Query 048729
Match_columns 330
No_of_seqs 142 out of 1674
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 12:28:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048729.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048729hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 9.7E-55 2.1E-59 400.9 30.0 311 11-329 12-533 (537)
2 KOG1177 Long chain fatty acid 100.0 1.2E-51 2.6E-56 358.6 30.5 319 4-328 39-587 (596)
3 COG1021 EntE Peptide arylation 100.0 4E-52 8.6E-57 354.2 24.0 309 12-328 25-538 (542)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 1.3E-49 2.9E-54 376.3 35.2 313 10-328 6-527 (534)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 1.1E-48 2.4E-53 358.9 28.8 299 20-327 14-521 (528)
6 PRK07788 acyl-CoA synthetase; 100.0 5.1E-48 1.1E-52 368.0 33.8 299 15-325 49-548 (549)
7 PLN03102 acyl-activating enzym 100.0 7.6E-47 1.7E-51 361.6 36.7 316 13-329 12-555 (579)
8 PLN02654 acetate-CoA ligase 100.0 5.5E-47 1.2E-51 367.4 33.5 310 14-328 86-640 (666)
9 PRK06839 acyl-CoA synthetase; 100.0 1.7E-46 3.6E-51 353.4 34.5 304 16-328 3-495 (496)
10 PTZ00237 acetyl-CoA synthetase 100.0 9.9E-47 2.1E-51 364.4 31.8 309 16-328 60-623 (647)
11 PLN02860 o-succinylbenzoate-Co 100.0 1.9E-46 4.2E-51 358.0 33.4 319 10-328 2-554 (563)
12 PRK05677 long-chain-fatty-acid 100.0 3.2E-46 6.8E-51 356.6 34.1 304 15-326 24-555 (562)
13 PRK06155 crotonobetaine/carnit 100.0 4.4E-46 9.6E-51 353.9 34.9 314 5-327 11-523 (542)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.3E-46 7.1E-51 360.6 33.4 308 16-328 58-602 (625)
15 PRK07529 AMP-binding domain pr 100.0 5.8E-46 1.3E-50 358.7 34.9 308 11-328 21-570 (632)
16 PLN02246 4-coumarate--CoA liga 100.0 8E-46 1.7E-50 352.0 35.3 310 12-328 20-536 (537)
17 TIGR02316 propion_prpE propion 100.0 3.7E-46 7.9E-51 360.2 33.3 311 15-328 51-604 (628)
18 PRK07638 acyl-CoA synthetase; 100.0 4.2E-46 9E-51 350.0 32.0 301 15-329 1-482 (487)
19 PLN02574 4-coumarate--CoA liga 100.0 3.8E-46 8.2E-51 355.8 31.9 307 14-328 39-554 (560)
20 PRK08314 long-chain-fatty-acid 100.0 1.2E-45 2.7E-50 351.5 35.2 317 7-328 2-542 (546)
21 PRK13382 acyl-CoA synthetase; 100.0 9.1E-46 2E-50 351.5 33.7 299 14-324 42-536 (537)
22 PRK00174 acetyl-CoA synthetase 100.0 1.2E-45 2.5E-50 357.5 33.8 306 18-328 70-610 (637)
23 PRK08316 acyl-CoA synthetase; 100.0 2.9E-45 6.3E-50 347.1 35.2 310 11-329 7-520 (523)
24 PRK07470 acyl-CoA synthetase; 100.0 3.1E-45 6.7E-50 347.4 34.9 311 10-329 2-519 (528)
25 PRK08315 AMP-binding domain pr 100.0 5.9E-45 1.3E-49 347.8 36.8 318 5-329 6-552 (559)
26 PRK05605 long-chain-fatty-acid 100.0 3.2E-45 6.9E-50 350.5 35.0 314 7-328 24-569 (573)
27 PRK07514 malonyl-CoA synthase; 100.0 4.2E-45 9E-50 344.6 35.1 308 14-329 2-502 (504)
28 PRK13295 cyclohexanecarboxylat 100.0 6.9E-45 1.5E-49 346.3 36.2 307 12-328 21-544 (547)
29 PRK03640 O-succinylbenzoic aci 100.0 3.8E-45 8.2E-50 343.1 33.9 303 15-329 2-483 (483)
30 PRK07656 long-chain-fatty-acid 100.0 4.4E-45 9.4E-50 345.1 34.1 305 12-324 2-512 (513)
31 PRK06060 acyl-CoA synthetase; 100.0 1.6E-45 3.4E-50 360.2 31.1 303 15-326 4-490 (705)
32 PRK08008 caiC putative crotono 100.0 5.5E-45 1.2E-49 344.8 32.8 302 14-323 6-517 (517)
33 PRK06334 long chain fatty acid 100.0 2.8E-45 6.2E-50 348.0 30.8 302 12-329 16-536 (539)
34 PRK06164 acyl-CoA synthetase; 100.0 1.2E-44 2.5E-49 344.4 34.7 314 9-329 4-533 (540)
35 PRK09088 acyl-CoA synthetase; 100.0 4.8E-45 1E-49 342.8 31.4 301 22-330 2-487 (488)
36 PRK05852 acyl-CoA synthetase; 100.0 7E-45 1.5E-49 345.4 32.6 307 13-328 14-532 (534)
37 PRK03584 acetoacetyl-CoA synth 100.0 7.1E-45 1.5E-49 352.9 33.2 307 14-328 85-625 (655)
38 PRK06145 acyl-CoA synthetase; 100.0 8.7E-45 1.9E-49 341.8 32.9 304 15-327 2-496 (497)
39 PLN02330 4-coumarate--CoA liga 100.0 6.3E-45 1.4E-49 346.5 31.8 309 14-329 27-542 (546)
40 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.1E-44 2.4E-49 350.6 33.1 306 13-327 85-625 (652)
41 PRK06178 acyl-CoA synthetase; 100.0 3.4E-44 7.4E-49 343.0 35.7 312 10-330 28-567 (567)
42 PRK06188 acyl-CoA synthetase; 100.0 3.1E-44 6.7E-49 340.2 34.9 307 13-328 10-517 (524)
43 PRK09274 peptide synthase; Pro 100.0 1.5E-44 3.3E-49 344.4 32.6 309 12-328 3-548 (552)
44 PRK12583 acyl-CoA synthetase; 100.0 6.1E-44 1.3E-48 340.7 36.7 317 4-328 7-552 (558)
45 PRK06187 long-chain-fatty-acid 100.0 4.3E-44 9.3E-49 338.8 35.1 311 12-329 3-520 (521)
46 PRK07786 long-chain-fatty-acid 100.0 4.4E-44 9.6E-49 340.4 35.0 313 9-329 11-525 (542)
47 PRK10524 prpE propionyl-CoA sy 100.0 2.4E-44 5.2E-49 347.9 33.5 310 15-327 52-604 (629)
48 PRK07867 acyl-CoA synthetase; 100.0 4.8E-44 1E-48 338.9 34.7 306 14-328 4-507 (529)
49 PRK05857 acyl-CoA synthetase; 100.0 1.7E-44 3.6E-49 343.0 31.7 314 12-328 11-531 (540)
50 PRK04319 acetyl-CoA synthetase 100.0 1.5E-44 3.3E-49 345.6 31.3 306 17-328 45-559 (570)
51 PRK06087 short chain acyl-CoA 100.0 5.9E-44 1.3E-48 340.0 34.3 311 11-328 19-536 (547)
52 PRK08162 acyl-CoA synthetase; 100.0 1.3E-43 2.9E-48 337.5 35.4 320 4-329 7-540 (545)
53 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.7E-44 1.4E-48 338.1 33.1 303 13-323 21-527 (527)
54 PRK06710 long-chain-fatty-acid 100.0 9.1E-44 2E-48 339.8 34.1 308 13-328 22-555 (563)
55 PRK12467 peptide synthase; Pro 100.0 3E-45 6.5E-50 405.6 27.4 304 14-326 3094-3592(3956)
56 PRK07059 Long-chain-fatty-acid 100.0 1.4E-43 3E-48 338.2 34.5 305 12-325 20-555 (557)
57 TIGR01734 D-ala-DACP-lig D-ala 100.0 5.3E-44 1.2E-48 336.9 31.0 307 16-327 1-501 (502)
58 PRK13383 acyl-CoA synthetase; 100.0 1.9E-43 4.1E-48 334.2 33.8 299 13-323 33-515 (516)
59 PRK12492 long-chain-fatty-acid 100.0 2.1E-43 4.6E-48 337.1 34.2 303 15-326 24-562 (562)
60 PRK13388 acyl-CoA synthetase; 100.0 1.2E-43 2.6E-48 337.1 32.2 307 15-329 3-507 (540)
61 PRK08279 long-chain-acyl-CoA s 100.0 2.5E-43 5.3E-48 339.2 33.6 313 10-329 32-565 (600)
62 PRK12316 peptide synthase; Pro 100.0 2.8E-44 6.1E-49 403.4 31.1 304 14-326 2002-2502(5163)
63 PLN02736 long-chain acyl-CoA s 100.0 8.9E-44 1.9E-48 344.8 30.0 314 12-328 41-641 (651)
64 PRK08751 putative long-chain f 100.0 5E-43 1.1E-47 334.6 34.0 303 15-326 25-558 (560)
65 PRK05620 long-chain-fatty-acid 100.0 4.8E-43 1E-47 335.6 33.6 315 12-329 7-558 (576)
66 PRK07769 long-chain-fatty-acid 100.0 4E-43 8.6E-48 339.5 33.3 308 14-328 20-614 (631)
67 PRK07008 long-chain-fatty-acid 100.0 7E-43 1.5E-47 331.9 34.4 307 13-329 8-534 (539)
68 TIGR03098 ligase_PEP_1 acyl-Co 100.0 5.1E-43 1.1E-47 331.2 33.0 301 16-324 1-514 (515)
69 PRK06018 putative acyl-CoA syn 100.0 1.4E-42 3E-47 330.1 35.9 308 13-329 8-535 (542)
70 PRK10252 entF enterobactin syn 100.0 1.4E-43 3E-48 367.7 31.4 305 12-324 455-963 (1296)
71 PRK10946 entE enterobactin syn 100.0 5.4E-43 1.2E-47 332.5 32.8 305 13-329 23-533 (536)
72 TIGR03443 alpha_am_amid L-amin 100.0 2E-43 4.2E-48 368.2 32.2 308 14-324 235-824 (1389)
73 PRK12316 peptide synthase; Pro 100.0 8.2E-44 1.8E-48 399.7 30.9 301 14-326 510-1004(5163)
74 PLN02479 acetate-CoA ligase 100.0 1.9E-42 4.2E-47 330.8 34.2 320 7-328 12-558 (567)
75 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.4E-42 5.2E-47 328.3 34.2 300 14-323 21-537 (538)
76 PRK05691 peptide synthase; Val 100.0 1.7E-43 3.7E-48 394.5 30.0 306 14-325 3719-4225(4334)
77 PRK13390 acyl-CoA synthetase; 100.0 1.4E-42 3.1E-47 327.1 31.2 295 23-323 5-501 (501)
78 PRK08974 long-chain-fatty-acid 100.0 6.2E-42 1.4E-46 327.0 34.8 304 14-327 22-554 (560)
79 PRK12476 putative fatty-acid-- 100.0 3.6E-42 7.8E-47 331.5 33.1 307 14-329 33-607 (612)
80 PRK04813 D-alanine--poly(phosp 100.0 3E-42 6.6E-47 324.9 31.9 309 15-328 2-503 (503)
81 PRK08633 2-acyl-glycerophospho 100.0 1.6E-42 3.4E-47 356.2 32.5 308 12-330 612-1145(1146)
82 PLN03052 acetate--CoA ligase; 100.0 3.7E-42 8E-47 335.1 32.1 314 12-328 171-721 (728)
83 PRK05691 peptide synthase; Val 100.0 1.3E-42 2.7E-47 387.6 31.8 306 11-325 1127-1625(4334)
84 PRK12467 peptide synthase; Pro 100.0 1.4E-42 2.9E-47 384.6 31.5 310 12-326 509-1016(3956)
85 PRK08043 bifunctional acyl-[ac 100.0 4.7E-42 1E-46 336.1 31.8 308 14-329 203-714 (718)
86 KOG1175 Acyl-CoA synthetase [L 100.0 2.3E-42 5.1E-47 318.3 27.0 297 28-328 78-602 (626)
87 PRK05851 long-chain-fatty-acid 100.0 7.4E-42 1.6E-46 323.9 29.8 296 17-328 4-522 (525)
88 PRK09029 O-succinylbenzoic aci 100.0 1.8E-41 3.8E-46 316.2 31.2 305 17-329 4-454 (458)
89 PRK13391 acyl-CoA synthetase; 100.0 4.3E-41 9.2E-46 317.8 33.0 302 22-328 4-509 (511)
90 TIGR02262 benz_CoA_lig benzoat 100.0 3.3E-41 7.2E-46 318.4 31.6 303 17-325 6-508 (508)
91 PRK07798 acyl-CoA synthetase; 100.0 6.9E-41 1.5E-45 317.8 33.7 307 14-328 2-532 (533)
92 PRK07787 acyl-CoA synthetase; 100.0 1.7E-41 3.7E-46 317.4 28.4 289 24-325 9-470 (471)
93 PRK07868 acyl-CoA synthetase; 100.0 3.7E-41 7.9E-46 338.1 32.2 298 12-326 444-956 (994)
94 TIGR03205 pimA dicarboxylate-- 100.0 8.3E-41 1.8E-45 317.9 32.7 304 14-323 20-541 (541)
95 PLN02614 long-chain acyl-CoA s 100.0 3.3E-41 7.1E-46 326.6 29.9 308 15-328 45-649 (666)
96 PRK08276 long-chain-fatty-acid 100.0 2.5E-40 5.4E-45 312.0 31.4 290 32-327 3-495 (502)
97 PRK05850 acyl-CoA synthetase; 100.0 1.8E-40 3.9E-45 318.0 30.7 308 15-328 1-568 (578)
98 PRK12406 long-chain-fatty-acid 100.0 5.5E-40 1.2E-44 310.2 33.0 288 32-328 3-503 (509)
99 PLN02861 long-chain-fatty-acid 100.0 3.3E-40 7.1E-45 319.8 31.1 312 13-328 41-646 (660)
100 PRK09192 acyl-CoA synthetase; 100.0 5.7E-40 1.2E-44 314.5 32.1 303 15-328 21-566 (579)
101 PRK07445 O-succinylbenzoic aci 100.0 3.5E-40 7.5E-45 306.3 28.6 278 40-328 19-447 (452)
102 PLN02387 long-chain-fatty-acid 100.0 1.6E-39 3.4E-44 316.4 31.3 312 14-328 57-689 (696)
103 PRK06814 acylglycerophosphoeth 100.0 2.1E-39 4.6E-44 332.5 31.5 308 13-328 629-1132(1140)
104 PRK08180 feruloyl-CoA synthase 100.0 1.7E-39 3.8E-44 313.0 26.8 315 8-328 32-596 (614)
105 PTZ00216 acyl-CoA synthetase; 100.0 1.1E-38 2.3E-43 311.2 29.4 309 14-328 68-691 (700)
106 PTZ00342 acyl-CoA synthetase; 100.0 1.5E-38 3.3E-43 308.6 29.6 311 13-328 59-734 (746)
107 PLN02430 long-chain-fatty-acid 100.0 7.9E-38 1.7E-42 302.8 30.5 312 13-328 40-646 (660)
108 KOG1179 Very long-chain acyl-C 100.0 5.5E-38 1.2E-42 278.8 25.8 311 11-325 73-610 (649)
109 PRK12582 acyl-CoA synthetase; 100.0 4E-38 8.7E-43 304.0 23.8 314 9-328 43-607 (624)
110 TIGR01923 menE O-succinylbenzo 100.0 1.4E-37 3E-42 288.1 25.9 274 42-322 1-436 (436)
111 PRK07768 long-chain-fatty-acid 100.0 1.2E-36 2.6E-41 289.7 30.3 304 16-327 3-544 (545)
112 COG1022 FAA1 Long-chain acyl-C 100.0 1.4E-36 3E-41 282.9 28.0 313 12-328 13-601 (613)
113 PLN03051 acyl-activating enzym 100.0 4.2E-36 9.1E-41 282.8 26.7 277 41-328 139-491 (499)
114 PRK08308 acyl-CoA synthetase; 100.0 2.6E-35 5.7E-40 271.2 27.7 264 33-322 1-407 (414)
115 KOG1256 Long-chain acyl-CoA sy 100.0 7.9E-35 1.7E-39 268.1 26.1 313 10-328 70-680 (691)
116 PRK07824 O-succinylbenzoic aci 100.0 1E-31 2.2E-36 242.7 29.2 290 27-328 32-357 (358)
117 KOG1180 Acyl-CoA synthetase [L 100.0 1.2E-31 2.6E-36 237.8 22.7 316 10-328 36-669 (678)
118 PF00501 AMP-binding: AMP-bind 100.0 3.9E-30 8.6E-35 236.9 21.1 206 21-229 1-417 (417)
119 TIGR01733 AA-adenyl-dom amino 100.0 1.2E-28 2.7E-33 226.3 19.5 208 42-253 1-408 (408)
120 KOG3628 Predicted AMP-binding 99.9 1.6E-25 3.6E-30 211.4 24.9 298 15-326 770-1349(1363)
121 PTZ00297 pantothenate kinase; 99.9 2.2E-23 4.7E-28 211.6 28.5 105 15-121 427-536 (1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 6.6E-23 1.4E-27 185.6 28.0 273 14-318 79-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 99.9 5.4E-23 1.2E-27 189.8 24.7 261 41-319 95-417 (422)
124 PRK09188 serine/threonine prot 99.9 6.8E-24 1.5E-28 188.4 14.8 116 198-326 207-326 (365)
125 COG1020 EntF Non-ribosomal pep 99.9 2.1E-22 4.6E-27 195.6 20.4 228 15-246 227-642 (642)
126 KOG1178 Non-ribosomal peptide 99.9 1.6E-22 3.4E-27 196.1 16.7 126 200-328 454-579 (1032)
127 COG1541 PaaK Coenzyme F390 syn 99.8 1.3E-17 2.7E-22 148.6 23.6 259 41-319 110-430 (438)
128 TIGR03335 F390_ftsA coenzyme F 99.7 7.5E-16 1.6E-20 142.8 24.7 261 41-319 106-440 (445)
129 KOG3628 Predicted AMP-binding 99.5 1E-12 2.3E-17 125.8 18.4 108 16-123 95-210 (1363)
