BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048724
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 163/297 (54%), Gaps = 30/297 (10%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++ +I L+I+ +I G++GTV+R + G DVAVKIL M A + F
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL------MEQDFHAERVN-EFL 82
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+EVA+ ++L HPN+ F+GA NL I V EYL G+L
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSI--------------------VTEYLSRGSLY 122
Query: 198 KFLIRN-KRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLLDANRTLKIAD 254
+ L ++ R++L + + +A D+A+G++YLH++ IVHRD+K+ N+L+D T+K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG++R++A GT +MAPEVL +P N K DVYSFG+ LWE+ P+ +L
Sbjct: 183 FGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+ V +AV + R +IPR +A+I+ CW P KRP ++ LL + S
Sbjct: 243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 162/294 (55%), Gaps = 30/294 (10%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++ +I L+I+ +I G++GTV+R + G DVAVKIL M A + F
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL------MEQDFHAERVN-EFL 82
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+EVA+ ++L HPN+ F+GA NL I V EYL G+L
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSI--------------------VTEYLSRGSLY 122
Query: 198 KFLIRN-KRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLLDANRTLKIAD 254
+ L ++ R++L + + +A D+A+G++YLH++ IVHR++K+ N+L+D T+K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG++R++A GT +MAPEVL +P N K DVYSFG+ LWE+ P+ +L
Sbjct: 183 FGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ V +AV + R +IPR +A+I+ CW P KRP ++ LL +
Sbjct: 243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 160/301 (53%), Gaps = 39/301 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 4 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 56 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 94
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K K +I IA ARG+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 95 YHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 153
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 154 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R +L PD+ + CP + +M +C D+RP ++ +E
Sbjct: 214 SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
Query: 368 V 368
+
Sbjct: 274 L 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 159/301 (52%), Gaps = 39/301 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 16 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 67
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 106
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K K +I IA ARG+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 107 YHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 165
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A +++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R +L PD+ + CP + +M +C D+RP ++ +E
Sbjct: 226 SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
Query: 368 V 368
+
Sbjct: 286 L 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 39/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F+
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-FK 68
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 69 NEVGVLRKTRHVNILLFMGYS-------------------TAPQLA--IVTQWCEGSSLY 107
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
L K K +I IA ARG+ YLH+K+I+HRD+K+ N+ L + T+KI DFG+
Sbjct: 108 HHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGL 166
Query: 258 ARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
A +++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
Query: 313 DLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+++ D + V R +L PD+ + CP + +M +C D+RP ++ +E +
Sbjct: 227 NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 79
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 118
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 119 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 178 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 238 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
Query: 368 VNTS 371
+ S
Sbjct: 298 LARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 56
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 96 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 215 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
Query: 368 VNTS 371
+ S
Sbjct: 275 LARS 278
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 5 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 56
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 96 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 215 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
Query: 368 VNTS 371
+ S
Sbjct: 275 LARS 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 27 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 78
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 79 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 117
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 118 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 176
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 177 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 237 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 296
Query: 368 VNTS 371
+ S
Sbjct: 297 LARS 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 53
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 54 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 92
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 93 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 151
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 152 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 212 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 271
Query: 368 VNTS 371
+ S
Sbjct: 272 LARS 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 161/303 (53%), Gaps = 39/303 (12%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-FK 52
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYS-------------------TAPQLA--IVTQWCEGSSLY 91
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG+
Sbjct: 92 HHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 258 ARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 313 DLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 369 NTS 371
S
Sbjct: 271 ARS 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 161/303 (53%), Gaps = 39/303 (12%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-FK 52
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSLY 91
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG+
Sbjct: 92 HHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 258 ARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
A V+++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 313 DLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 369 NTS 371
S
Sbjct: 271 ARS 273
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 39/301 (12%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
WEIE +++ + I G++GTVY+G + G DVAVKIL V +A FR E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK------VVDPTPEQFQA-FRNE 82
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
VAV +K H N+ F+G M NL +V ++ G +L K
Sbjct: 83 VAVLRKTRHVNILLFMGY-MTKDNL--------------------AIVTQWCEGSSLYKH 121
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L + K F++ I IA A+G+ YLH+K I+HRD+K+ N+ L T+KI DFG+A
Sbjct: 122 LHVQETKFQMFQL-IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180
Query: 260 VEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
V+++ + + TG++ +MAPEV+ D P++ + DVYS+GI L+E+ ++PY +
Sbjct: 181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
Query: 315 SFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNT 370
+ D + V R PD+ + CP ++ ++ C ++RP+ +++ +E +
Sbjct: 241 NNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
Query: 371 S 371
S
Sbjct: 301 S 301
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 161/304 (52%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 28 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 79
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 118
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 119 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A +++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 178 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 238 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
Query: 368 VNTS 371
+ S
Sbjct: 298 LARS 301
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 161/304 (52%), Gaps = 39/304 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F
Sbjct: 20 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-F 71
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 72 KNEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSL 110
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG
Sbjct: 111 YHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 169
Query: 257 VARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+A +++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 170 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
Query: 312 PDLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E
Sbjct: 230 SNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 289
Query: 368 VNTS 371
+ S
Sbjct: 290 LARS 293
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 39/303 (12%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WEI ++ + I G++GTVY+G + G DVAVK+L+ VT+ ++A F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN------VTAPTPQQLQA-FK 52
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
EV V +K H N+ F+G S + P A +V ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYS-------------------TKPQLA--IVTQWCEGSSLY 91
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
L K +I IA A+G+ YLH+K+I+HRD+K+ N+ L + T+KI DFG+
Sbjct: 92 HHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 258 ARVEAQ--NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
A +++ +G++ +MAPEV+ D PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 313 DLSFTD-VSSAVVRQNLRPDIPRC---CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+++ D + V R L PD+ + CP ++ +M +C D+RP+ +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 369 NTS 371
S
Sbjct: 271 ARS 273
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
EI+ A+L + I G +G VYR + G +VAVK D ++ + RQE
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQT-----IENVRQEA 57
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++ L HPN+ G + NL C+V+E+ GG L + L
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNL--------------------CLVMEFARGGPLNRVL 97
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIV---HRDVKTENMLLD--------ANRT 249
K++ +++ A+ +ARG++YLH + IV HRD+K+ N+L+ +N+
Sbjct: 98 ---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154
Query: 250 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
LKI DFG+AR E M+ G +MAPEV+ +++ DV+S+G+ LWE+ ++
Sbjct: 155 LKITDFGLAR-EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
Query: 310 PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
P+ + V+ V L IP CP A +M CW+ +P RP ++ L +
Sbjct: 213 PFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I ++E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I ++E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 58
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I ++E++ G L
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 98
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 159 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 212 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 62
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 62
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I ++E++ G L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 45/303 (14%)
Query: 75 RKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ ++WE+E + ++H++ G YG VY G + + V + ED M
Sbjct: 22 QSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-------- 73
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F +E AV +++ HPN+ + +G L+ P +V EY+P G
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVC----TLEPPFY----------------IVTEYMPYG 113
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L +L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+AD
Sbjct: 114 NLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVAD 173
Query: 255 FGVARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
FG++R+ MTG+T T + + APE L ++ K DV++FG+ LWEI
Sbjct: 174 FGLSRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 307 CDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
M PYP + + V ++ + R + P CP + +MR CW +P RP E +
Sbjct: 227 YGMSPYPGIDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAF 285
Query: 366 EAV 368
E +
Sbjct: 286 ETM 288
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 55
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I ++E++ G L
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 95
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 264
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 304
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HR++ N L+ N +K+ADFG+
Sbjct: 305 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 364
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 365 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 418 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 62
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 59
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 99
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 62
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 58
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 98
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 159 SRL-------MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 212 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 70
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 110
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 170
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 171 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 224 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 62
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 59
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 99
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 61
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 101
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 161
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 162 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 215 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 59
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 99
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 303
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 343
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HR++ N L+ N +K+ADFG+
Sbjct: 344 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 403
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 404 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 456
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 457 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 261
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 301
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HR++ N L+ N +K+ADFG+
Sbjct: 302 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 361
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 362 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 414
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 415 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 46/292 (15%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
I+ ++++ + RG +G V + + +DVA+K + E+ + R +F E+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-----------ESESERKAFIVELR 54
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+++HPN+ K GA + C+V+EY GG+L L
Sbjct: 55 QLSRVNHPNIVKLYGACLNPV----------------------CLVMEYAEGGSLYNVL- 91
Query: 202 RNKRKKLAFKVV---IQIALDLARGLSYLHS---KTIVHRDVKTENMLLDANRT-LKIAD 254
+ + L + + L ++G++YLHS K ++HRD+K N+LL A T LKI D
Sbjct: 92 -HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG A + Q MT G+ +MAPEV +G Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 151 FGTA-CDIQT--HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
Query: 315 SFTDVSSA-VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
V RP + + P + S+M +CW +P +RP M+E+VK++
Sbjct: 208 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 46/292 (15%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
I+ ++++ + RG +G V + + +DVA+K + E+ + R +F E+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-----------ESESERKAFIVELR 53
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+++HPN+ K GA + C+V+EY GG+L L
Sbjct: 54 QLSRVNHPNIVKLYGACLNPV----------------------CLVMEYAEGGSLYNVL- 90
Query: 202 RNKRKKLAFKVV---IQIALDLARGLSYLHS---KTIVHRDVKTENMLLDANRT-LKIAD 254
+ + L + + L ++G++YLHS K ++HRD+K N+LL A T LKI D
Sbjct: 91 -HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG A + Q MT G+ +MAPEV +G Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 150 FGTA-CDIQT--HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
Query: 315 SFTDVSSA-VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
V RP + + P + S+M +CW +P +RP M+E+VK++
Sbjct: 207 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 55
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 95
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 57
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 97
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R+++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++WE+E + ++H++ G +G VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------EFL 55
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E AV +++ HPN+ + +G I + E++ G L
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 95
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R++++ V++ +A ++ + YL K +HRD+ N L+ N +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 258 ARVEAQNPRDMTGETGT--------LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+R+ MTG+T T + + APE L ++ K DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PYP + + V ++ ++ R + P CP + +MR CW NP RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++W + L + +I RG +G V+ G + V + E ++A F
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE------TLPPDLKAKFL 160
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
QE + ++ HPN+ + IG + I V+E + GG
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYI--------------------VMELVQGGDFL 200
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL R + +L K ++Q+ D A G+ YL SK +HRD+ N L+ LKI+DFG+
Sbjct: 201 TFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM 259
Query: 258 ARVEAQNPRDMTG--ETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDL 314
+R EA +G + + APE L+ Y+ + DV+SFGI LWE + PYP+L
Sbjct: 260 SREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
S + V + R P CP ++ +M +CW P +RP + + L+++
Sbjct: 320 S-NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
++W + L + +I RG +G V+ G + V + E ++A F
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE------TLPPDLKAKFL 160
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
QE + ++ HPN+ + IG + I V+E + GG
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYI--------------------VMELVQGGDFL 200
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL R + +L K ++Q+ D A G+ YL SK +HRD+ N L+ LKI+DFG+
Sbjct: 201 TFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM 259
Query: 258 ARVEAQNPRDMTG--ETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDL 314
+R EA +G + + APE L+ Y+ + DV+SFGI LWE + PYP+L
Sbjct: 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
S + V + R P CP ++ +M +CW P +RP + + L+++
Sbjct: 320 S-NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
W + + +L + I +G +G V G Y G VAVK + + A +F E
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 64
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+V +L H N+ + +G + +V EY+ G+L +
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 105
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L R L +++ +LD+ + YL VHRD+ N+L+ + K++DFG+ +
Sbjct: 106 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
Query: 260 VEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPDLSF 316
EA + +D TG L + APE L K ++ K DV+SFGI LWEIY +PYP +
Sbjct: 166 -EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 220
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
DV V + + D P CP ++ +M+ CW + RP ++ + LE + T +
Sbjct: 221 KDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
W + + +L + I +G +G V G Y G VAVK + + A +F E
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 236
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+V +L H N+ + +G + +V EY+ G+L +
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 277
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L R L +++ +LD+ + YL VHRD+ N+L+ + K++DFG+ +
Sbjct: 278 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
Query: 260 VEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPDLSF 316
EA + +D TG L + APE L K ++ K DV+SFGI LWEIY +PYP +
Sbjct: 338 -EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 392
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
DV V + + D P CP ++ +M+ CW + RP ++ + LE + T +
Sbjct: 393 KDVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 87
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 88 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 127
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX 187
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 188 XSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 248 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
W + + +L + I +G +G V G Y G VAVK + + A +F E
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 49
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+V +L H N+ + +G + +V EY+ G+L +
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 90
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L R L +++ +LD+ + YL VHRD+ N+L+ + K++DFG+ +
Sbjct: 91 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
Query: 260 VEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPDLSF 316
EA + +D TG L + APE L K ++ K DV+SFGI LWEIY +PYP +
Sbjct: 151 -EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
DV V + + D P CP ++ +M+ CW + RP ++ + LE + T +
Sbjct: 206 KDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 83
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 84 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 123
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 244 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 86
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 87 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 126
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 187 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 247 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 88
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 89 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 128
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 249 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 107
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 108 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 147
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 208 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 268 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 319
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 106
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 107 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 146
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 207 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 267 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 318
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 85
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 86 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 125
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 186 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 246 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 88
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 89 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 128
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 249 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 80
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 81 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 120
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 181 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 241 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 87
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 88 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 127
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ YL SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 188 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 248 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 89
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 90 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 129
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 250 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
W + + +L + I +G +G V G Y G VAVK + + A +F E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 55
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+V +L H N+ + +G + +V EY+ G+L +
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 96
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L R L +++ +LD+ + YL VHRD+ N+L+ + K++DFG+ +
Sbjct: 97 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
Query: 260 VEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPDLSF 316
EA + +D TG L + APE L ++ K DV+SFGI LWEIY +PYP +
Sbjct: 157 -EASSTQD----TGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
DV V + + D P CP ++ +M+ CW + RP ++ + LE + T +
Sbjct: 212 KDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 88
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 89 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 128
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 249 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 93
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 94 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 133
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 194 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 254 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 305
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 89
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 90 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 129
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 250 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 147
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 148 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 187
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 308 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 86
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 87 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 126
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 187 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 247 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 93 IARGTYGTVYRGAY---DGQDV--AVKILDWAED-GMVTSAEAAAIRASFRQEVAVWQKL 146
I RG +G VY G DG+ + AVK L+ D G V+ F E + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ---------FLTEGIIMKDF 88
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV +G + + + VV+ Y+ G L+ F IRN+
Sbjct: 89 SHPNVLSLLGICLRSEG-------------------SPLVVLPYMKHGDLRNF-IRNETH 128
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEA 262
K +I L +A+G+ +L SK VHRD+ N +LD T+K+ADFG+AR E
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSS 321
+ + TG + +MA E L + + K DV+SFG+ LWE+ PYPD++ D++
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
++ Q R P CP L +M KCW + RP E+V + A+ ++ G
Sbjct: 249 YLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
I+ ++L EI G +G V+ G + +D VA+K T E A F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 53
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V KL HP + + G L C+V E++ G L +L
Sbjct: 54 EVMMKLSHPKLVQLYGVC--------------------LEQAPICLVFEFMEHGCLSDYL 93
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
R +R A + ++ + LD+ G++YL +++HRD+ N L+ N+ +K++DFG+ R
Sbjct: 94 -RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 261 EAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
+ T TGT + + +PEV Y+ K DV+SFG+ +WE++ +PY + S
Sbjct: 153 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
++V + R PR + + IM CW P+ RP +++ L A+ S
Sbjct: 211 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFR 137
+W I+ ++L EI G +G V+ G + +D VA+K T E A F
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFI 53
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E V KL HP + + G L C+V E++ G L
Sbjct: 54 EEAEVMMKLSHPKLVQLYGVC--------------------LEQAPICLVFEFMEHGCLS 93
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R +R A + ++ + LD+ G++YL ++HRD+ N L+ N+ +K++DFG+
Sbjct: 94 DYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 258 ARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPD 313
R + T TGT + + +PEV Y+ K DV+SFG+ +WE++ +PY +
Sbjct: 153 TRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
S ++V + R PR + + IM CW P+ RP +++ L + S
Sbjct: 211 RSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFR 137
+W I+ ++L EI G +G V+ G + +D VA+K T E A F
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFI 51
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E V KL HP + + G L C+V E++ G L
Sbjct: 52 EEAEVMMKLSHPKLVQLYGVC--------------------LEQAPICLVTEFMEHGCLS 91
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+L R +R A + ++ + LD+ G++YL ++HRD+ N L+ N+ +K++DFG+
Sbjct: 92 DYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 258 ARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPD 313
R + T TGT + + +PEV Y+ K DV+SFG+ +WE++ +PY +
Sbjct: 151 TRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
S ++V + R PR + + IM CW P+ RP +++ L + S
Sbjct: 209 RSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 39/305 (12%)
Query: 72 VLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAA 130
++PR + I+ ++L EI G +G V+ G + +D VA+K T E +
Sbjct: 14 LVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIKEGS 63
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
F +E V KL HP + + G L C+V E+
Sbjct: 64 MSEDDFIEEAEVMMKLSHPKLVQLYGVC--------------------LEQAPICLVFEF 103
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTL 250
+ G L +L R +R A + ++ + LD+ G++YL ++HRD+ N L+ N+ +
Sbjct: 104 MEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI 162
Query: 251 KIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC- 306
K++DFG+ R + T TGT + + +PEV Y+ K DV+SFG+ +WE++
Sbjct: 163 KVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 220
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PY + S ++V + R PR + + IM CW P+ RP +++ L
Sbjct: 221 GKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 279
Query: 367 AVNTS 371
+ S
Sbjct: 280 EIAES 284
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 149/295 (50%), Gaps = 45/295 (15%)
Query: 86 KLDIRHEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIR--ASFRQEVA 141
+++ +I +G +G V++G D VA+K L + + E I F++EV
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD----SEGETEMIEKFQEFQREVF 75
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L+HPN+ K G HN P R +V+E++P G L L+
Sbjct: 76 IMSNLNHPNIVKLYGLM-----------------HN--PPR---MVMEFVPCGDLYHRLL 113
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLL---DANRTL--KIAD 254
+K + + V +++ LD+A G+ Y+ ++ IVHRD+++ N+ L D N + K+AD
Sbjct: 114 -DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVL--DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
FG+++ Q+ ++G G +MAPE + + + Y K D YSF + L+ I + P+
Sbjct: 173 FGLSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 DLSFTDVS--SAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ S+ + + + + LRP IP CP L +++ CW +P KRP +VK L
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
I+ ++L EI G +G V+ G + +D VA+K T E A F +E
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 51
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V KL HP + + G L C+V E++ G L +L
Sbjct: 52 EVMMKLSHPKLVQLYGVC--------------------LEQAPICLVFEFMEHGCLSDYL 91
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
R +R A + ++ + LD+ G++YL ++HRD+ N L+ N+ +K++DFG+ R
Sbjct: 92 -RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 261 EAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
+ T TGT + + +PEV Y+ K DV+SFG+ +WE++ +PY + S
Sbjct: 151 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
++V + R PR + + IM CW P+ RP +++ L + S
Sbjct: 209 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
I+ ++L EI G +G V+ G + +D VA+K T E A F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 53
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V KL HP + + G L C+V E++ G L +L
Sbjct: 54 EVMMKLSHPKLVQLYGVC--------------------LEQAPICLVFEFMEHGCLSDYL 93
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
R +R A + ++ + LD+ G++YL ++HRD+ N L+ N+ +K++DFG+ R
Sbjct: 94 -RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 261 EAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
+ T TGT + + +PEV Y+ K DV+SFG+ +WE++ +PY + S
Sbjct: 153 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
++V + R PR + + IM CW P+ RP +++ L + S
Sbjct: 211 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 45/295 (15%)
Query: 86 KLDIRHEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIR--ASFRQEVA 141
+++ +I +G +G V++G D VA+K L + + E I F++EV
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD----SEGETEMIEKFQEFQREVF 75
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L+HPN+ K G HN P R +V+E++P G L L+
Sbjct: 76 IMSNLNHPNIVKLYGLM-----------------HN--PPR---MVMEFVPCGDLYHRLL 113
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLL---DANRTL--KIAD 254
+K + + V +++ LD+A G+ Y+ ++ IVHRD+++ N+ L D N + K+AD
Sbjct: 114 -DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVL--DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
FG ++ Q+ ++G G +MAPE + + + Y K D YSF + L+ I + P+
Sbjct: 173 FGTSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 DLSFTDVS--SAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ S+ + + + + LRP IP CP L +++ CW +P KRP +VK L
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 66
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 123
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI D
Sbjct: 124 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 174 FGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP+ RP E+V LL+
Sbjct: 234 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 41/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 68
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V ++ + +V + +G S G L V++E + G
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------------------VIMELMTRG 107
Query: 195 TLKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 108 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 166
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWE
Sbjct: 167 EDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 304 I-YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I + PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 227 IATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 59
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 60 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 99
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 100 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 158
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 219 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P + + WEI L + ++ G +G V+ Y+ VAVK + S EA
Sbjct: 171 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEA--- 223
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F E V + L H + K H + ++ E++
Sbjct: 224 ---FLAEANVMKTLQHDKLVKL---------------------HAVVTKEPIYIITEFMA 259
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL ++ K +I + +A G++++ + +HRD++ N+L+ A+ KI
Sbjct: 260 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 319
Query: 253 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPY 311
ADFG+ARV A+ P + + APE ++ + K DV+SFGI L EI +PY
Sbjct: 320 ADFGLARVGAKFP---------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
P +S +V A+ R P P CP L +IM +CW P++RP + + +L+ T+
Sbjct: 371 PGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 63
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 120
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI D
Sbjct: 121 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 170
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 171 FGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP RP E+V LL+
Sbjct: 231 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 66
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 123
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI D
Sbjct: 124 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 174 FGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP RP E+V LL+
Sbjct: 234 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVR 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 95 GELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 154 DFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 214 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 5 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVR 58
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 98 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 156
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 157 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + P +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 217 QGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVR 60
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 99
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 100 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 158
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 159 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 219 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVR 435
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 474
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 475 GELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 533
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + P +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 594 QGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P + + WEI L + ++ G +G V+ Y+ VAVK + S EA
Sbjct: 177 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEA--- 229
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F E V + L H + K H + ++ E++
Sbjct: 230 ---FLAEANVMKTLQHDKLVKL---------------------HAVVTKEPIYIITEFMA 265
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL ++ K +I + +A G++++ + +HRD++ N+L+ A+ KI
Sbjct: 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 325
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+ARV N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 326 ADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+PYP +S +V A+ R P P CP L +IM +CW P++RP + + +L+
Sbjct: 384 IPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
Query: 369 NTS 371
T+
Sbjct: 443 YTA 445
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 30 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVR 83
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 122
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 123 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 181
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 182 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 242 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 4 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVR 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 96
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 97 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 155
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 156 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + P +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 216 QGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 45/295 (15%)
Query: 86 KLDIRHEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIR--ASFRQEVA 141
+++ +I +G +G V++G D VA+K L + + E I F++EV
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD----SEGETEMIEKFQEFQREVF 75
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L+HPN+ K G HN P R +V+E++P G L L+
Sbjct: 76 IMSNLNHPNIVKLYGLM-----------------HN--PPR---MVMEFVPCGDLYHRLL 113
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLL---DANRTL--KIAD 254
+K + + V +++ LD+A G+ Y+ ++ IVHRD+++ N+ L D N + K+AD
Sbjct: 114 -DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVL--DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
F +++ Q+ ++G G +MAPE + + + Y K D YSF + L+ I + P+
Sbjct: 173 FSLSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 313 DLSFTDVS--SAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ S+ + + + + LRP IP CP L +++ CW +P KRP +VK L
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 41/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 74
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V ++ + +V + +G S G L V++E + G
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------------------VIMELMTRG 113
Query: 195 TLKKFLIRNKRKKLA---------FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
LK +L R+ R +A +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 114 DLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 172
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWE
Sbjct: 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232
Query: 304 I-YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I + PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 233 IATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 66
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 123
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI D
Sbjct: 124 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 174 FGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP RP E+V LL+
Sbjct: 234 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVR 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 95 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 214 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 39/311 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 11 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 60
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 99
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 100 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 159
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 160 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 220 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
Query: 369 NTSKGGGMIPE 379
T+ G P+
Sbjct: 277 FTATEGQFQPQ 287
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVR 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+
Sbjct: 95 GELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 214 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 68
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 69 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 108
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 109 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 168 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 228 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 61
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 62 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 101
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 102 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 160
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 221 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 64
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 65 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 104
Query: 196 LKKFLIRNKRKKLA---------FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R +A +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 105 LKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 163
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 224 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 41/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 65
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V ++ + +V + +G S G L V++E + G
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------------------VIMELMTRG 104
Query: 195 TLKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 105 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 163
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWE
Sbjct: 164 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 223
Query: 304 I-YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I + PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 224 IATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 66
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 123
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI D
Sbjct: 124 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 173
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 174 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP RP E+V LL+
Sbjct: 234 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 39/311 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 10 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 59
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 98
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 99 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 158
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 159 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 219 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
Query: 369 NTSKGGGMIPE 379
T+ G P+
Sbjct: 276 FTATEGQYQPQ 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 67
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 68 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 107
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 108 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 41/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 74
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V ++ + +V + +G S G L V++E + G
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------------------VIMELMTRG 113
Query: 195 TLKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 114 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 172
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWE
Sbjct: 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232
Query: 304 I-YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I + PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 233 IATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 43/313 (13%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 12 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 61
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + ++ EY+
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAV---------------------VTQEPIYIITEYME 100
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 101 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 160
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+AR+ N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 161 ADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
Query: 309 MPYPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PYP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 219 IPYPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
Query: 367 AVNTSKGGGMIPE 379
T+ G P+
Sbjct: 276 DFFTATEGQYQPQ 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 67
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 68 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 107
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 108 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 227 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 39/311 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 51
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 90
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 211 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
Query: 369 NTSKGGGMIPE 379
T+ G P+
Sbjct: 268 FTATEGQYQPQ 278
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 39/299 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 96
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E +V ++ + +V + +G + SQ + V++E + G
Sbjct: 97 FLNEASVMKEFNCHHVVRLLG---------VVSQG-----------QPTLVIMELMTRGD 136
Query: 196 LKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N ++
Sbjct: 137 LKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 195
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWEI
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 305 -YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 256 ATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 39/311 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 8 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 57
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 96
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 97 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 156
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 157 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 217 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
Query: 369 NTSKGGGMIPE 379
T+ G P+
Sbjct: 274 FTATEGQYQPQ 284
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVR 435
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 474
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ A +K+
Sbjct: 475 GELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLG 533
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + P +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 594 QGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P + + WEI L + ++ G +G V+ Y+ VAVK + S EA
Sbjct: 4 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEA--- 56
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F E V + L H + K H + ++ E++
Sbjct: 57 ---FLAEANVMKTLQHDKLVKL---------------------HAVVTKEPIYIITEFMA 92
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL ++ K +I + +A G++++ + +HRD++ N+L+ A+ KI
Sbjct: 93 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 152
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+ARV N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 153 ADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PYP +S +V A+ R P P CP L +IM +CW P++RP + + +L+
Sbjct: 211 IPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 67
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 124
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHR++ N ++ + T+KI D
Sbjct: 125 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGD 174
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 234
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP+ RP E+V LL+
Sbjct: 235 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 23/295 (7%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIE 66
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG- 123
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
R + +IQ+A ++A G++YL++K VHR++ N ++ + T+KI D
Sbjct: 124 ----------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGD 173
Query: 255 FGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPY 311
FG+ R + G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 174 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
LS V V+ D P CP + +MR CW NP+ RP E+V LL+
Sbjct: 234 QGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 34/295 (11%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIRAS 135
++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 54
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F QE ++ DHP++ K IG + +++E G
Sbjct: 55 FLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTLGE 93
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ +N +K+ DF
Sbjct: 94 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152
Query: 256 GVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPD 313
G++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 153 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + P +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 213 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 34/297 (11%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIR 133
T ++EI+ ++++ I G +G V++G Y + +AV I + + ++R
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVR 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F QE ++ DHP++ K IG + +++E
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGV---------------------ITENPVWIIMELCTL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G L+ FL + ++ L +I A L+ L+YL SK VHRD+ N+L+ A +K+
Sbjct: 95 GELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLG 153
Query: 254 DFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
DFG++R +E + + +MAPE ++ + + DV+ FG+C+WEI + P+
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ DV + R +P CP +L S+M KCW +P +RP E+ L +
Sbjct: 214 QGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 41/300 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--S 135
+EWE+ K+ + E+ +G++G VY G G VK + T EAA++R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 61
Query: 136 FRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E +V ++ + +V + +G S G L V++E + G
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------------------VIMELMTRG 100
Query: 195 TLKKFLIRNKRKKL---------AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
LK +L R+ R ++ + +IQ+A ++A G++YL++ VHRD+ N +
Sbjct: 101 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVA 159
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ T+KI DFG+ R + G G L +M+PE L + DV+SFG+ LWE
Sbjct: 160 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 304 I-YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I + PY LS V V+ L D P CP L +MR CW NP RP E++
Sbjct: 220 IATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 141/298 (47%), Gaps = 43/298 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQD-----VAVKILDWAEDGMVTSAEAAAIRAS 135
EI+++ + I I G +G V RG VA+K L G T + R
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQ----RRE 63
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E ++ + +HPN+ + G NS+P ++ E++ G
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVT-----------------NSMP---VMILTEFMENGA 103
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L FL N + ++V + +A G+ YL + VHRD+ N+L+++N K++DF
Sbjct: 104 LDSFLRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDF 162
Query: 256 GVARVEAQNPRDMTGETGTLG------YMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
G++R +N D T ET +LG + APE + + + D +S+GI +WE+ +
Sbjct: 163 GLSRFLEENSSDPT-ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 221
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PY D+S DV +A + Q+ R P CP+SL +M CW + + RP +VV L+
Sbjct: 222 RPYWDMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 35/291 (12%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
E++ ++ + E+ G +G V G + GQ DVAVK++ E + F QE
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI----------KEGSMSEDEFFQE 53
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
KL HP + KF G + I V EY+ G L +
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYI--------------------VTEYISNGCLLNY 93
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
L R+ K L ++++ D+ G+++L S +HRD+ N L+D + +K++DFG+ R
Sbjct: 94 L-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
Query: 260 VEAQNPR-DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
+ G + + APEV Y+ K DV++FGI +WE++ MPY DL
Sbjct: 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYTN 211
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
V Q R P ++ IM CW P+KRP +++ +E +
Sbjct: 212 SEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 3 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 52
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 91
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 92 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 151
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 152 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 212 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
Query: 369 NTS 371
T+
Sbjct: 269 FTA 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 4 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 53
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 54 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 92
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 93 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 152
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 153 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 213 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
Query: 369 NTS 371
T+
Sbjct: 270 FTA 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 51
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 90
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 211 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
Query: 369 NTS 371
T+
Sbjct: 268 FTA 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 43/305 (14%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 7 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 56
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + ++ EY+
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAV---------------------VTQEPIYIITEYME 95
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 96 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 155
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+AR+ N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 156 ADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
Query: 309 MPYPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PYP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 214 IPYPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
Query: 367 AVNTS 371
T+