130 TIGR03089 conserved hypothetic 99.5 5.6E-13 1.2E-17 112.2 10.8 92 21-125 2-100 (227)
131 PF13193 AMP-binding_C: AMP-bi 99.4 4.5E-13 9.6E-18 91.7 5.3 70 237-316 1-73 (73)
132 TIGR02304 aden_form_hyp probab 98.5 1.6E-05 3.6E-10 73.0 19.7 194 60-271 138-377 (430)
133 PF14535 AMP-binding_C_2: AMP- 97.9 1.8E-05 4E-10 56.9 5.0 88 230-319 1-91 (96)
134 PLN03051 acyl-activating enzym 97.3 0.00061 1.3E-08 64.5 6.5 50 72-121 1-50 (499)
135 KOG1177 Long chain fatty acid 95.3 0.2 4.2E-06 46.0 10.2 95 28-125 232-337 (596)
136 PF03321 GH3: GH3 auxin-respon 95.2 0.15 3.3E-06 48.6 9.9 88 202-294 371-467 (528)
137 TIGR03089 conserved hypothetic 95.1 0.19 4.1E-06 42.3 9.3 55 58-114 171-227 (227)
138 PF04443 LuxE: Acyl-protein sy 94.5 3.6 7.8E-05 37.3 17.6 65 153-234 287-359 (365)
139 PRK06187 long-chain-fatty-acid 94.5 0.43 9.4E-06 45.1 11.0 82 41-126 187-269 (521)
140 PRK06164 acyl-CoA synthetase; 94.1 0.54 1.2E-05 44.9 11.0 93 29-125 180-282 (540)
141 TIGR03098 ligase_PEP_1 acyl-Co 94.1 0.62 1.3E-05 44.1 11.2 79 41-123 181-260 (515)
142 PRK06334 long chain fatty acid 94.1 0.61 1.3E-05 44.7 11.2 95 28-125 181-286 (539)
143 PRK07656 long-chain-fatty-acid 93.8 0.39 8.5E-06 45.4 9.2 80 40-123 185-266 (513)
144 PRK04319 acetyl-CoA synthetase 93.6 0.71 1.5E-05 44.5 10.7 82 41-125 225-308 (570)
145 PRK08315 AMP-binding domain pr 93.6 0.8 1.7E-05 43.9 11.1 81 40-123 218-300 (559)
146 PRK12583 acyl-CoA synthetase; 93.6 0.91 2E-05 43.5 11.4 81 40-123 220-302 (558)
147 PLN02736 long-chain acyl-CoA s 92.5 0.99 2.2E-05 44.4 10.1 95 28-127 219-323 (651)
148 PRK08314 long-chain-fatty-acid 92.4 1.5 3.2E-05 41.9 11.0 92 28-123 188-290 (546)
149 PRK07638 acyl-CoA synthetase; 92.3 1.7 3.7E-05 40.9 11.2 82 41-126 163-245 (487)
150 PF00501 AMP-binding: AMP-bind 92.3 0.98 2.1E-05 41.4 9.3 96 28-127 153-262 (417)
151 TIGR01733 AA-adenyl-dom amino 92.2 1.2 2.6E-05 40.6 9.8 96 29-127 119-226 (408)
152 PLN02860 o-succinylbenzoate-Co 92.2 1.5 3.2E-05 42.3 10.7 95 28-126 170-274 (563)
153 PRK05852 acyl-CoA synthetase; 92.1 2.7 5.8E-05 40.1 12.2 83 41-126 196-281 (534)
154 PRK03640 O-succinylbenzoic aci 91.9 1.7 3.6E-05 40.8 10.6 82 41-126 161-243 (483)
155 TIGR01923 menE O-succinylbenzo 91.5 0.84 1.8E-05 42.1 8.0 80 40-125 130-210 (436)
156 PLN03052 acetate--CoA ligase; 91.1 1.8 3.8E-05 43.3 10.1 81 41-124 376-457 (728)
157 PRK08308 acyl-CoA synthetase; 91.1 3.1 6.8E-05 38.2 11.2 81 40-124 120-202 (414)
158 PLN02614 long-chain acyl-CoA s 91.0 1.7 3.8E-05 42.9 9.9 85 41-127 243-330 (666)
159 PRK06188 acyl-CoA synthetase; 91.0 1.7 3.7E-05 41.3 9.7 79 41-123 188-266 (524)
160 PLN02246 4-coumarate--CoA liga 90.8 2.2 4.7E-05 40.8 10.2 95 28-123 177-283 (537)
161 COG0318 CaiC Acyl-CoA syntheta 90.7 2.5 5.3E-05 40.6 10.4 99 28-127 169-279 (534)
162 PRK13295 cyclohexanecarboxylat 90.7 3.5 7.5E-05 39.5 11.5 79 41-123 217-297 (547)
163 PRK10252 entF enterobactin syn 90.5 2.3 4.9E-05 45.5 11.0 81 41-124 618-701 (1296)
164 PRK05620 long-chain-fatty-acid 90.4 3.2 7E-05 40.0 11.0 83 41-124 201-284 (576)
165 PRK08316 acyl-CoA synthetase; 90.2 3.6 7.7E-05 39.0 11.0 80 40-123 190-271 (523)
166 TIGR02262 benz_CoA_lig benzoat 90.2 3 6.5E-05 39.5 10.5 81 41-123 181-263 (508)
167 TIGR03443 alpha_am_amid L-amin 90.1 1.9 4E-05 46.6 9.9 82 41-125 435-519 (1389)
168 COG1022 FAA1 Long-chain acyl-C 90.1 2.8 6.2E-05 40.6 10.0 96 26-126 187-293 (613)
169 PRK08043 bifunctional acyl-[ac 90.0 3 6.4E-05 41.6 10.7 78 41-121 385-464 (718)
170 PRK07529 AMP-binding domain pr 89.9 3.4 7.4E-05 40.5 10.9 94 28-124 211-320 (632)
171 PRK08633 2-acyl-glycerophospho 89.9 3.2 7E-05 43.7 11.4 94 28-124 780-884 (1146)
172 PRK08279 long-chain-acyl-CoA s 89.7 3.3 7.1E-05 40.2 10.5 80 41-124 219-300 (600)
173 TIGR02275 DHB_AMP_lig 2,3-dihy 89.6 3.8 8.3E-05 39.0 10.8 94 28-125 181-286 (527)
174 COG0365 Acs Acyl-coenzyme A sy 89.5 2 4.4E-05 40.8 8.5 87 41-129 191-281 (528)
175 PRK13388 acyl-CoA synthetase; 89.5 4.8 0.00011 38.5 11.4 89 28-120 148-247 (540)
176 PRK07788 acyl-CoA synthetase; 89.5 2 4.4E-05 41.1 8.8 80 41-124 227-307 (549)
177 PRK07008 long-chain-fatty-acid 89.5 2.2 4.7E-05 40.8 9.0 83 41-125 196-280 (539)
178 PRK06155 crotonobetaine/carnit 88.9 4.1 8.8E-05 39.1 10.4 80 41-124 200-280 (542)
179 PLN02861 long-chain-fatty-acid 88.6 3.4 7.4E-05 40.8 9.8 97 29-127 219-327 (660)
180 PRK10946 entE enterobactin syn 88.4 3.9 8.4E-05 39.1 9.9 82 41-126 202-286 (536)
181 PLN02654 acetate-CoA ligase 88.3 4.1 8.8E-05 40.3 10.2 67 59-125 311-382 (666)
182 PRK06839 acyl-CoA synthetase; 88.1 6.8 0.00015 36.8 11.3 82 41-126 169-252 (496)
183 PRK07787 acyl-CoA synthetase; 88.0 5.7 0.00012 37.2 10.6 78 41-123 148-227 (471)
184 PRK05851 long-chain-fatty-acid 87.9 4.2 9.1E-05 38.8 9.8 75 41-118 172-251 (525)
185 PRK06814 acylglycerophosphoeth 87.9 6.7 0.00015 41.4 12.1 93 28-123 791-894 (1140)
186 PTZ00342 acyl-CoA synthetase; 87.9 4.5 9.7E-05 40.6 10.2 97 28-127 302-408 (746)
187 TIGR01734 D-ala-DACP-lig D-ala 87.4 5.4 0.00012 37.6 10.1 81 40-123 160-243 (502)
188 PRK13382 acyl-CoA synthetase; 87.2 6.5 0.00014 37.6 10.7 80 41-124 216-296 (537)
189 PRK13383 acyl-CoA synthetase; 87.0 7.8 0.00017 36.7 11.0 70 54-124 206-276 (516)
190 PRK03584 acetoacetyl-CoA synth 86.3 4.7 0.0001 39.6 9.3 66 59-124 299-367 (655)
191 PLN02249 indole-3-acetic acid- 86.3 7.3 0.00016 37.8 10.2 43 202-244 410-456 (597)
192 TIGR02316 propion_prpE propion 85.8 5.1 0.00011 39.2 9.2 67 59-125 268-339 (628)
193 PRK04813 D-alanine--poly(phosp 85.7 11 0.00025 35.3 11.4 81 40-123 162-245 (503)
194 PTZ00297 pantothenate kinase; 85.1 7.6 0.00017 41.8 10.4 256 41-328 621-995 (1452)
195 PRK07868 acyl-CoA synthetase; 85.0 5.6 0.00012 41.4 9.5 65 59-124 640-706 (994)
196 PRK07867 acyl-CoA synthetase; 85.0 12 0.00025 35.8 11.1 76 41-120 172-249 (529)
197 PRK07786 long-chain-fatty-acid 85.0 11 0.00023 36.1 10.9 80 41-123 194-276 (542)
198 PRK12406 long-chain-fatty-acid 84.9 9.6 0.00021 36.0 10.4 65 59-124 190-255 (509)
199 TIGR03208 cyc_hxne_CoA_lg cycl 84.8 11 0.00024 36.0 10.9 79 41-123 215-295 (538)
200 PRK06060 acyl-CoA synthetase; 84.5 7.3 0.00016 38.7 9.8 81 41-123 165-247 (705)
201 PRK07470 acyl-CoA synthetase; 84.1 8.1 0.00017 36.7 9.6 85 41-126 183-268 (528)
202 PRK06087 short chain acyl-CoA 83.8 12 0.00026 35.8 10.7 75 41-119 207-283 (547)
203 TIGR02188 Ac_CoA_lig_AcsA acet 83.3 9.3 0.0002 37.3 9.9 67 59-125 272-343 (625)
204 PRK00174 acetyl-CoA synthetase 83.2 11 0.00024 37.0 10.3 68 59-126 281-353 (637)
205 PLN02430 long-chain-fatty-acid 82.9 11 0.00023 37.4 10.1 84 41-127 240-327 (660)
206 PRK07798 acyl-CoA synthetase; 82.7 15 0.00033 34.7 10.9 80 41-120 183-276 (533)
207 TIGR01217 ac_ac_CoA_syn acetoa 82.0 7.8 0.00017 38.2 8.7 64 59-122 300-366 (652)
208 PLN02574 4-coumarate--CoA liga 82.0 13 0.00029 35.6 10.3 83 41-124 218-304 (560)
209 PRK08180 feruloyl-CoA synthase 81.8 14 0.0003 36.1 10.4 94 28-124 207-316 (614)
210 PRK06018 putative acyl-CoA syn 81.2 13 0.00028 35.5 9.8 67 59-125 214-281 (542)
211 KOG1179 Very long-chain acyl-C 80.8 8.8 0.00019 36.5 7.9 74 41-119 262-338 (649)
212 PRK06145 acyl-CoA synthetase; 79.5 22 0.00049 33.3 10.7 81 41-125 169-251 (497)
213 PRK10524 prpE propionyl-CoA sy 79.4 12 0.00026 36.6 9.1 66 59-124 269-339 (629)
214 PRK08008 caiC putative crotono 79.1 20 0.00044 33.9 10.3 83 40-126 192-276 (517)
215 PRK07769 long-chain-fatty-acid 78.8 18 0.00038 35.5 10.0 79 41-122 200-285 (631)
216 PRK06178 acyl-CoA synthetase; 77.8 24 0.00052 33.9 10.5 77 41-120 229-307 (567)
217 PRK13391 acyl-CoA synthetase; 76.9 15 0.00033 34.7 8.8 65 59-124 194-259 (511)
218 PLN02479 acetate-CoA ligase 76.5 27 0.00059 33.6 10.5 83 41-128 215-299 (567)
219 PRK07514 malonyl-CoA synthase; 74.9 25 0.00054 33.1 9.7 76 41-122 176-253 (504)
220 PRK05857 acyl-CoA synthetase; 74.8 16 0.00035 34.9 8.4 83 41-125 189-273 (540)
221 PTZ00237 acetyl-CoA synthetase 74.2 23 0.00049 34.9 9.4 66 59-124 290-361 (647)
222 PRK07768 long-chain-fatty-acid 74.2 29 0.00064 33.1 10.0 78 40-120 171-254 (545)
223 COG1167 ARO8 Transcriptional r 73.8 21 0.00046 33.5 8.6 61 62-123 176-237 (459)
224 PLN02247 indole-3-acetic acid- 73.4 11 0.00024 36.5 6.7 45 201-245 416-464 (606)
225 PRK12476 putative fatty-acid-- 73.2 25 0.00055 34.2 9.4 79 40-122 212-298 (612)
226 PRK09274 peptide synthase; Pro 72.1 34 0.00073 32.7 9.9 76 41-125 194-275 (552)
227 PLN02620 indole-3-acetic acid- 71.4 14 0.0003 35.9 6.8 45 201-245 422-470 (612)
228 PRK09088 acyl-CoA synthetase; 70.6 59 0.0013 30.4 11.1 77 41-121 155-235 (488)
229 PRK12492 long-chain-fatty-acid 70.4 44 0.00096 32.1 10.3 84 41-124 227-319 (562)
230 PLN03102 acyl-activating enzym 70.2 38 0.00082 32.8 9.8 66 60-126 222-288 (579)
231 PRK08162 acyl-CoA synthetase; 69.9 48 0.001 31.6 10.4 81 41-126 202-284 (545)
232 KOG1176 Acyl-CoA synthetase [L 69.1 30 0.00064 33.3 8.5 82 41-126 204-287 (537)
233 PRK05605 long-chain-fatty-acid 68.5 35 0.00075 32.9 9.2 83 41-126 239-324 (573)
234 KOG1175 Acyl-CoA synthetase [L 68.0 15 0.00032 35.8 6.2 70 59-128 275-347 (626)
235 PRK12582 acyl-CoA synthetase; 67.3 44 0.00095 32.7 9.7 83 41-126 240-330 (624)
236 PF01041 DegT_DnrJ_EryC1: DegT 65.9 20 0.00043 32.5 6.5 64 51-118 51-119 (363)
237 PTZ00216 acyl-CoA synthetase; 65.5 30 0.00065 34.5 8.2 83 41-127 284-376 (700)
238 PRK06710 long-chain-fatty-acid 65.3 68 0.0015 30.8 10.4 80 41-123 226-308 (563)
239 PRK08974 long-chain-fatty-acid 64.7 62 0.0014 31.0 10.1 81 41-121 226-308 (560)
240 PRK05677 long-chain-fatty-acid 64.6 70 0.0015 30.7 10.4 94 28-122 205-310 (562)
241 PRK08751 putative long-chain f 63.6 35 0.00076 32.7 8.1 81 41-121 228-312 (560)
242 COG0399 WecE Predicted pyridox 63.4 24 0.00052 32.1 6.4 65 50-118 59-128 (374)
243 PRK09192 acyl-CoA synthetase; 61.5 56 0.0012 31.5 9.2 77 40-118 195-276 (579)
244 PRK09029 O-succinylbenzoic aci 60.9 75 0.0016 29.5 9.6 54 40-96 154-208 (458)
245 PF09580 Spore_YhcN_YlaJ: Spor 60.1 33 0.00072 27.3 6.2 50 235-294 77-126 (177)
246 TIGR03205 pimA dicarboxylate-- 58.4 97 0.0021 29.5 10.1 82 41-123 212-297 (541)
247 PRK11706 TDP-4-oxo-6-deoxy-D-g 58.3 57 0.0012 29.6 8.1 56 59-118 65-125 (375)
248 PRK10877 protein disulfide iso 56.7 1.2E+02 0.0026 25.5 9.2 90 205-312 55-147 (232)
249 PRK05850 acyl-CoA synthetase; 56.1 97 0.0021 29.8 9.8 76 41-116 180-263 (578)
250 PRK07445 O-succinylbenzoic aci 56.0 80 0.0017 29.5 8.9 65 28-96 118-192 (452)
251 TIGR02379 ECA_wecE TDP-4-keto- 56.0 56 0.0012 29.8 7.6 58 57-118 63-125 (376)
252 PLN02387 long-chain-fatty-acid 53.4 69 0.0015 31.9 8.4 85 41-127 270-362 (696)
253 PF00036 EF-hand_1: EF hand; 52.6 14 0.00031 19.6 1.9 22 308-329 8-29 (29)
254 PRK11761 cysM cysteine synthas 51.5 1.4E+02 0.003 26.2 9.1 87 31-120 28-117 (296)
255 TIGR03588 PseC UDP-4-keto-6-de 51.2 1E+02 0.0022 28.0 8.5 65 51-118 55-127 (380)
256 PRK13390 acyl-CoA synthetase; 50.9 78 0.0017 29.8 8.0 64 59-123 189-253 (501)
257 TIGR02898 spore_YhcN_YlaJ spor 50.6 97 0.0021 24.4 7.0 53 236-296 57-109 (158)
258 PRK11658 UDP-4-amino-4-deoxy-L 49.4 83 0.0018 28.6 7.7 63 51-117 59-126 (379)
259 PLN02565 cysteine synthase 48.7 2E+02 0.0043 25.6 10.1 91 31-121 31-122 (322)
260 cd01019 ZnuA Zinc binding prot 48.5 1.1E+02 0.0024 26.6 8.0 86 43-128 156-244 (286)
261 COG1020 EntF Non-ribosomal pep 48.4 1.3E+02 0.0028 29.4 9.4 78 40-120 385-465 (642)
262 PRK08276 long-chain-fatty-acid 48.0 91 0.002 29.3 8.0 62 62-124 184-246 (502)
263 PRK13237 tyrosine phenol-lyase 47.4 1.5E+02 0.0033 27.8 8.9 50 59-112 111-174 (460)
264 KOG1138 Predicted cleavage and 46.4 1E+02 0.0022 29.1 7.4 100 20-126 379-480 (653)
265 cd01445 TST_Repeats Thiosulfat 45.7 71 0.0015 24.3 5.6 47 51-97 81-131 (138)
266 COG2236 Predicted phosphoribos 45.1 41 0.00088 27.4 4.3 32 40-71 6-37 (192)
267 PRK06702 O-acetylhomoserine am 44.7 1.4E+02 0.0031 27.9 8.4 56 62-118 97-153 (432)
268 PRK07059 Long-chain-fatty-acid 43.2 2.1E+02 0.0046 27.3 9.8 81 41-121 224-310 (557)
269 KOG0257 Kynurenine aminotransf 43.1 2.5E+02 0.0054 25.9 9.2 87 15-101 43-129 (420)
270 COG1021 EntE Peptide arylation 43.1 47 0.001 30.5 4.7 13 281-293 447-459 (542)
271 cd01016 TroA Metal binding pro 42.7 1.5E+02 0.0033 25.6 7.9 85 45-129 138-227 (276)
272 cd01017 AdcA Metal binding pro 42.3 1.5E+02 0.0032 25.7 7.8 83 44-127 149-235 (282)
273 PLN02556 cysteine synthase/L-3 42.0 2.1E+02 0.0046 26.0 9.0 62 59-120 103-165 (368)
274 TIGR03590 PseG pseudaminic aci 41.3 2.2E+02 0.0048 24.6 8.7 79 36-121 7-89 (279)
275 PRK15407 lipopolysaccharide bi 41.2 1.6E+02 0.0034 27.6 8.2 56 60-119 106-166 (438)
276 cd00754 MoaD Ubiquitin domain 39.0 1.2E+02 0.0025 20.2 5.4 46 14-74 25-77 (80)
277 cd01137 PsaA Metal binding pro 38.7 2.1E+02 0.0046 24.9 8.2 84 44-127 153-241 (287)
278 PRK09545 znuA high-affinity zi 37.9 1.9E+02 0.0041 25.6 7.9 84 43-127 180-267 (311)
279 PRK10696 tRNA 2-thiocytidine b 37.8 2.6E+02 0.0056 23.9 10.3 73 49-121 12-96 (258)
280 TIGR02080 O_succ_thio_ly O-suc 37.5 2E+02 0.0044 26.2 8.2 22 234-255 257-278 (382)
281 PLN02550 threonine dehydratase 37.4 4.1E+02 0.0088 26.1 10.4 96 25-125 119-216 (591)
282 PRK10717 cysteine synthase A; 37.1 3E+02 0.0065 24.4 9.2 64 57-121 55-119 (330)
283 PF00403 HMA: Heavy-metal-asso 37.0 1.1E+02 0.0023 19.2 5.8 46 235-292 13-58 (62)
284 PRK10595 SOS cell division inh 36.9 1.8E+02 0.0039 23.1 6.6 65 54-118 70-140 (164)
285 PF09269 DUF1967: Domain of un 36.6 41 0.00088 22.2 2.6 24 47-70 39-62 (69)
286 COG0031 CysK Cysteine synthase 36.5 3E+02 0.0065 24.3 8.9 61 58-120 54-116 (300)
287 PF01297 TroA: Periplasmic sol 36.5 83 0.0018 26.7 5.3 84 43-127 127-214 (256)
288 PLN03013 cysteine synthase 36.4 3E+02 0.0066 25.7 9.1 69 53-121 161-230 (429)
289 PLN00011 cysteine synthase 36.1 3.1E+02 0.0068 24.3 9.3 70 51-121 53-124 (323)
290 TIGR03595 Obg_CgtA_exten Obg f 35.7 49 0.0011 21.9 2.9 19 53-71 45-63 (69)
291 PRK05939 hypothetical protein; 35.6 2E+02 0.0043 26.5 7.9 55 62-118 83-137 (397)
292 PRK11657 dsbG disulfide isomer 35.3 2.2E+02 0.0049 24.2 7.6 34 205-241 58-91 (251)
293 PRK08574 cystathionine gamma-s 35.3 2.2E+02 0.0048 26.0 8.1 24 234-257 258-281 (385)
294 PLN02330 4-coumarate--CoA liga 35.1 3.5E+02 0.0076 25.7 9.9 79 41-123 204-286 (546)
295 TIGR00936 ahcY adenosylhomocys 34.8 2.7E+02 0.0059 25.8 8.5 66 52-117 19-86 (406)
296 PF00682 HMGL-like: HMGL-like 34.2 1.9E+02 0.0041 24.1 7.1 73 15-93 137-210 (237)
297 PRK15400 lysine decarboxylase 33.6 1.8E+02 0.0038 29.2 7.4 60 62-124 232-310 (714)
298 cd07944 DRE_TIM_HOA_like 4-hyd 33.3 2.9E+02 0.0063 23.7 8.1 75 14-93 137-212 (266)
299 cd06448 L-Ser-dehyd Serine deh 32.9 3.5E+02 0.0076 23.9 9.6 62 59-121 45-106 (316)
300 PF02887 PK_C: Pyruvate kinase 32.8 1.8E+02 0.0038 21.3 5.9 54 21-74 30-102 (117)
301 TIGR01137 cysta_beta cystathio 32.5 4.2E+02 0.009 24.7 9.7 89 31-120 27-116 (454)
302 PF01436 NHL: NHL repeat; Int 32.3 80 0.0017 16.4 3.7 19 209-227 8-26 (28)
303 TIGR00649 MG423 conserved hypo 32.0 3.1E+02 0.0067 25.4 8.6 63 61-123 315-386 (422)
304 PRK14807 histidinol-phosphate 31.9 3.1E+02 0.0067 24.5 8.4 54 62-118 97-154 (351)
305 COG1064 AdhP Zn-dependent alco 31.9 1.8E+02 0.0039 26.2 6.6 60 57-120 159-218 (339)
306 PLN02356 phosphateglycerate ki 31.3 3.9E+02 0.0085 24.9 8.9 71 49-120 87-158 (423)
307 PRK05973 replicative DNA helic 30.6 1.7E+02 0.0038 24.7 6.1 89 15-113 23-116 (237)
308 PLN02409 serine--glyoxylate am 30.4 4.3E+02 0.0092 24.2 9.7 13 281-293 317-329 (401)
309 cd07050 BMC_EutL_repeat2 ethan 30.2 89 0.0019 21.3 3.3 38 54-91 3-41 (87)
310 TIGR01139 cysK cysteine syntha 29.4 3.8E+02 0.0083 23.3 10.0 91 31-122 22-113 (298)
311 cd00615 Orn_deC_like Ornithine 29.1 2.9E+02 0.0062 24.0 7.6 55 62-119 96-161 (294)
312 PF13580 SIS_2: SIS domain; PD 28.8 1.9E+02 0.0042 21.8 5.7 48 48-95 86-136 (138)
313 TIGR01136 cysKM cysteine synth 28.8 3.9E+02 0.0085 23.3 9.4 88 31-121 23-113 (299)
314 cd00378 SHMT Serine-glycine hy 28.4 1.6E+02 0.0035 26.8 6.1 59 62-120 102-169 (402)
315 COG2062 SixA Phosphohistidine 28.0 3E+02 0.0064 21.8 6.6 91 21-113 6-99 (163)
316 PRK11493 sseA 3-mercaptopyruva 27.8 1.1E+02 0.0025 26.4 4.7 51 41-91 202-257 (281)
317 cd01018 ZntC Metal binding pro 27.5 3.1E+02 0.0067 23.5 7.4 82 43-127 147-232 (266)
318 KOG0387 Transcription-coupled 27.1 4.5E+02 0.0098 26.7 8.7 102 48-166 530-633 (923)
319 PRK07503 methionine gamma-lyas 26.7 3.9E+02 0.0085 24.5 8.3 55 62-118 101-156 (403)
320 PRK08195 4-hyroxy-2-oxovalerat 26.6 3.1E+02 0.0067 24.6 7.3 96 14-114 143-247 (337)
321 PF13405 EF-hand_6: EF-hand do 26.6 64 0.0014 17.0 1.9 19 309-327 9-27 (31)
322 PF10411 DsbC_N: Disulfide bon 26.4 61 0.0013 20.4 2.1 19 204-222 32-50 (57)
323 PRK08045 cystathionine gamma-s 26.1 4.3E+02 0.0094 24.1 8.4 24 234-257 258-281 (386)
324 PRK04870 histidinol-phosphate 26.1 4.6E+02 0.01 23.3 8.6 54 63-119 103-160 (356)
325 COG2805 PilT Tfp pilus assembl 26.0 4.8E+02 0.01 23.3 8.4 104 5-109 130-244 (353)
326 cd07939 DRE_TIM_NifV Streptomy 26.0 3.1E+02 0.0067 23.4 7.0 92 16-114 140-241 (259)
327 PRK06381 threonine synthase; V 25.9 4.6E+02 0.01 23.1 10.3 90 30-123 31-120 (319)
328 TIGR02618 tyr_phenol_ly tyrosi 25.7 5E+02 0.011 24.4 8.6 67 41-112 71-167 (450)
329 cd06451 AGAT_like Alanine-glyo 25.5 4.8E+02 0.01 23.1 9.4 55 63-118 72-130 (356)
330 TIGR02803 ExbD_1 TonB system t 25.2 2.2E+02 0.0047 21.0 5.2 28 64-91 84-114 (122)
331 TIGR00623 sula cell division i 25.1 2.6E+02 0.0057 22.2 5.7 17 102-118 100-116 (168)
332 cd07941 DRE_TIM_LeuA3 Desulfob 25.0 3.6E+02 0.0078 23.2 7.3 71 17-93 153-224 (273)
333 PRK08960 hypothetical protein; 24.9 3.5E+02 0.0075 24.5 7.6 13 63-75 114-126 (387)
334 cd01449 TST_Repeat_2 Thiosulfa 24.7 2E+02 0.0043 20.7 5.0 40 51-90 64-103 (118)
335 PRK09162 hypoxanthine-guanine 24.7 2.4E+02 0.0053 22.6 5.8 44 39-84 15-59 (181)
336 COG4669 EscJ Type III secretor 24.6 4.4E+02 0.0095 22.4 7.5 64 236-301 112-182 (246)
337 KOG0391 SNF2 family DNA-depend 24.3 2.2E+02 0.0048 30.4 6.3 99 49-164 1261-1360(1958)
338 KOG0025 Zn2+-binding dehydroge 24.2 3E+02 0.0065 24.3 6.3 64 61-124 157-221 (354)
339 smart00054 EFh EF-hand, calciu 24.2 60 0.0013 15.5 1.5 22 307-328 7-28 (29)
340 PRK15399 lysine decarboxylase 24.1 3.1E+02 0.0067 27.6 7.3 59 62-123 232-309 (713)
341 KOG0633 Histidinol phosphate a 24.1 77 0.0017 27.3 2.7 67 54-120 99-168 (375)
342 cd02070 corrinoid_protein_B12- 24.0 4E+02 0.0086 21.7 10.9 87 38-124 48-145 (201)
343 COG2221 DsrA Dissimilatory sul 24.0 80 0.0017 27.9 2.9 90 206-305 52-142 (317)
344 PF08479 POTRA_2: POTRA domain 24.0 1.2E+02 0.0027 20.1 3.4 27 37-63 27-53 (76)
345 COG2885 OmpA Outer membrane pr 23.9 3.1E+02 0.0067 22.0 6.4 56 15-71 99-160 (190)
346 PRK06234 methionine gamma-lyas 23.8 5.3E+02 0.011 23.7 8.5 55 62-118 100-155 (400)
347 PF08845 SymE_toxin: Toxin Sym 23.8 84 0.0018 19.9 2.3 22 53-74 29-50 (57)
348 TIGR01279 DPOR_bchN light-inde 23.2 6E+02 0.013 23.4 9.8 93 10-114 229-323 (407)
349 PF01514 YscJ_FliF: Secretory 23.1 4E+02 0.0087 21.9 6.9 69 236-307 118-193 (206)
350 PRK07476 eutB threonine dehydr 23.1 5.3E+02 0.011 22.8 9.2 44 81-124 82-125 (322)
351 cd07940 DRE_TIM_IPMS 2-isoprop 22.7 4.1E+02 0.0089 22.7 7.2 93 16-112 144-245 (268)
352 TIGR03217 4OH_2_O_val_ald 4-hy 22.7 4.4E+02 0.0095 23.6 7.5 94 15-113 143-245 (333)
353 cd01561 CBS_like CBS_like: Thi 22.5 5.1E+02 0.011 22.4 10.5 66 56-122 43-109 (291)
354 TIGR01138 cysM cysteine syntha 22.4 5.2E+02 0.011 22.5 10.3 90 30-120 23-113 (290)
355 PRK09177 xanthine-guanine phos 22.3 3.3E+02 0.0071 21.2 5.9 39 41-81 10-48 (156)
356 PF00464 SHMT: Serine hydroxym 22.3 2.6E+02 0.0057 25.8 6.1 61 63-123 108-180 (399)
357 cd07943 DRE_TIM_HOA 4-hydroxy- 22.3 4.4E+02 0.0095 22.5 7.3 93 15-113 141-242 (263)
358 PRK11858 aksA trans-homoaconit 22.2 4.4E+02 0.0095 24.1 7.6 73 14-93 144-217 (378)
359 PRK06382 threonine dehydratase 21.8 6.4E+02 0.014 23.2 9.4 44 81-124 88-131 (406)
360 PF03790 KNOX1: KNOX1 domain ; 21.8 80 0.0017 18.9 1.8 21 72-92 10-30 (45)
361 PRK09331 Sep-tRNA:Cys-tRNA syn 21.8 5.7E+02 0.012 23.2 8.3 55 62-119 99-165 (387)
362 PRK08248 O-acetylhomoserine am 21.7 5.2E+02 0.011 24.1 8.1 55 62-118 100-155 (431)
363 PRK15481 transcriptional regul 21.6 6E+02 0.013 23.4 8.6 53 63-119 163-218 (431)
364 KOG2631 Class II aldolase/addu 21.4 2.8E+02 0.0061 22.9 5.3 49 17-65 169-228 (238)
365 TIGR02822 adh_fam_2 zinc-bindi 21.4 5.2E+02 0.011 22.8 7.8 57 58-118 159-215 (329)
366 PLN02368 alanine transaminase 21.4 6E+02 0.013 23.4 8.4 65 50-117 113-181 (407)
367 KOG0330 ATP-dependent RNA heli 21.3 2.3E+02 0.0049 26.1 5.2 57 64-120 299-358 (476)
368 cd06410 PB1_UP2 Uncharacterize 21.3 3.1E+02 0.0068 19.5 6.5 62 210-274 11-72 (97)
369 TIGR02326 transamin_PhnW 2-ami 21.1 5.9E+02 0.013 22.6 8.9 76 42-119 32-108 (363)
370 cd06451 AGAT_like Alanine-glyo 21.1 5.8E+02 0.013 22.5 9.4 77 42-119 26-104 (356)
371 TIGR03392 FeS_syn_CsdA cystein 21.0 6.1E+02 0.013 22.9 8.4 11 282-292 334-344 (398)
372 PRK08134 O-acetylhomoserine am 20.9 6.4E+02 0.014 23.5 8.5 19 235-253 303-321 (433)
373 cd02069 methionine_synthase_B1 20.8 4.9E+02 0.011 21.5 11.4 86 38-124 52-151 (213)
374 KOG2713 Mitochondrial tryptoph 20.6 2.7E+02 0.0058 24.4 5.3 44 44-87 68-113 (347)
375 PRK02261 methylaspartate mutas 20.5 3.9E+02 0.0084 20.3 8.6 59 65-123 4-65 (137)
376 PF13202 EF-hand_5: EF hand; P 20.5 96 0.0021 15.6 1.7 18 308-325 7-24 (25)
377 KOG0640 mRNA cleavage stimulat 20.2 3.5E+02 0.0075 24.0 5.9 49 208-258 267-316 (430)
378 PRK07050 cystathionine beta-ly 20.2 5.8E+02 0.013 23.4 8.0 18 236-253 273-290 (394)
379 PRK15029 arginine decarboxylas 20.1 3.9E+02 0.0084 27.1 7.2 60 62-124 242-325 (755)
380 PRK00011 glyA serine hydroxyme 20.0 2.6E+02 0.0055 25.7 5.8 58 62-119 108-172 (416)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.7e-55 Score=400.86 Aligned_cols=311 Identities=47% Similarity=0.750 Sum_probs=274.7
Q ss_pred CCCCCCHHHHHHHHHHhcCCC-cEEEeCC---eeecHHHHHHHHHHHHHHHHHcC--CCCCCEEEEECCCCHHHHHHHHH
Q 048729 11 NSTPLTTLGFLERAAAAYTDC-PSLVYNN---TTYTWSETHRRCLQVASSLSSVG--IQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~-~a~~~~~---~~~T~~el~~~~~~~a~~L~~~g--~~~gd~V~~~~~~~~~~~~~~la 84 (330)
+..+.+..-.+.+.+..++++ +.+++.. ..+||+|+++++.++|.+|.+.| +++||+|++++||++++....||
T Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la 91 (537)
T KOG1176|consen 12 NNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALA 91 (537)
T ss_pred cCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 334444444444455455555 7888754 89999999999999999999776 89999999999999999999999
Q ss_pred hhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhccCc------------------------------
Q 048729 85 VPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSLFP------------------------------ 134 (330)
Q Consensus 85 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------------------------------ 134 (330)
|+.+|+++.++++.+.+.++.++++.++++++|++......+........
T Consensus 92 ~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 171 (537)
T KOG1176|consen 92 VPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMP 171 (537)
T ss_pred HHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccc
Confidence 99999999999999999999999999999999999887776644331100
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 172 ~~~~~~~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~ 251 (537)
T KOG1176|consen 172 EGLPDGIRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGG 251 (537)
T ss_pred cCCCcccccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 252 ~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~ 331 (537)
T KOG1176|consen 252 TTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQG 331 (537)
T ss_pred ceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEe
Confidence
Q ss_pred -------------hHH--HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCC
Q 048729 135 -------------QRA--RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDN 199 (330)
Q Consensus 135 -------------~~~--~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 199 (330)
... ..+.+.|.++.|. +..+.++ +|+.++++ +.|||+++|+.++.||+++|+.|++.|+++
T Consensus 332 YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~-~~~v~~e-~g~~l~~~--~~GEI~vrg~~imkGY~~NpeaT~~~~~~~ 407 (537)
T KOG1176|consen 332 YGMTEAGGLITSNDWGPERKPGSVGRLLPGV-RVKVLDE-TGVSLGPN--QTGEICVRGPQVMKGYLKNPEATKEAFDDD 407 (537)
T ss_pred eccccccCceeecCCCccCcccccCccccce-EEEeeCC-CCCCCCCC--CceEEEEECcccchhhcCChHHHHhhcccC