Sbjct: 271 DFFTA 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 43/305 (14%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 8 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 57
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + ++ EY+
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAV---------------------VTQEPIYIITEYME 96
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 97 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 156
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+AR+ N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 157 ADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
Query: 309 MPYPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PYP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 215 IPYPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
Query: 367 AVNTS 371
T+
Sbjct: 272 DFFTA 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 43/305 (14%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P +EWE+ L + + G +G V+ G Y+G VAVK L + +
Sbjct: 2 PWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMS 51
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 90
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD- 308
ADFG+AR+ N + T G + + APE ++ + K DV+SFGI L EI
Sbjct: 151 ADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
Query: 309 MPYPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+PYP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 209 IPYPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
Query: 367 AVNTS 371
T+
Sbjct: 266 DFFTA 270
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 36/257 (14%)
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
+F +EV V + L+HPNV KFIG L + EY+ GG
Sbjct: 53 TFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF--------------------ITEYIKGG 92
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
TL+ +I++ + + + A D+A G++YLHS I+HRD+ + N L+ N+ + +AD
Sbjct: 93 TLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVAD 151
Query: 255 FGVARV---EAQNPRDMTG-----------ETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
FG+AR+ E P + G +MAPE+++G+ Y+ K DV+SFGI
Sbjct: 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
Query: 301 LWEIYCCDMPYPD-LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
L EI PD L T VR L P CP S I +C D +P+KRP
Sbjct: 212 LCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFV 271
Query: 360 EVVKLLEAVNTSKGGGM 376
++ LE + G +
Sbjct: 272 KLEHWLETLRMHLAGHL 288
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 138/301 (45%), Gaps = 43/301 (14%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASF 136
+EWE+ L + + G +G V+ G Y+G VAVK L + + +F
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMSPDAF 50
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
E + ++L H + + + + ++ EY+ G+L
Sbjct: 51 LAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYMENGSL 89
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
FL KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG
Sbjct: 90 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 149
Query: 257 VARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYP 312
+AR+ N + T G + + APE ++ + K DV+SFGI L EI +PYP
Sbjct: 150 LARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 207
Query: 313 DLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNT 370
++ +V + R + +RPD CP L +MR CW P+ RP D + +LE T
Sbjct: 208 GMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 264
Query: 371 S 371
+
Sbjct: 265 A 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQD-----VAVKILDWAEDGMVTSAEAAAIRAS 135
EI+++ + I I G +G V RG VA+K L G T + R
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQ----RRE 61
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E ++ + +HPN+ + G NS+P ++ E++ G
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVT-----------------NSMP---VMILTEFMENGA 101
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L FL N + ++V + +A G+ YL + VHRD+ N+L+++N K++DF
Sbjct: 102 LDSFLRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDF 160
Query: 256 GVARVEAQNPRDMTGETGTLG------YMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
G++R +N D T T +LG + APE + + + D +S+GI +WE+ +
Sbjct: 161 GLSRFLEENSSDPT-YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 219
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PY D+S DV +A + Q+ R P CP+SL +M CW + + RP +VV L+
Sbjct: 220 RPYWDMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 72 VLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAE 128
++PR + ++ I + + + G +G VY G Y G+ + V + +D + + E
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 70
Query: 129 AAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
F E + + LDHP++ K IG + +++
Sbjct: 71 ------KFMSEAVIMKNLDHPHIVKLIGI---------------------IEEEPTWIIM 103
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
E P G L +L RNK L ++ +L + + ++YL S VHRD+ N+L+ +
Sbjct: 104 ELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE 162
Query: 249 TLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC 307
+K+ DFG++R +E ++ + + +M+PE ++ + + DV+ F +C+WEI
Sbjct: 163 CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 222
Query: 308 -DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
P+ L DV + + + P P CP L ++M +CWD +P RP E+V
Sbjct: 223 GKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I +G +G VY G Y Q A + A + E + A F +E + + L+HPNV
Sbjct: 29 IGKGHFGVVYHGEYIDQ--AQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGLNHPNVL 85
Query: 153 KFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKV 212
IG + +P + LP V++ Y+ G L +F IR+ ++ K
Sbjct: 86 ALIG-------IMLPPEG--------LPH----VLLPYMCHGDLLQF-IRSPQRNPTVKD 125
Query: 213 VIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR----VEAQNPRDM 268
+I L +ARG+ YL + VHRD+ N +LD + T+K+ADFG+AR E + +
Sbjct: 126 LISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH 185
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
+ + A E L + K DV+SFG+ LWE+ PY + D++ + +
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR 245
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
P P CP SL +M++CW+A+P RP +V +E + ++ G
Sbjct: 246 RLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 39/311 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P + WE+ L + + G G V+ G Y+G VAVK L + +
Sbjct: 2 PWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK----------QGSMS 51
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F E + ++L H + + + + ++ EY+
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYME 90
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL KL ++ +A +A G++++ + +HRD++ N+L+ + KI
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150
Query: 253 ADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MP 310
ADFG+AR +E G + + APE ++ + K DV+SFGI L EI +P
Sbjct: 151 ADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 311 YPDLSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
YP ++ +V + R + +RPD CP L +MR CW P+ RP D + +LE
Sbjct: 211 YPGMTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
Query: 369 NTSKGGGMIPE 379
T+ G P+
Sbjct: 268 FTATEGQYQPQ 278
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 35/295 (11%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V+EY+ G+L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 R-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
R +E G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 222 REVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V+EY+ G+L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFR 137
EWE+ L + + G +G V+ G Y+G VAVK L + + +F
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----------QGSMSPDAFL 52
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E + ++L H + + + + ++ EY+ G+L
Sbjct: 53 AEANLMKQLQHQRLVRL---------------------YAVVTQEPIYIITEYMENGSLV 91
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL KL ++ +A +A G++++ + +HR+++ N+L+ + KIADFG+
Sbjct: 92 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGL 151
Query: 258 ARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPD 313
AR+ N + T G + + APE ++ + K DV+SFGI L EI +PYP
Sbjct: 152 ARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
Query: 314 LSFTDVSSAVVR--QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
++ +V + R + +RPD CP L +MR CW P+ RP D + +LE T+
Sbjct: 210 MTNPEVIQNLERGYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 311
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + +V EY+ G+L
Sbjct: 312 EAQVMKKLRHEKLVQLYAV---------------------VSEEPIYIVTEYMSKGSLLD 350
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 411 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 469 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 23/292 (7%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA--SFRQ 138
E+ K+ + E+ +G++G VY G + +D+ +K + T E+A++R F
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEFLN 68
Query: 139 EVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E +V + +V + +G S G L + A D + L R+ E PG
Sbjct: 69 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPG---- 122
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
R + +IQ+A ++A G++YL++K VHRD+ N ++ + T+KI DFG+
Sbjct: 123 -------RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM 175
Query: 258 ARVEAQNPRDMTGETGTLG--YMAPEVLDGKPYNRKCDVYSFGICLWEIY-CCDMPYPDL 314
R + G G L +MAPE L + D++SFG+ LWEI + PY L
Sbjct: 176 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 235
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
S V V+ D P CP + +MR CW NP RP E+V LL+
Sbjct: 236 SNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 35/295 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQ-DVAVKILDWAEDGMVTSAEAAAIRASFR 137
EIE +++ I I G G V G GQ DV V I + + R F
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI------KALKAGYTERQRRDFL 98
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E ++ + DHPN+ + G R +V EY+ G+L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVT--------------------RGRLAMIVTEYMENGSLD 138
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL R + ++ + + G+ YL VHRD+ N+L+D+N K++DFG+
Sbjct: 139 TFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 258 ARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPD 313
+RV +P TG + + APE + + ++ DV+SFG+ +WE+ + PY +
Sbjct: 198 SRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
++ DV S+ V + R P CP +L +M CW + +RP ++V +L+A+
Sbjct: 258 MTNRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 35/295 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQ-DVAVKILDWAEDGMVTSAEAAAIRASFR 137
EIE +++ I I G G V G GQ DV V I + + R F
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI------KALKAGYTERQRRDFL 98
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E ++ + DHPN+ + G R +V EY+ G+L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVT--------------------RGRLAMIVTEYMENGSLD 138
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL R + ++ + + G+ YL VHRD+ N+L+D+N K++DFG+
Sbjct: 139 TFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 258 ARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPD 313
+RV +P TG + + APE + + ++ DV+SFG+ +WE+ + PY +
Sbjct: 198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
++ DV S+ V + R P CP +L +M CW + +RP ++V +L+A+
Sbjct: 258 MTNRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L + G + S EA F Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTM-SPEA------FLQ 228
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + +V EY+ G+L
Sbjct: 229 EAQVMKKLRHEKLVQLYAV---------------------VSEEPIYIVTEYMSKGSLLD 267
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 328 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 386 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L + G + S EA F Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL---KPGTM-SPEA------FLQ 228
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + +V EY+ G+L
Sbjct: 229 EAQVMKKLRHEKLVQLYAV---------------------VSEEPIYIVTEYMSKGSLLD 267
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 328 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 386 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 56/319 (17%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA T D V+VE
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGA-------------CTQDG-------PLYVIVE 121
Query: 190 YLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSKTIVH 234
Y G L+++L R +R +++ FK ++ LARG+ YL S+ +H
Sbjct: 122 YASKGNLREYL-RARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
Query: 235 RDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
RD+ N+L+ N +KIADFG+AR + T + +MAPE L + Y +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 293 DVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDAN 351
DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR CW A
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 352 PDKRPVMDEVVKLLEAVNT 370
P +RP ++V+ L+ + T
Sbjct: 300 PSQRPTFKQLVEDLDRILT 318
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 51
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 52 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 90
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 91 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 151 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 208
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 209 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 35/295 (11%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 52
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 53 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIXIVTEYMSKGSLLD 91
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151
Query: 259 R-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
R +E G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 152 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 212 REVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 53
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 54 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 93 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 152
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 153 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 210
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 211 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 56/319 (17%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA T D V+VE
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGA-------------CTQDG-------PLYVIVE 121
Query: 190 YLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSKTIVH 234
Y G L+++L R +R +++ FK ++ LARG+ YL S+ +H
Sbjct: 122 YASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
Query: 235 RDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
RD+ N+L+ N +KIADFG+AR ++ T + +MAPE L + Y +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 293 DVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDAN 351
DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR CW A
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 352 PDKRPVMDEVVKLLEAVNT 370
P +RP ++V+ L+ + T
Sbjct: 300 PSQRPTFKQLVEDLDRILT 318
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 38/306 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAI 132
P + WEI + + + G +G V+ G Y+ VAVK L + G ++
Sbjct: 2 PWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQ----- 53
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+F +E + + L H + + + I + EY+
Sbjct: 54 --AFLEEANLMKTLQHDKLVRLYAVVTREEPIYI--------------------ITEYMA 91
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL ++ K+ +I + +A G++Y+ K +HRD++ N+L+ + KI
Sbjct: 92 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 151
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
ADFG+ARV N + T G + + APE ++ + K DV+SFGI L+EI
Sbjct: 152 ADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+PYP + DV +A+ + P + CP L IM+ CW ++RP D + +L+
Sbjct: 210 IPYPGRTNADVMTALSQGYRMPRVEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 268
Query: 369 NTSKGG 374
T+ G
Sbjct: 269 YTATEG 274
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 56/319 (17%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA T D V+VE
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGA-------------CTQDG-------PLYVIVE 121
Query: 190 YLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSKTIVH 234
Y G L+++L R +R +++ FK ++ LARG+ YL S+ +H
Sbjct: 122 YASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
Query: 235 RDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
RD+ N+L+ N +KIADFG+AR + T + +MAPE L + Y +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 293 DVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDAN 351
DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR CW A
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 352 PDKRPVMDEVVKLLEAVNT 370
P +RP ++V+ L+ + T
Sbjct: 300 PSQRPTFKQLVEDLDRILT 318
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 55
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 56 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 94
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 95 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 154
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 155 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 212
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R P P CP SL +M +CW P++RP + + LE TS
Sbjct: 213 VNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVCEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 147/324 (45%), Gaps = 66/324 (20%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKIL--DWAEDGMVTSA 127
+WE KL + + G +G V G D VAVK+L D E+ +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDL---- 84
Query: 128 EAAAIRASFRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCV 186
+ E+ + + + H N+ +GA T D V
Sbjct: 85 ------SDLVSEMEMMKMIGKHKNIINLLGA-------------CTQDG-------PLYV 118
Query: 187 VVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSKT 231
+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 119 IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGKP 287
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 288 YNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRD 294
Query: 347 CWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 89 IRHEIARGTYGTVYRG-AYDGQDVAVKILDWAEDGMVTSAEAA-----AIRASFRQEVAV 142
++ E+ G +G V+ Y+ L +D M+ + +A A R F++E +
Sbjct: 19 LKRELGEGAFGKVFLAECYN--------LSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 143 WQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL-- 200
L H ++ KF G L +V EY+ G L KFL
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPL--------------------IMVFEYMKHGDLNKFLRA 110
Query: 201 ------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
R + +L ++ IA +A G+ YL S+ VHRD+ T N L+ AN
Sbjct: 111 HGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 170
Query: 249 TLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+KI DFG++R V + + + G T + +M PE + + + + DV+SFG+ LWEI+
Sbjct: 171 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
P+ LS T+V + Q + PR CP + +M CW P +R + E+ K+L
Sbjct: 231 YGKQPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
Query: 366 EAVNTS 371
A+ +
Sbjct: 290 HALGKA 295
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V+EY+ G L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVMEYMSKGCLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R P P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 93 IARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G +G VY G Y G+ + V + +D + + E F E + + LDHP
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE------KFMSEAVIMKNLDHP 69
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
++ K IG + +++E P G L +L RNK L
Sbjct: 70 HIVKLIGI---------------------IEEEPTWIIMELYPYGELGHYLERNK-NSLK 107
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDM 268
++ +L + + ++YL S VHRD+ N+L+ + +K+ DFG++R +E ++
Sbjct: 108 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQN 327
+ + +M+PE ++ + + DV+ F +C+WEI P+ L DV + + +
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 227
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
P P CP L ++M +CWD +P RP E+V
Sbjct: 228 RLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 18 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 69
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + +++EY P
Sbjct: 70 HQLRREVEIQSHLRHPNILRLYGYFHDATRV--------------------YLILEYAPL 109
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 110 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 167
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 168 DFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 226 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 93 IARGTYGTVYRGAY---DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G +G VY G Y G+ + V + +D + + E F E + + LDHP
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE------KFMSEAVIMKNLDHP 73
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
++ K IG + +++E P G L +L RNK L
Sbjct: 74 HIVKLIGI---------------------IEEEPTWIIMELYPYGELGHYLERNK-NSLK 111
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDM 268
++ +L + + ++YL S VHRD+ N+L+ + +K+ DFG++R +E ++
Sbjct: 112 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQN 327
+ + +M+PE ++ + + DV+ F +C+WEI P+ L DV + + +
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
P P CP L ++M +CWD +P RP E+V
Sbjct: 232 RLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +K+ H + + + + +V EY+ G+L
Sbjct: 63 EAQVMKKIRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 27 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 78
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 118
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 119 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 177 DFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 235 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGCLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R P P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVERGYRMPCPPE-CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 63 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD+ N+L+ N K+ADFG+A
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLA 161
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 162 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 220 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 228
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + +V EY+ G+L
Sbjct: 229 EAQVMKKLRHEKLVQLYAV---------------------VSEEPIYIVGEYMSKGSLLD 267
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 328 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 386 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 118 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 293
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGN----MSPEA------FLQ 229
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + +V EY+ G+L
Sbjct: 230 EAQVMKKLRHEKLVQLYAV---------------------VSEEPIYIVTEYMSKGSLLD 268
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ +A +A G++Y+ VHRD++ N+L+ N K+ADFG+
Sbjct: 269 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 329 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW +P++RP + + LE TS
Sbjct: 387 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 95
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 96 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 154 DFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 212 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD--GQD---VAVKILDWAEDGMVTSAEAAAIRAS 135
EI+++ + I I G +G V G G+ VA+K L S R
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL--------KSGYTEKQRRD 80
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E ++ + DHPNV G +T + I + E++ G+
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMI--------------------ITEFMENGS 120
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L FL +N + ++V + +A G+ YL VHRD+ N+L+++N K++DF
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 256 GVARVEAQNPRDMTGETGTLG------YMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
G++R + D T T LG + APE + + + DV+S+GI +WE+ +
Sbjct: 180 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PY D++ DV +A + Q+ R P CPS+L +M CW + + RP ++V L+
Sbjct: 239 RPYWDMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 118 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 293
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 6 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 98 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 156 DFGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 35/282 (12%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK----------EGSMSEDEFIE 68
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 108
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 109 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 259 R-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSF 316
R V G + + PEVL ++ K D+++FG+ +WEIY MPY +
Sbjct: 168 RYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 227
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
++ + + Q LR P + +IM CW D+RP
Sbjct: 228 SETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 110 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 168
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 169 KCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 227 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 285
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 286 DCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 107 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 165
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 166 KCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 224 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 282
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 283 DCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 6 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 98 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 156 DFGWS-VHAPSSRR-TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
WE+ +L + + G +G V G LD + VT A + S E
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIG-------LDKDKPNRVTKV-AVKMLKSDATE 74
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+ + + K IG NL + T D V+VEY G L+++
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINL---LGACTQDG-------PLYVIVEYASKGNLREY 124
Query: 200 L--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
L N ++L+ K ++ A +ARG+ YL SK +HRD+ N+L+
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 184
Query: 246 ANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
+ +KIADFG+AR + T + +MAPE L + Y + DV+SFG+ LWE
Sbjct: 185 EDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 244
Query: 304 IYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
I+ PYP + ++ ++++ R D P C + L +MR CW A P +RP ++V
Sbjct: 245 IFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 363 KLLEAV 368
+ L+ +
Sbjct: 304 EDLDRI 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 105 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 163
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 164 KCIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 222 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 280
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 281 DCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 59
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 60 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ ++ +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 159 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 217 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 48/316 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L++ + RG +G V G D VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 69 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 106
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKK-----------LAFKVVIQIALDLARGLSYLHSKTI 232
V+VE+ G L +L R+KR + L + +I + +A+G+ +L S+
Sbjct: 107 LMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX 165
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKPYNR 290
+HRD+ N+LL +KI DFG+AR ++P + L +MAPE + + Y
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 291 KCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 226 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
Query: 350 ANPDKRPVMDEVVKLL 365
P +RP E+V+ L
Sbjct: 286 GEPSQRPTFSELVEHL 301
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 95
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 96 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 154 DFGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 212 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQD-VAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + ++ +G +G V+ G ++G VA+K L S EA F Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEA------FLQ 59
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V +KL H + + + + +V EY+ G+L
Sbjct: 60 EAQVMKKLRHEKLVQL---------------------YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL K L ++ ++ +A G++Y+ VHRD++ N+L+ N K+ADFG+A
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDL 314
R+ N + T G + + APE + K DV+SFGI L E+ +PYP +
Sbjct: 159 RLIEDN--EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P CP SL +M +CW P++RP + + LE TS
Sbjct: 217 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 2 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 53
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 93
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 94 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + + RD GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 152 DFGWSVHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 210 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 2 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 53
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 93
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 94 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 152 DFGWS-VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 210 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 1 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 52
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 92
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 93 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 151 DFGWS-VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 209 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 35/295 (11%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI L + + G +G V+ G ++G VA+K L + G ++ SF +
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL---KPGTMSPE-------SFLE 53
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E + +KL H + + + + +V EY+ G+L
Sbjct: 54 EAQIMKKLKHDKLVQL---------------------YAVVSEEPIYIVTEYMNKGSLLD 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL + + L ++ +A +A G++Y+ +HRD+++ N+L+ KIADFG+A
Sbjct: 93 FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA 152
Query: 259 R-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSF 316
R +E G + + APE + K DV+SFGI L E+ +PYP ++
Sbjct: 153 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+V V R R P+ CP SL +M CW +P++RP + + LE T+
Sbjct: 213 REVLEQVER-GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTA 266
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----------KEGSMSEDEFIE 52
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 93 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDL 314
R + + T G+ + + PEVL ++ K D+++FG+ +WEIY MPY
Sbjct: 152 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 209
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ + + Q LR P + +IM CW D+RP
Sbjct: 210 TNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 186 VVVEYLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSK 230
V+VEY G L+++L R +R +++ FK ++ LARG+ YL S+
Sbjct: 164 VIVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGK 286
+HRD+ N+L+ N +KIADFG+AR N D +T + +MAPE L +
Sbjct: 223 KCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 287 PYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR
Sbjct: 281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMR 339
Query: 346 KCWDANPDKRPVMDEVVKLLEAVNT 370
CW A P +RP ++V+ L+ + T
Sbjct: 340 DCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----------KEGSMSEDEFIE 59
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 99
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 100 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDL 314
R + + T G+ + + PEVL ++ K D+++FG+ +WEIY MPY
Sbjct: 159 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 216
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ + + Q LR P + +IM CW D+RP
Sbjct: 217 TNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 73/329 (22%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 54
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 55 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 95
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
Query: 259 RVEAQNPRDM-----TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--Y 305
V + D GT YMAPEVLD K + ++ D+Y+ G+ WEI
Sbjct: 156 -VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
Query: 306 CC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKC 347
C +PY DL S ++ V Q LRP+IP + C + +A IMR+C
Sbjct: 215 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 274
Query: 348 WDANPDKRPVMDEVVKLLEAVNTSKGGGM 376
W AN R + K L ++ +G M
Sbjct: 275 WYANGAARLTALRIKKTLSQLSQQEGIKM 303
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 2 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 53
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + +++EY P
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRV--------------------YLILEYAPL 93
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 94 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + A + R T +GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 152 DFGWS-CHAPSSRRTT-LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 210 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK----------EGSMSEDEFIE 68
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 108
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 109 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDL 314
R + + T G+ + + PEVL ++ K D+++FG+ +WEIY MPY
Sbjct: 168 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ + + Q LR P + +IM CW D+RP
Sbjct: 226 TNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 146/321 (45%), Gaps = 60/321 (18%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA T D V+VE
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGA-------------CTQDG-------PLYVIVE 121
Query: 190 YLPGGTLKKFLIRNKR---------------KKLAFKVVIQIALDLARGLSYLHSKTIVH 234
Y G L+++L R +R +++ FK ++ LARG+ YL S+ +H
Sbjct: 122 YASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
Query: 235 RDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGKPYNR 290
RD+ N+L+ N ++IADFG+AR N D +T + +MAPE L + Y
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+SFG+ +WEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWH 297
Query: 350 ANPDKRPVMDEVVKLLEAVNT 370
A P +RP ++V+ L+ + T
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 6 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPR 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G + K L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 98 GEVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 156 DFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 162
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 223 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 281
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 282 HAVPSQRPTFKQLVEDLDRI 301
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 27 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 78
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + +++EY P
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRV--------------------YLILEYAPL 118
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 119 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + + RD GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 177 DFGWSVHAPSSRRDDL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 235 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 290 HAVPSQRPTFKQLVEDLDRI 309
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 6 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 98 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R T GTL Y+ PE ++G+ ++ K D++S G+ +E P+
Sbjct: 156 DFGWS-VHAPSSRRTT-LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP + EV++
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 159
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 220 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 278
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 279 HAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 290 HAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 163
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 224 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 282
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 283 HAVPSQRPTFKQLVEDLDRI 302
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 73/326 (22%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 55
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 56 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 96
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 97 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
Query: 259 RVEAQNPRDM-----TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--Y 305
V + D GT YMAPEVLD K + ++ D+Y+ G+ WEI
Sbjct: 157 -VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
Query: 306 CC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKC 347
C +PY DL S ++ V Q LRP+IP + C + +A IMR+C
Sbjct: 216 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 275
Query: 348 WDANPDKRPVMDEVVKLLEAVNTSKG 373
W AN R + K L ++ +G
Sbjct: 276 WYANGAARLTALRIKKTLSQLSQQEG 301
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----------KEGSMSEDEFIE 53
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 93
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 94 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDL 314
R + + T G+ + + PEVL ++ K D+++FG+ +WEIY MPY
Sbjct: 153 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ + + Q LR P + +IM CW D+RP
Sbjct: 211 TNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 73/329 (22%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 60
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 61 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 101
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 102 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
Query: 259 RVEAQNPRDM-----TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--Y 305
V + D GT YMAPEVLD K + ++ D+Y+ G+ WEI
Sbjct: 162 -VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
Query: 306 CC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKC 347
C +PY DL S ++ V Q LRP+IP + C + +A IMR+C
Sbjct: 221 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 280
Query: 348 WDANPDKRPVMDEVVKLLEAVNTSKGGGM 376
W AN R + K L ++ +G M
Sbjct: 281 WYANGAARLTALRIKKTLSQLSQQEGIKM 309
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 73/329 (22%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 57
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 58 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 98
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 99 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
Query: 259 RVEAQNPRDM-----TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--Y 305
V + D GT YMAPEVLD K + ++ D+Y+ G+ WEI
Sbjct: 159 -VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
Query: 306 CC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKC 347
C +PY DL S ++ V Q LRP+IP + C + +A IMR+C
Sbjct: 218 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 277
Query: 348 WDANPDKRPVMDEVVKLLEAVNTSKGGGM 376
W AN R + K L ++ +G M
Sbjct: 278 WYANGAARLTALRIKKTLSQLSQQEGIKM 306
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 73/326 (22%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 80
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 81 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 121
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 122 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
Query: 259 RVEAQNPRDM-----TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--Y 305
V + D GT YMAPEVLD K + ++ D+Y+ G+ WEI
Sbjct: 182 -VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
Query: 306 CC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKC 347
C +PY DL S ++ V Q LRP+IP + C + +A IMR+C
Sbjct: 241 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 300
Query: 348 WDANPDKRPVMDEVVKLLEAVNTSKG 373
W AN R + K L ++ +G
Sbjct: 301 WYANGAARLTALRIKKTLSQLSQQEG 326
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI+ L E+ G +G V G + GQ DVA+K++ E + F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----------KEGSMSEDEFIE 53
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E V L H + + G R ++ EY+ G L
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLN 93
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
+L R R + + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++
Sbjct: 94 YL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 259 RVEAQNPRDMT-GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSF 316
R + + G + + PEVL ++ K D+++FG+ +WEIY MPY +
Sbjct: 153 RYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
++ + + Q LR P + +IM CW D+RP
Sbjct: 213 SETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 40/311 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA L + A+ + + E
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVAYASKGN-----------LRE 130
Query: 190 YL-----PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
YL PG + R +++ FK ++ LARG+ YL S+ +HRD+ N+L+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 245 DANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGKPYNRKCDVYSFGIC 300
N +KIADFG+AR N D +T + +MAPE L + Y + DV+SFG+
Sbjct: 191 TENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
+WEI+ PYP + ++ ++++ R D P C + L +MR CW A P +RP
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 360 EVVKLLEAVNT 370
++V+ L+ + T
Sbjct: 308 QLVEDLDRILT 318
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD--GQ---DVAVKILDWAEDGMVTSAEAAAIRAS 135
EIE + + I I G +G V G G+ VA+K L V E R
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK------VGYTEKQ--RRD 69
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E ++ + DHPN+ G S+ +V EY+ G+
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVT--------------------KSKPVMIVTEYMENGS 109
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L FL +N + ++V + ++ G+ YL VHRD+ N+L+++N K++DF
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLR-GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 168
Query: 256 GVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPY 311
G++RV +P G + + APE + + + DV+S+GI +WE+ + PY
Sbjct: 169 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+++ DV A V + R P CP++L +M CW + RP DE+V +L+ +
Sbjct: 229 WEMTNQDVIKA-VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG+ARV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 96 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 155
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 274
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 275 HAVPSQRPTFKQLVEDLDRI 294
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G +T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDSTRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
D + R P ++ + NP +RP++ EV++
Sbjct: 212 QDTYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 211
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 330
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 331 HAVPSQRPTFKQLVEDLDRI 350
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 71/328 (21%)
Query: 89 IRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK--L 146
++ I +G +G V+RG + G++VAVKI E+ R+ FR E ++Q L
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVML 93
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ FI A D+ ++ +V +Y G+L +L R
Sbjct: 94 RHENILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRY 134
Query: 207 KLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVA 258
+ + +I++AL A GL++LH + I HRD+K++N+L+ N T IAD G+A
Sbjct: 135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
Query: 259 --RVEAQNPRDM--TGETGTLGYMAPEVLDG----KPYN--RKCDVYSFGICLWEI--YC 306
A + D+ GT YMAPEVLD K + ++ D+Y+ G+ WEI C
Sbjct: 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 254
Query: 307 C--------DMPYPDL-----SFTDVSSAVVRQNLRPDIP---RCCPS--SLASIMRKCW 348
+PY DL S ++ V Q LRP+IP + C + +A IMR+CW
Sbjct: 255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314
Query: 349 DANPDKRPVMDEVVKLLEAVNTSKGGGM 376
AN R + K L ++ +G M
Sbjct: 315 YANGAARLTALRIKKTLSQLSQQEGIKM 342
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
P + +W +E +I + +G +G VY R +A+K+L A+ E A
Sbjct: 2 PLGSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAG 53
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+ R+EV + L HPN+ + G T + + ++EY
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYA 93
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLK 251
P GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LK
Sbjct: 94 PLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Query: 252 IADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
IADFG + + RD GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 152 IADFGWSVHAPSSRRDDL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 210 EANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 8 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 59
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 99
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 100 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 158 WS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 216 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 186 VVVEYLPGGTLKKFL--------------IRNKRKKLAFKVVIQIALDLARGLSYLHSKT 231
V+VEY G L+++L N ++L+ K ++ A +ARG+ YL SK
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
+HRD+ N+L+ + +KIADFG+AR + T + +MAPE L + Y
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 290 RKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
+ DV+SFG+ LWEI+ PYP + ++ ++++ R D P C + L +MR CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCW 289
Query: 349 DANPDKRPVMDEVVKLLEAV 368
A P +RP ++V+ L+ +
Sbjct: 290 HAVPSQRPTFKQLVEDLDRI 309
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 3 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 54
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 55 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 94
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 95 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 152
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 153 WS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 210
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 211 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRR-TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 40/311 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---------VAVKILDWAEDGMVTSAEA 129
+WE KL + + G +G V G D VAVK+L +D T +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDA--TEKDL 84
Query: 130 AAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
+ + + + + H N+ +GA L + A+ + + E
Sbjct: 85 SDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVGYASKGN-----------LRE 130
Query: 190 YL-----PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
YL PG + R +++ FK ++ LARG+ YL S+ +HRD+ N+L+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 245 DANRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLDGKPYNRKCDVYSFGIC 300
N +KIADFG+AR N D +T + +MAPE L + Y + DV+SFG+
Sbjct: 191 TENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
+WEI+ PYP + ++ ++++ R D P C + L +MR CW A P +RP
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 360 EVVKLLEAVNT 370
++V+ L+ + T
Sbjct: 308 QLVEDLDRILT 318
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 50/318 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEG- 70
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 71 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 108
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKK-------------LAFKVVIQIALDLARGLSYLHSK 230
V+VE+ G L +L R+KR + L + +I + +A+G+ +L S+
Sbjct: 109 LMVIVEFCKFGNLSTYL-RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR 167
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKPY 288
+HRD+ N+LL +KI DFG+AR ++P + L +MAPE + + Y
Sbjct: 168 KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 289 NRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKC 347
+ DV+SFG+ LWEI+ PYP + + +++ R P + M C
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 287
Query: 348 WDANPDKRPVMDEVVKLL 365
W P +RP E+V+ L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 12/298 (4%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 78
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+ E+ + L H N+ +GA + G L I D N L +A ++ L
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLK 251
G + L + + L + ++ + +A+G+++L SK +HRDV N+LL K
Sbjct: 139 APGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 198
Query: 252 IADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
I DFG+AR + + L +MAPE + Y + DV+S+GI LWEI+ +
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PYP + +V+ + P P ++ SIM+ CW P RP ++ L+
Sbjct: 259 NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 3 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 54
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 95 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 152
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
+FG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 153 NFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 211 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 42/302 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
WEI + + ++ G +G V+ G Y+ VAVK L + G ++ +F +
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQ-------AFLE 56
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E + + L H + + + I + E++ G+L
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYI--------------------ITEFMAKGSLLD 96
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
FL ++ K+ +I + +A G++Y+ K +HRD++ N+L+ + KIADFG+A
Sbjct: 97 FLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
Query: 259 RVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDL 314
RV N + T G + + APE ++ + K +V+SFGI L+EI +PYP
Sbjct: 157 RVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
Query: 315 SFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
+ DV SA + Q R +PR CP L IM+ CW ++RP D + +L+ T+
Sbjct: 215 TNADVMSA-LSQGYR--MPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTAT 271
Query: 373 GG 374
G
Sbjct: 272 EG 273
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRR-TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRR-TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 3 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 54
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 94
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 95 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 152
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 153 DFGWS-VHAPSSRRXXL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 211 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 48/316 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L++ + RG +G V G D VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 69 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 106
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKK-----------LAFKVVIQIALDLARGLSYLHSKTI 232
V+VE+ G L +L R+KR + L + +I + +A+G+ +L S+
Sbjct: 107 LMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKX 165
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKPYNR 290
+HRD+ N+LL +KI DFG+AR ++P + L +MAPE + + Y
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 291 KCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 226 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
Query: 350 ANPDKRPVMDEVVKLL 365
P +RP E+V+ L
Sbjct: 286 GEPSQRPTFSELVEHL 301
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 129/305 (42%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 78
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + KL+H N+ + IG S+ SLP +++E + G
Sbjct: 79 LDFLMEALIISKLNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 118
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 119 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 177
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 238 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
Query: 362 VKLLE 366
++ +E
Sbjct: 297 LERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 129/305 (42%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 92
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + KL+H N+ + IG S+ SLP +++E + G
Sbjct: 93 LDFLMEALIISKLNHQNIVRCIGVSL-----------------QSLPRF---ILLELMAG 132
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 133 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 191
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
Query: 362 VKLLE 366
++ +E
Sbjct: 311 LERIE 315
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + + ++EY P
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPL 95
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 96 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
+FG + V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 154 NFGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 212 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 6 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 57
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + +++EY P
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRV--------------------YLILEYAPR 97
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G + K L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 98 GEVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 156 DFGWS-VHAPSSRRXXL-XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 100
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 101 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 156
Query: 250 LKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 217 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 276 DKLIRNPG 283
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 5 SRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEH 56
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
R+EV + L HPN+ + G T + + ++EY P G
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 96
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
T+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG + V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 155 FGWS-VHAPSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 127
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 128 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 183
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 184 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 244 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 303 DKLIRNPG 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIR 133
K +W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 KKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVE 55
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
R+EV + L HPN+ + G T + +++EY P
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRV--------------------YLILEYAPL 95
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
GT+ + L K K + +LA LSY HSK ++HRD+K EN+LL + LKIA
Sbjct: 96 GTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG + V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+
Sbjct: 154 DFGWS-VHAPSSRRXX-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ + + R P ++ + NP +RP++ EV++
Sbjct: 212 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG+ RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 1 QWALE--DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQ------LEKAGVEHQL 52
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 53 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 92
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 93 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 151 WS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 208
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 209 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKIL---DWAEDGMVTSAEAAAIRAS--F 136
I+ +L+ ++ G +++G + G D+ VK+L DW+ R S F
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS------------TRKSRDF 54
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+E + HPNV +GA S P+ ++ ++P G+L
Sbjct: 55 NEECPRLRIFSHPNVLPVLGAC------------------QSPPAPHPTLITHWMPYGSL 96
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHS--KTIVHRDVKTENMLLDANRTLKIAD 254
L + ++ ALD+ARG+++LH+ I + + ++++D + T +I+
Sbjct: 97 YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISM 156
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYN---RKCDVYSFGICLWEIYCCDMPY 311
V + Q+P G ++APE L KP + R D++SF + LWE+ ++P+
Sbjct: 157 ADV-KFSFQSP----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVN 369
DLS ++ V + LRP IP ++ +M+ C + +P KRP D +V +LE +
Sbjct: 212 ADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V EY+
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEYME 117
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 118 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 173
Query: 250 LKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 174 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 234 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 293 DKLIRNPG 300
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 43/298 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD--GQD---VAVKILDWAEDGMVTSAEAAAIRAS 135
EI+++ + I I G +G V G G+ VA+K L S R
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL--------KSGYTEKQRRD 54