Confidence 111 3567777777764 6666666 99999999 889999999999999999999999999977
Q ss_pred CeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC
Q 048729 200 GWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK 279 (330)
Q Consensus 200 g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 279 (330)
|||+|||+|+.|+||++++++|.+|+||.+|++|+|.|||++|..||.|.||+|++.+++.+|+.++|+|+.+++..
T Consensus 408 GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~--- 484 (537)
T KOG1176|consen 408 GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGST--- 484 (537)
T ss_pred CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999777
Q ss_pred CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 280 KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 280 ~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+.+++.+++++++++|++|..++|+++||+|++||+.|+.|++.+.++
T Consensus 485 -lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 485 -LTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred -CCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999765
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-51 Score=358.62 Aligned_cols=319 Identities=31% Similarity=0.457 Sum_probs=286.9
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Q 048729 4 LLLPNSANSTPLTTLGFLERAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 81 (330)
Q Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~ 81 (330)
...+...+....|+.+.+...++..||+.|.++. +.++||+|+.+.++++|..|.++|+++||||++..||+.+|+.+
T Consensus 39 ~~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~ 118 (596)
T KOG1177|consen 39 VHGCSQIPLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLC 118 (596)
T ss_pred cCCCCCCCcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHH
Confidence 3566777899999999999999999999999984 56799999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHH-----HHHHhccCc----------------------
Q 048729 82 QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL-----LLEALSLFP---------------------- 134 (330)
Q Consensus 82 ~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~---------------------- 134 (330)
.|||.++|.++++++|.+...+++..|++.+++++|+.+.+... +.+......
T Consensus 119 ~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 119 QLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred HHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 99999999999999999999999999999999999998754432 222111111
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 199 ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i 278 (596)
T KOG1177|consen 199 EDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRI 278 (596)
T ss_pred CCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEE
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 279 ~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vig 358 (596)
T KOG1177|consen 279 CIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIG 358 (596)
T ss_pred EecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeC
Confidence
Q ss_pred -----------------------------------------hHHHHhhccCCcccCceeEEEeCCCCCcccCCCCceecE
Q 048729 135 -----------------------------------------QRARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGE 173 (330)
Q Consensus 135 -----------------------------------------~~~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Ge 173 (330)
.......+.|..+.+. |..++|. .|.+++-+ ..||
T Consensus 359 Ga~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~-Ea~iv~~-~g~~v~~~--~~Ge 434 (596)
T KOG1177|consen 359 GAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHY-EAAIVDK-DGSEVPLG--TKGE 434 (596)
T ss_pred CCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccc-ccccccC-CCCccccC--CCce
Confidence 3344556667667775 7888896 99999999 7799
Q ss_pred EEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEE
Q 048729 174 VVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAV 253 (330)
Q Consensus 174 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v 253 (330)
|+++|++.+.|||++++.+.+....|.||+|||++.+|++|.++++||.+|+|+.+|++|+|.+||+.|.+||.|.++.|
T Consensus 435 l~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~V 514 (596)
T KOG1177|consen 435 LLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHV 514 (596)
T ss_pred EEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEE
Confidence 99999999999999999999888879999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 254 VARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++|+..++.+||+|-+..+.... .+.++|+.+|+.++.++.+|++|+++++||+|-+|||+|-+++++.+.
T Consensus 515 VGV~D~R~GE~VCA~vRLqe~~e~~--~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~ 587 (596)
T KOG1177|consen 515 VGVPDERLGEEVCACVRLQEGAEGK--TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKG 587 (596)
T ss_pred EccCCCcccceEEEEEEeecccccc--ccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHHh
Confidence 9999999999999999999887532 588999999999999999999999999999999999999999998863
No 3
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-52 Score=354.22 Aligned_cols=309 Identities=29% Similarity=0.450 Sum_probs=279.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
+...|+.+.+.+.++++||++|+++.++.+||+||.+++.++|..|+..|+++||+|.+-+||..++++.+||++++|+.
T Consensus 25 W~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~ 104 (542)
T COG1021 25 WQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVA 104 (542)
T ss_pred ccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccch----HHHHH-HhccCc--------------------------------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHT----YLLLE-ALSLFP-------------------------------- 134 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~----~~~~~-~~~~~~-------------------------------- 134 (330)
++.--+.....++.++....+++.++.+.... +.+.. .....+
T Consensus 105 PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~~~a~ 184 (542)
T COG1021 105 PVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLFTPAP 184 (542)
T ss_pred hhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccCCcCC
Confidence 98777777788999999999999988764211 11111 111000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 185 ~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~ 264 (542)
T COG1021 185 PADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAP 264 (542)
T ss_pred CCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 265 ~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLv 344 (542)
T COG1021 265 DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLV 344 (542)
T ss_pred CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhh
Confidence
Q ss_pred -------hHHHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCce
Q 048729 135 -------QRARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDI 207 (330)
Q Consensus 135 -------~~~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~ 207 (330)
..+....+.|+|+-..-|++|+|. +|+++.+| +.|+|..+||+-.+||+..|+.+...|+.+|||+|||+
T Consensus 345 nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~ 421 (542)
T COG1021 345 NYTRLDDPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDL 421 (542)
T ss_pred cccccCCchHheeecCCCcCCCcceeEEecC-CCCCCCCC--CcceeeecCCeeeeeeccCchhhhhccCcCCceecCce
Confidence 344556778999977679999999 99999999 99999999999999999999999999999999999999
Q ss_pred EEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHH
Q 048729 208 GVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEII 287 (330)
Q Consensus 208 ~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 287 (330)
+++|++|++.+.||.+|+|+..|++|...+||+.|..||.|.+++++..++...|++.|++|+.++.. ....+++
T Consensus 422 V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~-----~~~~qlr 496 (542)
T COG1021 422 VRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPP-----LRAAQLR 496 (542)
T ss_pred eEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCC-----CCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998875 5789999
Q ss_pred HHHHhc-CCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 288 EYCRAR-LPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 288 ~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+++++. +..|++|++|.++++||.|+-|||||++|++++..
T Consensus 497 ~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 497 RFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhh
Confidence 999775 89999999999999999999999999999998764
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-49 Score=376.30 Aligned_cols=313 Identities=36% Similarity=0.575 Sum_probs=277.6
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCee--ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTT--YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~--~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
......++.+++.+.+..+|+++|+++.+.. +||+||.+++.++|++|.+.|+++||+|+++++|+++++.++|||++
T Consensus 6 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~ 85 (534)
T COG0318 6 RMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALR 85 (534)
T ss_pred cccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3455689999999999999999999998877 99999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc---------------------------c--------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS---------------------------L-------- 132 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~---------------------------~-------- 132 (330)
+|++++|+++.+...++.++++..+++.+++...+...+..... .
T Consensus 86 ~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (534)
T COG0318 86 AGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDADA 165 (534)
T ss_pred cCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCccccc
Confidence 99999999999999999999999999999998652221111100 0
Q ss_pred --C-c---------------------------------------------------------------------------
Q 048729 133 --F-P--------------------------------------------------------------------------- 134 (330)
Q Consensus 133 --~-~--------------------------------------------------------------------------- 134 (330)
. +
T Consensus 166 ~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~ 245 (534)
T COG0318 166 RPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVL 245 (534)
T ss_pred CCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEe
Confidence 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 246 ~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG 325 (534)
T COG0318 246 LSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYG 325 (534)
T ss_pred CCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeec
Confidence
Q ss_pred -------------hH-HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCC
Q 048729 135 -------------QR-ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNG 200 (330)
Q Consensus 135 -------------~~-~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g 200 (330)
.. .....+.|.+++|. +++|+|++++.++| + ++|||+++||+++.|||++|+.+...|..+|
T Consensus 326 ~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei~irgp~v~~GY~~~pe~t~~~f~~~g 401 (534)
T COG0318 326 LTETSPVVTINPPDDLLAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEIWVRGPNVMKGYWNRPEATAEAFDEDG 401 (534)
T ss_pred ccccCceeecCCCchhhhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEEEEECchhhhhhcCChHHHHHhhccCC
Confidence 11 12455568999996 99999985665666 5 7899999999999999999999998887559
Q ss_pred eEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCC
Q 048729 201 WFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKK 280 (330)
Q Consensus 201 ~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 280 (330)
||+|||+|++|++|++++.||.+|+|+++|++|+|.+||+++.+||.|.+++|++.+++.++++++++++++++.. ..
T Consensus 402 W~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~--~~ 479 (534)
T COG0318 402 WLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGD--AE 479 (534)
T ss_pred eeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998742 11
Q ss_pred CCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 281 PTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 281 ~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+.+++.+.++.+++.+.+|+.+++++++|+|++||++|+.|++.+..
T Consensus 480 ~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 480 LTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 478999999999999999999999999999999999999999998864
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.1e-48 Score=358.93 Aligned_cols=299 Identities=30% Similarity=0.437 Sum_probs=260.4
Q ss_pred HHHHHHH-hcCCCcEEEeCC-----eeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 20 FLERAAA-AYTDCPSLVYNN-----TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 20 ~l~~~~~-~~p~~~a~~~~~-----~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
.+.+... ..+|++|+++.+ +++||+||++.++++|+.|++ .|+ +||||++++|+.++.++++|||+++||++
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 3555554 347899999853 679999999999999999985 678 99999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHH---------HHHHhc---------------------cC-----c---
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL---------LLEALS---------------------LF-----P--- 134 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~~~~~~---------------------~~-----~--- 134 (330)
+|+.+.++++.+...+++.+++++++.+..... +..... .. .
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~~~~~~~~~~~d 172 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASEKFEFEPLPADD 172 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCCCCCccccCCCC
Confidence 999999999999999999999999987643321 111110 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 173 pl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~ 252 (528)
T COG0365 173 PLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYS 252 (528)
T ss_pred eEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 253 ~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~ 332 (528)
T COG0365 253 PERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFI 332 (528)
T ss_pred HHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCcccc
Confidence
Q ss_pred hH--HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC--cccccccCCchhhhccccCCCeEEeCceEEE
Q 048729 135 QR--ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG--CVTVGYFKDKEATRRCISDNGWFYTGDIGVM 210 (330)
Q Consensus 135 ~~--~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~ 210 (330)
.. .....+.|.|++|. ++.++|++ |++++.+ + |+|+++.+ +++++||++|+...+.|.+. ||.|||.+++
T Consensus 333 ~~~~~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~ 406 (528)
T COG0365 333 AGRPPVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAER 406 (528)
T ss_pred CCCCCcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEE
Confidence 11 11344558999998 99999995 9999998 7 99999987 89999999999998888734 9999999999
Q ss_pred ecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHH
Q 048729 211 HADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYC 290 (330)
Q Consensus 211 ~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l 290 (330)
|+||+++|.||.||+||+.|.|+++.+||+.|.+||.|.|++|++.+++..++.+.+||+++++...+ ...++|.+.+
T Consensus 407 DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~--~L~~ei~~~v 484 (528)
T COG0365 407 DEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN--ELAEEIRRHV 484 (528)
T ss_pred ccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChH--HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999997543 5678888888
Q ss_pred HhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 291 RARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 291 ~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
++.+.++..|+.|.++++||+|.+||+.|+.|++.+.
T Consensus 485 r~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 485 ARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred HhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHh
Confidence 8888889999999999999999999999999999886
No 6
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-48 Score=368.04 Aligned_cols=299 Identities=31% Similarity=0.446 Sum_probs=264.9
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
.++.++|.+.++.+||++|+++.++++||+||.+.++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh---------------------------------cc--Cc-----
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL---------------------------------SL--FP----- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~---------------------------------~~--~~----- 134 (330)
+++.++.+++.++++..+++++++++.....+.... .. ..
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSSTAPLPKPPKP 208 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCCCCCCCCCCC
Confidence 999999999999999999999999876544331110 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 209 ~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~ 288 (549)
T PRK07788 209 GGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATL 288 (549)
T ss_pred CcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHH
Confidence
Q ss_pred ----------------------------------------------------------------------h---------
Q 048729 135 ----------------------------------------------------------------------Q--------- 135 (330)
Q Consensus 135 ----------------------------------------------------------------------~--------- 135 (330)
+
T Consensus 289 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~ 368 (549)
T PRK07788 289 EDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATP 368 (549)
T ss_pred HHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccCh
Confidence 0
Q ss_pred --HHHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecC
Q 048729 136 --RARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHAD 213 (330)
Q Consensus 136 --~~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~ 213 (330)
......++|.|++|. +++++|+ ++++++.+ +.|||+++|++++.||++++... .. +|||+|||++++|++
T Consensus 369 ~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~---~~-~g~~~TGDl~~~~~~ 440 (549)
T PRK07788 369 EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGYTDGRDKQ---II-DGLLSSGDVGYFDED 440 (549)
T ss_pred hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccccCCCccc---cc-CCceecCceEEEcCC
Confidence 011123567777775 7888888 88899887 88999999999999999887652 22 799999999999999
Q ss_pred ceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhc
Q 048729 214 GYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRAR 293 (330)
Q Consensus 214 G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~ 293 (330)
|.+++.||.||+||++|++|+|.+||+.+.++|+|.+++|++..++..+++++++|++.++.. .+.+++.++++++
T Consensus 441 g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~----~~~~~l~~~~~~~ 516 (549)
T PRK07788 441 GLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAA----LDEDAIKDYVRDN 516 (549)
T ss_pred CCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCC----CCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888899999999887654 6789999999999
Q ss_pred CCCCCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 294 LPRYMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 294 l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
|+.|++|..++++++||+|++||++|++|+++
T Consensus 517 l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 517 LARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred hhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999999999999999999999999999864
No 7
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.6e-47 Score=361.63 Aligned_cols=316 Identities=49% Similarity=0.836 Sum_probs=261.9
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
.+.|+.++|.+.++.+|+++|+++.+.++||+||.++++++|++|.+.|+++||+|+++++|+++++..+|||+++|+++
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH----------------------------------------hc-
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA----------------------------------------LS- 131 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----------------------------------------~~- 131 (330)
+|+++.++.+++.++++..+++++++++.....+... ..
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEP 171 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCC
Confidence 9999999999999999999999999865433211100 00
Q ss_pred ----------cCc-------------------------------------------------------------------
Q 048729 132 ----------LFP------------------------------------------------------------------- 134 (330)
Q Consensus 132 ----------~~~------------------------------------------------------------------- 134 (330)
...
T Consensus 172 ~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~ 251 (579)
T PLN03102 172 TPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAAR 251 (579)
T ss_pred CCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHHHHh
Confidence 000
Q ss_pred ---------------------------------------------------------------hHHHHhhccCC---ccc
Q 048729 135 ---------------------------------------------------------------QRARLKARQGV---KTV 148 (330)
Q Consensus 135 ---------------------------------------------------------------~~~~~~~~~G~---~~~ 148 (330)
.........|. ..|
T Consensus 252 g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~g~~i~~~Y 331 (579)
T PLN03102 252 GGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAY 331 (579)
T ss_pred cCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHHcCCeEEeec
Confidence 00000011122 236
Q ss_pred CceeEE--------------------------------------EeCCCCCcccCCCCceecEEEEecCcccccccCCch
Q 048729 149 GLAEVD--------------------------------------VVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKE 190 (330)
Q Consensus 149 g~te~~--------------------------------------i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 190 (330)
|.||.. +.+.+++++++.++++.|||+++|++++.||+++++
T Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~ 411 (579)
T PLN03102 332 GLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPK 411 (579)
T ss_pred CccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCceEEEEECcchhhhhcCChh
Confidence 777642 112123344443322579999999999999999999
Q ss_pred hhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEE
Q 048729 191 ATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVS 270 (330)
Q Consensus 191 ~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 270 (330)
.+...|. +|||+|||+|++|++|++++.||.+|+||++|++|+|.+||+.+.+||.|.+++|++.+++..++.++++|+
T Consensus 412 ~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~ 490 (579)
T PLN03102 412 ATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVV 490 (579)
T ss_pred hhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEE
Confidence 9888887 899999999999999999999999999999999999999999999999999999999999888889999998
Q ss_pred ecCCcccC------CCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 271 LKRDLELT------KKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 271 ~~~~~~~~------~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+..+.... ......++.+.++++|++|++|..+++++++|+|++||++|++|++++.++
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 491 LEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred ecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHHh
Confidence 87654311 001457899999999999999999999999999999999999999998764
No 8
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.5e-47 Score=367.36 Aligned_cols=310 Identities=23% Similarity=0.318 Sum_probs=260.9
Q ss_pred CCCH-HHHHHHHHH-hcCCCcEEEeC------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHh
Q 048729 14 PLTT-LGFLERAAA-AYTDCPSLVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 85 (330)
Q Consensus 14 ~~~~-~~~l~~~~~-~~p~~~a~~~~------~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~ 85 (330)
.+|+ .++|.++++ .+|+++|+++. ++++||+||.+++.++|++|++.|+++||+|++++||++++++++|||
T Consensus 86 ~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~ 165 (666)
T PLN02654 86 KTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLAC 165 (666)
T ss_pred EeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3455 456666665 48999999873 368999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHH---------H----H-------------------------
Q 048729 86 PMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL---------L----L------------------------- 127 (330)
Q Consensus 86 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~----~------------------------- 127 (330)
+++|++++|+++.++++.+..+++..++++++++...... + .
T Consensus 166 ~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (666)
T PLN02654 166 ARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRED 245 (666)
T ss_pred HHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccc
Confidence 9999999999999999999999999999999986542100 0 0
Q ss_pred ------------H---H-hcc-----Cc----------------------------------------------------
Q 048729 128 ------------E---A-LSL-----FP---------------------------------------------------- 134 (330)
Q Consensus 128 ------------~---~-~~~-----~~---------------------------------------------------- 134 (330)
. . ... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 325 (666)
T PLN02654 246 TKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTAD 325 (666)
T ss_pred cccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCC
Confidence 0 0 000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 326 ~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~ 405 (666)
T PLN02654 326 CGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSV 405 (666)
T ss_pred chhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEe
Confidence
Q ss_pred -------hH-----------------------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceec
Q 048729 135 -------QR-----------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLG 172 (330)
Q Consensus 135 -------~~-----------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~G 172 (330)
.. ...++++|.|++|+ +++|+|+ +|++++.+ +.|
T Consensus 406 Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~-~v~i~d~-~g~~~~~~--~~G 481 (666)
T PLN02654 406 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGV-QPVIVDE-KGKEIEGE--CSG 481 (666)
T ss_pred cCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCc-eEEEECC-CCCCCCCC--Cce
Confidence 00 00123467788886 8999998 88888776 789
Q ss_pred EEEEec--CcccccccCCchhhhcccc--CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCc
Q 048729 173 EVVLRG--GCVTVGYFKDKEATRRCIS--DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAV 248 (330)
Q Consensus 173 el~v~~--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v 248 (330)
||++++ |+++.|||++++.+...+. .+|||+|||++++|+||+++++||.||+||++|++|+|.+||++|.+||+|
T Consensus 482 el~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V 561 (666)
T PLN02654 482 YLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 561 (666)
T ss_pred EEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCe
Confidence 999998 6899999999988776553 279999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 249 NEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 249 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+++|++.+++..++.+.++|+++++...+ ....+++.+.++++|+++++|+.|+++++||+|++||++|+.|++.+.+
T Consensus 562 ~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~-~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 562 AEAAVVGIEHEVKGQGIYAFVTLVEGVPYS-EELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred eeEEEEeeEcCCCCeEEEEEEEECCCCCCC-HHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcC
Confidence 999999999998899999999998875411 0223578899999999999999999999999999999999999998754
No 9
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-46 Score=353.38 Aligned_cols=304 Identities=31% Similarity=0.506 Sum_probs=268.2
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
.+.+.|.+.++.+||++|+++.++.+||.||.+.++++|++|. ..|+++||+|+++++|+++++++++|++++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 5789999999999999999999999999999999999999998 479999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhccC-----------------------------c-----------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSLF-----------------------------P----------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-----------------------------~----------- 134 (330)
+++.++++++..+++..+++++++++.....+....... .
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG 162 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIEDRKIDNFVEKNESASFIICYTSGTTG 162 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhhccCCCCCCCCCCCCcEEEEeCCCCCC
Confidence 999999999999999999999998865543322110000 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 163 ~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~ 242 (496)
T PRK06839 163 KPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVV 242 (496)
T ss_pred CCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEE
Confidence
Q ss_pred -------------------------------------hH-------------------------------HHHhhccCCc
Q 048729 135 -------------------------------------QR-------------------------------ARLKARQGVK 146 (330)
Q Consensus 135 -------------------------------------~~-------------------------------~~~~~~~G~~ 146 (330)
.. .....++|.|
T Consensus 243 ~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p 322 (496)
T PRK06839 243 MGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKP 322 (496)
T ss_pred EehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEeeccCCCCCcceEecccccccccCCCCccc
Confidence 00 0112245666
Q ss_pred ccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeE
Q 048729 147 TVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVI 226 (330)
Q Consensus 147 ~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~i 226 (330)
++|. +++|+|+ ++..++.+ +.|||+++|++++.||+++++.+...+. +|||+|||++++|++|.+++.||.+|+|
T Consensus 323 ~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~d~i 397 (496)
T PRK06839 323 VLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEYWNRPDATEETIQ-DGWLCTGDLARVDEDGFVYIVGRKKEMI 397 (496)
T ss_pred CCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhhcCChHHHHHHHc-CCCeeecceEEEcCCCcEEEeccccceE
Confidence 6674 7888887 67778877 8899999999999999999998887776 8999999999999999999999999999
Q ss_pred EeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEc
Q 048729 227 ISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFS 306 (330)
Q Consensus 227 k~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v 306 (330)
|++|.+|+|.+||+.+.++|+|.++++++.+++..++.++++++..++.. ...+++++.++++|+.+++|..++++
T Consensus 398 ~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~P~~~~~v 473 (496)
T PRK06839 398 ISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSV----LIEKDVIEHCRLFLAKYKIPKEIVFL 473 (496)
T ss_pred EECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC----CCHHHHHHHHHhhCcCCCCCcEEEEe
Confidence 99999999999999999999999999999999888889999999887654 66789999999999999999999999
Q ss_pred cCCCCCCCCcccHHHHHHHhhh
Q 048729 307 EELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 307 ~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+++|+|++||++|++|+++.++
T Consensus 474 ~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 474 KELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred ccCCCCccccccHHHHHHHhhc
Confidence 9999999999999999998865
No 10
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.9e-47 Score=364.43 Aligned_cols=309 Identities=20% Similarity=0.304 Sum_probs=255.7
Q ss_pred CHHHHHHHHHHh--cCCCcEEEeC------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 16 TTLGFLERAAAA--YTDCPSLVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 16 ~~~~~l~~~~~~--~p~~~a~~~~------~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
+..+++.+.++. +|+++|+++. .+++||+||.+.+.++|+.|++.|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 345566666654 7999999873 36799999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccc---------hHHH--------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLH---------TYLL-------------------------------- 126 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~---------~~~~-------------------------------- 126 (330)
+|++++|+++.++++.+.+++++.+++++++++.. ...+
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 219 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIE 219 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccccc
Confidence 99999999999999999999999999999985310 0000
Q ss_pred -----------HHHh--------cc------Cc-----------------------------------------------
Q 048729 127 -----------LEAL--------SL------FP----------------------------------------------- 134 (330)
Q Consensus 127 -----------~~~~--------~~------~~----------------------------------------------- 134 (330)
.+.. .. ..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~ 299 (647)
T PTZ00237 220 TIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVV 299 (647)
T ss_pred ccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 0000 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 300 ~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l 379 (647)
T PTZ00237 300 FSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDL 379 (647)
T ss_pred EEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCc
Confidence
Q ss_pred ------------------------------------hHH-----------HHhhccCCcccCceeEEEeCCCCCcccCCC
Q 048729 135 ------------------------------------QRA-----------RLKARQGVKTVGLAEVDVVNPETGESVKRD 167 (330)
Q Consensus 135 ------------------------------------~~~-----------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~ 167 (330)
+.. ....++|.|++|. +++|+|+ +|++++.+
T Consensus 380 ~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~-~~~i~d~-~g~~~~~g 457 (647)
T PTZ00237 380 SNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFI-KPSILSE-DGKELNVN 457 (647)
T ss_pred chheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCc-eEEEECC-CCCCCCCC
Confidence 000 0013456666775 7888887 88889887
Q ss_pred CceecEEEEecC---cccccccCCchhhhccccC-CCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHh
Q 048729 168 GVSLGEVVLRGG---CVTVGYFKDKEATRRCISD-NGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLY 243 (330)
Q Consensus 168 ~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~ 243 (330)
+.|||+++++ +++.|||++++.+.+.|.. +|||+|||+|++|++|+++++||+||+||++|++|+|.+||++|.