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F E ++ + DHPNV G +T + I + E++ G+
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMI--------------------ITEFMENGS 94
Query: 196 LKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADF 255
L FL +N + ++V + +A G+ YL VHR + N+L+++N K++DF
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 256 GVARVEAQNPRDMTGETGTLG------YMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
G++R + D T T LG + APE + + + DV+S+GI +WE+ +
Sbjct: 154 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PY D++ DV +A + Q+ R P CPS+L +M CW + + RP ++V L+
Sbjct: 213 RPYWDMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 51/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L++ + RG +G V G D VAVK+L ++G
Sbjct: 14 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 69
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 70 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 107
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKK--------------LAFKVVIQIALDLARGLSYLHS 229
V+VE+ G L +L R+KR + L + +I + +A+G+ +L S
Sbjct: 108 LMVIVEFCKFGNLSTYL-RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 126/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--------PEVYSEQDE 92
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 93 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 132
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 133 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 191
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
Query: 362 VKLLE 366
++ +E
Sbjct: 311 LERIE 315
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 93 IARGTYGTVYRGAYDGQD------VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
I G +G VY+G VA+K L + R F E + +
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK--------AGYTEKQRVDFLGEAGIMGQF 103
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
H N+ + G + ++ EY+ G L KFL R K
Sbjct: 104 SHHNIIRLEGVIS--------------------KYKPMMIITEYMENGALDKFL-REKDG 142
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
+ + ++ + +A G+ YL + VHRD+ N+L+++N K++DFG++RV +P
Sbjct: 143 EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202
Query: 267 DMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSA 322
+G + + APE + + + DV+SFGI +WE+ + PY +LS +V A
Sbjct: 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262
Query: 323 VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
+ R P CPS++ +M +CW +RP ++V +L+ +
Sbjct: 263 -INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 104
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 105 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 144
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 145 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 203
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 204 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 263
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 264 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 322
Query: 362 VKLLE 366
++ +E
Sbjct: 323 LERIE 327
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 77
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 78 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPRF---ILLELMAG 117
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 118 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 176
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 237 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
Query: 362 VKLLE 366
++ +E
Sbjct: 296 LERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 78
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 79 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 118
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 119 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 177
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 238 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
Query: 362 VKLLE 366
++ +E
Sbjct: 297 LERIE 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 77
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 78 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPRF---ILMELMAG 117
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 118 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 176
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 237 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
Query: 362 VKLLE 366
++ +E
Sbjct: 296 LERIE 300
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 154/321 (47%), Gaps = 59/321 (18%)
Query: 73 LPRKT-------EEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVT 125
PRK +EW+I +L+I I +G +G VY G + G +VA++++D D
Sbjct: 14 FPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDN--- 69
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
++A F++EV +++ H NV F+GA M +L
Sbjct: 70 ---EDQLKA-FKREVMAYRQTRHENVVLFMGACMSPPHL--------------------A 105
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
++ G TL ++R+ + L QIA ++ +G+ YLH+K I+H+D+K++N+ D
Sbjct: 106 IITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD 164
Query: 246 ANRTLKIADFGVARVE-----AQNPRDMTGETGTLGYMAPEVL---------DGKPYNRK 291
+ + I DFG+ + + + + G L ++APE++ D P+++
Sbjct: 165 NGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223
Query: 292 CDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ---NLRPDIPRC-CPSSLASIMRKC 347
DV++ G +E++ + P+ T + A++ Q ++P++ + ++ I+ C
Sbjct: 224 SDVFALGTIWYELHAREWPFK----TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFC 279
Query: 348 WDANPDKRPVMDEVVKLLEAV 368
W ++RP +++ +LE +
Sbjct: 280 WAFEQEERPTFTKLMDMLEKL 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 84
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 85 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 124
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 125 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 183
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 184 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 243
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 244 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302
Query: 362 VKLLE 366
++ +E
Sbjct: 303 LERIE 307
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 94
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 95 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 134
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 135 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 193
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 194 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 253
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 254 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312
Query: 362 VKLLE 366
++ +E
Sbjct: 313 LERIE 317
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
E++ + + I I G +G V G +DVAV I + R F
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAI------KTLKVGYTEKQRRDFL 92
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E ++ + DHPNV G + +V+E++ G L
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVT--------------------RGKPVMIVIEFMENGALD 132
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
FL R + ++ + +A G+ YL VHRD+ N+L+++N K++DFG+
Sbjct: 133 AFL-RKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 258 ARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPD 313
+RV +P + TG + + APE + + + DV+S+GI +WE+ + PY D
Sbjct: 192 SRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+S DV A + + R P CP+ L +M CW +RP +++V +L+
Sbjct: 252 MSNQDVIKA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 92
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 93 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPRF---ILMELMAG 132
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 133 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 191
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 252 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
Query: 362 VKLLE 366
++ +E
Sbjct: 311 LERIE 315
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E +I + +G +G VY R +A+K+L A+ E A +
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------LEKAGVEHQL 55
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 95
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K K + +LA LSY HSK ++HRD+K EN+LL + LKIADFG
Sbjct: 96 YREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 154 WS-VHAPSSRRXX-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + NP +RP++ EV++
Sbjct: 212 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 59/331 (17%)
Query: 72 VLPRKTEEW-EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMV 124
++PR + + E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 14 LVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 125 TSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSR 182
F +E+ + + L H N+ K+ G S G NLK+
Sbjct: 74 RD---------FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL---------------- 108
Query: 183 ACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
++EYLP G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+
Sbjct: 109 ----IMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNI 163
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFG 298
L++ +KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 222
Query: 299 ICLWEI--YCCDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASI 343
+ L+E+ Y P F + +++ N R P CP + I
Sbjct: 223 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 282
Query: 344 MRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
M +CW+ N ++RP ++ ++ + + G
Sbjct: 283 MTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 59
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 60 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 97
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+VE+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 278 CWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 69 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 106
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+VE+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 69
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 70 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPRF---ILLELMAG 109
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 110 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 168
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 169 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 228
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 229 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 287
Query: 362 VKLLE 366
++ +E
Sbjct: 288 LERIE 292
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 58/315 (18%)
Query: 75 RKTEEWEIELAKLDIRHE---------IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVT 125
R TEE + E L+ +E + +GTYG VY G V + I + E
Sbjct: 3 RSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE----- 57
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
+ +E+A+ + L H N+ +++G+ +KI
Sbjct: 58 --RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI------------------- 96
Query: 186 VVVEYLPGGTLKKFL------IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKT 239
+E +PGG+L L +++ + + F + GL YLH IVHRD+K
Sbjct: 97 -FMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHDNQIVHRDIKG 150
Query: 240 ENMLLDA-NRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKP--YNRKCDVY 295
+N+L++ + LKI+DFG + R+ NP T TGTL YMAPE++D P Y + D++
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRLAGINPCTETF-TGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 296 SFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ-NLRPDIPRCCPSSLASIMRKCWDANPDK 354
S G + E+ P+ +L + V + P+IP + + + KC++ +PDK
Sbjct: 210 SLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDK 269
Query: 355 RP-----VMDEVVKL 364
R ++DE +K+
Sbjct: 270 RACANDLLVDEFLKV 284
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 118
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 119 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 158
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 159 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 217
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 218 GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 277
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 278 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336
Query: 362 VKLLE 366
++ +E
Sbjct: 337 LERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 95
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 96 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 135
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 136 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 194
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+AR A R + +M PE + K D +SFG+ LW
Sbjct: 195 GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 254
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 255 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313
Query: 362 VKLLE 366
++ +E
Sbjct: 314 LERIE 318
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 61
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 62 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 100
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 101 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 159
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 218
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 219 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 278
Query: 354 KRPVMDEVVKLLEAVNTSKGGGMIP 378
+RP ++ ++ + + G++P
Sbjct: 279 QRPSFRDLALRVDQIRDNM-AGLVP 302
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 57
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 58 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 96
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 97 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 275 QRPSFRDLALRVDQIRDNMAG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 64
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 65 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 103
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 104 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 162
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 221
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 222 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 281
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 282 QRPSFRDLALRVDQIRDNMAG 302
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 57
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 58 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 96
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 97 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 275 QRPSFRDLALRVDQIRDNMAG 295
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 69 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 106
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+VE+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 60
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 61 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 99
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 100 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 278 QRPSFRDLALRVDQIRDNMAG 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 62
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 63 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 101
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 102 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 160
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 219
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 220 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 279
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 280 QRPSFRDLALRVDQIRDNMAG 300
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 55
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 56 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 94
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 95 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 153
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 212
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 213 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 272
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + G
Sbjct: 273 QRPSFRDLALRVDQIRDQMAG 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 63
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 64 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 102
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 103 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 161
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 220
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 221 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 280
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 281 QRPSFRDLALRVDQIRDNMAG 301
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 88
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 89 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 127
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 128 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 186
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 245
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 305
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + G
Sbjct: 306 QRPSFRDLALRVDQIRDQMAG 326
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 57
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 58 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 96
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 97 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 275 QRPSFRDLALRVDQIRDNMAG 295
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 59/313 (18%)
Query: 72 VLPRKTEEW-EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMV 124
++PR + + E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 14 LVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 125 TSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSR 182
F +E+ + + L H N+ K+ G S G NLK+
Sbjct: 74 RD---------FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL---------------- 108
Query: 183 ACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
++EYLP G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+
Sbjct: 109 ----IMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNI 163
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFG 298
L++ +KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG
Sbjct: 164 LVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFG 222
Query: 299 ICLWEI--YCCDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASI 343
+ L+E+ Y P F + +++ N R P CP + I
Sbjct: 223 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 282
Query: 344 MRKCWDANPDKRP 356
M +CW+ N ++RP
Sbjct: 283 MTECWNNNVNQRP 295
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 69 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 106
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+VE+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 226
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 50 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 105
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 106 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 143
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+VE+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 263
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 323
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 324 CWHGEPSQRPTFSELVEHL 342
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 138/320 (43%), Gaps = 52/320 (16%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 70
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 71 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 108
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKK---------------LAFKVVIQIALDLARGLSYLH 228
V+VE+ G L +L R+KR + L + +I + +A+G+ +L
Sbjct: 109 LMVIVEFCKFGNLSTYL-RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 167
Query: 229 SKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGK 286
S+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 168 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 227
Query: 287 PYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 228 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 287
Query: 346 KCWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 288 DCWHGEPSQRPTFSELVEHL 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAAIR 133
E+ + + + G +G VY G G VAVK L V S +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-----EVCSEQD---E 78
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F E + K +H N+ + IG S+ SLP +++E + G
Sbjct: 79 LDFLMEALIISKFNHQNIVRCIGVSL-----------------QSLPR---FILLELMAG 118
Query: 194 GTLKKFLIRNKRKK------LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA- 246
G LK FL R R + LA ++ +A D+A G YL +HRD+ N LL
Sbjct: 119 GDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP 177
Query: 247 --NRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
R KI DFG+A+ A R + +M PE + K D +SFG+ LW
Sbjct: 178 GPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 303 EIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ MPYP S +V V R D P+ CP + IM +CW P+ RP +
Sbjct: 238 EIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
Query: 362 VKLLE 366
++ +E
Sbjct: 297 LERIE 301
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 57/317 (17%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAA 130
+WE +L + G +G V G VAVK+L +T EA
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTEREA- 95
Query: 131 AIRASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
E+ V L +H N+ +GA ++G L V+
Sbjct: 96 -----LMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------------------VIT 129
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQI----------------ALDLARGLSYLHSKTI 232
EY G L FL R + + K I + +A+G+++L SK
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNR 290
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+S+GI LWE++ PYP + ++++ R P P+ + IM+ CWD
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 309
Query: 350 ANPDKRPVMDEVVKLLE 366
A+P KRP ++V+L+E
Sbjct: 310 ADPLKRPTFKQIVQLIE 326
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 58/303 (19%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 56
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 57 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 95
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 96 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 154
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 213
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 214 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 273
Query: 354 KRP 356
+RP
Sbjct: 274 QRP 276
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 59
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 60 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 97
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+ E+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 278 CWHGEPSQRPTFSELVEHL 296
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E DI + +G +G VY R +A+K+L T E A +
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEHQL 59
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 99
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K + + +LA LSY HSK ++HRD+K EN+LL +N LKIADFG
Sbjct: 100 YREL--QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ V A + R T GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 158 WS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + N +R + EV++
Sbjct: 216 QETYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 60
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++E+LP
Sbjct: 61 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEFLP 99
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+++L ++K + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 100 YGSLREYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 278 QRPSFRDLALRVDQIRDNMAG 298
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 57/317 (17%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAA 130
+WE +L + G +G V G VAVK+L +T EA
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTEREA- 72
Query: 131 AIRASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
E+ V L +H N+ +GA ++G L V+
Sbjct: 73 -----LMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------------------VIT 106
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQI----------------ALDLARGLSYLHSKTI 232
EY G L FL R + + K I + +A+G+++L SK
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 166
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNR 290
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+S+GI LWE++ PYP + ++++ R P P+ + IM+ CWD
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 286
Query: 350 ANPDKRPVMDEVVKLLE 366
A+P KRP ++V+L+E
Sbjct: 287 ADPLKRPTFKQIVQLIE 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 57/317 (17%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAA 130
+WE +L + G +G V G VAVK+L SA
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-------PSAHLT 84
Query: 131 AIRASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
R + E+ V L +H N+ +GA ++G L V+
Sbjct: 85 E-REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------------------VIT 122
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQI----------------ALDLARGLSYLHSKTI 232
EY G L FL R + + K I + +A+G+++L SK
Sbjct: 123 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 182
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNR 290
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+S+GI LWE++ PYP + ++++ R P P+ + IM+ CWD
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 302
Query: 350 ANPDKRPVMDEVVKLLE 366
A+P KRP ++V+L+E
Sbjct: 303 ADPLKRPTFKQIVQLIE 319
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 57/317 (17%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAA 130
+WE +L + G +G V G VAVK+L SA
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-------PSAHLT 91
Query: 131 AIRASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
R + E+ V L +H N+ +GA ++G L V+
Sbjct: 92 E-REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------------------VIT 129
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQI----------------ALDLARGLSYLHSKTI 232
EY G L FL R + + K I + +A+G+++L SK
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNR 290
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+S+GI LWE++ PYP + ++++ R P P+ + IM+ CWD
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 309
Query: 350 ANPDKRPVMDEVVKLLE 366
A+P KRP ++V+L+E
Sbjct: 310 ADPLKRPTFKQIVQLIE 326
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 57/317 (17%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAA 130
+WE +L + G +G V G VAVK+L SA
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-------PSAHLT 86
Query: 131 AIRASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
R + E+ V L +H N+ +GA ++G L V+
Sbjct: 87 E-REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------------------VIT 124
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQI----------------ALDLARGLSYLHSKTI 232
EY G L FL R + + K I + +A+G+++L SK
Sbjct: 125 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 184
Query: 233 VHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNR 290
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 291 KCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWD 349
+ DV+S+GI LWE++ PYP + ++++ R P P+ + IM+ CWD
Sbjct: 245 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 304
Query: 350 ANPDKRPVMDEVVKLLE 366
A+P KRP ++V+L+E
Sbjct: 305 ADPLKRPTFKQIVQLIE 321
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V E +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEXME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASF 136
+W +E DI + +G +G VY R +A+K+L T E A +
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEHQL 59
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R+EV + L HPN+ + G T + + ++EY P GT+
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTV 99
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ L K + + +LA LSY HSK ++HRD+K EN+LL +N LKIADFG
Sbjct: 100 YREL--QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ + RD GTL Y+ PE+++G+ ++ K D++S G+ +E P+ ++
Sbjct: 158 WSVHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTY 215
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ + R P ++ + N +R + EV++
Sbjct: 216 QETYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V E +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEXME 100
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 101 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 156
Query: 250 LKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 217 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 276 DKLIRNPG 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
E++ E + R + +GTYG VY G V + I + E + +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE-------RDSRYSQPLHE 54
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E+A+ + L H N+ +++G+ +KI +E +PGG+L
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKI--------------------FMEQVPGGSLSA 94
Query: 199 FL------IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA-NRTLK 251
L +++ + + F + GL YLH IVHRD+K +N+L++ + LK
Sbjct: 95 LLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLK 149
Query: 252 IADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKP--YNRKCDVYSFGICLWEIYCCD 308
I+DFG + R+ NP T TGTL YMAPE++D P Y + D++S G + E+
Sbjct: 150 ISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 309 MPYPDLSFTDVSSAVVRQ-NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
P+ +L + V + P+IP + + + KC++ +PDKR ++++
Sbjct: 209 PPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 134/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAVKI+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK------TQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 227 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAVKI+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK------TQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 227 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ + G S+ +V E +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVT--------------------KSKPVMIVTEXME 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIA---LDLARGLSYLHSKTIVHRDVKTENMLLDANRT 249
G+L FL RK A VIQ+ +A G+ YL VHRD+ N+L+++N
Sbjct: 130 NGSLDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLV 185
Query: 250 LKIADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
K++DFG++RV +P G + + +PE + + + DV+S+GI LWE+
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PY ++S DV A V + R P CP++L +M CW + + RP +++V +L
Sbjct: 246 YGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
Query: 366 EAVNTSKG 373
+ + + G
Sbjct: 305 DKLIRNPG 312
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAVKI+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK------TQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 227 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 59
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 60 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 97
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+ E+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 278 CWHGEPSQRPTFSELVEHL 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 50/319 (15%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-------VAVKILDWAEDGM 123
E LP +WE +L + + RG +G V G D VAVK+L ++G
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEG- 59
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA 183
T +E A+ + + + + H NV +GA + P
Sbjct: 60 ATHSEHRALMSELKILIHIGH---HLNVVNLLGAC-------------------TKPGGP 97
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKV--------------VIQIALDLARGLSYLHS 229
V+ E+ G L +L + + + +KV +I + +A+G+ +L S
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKP 287
+ +HRD+ N+LL +KI DFG+AR ++P + L +MAPE + +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 288 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI+ PYP + + +++ R P + M
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 347 CWDANPDKRPVMDEVVKLL 365
CW P +RP E+V+ L
Sbjct: 278 CWHGEPSQRPTFSELVEHL 296
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAVKI+D T +++++ FR EV + + L+HPN
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 67
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 68 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGWMKEKE 107
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 108 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 159
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 160 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 219
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 220 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 87 LDIRHEIARGTYGTVYRGAYDGQ-DVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
L E+ G +G V G + GQ DVA+K++ E + F +E V
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----------KEGSMSEDEFIEEAKVMMN 55
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L H + + G R ++ EY+ G L +L R R
Sbjct: 56 LSHEKLVQLYGVCT--------------------KQRPIFIITEYMANGCLLNYL-REMR 94
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + ++++ D+ + YL SK +HRD+ N L++ +K++DFG++R +
Sbjct: 95 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD- 153
Query: 266 RDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSS 321
+ T G+ + + PEVL ++ K D+++FG+ +WEIY MPY + ++ +
Sbjct: 154 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ Q LR P + +IM CW D+RP
Sbjct: 213 HIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 58
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 59 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 97
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L ++K + K+ +Q + +G+ YL +K +HR++ T N+L++ +KI
Sbjct: 98 YGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKI 156
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 215
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 216 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 275
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 276 QRPSFRDLALRVDQIRDNMAG 296
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAV+I+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK------TQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 227 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 21/299 (7%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 93
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLP-SRACCVVVEY 190
+ E+ + L H N+ +GA + G L I D N L R + Y
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY 153
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTL 250
P N ++L+ + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 154 NPS--------HNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 205
Query: 251 KIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
KI DFG+AR + + L +MAPE + Y + DV+S+GI LWEI+
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 265
Query: 309 M-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
+ PYP + +V+ + P P ++ SIM+ CW P RP ++ L+
Sbjct: 266 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAV+I+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK------TQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +V+EY GG + +L+ + K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR +++++K
Sbjct: 227 RGKYR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 153/342 (44%), Gaps = 78/342 (22%)
Query: 72 VLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
+L ++T +I++ K +I +G YG V+ G + G+ VAVK+ E+
Sbjct: 29 LLVQRTIAKQIQMVK-----QIGKGRYGEVWMGKWRGEKVAVKVFFTTEE---------- 73
Query: 132 IRASFRQEVAVWQK--LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVE 189
AS+ +E ++Q + H N+ FI A + T S L ++ +
Sbjct: 74 --ASWFRETEIYQTVLMRHENILGFIAADIKGTG-----------SWTQL-----YLITD 115
Query: 190 YLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK--------TIVHRDVKTEN 241
Y G+L +L K L K ++++A GL +LH++ I HRD+K++N
Sbjct: 116 YHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172
Query: 242 MLLDANRTLKIADFGVA--RVEAQNPRDMTGET--GTLGYMAPEVLDGKPYNRK------ 291
+L+ N T IAD G+A + N D+ T GT YM PEVLD + NR
Sbjct: 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYI 231
Query: 292 -CDVYSFGICLWEI--YCC--------DMPYPDL-----SFTDVSSAVVRQNLRPDIPRC 335
D+YSFG+ LWE+ C +PY DL S+ D+ V + LRP P
Sbjct: 232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR 291
Query: 336 -----CPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSK 372
C + +M +CW NP R V K L ++ S+
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L G A ++E+ + +
Sbjct: 28 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--------ADLKKEIEILRN 79
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L H N+ K+ G T D N + +++E+LP G+LK++L +NK
Sbjct: 80 LYHENIVKYKGI-------------CTEDGGNGIK-----LIMEFLPSGSLKEYLPKNKN 121
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
K + K ++ A+ + +G+ YL S+ VHRD+ N+L+++ +KI DFG+ + +
Sbjct: 122 K-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 266 RDMT---GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC----------CDMP 310
T + + APE L + DV+SFG+ L E+ YC M
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240
Query: 311 YPDLSFTDVSSAV--VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
P V+ V +++ R P CP + +MRKCW+ P R +++ EA+
Sbjct: 241 GPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L G A ++E+ + +
Sbjct: 16 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--------ADLKKEIEILRN 67
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L H N+ K+ G T D N + +++E+LP G+LK++L +NK
Sbjct: 68 LYHENIVKYKGI-------------CTEDGGNGIK-----LIMEFLPSGSLKEYLPKNKN 109
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
K + K ++ A+ + +G+ YL S+ VHRD+ N+L+++ +KI DFG+ + +
Sbjct: 110 K-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 266 RDMT---GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC----------CDMP 310
T + + APE L + DV+SFG+ L E+ YC M
Sbjct: 169 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 228
Query: 311 YPDLSFTDVSSAV--VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
P V+ V +++ R P CP + +MRKCW+ P R +++ EA+
Sbjct: 229 GPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 21/298 (7%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 93
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+ E+ + L H N+ +GA + G L I D N L R V+E
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETD 151
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLK 251
P F I N L+ + ++ + +A+G+++L SK +HRDV N+LL K
Sbjct: 152 PA-----FAIANS--TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 204
Query: 252 IADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
I DFG+AR + + L +MAPE + Y + DV+S+GI LWEI+ +
Sbjct: 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PYP + +V+ + P P ++ SIM+ CW P RP ++ L+
Sbjct: 265 NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 24 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 78
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 79 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 116
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 117 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 177 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 236
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IMRKCW + D RP E++
Sbjct: 237 EISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 71
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 72 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 109
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 110 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IMRKCW + D RP E++
Sbjct: 230 EISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 140/323 (43%), Gaps = 79/323 (24%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ-EVAVWQKLDHPNV 151
+ +G YG V+RG + G+ VAVKI ++ ++ FR+ E+ L H N+
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDE-----------QSWFRETEIYNTVLLRHDNI 64
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
FI + M + N S ++ Y G+L FL +R+ L
Sbjct: 65 LGFIASDMTSRN----------------SSTQLWLITHYHEHGSLYDFL---QRQTLEPH 105
Query: 212 VVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ +++A+ A GL++LH + I HRD K+ N+L+ +N IAD G+A + +Q
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 264 ---------NPRDMTGETGTLGYMAPEVLDGKPYN------RKCDVYSFGICLWEIY--- 305
NPR GT YMAPEVLD + + D+++FG+ LWEI
Sbjct: 166 GSDYLDIGNNPR-----VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRT 220
Query: 306 ------------CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCP-----SSLASIMRKCW 348
D+ D SF D+ V P IP S LA +MR+CW
Sbjct: 221 IVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECW 280
Query: 349 DANPDKRPVMDEVVKLLEAVNTS 371
NP R + K L+ ++ S
Sbjct: 281 YPNPSARLTALRIKKTLQKISNS 303
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IMRKCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 44/298 (14%)
Query: 91 HEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+++ G +G VY+G + VAVK L D +T+ E ++ F QE+ V K H N
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 91
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKLA 209
+ + +G S +L C+V Y+P G+L + + L+
Sbjct: 92 LVELLGFSSDGDDL--------------------CLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + +IA A G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 270 GE--TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY------PDLSFTDVSS 321
GT YMAPE L G+ K D+YSFG+ L EI +P P L
Sbjct: 192 XSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI-ITGLPAVDEHREPQLLLDIKEE 249
Query: 322 AVVRQNLRPDI--------PRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+ D ++ S+ +C +KRP + +V +LL+ + S
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 27/298 (9%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAAAIR 133
EI L+ + E+ +G VY+G G Q VA+K L +G +R
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------PLR 73
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLK-IPSQSATSDSHNSLPSRACCVVVEYLP 192
FR E + +L HPNV +G L I S + D H L R+ V
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV---- 129
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G T +++ + F + + +A G+ YL S +VH+D+ T N+L+ +KI
Sbjct: 130 GSTDDDRTVKSALEPPDF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 186
Query: 253 ADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM- 309
+D G+ R V A + + G + + +MAPE + ++ D++S+G+ LWE++ +
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 310 PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
PY S DV + + + P P CP+ + ++M +CW+ P +RP ++ L A
Sbjct: 247 PYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 82/325 (25%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
++L L + I RG YG VY+G+ D + VAVK+ +A R +F E
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN------------RQNFINEKN 57
Query: 142 VWQ--KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+++ ++H N+ +FI + + T+D +V+EY P G+L K+
Sbjct: 58 IYRVPLMEHDNIARFI----------VGDERVTADGRMEY-----LLVMEYYPNGSLXKY 102
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSK---------TIVHRDVKTENMLLDANRTL 250
L + ++ ++A + RGL+YLH++ I HRD+ + N+L+ + T
Sbjct: 103 LSLHTSDWVS---SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
Query: 251 KIADFGVARVEAQNPRDMTG--------ETGTLGYMAPEVLDGKPYNR-------KCDVY 295
I+DFG++ N G E GT+ YMAPEVL+G R + D+Y
Sbjct: 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY 219
Query: 296 SFGICLWEIY--CCDMPYPDLS-----------------FTDVSSAVVRQNLRPDIPRC- 335
+ G+ WEI+ C D+ +P S F D+ V R+ RP P
Sbjct: 220 ALGLIYWEIFMRCTDL-FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW 278
Query: 336 -----CPSSLASIMRKCWDANPDKR 355
SL + CWD + + R
Sbjct: 279 KENSLAVRSLKETIEDCWDQDAEAR 303
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 27/298 (9%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGMVTSAEAAAIR 133
EI L+ + E+ +G VY+G G Q VA+K L +G +R
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------PLR 56
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLK-IPSQSATSDSHNSLPSRACCVVVEYLP 192
FR E + +L HPNV +G L I S + D H L R+ V
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV---- 112
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G T +++ + F + + +A G+ YL S +VH+D+ T N+L+ +KI
Sbjct: 113 GSTDDDRTVKSALEPPDF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 169
Query: 253 ADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM- 309
+D G+ R V A + + G + + +MAPE + ++ D++S+G+ LWE++ +
Sbjct: 170 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 229
Query: 310 PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
PY S DV + + + P P CP+ + ++M +CW+ P +RP ++ L A
Sbjct: 230 PYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 286
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 58/321 (18%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRA 134
+ E L ++ +G +G+V YD G+ VAVK L + + +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-------- 60
Query: 135 SFRQEVAVWQKLDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
F +E+ + + L H N+ K+ G S G NLK+ ++EYLP
Sbjct: 61 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IMEYLP 99
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L+ +L + + K+ +Q + +G+ YL +K +HRD+ T N+L++ +KI
Sbjct: 100 YGSLRDYLQAHAERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
Query: 253 ADFGVARVEAQNPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YC 306
DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+ Y
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 307 CDMPYPDLSFTDVSS-------------AVVRQNLRPDIPRCCPSSLASIMRKCWDANPD 353
P F + +++ N R P CP + IM +CW+ N +
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 354 KRPVMDEVVKLLEAVNTSKGG 374
+RP ++ ++ + + G
Sbjct: 278 QRPSFRDLALRVDQIRDNMAG 298
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 85
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+ E+ + L H N+ +GA +H V+ EY
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGAC----------------THGG----PVLVITEYCC 125
Query: 193 GGTLKKFLIRNKR--------KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
G L FL R + L + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
Query: 245 DANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLW 302
KI DFG+AR + + L +MAPE + Y + DV+S+GI LW
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 303 EIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ + PYP + +V+ + P P ++ SIM+ CW P RP ++
Sbjct: 246 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
Query: 362 VKLLE 366
L+
Sbjct: 306 CSFLQ 310
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 44/298 (14%)
Query: 91 HEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+++ G +G VY+G + VAVK L D +T+ E ++ F QE+ V K H N
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 91
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKLA 209
+ + +G S +L C+V Y+P G+L + + L+
Sbjct: 92 LVELLGFSSDGDDL--------------------CLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + +IA A G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 270 GE--TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY------PDLSFTDVSS 321
GT YMAPE L G+ K D+YSFG+ L EI +P P L
Sbjct: 192 XXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI-ITGLPAVDEHREPQLLLDIKEE 249
Query: 322 AVVRQNLRPDI--------PRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+ D ++ S+ +C +KRP + +V +LL+ + S
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ G + ++ EY+
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVT--------------------KCKPVMIITEYME 98
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL +N + ++V + + G+ YL + VHRD+ N+L+++N K+
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 157
Query: 253 ADFGVARVEAQNPRDMTGETGT---LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
+DFG++RV +P G + + APE + + + DV+S+GI +WE+ +
Sbjct: 158 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 217
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PY D+S DV A + + R P CP +L +M CW RP ++V +L+ +
Sbjct: 218 RPYWDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 39/305 (12%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 93
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+ E+ + L H N+ +GA +H V+ EY
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGAC----------------THGG----PVLVITEYCC 133
Query: 193 GGTLKKFLIRNKR--------KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
G L FL R + L + ++ + +A+G+++L SK +HRDV N+LL
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
Query: 245 DANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLW 302
KI DFG+AR + + L +MAPE + Y + DV+S+GI LW
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 303 EIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
EI+ + PYP + +V+ + P P ++ SIM+ CW P RP ++
Sbjct: 254 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
Query: 362 VKLLE 366
L+
Sbjct: 314 CSFLQ 318
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VAVKI+D T +++++ FR EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK------TQLNSSSLQKLFR-EVRIXKVLNHPN 74
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK--- 207
+ K I ++ + +V EY GG + +L+ + R K
Sbjct: 75 IVKLFEV--------IETE------------KTLYLVXEYASGGEVFDYLVAHGRXKEKE 114
Query: 208 --LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 115 ARAKFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN-EFTFG 166
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 226
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + ++++K NP KR ++++ K
Sbjct: 227 RGKYR--IPFYXSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 44/298 (14%)
Query: 91 HEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+++ G +G VY+G + VAVK L D +T+ E ++ F QE+ V K H N
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 85
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKLA 209
+ + +G S +L C+V Y+P G+L + + L+
Sbjct: 86 LVELLGFSSDGDDL--------------------CLVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + +IA A G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 270 GE--TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY------PDLSFTDVSS 321
GT YMAPE L G+ K D+YSFG+ L EI +P P L
Sbjct: 186 XXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI-ITGLPAVDEHREPQLLLDIKEE 243
Query: 322 AVVRQNLRPDI--------PRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+ D ++ S+ +C +KRP + +V +LL+ + S
Sbjct: 244 IEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 26/240 (10%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ G T K ++ EY+
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGV---VTKCK-----------------PVMIITEYME 92
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL +N + ++V + + G+ YL + VHRD+ N+L+++N K+
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 151
Query: 253 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
+DFG++RV +P G + + APE + + + DV+S+GI +WE+ +
Sbjct: 152 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 211
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PY D+S DV A + + R P CP +L +M CW RP ++V +L+ +
Sbjct: 212 RPYWDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 70
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 71 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 108
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 109 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IMRKCW + D RP E++
Sbjct: 229 EISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 26/240 (10%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
R F E ++ + DHPN+ G T K ++ EY+
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGV---VTKCK-----------------PVMIITEYME 113
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G+L FL +N + ++V + + G+ YL + VHRD+ N+L+++N K+
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKV 172
Query: 253 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-D 308
+DFG++RV +P G + + APE + + + DV+S+GI +WE+ +
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 232
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 368
PY D+S DV A + + R P CP +L +M CW RP ++V +L+ +
Sbjct: 233 RPYWDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 39/273 (14%)
Query: 92 EIARGTYGTVYRGAYDGQ----DVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
E+ G +G+V +G Y + DVA+K+L E A R E + +LD
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-------QGTEKADTEEMMR-EAQIMHQLD 68
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
+P + + IG + A +V+E GG L KFL+ KR++
Sbjct: 69 NPYIVRLIGVCQ---------------------AEALMLVMEMAGGGPLHKFLV-GKREE 106
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ V ++ ++ G+ YL K VHRD+ N+LL KI+DFG+++ +
Sbjct: 107 IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166
Query: 268 MTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWE-IYCCDMPYPDLSFTDVSSAV 323
T + L + APE ++ + ++ + DV+S+G+ +WE + PY + +V A
Sbjct: 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAF 225
Query: 324 VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRP 356
+ Q R + P CP L ++M CW + RP
Sbjct: 226 IEQGKRMECPPECPPELYALMSDCWIYKWEDRP 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 70
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 71 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 108
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 109 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IMRKCW + D RP E++
Sbjct: 229 EISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 42/308 (13%)
Query: 93 IARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I G +G V++ + DG+ ++ + + + AE +EV KLDH N
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE----KAE---------REVKALAKLDHVN 66
Query: 151 VTKFIGASMG------TTNLKIPSQSAT-SDSHNSLPSRACCVVV--EYLPGGTLKKFLI 201
+ + G G T++ + S +S NS S+ C+ + E+ GTL++++
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVE 261
+ + +KL + +++ + +G+ Y+HSK ++HRD+K N+ L + +KI DFG+
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TS 185
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE-IYCCDMPYPDLS-FTDV 319
+N T GTL YM+PE + + Y ++ D+Y+ G+ L E ++ CD + FTD+
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDL 245
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPE 379
++ DI ++++K P+ RP E+++ L S PE
Sbjct: 246 RDGII-----SDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS------PE 291
Query: 380 -DQAHGCL 386
++ H C+
Sbjct: 292 KNERHTCV 299
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 84 LAKLDIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
KLD I +G++G VY+G + + VA+KI+D E A +QE+
Sbjct: 21 FTKLD---RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEE--------AEDEIEDIQQEIT 69
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
V + D P +T++ G+ + +T L +++EYL GG+ L
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKL--------------------WIIMEYLGGGSALDLL- 108
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVE 261
K L + I ++ +GL YLHS+ +HRD+K N+LL +K+ADFGVA
Sbjct: 109 --KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 166
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSS 321
GT +MAPEV+ Y+ K D++S GI E+ + P DL V
Sbjct: 167 TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-L 225
Query: 322 AVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ +N P + + C + +P RP E++K
Sbjct: 226 FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 21/298 (7%)
Query: 77 TEEWEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIR 133
E+WE L + G +G V G +D +K+ M+ S A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV----AVKMLKSTAHADEK 93
Query: 134 ASFRQEVAVWQKL-DHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+ E+ + L H N+ +GA + G L I D N L R V+E
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETD 151
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLK 251
P F I N + ++ + +A+G+++L SK +HRDV N+LL K
Sbjct: 152 PA-----FAIANSTAST--RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 204
Query: 252 IADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
I DFG+AR + + L +MAPE + Y + DV+S+GI LWEI+ +
Sbjct: 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 310 -PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
PYP + +V+ + P P ++ SIM+ CW P RP ++ L+
Sbjct: 265 NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 213 VIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM-TGE 271
+I + +ARG+ +L S+ +HRD+ N+LL N +KI DFG+AR +NP + G+
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 272 TGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLR 329
T L +MAPE + K Y+ K DV+S+G+ LWEI+ PYP + + + +R+ +R
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 330 PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
P + IM CW +P +RP E+V+ L
Sbjct: 321 MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 71 EVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDG-------QDVAVKILDWAEDGM 123
E LP +WE +L + + RG +G V + + G + VAVK+L ++G
Sbjct: 13 ERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML---KEG- 68
Query: 124 VTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGA 157
T++E A+ + + H NV +GA
Sbjct: 69 ATASEYKALMTELKILTHIGH---HLNVVNLLGA 99
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 15 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 69
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 70 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGXLLDY- 107
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 108 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 168 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 228 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 139/289 (48%), Gaps = 39/289 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRAS--F 136
E E K+ + + G +GTVY+G + +G+ V + + ++ EA + +A+
Sbjct: 48 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPV------AIMELREATSPKANKEI 98
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
E V +D+P+V + +G + +T ++ + +P G L
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCL 137
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ +R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG
Sbjct: 138 LDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 196
Query: 257 VARVEAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPD 313
+A++ ++ E G + +MA E + + Y + DV+S+G+ +WE+ PY
Sbjct: 197 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
Query: 314 LSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ +++SS + + P P C + IM KCW + D RP E++
Sbjct: 257 IPASEISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 45/295 (15%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKIL---DWAEDGMVTSAEAAAIRAS--F 136
I+ +L+ ++ G +++G + G D+ VK+L DW+ R S F
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS------------TRKSRDF 54
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+E + HPNV +GA S P+ ++ + P G+L
Sbjct: 55 NEECPRLRIFSHPNVLPVLGACQ------------------SPPAPHPTLITHWXPYGSL 96
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHS--KTIVHRDVKTENMLLDANRTLKIAD 254
L + ++ ALD ARG ++LH+ I + + ++ +D + T +I+
Sbjct: 97 YNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISX 156
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYN---RKCDVYSFGICLWEIYCCDMPY 311
V + Q+P G ++APE L KP + R D +SF + LWE+ ++P+
Sbjct: 157 ADV-KFSFQSP----GRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF 211
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
DLS ++ V + LRP IP ++ + + C + +P KRP D +V +LE
Sbjct: 212 ADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 58/309 (18%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L + R+ ++QE+ + +
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--------KADAGPQHRSGWKQEIDILRT 89
Query: 146 LDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
L H ++ K+ G G +L++ V+EY+P G+L+ +L R+
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQL--------------------VMEYVPLGSLRDYLPRH 129
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ ++ A + G++YLH++ +HRD+ N+LLD +R +KI DFG+A+ +
Sbjct: 130 S---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
Query: 264 NPRDMT----GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFT 317
G++ Y APE L + DV+SFG+ L+E+ +C P F
Sbjct: 187 GHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245
Query: 318 DV------------SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
++ + ++ + R P CP+ + +M+ CW+ RP + ++ +L
Sbjct: 246 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
Query: 366 EAVNTSKGG 374
+ V+ G
Sbjct: 306 KTVHEKYQG 314
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 18 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 72
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 73 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 110
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 111 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 231 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 70
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 71 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 108
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 109 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 229 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 15 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 69
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 70 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 107
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 108 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 168 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 227
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 228 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 71
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 72 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 109
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 110 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 230 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + ++ G +GTVY+G + + VKI ++ + A + E
Sbjct: 21 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 75
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 76 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 113
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 234 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + ++ G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGXLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 92 EIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I +G++G V++G + VA+KI+D E A +QE+ V + D P
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------AEDEIEDIQQEITVLSQCDSP 80
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
VTK+ G+ + T L +++EYL GG+ L +
Sbjct: 81 YVTKYYGSYLKDTKL--------------------WIIMEYLGGGSALDLLEPGPLDETQ 120
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+++ ++ +GL YLHS+ +HRD+K N+LL + +K+ADFGVA
Sbjct: 121 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 270 GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR 329
GT +MAPEV+ Y+ K D++S GI E+ + P+ +L V + + N
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 236
Query: 330 PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
P + L + C + P RP E++K
Sbjct: 237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + ++ G +GTVY+G + + VKI ++ + A + E
Sbjct: 21 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 75
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 76 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 113
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 234 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 70
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 71 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 108
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 109 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 229 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 20 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 74
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 75 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 112
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 113 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 173 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 232
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 233 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 21 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 75
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 76 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 113
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 234 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 92 EIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I +G++G V++G + VA+KI+D E A +QE+ V + D P
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------AEDEIEDIQQEITVLSQCDSP 65
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
VTK+ G+ + T L +++EYL GG+ L +
Sbjct: 66 YVTKYYGSYLKDTKL--------------------WIIMEYLGGGSALDLLEPGPLDETQ 105
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+++ ++ +GL YLHS+ +HRD+K N+LL + +K+ADFGVA
Sbjct: 106 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 270 GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR 329
GT +MAPEV+ Y+ K D++S GI E+ + P+ +L V + + N
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 221
Query: 330 PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
P + L + C + P RP E++K
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 92 EIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I +G++G V++G + VA+KI+D E A +QE+ V + D P
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------AEDEIEDIQQEITVLSQCDSP 65
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
VTK+ G+ + T L +++EYL GG+ L +
Sbjct: 66 YVTKYYGSYLKDTKL--------------------WIIMEYLGGGSALDLLEPGPLDETQ 105
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+++ ++ +GL YLHS+ +HRD+K N+LL + +K+ADFGVA
Sbjct: 106 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 270 GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR 329
GT +MAPEV+ Y+ K D++S GI E+ + P+ +L V + + N
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 221
Query: 330 PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
P + L + C + P RP E++K
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 39 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 93
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 94 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 131
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 132 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 192 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 251
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 252 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 71
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 72 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 109
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 110 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 230 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 71
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 72 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 109
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 110 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 230 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 92 EIARGTYGTVYRGAYDGQ----DVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
E+ G +G+V +G Y + DVA+K+L + T +E + +LD
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE--------EMMREAQIMHQLD 394
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
+P + + IG + A +V+E GG L KFL+ KR++
Sbjct: 395 NPYIVRLIGVCQ---------------------AEALMLVMEMAGGGPLHKFLV-GKREE 432
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ V ++ ++ G+ YL K VHR++ N+LL KI+DFG+++ +
Sbjct: 433 IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492
Query: 268 MTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWE-IYCCDMPYPDLSFTDVSSAV 323
T + L + APE ++ + ++ + DV+S+G+ +WE + PY + +V A
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAF 551
Query: 324 VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTS 371
+ Q R + P CP L ++M CW + RP V + + A S
Sbjct: 552 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 92 EIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I +G++G V++G + VA+KI+D E A +QE+ V + D P
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------AEDEIEDIQQEITVLSQCDSP 85
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
VTK+ G+ + T L +++EYL GG+ L +
Sbjct: 86 YVTKYYGSYLKDTKL--------------------WIIMEYLGGGSALDLLEPGPLDETQ 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+++ ++ +GL YLHS+ +HRD+K N+LL + +K+ADFGVA
Sbjct: 126 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 182
Query: 270 GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR 329
GT +MAPEV+ Y+ K D++S GI E+ + P+ +L V + + N
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 241
Query: 330 PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
P + L + C + P RP E++K
Sbjct: 242 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 71/317 (22%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ-EVAVWQKLDHPNV 151
+ +G YG V+RG++ G++VAVKI ++ ++ FR+ E+ L H N+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDE-----------KSWFRETELYNTVMLRHENI 64
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
FI + M + + S ++ Y G+L +L + L
Sbjct: 65 LGFIASDMTSRH----------------SSTQLWLITHYHEMGSLYDYL---QLTTLDTV 105
Query: 212 VVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
++I L +A GL++LH + I HRD+K++N+L+ N IAD G+A + +Q
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 264 NPRDM----TGETGTLGYMAPEVLDGK-------PYNRKCDVYSFGICLWEIY------- 305
+ + GT YMAPEVLD Y R D+++FG+ LWE+
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNG 224
Query: 306 --------CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPS-----SLASIMRKCWDANP 352
D+ D SF D+ V RP+IP S SLA +M++CW NP
Sbjct: 225 IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNP 284
Query: 353 DKRPVMDEVVKLLEAVN 369
R + K L ++
Sbjct: 285 SARLTALRIKKTLTKID 301
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 8 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 62
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 63 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 100
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 101 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 220
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 221 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 71/317 (22%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ-EVAVWQKLDHPNV 151
+ +G YG V+RG++ G++VAVKI ++ ++ FR+ E+ L H N+
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDE-----------KSWFRETELYNTVMLRHENI 93
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
FI + M + + S ++ Y G+L +L + L
Sbjct: 94 LGFIASDMTSRH----------------SSTQLWLITHYHEMGSLYDYL---QLTTLDTV 134
Query: 212 VVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
++I L +A GL++LH + I HRD+K++N+L+ N IAD G+A + +Q
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 264 NPRDM----TGETGTLGYMAPEVLDGK-------PYNRKCDVYSFGICLWEIY------- 305
+ + GT YMAPEVLD Y R D+++FG+ LWE+
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNG 253
Query: 306 --------CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPS-----SLASIMRKCWDANP 352
D+ D SF D+ V RP+IP S SLA +M++CW NP
Sbjct: 254 IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNP 313
Query: 353 DKRPVMDEVVKLLEAVN 369
R + K L ++
Sbjct: 314 SARLTALRIKKTLTKID 330
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VA+KI+D T +++ FR EV + + L+HPN
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDK------TQLNPTSLQKLFR-EVRIMKILNHPN 72
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +++EY GG + +L+ + K
Sbjct: 73 IVKLFEV--------IETE------------KTLYLIMEYASGGEVFDYLVAHGRMKEKE 112
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 113 ARSKFRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVG 164
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 224
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + +++++ NP KR +++++K
Sbjct: 225 RGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 71/317 (22%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ-EVAVWQKLDHPNV 151
+ +G YG V+RG++ G++VAVKI ++ ++ FR+ E+ L H N+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDE-----------KSWFRETELYNTVMLRHENI 64
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
FI + M + + S ++ Y G+L +L + L
Sbjct: 65 LGFIASDMTSRH----------------SSTQLWLITHYHEMGSLYDYL---QLTTLDTV 105
Query: 212 VVIQIALDLARGLSYLHSK--------TIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
++I L +A GL++LH + I HRD+K++N+L+ N IAD G+A + +Q
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 264 NPRDM----TGETGTLGYMAPEVLDGK-------PYNRKCDVYSFGICLWEIY------- 305
+ + GT YMAPEVLD Y R D+++FG+ LWE+
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNG 224
Query: 306 --------CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPS-----SLASIMRKCWDANP 352
D+ D SF D+ V RP+IP S SLA +M++CW NP
Sbjct: 225 IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNP 284
Query: 353 DKRPVMDEVVKLLEAVN 369
R + K L ++
Sbjct: 285 SARLTALRIKKTLTKID 301
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 43/290 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQDV----AVKILDWAEDGMVTSAEAAAIRA 134
E EL ++ + + G +GTVY+G + +G+ V A+KIL+ T+ A +
Sbjct: 14 ETELKRVKV---LGSGAFGTVYKGIWVPEGETVKIPVAIKILN------ETTGPKANV-- 62
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E + +DHP++ + +G + T +V + +P G
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPT---------------------IQLVTQLMPHG 101
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L ++ + + + ++++ + +A+G+ YL + +VHRD+ N+L+ + +KI D
Sbjct: 102 CLLEY-VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITD 160
Query: 255 FGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPY 311
FG+AR+ + ++ + G + +MA E + + + + DV+S+G+ +WE+ PY
Sbjct: 161 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+ ++ + + P P C + +M KCW + D RP E+
Sbjct: 221 DGIPTREIPDLLEKGERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 61/326 (18%)
Query: 79 EWEIELAKLDIRHEIARGTYGTV-------YRGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
+WE L + + G +G V +G VAVK+L +A +
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-------ENASPSE 69
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+R E V ++++HP+V K GA SQ ++VEY
Sbjct: 70 LR-DLLSEFNVLKQVNHPHVIKLYGAC---------SQDG-----------PLLLIVEYA 108
Query: 192 PGGTLKKFLIRNKR----------------------KKLAFKVVIQIALDLARGLSYLHS 229
G+L+ FL +++ + L +I A +++G+ YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKP 287
++VHRD+ N+L+ R +KI+DFG++R + + G + +MA E L
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 288 YNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI PYP + + + +++ R + P C + +M +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 347 CWDANPDKRPVMDEVVKLLEAVNTSK 372
CW PDKRPV ++ K LE + +
Sbjct: 288 CWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 43/290 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQDV----AVKILDWAEDGMVTSAEAAAIRA 134
E EL ++ + + G +GTVY+G + +G+ V A+KIL+ T+ A +
Sbjct: 37 ETELKRVKV---LGSGAFGTVYKGIWVPEGETVKIPVAIKILN------ETTGPKANV-- 85
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E + +DHP++ + +G + T +V + +P G
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPT---------------------IQLVTQLMPHG 124
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L ++ + + + ++++ + +A+G+ YL + +VHRD+ N+L+ + +KI D
Sbjct: 125 CLLEY-VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITD 183
Query: 255 FGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPY 311
FG+AR+ + ++ + G + +MA E + + + + DV+S+G+ +WE+ PY
Sbjct: 184 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+ ++ + + P P C + +M KCW + D RP E+
Sbjct: 244 DGIPTREIPDLLEKGERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 75
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 76 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 113
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 11 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 65
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 66 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 103
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A G++YL + +VHRD+ N+L+ + +KI DFG+A++
Sbjct: 104 VREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 164 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 223
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 224 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 34/296 (11%)
Query: 73 LPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-----VAVKILDWAEDGMVTSA 127
L K E+ I + + + +G +G+V +D VAVK+L + ++ S+
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML---KADIIASS 67
Query: 128 EAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVV 187
+ F +E A ++ DHP+V K +G S+ S + LP V+
Sbjct: 68 DIE----EFLREAACMKEFDHPHVAKLVGVSL------------RSRAKGRLPIPM--VI 109
Query: 188 VEYLPGGTLKKFLIRNKRKK----LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML 243
+ ++ G L FL+ ++ + L + +++ +D+A G+ YL S+ +HRD+ N +
Sbjct: 110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM 169
Query: 244 LDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICL 301
L + T+ +ADFG++R R + ++A E L Y DV++FG+ +
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM 229
Query: 302 WEIYC-CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRP 356
WEI PY + ++ + ++ N R P C + +M +CW A+P +RP
Sbjct: 230 WEIMTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRP 284
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 70 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 107
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 228 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 75
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 76 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 113
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 174 NDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 45/279 (16%)
Query: 93 IARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R G++VA+KI+D T +++ FR EV + + L+HPN
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDK------TQLNPTSLQKLFR-EVRIMKILNHPN 75
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI-----RNKR 205
+ K I ++ + +++EY GG + +L+ + K
Sbjct: 76 IVKLFEV--------IETE------------KTLYLIMEYASGGEVFDYLVAHGRMKEKE 115
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ F+ ++ + Y H K IVHRD+K EN+LLDA+ +KIADFG + E
Sbjct: 116 ARSKFRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVG 167
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++ V+
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
R R IP + +++++ NP KR +++++K
Sbjct: 228 RGKYR--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 70
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 71 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 108
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 109 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 228
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 229 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 70 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 107
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 228 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 65
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 103
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 164 NDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 65
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 103
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 87 LDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
L + ++ G++G V RG +D G+ V+V + D +++ EA F +EV
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMD---DFIREVNAM 65
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
LDH N+ + G + T +K+ V E P G+L L R
Sbjct: 66 HSLDHRNLIRLYGVVL-TPPMKM--------------------VTELAPLGSLLDRL-RK 103
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + A+ +A G+ YL SK +HRD+ N+LL +KI DFG+ R Q
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 264 NPRDMTGETG---TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDV 319
N + + APE L + ++ D + FG+ LWE++ P+ L+ + +
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ ++ R P CP + ++M +CW P+ RP
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 18 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 72
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++++ +P G L +
Sbjct: 73 YVMASVDNPHVCRLLGICLTST---------------------VQLIMQLMPFGCLLDY- 110
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 111 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 230
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 231 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 69 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 106
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 107 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 227 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 61/326 (18%)
Query: 79 EWEIELAKLDIRHEIARGTYGTV-------YRGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
+WE L + + G +G V +G VAVK+L +A +
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-------ENASPSE 69
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+R E V ++++HP+V K GA SQ ++VEY
Sbjct: 70 LR-DLLSEFNVLKQVNHPHVIKLYGAC---------SQDG-----------PLLLIVEYA 108
Query: 192 PGGTLKKFLIRNKR----------------------KKLAFKVVIQIALDLARGLSYLHS 229
G+L+ FL +++ + L +I A +++G+ YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKP 287
+VHRD+ N+L+ R +KI+DFG++R + + G + +MA E L
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 288 YNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI PYP + + + +++ R + P C + +M +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 347 CWDANPDKRPVMDEVVKLLEAVNTSK 372
CW PDKRPV ++ K LE + +
Sbjct: 288 CWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 31/285 (10%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E E K+ + + G +GTVY+G + + VKI ++ + A + E
Sbjct: 21 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEA 75
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V +D+P+V + +G + +T ++ + +P G L +
Sbjct: 76 YVMASVDNPHVCRLLGICLTST---------------------VQLITQLMPFGCLLDY- 113
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+R + + + ++ + +A+G++YL + +VHRD+ N+L+ + +KI DFG A++
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
Query: 261 EAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFT 317
++ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 233
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++SS + + P P C + IM KCW + D RP E++
Sbjct: 234 EISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 61/326 (18%)
Query: 79 EWEIELAKLDIRHEIARGTYGTV-------YRGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
+WE L + + G +G V +G VAVK+L +A +
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-------ENASPSE 69
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+R E V ++++HP+V K GA SQ ++VEY
Sbjct: 70 LR-DLLSEFNVLKQVNHPHVIKLYGAC---------SQDG-----------PLLLIVEYA 108
Query: 192 PGGTLKKFLIRNKR----------------------KKLAFKVVIQIALDLARGLSYLHS 229
G+L+ FL +++ + L +I A +++G+ YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 230 KTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKP 287
+VHRD+ N+L+ R +KI+DFG++R + + G + +MA E L
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI 228
Query: 288 YNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y + DV+SFG+ LWEI PYP + + + +++ R + P C + +M +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 347 CWDANPDKRPVMDEVVKLLEAVNTSK 372
CW PDKRPV ++ K LE + +
Sbjct: 288 CWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 60/305 (19%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L A+ G R+ ++QE+ + +
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCG-------PQHRSGWKQEIDILRT 72
Query: 146 LDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
L H ++ K+ G G +L++ V+EY+P G+L+ +L R+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQL--------------------VMEYVPLGSLRDYLPRH 112
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--- 260
+ ++ A + G++YLHS+ +HR++ N+LLD +R +KI DFG+A+
Sbjct: 113 S---IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 261 --EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSF 316
E R+ G++ Y APE L + DV+SFG+ L+E+ +C P F
Sbjct: 170 GHEYYRVRE-DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 227
Query: 317 TDV------------SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
++ + ++ + R P CP + +M+ CW+ RP + ++ +
Sbjct: 228 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPI 287
Query: 365 LEAVN 369
L+ V+
Sbjct: 288 LKTVH 292
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 44/301 (14%)
Query: 73 LPRKTEEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAA 130
+P + E++E+ + I G+YG R DG+ + K LD+ G +T AE
Sbjct: 1 MPSRAEDYEV-------LYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQ 50
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
+ + EV + ++L HPN+ ++ + TN + +V+EY
Sbjct: 51 MLVS----EVNLLRELKHPNIVRYYDRIIDRTNTTL------------------YIVMEY 88
Query: 191 LPGGTLKKFLIRN--KRKKLAFKVVIQIALDLARGLSYLHSK-----TIVHRDVKTENML 243
GG L + + +R+ L + V+++ L L H + T++HRD+K N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 244 LDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
LD + +K+ DFG+AR+ + GT YM+PE ++ YN K D++S G L+E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 304 IYCCDMPYPDLSFTDVSSA-VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ C MP P +F+ A +R+ IP L I+ + + RP ++E++
Sbjct: 209 L-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 363 K 363
+
Sbjct: 267 E 267
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 93 IARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I G +G V++ + DG+ +K + + + AE +EV KLDH N
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAE---------REVKALAKLDHVN 65
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV--EYLPGGTLKKFLIRNKRKKL 208
+ + G G + S NS S+ C+ + E+ GTL++++ + + +KL
Sbjct: 66 IVHYNGCWDGF------DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ +++ + +G+ Y+HSK +++RD+K N+ L + +KI DFG+ +N
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKR 178
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE-IYCCDMPYPDLS-FTDVSSAVVRQ 326
GTL YM+PE + + Y ++ D+Y+ G+ L E ++ CD + FTD+ ++
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGII-- 236
Query: 327 NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
DI ++++K P+ RP E+++ L
Sbjct: 237 ---SDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 47/308 (15%)
Query: 69 EREVLPRKTEEWEIELAK----------LDIR------HEIARGTYGTVYRGAYDGQDVA 112
+RE LP TE +E A LD + E+ G +GTV +G Y +
Sbjct: 337 QREALPMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQ---MK 393
Query: 113 VKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSAT 172
+ A + A A++ E V Q+LD+P + + IG
Sbjct: 394 KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-------------- 439
Query: 173 SDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTI 232
+ + +V+E G L K+L +N+ K K +I++ ++ G+ YL
Sbjct: 440 -------EAESWMLVMEMAELGPLNKYLQQNRHVK--DKNIIELVHQVSMGMKYLEESNF 490
Query: 233 VHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
VHRD+ N+LL KI+DFG++ R + + T + + APE ++ ++
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 290 RKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
K DV+SFG+ +WE + PY + ++V +A++ + R P CP + +M CW
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCW 609
Query: 349 DANPDKRP 356
+ + RP
Sbjct: 610 TYDVENRP 617
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 39/317 (12%)
Query: 68 REREVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD-----VAVKILDWAEDG 122
R E L K E+ I+ L + + G +G+V G +D VAVK +
Sbjct: 17 RGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS 76
Query: 123 MVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSR 182
E F E A + HPNV + +G + ++ IP
Sbjct: 77 QREIEE-------FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKP------------- 116
Query: 183 ACCVVVEYLPGGTLKKFLIRNKR----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVK 238
V++ ++ G L +L+ ++ K + + +++ +D+A G+ YL ++ +HRD+
Sbjct: 117 --MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLA 174
Query: 239 TENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYS 296
N +L + T+ +ADFG+++ G + ++A E L + Y K DV++
Sbjct: 175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWA 234
Query: 297 FGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
FG+ +WEI M PYP + ++ ++ + R P C L IM CW +P R
Sbjct: 235 FGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDR 293
Query: 356 PVMD----EVVKLLEAV 368
P ++ KLLE++
Sbjct: 294 PTFSVLRLQLEKLLESL 310
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 135/308 (43%), Gaps = 47/308 (15%)
Query: 69 EREVLPRKTEEWEIELAK----------LDIR------HEIARGTYGTVYRGAYDGQDVA 112
+RE LP TE +E A LD + E+ G +GTV +G Y +
Sbjct: 338 QREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQ---MK 394
Query: 113 VKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSAT 172
+ A + A A++ E V Q+LD+P + + IG
Sbjct: 395 KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-------------- 440
Query: 173 SDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTI 232
+ + +V+E G L K+L +N+ K K +I++ ++ G+ YL
Sbjct: 441 -------EAESWMLVMEMAELGPLNKYLQQNRHVK--DKNIIELVHQVSMGMKYLEESNF 491
Query: 233 VHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLDGKPYN 289
VHRD+ N+LL KI+DFG++ R + + T + + APE ++ ++
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 290 RKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCW 348
K DV+SFG+ +WE + PY + ++V +A++ + R P CP + +M CW
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCW 610
Query: 349 DANPDKRP 356
+ + RP
Sbjct: 611 TYDVENRP 618
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 47/321 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR--- 137
E EL KL + + G +GTV++G + + ++KI + E + R SF+
Sbjct: 30 ETELRKLKV---LGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVT 81
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+ LDH ++ + +G P + +V +YLP G+L
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLC---------------------PGSSLQLVTQYLPLGSLL 120
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+R R L ++++ + +A+G+ YL +VHR++ N+LL + +++ADFGV
Sbjct: 121 DH-VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 258 ARVEAQNPRDMT-GETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDL 314
A + + + + E T + +MA E + Y + DV+S+G+ +WE+ PY L
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 239
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE-------- 366
+V ++ + R P+ C + +M KCW + + RP E+
Sbjct: 240 RLAEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 298
Query: 367 --AVNTSKGGGMIPEDQAHGC 385
+ G G+ P + HG
Sbjct: 299 YLVIKRESGPGIAPGPEPHGL 319
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 93 IARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G++G V++G + Q VA+KI+D E A +QE+ V + D
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--------AEDEIEDIQQEITVLSQCDSSY 82
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
VTK+ G+ + + L +++EYL GG+ L +
Sbjct: 83 VTKYYGSYLKGSKL--------------------WIIMEYLGGGSALDLLRAGPFDEFQI 122
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
+++ ++ +GL YLHS+ +HRD+K N+LL +K+ADFGVA
Sbjct: 123 ATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 271 ETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRP 330
GT +MAPEV+ Y+ K D++S GI E+ + P D+ V + + N P
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-PP 238
Query: 331 DIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPE 379
+ S + C + +P RP E++K V SK + E
Sbjct: 239 TLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTE 287
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 47/320 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR--- 137
E EL KL + + G +GTV++G + + ++KI + E + R SF+
Sbjct: 12 ETELRKLKV---LGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVT 63
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+ LDH ++ + +G P + +V +YLP G+L
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLC---------------------PGSSLQLVTQYLPLGSLL 102
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+R R L ++++ + +A+G+ YL +VHR++ N+LL + +++ADFGV
Sbjct: 103 DH-VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV 161
Query: 258 ARVEAQNPRDMT-GETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDL 314
A + + + + E T + +MA E + Y + DV+S+G+ +WE+ PY L
Sbjct: 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE-------- 366
+V ++ + R P+ C + +M KCW + + RP E+
Sbjct: 222 RLAEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 280
Query: 367 --AVNTSKGGGMIPEDQAHG 384
+ G G+ P + HG
Sbjct: 281 YLVIKRESGPGIAPGPEPHG 300
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 44/301 (14%)
Query: 73 LPRKTEEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAA 130
+P + E++E+ + I G+YG R DG+ + K LD+ G +T AE
Sbjct: 1 MPSRAEDYEV-------LYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQ 50
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
+ + EV + ++L HPN+ ++ + TN + +V+EY
Sbjct: 51 MLVS----EVNLLRELKHPNIVRYYDRIIDRTNTTL------------------YIVMEY 88
Query: 191 LPGGTLKKFLIR--NKRKKLAFKVVIQIALDLARGLSYLHSK-----TIVHRDVKTENML 243
GG L + + +R+ L + V+++ L L H + T++HRD+K N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 244 LDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
LD + +K+ DFG+AR+ + GT YM+PE ++ YN K D++S G L+E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 304 IYCCDMPYPDLSFTDVSSA-VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ C MP P +F+ A +R+ IP L I+ + + RP ++E++
Sbjct: 209 L-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 363 K 363
+
Sbjct: 267 E 267
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 53/303 (17%)
Query: 89 IRHEIARGTYGTVYRGA-------YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
++ E+ G +G V+ D VAVK L A + + R F++E
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---------SARQDFQREAE 95
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L H ++ +F G R +V EY+ G L +FL
Sbjct: 96 LLTMLQHQHIVRFFGVCT--------------------EGRPLLMVFEYMRHGDLNRFLR 135
Query: 202 RN-------------KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
+ L ++ +A +A G+ YL VHRD+ T N L+
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 195
Query: 249 TLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+KI DFG++R + + + + G T + +M PE + + + + DV+SFG+ LWEI+
Sbjct: 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
Query: 307 CD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
P+ LS T+ + Q + PR CP + +IMR CW P +R + +V L
Sbjct: 256 YGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
Query: 366 EAV 368
+A+
Sbjct: 315 QAL 317
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 60/305 (19%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L A+ G R+ ++QE+ + +
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCG-------PQHRSGWKQEIDILRT 72
Query: 146 LDHPNVTKFIGA--SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
L H ++ K+ G G +L++ V+EY+P G+L+ +L R+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQL--------------------VMEYVPLGSLRDYLPRH 112
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--- 260
+ ++ A + G++YLH++ +HR++ N+LLD +R +KI DFG+A+
Sbjct: 113 S---IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 261 --EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSF 316
E R+ G++ Y APE L + DV+SFG+ L+E+ +C P F
Sbjct: 170 GHEYYRVRE-DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 227
Query: 317 TDV------------SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
++ + ++ + R P CP + +M+ CW+ RP + ++ +
Sbjct: 228 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPI 287
Query: 365 LEAVN 369
L+ V+
Sbjct: 288 LKTVH 292
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 44/301 (14%)
Query: 73 LPRKTEEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAA 130
+P + E++E+ + I G+YG R DG+ + K LD+ G +T AE
Sbjct: 1 MPSRAEDYEV-------LYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQ 50
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
+ + EV + ++L HPN+ ++ + TN + +V+EY
Sbjct: 51 MLVS----EVNLLRELKHPNIVRYYDRIIDRTNTTL------------------YIVMEY 88
Query: 191 LPGGTLKKFLIR--NKRKKLAFKVVIQIALDLARGLSYLHSK-----TIVHRDVKTENML 243
GG L + + +R+ L + V+++ L L H + T++HRD+K N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 244 LDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
LD + +K+ DFG+AR+ + GT YM+PE ++ YN K D++S G L+E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 304 IYCCDMPYPDLSFTDVSSA-VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ C MP P +F+ A +R+ IP L I+ + + RP ++E++
Sbjct: 209 L-CALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 363 K 363
+
Sbjct: 267 E 267
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 94 ARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
G +G VY+G + VAVK L D +T+ E ++ F QE+ V K H N+ +
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVXAKCQHENLVE 85
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKLAFKV 212
+G S +L C+V Y P G+L + + L++
Sbjct: 86 LLGFSSDGDDL--------------------CLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 213 VIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE- 271
+IA A G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 126 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 272 -TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
GT Y APE L G+ K D+YSFG+ L EI
Sbjct: 186 IVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEI 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 49/307 (15%)
Query: 86 KLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ +I G +G V++ G + + M+ +A ++A F++E A+ +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 146 LDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL---- 200
D+PN+ K +G ++G + C++ EY+ G L +FL
Sbjct: 107 FDNPNIVKLLGVCAVG---------------------KPMCLLFEYMAYGDLNEFLRSMS 145
Query: 201 -----------IRNKRK-------KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
+ + + L+ + IA +A G++YL + VHRD+ T N
Sbjct: 146 PHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC 205
Query: 243 LLDANRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
L+ N +KIADFG++R A + + + +M PE + Y + DV+++G+
Sbjct: 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 265
Query: 301 LWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
LWEI+ + PY ++ +V V N+ P CP L ++MR CW P RP
Sbjct: 266 LWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFC 324
Query: 360 EVVKLLE 366
+ ++L+
Sbjct: 325 SIHRILQ 331
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 53/303 (17%)
Query: 89 IRHEIARGTYGTVYRGA-------YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
++ E+ G +G V+ D VAVK L A + + R F++E
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---------SARQDFQREAE 66
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L H ++ +F G R +V EY+ G L +FL
Sbjct: 67 LLTMLQHQHIVRFFGVCT--------------------EGRPLLMVFEYMRHGDLNRFLR 106
Query: 202 RN-------------KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
+ L ++ +A +A G+ YL VHRD+ T N L+
Sbjct: 107 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 166
Query: 249 TLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+KI DFG++R + + + + G T + +M PE + + + + DV+SFG+ LWEI+
Sbjct: 167 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
P+ LS T+ + Q + PR CP + +IMR CW P +R + +V L
Sbjct: 227 YGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
Query: 366 EAV 368
+A+
Sbjct: 286 QAL 288
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGA-------YDGQDVAVKILDWAEDGMVTSAEAAAIR 133
I+ + ++ E+ G +G V+ D VAVK L A D R
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA---------R 59
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
F +E + L H ++ KF G + L +V EY+
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPL--------------------IMVFEYMKH 99
Query: 194 GTLKKFLIR-----------NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
G L KFL N +L ++ IA +A G+ YL S+ VHRD+ T N
Sbjct: 100 GDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNC 159
Query: 243 LLDANRTLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGIC 300
L+ N +KI DFG++R V + + + G T + +M PE + + + + DV+S G+
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
LWEI+ P+ LS +V + + + PR CP + +M CW P R +
Sbjct: 220 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMRKNIK 278
Query: 360 EVVKLLE 366
+ LL+
Sbjct: 279 GIHTLLQ 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 53/303 (17%)
Query: 89 IRHEIARGTYGTVYRGA-------YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
++ E+ G +G V+ D VAVK L A + + R F++E
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---------SARQDFQREAE 72
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ L H ++ +F G R +V EY+ G L +FL
Sbjct: 73 LLTMLQHQHIVRFFGVCT--------------------EGRPLLMVFEYMRHGDLNRFLR 112
Query: 202 RN-------------KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
+ L ++ +A +A G+ YL VHRD+ T N L+
Sbjct: 113 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 172
Query: 249 TLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+KI DFG++R + + + + G T + +M PE + + + + DV+SFG+ LWEI+
Sbjct: 173 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
Query: 307 C-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
P+ LS T+ + Q + PR CP + +IMR CW P +R + +V L
Sbjct: 233 YGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
Query: 366 EAV 368
+A+
Sbjct: 292 QAL 294
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 12 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 69 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 105
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 224
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 225 ERMGCPAGCPREMYDLMNLCWTYDVENRP 253
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 18 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 75 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 111
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 230
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 231 ERMGCPAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 32 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 89 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 125
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 244
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 245 ERMGCPAGCPREMYDLMNLCWTYDVENRP 273
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 24 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 81 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 117
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 236
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 237 ERMGCPAGCPREMYDLMNLCWTYDVENRP 265
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 14 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 71 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 107
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 226
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 227 ERMGCPAGCPREMYDLMNLCWTYDVENRP 255
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 60/305 (19%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L +R+ +++E+ + +
Sbjct: 15 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--------EGCGPQLRSGWQREIEILRT 66
Query: 146 LDHPNVTKFIGAS--MGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
L H ++ K+ G G ++++ V+EY+P G+L+ +L R+
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQL--------------------VMEYVPLGSLRDYLPRH 106
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--- 260
+ ++ A + G++YLH++ +HR + N+LLD +R +KI DFG+A+
Sbjct: 107 C---VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 261 --EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSF 316
E R+ G++ Y APE L + DV+SFG+ L+E+ YC P F
Sbjct: 164 GHEYYRVRE-DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKF 221
Query: 317 TDV------------SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
T++ + ++ + R P CP + +M+ CW+ RP +V +
Sbjct: 222 TELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPI 281
Query: 365 LEAVN 369
L+
Sbjct: 282 LQTAQ 286
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 60/305 (19%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ G +G V YD G+ VAVK L +R+ +++E+ + +
Sbjct: 16 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--------EGCGPQLRSGWQREIEILRT 67
Query: 146 LDHPNVTKFIGAS--MGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
L H ++ K+ G G ++++ V+EY+P G+L+ +L R+
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQL--------------------VMEYVPLGSLRDYLPRH 107
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--- 260
+ ++ A + G++YLH++ +HR + N+LLD +R +KI DFG+A+
Sbjct: 108 C---VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 261 --EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSF 316
E R+ G++ Y APE L + DV+SFG+ L+E+ YC P F
Sbjct: 165 GHEYYRVRE-DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKF 222
Query: 317 TDV------------SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
T++ + ++ + R P CP + +M+ CW+ RP +V +
Sbjct: 223 TELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPI 282
Query: 365 LEAVN 369
L+
Sbjct: 283 LQTAQ 287
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 18 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 75 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 111
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 230
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 231 ERMGCPAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 34 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 91 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 127
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 246
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 247 ERMGCPAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
E+ G +GTV +G Y + + A + A A++ E V Q+LD+P +
Sbjct: 34 ELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+ IG + + +V+E G L K+L +N+ K K
Sbjct: 91 VRMIGIC---------------------EAESWMLVMEMAELGPLNKYLQQNRHVK--DK 127
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDM 268
+I++ ++ G+ YL VHRD+ N+LL KI+DFG++ R + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQN 327
T + + APE ++ ++ K DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKG 246
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRP 356
R P CP + +M CW + + RP
Sbjct: 247 ERMGCPAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 57/309 (18%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ +G +G+V YD G VAVK L + + F++E+ + +
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---------GPDQQRDFQREIQILKA 68
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L + K+ G S G P + + +V+EYLP G L+ FL R+ R
Sbjct: 69 LHSDFIVKYRGVSYG------PGRQSLR------------LVMEYLPSGCLRDFLQRH-R 109
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+L ++ + + +G+ YL S+ VHRD+ N+L+++ +KIADFG+A++ P
Sbjct: 110 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL---LP 166
Query: 266 RD----MTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFT 317
D + E G + + APE L ++R+ DV+SFG+ L+E+ YC P F
Sbjct: 167 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 226
Query: 318 DVSS------AVVRQNL------RPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ A+ R R P CP+ + +M+ CW +P RP + L
Sbjct: 227 RMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286
Query: 366 EAVNTSKGG 374
+ + + G
Sbjct: 287 DMLWSGSRG 295
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 59/310 (19%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ +G +G+V YD G VAVK L + + F++E+ + +
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---------GPDQQRDFQREIQILKA 67
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC-VVVEYLPGGTLKKFLIRNK 204
L + K+ G S G P R +V+EYLP G L+ FL R+
Sbjct: 68 LHSDFIVKYRGVSYG-------------------PGRQSLRLVMEYLPSGCLRDFLQRH- 107
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
R +L ++ + + +G+ YL S+ VHRD+ N+L+++ +KIADFG+A++
Sbjct: 108 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL---L 164
Query: 265 PRD----MTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSF 316
P D + E G + + APE L ++R+ DV+SFG+ L+E+ YC P F
Sbjct: 165 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 224
Query: 317 TDVSS------AVVRQNL------RPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
+ A+ R R P CP+ + +M+ CW +P RP +
Sbjct: 225 LRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 284
Query: 365 LEAVNTSKGG 374
L+ + + G
Sbjct: 285 LDMLWSGSRG 294
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 135/277 (48%), Gaps = 34/277 (12%)
Query: 91 HEIARGTYG--TVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I G++G + + DG+ +K ++ + ++S E R R+EVAV + H
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISR---MSSKE----REESRREVAVLANMKH 82
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ + + + SL +V++Y GG L K + N +K +
Sbjct: 83 PNIVQY---------------RESFEENGSL-----YIVMDYCEGGDLFKRI--NAQKGV 120
Query: 209 AFK--VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
F+ ++ + + L ++H + I+HRD+K++N+ L + T+++ DFG+ARV
Sbjct: 121 LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
GT Y++PE+ + KPYN K D+++ G L+E+ + S ++ ++
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG 240
Query: 327 NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
+ P + L S++ + + NP RP ++ +++
Sbjct: 241 SF-PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 84 LAKLDIRHEIARGTYGTVYRGA--YDGQDVAVK---ILDWAEDGMVTSAEAAAIRASFRQ 138
LA I +I RG + VYR A DG VA+K I D + A RA +
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD---------AKARADCIK 81
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E+ + ++L+HPNV K+ + + L I V+E G L +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNI--------------------VLELADAGDLSR 121
Query: 199 FLIRNKRKK--LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ K++K + + V + + L L ++HS+ ++HRD+K N+ + A +K+ D G
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY--PDL 314
+ R + GT YM+PE + YN K D++S G L+E+ P+ +
Sbjct: 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRP---VMDEVVKLLEAVNTS 371
+ + + + + P L ++ C + +P+KRP + +V K + A S
Sbjct: 242 NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 57/309 (18%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ +G +G+V YD G VAVK L + + F++E+ + +
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---------GPDQQRDFQREIQILKA 80
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L + K+ G S G P + + +V+EYLP G L+ FL R+ R
Sbjct: 81 LHSDFIVKYRGVSYG------PGRQSLR------------LVMEYLPSGCLRDFLQRH-R 121
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+L ++ + + +G+ YL S+ VHRD+ N+L+++ +KIADFG+A++ P
Sbjct: 122 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL---LP 178
Query: 266 RD----MTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFT 317
D + E G + + APE L ++R+ DV+SFG+ L+E+ YC P F
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238
Query: 318 DVSS------AVVRQNL------RPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ A+ R R P CP+ + +M+ CW +P RP + L
Sbjct: 239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
Query: 366 EAVNTSKGG 374
+ + + G
Sbjct: 299 DMLWSGSRG 307
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 136 FRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E+ V KL HPN+ +GA L + +EY P G
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHG 111
Query: 195 TLKKFLIRNK--------------RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
L FL +++ L+ + ++ A D+ARG+ YL K +HRD+
Sbjct: 112 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 171
Query: 241 NMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
N+L+ N KIADFG++R + + G + +MA E L+ Y DV+S+G+
Sbjct: 172 NILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
LWEI PY ++ ++ + Q R + P C + +MR+CW P +RP
Sbjct: 231 LWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 289
Query: 360 EVV 362
+++
Sbjct: 290 QIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 136 FRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E+ V KL HPN+ +GA L + +EY P G
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHG 101
Query: 195 TLKKFLIRNK--------------RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
L FL +++ L+ + ++ A D+ARG+ YL K +HRD+
Sbjct: 102 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 161
Query: 241 NMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
N+L+ N KIADFG++R + + G + +MA E L+ Y DV+S+G+
Sbjct: 162 NILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVL 220
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
LWEI PY ++ ++ + Q R + P C + +MR+CW P +RP
Sbjct: 221 LWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 279
Query: 360 EVV 362
+++
Sbjct: 280 QIL 282
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 51/288 (17%)
Query: 92 EIARGTYGTVYRGAYD------GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
++ +G +G+V YD G VAVK L + + F++E+ + +
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---------GPDQQRDFQREIQILKA 64
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L + K+ G S G ++ +V+EYLP G L+ FL R+ R
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELR------------------LVMEYLPSGCLRDFLQRH-R 105
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQN 264
+L ++ + + +G+ YL S+ VHRD+ N+L+++ +KIADFG+A+ +
Sbjct: 106 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 265 PRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFTDVS 320
+ E G + + APE L ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM 225
Query: 321 S------AVVRQNL------RPDIPRCCPSSLASIMRKCWDANPDKRP 356
A+ R R P CP+ + +M+ CW +P RP
Sbjct: 226 GCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 273
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 38/270 (14%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + Q+ AVK+++ A SA+ R EV + +KLDHPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILR-EVELLKKLDHPN 82
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K +I S+ + +V E GG L +I KRK+ +
Sbjct: 83 IMKL---------FEILEDSS-----------SFYIVGELYTGGELFDEII--KRKRFSE 120
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNPRD 267
+I + G++Y+H IVHRD+K EN+LL++ +KI DFG++ QN +
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK- 179
Query: 268 MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQN 327
M GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V
Sbjct: 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 328 LRPDIP--RCCPSSLASIMRKCWDANPDKR 355
D+P R ++RK +P R
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 55/291 (18%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G +G V R A D + A+K + E+ + T EV + L+H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----------ILSEVMLLASLNHQY 63
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIR---NKRKK 207
V ++ A + N P + S + +EY GTL + N+++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKS-------TLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA--------- 258
+++ QI LSY+HS+ I+HRD+K N+ +D +R +KI DFG+A
Sbjct: 117 EYWRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 259 -RVEAQN----PRDMTGETGTLGYMAPEVLDGK-PYNRKCDVYSFGICLWEIYCCDMPYP 312
++++QN ++T GT Y+A EVLDG YN K D+YS GI +E M YP
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIYP 227
Query: 313 DLSFTDVSSAVVRQNLR-------PDIPRCCPSSLASIMRKCWDANPDKRP 356
T + + + LR PD I+R D +P+KRP
Sbjct: 228 --FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ + AIR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV----PSTAIR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GLS+ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 136 FRQEVAVWQKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
F E+ V KL HPN+ +GA L + +EY P G
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHG 108
Query: 195 TLKKFLIRNK--------------RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
L FL +++ L+ + ++ A D+ARG+ YL K +HR++
Sbjct: 109 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAAR 168
Query: 241 NMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
N+L+ N KIADFG++R + + G + +MA E L+ Y DV+S+G+
Sbjct: 169 NILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVL 227
Query: 301 LWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
LWEI PY ++ ++ + Q R + P C + +MR+CW P +RP
Sbjct: 228 LWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 286
Query: 360 EVV 362
+++
Sbjct: 287 QIL 289
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 71/302 (23%)
Query: 94 ARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ--KLDHPNV 151
ARG +G V++ + VAVKI + + S++ E V+ + H N+
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQD------------KQSWQNEYEVYSLPGMKHENI 80