T Consensus 458 --e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~ 535 (647)
T PTZ00237 458 --EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL 535 (647)
T ss_pred --CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH
Confidence 8899999986 7899999999988877743 799999999999999999999999999999999999999999999
Q ss_pred cCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC---CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHH
Q 048729 244 SITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK---KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKY 320 (330)
Q Consensus 244 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~ 320 (330)
+||.|.+++|++.+++..++.++++|++.++..... ....+++++.++++|+++++|+.|+++++||+|++||++|+
T Consensus 536 ~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~ 615 (647)
T PTZ00237 536 KHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQ 615 (647)
T ss_pred hCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHH
Confidence 999999999999999988899999999885421100 01235677888999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 048729 321 LLREFAKS 328 (330)
Q Consensus 321 ~l~~~~~~ 328 (330)
.|++++.+
T Consensus 616 ~Lr~~~~~ 623 (647)
T PTZ00237 616 IISKFLND 623 (647)
T ss_pred HHHHHHcC
Confidence 99998753
No 11
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.9e-46 Score=358.02 Aligned_cols=319 Identities=26% Similarity=0.367 Sum_probs=260.3
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
+++.+.++.++|.+.++.+|+++|+++.++++||+||.+.+.++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 46778899999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH---HHH-------------------------HHh-----------
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY---LLL-------------------------EAL----------- 130 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---~~~-------------------------~~~----------- 130 (330)
++++|+++.++.+++.++++..+++++++++.... .+. ...
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 99999999999999999999999999998754211 000 000
Q ss_pred c-----cCc-----------------------------------------------------------------------
Q 048729 131 S-----LFP----------------------------------------------------------------------- 134 (330)
Q Consensus 131 ~-----~~~----------------------------------------------------------------------- 134 (330)
. ...
T Consensus 162 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~ 241 (563)
T PLN02860 162 TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACH 241 (563)
T ss_pred cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceE
Confidence 0 000
Q ss_pred ----------------------------------h----------------------------HHHHhhcc-C---Cccc
Q 048729 135 ----------------------------------Q----------------------------RARLKARQ-G---VKTV 148 (330)
Q Consensus 135 ----------------------------------~----------------------------~~~~~~~~-G---~~~~ 148 (330)
. ...+.... | ...|
T Consensus 242 v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 321 (563)
T PLN02860 242 VLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAY 321 (563)
T ss_pred EecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCC
Confidence 0 00000001 2 2347
Q ss_pred CceeEEE-------eCC--------------------------CCCcccCC--------CCceecEEEEecCcccccccC
Q 048729 149 GLAEVDV-------VNP--------------------------ETGESVKR--------DGVSLGEVVLRGGCVTVGYFK 187 (330)
Q Consensus 149 g~te~~i-------~d~--------------------------~~g~~~~~--------~~~~~Gel~v~~~~~~~gy~~ 187 (330)
|.||+.. -++ .-|++++. +.++.|||+++|++++.|||+
T Consensus 322 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~ 401 (563)
T PLN02860 322 GMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWG 401 (563)
T ss_pred CccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccC
Confidence 7777531 000 01223221 112679999999999999999
Q ss_pred CchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEE
Q 048729 188 DKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCA 267 (330)
Q Consensus 188 ~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 267 (330)
+++.+...+..+|||+|||+|++|++|+++++||.+|+||++|++|+|.+||+.+.+||+|.+++|++.+++..++.+++
T Consensus 402 ~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a 481 (563)
T PLN02860 402 QNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVA 481 (563)
T ss_pred CccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEE
Confidence 99999888877899999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEecCCccc----------CCCCCHHHHHHHHHh-cCCCCCCCceEEEc-cCCCCCCCCcccHHHHHHHhhh
Q 048729 268 FVSLKRDLEL----------TKKPTEKEIIEYCRA-RLPRYMVPRKVVFS-EELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 268 ~v~~~~~~~~----------~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v-~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++.++... ......+++.+++++ +|++|++|..++++ ++||+|++||++|++|++++.+
T Consensus 482 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~ 554 (563)
T PLN02860 482 CVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLS 554 (563)
T ss_pred EEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHH
Confidence 9998765210 011456789999987 59999999998765 6799999999999999998854
No 12
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-46 Score=356.57 Aligned_cols=304 Identities=28% Similarity=0.414 Sum_probs=266.8
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
.|+.++|.+.++.+|+++|+++.++.+||+||.+++.++|++|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 489999999999999999999999999999999999999999996 6999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH---------------------------------------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE--------------------------------------------- 128 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~--------------------------------------------- 128 (330)
|+++.++.+++.++++..++++++++......+..
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQ 183 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCCcc
Confidence 99999999999999999999999874322111000
Q ss_pred ------Hh-----cc------Cc---------------------------------------------------------
Q 048729 129 ------AL-----SL------FP--------------------------------------------------------- 134 (330)
Q Consensus 129 ------~~-----~~------~~--------------------------------------------------------- 134 (330)
.. .. ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h~ 263 (562)
T PRK05677 184 AVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYHI 263 (562)
T ss_pred cccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHHH
Confidence 00 00 00
Q ss_pred ------------------------------------------------------------------------------h-
Q 048729 135 ------------------------------------------------------------------------------Q- 135 (330)
Q Consensus 135 ------------------------------------------------------------------------------~- 135 (330)
.
T Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~ 343 (562)
T PRK05677 264 YAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATA 343 (562)
T ss_pred HHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHH
Confidence 0
Q ss_pred --HHH---------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCccccccc
Q 048729 136 --RAR---------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 186 (330)
Q Consensus 136 --~~~---------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~ 186 (330)
... ...+.|.+++|. +++++|+ ++.+++.+ +.|||+++|+.++.||+
T Consensus 344 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~ 419 (562)
T PRK05677 344 ERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPST-LCKVIDD-DGNELPLG--EVGELCVKGPQVMKGYW 419 (562)
T ss_pred HHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCC-EEEEECC-CCCCCCCC--CCeEEEEecCccchhhc
Confidence 000 113467777775 8888988 78899888 88999999999999999
Q ss_pred CCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeE
Q 048729 187 KDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPC 266 (330)
Q Consensus 187 ~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 266 (330)
++++.+.+.|..+|||+|||+|++|++|.+++.||.+|++|++|.+|+|.+||+.|.++|+|.+++|++.+++..++.++
T Consensus 420 ~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~ 499 (562)
T PRK05677 420 QRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIK 499 (562)
T ss_pred CCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEE
Confidence 99999998887789999999999999999999999999999999999999999999999999999999999887788888
Q ss_pred EEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 267 AFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 267 ~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
+++++.++.. .+.+++.+.++++|++|++|..|+++++||+|++||++|++|++.+
T Consensus 500 ~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~ 555 (562)
T PRK05677 500 VFVVVKPGET----LTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEE 555 (562)
T ss_pred EEEEeCCCCC----CCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHH
Confidence 8888776544 6778999999999999999999999999999999999999999865
No 13
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=4.4e-46 Score=353.93 Aligned_cols=314 Identities=33% Similarity=0.448 Sum_probs=273.4
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Q 048729 5 LLPNSANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la 84 (330)
..+++.+....++.++|.+.++.+||++|+++.++++||+||.+.++++|.+|.+.|+++||+|+++++|++++++.++|
T Consensus 11 ~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA 90 (542)
T PRK06155 11 RAVDPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLG 90 (542)
T ss_pred hhcccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 34566777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc---------------------------------
Q 048729 85 VPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS--------------------------------- 131 (330)
Q Consensus 85 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~--------------------------------- 131 (330)
|+++|++++|+++.++.+++..+++..++++++++......+.....
T Consensus 91 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (542)
T PRK06155 91 CAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDA 170 (542)
T ss_pred HHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCC
Confidence 99999999999999999999999999999999987644332211000
Q ss_pred -----cCc------------------------------------------------------------------------
Q 048729 132 -----LFP------------------------------------------------------------------------ 134 (330)
Q Consensus 132 -----~~~------------------------------------------------------------------------ 134 (330)
...
T Consensus 171 ~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~ 250 (542)
T PRK06155 171 PAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYV 250 (542)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEE
Confidence 000
Q ss_pred ---------------------------------------------------------hHHH-------------------
Q 048729 135 ---------------------------------------------------------QRAR------------------- 138 (330)
Q Consensus 135 ---------------------------------------------------------~~~~------------------- 138 (330)
....
T Consensus 251 ~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~v~~~YG~tE~~ 330 (542)
T PRK06155 251 LEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPGVPAALHAAFRERFGVDLLDGYGSTETN 330 (542)
T ss_pred eeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcCCCHHHHHHHHHHcCCCEEeeecccccC
Confidence 0000
Q ss_pred ----------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC---cccccccCCchhhhccccCCCeEEeC
Q 048729 139 ----------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG---CVTVGYFKDKEATRRCISDNGWFYTG 205 (330)
Q Consensus 139 ----------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~g~~~TG 205 (330)
...+.|.+..|. +++|+|+ ++++++.+ +.|||+++|+ +++.||+++++.+...|. ++||+||
T Consensus 331 ~~~~~~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~-~~~~~TG 405 (542)
T PRK06155 331 FVIAVTHGSQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADEPFAFATGYFGMPEKTVEAWR-NLWFHTG 405 (542)
T ss_pred ccccCCCCCCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCCccccchhhcCCHHHHHHhhc-CCcEecc
Confidence 012344555664 6778887 78888888 7899999998 699999999998888876 8999999
Q ss_pred ceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHH
Q 048729 206 DIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKE 285 (330)
Q Consensus 206 D~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 285 (330)
|+++++++|.++++||.+|++|++|.+|+|.+||+.+.++|+|.+++|++.+++..++.+.+++++..+.. .+..+
T Consensus 406 D~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~----~~~~~ 481 (542)
T PRK06155 406 DRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTA----LEPVA 481 (542)
T ss_pred ceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCC----CCHHH
Confidence 99999999999999999999999999999999999999999999999999998877788888888776654 67899
Q ss_pred HHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 286 IIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 286 l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
+.++++++++.+++|..|.+++++|+|++||++|++|++++-
T Consensus 482 ~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 482 LVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred HHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 999999999999999999999999999999999999998763
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.3e-46 Score=360.63 Aligned_cols=308 Identities=28% Similarity=0.393 Sum_probs=260.5
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
...+.|.++++.+|+++|+++.+ +++||+||.+.+.++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 137 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIG 137 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 44567777888899999998643 589999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH---------H----HHHH---------------------------
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY---------L----LLEA--------------------------- 129 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~----~~~~--------------------------- 129 (330)
++++|+++.++++.+.++++..+++++++++.... . +...
T Consensus 138 av~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (625)
T TIGR02188 138 AIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWW 217 (625)
T ss_pred CEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccH
Confidence 99999999999999999999999999998654210 0 0000
Q ss_pred ------h-cc-----C----c-----------------------------------------------------------
Q 048729 130 ------L-SL-----F----P----------------------------------------------------------- 134 (330)
Q Consensus 130 ------~-~~-----~----~----------------------------------------------------------- 134 (330)
. .. . .
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~ 297 (625)
T TIGR02188 218 HDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIV 297 (625)
T ss_pred HHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHH
Confidence 0 00 0 0
Q ss_pred ----------------------------------------------------------------------------h---
Q 048729 135 ----------------------------------------------------------------------------Q--- 135 (330)
Q Consensus 135 ----------------------------------------------------------------------------~--- 135 (330)
.
T Consensus 298 ~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~ 377 (625)
T TIGR02188 298 YGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMW 377 (625)
T ss_pred HHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHH
Confidence 0
Q ss_pred -H-------------------------------HHHhhccCCcccCceeEEEeCCCCCcccC-CCCceecEEEEec--Cc
Q 048729 136 -R-------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVK-RDGVSLGEVVLRG--GC 180 (330)
Q Consensus 136 -~-------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~-~~~~~~Gel~v~~--~~ 180 (330)
. .....++|.|++|+ +++++|+ +|++++ .+ +.|||+++| ++
T Consensus 378 ~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~-~~~i~d~-~g~~~~~~g--~~GeL~v~~p~p~ 453 (625)
T TIGR02188 378 YYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGI-EPAVVDE-EGNPVEGPG--EGGYLVIKQPWPG 453 (625)
T ss_pred HHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCc-eEEEECC-CCCCCCCCC--CeEEEEEccCCCc
Confidence 0 00123466777776 8888886 888888 67 889999999 58
Q ss_pred ccccccCCchhhhcccc--CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecC
Q 048729 181 VTVGYFKDKEATRRCIS--DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPD 258 (330)
Q Consensus 181 ~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 258 (330)
++.|||++++.+...+. .+|||+|||++++|++|+++++||+||+||++|++|+|.+||++|.+||+|.+++|++.++
T Consensus 454 ~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~ 533 (625)
T TIGR02188 454 MLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPD 533 (625)
T ss_pred ccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEc
Confidence 99999999987766553 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 259 MFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+..++.++++|++.++.... ....+++++.++++|+++++|+.|+++++||+|++||++|+.|++++.+
T Consensus 534 ~~~g~~~~a~vv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 534 DIKGQAIYAFVTLKDGYEPD-DELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAG 602 (625)
T ss_pred CCCCeEEEEEEEeCCCCCCC-HHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcC
Confidence 88889999999988775411 0134789999999999999999999999999999999999999998753
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.8e-46 Score=358.70 Aligned_cols=308 Identities=33% Similarity=0.500 Sum_probs=259.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcEEEe--------CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 11 NSTPLTTLGFLERAAAAYTDCPSLVY--------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~~a~~~--------~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
...+.|+.++|.+.++.+|+++|+++ .++++||+||.+.+.++|++|++.|+++||+|+++++|++++++++
T Consensus 21 ~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 21 RDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred hcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 35567999999999999999999986 3478999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch-----HHHH------------------------------
Q 048729 83 FGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT-----YLLL------------------------------ 127 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~------------------------------ 127 (330)
|||+++| +++|+++.++++.+.++++..+++++++...+. ..+.
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccc
Confidence 9999999 568999999999999999999999999864221 0000
Q ss_pred --------------HHh-----------cc-Cc-----------------------------------------------
Q 048729 128 --------------EAL-----------SL-FP----------------------------------------------- 134 (330)
Q Consensus 128 --------------~~~-----------~~-~~----------------------------------------------- 134 (330)
... .. ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 259 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFC 259 (632)
T ss_pred ccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 000 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 260 ~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v~ 339 (632)
T PRK07529 260 GLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRYAL 339 (632)
T ss_pred ecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEEEE
Confidence
Q ss_pred ---------hH-------------------------------HHHhhccCCcccCceeEEEe--CCCCC---cccCCCCc
Q 048729 135 ---------QR-------------------------------ARLKARQGVKTVGLAEVDVV--NPETG---ESVKRDGV 169 (330)
Q Consensus 135 ---------~~-------------------------------~~~~~~~G~~~~g~te~~i~--d~~~g---~~~~~~~~ 169 (330)
.. .....++|.|+++. +++++ |+ +| ++++.+
T Consensus 340 ~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~-~v~i~~~d~-~g~~~~~~~~g-- 415 (632)
T PRK07529 340 CGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQ-RVRVVILDD-AGRYLRDCAVD-- 415 (632)
T ss_pred EcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCcccccCCc-eEEEEEcCC-CCcccccCCCC--
Confidence 00 01123345555554 56653 44 55 677777
Q ss_pred eecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcc
Q 048729 170 SLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVN 249 (330)
Q Consensus 170 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~ 249 (330)
+.|||+++|++++.||++++. +...+..+|||+|||+|++|++|.+++.||.||+||++|++|+|.+||+.|.+||+|.
T Consensus 416 ~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~ 494 (632)
T PRK07529 416 EVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVA 494 (632)
T ss_pred CceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCee
Confidence 889999999999999998654 4455545899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCC-CCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 250 EAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLP-RYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 250 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+++|++.+++..++.++++|++.++.. .+.+++.++++++++ .+.+|..|+++++||+|++||++|++|++.+..
T Consensus 495 ~a~vvg~~d~~~ge~~~a~v~l~~~~~----~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 495 LAAAVGRPDAHAGELPVAYVQLKPGAS----ATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred EEEEEeccCCCCCceeEEEEEEcCCCC----CCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHH
Confidence 999999999888899999999988765 677899999999986 578999999999999999999999999998753
No 16
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=8e-46 Score=352.04 Aligned_cols=310 Identities=30% Similarity=0.447 Sum_probs=268.3
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
...+++.+++.+.++.+|+++|+++. ++++||.||.+.++++|++|.+.|+++||+|+++++|++++++.++||+++|
T Consensus 20 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G 99 (537)
T PLN02246 20 PNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRG 99 (537)
T ss_pred CCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 33568999999999999999999985 4789999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh--------------------------c-------cC-c-
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL--------------------------S-------LF-P- 134 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--------------------------~-------~~-~- 134 (330)
++++|+++.++.+++..+++..++++++++......+.... . .. +
T Consensus 100 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (537)
T PLN02246 100 AVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQADENELPEVEISPD 179 (537)
T ss_pred EEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhcCCCCCCCCCCCCcc
Confidence 99999999999999999999999999988654333221100 0 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 180 ~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~ 259 (537)
T PLN02246 180 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKF 259 (537)
T ss_pred CEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCC
Confidence
Q ss_pred ------------------------------------------------------hHH-----------------------
Q 048729 135 ------------------------------------------------------QRA----------------------- 137 (330)
Q Consensus 135 ------------------------------------------------------~~~----------------------- 137 (330)
...
T Consensus 260 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 339 (537)
T PLN02246 260 EIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPV 339 (537)
T ss_pred CHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcc
Confidence 000
Q ss_pred -------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEe
Q 048729 138 -------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYT 204 (330)
Q Consensus 138 -------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~T 204 (330)
....++|.++.|. +++++|++++++++.+ +.|||+++|+.++.||+++++.+.+.+..+|||+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~T 416 (537)
T PLN02246 340 LAMCLAFAKEPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHT 416 (537)
T ss_pred cccccccCCCCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEECCchhccccCCchhhhhcccCCCCeee
Confidence 0012345555564 6677776578888888 88999999999999999999999888877899999
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHH
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEK 284 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 284 (330)
||+++++++|.++++||.||++|++|.+|+|.+||+.+.++|+|.+++|++..+...++.++++++..++.. .+.+
T Consensus 417 GD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 492 (537)
T PLN02246 417 GDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSE----ITED 492 (537)
T ss_pred cceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCC----CCHH
Confidence 999999999999999999999999999999999999999999999999999988877888889888776654 5678
Q ss_pred HHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 285 EIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 285 ~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++.++++++.++.|..++++++||+|++||++|++|++++.+
T Consensus 493 ~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 493 EIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred HHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 99999999999999999999999999999999999999998753
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.7e-46 Score=360.16 Aligned_cols=311 Identities=22% Similarity=0.291 Sum_probs=260.7
Q ss_pred CCH-HHHHHHHHHhcCCCcEEEe------CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 15 LTT-LGFLERAAAAYTDCPSLVY------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 15 ~~~-~~~l~~~~~~~p~~~a~~~------~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
.|+ .++|.+.+..+|+++|+++ .++++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~ 130 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACAR 130 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 344 4677778888999999997 236899999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------HHHH-------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT---------YLLL------------------------------- 127 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~------------------------------- 127 (330)
+|++++|+++.++++++.++++..++++++++.... ..+.
T Consensus 131 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 210 (628)
T TIGR02316 131 IGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDV 210 (628)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccc
Confidence 999999999999999999999999999999864210 0000
Q ss_pred ------HH--hcc-----Cc------------------------------------------------------------
Q 048729 128 ------EA--LSL-----FP------------------------------------------------------------ 134 (330)
Q Consensus 128 ------~~--~~~-----~~------------------------------------------------------------ 134 (330)
.. ... ..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~ 290 (628)
T TIGR02316 211 DYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHS 290 (628)
T ss_pred cHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhh
Confidence 00 000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 291 ~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~ 370 (628)
T TIGR02316 291 YIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPT 370 (628)
T ss_pred HHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHH
Confidence
Q ss_pred -hH--------------------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC--
Q 048729 135 -QR--------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG-- 179 (330)
Q Consensus 135 -~~--------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~-- 179 (330)
.. ....++.|.|++|. +++|+|+++|++++.+ +.|||+++||
T Consensus 371 ~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g--~~Gel~v~gp~~ 447 (628)
T TIGR02316 371 AHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN--EKGVLTVVPPLP 447 (628)
T ss_pred HHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC--CcEEEEEecCCC
Confidence 00 00113457788886 8999988679999888 8899999998
Q ss_pred -cccccccCCchhhhccc---cCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEe
Q 048729 180 -CVTVGYFKDKEATRRCI---SDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVA 255 (330)
Q Consensus 180 -~~~~gy~~~~~~~~~~~---~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 255 (330)
+.+.|||++++...+.+ ..++||+|||+|++|+||+++++||.||+||++|++|+|.+||++|.+||+|.+++|++
T Consensus 448 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg 527 (628)
T TIGR02316 448 PGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVG 527 (628)
T ss_pred ccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEe
Confidence 56789999987766544 23679999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeEEEEEecCCcccCC----CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 256 RPDMFWGEIPCAFVSLKRDLELTK----KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 256 ~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+++..++.++++|+++++..... ....+++++.++++|++|++|+.++++++||+|++||++|+.|++.+.+
T Consensus 528 ~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~ 604 (628)
T TIGR02316 528 VHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEG 604 (628)
T ss_pred eecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcC
Confidence 999988899999999876543110 0235789999999999999999999999999999999999999998754
No 18
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-46 Score=349.98 Aligned_cols=301 Identities=23% Similarity=0.401 Sum_probs=263.8
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
|++.++|.++++++|+++|+.+.++++||.||.++++++|++|.+.|. +||+|+++++|+++++.++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 578999999999999999999999999999999999999999998884 8999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH-----------------Hh------ccC----c-------------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE-----------------AL------SLF----P------------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-----------------~~------~~~----~------------- 134 (330)
+++.++++++.++++..++++++++......+.. .. ... .
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK 159 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEIDEWKRMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPK 159 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEehhhhhhhhhccccccccccCCCCcEEEEeCCCCCCCCc
Confidence 9999999999999999999999987632211110 00 000 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 160 gv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 239 (487)
T PRK07638 160 AFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVP 239 (487)
T ss_pred EEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCc
Confidence
Q ss_pred -------------------------------------------------------------hHHHHhhccCCcccCceeE
Q 048729 135 -------------------------------------------------------------QRARLKARQGVKTVGLAEV 153 (330)
Q Consensus 135 -------------------------------------------------------------~~~~~~~~~G~~~~g~te~ 153 (330)
.......+.|.|++|. ++
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~ 318 (487)
T PRK07638 240 TMLESLYKENRVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNV-QV 318 (487)
T ss_pred HHHHHHHhCcCcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCc-EE
Confidence 0001123567788885 89
Q ss_pred EEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeec
Q 048729 154 DVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENI 233 (330)
Q Consensus 154 ~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v 233 (330)
+|+|+ +|.+++.+ +.|||+++|++++.||++++..+...+. +|||+|||++++|++|++++.||.+|+||++|.+|
T Consensus 319 ~i~d~-~g~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v 394 (487)
T PRK07638 319 RICNE-AGEEVQKG--EIGTVYVKSPQFFMGYIIGGVLARELNA-DGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINI 394 (487)
T ss_pred EEECC-CCCCCCCC--CCeEEEEecccceeeecCCHHHHhhhcc-CCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEE
Confidence 99998 89999988 8899999999999999999987766555 89999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCC
Q 048729 234 CSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTS 313 (330)
Q Consensus 234 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~ 313 (330)
+|.+||+.+.++|+|.+++|++..++..++.+.+++.. . ...+++.+.++++++++++|..+++++++|+|+
T Consensus 395 ~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~----~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~ 466 (487)
T PRK07638 395 FPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----S----ATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTN 466 (487)
T ss_pred CHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----C----CCHHHHHHHHHHHhhcccCCcEEEEecccCCCC
Confidence 99999999999999999999999988778888887763 1 567899999999999999999999999999999
Q ss_pred CCcccHHHHHHHhhhc
Q 048729 314 TGKIQKYLLREFAKSV 329 (330)
Q Consensus 314 ~GKv~r~~l~~~~~~~ 329 (330)
+||++|++|++++.+.
T Consensus 467 ~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 467 SGKIARMEAKSWIENQ 482 (487)
T ss_pred cccccHHHHHHHHhcc
Confidence 9999999999998753
No 19
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.8e-46 Score=355.80 Aligned_cols=307 Identities=27% Similarity=0.402 Sum_probs=261.5
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCC--eeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNN--TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~--~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
..++.+.+... +.+|+++|+++.. .++||+||.+++.++|++|.+ .|+++||+|+++++|+.++++.+|||+++|+
T Consensus 39 ~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 39 NLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred CCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 34555555544 6799999999854 479999999999999999998 9999999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------------------------h----cc-----Cc-
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA--------------------------L----SL-----FP- 134 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--------------------------~----~~-----~~- 134 (330)
+++|+++.++.+++.++++..+++++++++.....+... . .. ..
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFDSKRIEFPKFYELIKEDFDFVPKPVIKQ 197 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccccccCccCcccHHHHhhcCCcccccCCCCc
Confidence 999999999999999999999999998865432221100 0 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 198 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 277 (560)
T PLN02574 198 DDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR 277 (560)
T ss_pred CCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec
Confidence
Q ss_pred ---------------------------------------------------------h----HH----------------
Q 048729 135 ---------------------------------------------------------Q----RA---------------- 137 (330)
Q Consensus 135 ---------------------------------------------------------~----~~---------------- 137 (330)
. ..
T Consensus 278 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~ 357 (560)
T PLN02574 278 RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTES 357 (560)
T ss_pred CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEeccccccc
Confidence 0 00
Q ss_pred -------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEe
Q 048729 138 -------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYT 204 (330)
Q Consensus 138 -------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~T 204 (330)
....+.|.+++|. +++|+|+++|++++.+ +.|||+++|++++.||+++++.+.+.|..+|||+|
T Consensus 358 ~~~~~~~~~~~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~T 434 (560)
T PLN02574 358 TAVGTRGFNTEKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRT 434 (560)
T ss_pred CceeecCCCccccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEECcchhhhhcCChhHhhhhccCCCCccc
Confidence 0012345555664 7778886688999888 88999999999999999999999888877999999
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHH
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEK 284 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 284 (330)
||+|++|++|.+++.||.+|+||++|++|++.+||+.|.+||+|.+++|++.+++..++.++++++..++.. .+.+
T Consensus 435 GDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~----~~~~ 510 (560)
T PLN02574 435 GDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGST----LSQE 510 (560)
T ss_pred ceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCC----CCHH
Confidence 999999999999999999999999999999999999999999999999999998887888889988776544 5678
Q ss_pred HHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 285 EIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 285 ~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++.+.++++|++|+.|..+.++++||+|++||++|+.|++++.+
T Consensus 511 ~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 511 AVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTN 554 (560)
T ss_pred HHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998854
No 20
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-45 Score=351.51 Aligned_cols=317 Identities=29% Similarity=0.433 Sum_probs=273.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHh
Q 048729 7 PNSANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGV 85 (330)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~ 85 (330)
|...+.+..|+.++|.+.+..+|+++|+++.++++||+||.+++.++|.+|.+. |+++||+|+++++|++++++.++||
T Consensus 2 ~~~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 81 (546)
T PRK08314 2 PKSLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAI 81 (546)
T ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 456677888999999999999999999999999999999999999999999988 9999999999999999999999999
Q ss_pred hhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh-----------------------------------
Q 048729 86 PMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL----------------------------------- 130 (330)
Q Consensus 86 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~----------------------------------- 130 (330)
+++|++++|+++.++.+++.++++..++++++++......+....
T Consensus 82 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (546)
T PRK08314 82 LRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPL 161 (546)
T ss_pred HHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccccccccccc
Confidence 999999999999999999999999999999998765433221100
Q ss_pred ---------------c-------------cCc------------------------------------------------
Q 048729 131 ---------------S-------------LFP------------------------------------------------ 134 (330)
Q Consensus 131 ---------------~-------------~~~------------------------------------------------ 134 (330)
. ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~ 241 (546)
T PRK08314 162 QALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLF 241 (546)
T ss_pred ccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCch
Confidence 0 000
Q ss_pred -------------------------------------------------------------------------------h
Q 048729 135 -------------------------------------------------------------------------------Q 135 (330)
Q Consensus 135 -------------------------------------------------------------------------------~ 135 (330)
.
T Consensus 242 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~ 321 (546)
T PRK08314 242 HVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAV 321 (546)
T ss_pred HHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHH
Confidence 0
Q ss_pred HHH------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccc
Q 048729 136 RAR------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 185 (330)
Q Consensus 136 ~~~------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy 185 (330)
... ...+.|.|++|. +++++|++++.+++.+ +.|||+++|++++.||
T Consensus 322 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY 398 (546)
T PRK08314 322 AERLKELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGV-DARVIDPETLEELPPG--EVGEIVVHGPQVFKGY 398 (546)
T ss_pred HHHHHHHcCCcEEecccccccccceecCCCcCCCCCccCcccCCe-EEEEEeCCCCcCCCCC--CceEEEEECCchhccc
Confidence 000 012345666675 7788887688888888 7899999999999999
Q ss_pred cCCchhhhcccc---CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCC
Q 048729 186 FKDKEATRRCIS---DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWG 262 (330)
Q Consensus 186 ~~~~~~~~~~~~---~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 262 (330)
+++++.+.+.|. .++||+|||+|+++++|.+++.||.||++|++|.+|+|.+||+.+.++|+|.+++|++.++...+
T Consensus 399 ~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~ 478 (546)
T PRK08314 399 WNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDPRRG 478 (546)
T ss_pred cCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCcccC
Confidence 999988877763 23599999999999999999999999999999999999999999999999999999999988778
Q ss_pred ceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 263 EIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 263 ~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+.++++++..++.... .+.+++.+.++++|+++++|..++++++||+|++||++|++|++..+.
T Consensus 479 ~~~~a~v~~~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 479 ETVKAVVVLRPEARGK--TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKA 542 (546)
T ss_pred ceeEEEEEECCCCCCC--CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhh
Confidence 8999999887764311 456899999999999999999999999999999999999999987654
No 21
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.1e-46 Score=351.47 Aligned_cols=299 Identities=26% Similarity=0.371 Sum_probs=260.2
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
+.++.++|.+.++.+||++|+++.++++||.||.+.++++|++|.+.|+++||+|+++++|++++++.++||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH-----------------------------hc-c---Cc------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA-----------------------------LS-L---FP------ 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----------------------------~~-~---~~------ 134 (330)
|+++.++.+++.++++..++++++++......+... .. . ..
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 201 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHAGQRPEPTGRKGRVI 201 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccCcCCCCCCCCCCeEE
Confidence 999999999999999999999999875433221110 00 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 202 l~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~ 281 (537)
T PRK13382 202 LLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDLID 281 (537)
T ss_pred EECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHHHH
Confidence
Q ss_pred -----------------------------------------------------------------------------hHH
Q 048729 135 -----------------------------------------------------------------------------QRA 137 (330)
Q Consensus 135 -----------------------------------------------------------------------------~~~ 137 (330)
...