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFK 211
+FIGA T++ + ++ + G+L FL K +++
Sbjct: 81 LQFIGAEKRGTSVDVD----------------LWLITAFHEKGSLSDFL---KANVVSWN 121
Query: 212 VVIQIALDLARGLSYLHSK----------TIVHRDVKTENMLLDANRTLKIADFGVA-RV 260
+ IA +ARGL+YLH I HRD+K++N+LL N T IADFG+A +
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 261 EA-QNPRDMTGETGTLGYMAPEVLDGK-PYNR----KCDVYSFGICLWEI----YCCDMP 310
EA ++ D G+ GT YMAPEVL+G + R + D+Y+ G+ LWE+ D P
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 311 YPDL------------SFTDVSSAVVRQNLRPDI-----PRCCPSSLASIMRKCWDANPD 353
+ S D+ VV + RP + + L + +CWD + +
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
Query: 354 KR 355
R
Sbjct: 302 AR 303
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 67 SREREVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTS 126
++ER L K + + EL K+ + +G++G V+ + + I +D ++
Sbjct: 5 NKERPSLQIKLKIEDFELHKM-----LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD 59
Query: 127 AEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCV 186
+ R W+ HP +T NL
Sbjct: 60 DDVECTMVEKRVLSLAWE---HPFLTHMFCTFQTKENL--------------------FF 96
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
V+EYL GG L + K A ++ GL +LHSK IV+RD+K +N+LLD
Sbjct: 97 VMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK 154
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+ +KIADFG+ + GT Y+APE+L G+ YN D +SFG+ L+E+
Sbjct: 155 DGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 214
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ ++ ++ N P PR ++ K + P+KR
Sbjct: 215 GQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 45/283 (15%)
Query: 89 IRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
++ I +G + V R G++VAVKI+D T +++ FR EV + + L
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDK------TQLNPTSLQKLFR-EVRIMKIL 71
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI----- 201
+HPN+ K I ++ + +V+EY GG + +L+
Sbjct: 72 NHPNIVKLFEV--------IETE------------KTLYLVMEYASGGEVFDYLVAHGRM 111
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVE 261
+ K + F+ ++ + Y H K IVHRD+K EN+LLD + +KIADFG + E
Sbjct: 112 KEKEARAKFRQIVS-------AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-E 163
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
+ G+ Y APE+ GK Y+ + DV+S G+ L+ + +P+ + ++
Sbjct: 164 FTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 223
Query: 321 SAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
V+R R IP + ++++K NP KR +++++K
Sbjct: 224 ERVLRGKYR--IPFYMSTDCENLLKKLLVLNPIKRGSLEQIMK 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 62
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 63 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 97
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 98 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 157
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 158 KEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 217
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 218 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 57
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 58 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 153 KEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 213 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 57
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 58 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 153 KEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 213 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 60
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 61 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 95
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 96 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 155
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 156 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 215
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 216 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 87 LDIRHEIARGTYGTVYRGAY-DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D + I G +G VY+G DG VA+K + E++ F E+
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSF 91
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK- 204
HP++ IG D N + ++ +Y+ G LK+ L +
Sbjct: 92 CRHPHLVSLIG---------------FCDERNEM-----ILIYKYMENGNLKRHLYGSDL 131
Query: 205 -RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR--VE 261
++++ ++I + ARGL YLH++ I+HRDVK+ N+LLD N KI DFG+++ E
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC------DMPYPDLS 315
GTLGY+ PE K DVYSFG+ L+E+ C +P ++
Sbjct: 192 LDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 316 FTD-----VSSAVVRQNLRPDIP-RCCPSSL---ASIMRKCWDANPDKRPVMDEVVKLLE 366
+ ++ + Q + P++ + P SL KC + + RP M +V+ LE
Sbjct: 252 LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 67
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 68 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 106
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 107 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 166
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 327 NLRPD 331
PD
Sbjct: 227 LGTPD 231
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 57
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 58 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 153 KEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 213 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 18/298 (6%)
Query: 79 EWEIELAKLDIRHEIARGTYGTVYRGAYDGQ-------DVAVKILDWAEDGMVTSAEAAA 131
+WE L+ + G +G V G VAVK+L D S+E A
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREA 94
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGA-SMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
+ + + + Q H N+ +GA ++ I D N L S+ +
Sbjct: 95 LMSELKM---MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTL 250
+ K+ L F+ ++ A +A+G+ +L K+ VHRD+ N+L+ + +
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV 211
Query: 251 KIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
KI DFG+AR + + L +MAPE L Y K DV+S+GI LWEI+
Sbjct: 212 KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 309 M-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
+ PYP + +++ + D P + IM+ CW + KRP + L
Sbjct: 272 VNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 57
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 58 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 213 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 32/277 (11%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
++ + D + +GT+G V R G+ A+KIL ++ ++ E A R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL--RKEVIIAKDEVAHTVTESR- 57
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 58 ---VLQNTRHPFLTA----------LKYAFQT-----HDRL-----CFVMEYANGGEL-- 92
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
F ++ + + ++ L YLHS+ +V+RD+K EN++LD + +KI DFG+
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 213 LFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 87 LDIRHEIARGTYGTVYRGAY-DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D + I G +G VY+G DG VA+K + E++ F E+
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSF 91
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK- 204
HP++ IG D N + ++ +Y+ G LK+ L +
Sbjct: 92 CRHPHLVSLIG---------------FCDERNEM-----ILIYKYMENGNLKRHLYGSDL 131
Query: 205 -RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR--VE 261
++++ ++I + ARGL YLH++ I+HRDVK+ N+LLD N KI DFG+++ E
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC------DMPYPDLS 315
GTLGY+ PE K DVYSFG+ L+E+ C +P ++
Sbjct: 192 LGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 316 FTD-----VSSAVVRQNLRPDIP-RCCPSSL---ASIMRKCWDANPDKRPVMDEVVKLLE 366
+ ++ + Q + P++ + P SL KC + + RP M +V+ LE
Sbjct: 252 LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 31/243 (12%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I GTYG VY R G+ VA+K + D + AIR E+++ ++L+HP
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTAIR-----EISLLKELNHP 66
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ K + + T N +V E+L LKKF+ + +
Sbjct: 67 NIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIP 105
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R T
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 165
Query: 270 GETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNL 328
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 166 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
Query: 329 RPD 331
PD
Sbjct: 226 TPD 228
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 60 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 87 LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
+I + +G +G VY R VA+K+L + E + R+E+ +
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVL------FKSQIEKEGVEHQLRREIEIQA 78
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
L HPN+ + R +++EY P G L K L
Sbjct: 79 HLHHPNILRLYNYFYD--------------------RRRIYLILEYAPRGELYKEL---- 114
Query: 205 RKKLAF--KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
+K F + I +LA L Y H K ++HRD+K EN+LL LKIADFG + V A
Sbjct: 115 QKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHA 173
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
+ R T GTL Y+ PE+++G+ +N K D++ G+ +E+ + P+ S +
Sbjct: 174 PSLRRKTM-CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 323 VVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+V+ +L+ P P+ ++ K NP +R + +V
Sbjct: 233 IVKVDLK--FPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 100
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 161 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 327 NLRPD 331
PD
Sbjct: 221 LGTPD 225
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 60 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 67
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 68 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 106
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 107 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 166
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 327 NLRPD 331
PD
Sbjct: 227 LGTPD 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
+V+EY+ G TL +++ L+ I + G+ + H IVHRD+K +N+L+D
Sbjct: 88 LVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+N+TLKI DFG+A+ ++ T GT+ Y +PE G+ + D+YS GI L+E+
Sbjct: 146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
Query: 305 YCCDMPYPDLSFTDVSSAVVRQ---NLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ P+ + ++ ++ N+ D+ + P SL++++ + + + R
Sbjct: 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 40/280 (14%)
Query: 84 LAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAE--DGMVTSAEAAAIRASFRQEVA 141
K DI EI RG++ TVY+G V V W E D +T +E R F++E
Sbjct: 27 FLKFDI--EIGRGSFKTVYKGLDTETTVEVA---WCELQDRKLTKSE----RQRFKEEAE 77
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDS-HNSLPSRACCVVV-EYLPGGTLKKF 199
+ L HPN+ +F DS +++ + C V+V E GTLK +
Sbjct: 78 XLKGLQHPNIVRFY------------------DSWESTVKGKKCIVLVTELXTSGTLKTY 119
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLLDA-NRTLKIADFG 256
L R K K+ KV+ + +GL +LH++T I+HRD+K +N+ + ++KI D G
Sbjct: 120 LKRFKVXKI--KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+A ++ + GT + APE + K Y+ DVY+FG C E + PY +
Sbjct: 178 LATLKRASFAKAV--IGTPEFXAPEXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQN 234
Query: 317 TDVSSAVVRQNLRP-DIPRCCPSSLASIMRKCWDANPDKR 355
V ++P + + I+ C N D+R
Sbjct: 235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 274
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 33/256 (12%)
Query: 107 DGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNL 164
D +DVAVK+L D A D + FR+E L+HP + A T
Sbjct: 36 DHRDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYDTGEA 83
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGL 224
+ P+ LP +V+EY+ G TL+ I + + K I++ D + L
Sbjct: 84 ETPA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 225 SYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPE 281
++ H I+HRDVK N+++ A +K+ DFG+AR A + +T +G Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSS 339
G + + DVYS G L+E+ + P+ S V+ VR++ P R +
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 340 LASIMRKCWDANPDKR 355
L +++ K NP+ R
Sbjct: 250 LDAVVLKALAKNPENR 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 38/270 (14%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + Q+ AVK+++ A SA+ R EV + +KLDHPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILR-EVELLKKLDHPN 82
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K +++ I V E GG L +I KRK+ +
Sbjct: 83 IMKLFEILEDSSSFYI--------------------VGELYTGGELFDEII--KRKRFSE 120
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNPRD 267
+I + G++Y+H IVHRD+K EN+LL++ +KI DFG++ QN +
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK- 179
Query: 268 MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQN 327
M GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V
Sbjct: 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 328 LRPDIP--RCCPSSLASIMRKCWDANPDKR 355
D+P R ++RK +P R
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 37/281 (13%)
Query: 87 LDIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
D+ ++ G+YG+VY+ + GQ VA+K + D +E+++ Q
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----------LQEIIKEISIMQ 79
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
+ D P+V K+ G+ T+L +V+EY G++ +IR +
Sbjct: 80 QCDSPHVVKYYGSYFKNTDL--------------------WIVMEYCGAGSVSD-IIRLR 118
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
K L + I +GL YLH +HRD+K N+LL+ K+ADFGVA
Sbjct: 119 NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDX 178
Query: 265 PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
GT +MAPEV+ YN D++S GI E+ PY D+ + ++
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-AIFMI 237
Query: 325 RQNLRPDI--PRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
N P P + +++C +P++R ++++
Sbjct: 238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 35/249 (14%)
Query: 84 LAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
L I + G++G V+ R ++G+ A+K+L ++E+
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL--------------------KKEIV 44
Query: 142 V-WQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
V ++++H N + + S+ T I D+ + ++++Y+ GG L F
Sbjct: 45 VRLKQVEHTNDERLM-LSIVTHPFIIRMWGTFQDA------QQIFMIMDYIEGGEL--FS 95
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
+ K ++ V A ++ L YLHSK I++RD+K EN+LLD N +KI DFG A+
Sbjct: 96 LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY 155
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
P GT Y+APEV+ KPYN+ D +SFGI ++E+ P+ D +
Sbjct: 156 V---PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
Query: 321 SAVVRQNLR 329
++ LR
Sbjct: 213 EKILNAELR 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYL--------------------VFEFL-SMDLKKFMDASALTG 100
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K EN+L++ +K+ADFG+AR R
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 327 NLRPD 331
PD
Sbjct: 221 LGTPD 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 62
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 101
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K EN+L++ +K+ADFG+AR R
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 327 NLRPD 331
PD
Sbjct: 222 LGTPD 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYL--------------------VFEFL-SMDLKKFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K EN+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 100
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K EN+L++ +K+ADFG+AR R
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 327 NLRPD 331
PD
Sbjct: 221 LGTPD 225
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 38/270 (14%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + Q+ AVK+++ A SA+ R EV + +KLDHPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA------SAKNKDTSTILR-EVELLKKLDHPN 82
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K +++ I V E GG L +I KRK+ +
Sbjct: 83 IMKLFEILEDSSSFYI--------------------VGELYTGGELFDEII--KRKRFSE 120
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNPRD 267
+I + G++Y+H IVHRD+K EN+LL++ +KI DFG++ QN +
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK- 179
Query: 268 MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQN 327
M GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V
Sbjct: 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 328 LRPDIP--RCCPSSLASIMRKCWDANPDKR 355
D+P R ++RK +P R
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 33/256 (12%)
Query: 107 DGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNL 164
D +DVAVK+L D A D + FR+E L+HP + A T
Sbjct: 36 DHRDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYDTGEA 83
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGL 224
+ P+ LP +V+EY+ G TL+ I + + K I++ D + L
Sbjct: 84 ETPA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 225 SYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPE 281
++ H I+HRDVK N+++ A +K+ DFG+AR A + +T +G Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSS 339
G + + DVYS G L+E+ + P+ S V+ VR++ P R +
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSAD 249
Query: 340 LASIMRKCWDANPDKR 355
L +++ K NP+ R
Sbjct: 250 LDAVVLKALAKNPENR 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 27/281 (9%)
Query: 75 RKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA 134
R + + ++++ + + +G++G V+ + + I +D ++ +
Sbjct: 7 RPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMV 66
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
R W+ HP +T NL V+EYL GG
Sbjct: 67 EKRVLSLAWE---HPFLTHMFCTFQTKENL--------------------FFVMEYLNGG 103
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L + K A ++ GL +LHSK IV+RD+K +N+LLD + +KIAD
Sbjct: 104 DLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIAD 161
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG+ + GT Y+APE+L G+ YN D +SFG+ L+E+ P+
Sbjct: 162 FGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
++ ++ N P PR ++ K + P+KR
Sbjct: 222 DEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAV-KI-LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+ KI LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAV-KI-LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+ KI LD +G+ ++A IR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 60 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 107 DGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNL 164
D +DVAVK+L D A D + FR+E L+HP + A T
Sbjct: 36 DHRDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYDTGEA 83
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGL 224
+ P+ LP +V+EY+ G TL+ I + + K I++ D + L
Sbjct: 84 ETPA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 225 SYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPE 281
++ H I+HRDVK N+L+ A +K+ DFG+AR A + + +G Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSS 339
G + + DVYS G L+E+ + P+ S V+ VR++ P R +
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 340 LASIMRKCWDANPDKR 355
L +++ K NP+ R
Sbjct: 250 LDAVVLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 109 QDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKI 166
+DVAVK+L D A D + FR+E L+HP + A T +
Sbjct: 38 RDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYATGEAET 85
Query: 167 PSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSY 226
P+ LP +V+EY+ G TL+ I + + K I++ D + L++
Sbjct: 86 PA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNF 131
Query: 227 LHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVL 283
H I+HRDVK N+++ A +K+ DFG+AR A + +T +G Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 284 DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSSLA 341
G + + DVYS G L+E+ + P+ S V+ VR++ P R + L
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 251
Query: 342 SIMRKCWDANPDKR 355
+++ K NP+ R
Sbjct: 252 AVVLKALAKNPENR 265
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 55/291 (18%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G +G V R A D + A+K + E+ + T EV + L+H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----------ILSEVMLLASLNHQY 63
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIR---NKRKK 207
V ++ A + N P + S + +EY TL + N+++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKS-------TLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA--------- 258
+++ QI LSY+HS+ I+HRD+K N+ +D +R +KI DFG+A
Sbjct: 117 EYWRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 259 -RVEAQN----PRDMTGETGTLGYMAPEVLDGK-PYNRKCDVYSFGICLWEIYCCDMPYP 312
++++QN ++T GT Y+A EVLDG YN K D+YS GI +E M YP
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIYP 227
Query: 313 DLSFTDVSSAVVRQNLR-------PDIPRCCPSSLASIMRKCWDANPDKRP 356
T + + + LR PD I+R D +P+KRP
Sbjct: 228 --FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ + AIR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGV----PSTAIR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + + D LK F+ +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQD---------------------LKTFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
T E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + + D LKKF+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD---------------------LKKFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 109 QDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKI 166
+DVAVK+L D A D + FR+E L+HP + A T +
Sbjct: 38 RDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYDTGEAET 85
Query: 167 PSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSY 226
P+ LP +V+EY+ G TL+ I + + K I++ D + L++
Sbjct: 86 PA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNF 131
Query: 227 LHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVL 283
H I+HRDVK N+++ A +K+ DFG+AR A + +T +G Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 284 DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSSLA 341
G + + DVYS G L+E+ + P+ S V+ VR++ P R + L
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 251
Query: 342 SIMRKCWDANPDKR 355
+++ K NP+ R
Sbjct: 252 AVVLKALAKNPENR 265
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 62
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 101
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 327 NLRPD 331
PD
Sbjct: 222 LGTPD 226
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 62
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 101
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 327 NLRPD 331
PD
Sbjct: 222 LGTPD 226
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 100
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 327 NLRPD 331
PD
Sbjct: 221 LGTPD 225
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 60 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 59
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 60 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 98
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 327 NLRPD 331
PD
Sbjct: 219 LGTPD 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 42/273 (15%)
Query: 96 GTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
GT+G V G ++ G VAVKIL+ + + + R+E+ + HP++ K
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQK------IRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVV 213
S SD +V+EY+ GG L ++ +N R L K
Sbjct: 81 LYQVI-----------STPSD---------IFMVMEYVSGGELFDYICKNGR--LDEKES 118
Query: 214 IQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG 273
++ + G+ Y H +VHRD+K EN+LLDA+ KIADFG++ + + + G
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRXSCG 177
Query: 274 TLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFTDVSSAVVRQNL 328
+ Y APEV+ G+ Y + D++S G+ L+ + C +P+ D F + +
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY--- 234
Query: 329 RPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
P+ S+ S+++ +P KR + ++
Sbjct: 235 ---TPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 109 QDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKI 166
+DVAVK+L D A D + FR+E L+HP + A T +
Sbjct: 55 RDVAVKVLRADLARD--------PSFYLRFRREAQNAAALNHPAIV----AVYDTGEAET 102
Query: 167 PSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSY 226
P+ LP +V+EY+ G TL+ I + + K I++ D + L++
Sbjct: 103 PA--------GPLP----YIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNF 148
Query: 227 LHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVL 283
H I+HRDVK N+++ A +K+ DFG+AR A + +T +G Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 284 DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPR--CCPSSLA 341
G + + DVYS G L+E+ + P+ S V+ VR++ P R + L
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 268
Query: 342 SIMRKCWDANPDKR 355
+++ K NP+ R
Sbjct: 269 AVVLKALAKNPENR 282
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 64
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + + T N +V E+L LKKF+ +
Sbjct: 65 HPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTG 103
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 104 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 163
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 164 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 327 NLRPD 331
PD
Sbjct: 224 LGTPD 228
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LKKF+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKKFMDASALTG 100
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 327 NLRPD 331
PD
Sbjct: 221 LGTPD 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 68/301 (22%)
Query: 94 ARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
ARG +G V++ VAVKI +D +E +E+ + H N+ +
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFP-LQDKQSWQSE---------REIFSTPGMKHENLLQ 73
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVV 213
FI A +NL++ ++ + G+L +L K + + +
Sbjct: 74 FIAAEKRGSNLEV----------------ELWLITAFHDKGSLTDYL---KGNIITWNEL 114
Query: 214 IQIALDLARGLSYLHSK-----------TIVHRDVKTENMLLDANRTLKIADFGVA-RVE 261
+A ++RGLSYLH +I HRD K++N+LL ++ T +ADFG+A R E
Sbjct: 115 CHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE 174
Query: 262 -AQNPRDMTGETGTLGYMAPEVLDGK-PYNR----KCDVYSFGICLWEIY----CCDMPY 311
+ P D G+ GT YMAPEVL+G + R + D+Y+ G+ LWE+ D P
Sbjct: 175 PGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPV 234
Query: 312 PDL------------SFTDVSSAVVRQNLRPDI-----PRCCPSSLASIMRKCWDANPDK 354
+ S ++ VV + +RP I + L + +CWD + +
Sbjct: 235 DEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEA 294
Query: 355 R 355
R
Sbjct: 295 R 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
L + +I + +A+G+ +L S+ +HRD+ N+LL +KI DFG+AR ++P
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 268 MTGETG--TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVV 324
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
++ R P + M CW P +RP E+V+ L
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
L + +I + +A+G+ +L S+ +HRD+ N+LL +KI DFG+AR ++P
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 268 MTGETG--TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVV 324
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
++ R P + M CW P +RP E+V+ L
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
L + +I + +A+G+ +L S+ +HRD+ N+LL +KI DFG+AR ++P
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 268 MTGETG--TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVV 324
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
++ R P + M CW P +RP E+V+ L
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
L + +I + +A+G+ +L S+ +HRD+ N+LL +KI DFG+AR ++P
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 268 MTGETG--TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVV 324
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLL 365
++ R P + M CW P +RP E+V+ L
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 78 EEWEIELAK---------LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTS 126
EE E+ LAK + + +GT+G V + G+ A+KIL ++ +V
Sbjct: 132 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAK 189
Query: 127 AEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCV 186
E A R V Q HP +T LK Q+ H+ L C
Sbjct: 190 DEVAHTLTENR----VLQNSRHPFLTA----------LKYSFQT-----HDRL-----CF 225
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVKTENMLLD 245
V+EY GG L F ++ + + ++ L YLHS K +V+RD+K EN++LD
Sbjct: 226 VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 283
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ +KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++E+
Sbjct: 284 KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Query: 306 CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
C +P+ + + ++ + +R PR S++ +P +R
Sbjct: 344 CGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 78 EEWEIELAK---------LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTS 126
EE E+ LAK + + +GT+G V + G+ A+KIL ++ +V
Sbjct: 135 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAK 192
Query: 127 AEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCV 186
E A R V Q HP +T LK Q+ H+ L C
Sbjct: 193 DEVAHTLTENR----VLQNSRHPFLTA----------LKYSFQT-----HDRL-----CF 228
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVKTENMLLD 245
V+EY GG L F ++ + + ++ L YLHS K +V+RD+K EN++LD
Sbjct: 229 VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 286
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ +KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++E+
Sbjct: 287 KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 306 CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
C +P+ + + ++ + +R PR S++ +P +R
Sbjct: 347 CGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 60
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LK F+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKDFMDASALTG 99
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K EN+L++ +K+ADFG+AR R
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 327 NLRPD 331
PD
Sbjct: 220 LGTPD 224
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 88 DIRHEIARGTYGTVYRGAYDGQDV--AVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+I E+ G +G VY+ V A K++D T +E + E+ +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TKSEEEL--EDYMVEIDILAS 90
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
DHPN+ K + A NL +++E+ GG + ++ +R
Sbjct: 91 CDHPNIVKLLDAFYYENNL--------------------WILIEFCAGGAVDAVMLELER 130
Query: 206 --KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ +VV + LD L+YLH I+HRD+K N+L + +K+ADFGV+ +
Sbjct: 131 PLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 264 NPRDMTGETGTLGYMAPEVL-----DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ GT +MAPEV+ +PY+ K DV+S GI L E+ + P+ +L+
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 319 VSSAVVRQNLRPDI--PRCCPSSLASIMRKCWDANPDKR 355
V + + P + P S+ ++KC + N D R
Sbjct: 248 VLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
E E KL + +GT+G V + G+ A+KIL ++ +V E A R
Sbjct: 9 EFEYLKL-----LGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAHTLTENR- 60
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 61 ---VLQNSRHPFLTA----------LKYSFQT-----HDRL-----CFVMEYANGGEL-- 95
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVKTENMLLDANRTLKIADFGV 257
F ++ + + ++ L YLHS K +V+RD+K EN++LD + +KI DFG+
Sbjct: 96 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFT 317
+ ++ M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 156 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 216 KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
PR T E E KL + +GT+G V + G+ A+KIL ++ +V E A
Sbjct: 5 PRVTMN-EFEYLKL-----LGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAH 56
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
R V Q HP +T LK Q+ H+ L C V+EY
Sbjct: 57 TLTENR----VLQNSRHPFLTA----------LKYSFQT-----HDRL-----CFVMEYA 92
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVKTENMLLDANRTL 250
GG L F ++ + + ++ L YLHS K +V+RD+K EN++LD + +
Sbjct: 93 NGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 150
Query: 251 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 310
KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++E+ C +P
Sbjct: 151 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
Query: 311 YPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ + + ++ + +R PR S++ +P +R
Sbjct: 211 FYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 88 DIRHEIARGTYGTVYRGAYDGQDV--AVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+I E+ G +G VY+ V A K++D T +E + E+ +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TKSEEEL--EDYMVEIDILAS 90
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
DHPN+ K + A NL +++E+ GG + ++ +R
Sbjct: 91 CDHPNIVKLLDAFYYENNL--------------------WILIEFCAGGAVDAVMLELER 130
Query: 206 --KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ +VV + LD L+YLH I+HRD+K N+L + +K+ADFGV+ +
Sbjct: 131 PLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 264 NPRDMTGETGTLGYMAPEVL-----DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+ GT +MAPEV+ +PY+ K DV+S GI L E+ + P+ +L+
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 319 VSSAVVRQNLRPDI--PRCCPSSLASIMRKCWDANPDKR 355
V + + P + P S+ ++KC + N D R
Sbjct: 248 VLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 44/285 (15%)
Query: 93 IARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP- 149
+ GTYG VY+G + GQ A+K++D VT E I+ QE+ + +K H
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD------VTGDEEEEIK----QEINMLKKYSHHR 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + GA + + Q +V+E+ G++ + K L
Sbjct: 82 NIATYYGAFIKKNPPGMDDQ--------------LWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + I ++ RGLS+LH ++HRD+K +N+LL N +K+ DFGV+ +
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187
Query: 270 GETGTLGYMAPEVL--DGKP---YNRKCDVYSFGICLWEIY-----CCDMPYPDLSFTDV 319
GT +MAPEV+ D P Y+ K D++S GI E+ CDM +P +
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALF-- 244
Query: 320 SSAVVRQNLRPDI-PRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
++ +N P + + S + C N +RP ++++K
Sbjct: 245 ---LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
E E KL + +GT+G V + G+ A+KIL ++ +V E A R
Sbjct: 10 EFEYLKL-----LGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAHTLTENR- 61
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
V Q HP +T LK Q+ H+ L C V+EY GG L
Sbjct: 62 ---VLQNSRHPFLTA----------LKYSFQT-----HDRL-----CFVMEYANGGEL-- 96
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVKTENMLLDANRTLKIADFGV 257
F ++ + + ++ L YLHS K +V+RD+K EN++LD + +KI DFG+
Sbjct: 97 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFT 317
+ ++ M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 157 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
Query: 318 DVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ ++ + +R PR S++ +P +R
Sbjct: 217 KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 50/282 (17%)
Query: 88 DIRHEIARGTYGTVYRGAYDGQDV--AVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+I E+ G +G VY+ V A K++D T +E + E+ +
Sbjct: 40 EIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TKSEEEL--EDYMVEIDILAS 90
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
DHPN+ K + A NL +++E+ GG + ++ +R
Sbjct: 91 CDHPNIVKLLDAFYYENNL--------------------WILIEFCAGGAVDAVMLELER 130
Query: 206 --KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ +VV + LD L+YLH I+HRD+K N+L + +K+ADFGV+ A+
Sbjct: 131 PLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AK 184
Query: 264 NPRDMTGE---TGTLGYMAPEVL-----DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLS 315
N R + GT +MAPEV+ +PY+ K DV+S GI L E+ + P+ +L+
Sbjct: 185 NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
Query: 316 FTDVSSAVVRQNLRPDI--PRCCPSSLASIMRKCWDANPDKR 355
V + + P + P S+ ++KC + N D R
Sbjct: 245 PMRVLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 92 EIARGTYGTVYRGA-YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
++ GTYG VY+ G+ VA+K + AE I ++ +E+++ ++L HPN
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIR-------LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ I + + S C +V LKK L NK
Sbjct: 81 IVSLI---------------------DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
++ I + L RG+++ H I+HRD+K +N+L++++ LK+ADFG+AR R T
Sbjct: 120 QIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 271 ETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
E TL Y AP+VL G K Y+ D++S G E+ +P ++ D
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 92 EIARGTYGTVYRGA-YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
++ GTYG VY+ G+ VA+K + AE I ++ +E+++ ++L HPN
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALK-------RIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ I + + S C +V LKK L NK
Sbjct: 81 IVSLI---------------------DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
++ I + L RG+++ H I+HRD+K +N+L++++ LK+ADFG+AR R T
Sbjct: 120 QIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 271 ETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
E TL Y AP+VL G K Y+ D++S G E+ +P ++ D
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LK F+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYL--------------------VFEFL-HQDLKTFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
+V+EY PGG L ++I R L+ + + + ++Y+HS+ HRD+K EN+L D
Sbjct: 85 MVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWE 303
LK+ DFG+ A+ + + G+L Y APE++ GK Y + DV+S GI L+
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYV 202
Query: 304 IYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ C +P+ D + + ++R + D+P+ S ++++ +P KR M ++
Sbjct: 203 LMCGFLPFDDDNVMALYKKIMRG--KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 62
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LK F+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYL--------------------VFEFL-SMDLKDFMDASALTG 101
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 327 NLRPD 331
PD
Sbjct: 222 LGTPD 226
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 43/291 (14%)
Query: 81 EIELAKLDIRHEIARGTYGTVYRGAY--DGQDV----AVKILDWAEDGMVTSAEAAAIRA 134
E EL K+ + + G +GTVY+G + DG++V A+K+L E+ TS +A
Sbjct: 16 ETELRKVKV---LGSGAFGTVYKGIWIPDGENVKIPVAIKVL--REN---TSPKA---NK 64
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
E V + P V++ +G + +T +V + +P G
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTST---------------------VQLVTQLMPYG 103
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L +R R +L + ++ + +A+G+SYL +VHRD+ N+L+ + +KI D
Sbjct: 104 CLLDH-VRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITD 162
Query: 255 FGVARVEAQNPRDMTGETGT--LGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PY 311
FG+AR+ + + + G + +MA E + + + + DV+S+G+ +WE+ PY
Sbjct: 163 FGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY 222
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ ++ + + P P C + IM KCW + + RP E+V
Sbjct: 223 DGIPAREIPDLLEKGERLPQ-PPICTIDVYMIMVKCWMIDSECRPRFRELV 272
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+I GTYG VY R G+ VA+K LD +G+ ++A IR E+++ ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IR-----EISLLKELN 63
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HPN+ K + L + V E+L LK F+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYL--------------------VFEFL-SMDLKDFMDASALTG 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ ++ L +GL++ HS ++HRD+K +N+L++ +K+ADFG+AR R
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
E TL Y APE+L G K Y+ D++S G E+ +P S D + R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 327 NLRPD 331
PD
Sbjct: 223 LGTPD 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + GQ+ AVK++ + T E S +EV + ++LDHPN
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHPN 110
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLA 209
+ K + + +V E GG L +I RK+ +
Sbjct: 111 IMKL---------------------YEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFS 147
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPR 266
+I + G++Y+H IVHRD+K EN+LL++ + ++I DFG++ + +
Sbjct: 148 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASK 206
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
M + GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V +
Sbjct: 207 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 265
Query: 327 NLRPDIP--RCCPSSLASIMRKCWDANPDKR 355
++P + S ++RK P R
Sbjct: 266 KYTFELPQWKKVSESAKDLIRKMLTYVPSMR 296
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + GQ+ AVK++ + T E S +EV + ++LDHPN
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHPN 111
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLA 209
+ K + + +V E GG L +I RK+ +
Sbjct: 112 IMKL---------------------YEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFS 148
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPR 266
+I + G++Y+H IVHRD+K EN+LL++ + ++I DFG++ + +
Sbjct: 149 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASK 207
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
M + GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V +
Sbjct: 208 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 266
Query: 327 NLRPDIP--RCCPSSLASIMRKCWDANPDKR 355
++P + S ++RK P R
Sbjct: 267 KYTFELPQWKKVSESAKDLIRKMLTYVPSMR 297
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 39/249 (15%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
++ G YG V + G + A+KI+ + + T++ + A+ EVAV ++LDHP
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKII--KKSSVTTTSNSGALL----DEVAVLKQLDHP 64
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKL 208
N+ K D N +V+E GG L + ++R K ++
Sbjct: 65 NIMKLY--------------EFFEDKRNYY------LVMEVYRGGELFDEIILRQKFSEV 104
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGV-ARVEAQN 264
V+++ L G +YLH IVHRD+K EN+LL++ + +KI DFG+ A E
Sbjct: 105 DAAVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 265 PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
M GT Y+APEVL K Y+ KCDV+S G+ L+ + C P+ + ++ V
Sbjct: 162 K--MKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE 218
Query: 325 RQNLRPDIP 333
+ D P
Sbjct: 219 KGKFSFDPP 227
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 57/292 (19%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G +G V R A D + A+K + E+ + T EV + L+H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST----------ILSEVXLLASLNHQY 63
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIR---NKRKK 207
V ++ A + N P + S + EY TL + N+++
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKS-------TLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA--------- 258
+++ QI LSY+HS+ I+HR++K N+ +D +R +KI DFG+A
Sbjct: 117 EYWRLFRQIL----EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 259 -RVEAQN----PRDMTGETGTLGYMAPEVLDGK-PYNRKCDVYSFGICLWE-IYCCDMPY 311
++++QN ++T GT Y+A EVLDG YN K D YS GI +E IY P+
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY----PF 228
Query: 312 PDLSFTDVSSAVVRQNLR-------PDIPRCCPSSLASIMRKCWDANPDKRP 356
T + + LR PD I+R D +P+KRP
Sbjct: 229 S----TGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + GQ+ AVK++ + T E S +EV + ++LDHPN
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHPN 87
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLA 209
+ K + + +V E GG L +I RK+ +
Sbjct: 88 IMKL---------------------YEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFS 124
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPR 266
+I + G++Y+H IVHRD+K EN+LL++ + ++I DFG++ + +
Sbjct: 125 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASK 183
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
M + GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V +
Sbjct: 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 327 NLRPDIP--RCCPSSLASIMRKCWDANPDKR 355
++P + S ++RK P R
Sbjct: 243 KYTFELPQWKKVSESAKDLIRKMLTYVPSMR 273
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 37/248 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
++ G YG V + G + A+KI+ + + T++ + A+ EVAV ++LDHP
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKII--KKSSVTTTSNSGALL----DEVAVLKQLDHP 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKL 208
N+ K D N +V+E GG L + ++R K ++
Sbjct: 82 NIMKLY--------------EFFEDKRNYY------LVMEVYRGGELFDEIILRQKFSEV 121
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNP 265
V+++ L G +YLH IVHRD+K EN+LL++ + +KI DFG++ +
Sbjct: 122 DAAVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVG 177
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
M GT Y+APEVL K Y+ KCDV+S G+ L+ + C P+ + ++ V +
Sbjct: 178 GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
Query: 326 QNLRPDIP 333
D P
Sbjct: 237 GKFSFDPP 244
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 36/225 (16%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
++ G YG V R + A+KI+ + + TS+ + + +EVAV + LDHP
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKII--RKTSVSTSSNSKLL-----EEVAVLKLLDHP 96
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ K D N C Y G + + R K ++
Sbjct: 97 NIMKLY--------------DFFEDKRNYYLVMEC-----YKGGELFDEIIHRMKFNEVD 137
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNPR 266
V+I+ L G++YLH IVHRD+K EN+LL++ +KI DFG++ V +N +
Sbjct: 138 AAVIIKQVLS---GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-FENQK 193
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
M GT Y+APEVL K Y+ KCDV+S G+ L+ + P+
Sbjct: 194 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 87 LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
DI + +G +G VY R + +A+K+L + E + R+E+ +
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQS 69
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRN 203
L HPN+ + +N R +++E+ P G L K L
Sbjct: 70 HLRHPNILRM---------------------YNYFHDRKRIYLMLEFAPRGELYKEL--Q 106
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
K + + +LA L Y H + ++HRD+K EN+L+ LKIADFG + V A
Sbjct: 107 KHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAP 165
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
+ R GTL Y+ PE+++GK ++ K D++ G+ +E P+ S T+ +
Sbjct: 166 SLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
Query: 324 VRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
V +L+ P ++ K +P +R
Sbjct: 225 VNVDLK--FPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 48/276 (17%)
Query: 96 GTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
GT+G V G + G VAVKIL+ + + + ++E+ + HP++ K
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQK------IRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR-KKLAFKV 212
T+ +V+EY+ GG L ++ ++ R +++ +
Sbjct: 76 LYQVISTPTDF--------------------FMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 213 VIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--EAQNPRDMTG 270
+ Q L + Y H +VHRD+K EN+LLDA+ KIADFG++ + + + RD
Sbjct: 116 LFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD--- 169
Query: 271 ETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFTDVSSAVVR 325
G+ Y APEV+ G+ Y + D++S G+ L+ + C +P+ D F + V
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY 229
Query: 326 QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
IP S+A+++ +P KR + ++
Sbjct: 230 ------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + GQ+ AVK++ + T E S +EV + ++LDHPN
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHPN 93
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLA 209
+ K + + +V E GG L +I RK+ +
Sbjct: 94 IMKL---------------------YEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFS 130
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPR 266
+I + G++Y+H IVHRD+K EN+LL++ + ++I DFG++ + +
Sbjct: 131 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASK 189
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
M + GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V +
Sbjct: 190 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 248
Query: 327 NLRPDIP--RCCPSSLASIMRKCWDANPDKR 355
++P + S ++RK P R
Sbjct: 249 KYTFELPQWKKVSESAKDLIRKMLTYVPSMR 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 87 LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
DI + +G +G VY R + +A+K+L + E + R+E+ +
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQS 70
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRN 203
L HPN+ + +N R +++E+ P G L K L
Sbjct: 71 HLRHPNILRM---------------------YNYFHDRKRIYLMLEFAPRGELYKEL--Q 107
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
K + + +LA L Y H + ++HRD+K EN+L+ LKIADFG + V A
Sbjct: 108 KHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAP 166
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
+ R GTL Y+ PE+++GK ++ K D++ G+ +E P+ S T+ +
Sbjct: 167 SLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
Query: 324 VRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
V +L+ P ++ K +P +R
Sbjct: 226 VNVDLK--FPPFLSDGSKDLISKLLRYHPPQR 255
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 129/300 (43%), Gaps = 52/300 (17%)
Query: 75 RKTEEWEIELAKLD------IRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTS 126
RK+ E+E LD I E+ G +G VY+ G A K+++ T
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-------TK 55
Query: 127 AEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCV 186
+E + E+ + DHP + K +GA L +
Sbjct: 56 SEEEL--EDYIVEIEILATCDHPYIVKLLGAYYHDGKL--------------------WI 93
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
++E+ PGG + ++ R ++ + + + L++LHSK I+HRD+K N+L+
Sbjct: 94 MIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 152
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV-----LDGKPYNRKCDVYSFGICL 301
+++ADFGV+ + + GT +MAPEV + PY+ K D++S GI L
Sbjct: 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 302 WEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI-----MRKCWDANPDKRP 356
E+ + P+ +L+ V + + D P S S+ ++ D NP+ RP
Sbjct: 213 IEMAQIEPPHHELNPMRVLLKIAKS----DPPTLLTPSKWSVEFRDFLKIALDKNPETRP 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 87 LDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
DI + +G +G VY R + +A+K+L + E + R+E+ +
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQS 69
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRN 203
L HPN+ + +N R +++E+ P G L K L
Sbjct: 70 HLRHPNILRM---------------------YNYFHDRKRIYLMLEFAPRGELYKEL--Q 106
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
K + + +LA L Y H + ++HRD+K EN+L+ LKIADFG + V A
Sbjct: 107 KHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAP 165
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
+ R GTL Y+ PE+++GK ++ K D++ G+ +E P+ S T+ +
Sbjct: 166 SLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
Query: 324 VRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
V +L+ P ++ K +P +R
Sbjct: 225 VNVDLK--FPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 44/274 (16%)
Query: 96 GTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
GT+G V G + G VAVKIL+ + + + ++E+ + HP++ K
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQK------IRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR-KKLAFKV 212
T+ +V+EY+ GG L ++ ++ R +++ +
Sbjct: 76 LYQVISTPTDF--------------------FMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 213 VIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET 272
+ Q L + Y H +VHRD+K EN+LLDA+ KIADFG++ + + T
Sbjct: 116 LFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SC 171
Query: 273 GTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPD----LSFTDVSSAVVRQN 327
G+ Y APEV+ G+ Y + D++S G+ L+ + C +P+ D F + V
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-- 229
Query: 328 LRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
IP S+A+++ +P KR + ++
Sbjct: 230 ----IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 29/228 (12%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA SD S + +E+
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGA-------------FYSDGEIS-------ICMEH 88
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 89 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 146
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q +M E GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 147 IKLCDFGVS---GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRCCPS-SLASIMRKCWDANPDKR 355
P P ++ ++ +V + P +P S + KC NP +R
Sbjct: 204 YPRPPMAIFELLDYIVNEP-PPKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML 243
+++++L GG L F +K + V +LA GL +LHS I++RD+K EN+L
Sbjct: 105 LYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENIL 162
Query: 244 LDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
LD +K+ DFG+++ + + GT+ YMAPEV++ + ++ D +S+G+ ++E
Sbjct: 163 LDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFE 222
Query: 304 IYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +P+ + + +++ L +P+ + S++R + NP R
Sbjct: 223 MLTGSLPFQGKDRKETMTLILKAKL--GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 46/281 (16%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+I E+ G +G VY+ G A K+++ T +E + E+ +
Sbjct: 14 EIVGELGDGAFGKVYKAKNKETGALAAAKVIE-------TKSEEEL--EDYIVEIEILAT 64
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
DHP + K +GA L +++E+ PGG + ++ R
Sbjct: 65 CDHPYIVKLLGAYYHDGKL--------------------WIMIEFCPGGAVDAIMLELDR 104
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
++ + + + L++LHSK I+HRD+K N+L+ +++ADFGV+ +
Sbjct: 105 GLTEPQIQV-VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 163
Query: 266 RDMTGETGTLGYMAPEV-----LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
+ GT +MAPEV + PY+ K D++S GI L E+ + P+ +L+ V
Sbjct: 164 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 223
Query: 321 SAVVRQNLRPDIPRCCPSSLASI-----MRKCWDANPDKRP 356
+ + D P S S+ ++ D NP+ RP
Sbjct: 224 LKIAKS----DPPTLLTPSKWSVEFRDFLKIALDKNPETRP 260
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 63/312 (20%)
Query: 82 IELAKLDIRHEIARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSA----------- 127
++L + ++ EI +G+YG V + AY+ D A+K+L ++ ++ A
Sbjct: 10 VQLNQYTLKDEIGKGSYGVV-KLAYNENDNTYYAMKVL--SKKKLIRQAGFPRRPPPRGT 66
Query: 128 ---EAAAIRA-----SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSL 179
I+ QE+A+ +KLDHPNV K + L P++
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV------LDDPNEDH-------- 112
Query: 180 PSRACCVVVEYLPGG------TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIV 233
+V E + G TLK + + + F+ DL +G+ YLH + I+
Sbjct: 113 ----LYMVFELVNQGPVMEVPTLKP--LSEDQARFYFQ-------DLIKGIEYLHYQKII 159
Query: 234 HRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDG--KPYNRK 291
HRD+K N+L+ + +KIADFGV+ + ++ GT +MAPE L K ++ K
Sbjct: 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGK 219
Query: 292 C-DVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR-PDIPRCCPSSLASIMRKCWD 349
DV++ G+ L+ P+ D + S + Q L PD P L ++ + D
Sbjct: 220 ALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIA-EDLKDLITRMLD 278
Query: 350 ANPDKRPVMDEV 361
NP+ R V+ E+
Sbjct: 279 KNPESRIVVPEI 290
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 51/275 (18%)
Query: 96 GTYGTVYRGAYDGQDV--AVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTK 153
G +G VY+ V A K++D T +E + E+ + DHPN+ K
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVID-------TKSEEEL--EDYMVEIDILASCDHPNIVK 71
Query: 154 FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKLAFK 211
+ A NL I ++E+ GG + ++ +R + +
Sbjct: 72 LLDAFYYENNLWI--------------------LIEFCAGGAVDAVMLELERPLTESQIQ 111
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE 271
VV + LD L+YLH I+HRD+K N+L + +K+ADFGV+ A+N R
Sbjct: 112 VVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQR 165
Query: 272 ----TGTLGYMAPEVL-----DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
GT +MAPEV+ +PY+ K DV+S GI L E+ + P+ +L+ V
Sbjct: 166 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
Query: 323 VVRQNLRPDI--PRCCPSSLASIMRKCWDANPDKR 355
+ + P + P S+ ++KC + N D R
Sbjct: 226 IAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 40/234 (17%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
S E+AV K+ HPN+ A D + S ++++ +
Sbjct: 60 EGSMENEIAVLHKIKHPNIV------------------ALDDIYES--GGHLYLIMQLVS 99
Query: 193 GGTL------KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML--- 243
GG L K F +L F+V+ + YLH IVHRD+K EN+L
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 244 LDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWE 303
LD + + I+DFG++++E ++ GT GY+APEVL KPY++ D +S G+ +
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSV-LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 304 IYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKR 355
+ C P+ D + + +++ D P S +R + +P+KR
Sbjct: 211 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
S E+AV K+ HPN+ A D + S ++++ +
Sbjct: 60 EGSMENEIAVLHKIKHPNIV------------------ALDDIYES--GGHLYLIMQLVS 99
Query: 193 GGTL------KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML--- 243
GG L K F +L F+V+ + YLH IVHRD+K EN+L
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 244 LDANRTLKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LD + + I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ +
Sbjct: 152 LDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKRPVMDE 360
+ C P+ D + + +++ D P S +R + +P+KR ++
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 361 VVK 363
++
Sbjct: 270 ALQ 272
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
S E+AV K+ HPN+ A D + S ++++ +
Sbjct: 60 EGSMENEIAVLHKIKHPNIV------------------ALDDIYES--GGHLYLIMQLVS 99
Query: 193 GGTL------KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML--- 243
GG L K F +L F+V+ + YLH IVHRD+K EN+L
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 244 LDANRTLKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LD + + I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ +
Sbjct: 152 LDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKRPVMDE 360
+ C P+ D + + +++ D P S +R + +P+KR ++
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 361 VVK 363
++
Sbjct: 270 ALQ 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
+ I + G++G V + AY GQ VA+KI++ + ++ +E
Sbjct: 12 HIGNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINK------KVLAKSDMQGRIERE 64
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
++ + L HP++ K ++ + S+ ++V G L +
Sbjct: 65 ISYLRLLRHPHIIKL---------------------YDVIKSKDEIIMVIEYAGNELFDY 103
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
++ +R K++ + + + + Y H IVHRD+K EN+LLD + +KIADFG++
Sbjct: 104 IV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 161
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPDLS--- 315
+ + + G+ Y APEV+ GK Y + DV+S G+ L+ + C +P+ D S
Sbjct: 162 I-MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 220
Query: 316 -FTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
F ++S+ V +P+ A ++++ NP R + E+++
Sbjct: 221 LFKNISNGVY------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
S E+AV K+ HPN+ A D + S ++++ +
Sbjct: 60 EGSMENEIAVLHKIKHPNIV------------------ALDDIYES--GGHLYLIMQLVS 99
Query: 193 GGTL------KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML--- 243
GG L K F +L F+V+ + YLH IVHRD+K EN+L
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 244 LDANRTLKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LD + + I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ +
Sbjct: 152 LDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKRPVMDE 360
+ C P+ D + + +++ D P S +R + +P+KR ++
Sbjct: 210 ILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
Query: 361 VVK 363
++
Sbjct: 270 ALQ 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIAL-DLARGLSYLHSKTIVHRDVKTENM 242
+++++L GG L R ++ + + ++ L +LA L +LHS I++RD+K EN+
Sbjct: 101 LYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI 157
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LLD +K+ DFG+++ + + GT+ YMAPEV++ + + + D +SFG+ ++
Sbjct: 158 LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
E+ +P+ + + +++ L +P+ S++R + NP R
Sbjct: 218 EMLTGTLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
+ I + G++G V + AY GQ VA+KI++ + ++ +E
Sbjct: 11 HIGNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINK------KVLAKSDMQGRIERE 63
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
++ + L HP++ K ++ + S+ ++V G L +
Sbjct: 64 ISYLRLLRHPHIIKL---------------------YDVIKSKDEIIMVIEYAGNELFDY 102
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
++ +R K++ + + + + Y H IVHRD+K EN+LLD + +KIADFG++
Sbjct: 103 IV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 160
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPDLS--- 315
+ + + G+ Y APEV+ GK Y + DV+S G+ L+ + C +P+ D S
Sbjct: 161 I-MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219
Query: 316 -FTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
F ++S+ V +P+ A ++++ NP R + E+++
Sbjct: 220 LFKNISNGVY------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIAL-DLARGLSYLHSKTIVHRDVKTENM 242
+++++L GG L R ++ + + ++ L +LA L +LHS I++RD+K EN+
Sbjct: 102 LYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI 158
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LLD +K+ DFG+++ + + GT+ YMAPEV++ + + + D +SFG+ ++
Sbjct: 159 LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 218
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
E+ +P+ + + +++ L +P+ S++R + NP R
Sbjct: 219 EMLTGTLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIAL-DLARGLSYLHSKTIVHRDVKTENM 242
+++++L GG L R ++ + + ++ L +LA L +LHS I++RD+K EN+
Sbjct: 101 LYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI 157
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LLD +K+ DFG+++ + + GT+ YMAPEV++ + + + D +SFG+ ++
Sbjct: 158 LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
E+ +P+ + + +++ L +P+ S++R + NP R
Sbjct: 218 EMLTGTLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
+ I + G++G V + AY GQ VA+KI++ + ++ +E
Sbjct: 2 HIGNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINK------KVLAKSDMQGRIERE 54
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
++ + L HP++ K ++ + S+ ++V G L +
Sbjct: 55 ISYLRLLRHPHIIKL---------------------YDVIKSKDEIIMVIEYAGNELFDY 93
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
++ +R K++ + + + + Y H IVHRD+K EN+LLD + +KIADFG++
Sbjct: 94 IV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 151
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPDLS--- 315
+ + + G+ Y APEV+ GK Y + DV+S G+ L+ + C +P+ D S
Sbjct: 152 I-MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 210
Query: 316 -FTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
F ++S+ V +P+ A ++++ NP R + E+++
Sbjct: 211 LFKNISNGVY------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQE 139
+ I + G++G V + AY GQ VA+KI++ + ++ +E
Sbjct: 6 HIGNYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINK------KVLAKSDMQGRIERE 58
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
++ + L HP++ K ++ + S+ ++V G L +
Sbjct: 59 ISYLRLLRHPHIIKL---------------------YDVIKSKDEIIMVIEYAGNELFDY 97
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
++ +R K++ + + + + Y H IVHRD+K EN+LLD + +KIADFG++
Sbjct: 98 IV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 155
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPYPDLS--- 315
+ + + G+ Y APEV+ GK Y + DV+S G+ L+ + C +P+ D S
Sbjct: 156 I-MTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 214
Query: 316 -FTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
F ++S+ V +P+ A ++++ NP R + E+++
Sbjct: 215 LFKNISNGVY------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 39/271 (14%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ +G++G V + GQ+ AVK++ + T E S +EV + ++LDHPN
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHPN 87
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLA 209
+ K + + +V E GG L +I RK+ +
Sbjct: 88 IXKL---------------------YEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFS 124
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPR 266
+I + G++Y H IVHRD+K EN+LL++ + ++I DFG++ + +
Sbjct: 125 EVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASK 183
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
+ GT Y+APEVL G Y+ KCDV+S G+ L+ + P+ + D+ V +
Sbjct: 184 KXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 327 NLRPDIP--RCCPSSLASIMRKCWDANPDKR 355
++P + S ++RK P R
Sbjct: 243 KYTFELPQWKKVSESAKDLIRKXLTYVPSXR 273
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD-- 147
EI G YGTVY R + G VA+K + + S +EVA+ ++L+
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPN----GGGGGGGLPISTVREVALLRRLEAF 71
Query: 148 -HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HPNV + + ATS + + +V E++ L+ +L +
Sbjct: 72 EHPNVVRLMDVC------------ATSRTDREI---KVTLVFEHV-DQDLRTYLDKAPPP 115
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
L + + + RGL +LH+ IVHRD+K EN+L+ + T+K+ADFG+AR+ +
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-M 174
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+T TL Y APEVL Y D++S G E++
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + R ++KL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K+ D+G+ + E P D T GT Y+APE+L G+ Y D ++ G+ ++E+
Sbjct: 188 SEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 305 YCCDMPY--------PDLSFTD-VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ PD + D + ++ + +R IPR AS+++ + +P +R
Sbjct: 247 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 304
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + R ++KL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 98 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K+ D+G+ + E P D T GT Y+APE+L G+ Y D ++ G+ ++E+
Sbjct: 156 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 305 YCCDMPY--------PDLSFTD-VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ PD + D + ++ + +R IPR AS+++ + +P +R
Sbjct: 215 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSMSVKAASVLKSFLNKDPKER 272
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + + R K V A ++A GL +L SK I++RD+K +N++LD
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ +KIADFG+ + + GT Y+APE++ +PY + D ++FG+ L+E+
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 306 CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ ++ +++ N+ P+ +I + +P KR
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
E+++ + LDHPN+ K + +V E+ GG L
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFE--------------------DKKYFYLVTEFYEGGELF 134
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTL---KIAD 254
+ +I R K I + G+ YLH IVHRD+K EN+LL+ +L KI D
Sbjct: 135 EQIIN--RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192
Query: 255 FGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
FG++ +++ + + GT Y+APEVL K YN KCDV+S G+ ++ + C P+
Sbjct: 193 FGLSSFFSKDYK-LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250
Query: 315 SFTDVSSAV 323
+ D+ V
Sbjct: 251 NDQDIIKKV 259
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + + R K V A ++A GL +L SK I++RD+K +N++LD
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ +KIADFG+ + + GT Y+APE++ +PY + D ++FG+ L+E+
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 306 CCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ ++ +++ N+ P+ +I + +P KR
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + R ++KL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 83 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K+ D+G+ + E P D T GT Y+APE+L G+ Y D ++ G+ ++E+
Sbjct: 141 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 305 YCCDMPY--------PDLSFTD-VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ PD + D + ++ + +R IPR AS+++ + +P +R
Sbjct: 200 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 93 IARGTYGTVYRGAY-DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
+ RG +G VY+G DG VAVK L F+ EV + H N+
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRL--------KEERXQGGELQFQTEVEMISMAVHRNL 97
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK--LA 209
+ G M T +V Y+ G++ L + L
Sbjct: 98 LRLRGFCMTPTE--------------------RLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 210 FKVVIQIALDLARGLSYLHSK---TIVHRDVKTENMLLDANRTLKIADFGVARV-EAQNP 265
+ +IAL ARGL+YLH I+HRDVK N+LLD + DFG+A++ + ++
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY--------PDLSFT 317
GT+G++APE L + K DV+ +G+ L E+ + D+
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 318 DVSSAVVRQ---------NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
D ++++ +L+ + L + C ++P +RP M EVV++LE
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDW--AEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
EI G YGTVY R + G VA+K + E+G+ S +EVA+ ++L+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV---------REVALLRRLE 61
Query: 148 ---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
HPNV + + ATS + + +V E++ L+ +L +
Sbjct: 62 AFEHPNVVRLMDVC------------ATSRTDREI---KVTLVFEHV-DQDLRTYLDKAP 105
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
L + + + RGL +LH+ IVHRD+K EN+L+ + T+K+ADFG+AR+ +
Sbjct: 106 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 265 PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ TL Y APEVL Y D++S G E++
Sbjct: 166 -MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
V+EY+ GG L + R ++KL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 87 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 246 ANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K+ D+G+ + E P D T GT Y+APE+L G+ Y D ++ G+ ++E+
Sbjct: 145 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 305 YCCDMPY--------PDLSFTD-VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ PD + D + ++ + +R IPR AS+++ + +P +R
Sbjct: 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 38/235 (16%)
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
E+ V + LDHPN+ K D HN +V+E GG L +
Sbjct: 70 EIEVLKSLDHPNIIKIF--------------EVFEDYHN------MYIVMETCEGGELLE 109
Query: 199 FLI--RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD---ANRTLKIA 253
++ + + K L+ V ++ + L+Y HS+ +VH+D+K EN+L + +KI
Sbjct: 110 RIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII 169
Query: 254 DFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
DFG+A + ++ T GT YMAPEV + KCD++S G+ ++ + +P+
Sbjct: 170 DFGLAEL-FKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227
Query: 314 LSFTDVSSAVVRQ------NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
S +V + RP P+ ++++ +P++RP +V+
Sbjct: 228 TSLEEVQQKATYKEPNYAVECRPLTPQAV-----DLLKQMLTKDPERRPSAAQVL 277
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 45/281 (16%)
Query: 91 HEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I +G GTVY GQ+VA++ ++ + + E+ V ++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---------KELIINEILVMRENKN 76
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ DS+ L VV+EYL GG+L + +
Sbjct: 77 PNIVNYL------------------DSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV-ARVEAQNPRD 267
V + L + L +LHS ++HRD+K++N+LL + ++K+ DFG A++ + +
Sbjct: 117 QIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 268 MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA-VVRQ 326
T GT +MAPEV+ K Y K D++S GI E+ + PY L+ + + ++
Sbjct: 174 ST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIAT 230
Query: 327 NLRPDIPRCCPSSLASIMR----KCWDANPDKRPVMDEVVK 363
N P++ P L++I R +C D + +KR E+++
Sbjct: 231 NGTPELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDW--AEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
EI G YGTVY R + G VA+K + E+G+ S +EVA+ ++L+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV---------REVALLRRLE 61
Query: 148 ---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
HPNV + + ATS + + +V E++ L+ +L +
Sbjct: 62 AFEHPNVVRLMDVC------------ATSRTDREI---KVTLVFEHV-DQDLRTYLDKAP 105
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
L + + + RGL +LH+ IVHRD+K EN+L+ + T+K+ADFG+AR+ +
Sbjct: 106 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 265 PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ TL Y APEVL Y D++S G E++
Sbjct: 166 -MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDW--AEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
EI G YGTVY R + G VA+K + E+G+ S +EVA+ ++L+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV---------REVALLRRLE 61
Query: 148 ---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
HPNV + + ATS + + +V E++ L+ +L +
Sbjct: 62 AFEHPNVVRLMDVC------------ATSRTDREI---KVTLVFEHV-DQDLRTYLDKAP 105
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
L + + + RGL +LH+ IVHRD+K EN+L+ + T+K+ADFG+AR+ +
Sbjct: 106 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 265 PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+ TL Y APEVL Y D++S G E++
Sbjct: 166 -MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 91 HEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I +G GTVY GQ+VA++ ++ + + E+ V ++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---------KELIINEILVMRENKN 76
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ DS+ L VV+EYL GG+L + +
Sbjct: 77 PNIVNYL------------------DSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
V + L + L +LHS ++HRD+K++N+LL + ++K+ DFG
Sbjct: 117 QIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA-VVRQN 327
+ GT +MAPEV+ K Y K D++S GI E+ + PY L+ + + ++ N
Sbjct: 174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATN 231
Query: 328 LRPDIPRCCPSSLASIMR----KCWDANPDKRPVMDEVVK 363
P++ P L++I R +C D + +KR E+++
Sbjct: 232 GTPELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 34/243 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIRASF 136
WE+ +L + G YG+V AYD Q VAVK L ++ + R ++
Sbjct: 24 WEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHA------RRTY 75
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R E+ + + L H NV +G ++ P+ S S +V L G L
Sbjct: 76 R-ELRLLKHLKHENV-------IGLLDVFTPATSIEDFSE--------VYLVTTLMGADL 119
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ K + L+ + V + L RGL Y+HS I+HRD+K N+ ++ + L+I DFG
Sbjct: 120 NNIV---KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLS 315
+AR Q +MTG T Y APE+ L+ YN+ D++S G + E+ +P
Sbjct: 177 LAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
Query: 316 FTD 318
+ D
Sbjct: 234 YID 236
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 52/299 (17%)
Query: 93 IARGTYGTVYRGAY-DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNV 151
+ RG +G VY+G DG VAVK L F+ EV + H N+
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRL--------KEERTQGGELQFQTEVEMISMAVHRNL 89
Query: 152 TKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK--LA 209
+ G M T +V Y+ G++ L + L
Sbjct: 90 LRLRGFCMTPTE--------------------RLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 210 FKVVIQIALDLARGLSYLHSK---TIVHRDVKTENMLLDANRTLKIADFGVARV-EAQNP 265
+ +IAL ARGL+YLH I+HRDVK N+LLD + DFG+A++ + ++
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY--------PDLSFT 317
G +G++APE L + K DV+ +G+ L E+ + D+
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 318 DVSSAVVRQ---------NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEA 367
D ++++ +L+ + L + C ++P +RP M EVV++LE
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 91 HEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I +G GTVY GQ+VA++ ++ + + E+ V ++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---------KELIINEILVMRENKN 77
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ DS+ L VV+EYL GG+L + +
Sbjct: 78 PNIVNYL------------------DSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEG 117
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
V + L + L +LHS ++HRD+K++N+LL + ++K+ DFG
Sbjct: 118 QIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA-VVRQN 327
+ GT +MAPEV+ K Y K D++S GI E+ + PY L+ + + ++ N
Sbjct: 175 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATN 232
Query: 328 LRPDIPRCCPSSLASIMR----KCWDANPDKRPVMDEVVK 363
P++ P L++I R +C + + +KR E+++
Sbjct: 233 GTPELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 55/286 (19%)
Query: 89 IRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
IR + G++G V + Q VA+K + + + + +E++ + L
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISR------QLLKKSDMHMRVEREISYLKLL 66
Query: 147 DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRK 206
HP++ K T++ +V+EY GG L +++ KR
Sbjct: 67 RHPHIIKLYDVITTPTDI--------------------VMVIEY-AGGELFDYIVEKKRM 105
Query: 207 -----KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVE 261
+ F+ +I + Y H IVHRD+K EN+LLD N +KIADFG++ +
Sbjct: 106 TEDEGRRFFQQIIC-------AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI- 157
Query: 262 AQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPY-----PDLS 315
+ + G+ Y APEV++GK Y + DV+S GI L+ + +P+ P+L
Sbjct: 158 MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL- 216
Query: 316 FTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
F V+S V + PD P + S++R+ A+P +R + E+
Sbjct: 217 FKKVNSCVY---VMPDF--LSPGA-QSLIRRMIVADPMQRITIQEI 256
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 92 EIARGTYGTVYRGAYD-GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+I GTYG VY+ + G+ A+K + E I ++ +E+++ ++L H N
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK-------KIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K L + + D L C +E + T K FL
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV---TAKSFL---------- 106
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
L L G++Y H + ++HRD+K +N+L++ LKIADFG+AR R T
Sbjct: 107 -------LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 271 ETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
E TL Y AP+VL G K Y+ D++S G E+ +P +S D + R
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 92 EIARGTYGTVYRGAYD-GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+I GTYG VY+ + G+ A+K + E I ++ +E+++ ++L H N
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK-------KIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K L + + D L C +E + T K FL
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV---TAKSFL---------- 106
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
L L G++Y H + ++HRD+K +N+L++ LKIADFG+AR R T
Sbjct: 107 -------LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 271 ETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
E TL Y AP+VL G K Y+ D++S G E+ +P +S D + R
Sbjct: 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 43/309 (13%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D++ E+ +G + V R + G + A KI++ T +A +E + +K
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 84
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRN 203
L HPN+ + H+S+ + +V + + GG L + + R
Sbjct: 85 LQHPNIVRL---------------------HDSIQEESFHYLVFDLVTGGELFEDIVARE 123
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARV 260
+ IQ L+ ++Y HS IVHR++K EN+LL + +K+ADFG+A +
Sbjct: 124 FYSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-I 179
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
E + G GT GY++PEVL PY++ D+++ G+ L+ + P+ D +
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Query: 321 SAV---VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMI 377
+ + P+ P + S++ NP KR D+ +K+ N + I
Sbjct: 240 AQIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKVPWICNRERVASAI 298
Query: 378 PEDQAHGCL 386
CL
Sbjct: 299 HRQDTVDCL 307
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 92 EIARGTYGTVYRGAYD-GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+I GTYG VY+ + G+ A+K + E I ++ +E+++ ++L H N
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALK-------KIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ K L + + D L C +E + T K FL
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV---TAKSFL---------- 106
Query: 211 KVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG 270
L L G++Y H + ++HRD+K +N+L++ LKIADFG+AR R T
Sbjct: 107 -------LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 271 ETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
E TL Y AP+VL G K Y+ D++S G E+ +P +S D + R
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 43/309 (13%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D++ E+ +G + V R + G + A KI++ T +A +E + +K
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRN 203
L HPN+ + H+S+ + +V + + GG L + + R
Sbjct: 62 LQHPNIVRL---------------------HDSIQEESFHYLVFDLVTGGELFEDIVARE 100
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR---TLKIADFGVARV 260
+ IQ L+ ++Y HS IVHR++K EN+LL + +K+ADFG+A +
Sbjct: 101 FYSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-I 156
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
E + G GT GY++PEVL PY++ D+++ G+ L+ + P+ D +
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216
Query: 321 SAV---VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMI 377
+ + P+ P + S++ NP KR D+ +K+ N + I
Sbjct: 217 AQIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKVPWICNRERVASAI 275
Query: 378 PEDQAHGCL 386
CL
Sbjct: 276 HRQDXVDCL 284
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + R LSYLH++ ++HRD+K++++LL
Sbjct: 119 VVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
++ +K++DFG A+V + P+ GT +MAPEV+ PY + D++S GI + E+
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKR-KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 305 YCCDMPY 311
+ PY
Sbjct: 235 IDGEPPY 241
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 91 HEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I +G GTVY GQ+VA++ ++ + + E+ V ++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---------KELIINEILVMRENKN 76
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ DS+ L VV+EYL GG+L + +
Sbjct: 77 PNIVNYL------------------DSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
V + L + L +LHS ++HRD+K++N+LL + ++K+ DFG
Sbjct: 117 QIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 269 TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA-VVRQN 327
+ GT +MAPEV+ K Y K D++S GI E+ + PY L+ + + ++ N
Sbjct: 174 SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATN 231
Query: 328 LRPDIPRCCPSSLASIMR----KCWDANPDKRPVMDEVVK 363
P++ P L++I R +C + + +KR E+++
Sbjct: 232 GTPELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 34/243 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIRASF 136
WE+ +L + G YG+V AYD Q VAVK L ++ + R ++
Sbjct: 24 WEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHA------RRTY 75
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R E+ + + L H NV +G ++ P+ S S +V L G L
Sbjct: 76 R-ELRLLKHLKHENV-------IGLLDVFTPATSIEDFSE--------VYLVTTLMGADL 119
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ K + L+ + V + L RGL Y+HS I+HRD+K N+ ++ + L+I DFG
Sbjct: 120 NNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLS 315
+AR Q +MTG T Y APE+ L+ YN+ D++S G + E+ +P
Sbjct: 177 LAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
Query: 316 FTD 318
+ D
Sbjct: 234 YID 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 32/237 (13%)
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
+S E+AV +K+ H N+ A D + S P+ +V++ + G
Sbjct: 65 SSIENEIAVLRKIKHENIV------------------ALEDIYES-PNH-LYLVMQLVSG 104
Query: 194 GTLKKFLIRN--KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL---DANR 248
G L ++ +K A ++ Q+ LD + YLH IVHRD+K EN+L D
Sbjct: 105 GELFDRIVEKGFYTEKDASTLIRQV-LD---AVYYLHRMGIVHRDLKPENLLYYSQDEES 160
Query: 249 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+ I+DFG++++E + M+ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 161 KIMISDFGLSKMEGKGDV-MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPRC--CPSSLASIMRKCWDANPDKRPVMDEVVK 363
P+ D + + + +++ D P S +R + +P+KR ++ +
Sbjct: 220 PPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 45/281 (16%)
Query: 91 HEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDH 148
+I +G GTVY GQ+VA++ ++ + + E+ V ++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---------KELIINEILVMRENKN 77
Query: 149 PNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
PN+ ++ DS+ L VV+EYL GG+L + +
Sbjct: 78 PNIVNYL------------------DSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEG 117
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV-ARVEAQNPRD 267
V + L + L +LHS ++HR++K++N+LL + ++K+ DFG A++ + +
Sbjct: 118 QIAAVCRECL---QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 268 MTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA-VVRQ 326
T GT +MAPEV+ K Y K D++S GI E+ + PY L+ + + ++
Sbjct: 175 ST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIAT 231
Query: 327 NLRPDIPRCCPSSLASIMR----KCWDANPDKRPVMDEVVK 363
N P++ P L++I R +C + + +KR E+++
Sbjct: 232 NGTPELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ RG +G V+ + D + A+K + + + E A R +EV KL+HP
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIR------LPNRELA--REKVMREVKALAKLEHPG 64
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ ++ A + ++ T S P + ++ LK ++ N R +
Sbjct: 65 IVRYFNAWL--------EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEE 114
Query: 211 K---VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
+ V + I L +A + +LHSK ++HRD+K N+ + +K+ DFG+ Q+ +
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 268 M------------TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
TG+ GT YM+PE + G Y+ K D++S G+ L+E+
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
V+EY+ GG L + + K + A +++ GL +LH + I++RD+K +N++LD+
Sbjct: 98 VMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDS 155
Query: 247 NRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
+KIADFG+ + + GT Y+APE++ +PY + D +++G+ L+E+
Sbjct: 156 EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ ++ +++ N+ P+ SI + +P KR
Sbjct: 216 GQPPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 43/234 (18%)
Query: 87 LDIRHEIARGTYGTVYRGAYDG--QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
++ E+ RG VYR G + A+K+L D + R E+ V
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV-----------RTEIGVLL 103
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN- 203
+L HPN+ K LK ++ T S +V+E + GG L ++
Sbjct: 104 RLSHPNIIK----------LKEIFETPTEIS----------LVLELVTGGELFDRIVEKG 143
Query: 204 -KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVAR 259
++ A V QI ++YLH IVHRD+K EN+L + LKIADFG+++
Sbjct: 144 YYSERDAADAVKQIL----EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD 313
+ ++ M GT GY APE+L G Y + D++S GI + + C P+ D
Sbjct: 200 I-VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 43/287 (14%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D++ E+ +G + V R + G + A KI++ T +A +E + +K
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRN 203
L HPN+ + H+S+ + +V + + GG L + + R
Sbjct: 62 LQHPNIVRL---------------------HDSIQEESFHYLVFDLVTGGELFEDIVARE 100
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARV 260
+ IQ L+ ++Y HS IVHR++K EN+LL + +K+ADFG+A +
Sbjct: 101 FYSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-I 156
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
E + G GT GY++PEVL PY++ D+++ G+ L+ + P+ D +
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216
Query: 321 SAV---VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
+ + P+ P + S++ NP KR D+ +K+
Sbjct: 217 AQIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 262
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 34/243 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDG---QDVAVKILDWAEDGMVTSAEAAAIRASF 136
WE+ +L + G YG+V AYD Q VAVK L ++ + R ++
Sbjct: 16 WEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHA------RRTY 67
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
R E+ + + L H NV +G ++ P+ S S +V L G L
Sbjct: 68 R-ELRLLKHLKHENV-------IGLLDVFTPATSIEDFSE--------VYLVTTLMGADL 111
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
+ K + L+ + V + L RGL Y+HS I+HRD+K N+ ++ + L+I DFG
Sbjct: 112 NNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG 168
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLS 315
+AR Q +MTG T Y APE+ L+ YN+ D++S G + E+ +P
Sbjct: 169 LAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 225
Query: 316 FTD 318
+ D
Sbjct: 226 YID 228
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 43/287 (14%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D++ E+ +G + V R + G + A KI++ T +A +E + +K
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRN 203
L HPN+ + H+S+ + +V + + GG L + + R
Sbjct: 61 LQHPNIVRL---------------------HDSIQEESFHYLVFDLVTGGELFEDIVARE 99
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARV 260
+ IQ L+ ++Y HS IVHR++K EN+LL + +K+ADFG+A +
Sbjct: 100 FYSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-I 155
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
E + G GT GY++PEVL PY++ D+++ G+ L+ + P+ D +
Sbjct: 156 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 215
Query: 321 SAV---VRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
+ + P+ P + S++ NP KR D+ +K+
Sbjct: 216 AQIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 261
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 92 EIARGTYGTVYRGAYDGQDVAVKI----LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
++ GTY TVY+G V V + LD +E+G + AIR E+++ ++L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLD-SEEG----TPSTAIR-----EISLMKELK 61
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
H N+ + L + + +D + SR + N +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRT-----------------VGNTPRG 104
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD 267
L +V L +GL++ H I+HRD+K +N+L++ LK+ DFG+AR
Sbjct: 105 LELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164
Query: 268 MTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYP 312
+ E TL Y AP+VL G + Y+ D++S G L E+ +P
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA + I +E+
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 95
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L + K++ +++ ++++ + RGL+YL K I+HRDVK N+L+++
Sbjct: 96 MDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YMAPE L G Y+ + D++S G+ L E+
Sbjct: 154 IKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
Query: 309 MPYP 312
P P
Sbjct: 211 YPIP 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 98 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 155 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 214 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 268
Query: 359 DEVVK 363
E++K
Sbjct: 269 AELLK 273
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 41/263 (15%)
Query: 93 IARGTYGTVYRGAYDGQDV--AVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G++G V + ++V AVK+L + ++ E I + + + + + HP
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQ--KKAILKKKEEKHIMS---ERNVLLKNVKHPF 100
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK-----R 205
+ L Q+A V++Y+ GG L L R + R
Sbjct: 101 LV----------GLHFSFQTADK----------LYFVLDYINGGELFYHLQRERCFLEPR 140
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ A ++A L YLHS IV+RD+K EN+LLD+ + + DFG+ + ++
Sbjct: 141 ARF-------YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ GT Y+APEVL +PY+R D + G L+E+ P+ + ++ ++
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
Query: 326 Q--NLRPDIPRCCPSSLASIMRK 346
+ L+P+I L +++K
Sbjct: 254 KPLQLKPNITNSARHLLEGLLQK 276
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 105 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 162 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 221 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 275
Query: 359 DEVVK 363
E++K
Sbjct: 276 AELLK 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 94 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 151 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 210 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 264
Query: 359 DEVVK 363
E++K
Sbjct: 265 AELLK 269
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 148 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 205 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 264 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 318
Query: 359 DEVVK 363
E++K
Sbjct: 319 AELLK 323
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 225 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 341 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 395
Query: 359 DEVVK 363
E++K
Sbjct: 396 AELLK 400
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+++ + G +G V R + G+ VA+K + R + E+ + +K
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIK--------QCRQELSPKNRERWCLEIQIMKK 69
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+HPNV G L + N LP + +EY GG L+K+L + +
Sbjct: 70 LNHPNVVSAREVPDGLQKL----------APNDLP----LLAMEYCEGGDLRKYLNQFEN 115
Query: 206 ----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD--ANRTL-KIADFGVA 258
K+ + ++ D++ L YLH I+HRD+K EN++L R + KI D G A
Sbjct: 116 CCGLKEGPIRTLLS---DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ E T GTL Y+APE+L+ K Y D +SFG +E P+
Sbjct: 173 K-ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
VV+E+L GG L + + + + + + L + + LS LH++ ++HRD+K++++LL
Sbjct: 103 VVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
Query: 246 ANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ +K++DFG A+V + PR GT +MAPE++ PY + D++S GI + E+
Sbjct: 160 HDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 305 YCCDMPY---PDLSFTDVSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVM 358
+ PY P L + ++R NL P ++ + P SL + + +P +R
Sbjct: 219 VDGEPPYFNEPPLK----AMKMIRDNLPPRLKNLHKVSP-SLKGFLDRLLVRDPAQRATA 273
Query: 359 DEVVK 363
E++K
Sbjct: 274 AELLK 278
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 88 DIRHEIARGTYGTVYRGAYD--GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+++ + G +G V R + G+ VA+K + R + E+ + +K
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIK--------QCRQELSPKNRERWCLEIQIMKK 68
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+HPNV G L + N LP + +EY GG L+K+L + +
Sbjct: 69 LNHPNVVSAREVPDGLQKL----------APNDLP----LLAMEYCEGGDLRKYLNQFEN 114
Query: 206 ----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD--ANRTL-KIADFGVA 258
K+ + ++ D++ L YLH I+HRD+K EN++L R + KI D G A
Sbjct: 115 CCGLKEGPIRTLLS---DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ E T GTL Y+APE+L+ K Y D +SFG +E P+
Sbjct: 172 K-ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
+S E+AV +K+ H N+ TT+ + V++ + G
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYL--------------------VMQLVSG 90
Query: 194 GTL-KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL---DANRT 249
G L + L R + +VIQ L + YLH IVHRD+K EN+L + N
Sbjct: 91 GELFDRILERGVYTEKDASLVIQQVLS---AVKYLHENGIVHRDLKPENLLYLTPEENSK 147
Query: 250 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM 309
+ I DFG++++E M+ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 148 IMITDFGLSKMEQNGI--MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 310 PY 311
P+
Sbjct: 206 PF 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGL 224
K+ S+ S ++ A C+V+ + GG LK + + + A ++ GL
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 225 SYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
LH + IV+RD+K EN+LLD + ++I+D G+A V + + G GT+GYMAPEV+
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK 358
Query: 285 GKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ Y D ++ G L+E+ P+
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 40/275 (14%)
Query: 86 KLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
K ++ I +G+YG V R A + Q A++ + + + + EV + +K
Sbjct: 27 KYHLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVE-RIKTEVRLMKK 84
Query: 146 LDHPNVTKFI------------------GASMGTTNLKIPSQSATSDSHNSLPSRACCV- 186
L HPN+ + G + N+ I + + + + ++ C
Sbjct: 85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC-AMDVVKTQICPCP 143
Query: 187 -VVEYLPGGTLKKFLIRNKRKKLAF----KVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
E G++ F R+ L F K++ I + L YLH++ I HRD+K EN
Sbjct: 144 ECNEEAINGSIHGF-----RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 242 MLLDANRT--LKIADFGVA----RVEAQNPRDMTGETGTLGYMAPEVLD--GKPYNRKCD 293
L N++ +K+ DFG++ ++ MT + GT ++APEVL+ + Y KCD
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 294 VYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNL 328
+S G+ L + +P+P ++ D S V+ + L
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL 293
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGL 224
K+ S+ S ++ A C+V+ + GG LK + + + A ++ GL
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 225 SYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
LH + IV+RD+K EN+LLD + ++I+D G+A V + + G GT+GYMAPEV+
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK 358
Query: 285 GKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ Y D ++ G L+E+ P+
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKV--VIQIALDLAR 222
K+ S+ S ++ C+V+ + GG ++ + F+ I +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 282
GL +LH + I++RD+K EN+LLD + ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 283 LDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 54/291 (18%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ ++ +I G +G + R + VAVK ++ E I + ++E+
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK----------IDENVKREIINH 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L +V+EY GG L + +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHL--------------------AIVMEYASGGELFERICNA 109
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ +I G+SY H+ + HRD+K EN LLD + LKIADFG
Sbjct: 110 GRFSEDEARFFFQQLIS-------GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG 162
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD-- 313
++ + + + GT Y+APEVL K Y+ K DV+S G+ L+ + P+ D
Sbjct: 163 YSKASVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 314 --LSFTDVSSAVVR-QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+F ++ Q PD P I R + A+P KR + E+
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR-IFVADPAKRISIPEI 271
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 185 CVVVEYLPGGTLKKFLIRNKRKKLAFKV--VIQIALDLARGLSYLHSKTIVHRDVKTENM 242
C+V+ + GG ++ + F+ I + GL +LH + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 243 LLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
LLD + ++I+D G+A G GT G+MAPE+L G+ Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 303 EIYCCDMPY 311
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKV--VIQIALDLAR 222
K+ S+ S ++ C+V+ + GG ++ + F+ I +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 282
GL +LH + I++RD+K EN+LLD + ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 283 LDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 43/221 (19%)
Query: 92 EIARGTYGTVYRG--AYDGQDVAVKI--LDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
++ GTYG VY+ + VA+K L+ E+G+ AIR EV++ ++L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGV----PGTAIR-----EVSLLKELQ 91
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
H N+ + L + + A +D LKK++ +K
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND---------------------LKKYM--DKNPD 128
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL---DANRT--LKIADFGVARVEA 262
++ +V+ L G+++ HS+ +HRD+K +N+LL DA+ T LKI DFG+AR
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
Query: 263 QNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLW 302
R T E TL Y PE+L G + Y+ D++S C+W
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIW 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL- 244
+V+E L GG L F K+K + I L +S++H +VHRD+K EN+L
Sbjct: 83 LVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 245 --DANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
+ N +KI DFG AR++ + + + TL Y APE+L+ Y+ CD++S G+ L+
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 303 EIYCCDMPYP--DLSFTDVSSAVVRQNLR 329
+ +P+ D S T S+ + + ++
Sbjct: 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIK 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 33/235 (14%)
Query: 86 KLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
K D + I RG V R + G + AVKI++ + + + + +R + R+E +
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL-SPEQLEEVREATRRETHIL 153
Query: 144 QKL-DHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIR 202
+++ HP++ I DS+ S S +V + + G L +L
Sbjct: 154 RQVAGHPHIITLI------------------DSYES--SSFMFLVFDLMRKGELFDYL-- 191
Query: 203 NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
++ L+ K I L +S+LH+ IVHRD+K EN+LLD N ++++DFG +
Sbjct: 192 TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHL 250
Query: 263 QNPRDMTGETGTLGYMAPEVL-----DGKP-YNRKCDVYSFGICLWEIYCCDMPY 311
+ + GT GY+APE+L + P Y ++ D+++ G+ L+ + P+
Sbjct: 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KXQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 165 KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKV--VIQIALDLAR 222
K+ S+ S ++ C+V+ + GG ++ + F+ I +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 282
GL +LH + I++RD+K EN+LLD + ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 283 LDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 52/240 (21%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ D +I G +G + R + VAVK ++ AAI + ++E+
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE----------RGAAIDENVQREIINH 70
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L I ++EY GG L + +
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAI--------------------IMEYASGGELYERICNA 110
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ L G+SY HS I HRD+K EN LLD + LKI DFG
Sbjct: 111 GRFSEDEARFFFQ-------QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163
Query: 257 VAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD 313
++ V P+ GT Y+APEVL + Y+ K DV+S G+ L+ + P+ D
Sbjct: 164 YSKSSVLHSQPK---STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +K+ADFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +K+ADFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+R EI G++G VY R + + VA+K + + + ++ +EV QK
Sbjct: 58 DLR-EIGHGSFGAVYFARDVRNSEVVAIKKMSY------SGKQSNEKWQDIIKEVRFLQK 110
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L HPN ++ G L +V+EY G L+ +
Sbjct: 111 LRHPNTIQYRGCY--------------------LREHTAWLVMEYCLGSASD--LLEVHK 148
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
K L + + +GL+YLHS ++HRDVK N+LL +K+ DFG A + A P
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--P 206
Query: 266 RDMTGETGTLGYMAPEV---LDGKPYNRKCDVYSFGICLWEIYCCDMP--YPDLSFTDVS 320
+ GT +MAPEV +D Y+ K DV+S GI C ++ P L +
Sbjct: 207 ANXF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNMNAM 259
Query: 321 SAV--VRQNLRPDIPRCCPSS-LASIMRKCWDANPDKRPVMDEVVK 363
SA+ + QN P + S + + C P RP + ++K
Sbjct: 260 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R GQ AVKI+D A+ TS+ + ++E ++ L HP+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAK---FTSSPGLSTE-DLKREASICHMLKHPH 87
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + + ++ +SD +V E++ G L +++ +
Sbjct: 88 IVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 211 K--VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNP 265
V + L Y H I+HRDVK EN+LL + +K+ DFGVA ++
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
G GT +MAPEV+ +PY + DV+ G+ L+ + +P+
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 35 IGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 86
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 87 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 128
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT 185
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+R EI G++G VY R + + VA+K + + + ++ +EV QK
Sbjct: 19 DLR-EIGHGSFGAVYFARDVRNSEVVAIKKMSY------SGKQSNEKWQDIIKEVRFLQK 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L HPN ++ G L +V+EY G L+ +
Sbjct: 72 LRHPNTIQYRGCY--------------------LREHTAWLVMEYCLGSASD--LLEVHK 109
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
K L + + +GL+YLHS ++HRDVK N+LL +K+ DFG A + A P
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--P 167
Query: 266 RDMTGETGTLGYMAPEV---LDGKPYNRKCDVYSFGICLWEIYCCDMP--YPDLSFTDVS 320
+ GT +MAPEV +D Y+ K DV+S GI C ++ P L +
Sbjct: 168 ANXF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNMNAM 220
Query: 321 SAV--VRQNLRPDIPRCCPSS-LASIMRKCWDANPDKRPVMDEVVK 363
SA+ + QN P + S + + C P RP + ++K
Sbjct: 221 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +K+ADFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEIXINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 59
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 60 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 97
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 98 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEIXINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 74 PRKTEEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAA 131
P E ++ +I I +G++G V + + A+K ++ + E
Sbjct: 4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK-----CVERNE 58
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+R F+ E+ + Q L+HP + + ++ +VV+ L
Sbjct: 59 VRNVFK-ELQIMQGLEHPFLVNLWYSFQDEEDM--------------------FMVVDLL 97
Query: 192 PGGTLKKFLIRNKR-KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTL 250
GG L+ L +N K+ K+ I +L L YL ++ I+HRD+K +N+LLD + +
Sbjct: 98 LGGDLRYHLQQNVHFKEETVKLFI---CELVMALDYLQNQRIIHRDMKPDNILLDEHGHV 154
Query: 251 KIADFGVARVEAQNPRD--MTGETGTLGYMAPEVLD---GKPYNRKCDVYSFGICLWEIY 305
I DF +A A PR+ +T GT YMAPE+ G Y+ D +S G+ +E+
Sbjct: 155 HITDFNIA---AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
Query: 306 CCDMPYPDLSFTDVSSAVVRQNLRPDI---PRCCPSSLASIMRKCWDANPDKR 355
PY S T SS + + P + S+++K + NPD+R
Sbjct: 212 RGRRPYHIRSST--SSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 96 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 155
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 215 DMWSLGVIMYILLCGYPPF 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEIXINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 201 DMWSLGVIMYILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 132 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 191
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 251 DMWSLGVIMYILLCGYPPF 269
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 126 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 185
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 245 DMWSLGVIMYILLCGYPPF 263
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 92 EIARGTYGTVYRG---AYDGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
EI G YG V++ G+ VA+K + E+GM S IR EVAV + L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST----IR-----EVAVLRHL 68
Query: 147 D---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ HPNV + + +D L +V E++ L +L +
Sbjct: 69 ETFEHPNVVRLFDVCT----------VSRTDRETKL-----TLVFEHV-DQDLTTYLDKV 112
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + + L RGL +LHS +VHRD+K +N+L+ ++ +K+ADFG+AR+ +
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+T TL Y APEVL Y D++S G E++
Sbjct: 173 Q-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 88 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 147
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 207 DMWSLGVIMYILLCGYPPF 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 61 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 98
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 99 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 80 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 139
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 199 DMWSLGVIMYILLCGYPPF 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 86 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 145
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 205 DMWSLGVIMYILLCGYPPF 223
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 182 RACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
R +++E + GG L + + + +I D+ + +LHS I HRDVK EN
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 242 MLL---DANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFG 298
+L + + LK+ DFG A+ QN + T Y+APEVL + Y++ CD++S G
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 216
Query: 299 ICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
+ ++ + C P+ + +S + R+
Sbjct: 217 VIMYILLCGFPPFYSNTGQAISPGMKRR 244
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 87 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 146
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 206 DMWSLGVIMYILLCGYPPF 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 52/240 (21%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ ++ +I G +G + R + VAVK ++ E I A+ ++E+
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIAANVKREIINH 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L I V+EY GG L + +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERICNA 109
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ +I G+SY H+ + HRD+K EN LLD + LKI DFG
Sbjct: 110 GRFSEDEARFFFQQLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 162
Query: 257 VAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD 313
++ V P+ GT Y+APEVL K Y+ K DV+S G+ L+ + P+ D
Sbjct: 163 YSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 81 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 140
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 200 DMWSLGVIMYILLCGYPPF 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 92
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 93 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 134
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT 191
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 201 DMWSLGVIMYILLCGYPPF 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 87
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 88 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 129
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMT 186
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 36 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 87
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 88 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 129
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 186
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 86
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 87 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 128
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT 185
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 37/223 (16%)
Query: 86 KLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
KLD + G + TVY R Q VA+K + G + A+ R + R E+ +
Sbjct: 14 KLDF---LGEGQFATVYKARDKNTNQIVAIKKIKL---GHRSEAKDGINRTALR-EIKLL 66
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
Q+L HPN+ + A +N+ + +D + +I++
Sbjct: 67 QELSHPNIIGLLDAFGHKSNISLVFDFMETDL----------------------EVIIKD 104
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
L + L +GL YLH I+HRD+K N+LLD N LK+ADFG+A+
Sbjct: 105 NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 306
R + T Y APE+L G +Y G+ +W + C
Sbjct: 165 PNRAYXHQVVTRWYRAPELLFG------ARMYGVGVDMWAVGC 201
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 80 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 139
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 199 DMWSLGVIMYILLCGYPPF 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 83
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 84 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMT 182
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 182 RACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
R +++E + GG L + + + +I D+ + +LHS I HRDVK EN
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 242 MLL---DANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFG 298
+L + + LK+ DFG A+ QN + T Y+APEVL + Y++ CD++S G
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 197
Query: 299 ICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
+ ++ + C P+ + +S + R+
Sbjct: 198 VIMYILLCGFPPFYSNTGQAISPGMKRR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KXQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 88
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 89 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 130
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR A +MT
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 84 LAKLDIRHEIARGTYGTVYRGAYDGQDVAVKI----LDWAEDGMVTSAEAAAIRASFRQE 139
+ K + +I GTYGTV++ V + LD ++G+ +SA +E
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---------LRE 51
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+ + ++L H N+ + H+ L S +V LKK+
Sbjct: 52 ICLLKELKHKNIVRL---------------------HDVLHSDKKLTLVFEFCDQDLKKY 90
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
+ L ++V L +GL + HS+ ++HRD+K +N+L++ N LK+ADFG+AR
Sbjct: 91 F-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEI 304
R + E TL Y P+VL G K Y+ D++S G E+
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 101
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 102 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 143
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 200
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 40 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 91
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 92 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 133
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 134 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 190
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 44/262 (16%)
Query: 55 DIQLEKHLSRVWSREREVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAY--DGQDVA 112
D Q K L +++++V K +++E K+ E+ G G V++ ++ G +A
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKDDDFE----KIS---ELGAGNGGVVFKVSHKPSGLVMA 97
Query: 113 VKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSAT 172
K++ AIR +E+ V + + P + F GA + I
Sbjct: 98 RKLIHLEIK--------PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI------ 143
Query: 173 SDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-T 231
+E++ GG+L + L K ++ +++ ++++ + +GL+YL K
Sbjct: 144 --------------CMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 232 IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNR 290
I+HRDVK N+L+++ +K+ DFGV+ Q M GT YM+PE L G Y+
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSV 244
Query: 291 KCDVYSFGICLWEIYCCDMPYP 312
+ D++S G+ L E+ P P
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIP 266
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 44/269 (16%)
Query: 48 KIDFKSWDIQLEKHLSRVWSREREVLPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAY- 106
K++ D Q K L +++++V K +++E K+ E+ G G V++ ++
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFE----KIS---ELGAGNGGVVFKVSHK 55
Query: 107 -DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLK 165
G +A K++ AIR +E+ V + + P + F GA
Sbjct: 56 PSGLVMARKLIHLEIK--------PAIRNQIIRELQVLHECNSPYIVGFYGA-------- 99
Query: 166 IPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLS 225
SD S + +E++ GG+L + L K ++ +++ ++++ + +GL+
Sbjct: 100 -----FYSDGEIS-------ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLT 145
Query: 226 YLHSK-TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVL 283
YL K I+HRDVK N+L+++ +K+ DFGV+ Q M GT YM+PE L
Sbjct: 146 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPERL 202
Query: 284 DGKPYNRKCDVYSFGICLWEIYCCDMPYP 312
G Y+ + D++S G+ L E+ P P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 49 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 100
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 101 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 142
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 199
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 88
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 89 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 130
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR A +MT
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 92 EIARGTYGTVYRG---AYDGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
EI G YG V++ G+ VA+K + E+GM S IR EVAV + L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST----IR-----EVAVLRHL 68
Query: 147 D---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ HPNV + + +D L +V E++ L +L +
Sbjct: 69 ETFEHPNVVRLFDVCT----------VSRTDRETKL-----TLVFEHV-DQDLTTYLDKV 112
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + + L RGL +LHS +VHRD+K +N+L+ ++ +K+ADFG+AR+ +
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+T TL Y APEVL Y D++S G E++
Sbjct: 173 Q-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILD-------------------KQKVVKLKQIEHTL 90
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY PGG + L R R +
Sbjct: 91 NEKRIQQAVNFPFL-VKLEFSFKDNSN------LYMVLEYAPGGEMFSHLRRIGRFSEPH 143
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +K+ADFG A + +
Sbjct: 144 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA-------KRV 192
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 253 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
M E T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP+ + +
Sbjct: 237 VIEQLGTP-----CPAFMKKL 252
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 88
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 89 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 130
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR A +MT
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 92 EIARGTYGTVYRG---AYDGQDVAVKIL--DWAEDGMVTSAEAAAIRASFRQEVAVWQKL 146
EI G YG V++ G+ VA+K + E+GM S IR EVAV + L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST----IR-----EVAVLRHL 68
Query: 147 D---HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ HPNV + + +D L +V E++ L +L +
Sbjct: 69 ETFEHPNVVRLFDVCT----------VSRTDRETKL-----TLVFEHV-DQDLTTYLDKV 112
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ + + + L RGL +LHS +VHRD+K +N+L+ ++ +K+ADFG+AR+ +
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIY 305
+T TL Y APEVL Y D++S G E++
Sbjct: 173 Q-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 77
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 78 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 119
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 176
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA SD S + +E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGA-------------FYSDGEIS-------ICMEH 85
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 309 MPYP 312
P P
Sbjct: 201 YPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA SD S + +E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGA-------------FYSDGEIS-------ICMEH 85
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 309 MPYP 312
P P
Sbjct: 201 YPIP 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA + I +E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 309 MPYP 312
P P
Sbjct: 201 YPIP 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 88 DIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D+ + G YG V + VAVKI+D A + ++E+ +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINAM 61
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L+H NV KF G N++ + +EY GG L F
Sbjct: 62 LNHENVVKFYGHRR-EGNIQY-------------------LFLEYCSGGEL--FDRIEPD 99
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ + L G+ YLH I HRD+K EN+LLD LKI+DFG+A V N
Sbjct: 100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 266 RD--MTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPY 311
R+ + GTL Y+APE+L + ++ + DV+S GI L + ++P+
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA + I +E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 309 MPYP 312
P P
Sbjct: 201 YPIP 204
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KSQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+ R +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA + I +E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 309 MPYP 312
P P
Sbjct: 201 YPIP 204
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPE 281
G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R T GT Y+APE
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA 341
VL K ++ + DV+S G ++ + P+ + S + +++N IP+ A
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAA 245
Query: 342 SIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIPTR 392
S+++K +P RP ++E++ + TS G IP CL IP R
Sbjct: 246 SLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLT-IPPR 290
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 83
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 84 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 182
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 93
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 94 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 135
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 192
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 93
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 94 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 135
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 192
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 87
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 88 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 129
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 186
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPE 281
G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R T GT Y+APE
Sbjct: 133 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA 341
VL K ++ + DV+S G ++ + P+ + S + +++N IP+ A
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAA 249
Query: 342 SIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIPTR 392
S+++K +P RP ++E++ + TS G IP CL IP R
Sbjct: 250 SLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLT-IPPR 294
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 87
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 88 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 129
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 186
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGY 277
+ G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R T GT Y
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNY 183
Query: 278 MAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCP 337
+APEVL K ++ + DV+S G ++ + P+ + S + +++N IP+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHIN 241
Query: 338 SSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIP 390
AS+++K +P RP ++E++ + TS G IP CL P
Sbjct: 242 PVAASLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLTIPP 289
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 92
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 93 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 134
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 191
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 126 NLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHR 185
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A+ E + +T T Y+APEVL + Y++ C
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 293 DVYSFGICLWEIYCCDMPY 311
D +S G+ + + C P+
Sbjct: 245 DXWSLGVIXYILLCGYPPF 263
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSKPFQSIIHA------KRTYR-ELRLLKHMKHE 93
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 94 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 135
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 192
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 83
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 84 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 182
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 88
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 89 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 130
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 187
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 104
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 105 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 146
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 203
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 83
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 84 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 125
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 182
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 50 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 101
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 102 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 143
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 200
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 33/239 (13%)
Query: 131 AIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEY 190
AIR +E+ V + + P + F GA SD S + +E+
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGA-------------FYSDGEIS-------ICMEH 104
Query: 191 LPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRT 249
+ GG+L + L K ++ +++ ++++ + +GL+YL K I+HRDVK N+L+++
Sbjct: 105 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 162
Query: 250 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ DFGV+ Q M GT YM+PE L G Y+ + D++S G+ L E+
Sbjct: 163 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
Query: 309 MPY----PDLSFTDVSSAVVRQNLRPDIPRCCPS-SLASIMRKCWDANPDKRPVMDEVV 362
P ++ ++ +V + P +P S + KC NP +R + +++
Sbjct: 220 YPIGSGSGSMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 182 RACCVVVEYLPGGTLKKFLIR-NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
R +V+EY+PGG L + + +K A ++ L L +HS +HRDVK +
Sbjct: 142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDAIHSMGFIHRDVKPD 197
Query: 241 NMLLDANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKP----YNRKCDVY 295
NMLLD + LK+ADFG ++ + GT Y++PEVL + Y R+CD +
Sbjct: 198 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257
Query: 296 SFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
S G+ L+E+ D P+ S S ++
Sbjct: 258 SVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 182 RACCVVVEYLPGGTLKKFLIR-NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
R +V+EY+PGG L + + +K A ++ L L +HS +HRDVK +
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDAIHSMGFIHRDVKPD 202
Query: 241 NMLLDANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKP----YNRKCDVY 295
NMLLD + LK+ADFG ++ + GT Y++PEVL + Y R+CD +
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 296 SFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
S G+ L+E+ D P+ S S ++
Sbjct: 263 SVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 49 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 100
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 101 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 142
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 199
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 86
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 87 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 128
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 185
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 29 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 80
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 81 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 123 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 179
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 77
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K KL
Sbjct: 78 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCAKLT 119
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 176
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 182 RACCVVVEYLPGGTLKKFLIR-NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTE 240
R +V+EY+PGG L + + +K A ++ L L +HS +HRDVK +
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDAIHSMGFIHRDVKPD 202
Query: 241 NMLLDANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKP----YNRKCDVY 295
NMLLD + LK+ADFG ++ + GT Y++PEVL + Y R+CD +
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 296 SFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
S G+ L+E+ D P+ S S ++
Sbjct: 263 SVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
M E T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 47/308 (15%)
Query: 86 KLDIRHEIARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+L +R +A G + VY + QDV ++A ++++ E + QEV +K
Sbjct: 29 RLRVRRVLAEGGFAFVY----EAQDVGSG-REYALKRLLSNEEEK--NRAIIQEVCFMKK 81
Query: 146 LD-HPNVTKFI-GASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIR- 202
L HPN+ +F AS+G +S T + L + C G L +FL +
Sbjct: 82 LSGHPNIVQFCSAASIGK------EESDTGQAEFLLLTELC--------KGQLVEFLKKM 127
Query: 203 NKRKKLAFKVVIQIALDLARGLSYLHSKT--IVHRDVKTENMLLDANRTLKIADFGVARV 260
R L+ V++I R + ++H + I+HRD+K EN+LL T+K+ DFG A
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
Query: 261 EAQNP-------------RDMTGETGTLGYMAPEVLD---GKPYNRKCDVYSFGICLWEI 304
+ P ++T T + Y PE++D P K D+++ G L+ +
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 305 YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKL 364
P+ D + + + + ++ P + + S++R NP++R + EVV
Sbjct: 247 CFRQHPFEDGAKLRIVNG--KYSIPPHDTQY--TVFHSLIRAMLQVNPEERLSIAEVVHQ 302
Query: 365 LEAVNTSK 372
L+ + ++
Sbjct: 303 LQEIAAAR 310
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 86
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 87 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 128
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 185
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 78
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 79 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 120
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 177
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 78
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 79 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 120
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 177
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 28 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 79
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 80 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 121
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 122 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 178
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 58/293 (19%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ ++ +I G +G + R + VAVK ++ E I + ++E+
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREIINH 68
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L I V+EY GG L + +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERICNA 108
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ +I G+SY H+ + HRD+K EN LLD + LKI DFG
Sbjct: 109 GRFSEDEARFFFQQLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 161
Query: 257 VAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD 313
++ V P+ GT Y+APEVL K Y+ K DV+S G+ L+ + P+ D
Sbjct: 162 YSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
Query: 314 ----LSFTDVSSAVVR-QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+F ++ Q PD P ++ + + A+P KR + E+
Sbjct: 219 PEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 270
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 101
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 102 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 143
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +M
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMX 200
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 84 LAKLDIRHEIARGTYGTVYRGAYDGQDVAVKI----LDWAEDGMVTSAEAAAIRASFRQE 139
+ K + +I GTYGTV++ V + LD ++G+ +SA +E
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---------LRE 51
Query: 140 VAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKF 199
+ + ++L H N+ + H+ L S +V LKK+
Sbjct: 52 ICLLKELKHKNIVRL---------------------HDVLHSDKKLTLVFEFCDQDLKKY 90
Query: 200 LIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR 259
+ L ++V L +GL + HS+ ++HRD+K +N+L++ N LK+A+FG+AR
Sbjct: 91 F-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
Query: 260 VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEI 304
R + E TL Y P+VL G K Y+ D++S G E+
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 26 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 77
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 78 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 119
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 176
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 16/135 (11%)
Query: 186 VVVEYLPGGTLKKFL----IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG L + + K K + + +ALD +HS ++HRDVK +N
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKF-YTAEVVLALDA------IHSMGLIHRDVKPDN 204
Query: 242 MLLDANRTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLDGKP----YNRKCDVYS 296
MLLD + LK+ADFG +++ GT Y++PEVL + Y R+CD +S
Sbjct: 205 MLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 264
Query: 297 FGICLWEIYCCDMPY 311
G+ L+E+ D P+
Sbjct: 265 VGVFLFEMLVGDTPF 279
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 93 IARGTYGTVYR-----GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+ +G YG V++ GA G+ A+K+L A M+ A A + E + +++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKA---MIV--RNAKDTAHTKAERNILEEVK 79
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HP + I A L + ++EYL GG L ++ +R+
Sbjct: 80 HPFIVDLIYAFQTGGKLYL--------------------ILEYLSGGEL---FMQLEREG 116
Query: 208 LAFKVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
+ + L +++ L +LH K I++RD+K EN++L+ +K+ DFG+ + +
Sbjct: 117 IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
GT+ YMAPE+L +NR D +S G ++++ P+
Sbjct: 177 VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 181
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 242 VIEQLGTP-----CPEFMKKL 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 231 VIEQLGTP-----CPEFMKKL 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 93 IARGTYGTVYR-----GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+ +G YG V++ GA G+ A+K+L A M+ A A + E + +++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKA---MIV--RNAKDTAHTKAERNILEEVK 79
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
HP + I A L + ++EYL GG L ++ +R+
Sbjct: 80 HPFIVDLIYAFQTGGKLYL--------------------ILEYLSGGEL---FMQLEREG 116
Query: 208 LAFKVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
+ + L +++ L +LH K I++RD+K EN++L+ +K+ DFG+ + +
Sbjct: 117 IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
GT+ YMAPE+L +NR D +S G ++++ P+
Sbjct: 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA+KI+ + SA A + E+ + +KL+HP + K
Sbjct: 36 KKVAIKIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 80
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 81 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA+KI+ + SA A + E+ + +KL+HP + K
Sbjct: 42 KKVAIKIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 86
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 87 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 137
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 196
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 197 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 51 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V +L G L K L K + L
Sbjct: 102 NI-------IGINDIIRAPTIEQMKDVY----------LVTHLMGADLYKLL---KTQHL 141
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDH 200
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 324 V 324
+
Sbjct: 261 L 261
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA+KI+ + SA A + E+ + +KL+HP + K
Sbjct: 35 KKVAIKIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 79
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 80 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 130
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 189
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 190 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA+KI+ + SA A + E+ + +KL+HP + K
Sbjct: 36 KKVAIKIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 80
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 81 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA+KI+ + SA A + E+ + +KL+HP + K
Sbjct: 36 KKVAIKIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 80
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 81 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 192
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 193 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +++ DFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 52/240 (21%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ ++ +I G +G + R + VAVK ++ E I + ++E+
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREIINH 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L I V+EY GG L + +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERICNA 109
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ +I G+SY H+ + HRD+K EN LLD + LKI FG
Sbjct: 110 GRFSEDEARFFFQQLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
Query: 257 VAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD 313
++ V P+D GT Y+APEVL K Y+ K DV+S G+ L+ + P+ D
Sbjct: 163 YSKSSVLHSQPKDT---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +++ DFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI D+G+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 90
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I + N ++ S NS +V+EY PGG + L R R +
Sbjct: 91 NEKRI---LQAVNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+++D +K+ DFG A + +
Sbjct: 144 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA-------KRV 192
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 253 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 90
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I + N ++ S NS +V+EY PGG + L R R +
Sbjct: 91 NEKRI---LQAVNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFXEPH 143
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+++D +K+ DFG A + +
Sbjct: 144 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA-------KRV 192
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 253 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILD-------------------KQKVVKLKQIEHTL 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I ++ L + + + D+ N +V+EY+PGG + L R R +
Sbjct: 90 NEKRILQAVNFPFL-VKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+L+D +++ DFG A + +
Sbjct: 143 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-------KRV 191
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 252 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 77
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 78 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 119
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +M
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA 176
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 47/271 (17%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
+ G++G V + G A+KILD +Q+V ++++H
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILD-------------------KQKVVKLKQIEHTL 90
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR--KKL 208
K I + N ++ S NS +V+EY PGG + L R R +
Sbjct: 91 NEKRI---LQAVNFPFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
A QI L YLHS +++RD+K EN+++D +K+ DFG A + +
Sbjct: 144 ARFYAAQIVLTF----EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA-------KRV 192
Query: 269 TGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+ + +V
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 325 RQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+R P S L ++R + KR
Sbjct: 253 SGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 33/204 (16%)
Query: 111 VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQS 170
VAVKI+D A + ++E+ + + L+H NV KF G N++
Sbjct: 34 VAVKIVD--------MKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQY---- 80
Query: 171 ATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK 230
+ +EY GG L F + + L G+ YLH
Sbjct: 81 ---------------LFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 231 TIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD--MTGETGTLGYMAPEVLDGKPY 288
I HRD+K EN+LLD LKI+DFG+A V N R+ + GTL Y+APE+L + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 289 NRK-CDVYSFGICLWEIYCCDMPY 311
+ + DV+S GI L + ++P+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 39/276 (14%)
Query: 93 IARGTYGTVYRG--AYDGQDVAVKILD---WAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+ +G++ VYR + G +VA+K++D + GMV + EV + +L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ---------NEVKIHCQLK 69
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLP-SRACCVVVEYLPGGTLKKFLIRNKRK 206
HP++ + +N S +V+E G + ++L +N+ K
Sbjct: 70 HPSILEL---------------------YNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVK 107
Query: 207 KLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPR 266
+ + G+ YLHS I+HRD+ N+LL N +KIADFG+A
Sbjct: 108 PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167
Query: 267 DMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ 326
GT Y++PE+ + + DV+S G + + P+ + + + VV
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 327 NLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+ ++P ++ + NP R + V+
Sbjct: 228 DY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGY 277
+ G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R GT Y
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNY 181
Query: 278 MAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCP 337
+APEVL K ++ + DV+S G ++ + P+ + S + +++N IP+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHIN 239
Query: 338 SSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIPTR 392
AS+++K +P RP ++E++ + TS G IP CL IP R
Sbjct: 240 PVAASLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLT-IPPR 288
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +K+ DFG+A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LMIDQQGYIKVTDFGLA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPE 281
G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R GT Y+APE
Sbjct: 151 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 209
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA 341
VL K ++ + DV+S G ++ + P+ + S + +++N IP+ A
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAA 267
Query: 342 SIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIPTR 392
S+++K +P RP ++E++ + TS G IP CL IP R
Sbjct: 268 SLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLT-IPPR 312
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 164
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 165 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 175 SHNSLPSRACCV--------VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSY 226
+H L CC V+E++ GG L + +++R A A ++ L +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY--AAEIISALMF 139
Query: 227 LHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGK 286
LH K I++RD+K +N+LLD K+ADFG+ + N GT Y+APE+L
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 287 PYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRK 346
Y D ++ G+ L+E+ C P+ + D+ A++ + P I++
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV--YPTWLHEDATGILKS 257
Query: 347 CWDANPDKR 355
NP R
Sbjct: 258 FMTKNPTMR 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPE 281
G YLH ++HRD+K N+ L+ + +KI DFG+A +VE R GT Y+APE
Sbjct: 153 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 211
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA 341
VL K ++ + DV+S G ++ + P+ + S + +++N IP+ A
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAA 269
Query: 342 SIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIPTR 392
S+++K +P RP ++E++ + TS G IP CL IP R
Sbjct: 270 SLIQKMLQTDPTARPTINELLN--DEFFTS---GYIPARLPITCLT-IPPR 314
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 164
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 165 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 38/223 (17%)
Query: 86 KLDIRHEIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
KLD ++ GTY TVY+G D VA+K + + A AIR EV++
Sbjct: 6 KLD---KLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIR-----EVSLL 54
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPS-RACCVVVEYLPGGTLKKFLIR 202
+ L H N+ H+ + + ++ +V EYL LK++L
Sbjct: 55 KDLKHANIVTL---------------------HDIIHTEKSLTLVFEYL-DKDLKQYL-D 91
Query: 203 NKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
+ + V L RGL+Y H + ++HRD+K +N+L++ LK+ADFG+AR ++
Sbjct: 92 DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKS 151
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEI 304
+ E TL Y P++L G Y+ + D++ G +E+
Sbjct: 152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 157
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 158 LLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 211 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 104
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 105 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 146
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +M
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMX 203
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 45/301 (14%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVK----ILDWAEDGMVTSAEAAA 131
+ W+ L EI RG YG+V + + GQ +AVK +D E +
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74
Query: 132 IRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYL 191
+R+S D P + +F GA + I S S + V+ + +
Sbjct: 75 MRSS-----------DCPYIVQFYGALFREGDCWI-CMELMSTSFDKFYKYVYSVLDDVI 122
Query: 192 PGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKT-IVHRDVKTENMLLDANRTL 250
P L K I L + L++L I+HRD+K N+LLD + +
Sbjct: 123 PEEILGK-----------------ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNI 165
Query: 251 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDG----KPYNRKCDVYSFGICLWEIYC 306
K+ DFG++ + + T + G YMAPE +D + Y+ + DV+S GI L+E+
Sbjct: 166 KLCDFGISG-QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT 224
Query: 307 CDMPYPDL-SFTDVSSAVVRQN---LRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
PYP S D + VV+ + L R S + + C + KRP E++
Sbjct: 225 GRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 363 K 363
K
Sbjct: 285 K 285
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DF +AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +K+ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +K+ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 172
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +K+ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 173 LMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA++I+ + SA A + E+ + +KL+HP + K
Sbjct: 161 KKVAIRIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 205
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 206 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 256
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 315
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 316 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 109 QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPS 168
+ VA++I+ + SA A + E+ + +KL+HP + K
Sbjct: 175 KKVAIRIIS-KRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI-------------- 219
Query: 169 QSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLH 228
N + +V+E + GG L ++ NKR K A + + LA + YLH
Sbjct: 220 -------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 270
Query: 229 SKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-- 283
I+HRD+K EN+LL + +KI DFG +++ + M GT Y+APEVL
Sbjct: 271 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 329
Query: 284 -DGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQ------NLRPDIPRCC 336
YNR D +S G+ L + C YP S ++ Q N P++
Sbjct: 330 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 337 PSSLASIMRKCWDANPDKRPVMDEVVK 363
+++K +P R +E ++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 40/230 (17%)
Query: 87 LDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQ 144
LD +I G+ G V R + G+ VAVK++D + R EV + +
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---------RELLFNEVVIMR 97
Query: 145 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK 204
H NV + + + L V++E+L GG L + + +
Sbjct: 98 DYQHFNVVEMYKSYLVGEEL--------------------WVLMEFLQGGALTDIVSQVR 137
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQN 264
+ V + L + L+YLH++ ++HRD+K++++LL + +K++DFG AQ
Sbjct: 138 LNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC---AQI 191
Query: 265 PRDMTGE---TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+D+ GT +MAPEV+ Y + D++S GI + E+ + PY
Sbjct: 192 SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 39/256 (15%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V +YD G +AVK L ++ + + ++R E+ + + + H
Sbjct: 59 VGSGAYGSVC-SSYDVKSGLKIAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 110
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P+ SL +V +L G L + K +KL
Sbjct: 111 NV-------IGLLDVFTPA--------TSLEEFNDVYLVTHLMGADLNNIV---KCQKLT 152
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI DFG+AR +MT
Sbjct: 153 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT 209
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNL 328
G T Y APE+ L+ YN D++S G + E+ +P + ++R
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
Query: 329 RPDIPRCCPSSLASIM 344
P P+S+ S M
Sbjct: 270 TP------PASVISRM 279
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 212 VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT-- 269
V + I + +A + +LHSK ++HRD+K N+ + +K+ DFG+ Q+ + T
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 270 ----------GETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
G+ GT YM+PE + G Y+ K D++S G+ L+E+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ G + V R G++ A K + + ++S+ R +EV + +++ HP
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFI---KKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ H+ ++ +++E + GG L FL +++ L
Sbjct: 69 NIITL---------------------HDIFENKTDVVLILELVSGGELFDFLA--EKESL 105
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RVEAQ 263
Q + G+ YLHSK I H D+K EN MLLD N +K+ DFG+A ++EA
Sbjct: 106 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 166 N--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G+ + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G+ + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +++ DFG+A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LMIDQQGYIQVTDFGLA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI FG+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 186 VVVEYLPGGT----LKKFLIRNKRKK--LAFKVVIQIALDLARGLSYLHSKTIVHRDVKT 239
+V++ L GG+ +K + + + K L + I ++ GL YLH +HRDVK
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 240 ENMLLDANRTLKIADFGVARVEAQN---PRDMTGET--GTLGYMAPEVLDG-KPYNRKCD 293
N+LL + +++IADFGV+ A R+ +T GT +MAPEV++ + Y+ K D
Sbjct: 150 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 209
Query: 294 VYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIP---------RCCPSSLASIM 344
++SFGI E+ PY V + QN P + + S ++
Sbjct: 210 IWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI 268
Query: 345 RKCWDANPDKRPVMDEVVK 363
C +P+KRP E+++
Sbjct: 269 SLCLQKDPEKRPTAAELLR 287
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ G + V R G++ A K + + ++S+ R +EV + +++ HP
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFI---KKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ H+ ++ +++E + GG L FL +++ L
Sbjct: 76 NIITL---------------------HDIFENKTDVVLILELVSGGELFDFLA--EKESL 112
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RVEAQ 263
Q + G+ YLHSK I H D+K EN MLLD N +K+ DFG+A ++EA
Sbjct: 113 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 173 N--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 186 VVVEYLPGGT----LKKFLIRNKRKK--LAFKVVIQIALDLARGLSYLHSKTIVHRDVKT 239
+V++ L GG+ +K + + + K L + I ++ GL YLH +HRDVK
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 240 ENMLLDANRTLKIADFGVARVEAQN---PRDMTGET--GTLGYMAPEVLDG-KPYNRKCD 293
N+LL + +++IADFGV+ A R+ +T GT +MAPEV++ + Y+ K D
Sbjct: 145 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 294 VYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCP---------SSLASIM 344
++SFGI E+ PY V + QN P + S ++
Sbjct: 205 IWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI 263
Query: 345 RKCWDANPDKRPVMDEVVK 363
C +P+KRP E+++
Sbjct: 264 SLCLQKDPEKRPTAAELLR 282
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY PGG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+++D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LMIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 40 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 80
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 81 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 133
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 190 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 243 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV 260
R R A A + YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGR--FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA-- 188
Query: 261 EAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 244 IQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 58/293 (19%)
Query: 86 KLDIRHEIARGTYGT--VYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ ++ +I G +G + R + VAVK ++ E I + ++E+
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREIINH 69
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ L HPN+ +F + T+L I V+EY GG L + +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERICNA 109
Query: 204 KR-----KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFG 256
R + F+ +I G+SY H+ + HRD+K EN LLD + LKI FG
Sbjct: 110 GRFSEDEARFFFQQLIS-------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
Query: 257 VAR--VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRK-CDVYSFGICLWEIYCCDMPYPD 313
++ V P+ GT Y+APEVL K Y+ K DV+S G+ L+ + P+ D
Sbjct: 163 YSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Query: 314 ----LSFTDVSSAVVR-QNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
+F ++ Q PD P ++ + + A+P KR + E+
Sbjct: 220 PEEPKNFRKTIHRILNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 100
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 153
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 154 RRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 210 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 263 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAP 280
+G+ YLH+ ++HRD+K N+ L+ + +KI DFG+A ++E R T GT Y+AP
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 281 EVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSL 340
EVL K ++ + D++S G L+ + P+ + S + +++N +PR
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVA 269
Query: 341 ASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIP 390
++++R+ A+P RP + E+ L + TS G P CL P
Sbjct: 270 SALIRRMLHADPTLRPSVAEL--LTDEFFTS---GYAPMRLPTSCLTVPP 314
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI D G+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 EPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT E T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 169
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 230 VIEQLGTP-----CPEFMKKL 245
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ G + V R G++ A K + + + S+ R +EV + +++ HP
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFI---KKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ H+ ++ +++E + GG L FL +++ L
Sbjct: 90 NIITL---------------------HDIFENKTDVVLILELVSGGELFDFLA--EKESL 126
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RVEAQ 263
Q + G+ YLHSK I H D+K EN MLLD N +K+ DFG+A ++EA
Sbjct: 127 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 264 NPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 187 N--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 35 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 86 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 125
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDH 184
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 324 V 324
+
Sbjct: 245 L 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 74
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 75 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 127
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 128 RRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 183
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 184 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 236
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 237 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 100
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 101 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 153
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 154 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 210 -------KRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 263 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI D G+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 93 IARGTYGTVYRGAYD---GQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G YG+V A+D G VAVK L ++ + + ++R E+ + + + H
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYR-ELRLLKHMKHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
NV +G ++ P++S L +V +L G L + K +KL
Sbjct: 82 NV-------IGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIV---KCQKLT 123
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
V + + RGL Y+HS I+HRD+K N+ ++ + LKI D G+AR +MT
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMT 180
Query: 270 GETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
G T Y APE+ L+ YN+ D++S G + E+ +P D ++R
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 66
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 67 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 119
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 120 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA 175
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 176 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 228
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 229 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+++D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 39/296 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRAS 135
+ +E++ L+ E+ RG YG V R GQ +AVK + V S E R
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR----ATVNSQEQK--RLL 97
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
++++ + +D P F GA ++ I C +++ +
Sbjct: 98 MDLDISM-RTVDCPFTVTFYGALFREGDVWI-----------------CMELMD----TS 135
Query: 196 LKKFL--IRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRTLKI 252
L KF + +K + + ++ +IA+ + + L +LHSK +++HRDVK N+L++A +K+
Sbjct: 136 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 195
Query: 253 ADFGVARVEAQNPRDMTGETGTLGYMAPE----VLDGKPYNRKCDVYSFGICLWEIYCCD 308
DFG++ + T + G YMAPE L+ K Y+ K D++S GI + E+
Sbjct: 196 CDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIPR-CCPSSLASIMRKCWDANPDKRPVMDEVVK 363
PY V + P +P + +C N +RP E+++
Sbjct: 255 FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E++K + +I +GT+G V++ + GQ VA+K ++ E + +E+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-------KVLMENEKEGFPITALREI 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
+ Q L H NV I +I A+ + E+ G L L
Sbjct: 69 KILQLLKHENVVNLI---------EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL 119
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR- 259
++ ++ K V+Q+ L+ GL Y+H I+HRD+K N+L+ + LK+ADFG+AR
Sbjct: 120 VKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 260 ---VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIY 305
+ P TL Y PE+L G + Y D++ G + E++
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 184 CCVVVEYLPGGTLKKFLIRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN 241
+V+EY+ GG + L R R + A QI L YLHS +++RD+K EN
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPEN 171
Query: 242 MLLDANRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSF 297
+L+D +++ DFG A + + G T GT Y+APE++ K YN+ D ++
Sbjct: 172 LLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 298 GICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
G+ ++E+ P+ + +V +R P S L ++R + KR
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++++ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 92 EIARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ +G + V R GQ+ A KI++ T +A +E + + L HP
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIIN-------TKKLSARDHQKLEREARICRLLKHP 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL-KKFLIRNKRKKL 208
N+ + S + + H+ L + + + GG L + + R +
Sbjct: 82 NIVRL-------------HDSISEEGHHYL-------IFDLVTGGELFEDIVAREYYSEA 121
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNP 265
IQ L+ + + H +VHRD+K EN+LL + +K+ADFG+A
Sbjct: 122 DASHCIQQILE---AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ G GT GY++PEVL PY + D+++ G+ L Y + YP F D +
Sbjct: 179 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL---YILLVGYP--PFWDEDQHRLY 233
Query: 326 QNLR--------PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK 363
Q ++ P+ P + ++ K NP KR E +K
Sbjct: 234 QQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKRITAAEALK 278
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 54/311 (17%)
Query: 92 EIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ +G + V R GQ+ A KI++ T +A +E + + L HP
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIIN-------TKKLSARDHQKLEREARICRLLKHP 63
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRNKRKK 207
N+ + H+S+ +V + + GG L + + R +
Sbjct: 64 NIVRL---------------------HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQN 264
IQ L+ +++ H IVHRD+K EN+LL + +K+ADFG+A +E Q
Sbjct: 103 ADASHCIQQILE---SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQG 158
Query: 265 PRDM-TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
+ G GT GY++PEVL PY + D+++ G+ L Y + YP F D
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL---YILLVGYP--PFWDEDQHR 213
Query: 324 VRQNLR--------PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGG 375
+ Q ++ P+ P + ++ K NP KR E +K S
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQRSTVAS 272
Query: 376 MIPEDQAHGCL 386
M+ + CL
Sbjct: 273 MMHRQETVDCL 283
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 63/303 (20%)
Query: 93 IARGTYGTVY--RGAYDGQDVAVK-ILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+ G+YG V R G+ VA+K L+ +D MV + A+R E+ + ++L H
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV---KKIAMR-----EIKLLKQLRHE 84
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + + + H L +E P G L
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFV---DHTILDD------LELFPNG-------------LD 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
++VV + + G+ + HS I+HRD+K EN+L+ + +K+ DFG AR A
Sbjct: 123 YQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 270 GETGTLGYMAPEVLDGK-PYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV---- 324
E T Y APE+L G Y + DV++ G + E++ + +P S D ++
Sbjct: 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG 242
Query: 325 -----RQNL-----------------RPDIPRCCP---SSLASIMRKCWDANPDKRPVMD 359
Q L R + R P + + +KC +PDKRP
Sbjct: 243 NLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCA 302
Query: 360 EVV 362
E++
Sbjct: 303 ELL 305
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 35 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 86 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 125
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDH 184
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 324 V 324
+
Sbjct: 245 L 245
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 238 VIEQLGTP-----CPEFMKKL 253
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 31 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ IG + ++ P+ D + +V+ L L K L K + L+
Sbjct: 82 NI---IGIN---DIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHLS 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D T
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHT 181
Query: 270 G----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T Y APE+ L+ K Y + D++S G L E+ +P + D + ++
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 13/172 (7%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDMTGETGTLGYM 278
+G+ YLH+ ++HRD+K N+ L+ + +KI DFG+A + + +D+ GT Y+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 279 APEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPS 338
APEVL K ++ + D++S G L+ + P+ + S + +++N +PR
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINP 267
Query: 339 SLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIP 390
++++R+ A+P RP + E+ L + TS G P CL P
Sbjct: 268 VASALIRRMLHADPTLRPSVAEL--LTDEFFTS---GYAPMRLPTSCLTVPP 314
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 275 VIEQLGTP-----CPEFMKKL 290
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 117 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 175
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 236 VIEQLGTP-----CPEFMKKL 251
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 31 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ IG + ++ P+ D + +V+ L L K L K + L+
Sbjct: 82 NI---IGIN---DIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHLS 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D T
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHT 181
Query: 270 G----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T Y APE+ L+ K Y + D++S G L E+ +P + D + ++
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 42/276 (15%)
Query: 93 IARGTYGTVY-----RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD 147
+ G YG V+ G G+ A+K+L A T + A R E Q L+
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA-----TIVQKAKTTEHTRTE---RQVLE 113
Query: 148 HPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKK 207
H + F+ L Q+ T ++++Y+ GG L F ++R++
Sbjct: 114 HIRQSPFL------VTLHYAFQTETK----------LHLILDYINGGEL--FTHLSQRER 155
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV----EAQ 263
V ++ L +LH I++RD+K EN+LLD+N + + DFG+++ E +
Sbjct: 156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 264 NPRDMTGETGTLGYMAPEVLDG--KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSS 321
D GT+ YMAP+++ G +++ D +S G+ ++E+ P+ + +
Sbjct: 216 RAYDF---CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
Query: 322 AVVRQNLR--PDIPRCCPSSLASIMRKCWDANPDKR 355
+ R+ L+ P P+ + ++++ +P KR
Sbjct: 273 EISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 238 VIEQLGTP-----CPEFMKKL 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 54/311 (17%)
Query: 92 EIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ +G + V R GQ+ A KI++ T +A +E + + L HP
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIIN-------TKKLSARDHQKLEREARICRLLKHP 63
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTL-KKFLIRNKRKK 207
N+ + H+S+ +V + + GG L + + R +
Sbjct: 64 NIVRL---------------------HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE 102
Query: 208 LAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR---TLKIADFGVARVEAQN 264
IQ L+ +++ H IVHRD+K EN+LL + +K+ADFG+A +E Q
Sbjct: 103 ADASHCIQQILE---SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQG 158
Query: 265 PRDM-TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
+ G GT GY++PEVL PY + D+++ G+ L Y + YP F D
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL---YILLVGYP--PFWDEDQHR 213
Query: 324 VRQNLR--------PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGG 375
+ Q ++ P+ P + ++ K NP KR E +K S
Sbjct: 214 LYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQRSTVAS 272
Query: 376 MIPEDQAHGCL 386
M+ + CL
Sbjct: 273 MMHRQETVDCL 283
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 13/172 (7%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA---RVEAQNPRDMTGETGTLGYM 278
+G+ YLH+ ++HRD+K N+ L+ + +KI DFG+A + + +D+ GT Y+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 279 APEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPS 338
APEVL K ++ + D++S G L+ + P+ + S + +++N +PR
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINP 251
Query: 339 SLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIP 390
++++R+ A+P RP + E+ L + TS G P CL P
Sbjct: 252 VASALIRRMLHADPTLRPSVAEL--LTDEFFTS---GYAPMRLPTSCLTVPP 298
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
+V+ L L K L K + L+ + + RGL Y+HS ++HRD+K N+LL+
Sbjct: 103 IVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 159
Query: 247 NRTLKIADFGVARVEAQNPRDMTG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICL 301
LKI DFG+ARV A D TG T Y APE+ L+ K Y + D++S G L
Sbjct: 160 TXDLKIXDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 302 WEIYCCDMPYPDLSFTDVSSAVV 324
E+ +P + D + ++
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 231 VIEQLGTP-----CPEFMKKL 246
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 169
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 230 VIEQLGTP-----CPEFMKKL 245
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 231 VIEQLGTP-----CPEFMKKL 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
+ +V +R P S L ++R
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLR 270
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 275 VIEQLGTP-----CPEFMKKL 290
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 129/310 (41%), Gaps = 52/310 (16%)
Query: 92 EIARGTYGTVYRGAYDG--QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
E+ +G + V R Q+ A KI++ T +A +E + + L HP
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIIN-------TKKLSARDHQKLEREARICRLLKHP 90
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRAC-CVVVEYLPGGTLKKFLIRNKRKKL 208
N+ + H+S+ +V + + GG L + ++ R+
Sbjct: 91 NIVRL---------------------HDSISEEGFHYLVFDLVTGGELFEDIV--AREYY 127
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNP 265
+ + ++++H IVHRD+K EN+LL + +K+ADFG+A +E Q
Sbjct: 128 SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGE 186
Query: 266 RDM-TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
+ G GT GY++PEVL PY + D+++ G+ L Y + YP F D +
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL---YILLVGYP--PFWDEDQHKL 241
Query: 325 RQNLR--------PDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGM 376
Q ++ P+ P + +++ + NP KR D+ +K S M
Sbjct: 242 YQQIKAGAYDFPSPEWDTVTPEA-KNLINQMLTINPAKRITADQALKHPWVCQRSTVASM 300
Query: 377 IPEDQAHGCL 386
+ + CL
Sbjct: 301 MHRQETVECL 310
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
K + L+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-AD 177
Query: 264 NPRDMTG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
D TG T Y APE+ L+ K Y + D++S G L E+ +P + D
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237
Query: 319 VSSAVV 324
+ ++
Sbjct: 238 QLNHIL 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAP 280
+G+ YLH+ ++HRD+K N+ L+ + +KI DFG+A ++E R GT Y+AP
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAP 211
Query: 281 EVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSL 340
EVL K ++ + D++S G L+ + P+ + S + +++N +PR
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVA 269
Query: 341 ASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCLCFIP 390
++++R+ A+P RP + E+ L + TS G P CL P
Sbjct: 270 SALIRRMLHADPTLRPSVAEL--LTDEFFTS---GYAPMRLPTSCLTVPP 314
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E++K + +I +GT+G V++ + GQ VA+K ++ E + +E+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-------KVLMENEKEGFPITALREI 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
+ Q L H NV I +I A+ + E+ G L L
Sbjct: 69 KILQLLKHENVVNLI---------EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL 119
Query: 201 IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVAR- 259
++ ++ K V+Q+ L+ GL Y+H I+HRD+K N+L+ + LK+ADFG+AR
Sbjct: 120 VKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 260 ---VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIY 305
+ P TL Y PE+L G + Y D++ G + E++
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E++K + +I +GT+G V++ + GQ VA+K ++ E + +E+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-------KVLMENEKEGFPITALREI 68
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVV--VEYLPGGTLKK 198
+ Q L H NV I + +N V E+ G L
Sbjct: 69 KILQLLKHENVVNLIEIC-----------RTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
L++ ++ K V+Q+ L+ GL Y+H I+HRD+K N+L+ + LK+ADFG+A
Sbjct: 118 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 259 R----VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIY 305
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 83 ELAKLDIRHEIARGTYGTVYRGAY--DGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
E++K + +I +GT+G V++ + GQ VA+K ++ E + +E+
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-------KVLMENEKEGFPITALREI 67
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVV--VEYLPGGTLKK 198
+ Q L H NV I + +N V E+ G L
Sbjct: 68 KILQLLKHENVVNLIEIC-----------RTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 116
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
L++ ++ K V+Q+ L+ GL Y+H I+HRD+K N+L+ + LK+ADFG+A
Sbjct: 117 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
Query: 259 R----VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIY 305
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 172 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 35 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 86 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 125
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 184
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 324 V 324
+
Sbjct: 245 L 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 36 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 87 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 126
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 127 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 185
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
Query: 324 V 324
+
Sbjct: 246 L 246
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 193 GGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKI 252
G L F ++ +L + I L + YL K I+HRD+K EN+++ + T+K+
Sbjct: 112 GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKL 171
Query: 253 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPY-NRKCDVYSFGICLWEIYCCDMPY 311
DFG A + T GT+ Y APEVL G PY + +++S G+ L+ + + P+
Sbjct: 172 IDFGSAAYLERGKLFYTF-CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Query: 312 PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
+L T V + P P L S++ P++R ++++V
Sbjct: 231 CELEET------VEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLV 273
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 29 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ IG + ++ P+ D + +V+ L L K L K + L+
Sbjct: 80 NI---IGIN---DIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHLS 120
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D T
Sbjct: 121 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHT 179
Query: 270 G----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T Y APE+ L+ K Y + D++S G L E+ +P + D + ++
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVCREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ HPN+ H+ +R +++E + GG L FL +
Sbjct: 72 VLHPNIITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 45/271 (16%)
Query: 76 KTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD--VAVKILDWAEDGMVTSAEAAAIR 133
K ++ + +I I RG +G V D A+KIL+ E M+ AE A
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRAETAC-- 120
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
FR+E V D +T A NL + V++Y G
Sbjct: 121 --FREERDVLVNGDSKWITTLHYAFQDDNNLYL--------------------VMDYYVG 158
Query: 194 G----TLKKFLIRNKRKKLAFKVV-IQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
G L KF R + F + + IA+D L Y VHRD+K +N+L+D N
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY------VHRDIKPDNILMDMNG 212
Query: 249 TLKIADFG-VARVEAQNPRDMTGETGTLGYMAPEVLDGKP-----YNRKCDVYSFGICLW 302
+++ADFG ++ + GT Y++PE+L Y +CD +S G+C++
Sbjct: 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY 272
Query: 303 EIYCCDMPYPDLSFTDVSSAVVRQNLRPDIP 333
E+ + P+ S + ++ R P
Sbjct: 273 EMLYGETPFYAESLVETYGKIMNHKERFQFP 303
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R GQ AVKI+D A+ TS+ + ++E ++ L HP+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAK---FTSSPGLSTE-DLKREASICHMLKHPH 89
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + + ++ +SD +V E++ G L +++ +
Sbjct: 90 IVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRADAGFVY 129
Query: 211 K--VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNP 265
V + L Y H I+HRDVK +LL + +K+ FGVA ++
Sbjct: 130 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
G GT +MAPEV+ +PY + DV+ G+ L+ + +P+
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 29 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ IG + ++ P+ D + +V+ L L K L K + L+
Sbjct: 80 NI---IGIN---DIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHLS 120
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+ + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D T
Sbjct: 121 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHT 179
Query: 270 G----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVV 324
G T Y APE+ L+ K Y + D++S G L E+ +P + D + ++
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 31 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 82 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 121
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 180
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 324 V 324
+
Sbjct: 241 L 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT Y+AP ++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 33 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 84 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 123
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 124 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 182
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
Query: 324 V 324
+
Sbjct: 243 L 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 36 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 87 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 126
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 127 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 185
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
Query: 324 V 324
+
Sbjct: 246 L 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 37 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 88 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 127
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 128 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 186
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
Query: 324 V 324
+
Sbjct: 247 L 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 28 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 79 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 118
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 119 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 177
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
Query: 324 V 324
+
Sbjct: 238 L 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 35 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 86 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 125
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 184
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 324 V 324
+
Sbjct: 245 L 245
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 238 VIEQLGTP-----CPEFMKKL 253
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 93 IARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPN 150
I +G + V R GQ AVKI+D A+ TS+ + ++E ++ L HP+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAK---FTSSPGLSTE-DLKREASICHMLKHPH 87
Query: 151 VTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + + ++ +SD +V E++ G L +++ +
Sbjct: 88 IVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 211 K--VVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT---LKIADFGVARVEAQNP 265
V + L Y H I+HRDVK +LL + +K+ FGVA ++
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 266 RDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
G GT +MAPEV+ +PY + DV+ G+ L+ + +P+
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 51 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 102 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 141
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 200
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 324 V 324
+
Sbjct: 261 L 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 186 VVVEYLPGGTLKKF------LIRNKRKKLAFKVVIQIALDLARGLSYLHS-KTIVHRDVK 238
++ EY+ ++ KF L +N + +V+ I + SY+H+ K I HRDVK
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 239 TENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGK-PYN-RKCDVYS 296
N+L+D N +K++DFG + E + + G GT +M PE + YN K D++S
Sbjct: 180 PSNILMDKNGRVKLSDFGES--EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 297 FGICLWEIYCCDMPYP-DLSFTDVSSAVVRQNLRPDIPR 334
GICL+ ++ +P+ +S ++ + + +N+ + R
Sbjct: 238 LGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 39 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 90 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 129
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 130 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 188
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
Query: 324 V 324
+
Sbjct: 249 L 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 31 IGEGAYGMVC-SAYDNVNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 82 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KTQHL 121
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 180
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 324 V 324
+
Sbjct: 241 L 241
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQ 326
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 88 DIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
+I I G YG V R GQ VA+K + A D +VT+A+ +E+ + +
Sbjct: 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTL------RELKILKH 109
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
H N+ + ++ P+ ++ VV++ + + I +
Sbjct: 110 FKHDNI-------IAIKDILRPTVPYGE-------FKSVYVVLDLMESDLHQ---IIHSS 152
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNP 265
+ L + V L RGL Y+HS ++HRD+K N+L++ N LKI DFG+AR +P
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Query: 266 RD----MTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVS 320
+ MT T Y APE+ L Y + D++S G E+ +P ++
Sbjct: 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 272
Query: 321 SAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++ P P + A +R + P ++PV E V
Sbjct: 273 QLIMMVLGTPS-PAVIQAVGAERVRAYIQSLPPRQPVPWETV 313
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV--- 260
K ++L+ + + RGL Y+HS ++HRD+K N+L++ LKI DFG+AR+
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADP 196
Query: 261 EAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
E + +T T Y APE+ L+ K Y + D++S G L E+ +P + D
Sbjct: 197 EHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
+V+ L L K L K + L+ + + RGL Y+HS ++HRD+K N+LL+
Sbjct: 105 IVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 161
Query: 247 NRTLKIADFGVARVEAQNPRDMTG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICL 301
LKI DFG+ARV A D TG T Y APE+ L+ K Y + D++S G L
Sbjct: 162 TCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
Query: 302 WEIYCCDMPYPDLSFTDVSSAVV 324
E+ +P + D + ++
Sbjct: 221 AEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 187 VVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA 246
+V+ L L K L K + L+ + + RGL Y+HS ++HRD+K N+LL+
Sbjct: 107 IVQDLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 163
Query: 247 NRTLKIADFGVARVEAQNPRDMTG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICL 301
LKI DFG+ARV A D TG T Y APE+ L+ K Y + D++S G L
Sbjct: 164 TCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 302 WEIYCCDMPYPDLSFTDVSSAVV 324
E+ +P + D + ++
Sbjct: 223 AEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 86 KLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVW 143
+ +I I G YG V R GQ VA+K + A D +VT+A+ +E+ +
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTL------RELKIL 108
Query: 144 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRN 203
+ H N+ + ++ P+ ++ VV++ + + I +
Sbjct: 109 KHFKHDNI-------IAIKDILRPTVPYGE-------FKSVYVVLDLMESDLHQ---IIH 151
Query: 204 KRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQ 263
+ L + V L RGL Y+HS ++HRD+K N+L++ N LKI DFG+AR
Sbjct: 152 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 211
Query: 264 NPRD----MTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTD 318
+P + MT T Y APE+ L Y + D++S G E+ +P ++
Sbjct: 212 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 271
Query: 319 VSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVV 362
++ P P + A +R + P ++PV E V
Sbjct: 272 QLQLIMMVLGTPS-PAVIQAVGAERVRAYIQSLPPRQPVPWETV 314
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 84 LAKLDIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
L DI E+ G +G V+R G + A K + +T E+ + + R+E+
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-------MTPHESD--KETVRKEIQ 206
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
L HP + A D + ++ E++ GG L + +
Sbjct: 207 TMSVLRHPTLVNL--------------HDAFEDDNE------MVMIYEFMSGGELFE-KV 245
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFGV-A 258
++ K++ ++ + +GL ++H VH D+K EN++ R+ LK+ DFG+ A
Sbjct: 246 ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
++ + +T TGT + APEV +GKP D++S G+ + + P+
Sbjct: 306 HLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 84 LAKLDIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
L DI E+ G +G V+R G + A K + +T E+ + + R+E+
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-------MTPHESD--KETVRKEIQ 100
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
L HP + A D + ++ E++ GG L + +
Sbjct: 101 TMSVLRHPTLVNL--------------HDAFEDDNE------MVMIYEFMSGGELFE-KV 139
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRT--LKIADFGV-A 258
++ K++ ++ + +GL ++H VH D+K EN++ R+ LK+ DFG+ A
Sbjct: 140 ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 259 RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
++ + +T TGT + APEV +GKP D++S G+ + + P+
Sbjct: 200 HLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 93 IARGTYGTVYRGAYDGQD---VAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
I G YG V AYD + VA+K ++ E +E+ + + H
Sbjct: 35 IGEGAYGMVC-SAYDNLNKVRVAIK--------KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 150 NVTKFIGASMGTTNL-KIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKL 208
N+ +G ++ + P+ D + +V+ L L K L K + L
Sbjct: 86 NI-------IGINDIIRAPTIEQMKDVY----------IVQDLMETDLYKLL---KCQHL 125
Query: 209 AFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM 268
+ + + RGL Y+HS ++HRD+K N+LL+ LKI DFG+ARV A D
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDH 184
Query: 269 TG----ETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAV 323
TG T Y APE+ L+ K Y + D++S G L E+ +P + D + +
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 324 V 324
+
Sbjct: 245 L 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 93 IARGTYGTVYRGAYDG--QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD-HP 149
+ RG V R + ++ AVKI+D G ++ E +R + +EV + +K+ HP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + D++ + + +V + + G L +L ++ L+
Sbjct: 85 NIIQL------------------KDTYET--NTFFFLVFDLMKKGELFDYL--TEKVTLS 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
K +I L + LH IVHRD+K EN+LLD + +K+ DFG + + +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLR 181
Query: 270 GETGTLGYMAPEVL-----DGKP-YNRKCDVYSFGICLWEIYCCDMPY 311
GT Y+APE++ D P Y ++ D++S G+ ++ + P+
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 81 EIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQ 138
E++ L+ E+ RG YG V R GQ +AVK + V S E R
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR----ATVNSQEQK--RLLMDL 56
Query: 139 EVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKK 198
++++ + +D P F GA ++ I C +++ +L K
Sbjct: 57 DISM-RTVDCPFTVTFYGALFREGDVWI-----------------CMELMD----TSLDK 94
Query: 199 FL--IRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRTLKIADF 255
F + +K + + ++ +IA+ + + L +LHSK +++HRDVK N+L++A +K+ DF
Sbjct: 95 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF 154
Query: 256 GVARVEAQN-PRDMTGETGTLGYMAPE----VLDGKPYNRKCDVYSFGICLWEIYCCDMP 310
G++ + +D+ + G YMAPE L+ K Y+ K D++S GI + E+ P
Sbjct: 155 GISGYLVDDVAKDI--DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
Query: 311 YPDLSFTDVSSAVVRQNLRPDIPR-CCPSSLASIMRKCWDANPDKRPVMDEVVK 363
Y V + P +P + +C N +RP E+++
Sbjct: 213 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 83 ELAKLDIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEV 140
+L + D + G++G V + G A+KILD +Q+V
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-------------------KQKV 79
Query: 141 AVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL 200
++++H K I ++ L + + + D+ N +V+EY+ GG + L
Sbjct: 80 VKLKQIEHTLNEKRILQAVNFPFL-VKLEFSFKDNSN------LYMVMEYVAGGEMFSHL 132
Query: 201 IRNKR--KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA 258
R R + A QI L YLHS +++RD+K EN+L+D +++ DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTF----EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Query: 259 RVEAQNPRDMTGET----GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDL 314
+ + G T GT +APE++ K YN+ D ++ G+ ++E+ P+
Sbjct: 189 -------KRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 315 SFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
+ +V +R P S L ++R + KR
Sbjct: 242 QPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F+QE+ + + LDHPN+ + T++ + V+E GG
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYL--------------------VMELCTGGE 92
Query: 196 LKKFLIRNKRKKLAFKV--VIQIALDLARGLSYLHSKTIVHRDVKTENMLL---DANRTL 250
L + ++ + F+ +I D+ ++Y H + HRD+K EN L + L
Sbjct: 93 LFERVVHKR----VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 148
Query: 251 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 310
K+ DFG+A + + M + GT Y++P+VL+G Y +CD +S G+ ++ + C P
Sbjct: 149 KLIDFGLA-ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 206
Query: 311 Y 311
+
Sbjct: 207 F 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
F+QE+ + + LDHPN+ + T++ + V+E GG
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYL--------------------VMELCTGGE 109
Query: 196 LKKFLIRNKRKKLAFKV--VIQIALDLARGLSYLHSKTIVHRDVKTENMLL---DANRTL 250
L + ++ K F+ +I D+ ++Y H + HRD+K EN L + L
Sbjct: 110 LFERVVH----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 165
Query: 251 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 310
K+ DFG+A + + M + GT Y++P+VL+G Y +CD +S G+ ++ + C P
Sbjct: 166 KLIDFGLA-ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 223
Query: 311 Y 311
+
Sbjct: 224 F 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 93 IARGTYGTVYRGAYDG--QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD-HP 149
+ RG V R + ++ AVKI+D G ++ E +R + +EV + +K+ HP
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + D++ + + +V + + G L +L ++ L+
Sbjct: 72 NIIQL------------------KDTYET--NTFFFLVFDLMKKGELFDYL--TEKVTLS 109
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
K +I L + LH IVHRD+K EN+LLD + +K+ DFG + +P +
Sbjct: 110 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKL 167
Query: 270 GET-GTLGYMAPEVL-----DGKP-YNRKCDVYSFGICLWEIYCCDMPY 311
E GT Y+APE++ D P Y ++ D++S G+ ++ + P+
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML-L 244
VV E + GG L ++R +K + + + + + + YLH++ +VHRD+K N+L +
Sbjct: 93 VVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 245 DAN---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D + +++I DFG A+ + A+N MT T ++APEVL+ + Y+ CD++S G+
Sbjct: 151 DESGNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLERQGYDAACDIWSLGVL 209
Query: 301 LWEIYCCDMPYPD 313
L+ + P+ +
Sbjct: 210 LYTMLTGYTPFAN 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 93 IARGTYGTVYRGAYDG--QDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLD-HP 149
+ RG V R + ++ AVKI+D G ++ E +R + +EV + +K+ HP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + D++ + + +V + + G L +L ++ L+
Sbjct: 85 NIIQL------------------KDTYET--NTFFFLVFDLMKKGELFDYL--TEKVTLS 122
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
K +I L + LH IVHRD+K EN+LLD + +K+ DFG + +P +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKL 180
Query: 270 GET-GTLGYMAPEVL-----DGKP-YNRKCDVYSFGICLWEIYCCDMPY 311
E GT Y+APE++ D P Y ++ D++S G+ ++ + P+
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 125/303 (41%), Gaps = 57/303 (18%)
Query: 75 RKTEEWEIELAKLDIRHEIARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAI 132
R TEE+++ E+ +G + V R GQ+ A I++ T +A
Sbjct: 8 RFTEEYQL-------FEELGKGAFSVVRRCVKVLAGQEYAAMIIN-------TKKLSARD 53
Query: 133 RASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLP 192
+E + + L HPN+ + S + + H+ L + + +
Sbjct: 54 HQKLEREARICRLLKHPNIVRL-------------HDSISEEGHHYL-------IFDLVT 93
Query: 193 GGTL-KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDA---NR 248
GG L + + R + IQ L+ + + H +VHR++K EN+LL +
Sbjct: 94 GGELFEDIVAREYYSEADASHCIQQILE---AVLHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 249 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD 308
+K+ADFG+A + G GT GY++PEVL PY + D+++ G+ L Y
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL---YILL 207
Query: 309 MPYPDLSFTDVSSAVVRQNLR--------PDIPRCCPSSLASIMRKCWDANPDKRPVMDE 360
+ YP F D + Q ++ P+ P + ++ K NP KR E
Sbjct: 208 VGYP--PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKRITAAE 264
Query: 361 VVK 363
+K
Sbjct: 265 ALK 267
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 60/264 (22%)
Query: 73 LPRKTEEWEIELAKLDIRHEIARGTYGTVYRGAYDGQD---VAVK-ILDWAEDGMVTSAE 128
+PR +W+I + +IRH I G+YG V AYD + VA+K IL ED +
Sbjct: 42 MPRPHSDWQIP-DRYEIRHLIGTGSYGHVCE-AYDKLEKRVVAIKKILRVFEDLIDCK-- 97
Query: 129 AAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVV 188
+E+A+ +L+H +V K + ++ IP D VV+
Sbjct: 98 ------RILREIAILNRLNHDHVVKVL-------DIVIPKDVEKFDE--------LYVVL 136
Query: 189 EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR 248
E K F +L K ++ +L G+ Y+HS I+HRD+K N L++ +
Sbjct: 137 EIADSDFKKLFRTPVYLTELHIKTLL---YNLLVGVKYVHSAGILHRDLKPANCLVNQDC 193
Query: 249 TLKIADFGVARV-------EAQNP--------------------RDMTGETGTLGYMAPE 281
++K+ DFG+AR +Q P R +TG T Y APE
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253
Query: 282 -VLDGKPYNRKCDVYSFGICLWEI 304
+L + Y DV+S G E+
Sbjct: 254 LILLQENYTEAIDVWSIGCIFAEL 277
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VIQ+ LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR A
Sbjct: 120 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 178
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSA 322
M T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 323 VVRQNLRPDIPRCCPSSLASI 343
V+ Q P CP + +
Sbjct: 239 VIEQLGTP-----CPEFMKKL 254
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
+++EY GG + + + ++ VI++ + G+ YLH IVH D+K +N+LL
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 246 ANRTL---KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLW 302
+ L KI DFG++R + + ++ GT Y+APE+L+ P D+++ GI +
Sbjct: 166 SIYPLGDIKIVDFGMSR-KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAY 224
Query: 303 EIYCCDMPY--PDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMD 359
+ P+ D T ++ + V + + ++ NP+KRP +
Sbjct: 225 MLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVSREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ H NV H+ +R +++E + GG L FL +
Sbjct: 72 VLHHNVITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDAN---RTLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D E+ G + V R G A K + + S+ R +EV++ ++
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFI---KKRRTKSSRRGVSREDIEREVSILKE 70
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
+ HPNV T++ +++E + GG L FL ++
Sbjct: 71 IQHPNVITLHEVYENKTDV--------------------ILILELVAGGELFDFLA--EK 108
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RV 260
+ L + + + G+ YLHS I H D+K EN MLLD N +KI DFG+A ++
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 169 DFGN--EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRTLKI 252
GT + L + + + +++ ++ + + + L YL K ++HRDVK N+LLD +K+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 253 ADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLD----GKP-YNRKCDVYSFGICLWEIYC 306
DFG++ R+ +D + G YMAPE +D KP Y+ + DV+S GI L E+
Sbjct: 167 CDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSS--LASIMRKCWDANPDKRPVMDEVVKL 364
PY + V Q P +P S S ++ C + KRP + KL
Sbjct: 225 GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN---KL 281
Query: 365 LE 366
LE
Sbjct: 282 LE 283
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 186 VVVEYLPGGTLKKFLIRNK---RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
+V E + GG L ++R K ++ +F + + + + YLHS+ +VHRD+K N+
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 243 L-LDAN---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSF 297
L +D + L+I DFG A+ + A+N MT T ++APEVL + Y+ CD++S
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSL 211
Query: 298 GICLWEIYCCDMPYPD 313
GI L+ + P+ +
Sbjct: 212 GILLYTMLAGYTPFAN 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VI + LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR +
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
N MT T Y APEV+ G Y D++S G + E+
Sbjct: 176 TNFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVSREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ H NV H+ +R +++E + GG L FL +
Sbjct: 72 VLHHNVITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 186 VVVEYLPGGTLKKFLIRNK---RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENM 242
+V E + GG L ++R K ++ +F + + + + YLHS+ +VHRD+K N+
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 243 L-LDAN---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSF 297
L +D + L+I DFG A+ + A+N MT T ++APEVL + Y+ CD++S
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSL 211
Query: 298 GICLWEIYCCDMPYPD 313
GI L+ + P+ +
Sbjct: 212 GILLYTMLAGYTPFAN 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVSREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ H NV H+ +R +++E + GG L FL +
Sbjct: 72 VLHHNVITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 35/265 (13%)
Query: 77 TEEWEIELAKLDIRHEIARGTYG--TVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA 134
+E ++ +I I RG +G V + + A+KIL+ E M+ AE A
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--MLKRAETAC--- 136
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
FR+E V D +T A +L + V++Y GG
Sbjct: 137 -FREERDVLVNGDCQWITALHYAFQDENHLYL--------------------VMDYYVGG 175
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L L + + K I ++ + +H VHRD+K +N+LLD N +++AD
Sbjct: 176 DLLTLLSKFEDKLPEDMARFYIG-EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD 234
Query: 255 FG-VARVEAQNPRDMTGETGTLGYMAPEVL----DGK-PYNRKCDVYSFGICLWEIYCCD 308
FG ++ + GT Y++PE+L DG Y +CD +S G+C++E+ +
Sbjct: 235 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIP 333
P+ S + ++ R P
Sbjct: 295 TPFYAESLVETYGKIMNHEERFQFP 319
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVSREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ H NV H+ +R +++E + GG L FL +
Sbjct: 72 VLHHNVITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 224 LSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 282
+ + HS+ +VHRD+K EN+L+D R K+ DFG + P T GT Y PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPEW 209
Query: 283 LDGKPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLA 341
+ Y+ V+S GI L+++ C D+P+ + ++ PD CC
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPD---CC----- 261
Query: 342 SIMRKCWDANPDKRPVMDEVVKLLE----------AVNTSKGG 374
+++R+C P RP ++E+ LL+ +N SKGG
Sbjct: 262 ALIRRCLAPKPSSRPSLEEI--LLDPWMQTPAEDVPLNPSKGG 302
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET--GTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K ++ D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 33/246 (13%)
Query: 92 EIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHP 149
+I G+YG V+ R GQ VA+K +ED V A +E+ + ++L HP
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL-------REIRMLKQLKHP 62
Query: 150 NVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLA 209
N+ + L + V EY L + + ++ +
Sbjct: 63 NLVNLLEVFRRKRRLHL--------------------VFEYCDHTVLHE--LDRYQRGVP 100
Query: 210 FKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMT 269
+V I + +++ H +HRDVK EN+L+ + +K+ DFG AR+
Sbjct: 101 EHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160
Query: 270 GETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNL 328
E T Y +PE+L G Y DV++ G E+ +P S D ++R+ L
Sbjct: 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTL 219
Query: 329 RPDIPR 334
IPR
Sbjct: 220 GDLIPR 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 35/265 (13%)
Query: 77 TEEWEIELAKLDIRHEIARGTYG--TVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRA 134
+E ++ +I I RG +G V + + A+KIL+ E M+ AE A
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--MLKRAETAC--- 120
Query: 135 SFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGG 194
FR+E V D +T A +L + V++Y GG
Sbjct: 121 -FREERDVLVNGDCQWITALHYAFQDENHLYL--------------------VMDYYVGG 159
Query: 195 TLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIAD 254
L L + + K I ++ + +H VHRD+K +N+LLD N +++AD
Sbjct: 160 DLLTLLSKFEDKLPEDMARFYIG-EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLAD 218
Query: 255 FG-VARVEAQNPRDMTGETGTLGYMAPEVL----DGK-PYNRKCDVYSFGICLWEIYCCD 308
FG ++ + GT Y++PE+L DG Y +CD +S G+C++E+ +
Sbjct: 219 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
Query: 309 MPYPDLSFTDVSSAVVRQNLRPDIP 333
P+ S + ++ R P
Sbjct: 279 TPFYAESLVETYGKIMNHEERFQFP 303
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G + V R G + A K + + ++ R +EV++ ++
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQS---RASRRGVSREEIEREVSILRQ 71
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRA-CCVVVEYLPGGTLKKFLIRNK 204
+ H NV H+ +R +++E + GG L FL +
Sbjct: 72 VLHHNVITL---------------------HDVYENRTDVVLILELVSGGELFDFL--AQ 108
Query: 205 RKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVARV 260
++ L+ + + G++YLH+K I H D+K EN MLLD N +K+ DFG+A
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH- 167
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
E ++ + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 89
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 90 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 206 TYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 89
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 90 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 206 TYILLSGASPF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D E+ G + V R G A K + + S+ R +EV++ ++
Sbjct: 14 DTGEELGSGVFAVVKKCREKSTGLQYAAKFI---KKRRTKSSRRGVSREDIEREVSILKE 70
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
+ HPNV T+ +++E + GG L FL ++
Sbjct: 71 IQHPNVITLHEVYENKTD--------------------VILILELVAGGELFDFLA--EK 108
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RV 260
+ L + + + G+ YLHS I H D+K EN MLLD N +KI DFG+A ++
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 169 DFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 88 DIRHEIARGTYGTVY--RGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
D E+ G + V R G A K + + S+ R +EV++ ++
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFI---KKRRTKSSRRGVSREDIEREVSILKE 70
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
+ HPNV T++ +++E + GG L FL ++
Sbjct: 71 IQHPNVITLHEVYENKTDV--------------------ILILELVAGGELFDFLA--EK 108
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLLDANR---TLKIADFGVA-RV 260
+ L + + + G+ YLHS I H D+K EN MLLD N +KI DFG+A ++
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 261 EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
+ N + GT ++APE+++ +P + D++S G+ + + P+
Sbjct: 169 DFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
WE+ + H + G YG+V G+ VA+K L +E A RA
Sbjct: 20 WELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRAY-- 71
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E+ + + + H NV +G ++ P+ S + L V+ ++ K
Sbjct: 72 RELLLLKHMQHENV-------IGLLDVFTPASSLRNFYDFYL-------VMPFMQTDLQK 117
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
++ +K+ + + + +GL Y+HS +VHRD+K N+ ++ + LKI DFG+
Sbjct: 118 IMGLKFSEEKIQY-----LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL 172
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
AR +MTG T Y APEV L YN+ D++S G + E+ + +
Sbjct: 173 AR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
Query: 317 TDVSSAVVR 325
D + +++
Sbjct: 230 LDQLTQILK 238
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV T+
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--------------------VI 90
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-MLL 244
+++E + GG L FL +++ L + + + G+ YLHS I H D+K EN MLL
Sbjct: 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 245 DANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Query: 301 LWEIYCCDMPY 311
+ + P+
Sbjct: 207 TYILLSGASPF 217
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 78 EEWEIELAKLDIRHEIARGTYGTV--YRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRAS 135
E +E++ L+ E+ RG YG V R GQ AVK + V S E +
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR----ATVNSQEQKRLLXD 82
Query: 136 FRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGT 195
+ +D P F GA ++ I + L +
Sbjct: 83 LDISX---RTVDCPFTVTFYGALFREGDVWICXE---------------------LXDTS 118
Query: 196 LKKFL--IRNKRKKLAFKVVIQIALDLARGLSYLHSK-TIVHRDVKTENMLLDANRTLKI 252
L KF + +K + + ++ +IA+ + + L +LHSK +++HRDVK N+L++A +K
Sbjct: 119 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKX 178
Query: 253 ADFGVARVEAQN-PRDMTGETGTLGYMAPE----VLDGKPYNRKCDVYSFGICLWEIYCC 307
DFG++ + +D+ + G Y APE L+ K Y+ K D++S GI E+
Sbjct: 179 CDFGISGYLVDDVAKDI--DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAIL 236
Query: 308 DMPYPDLSFTDVSSAVVRQNLRPDIPR-CCPSSLASIMRKCWDANPDKRPVMDEVVK 363
PY V + P +P + +C N +RP E+ +
Sbjct: 237 RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 87 LDIRHEIARGTYGTVYRGAYD-----GQ----DVAVKILDWAEDGMVTSAEAAAIRASFR 137
L + +GT+ +++G GQ +V +K+LD A SF
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY---------SESFF 60
Query: 138 QEVAVWQKLDHPNVTKFIGASM-GTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ ++ KL H ++ G + G N+ +V E++ G+L
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCVCGDENI---------------------LVQEFVKFGSL 99
Query: 197 KKFLIRNKR-KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL--DANRT---- 249
+L +NK + +K +++A LA + +L T++H +V +N+LL + +R
Sbjct: 100 DTYLKKNKNCINILWK--LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNP 157
Query: 250 --LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYC 306
+K++D G++ P+D+ E + ++ PE ++ K N D +SFG LWEI
Sbjct: 158 PFIKLSDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI-- 211
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
C LS D + R +P + LA+++ C D PD RP +++ L
Sbjct: 212 CSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 367 AVNT 370
++ T
Sbjct: 272 SLFT 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET--GTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + + GT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV---EAQNPRDMTGETGTL 275
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V E++ R GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGTA 196
Query: 276 GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 33/249 (13%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRG--AYDGQDVAVKILDWAEDGMVTSAEAAAIRASFR 137
WE+ + H + G YG+V G+ VA+K L +E A RA
Sbjct: 38 WELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-----FQSEIFAKRAY-- 89
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLK 197
+E+ + + + H NV +G ++ P+ S + L V+ ++ K
Sbjct: 90 RELLLLKHMQHENV-------IGLLDVFTPASSLRNFYDFYL-------VMPFMQTDLQK 135
Query: 198 KFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGV 257
+ +K+ + + + +GL Y+HS +VHRD+K N+ ++ + LKI DFG+
Sbjct: 136 IMGMEFSEEKIQY-----LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL 190
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 316
AR +MTG T Y APEV L YN+ D++S G + E+ + +
Sbjct: 191 AR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247
Query: 317 TDVSSAVVR 325
D + +++
Sbjct: 248 LDQLTQILK 256
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 213 VIQIALDLAR----------GLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEA 262
VI + LD R G+ +LHS I+HRD+K N+++ ++ TLKI DFG+AR
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 263 QNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
N MT T Y APEV+ G Y D++S G + E+
Sbjct: 178 TNFM-MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 126 SAEAAAIRASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACC 185
S+ R +EV++ +++ HPNV H ++
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITL---------------------HEVYENKTDV 89
Query: 186 VVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTEN-ML 243
+++ E + GG L FL +++ L + + + G+ YLHS I H D+K EN ML
Sbjct: 90 ILIGELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
Query: 244 LDANR---TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGI 299
LD N +KI DFG+A +++ N + GT ++APE+++ +P + D++S G+
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 300 CLWEIYCCDMPY 311
+ + P+
Sbjct: 206 ITYILLSGASPF 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 87 LDIRHEIARGTYGTVYRGAYD-----GQ----DVAVKILDWAEDGMVTSAEAAAIRASFR 137
L + +GT+ +++G GQ +V +K+LD A SF
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY---------SESFF 60
Query: 138 QEVAVWQKLDHPNVTKFIGASM-GTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+ ++ KL H ++ G G N+ +V E++ G+L
Sbjct: 61 EAASMMSKLSHKHLVLNYGVCFCGDENI---------------------LVQEFVKFGSL 99
Query: 197 KKFLIRNKR-KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL--DANRT---- 249
+L +NK + +K +++A LA + +L T++H +V +N+LL + +R
Sbjct: 100 DTYLKKNKNCINILWK--LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNP 157
Query: 250 --LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYC 306
+K++D G++ P+D+ E + ++ PE ++ K N D +SFG LWEI
Sbjct: 158 PFIKLSDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI-- 211
Query: 307 CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE 366
C LS D + R +P + LA+++ C D PD RP +++ L
Sbjct: 212 CSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 367 AVNT 370
++ T
Sbjct: 272 SLFT 275
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET--GTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + + GT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 80 WEIELAKLDIRHEIARGTYGTVYRGAYDGQ---DVAVKILDWAEDGMVTSAEAAAIRASF 136
WE+ D++ + G YG V A DG+ VA+K L +E A RA
Sbjct: 21 WEVRAVYRDLQ-PVGSGAYGAVC-SAVDGRTGAKVAIKKLYRP-----FQSELFAKRAY- 72
Query: 137 RQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTL 196
+E+ + + + H NV +G ++ P + T D +V+ ++ G L
Sbjct: 73 -RELRLLKHMRHENV-------IGLLDVFTPDE--TLDDFTDF-----YLVMPFM-GTDL 116
Query: 197 KKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFG 256
K + K +KL + + + +GL Y+H+ I+HRD+K N+ ++ + LKI DFG
Sbjct: 117 GKLM---KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG 173
Query: 257 VARVEAQNPRDMTGETGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEI 304
+AR Q +M G T Y APEV L+ Y + D++S G + E+
Sbjct: 174 LAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE--TGTLG 276
++ L YLH K I+HRD+K EN+LL+ + ++I DFG A+V + + GT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 277 YMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
+V E L GG++ + K+K + ++ D+A L +LH+K I HRD+K EN+L +
Sbjct: 88 LVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCE 145
Query: 246 ANRT---LKIADFGVARVEAQNPR-------DMTGETGTLGYMAPEVLD-----GKPYNR 290
+ +KI DF + N ++T G+ YMAPEV++ Y++
Sbjct: 146 SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDK 205
Query: 291 KCDVYSFGICLW 302
+CD++S G+ L+
Sbjct: 206 RCDLWSLGVVLY 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 219 DLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYM 278
D L++LHS+ +VH DVK N+ L K+ DFG+ VE + G YM
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYM 223
Query: 279 APEVLDGKPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFTDVSSAVVRQNLRPDIPRCCP 337
APE+L G Y DV+S G+ + E+ C ++P+ + + L P+
Sbjct: 224 APELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LPPEFTAGLS 278
Query: 338 SSLASIMRKCWDANPDKRPVMDEVVKL 364
S L S++ + +P R + ++ L
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLAL 305
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 21/134 (15%)
Query: 186 VVVEYLPGGTLKKFLIRNKR-KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
+V E + GG++ + + + +L VV+Q D+A L +LH+K I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 245 DANRT---LKIADFGVARVEAQN--------PRDMTGETGTLGYMAPEVL-----DGKPY 288
+ +KI DFG+ N P +T G+ YMAPEV+ + Y
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 289 NRKCDVYSFGICLW 302
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 134 ASFRQEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPG 193
A+ ++E+ + ++L H NV + + K+ +V+EY
Sbjct: 51 ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM------------------YMVMEYCVC 92
Query: 194 GTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIA 253
G +++ L K+ L GL YLHS+ IVH+D+K N+LL TLKI+
Sbjct: 93 G-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151
Query: 254 DFGVARVEAQNPRDMTGET--GTLGYMAPEVLDG--KPYNRKCDVYSFGICLWEIYCCDM 309
GVA D T T G+ + PE+ +G K D++S G+ L+ I
Sbjct: 152 ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211
Query: 310 PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKR 355
P+ + + + + + IP C L+ +++ + P KR
Sbjct: 212 PFEGDNIYKLFENIGKGSYA--IPGDCGPPLSDLLKGMLEYEPAKR 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENML-L 244
VV E GG L ++R +K + + + + + + YLH++ +VHRD+K N+L +
Sbjct: 93 VVTELXKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 245 DAN---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGIC 300
D + +++I DFG A+ + A+N T T ++APEVL+ + Y+ CD++S G+
Sbjct: 151 DESGNPESIRICDFGFAKQLRAENGLLXT-PCYTANFVAPEVLERQGYDAACDIWSLGVL 209
Query: 301 LWEIYCCDMPYPD 313
L+ P+ +
Sbjct: 210 LYTXLTGYTPFAN 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 44/295 (14%)
Query: 97 TYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVTKFIG 156
+Y + G +DG A+K + E R ++E + + +HPN+ + +
Sbjct: 43 SYVDLVEGLHDGHFYALKRILCHEQ---------QDREEAQREADMHRLFNHPNILRLVA 93
Query: 157 ASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFL--IRNKRKKLAFKVVI 214
+ K +++ + GTL + +++K L ++
Sbjct: 94 YCLRERGAK----------------HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQIL 137
Query: 215 QIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV---------EAQNP 265
+ L + RGL +H+K HRD+K N+LL + D G +A
Sbjct: 138 WLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 266 RDMTGETGTLGYMAPEVLDGKPY---NRKCDVYSFGICLWEIYCCDMPYPDLSFT---DV 319
+D + T+ Y APE+ + + + + DV+S G L+ + + PY D+ F V
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-DMVFQKGDSV 256
Query: 320 SSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGG 374
+ AV Q P PR S+L ++ +P +RP + ++ LEA+ G
Sbjct: 257 ALAVQNQLSIPQSPRHS-SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 217 ALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTL 275
A ++ GL ++H++ +V+RD+K N+LLD + ++I+D G+A + P GT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 353
Query: 276 GYMAPEVLD-GKPYNRKCDVYSFGICLWEIYCCDMPY 311
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 217 ALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTL 275
A ++ GL ++H++ +V+RD+K N+LLD + ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 276 GYMAPEVLD-GKPYNRKCDVYSFGICLWEIYCCDMPY 311
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 217 ALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTL 275
A ++ GL ++H++ +V+RD+K N+LLD + ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 276 GYMAPEVLD-GKPYNRKCDVYSFGICLWEIYCCDMPY 311
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 217 ALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVA-RVEAQNPRDMTGETGTL 275
A ++ GL ++H++ +V+RD+K N+LLD + ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 276 GYMAPEVLD-GKPYNRKCDVYSFGICLWEIYCCDMPY 311
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD----------MTGE 271
R + LH ++HRD+K N+L+++N LK+ DFG+AR+ ++ D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 272 TGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIY 305
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRD----------MTGE 271
R + LH ++HRD+K N+L+++N LK+ DFG+AR+ ++ D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 272 TGTLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIY 305
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 226 YLHSKTIVHRDVKTENMLLDA---NRTLKIADFGVARVEAQNPRDM-TGETGTLGYMAPE 281
+ H +VHRD+K EN+LL + +K+ADFG+A +E Q + G GT GY++PE
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 282 VLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLR--------PDIP 333
VL + Y + D+++ G+ L Y + YP F D + Q ++ P+
Sbjct: 177 VLRKEAYGKPVDIWACGVIL---YILLVGYP--PFWDEDQHKLYQQIKAGAYDFPSPEWD 231
Query: 334 RCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTSKGGGMIPEDQAHGCL 386
P + +++ + NP KR E +K S M+ + CL
Sbjct: 232 TVTPEA-KNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECL 283
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 222 RGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG-------- 273
R + LH ++HRD+K N+L+++N LK+ DFG+AR+ ++ D + TG
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 274 --TLGYMAPEV-LDGKPYNRKCDVYSFGICLWEIY 305
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 22/172 (12%)
Query: 186 VVVEYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLD 245
+V+EY+ G +LK R+K +KL I L++ LSYLHS +V+ D+K EN++L
Sbjct: 161 IVMEYVGGQSLK----RSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
Query: 246 ANRTLKIADFG-VARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 304
+ LK+ D G V+R+ + GT G+ APE++ P D+Y+ G L +
Sbjct: 217 EEQ-LKLIDLGAVSRINS-----FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
Query: 305 YCCDMPYPDLSFTDVSSAVVRQNLRPDIPRC-CPSSLASIMRKCWDANPDKR 355
D+P + + D L D P S ++R+ D +P +R
Sbjct: 270 -TLDLPTRNGRYVD--------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQR 312
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 88 DIRHEIARGTYGTVYR--GAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQK 145
DI E+ G +G V+R G+ K ++ + + + E+++ +
Sbjct: 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFIN---------TPYPLDKYTVKNEISIMNQ 104
Query: 146 LDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKR 205
L HP + I A D + +++E+L GG L I +
Sbjct: 105 LHHPKL--------------INLHDAFEDKYE------MVLILEFLSGGELFD-RIAAED 143
Query: 206 KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR--TLKIADFGVARVEAQ 263
K++ VI GL ++H +IVH D+K EN++ + + ++KI DFG+A
Sbjct: 144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT--KL 201
Query: 264 NPRDMTG-ETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPY 311
NP ++ T T + APE++D +P D+++ G+ + + P+
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + +A +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPATVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 186
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 238
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 239 IRWCLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGV 257
F +R L ++ + + + H+ ++HRD+K EN+L+D NR LK+ DFG
Sbjct: 103 FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 162
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ T GT Y PE + Y+ R V+S GI L+++ C D+P+
Sbjct: 163 GALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
RQ + S ++R C P RP +E+
Sbjct: 221 IIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGV 257
F +R L ++ + + + H+ ++HRD+K EN+L+D NR LK+ DFG
Sbjct: 118 FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 177
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ T GT Y PE + Y+ R V+S GI L+++ C D+P+
Sbjct: 178 GALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
RQ + S ++R C P RP +E+
Sbjct: 236 IIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 214
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 266
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 187
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 239
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 240 IRWCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 186
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 238
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 239 IRWCLALRPSDRPTFEEI 256
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPE 281
+ + H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 179
Query: 282 VLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSL 340
+ Y+ R V+S GI L+++ C D+P+ RQ + S
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SEC 231
Query: 341 ASIMRKCWDANPDKRPVMDEV 361
++R C P RP +E+
Sbjct: 232 QHLIRWCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPE 281
+ + H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 182
Query: 282 VLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSL 340
+ Y+ R V+S GI L+++ C D+P+ RQ + S
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SEC 234
Query: 341 ASIMRKCWDANPDKRPVMDEV 361
++R C P RP +E+
Sbjct: 235 QHLIRWCLALRPSDRPTFEEI 255
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 201
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 253
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 254 IRWCLALRPSDRPTFEEI 271
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 182
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHL 234
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 235 IRWCLALRPSDRPTFEEI 252
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 199 FLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGV 257
F +R L ++ + + + H+ ++HRD+K EN+L+D NR LK+ DFG
Sbjct: 137 FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196
Query: 258 ARVEAQNPRDMTGETGTLGYMAPEVLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSF 316
+ T GT Y PE + Y+ R V+S GI L+++ C D+P+
Sbjct: 197 GALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254
Query: 317 TDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEV 361
RQ + S ++R C P RP +E+
Sbjct: 255 IIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 223 GLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPE 281
+ + H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 226
Query: 282 VLDGKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSL 340
+ Y+ R V+S GI L+++ C D+P+ RQ + S
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SEC 278
Query: 341 ASIMRKCWDANPDKRPVMDEV 361
++R C P RP +E+
Sbjct: 279 QHLIRWCLALRPSDRPTFEEI 299
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 214
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHL 266
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 187
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 239
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 240 IRWCLALRPSDRPTFEEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 229
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHL 281
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 282 IRWCLALRPSDRPTFEEI 299
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 52/253 (20%)
Query: 84 LAKLDIRHEIARGTYGTVYRGA--YDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVA 141
L K ++ ++ +G YG V++ G+ VAVK + D S +A + +FR+ +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI---FDAFQNSTDA---QRTFREIMI 61
Query: 142 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLI 201
+ + H N+ + + R +V +Y+ L +
Sbjct: 62 LTELSGHENIVNLLNVLRADND------------------RDVYLVFDYMETD-LHAVIR 102
Query: 202 RNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLLDANRTLKIADFGVARV- 260
N + + + V+ L + + YLHS ++HRD+K N+LL+A +K+ADFG++R
Sbjct: 103 ANILEPVHKQYVV---YQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159
Query: 261 ----------------EAQNPRD----MTGETGTLGYMAPEVLDGKP-YNRKCDVYSFGI 299
+N D +T T Y APE+L G Y + D++S G
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC 219
Query: 300 CLWEIYCCDMPYP 312
L EI C +P
Sbjct: 220 ILGEILCGKPIFP 232
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 215
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHL 267
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 214
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHL 266
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 215
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + S +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHL 267
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
Query: 186 VVVEYLPGGTLKKFLIRNKR-KKLAFKVVIQIALDLARGLSYLHSKTIVHRDVKTENMLL 244
+V E + GG++ + + + +L VV+Q D+A L +LH+K I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 245 DANRT---LKIADFGVARVEAQN--------PRDMTGETGTLGYMAPEVL-----DGKPY 288
+ +KI DF + N P +T G+ YMAPEV+ + Y
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 289 NRKCDVYSFGICLW 302
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 228 HSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGK 286
H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYH 184
Query: 287 PYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMR 345
Y+ R V+S GI L+++ C D+P+ RQ + + C ++R
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE---C-----QHLIR 236
Query: 346 KCWDANPDKRPVMDEV 361
C P RP +E+
Sbjct: 237 WCLALRPSDRPTFEEI 252
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 26/139 (18%)
Query: 177 NSLPSRACCVVV-EYLPGGTLKKFLIRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
N R C ++V E L GG L + + + +I + + YLHS I HR
Sbjct: 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR 141
Query: 236 DVKTENMLLDANR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKC 292
DVK EN+L + R LK+ DFG A ++ TGE Y++ C
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFA-------KETTGEK---------------YDKSC 179
Query: 293 DVYSFGICLWEIYCCDMPY 311
D++S G+ ++ + C P+
Sbjct: 180 DMWSLGVIMYILLCGYPPF 198
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + +A +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + +A +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 209
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + C +
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE---C-----QHL 261
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 262 IRWCLALRPSDRPTFEEI 279
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 215
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHL 267
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 229
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHL 281
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 282 IRWCLALRPSDRPTFEEI 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 234
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHL 286
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 287 IRWCLALRPSDRPTFEEI 304
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 214
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHL 266
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 267 IRWCLALRPSDRPTFEEI 284
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 138 QEVAVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSL-----------------P 180
+E+ + + LDH N+ K + TT + P D HN L P
Sbjct: 49 RELDIMKVLDHVNIIKLVDY-FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNP 107
Query: 181 S--RACCVVVEYLPGGTLKKFL---IRNKRKKLAFKVVIQIALDLARGLSYLHSKTIVHR 235
S + V++EY+P TL K L IR+ R + ++ L R + ++HS I HR
Sbjct: 108 SQNKYLNVIMEYVPD-TLHKVLKSFIRSGRS-IPMNLISIYIYQLFRAVGFIHSLGICHR 165
Query: 236 DVKTENMLLDA-NRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKC 292
D+K +N+L+++ + TLK+ DFG A ++ P + Y APE++ G Y
Sbjct: 166 DIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS--VAXICSRFYRAPELMLGATEYTPSI 223
Query: 293 DVYSFGICLWEI 304
D++S G E+
Sbjct: 224 DLWSIGCVFGEL 235
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 215
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHL 267
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 268 IRWCLALRPSDRPTFEEI 285
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 202
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHL 254
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 255 IRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 201
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHL 253
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 254 IRWCLALRPSDRPTFEEI 271
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 226 YLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLD 284
+ H+ ++HRD+K EN+L+D NR LK+ DFG + T GT Y PE +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIR 202
Query: 285 GKPYN-RKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASI 343
Y+ R V+S GI L+++ C D+P+ RQ + + +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHL 254
Query: 344 MRKCWDANPDKRPVMDEV 361
+R C P RP +E+
Sbjct: 255 IRWCLALRPXDRPTFEEI 272
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 62 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 111 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 215 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 40 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 89 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 193 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 36 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 85 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 128
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 129 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 188
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 189 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 47 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 96 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 139
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 140 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 199
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 200 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 40 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 89 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 193 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 62 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 111 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 215 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 66 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 114
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 115 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 158
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 159 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 219 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 56 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 104
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 105 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 148
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 149 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 209 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 32 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 80
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 81 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 124
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 125 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 184
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 185 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 29 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 78 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 121
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 122 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 181
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 182 S-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 107 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 155
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 156 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 199
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 200 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 260 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 41 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 90 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 133
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 134 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 193
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 194 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 64 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 112
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 113 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 156
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 157 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 217 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 28 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 77 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 181 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 93 IARGTYGTVYRGAYDGQDVAVKILDWAEDGMVTSAEAAAIRASFRQEVAVWQKLDHPNVT 152
I G++G VY+ K+ D E +V + + +E+ + +KLDH N+
Sbjct: 33 IGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNIV 81
Query: 153 K--FIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAF 210
+ + S G ++ +V++Y+P + ++ K+
Sbjct: 82 RLRYFFYSSGEKKDEV----------------YLNLVLDYVPETVYRVARHYSRAKQTLP 125
Query: 211 KVVIQIAL-DLARGLSYLHSKTIVHRDVKTENMLLDANR-TLKIADFGVARVEAQNPRDM 268
+ +++ + L R L+Y+HS I HRD+K +N+LLD + LK+ DFG A+ + ++
Sbjct: 126 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 185
Query: 269 TGETGTLGYMAPEVLDGKP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVR 325
+ + Y APE++ G Y DV+S G L E+ +P S D +++
Sbjct: 186 S-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,915,242
Number of Sequences: 62578
Number of extensions: 493734
Number of successful extensions: 4148
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1076
Number of HSP's gapped (non-prelim): 1175
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)