T Consensus 282 ~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~ 361 (537)
T PRK13382 282 RHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLR 361 (537)
T ss_pred HhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhc
Confidence 000
Q ss_pred HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEE
Q 048729 138 RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVE 217 (330)
Q Consensus 138 ~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~ 217 (330)
....++|.|+.|. +++++|+ ++++++.+ +.|||+++|++++.||+ ++.+. .+. +|||+|||++++|++|+++
T Consensus 362 ~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~gY~--~~~~~-~~~-~g~~~TGDl~~~~~~g~l~ 433 (537)
T PRK13382 362 AAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFDGYT--SGSTK-DFH-DGFMASGDVGYLDENGRLF 433 (537)
T ss_pred cCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcccCcc--ccchh-hcc-CCCEeeCceEEEeCCCcEE
Confidence 1123466677775 7888888 78888888 88999999999999998 44443 344 7999999999999999999
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRY 297 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 297 (330)
+.||.||+||.+|++|++.+||+.|.++|+|.+++|++.+++..++.+.+++++.++.. ...+++++.++++|+.+
T Consensus 434 ~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~----~~~~~l~~~l~~~l~~~ 509 (537)
T PRK13382 434 VVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGAS----ATPETLKQHVRDNLANY 509 (537)
T ss_pred EeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCC----CCHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999998877889999998876654 66789999999999999
Q ss_pred CCCceEEEccCCCCCCCCcccHHHHHH
Q 048729 298 MVPRKVVFSEELPKTSTGKIQKYLLRE 324 (330)
Q Consensus 298 ~~p~~~~~v~~lP~t~~GKv~r~~l~~ 324 (330)
.+|..+++++++|+|++||++|++|++
T Consensus 510 ~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 510 KVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred CCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 999999999999999999999999874
No 22
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-45 Score=357.47 Aligned_cols=306 Identities=25% Similarity=0.366 Sum_probs=259.2
Q ss_pred HHHHHHHHHhcCCCcEEEeCC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 18 LGFLERAAAAYTDCPSLVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 18 ~~~l~~~~~~~p~~~a~~~~~------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
.+.|.+.++.+|+++|+++.+ +++||+||.+.+.++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 456777888899999999643 47999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------HHHH-----------------------------------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHT---------YLLL----------------------------------- 127 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~----------------------------------- 127 (330)
++|+++.++++++.++++..+++++++++... ..+.
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHEL 229 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHH
Confidence 99999999999999999999999999865321 0000
Q ss_pred -HHh-cc-----Cc------------------------------------------------------------------
Q 048729 128 -EAL-SL-----FP------------------------------------------------------------------ 134 (330)
Q Consensus 128 -~~~-~~-----~~------------------------------------------------------------------ 134 (330)
... .. ..
T Consensus 230 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 309 (637)
T PRK00174 230 VAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGP 309 (637)
T ss_pred HhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHH
Confidence 000 00 00
Q ss_pred ---------------------------------------------------------------------------h--HH
Q 048729 135 ---------------------------------------------------------------------------Q--RA 137 (330)
Q Consensus 135 ---------------------------------------------------------------------------~--~~ 137 (330)
. ..
T Consensus 310 l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~ 389 (637)
T PRK00174 310 LANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYK 389 (637)
T ss_pred HHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHH
Confidence 0 00
Q ss_pred H-------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEec--Cccccc
Q 048729 138 R-------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRG--GCVTVG 184 (330)
Q Consensus 138 ~-------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~--~~~~~g 184 (330)
. ...++|.|++|+ +++|+|+ +|++++.+ +.|||+++| ++++.|
T Consensus 390 ~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~~p~~~~g 465 (637)
T PRK00174 390 VVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGI-QPAVVDE-EGNPLEGG--EGGNLVIKDPWPGMMRT 465 (637)
T ss_pred HhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCc-eEEEECC-CCCCCCCC--CcEEEEEcCCCCccccc
Confidence 0 012467777885 8889997 88999887 889999999 689999
Q ss_pred ccCCchhhhccc--cCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCC
Q 048729 185 YFKDKEATRRCI--SDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWG 262 (330)
Q Consensus 185 y~~~~~~~~~~~--~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 262 (330)
||++++.+.+.+ ..+|||+|||++++|++|+++++||.||+||++|++|+|.+||++|.++|+|.+++|++.+++..+
T Consensus 466 y~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g 545 (637)
T PRK00174 466 IYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKG 545 (637)
T ss_pred ccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCC
Confidence 999998776655 237899999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 263 EIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 263 ~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+.+++++++.++.... ....+++.+.++++|+.++.|..++++++||+|++||++|+.|++.+.+
T Consensus 546 ~~~~a~vv~~~~~~~~-~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~ 610 (637)
T PRK00174 546 QGIYAFVTLKGGEEPS-DELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEG 610 (637)
T ss_pred eEEEEEEEECCCCCCC-HHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 9999999988765310 0125789999999999999999999999999999999999999998643
No 23
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-45 Score=347.07 Aligned_cols=310 Identities=35% Similarity=0.551 Sum_probs=274.8
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 11 NSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
.....++.++|.+.++.+|+++|+++.++.+||.||.+.+.++|+.|.+.|+++||+|+++++|+.++++.++||+++|+
T Consensus 7 ~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 7 RARRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cccCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc---------------------------------c---C-
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS---------------------------------L---F- 133 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~---------------------------------~---~- 133 (330)
+++|+++.++.+.+.++++..++++++++......+..... . .
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSVAEPDV 166 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCCccCcc
Confidence 99999999999999999999999999988765443321100 0 0
Q ss_pred c-------------------------------------------------------------------------------
Q 048729 134 P------------------------------------------------------------------------------- 134 (330)
Q Consensus 134 ~------------------------------------------------------------------------------- 134 (330)
.
T Consensus 167 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~ 246 (523)
T PRK08316 167 ELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDA 246 (523)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecC
Confidence 0
Q ss_pred ----------------------------------------------------------h-HH------------------
Q 048729 135 ----------------------------------------------------------Q-RA------------------ 137 (330)
Q Consensus 135 ----------------------------------------------------------~-~~------------------ 137 (330)
. ..
T Consensus 247 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 326 (523)
T PRK08316 247 PDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAP 326 (523)
T ss_pred CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCc
Confidence 0 00
Q ss_pred -----------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCc
Q 048729 138 -----------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGD 206 (330)
Q Consensus 138 -----------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 206 (330)
....+.|.+++|. +++|+|+ +|++++.+ +.|||+++|+.++.||+++++.+.+.|. +|||+|||
T Consensus 327 ~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~~~y~~~~~~~~~~~~-~~~~~TGD 401 (523)
T PRK08316 327 LATVLGPEEHLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLMLGYWDDPEKTAEAFR-GGWFHSGD 401 (523)
T ss_pred cccccCccccccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchhhhhcCCHHHHHHHhh-CCCeeccc
Confidence 1123456777775 7888887 78888888 8899999999999999999998888886 89999999
Q ss_pred eEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHH
Q 048729 207 IGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEI 286 (330)
Q Consensus 207 ~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 286 (330)
+|+++++|.+++.||.||++|++|++|+|.+||+.+.++++|.++++++..++..++.++++++..++.. ...+++
T Consensus 402 l~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l 477 (523)
T PRK08316 402 LGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGAT----VTEDEL 477 (523)
T ss_pred eEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCC----CCHHHH
Confidence 9999999999999999999999999999999999999999999999999998888889999999887654 567899
Q ss_pred HHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 287 IEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 287 ~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+.++++++++++|..+++++++|+|++||++|++|+++|++.
T Consensus 478 ~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 478 IAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGA 520 (523)
T ss_pred HHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999865
No 24
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-45 Score=347.39 Aligned_cols=311 Identities=28% Similarity=0.496 Sum_probs=270.5
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
....++|+.++|.+.+..+|+++|+++.++++||+||.+.+.++|+.|.+.|+++||+|++++++++++++.++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 35568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh------------------------------c-----cCc
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL------------------------------S-----LFP 134 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------------------------------~-----~~~ 134 (330)
++++++++.++.+.+.++++..+++.+++++.....+.... . ...
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGARVANAAVD 161 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCCCCCcccCC
Confidence 99999999999999999999999999998765322111000 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~ 241 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERF 241 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCc
Confidence
Q ss_pred ------------------------------------------------------hHHH----------------------
Q 048729 135 ------------------------------------------------------QRAR---------------------- 138 (330)
Q Consensus 135 ------------------------------------------------------~~~~---------------------- 138 (330)
....
T Consensus 242 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~ 321 (528)
T PRK07470 242 DPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNI 321 (528)
T ss_pred CHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCce
Confidence 0000
Q ss_pred ----------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeE
Q 048729 139 ----------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWF 202 (330)
Q Consensus 139 ----------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~ 202 (330)
...++|.++.|. +++++|+ +|++++.+ +.|||+++|+.++.||+++++.+...|. +|||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gy~~~~~~~~~~~~-~~~~ 396 (528)
T PRK07470 322 TVLPPALHDAEDGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVIGPAVFAGYYNNPEANAKAFR-DGWF 396 (528)
T ss_pred eecchhhccccccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEeCCccchhhcCCHHHHHhhhc-CCcE
Confidence 012345556664 6777887 78888888 8899999999999999999998888876 8999
Q ss_pred EeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCC
Q 048729 203 YTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPT 282 (330)
Q Consensus 203 ~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 282 (330)
+|||+++++++|++++.||.||++|++|++|+|.+||+.+.++|+|.+++|++.+++..++.+.++++..++.. .+
T Consensus 397 ~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~ 472 (528)
T PRK07470 397 RTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAP----VD 472 (528)
T ss_pred ecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCC----CC
Confidence 99999999999999999999999999999999999999999999999999999988877777888888776644 56
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 283 EKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 283 ~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+++.++++++|+++.+|..++++++||+|++||++|+.|++++.+.
T Consensus 473 ~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 473 EAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred HHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999988653
No 25
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.9e-45 Score=347.75 Aligned_cols=318 Identities=36% Similarity=0.566 Sum_probs=275.9
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEe--CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 5 LLPNSANSTPLTTLGFLERAAAAYTDCPSLVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~--~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
..+...+....++.++|.+.++.+|+++|+++ .++++||+||.+++.++|++|.+.|+++||+|+++++|++++++.+
T Consensus 6 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 85 (559)
T PRK08315 6 RGPTDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQ 85 (559)
T ss_pred cCCCcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 45666777788999999999999999999998 5678999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH--------------------------------------
Q 048729 83 FGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY-------------------------------------- 124 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-------------------------------------- 124 (330)
|||+++|++++|+++.++.+.+..+++..++++++++.....
T Consensus 86 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (559)
T PRK08315 86 FATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD 165 (559)
T ss_pred HHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc
Confidence 999999999999999999999999999999999988653210
Q ss_pred ----------HHHHH------------hccCc------------------------------------------------
Q 048729 125 ----------LLLEA------------LSLFP------------------------------------------------ 134 (330)
Q Consensus 125 ----------~~~~~------------~~~~~------------------------------------------------ 134 (330)
.+... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 245 (559)
T PRK08315 166 EKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCI 245 (559)
T ss_pred cCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 00000 00000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 246 ~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~ 325 (559)
T PRK08315 246 PVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGS 325 (559)
T ss_pred ecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCC
Confidence
Q ss_pred -----h----H------------------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEE
Q 048729 135 -----Q----R------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVV 175 (330)
Q Consensus 135 -----~----~------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~ 175 (330)
. . .....++|.|++|. +++++|++++++++.+ +.|||+
T Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~GEl~ 402 (559)
T PRK08315 326 PCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHL-EVKIVDPETGETVPRG--EQGELC 402 (559)
T ss_pred CCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCc-EEEEEcCccCCcCCCC--CceEEE
Confidence 0 0 00123556777785 8888998569999888 889999
Q ss_pred EecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEe
Q 048729 176 LRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVA 255 (330)
Q Consensus 176 v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 255 (330)
++|++++.||+++++.+...+..++||+|||++++|++|.++++||.||++|++|++|++.+||+.+.++|+|.+++|++
T Consensus 403 v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 482 (559)
T PRK08315 403 TRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVG 482 (559)
T ss_pred EECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEe
Confidence 99999999999999988888866899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 256 RPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 256 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
..++..++.++++|+...+.. ...+++.+.++++++.|++|..+++++++|+|++||++|.+|++++.++
T Consensus 483 ~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~ 552 (559)
T PRK08315 483 VPDEKYGEEVCAWIILRPGAT----LTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEE 552 (559)
T ss_pred cCCCCCCeEEEEEEEeCCCCC----CCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhh
Confidence 988877788888888776544 5678999999999999999999999999999999999999999988654
No 26
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-45 Score=350.53 Aligned_cols=314 Identities=31% Similarity=0.454 Sum_probs=271.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhh
Q 048729 7 PNSANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVP 86 (330)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~ 86 (330)
+.+.+....++.++|.+.++++|+++|+++.++.+||.||.+.++++|++|.+.|+++||+|+++++|++++++.++||+
T Consensus 24 ~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~ 103 (573)
T PRK05605 24 PHDLDYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVL 103 (573)
T ss_pred CcccCCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 33445556799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH---------------------------------------
Q 048729 87 MSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL--------------------------------------- 127 (330)
Q Consensus 87 ~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~--------------------------------------- 127 (330)
++|++++|+++.++.+.+.+++...+++++++.+.....+.
T Consensus 104 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (573)
T PRK05605 104 RLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKAR 183 (573)
T ss_pred hcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccccccccccccccccc
Confidence 99999999999999999999999999999987443211100
Q ss_pred --------------H---H---h----cc---Cc----------------------------------------------
Q 048729 128 --------------E---A---L----SL---FP---------------------------------------------- 134 (330)
Q Consensus 128 --------------~---~---~----~~---~~---------------------------------------------- 134 (330)
. . . .. ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 263 (573)
T PRK05605 184 AALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPE 263 (573)
T ss_pred cccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCc
Confidence 0 0 0 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 264 ~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 343 (573)
T PRK05605 264 RVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFS 343 (573)
T ss_pred EEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEE
Confidence
Q ss_pred -----------hHH----------------------------HHhhccCCcccCceeEEEeCCCC-CcccCCCCceecEE
Q 048729 135 -----------QRA----------------------------RLKARQGVKTVGLAEVDVVNPET-GESVKRDGVSLGEV 174 (330)
Q Consensus 135 -----------~~~----------------------------~~~~~~G~~~~g~te~~i~d~~~-g~~~~~~~~~~Gel 174 (330)
... ....++|.+++|. +++|+|+++ +.+++.+ +.|||
T Consensus 344 gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~~g--~~Gel 420 (573)
T PRK05605 344 GAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDT-EVRIVDPEDPDETMPDG--EEGEL 420 (573)
T ss_pred CCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCCCC-EEEEEcCCCCCccCCCC--CeeEE
Confidence 000 0012456677774 788888744 5788877 88999
Q ss_pred EEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEE
Q 048729 175 VLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVV 254 (330)
Q Consensus 175 ~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~ 254 (330)
+++|+.++.||+++++.+...|. +|||+|||++++|++|.+++.||.||++|++|++|+|.+||+.+..++.|.+++++
T Consensus 421 ~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~ 499 (573)
T PRK05605 421 LVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVV 499 (573)
T ss_pred EEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEE
Confidence 99999999999999999988887 78999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 255 ARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+..+...++.+++++++..+.. .+.+++.+.++++|+.+++|..+++++++|+|++||++|++|++++.+
T Consensus 500 ~~~~~~~~~~~~~~vv~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 500 GLPREDGSEEVVAAVVLEPGAA----LDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred eeecccCCeEEEEEEEECCCCC----CCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 9988877788999998877644 677999999999999999999999999999999999999999998854
No 27
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4.2e-45 Score=344.58 Aligned_cols=308 Identities=30% Similarity=0.458 Sum_probs=269.8
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEe-CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~-~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
..++.+++...+ .+|+++|+.+ .++.+||.||.+.+.++|++|.+.|+++||+|++++++++++++.++|++++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 468999999999 9999999998 56789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh-----------------------ccC-------c--------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL-----------------------SLF-------P-------- 134 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~-------~-------- 134 (330)
+|+++.++.+++..+++..+++++++++.....+.... ... .
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 160 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAPDDFETVPRGADDLAA 160 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcCcccCcccCCCCCeEE
Confidence 99999999999999999999999998765432211100 000 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 161 i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 240 (504)
T PRK07514 161 ILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLAL 240 (504)
T ss_pred EEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHH
Confidence
Q ss_pred --------------------------------------------hHH------------------------------HHh
Q 048729 135 --------------------------------------------QRA------------------------------RLK 140 (330)
Q Consensus 135 --------------------------------------------~~~------------------------------~~~ 140 (330)
... ...
T Consensus 241 i~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~ 320 (504)
T PRK07514 241 MPRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYDGERRA 320 (504)
T ss_pred HHhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCccccccC
Confidence 000 002
Q ss_pred hccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEe
Q 048729 141 ARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKD 220 (330)
Q Consensus 141 ~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~G 220 (330)
.+.|.|++|. +++++|++++++++.+ +.|||+++|++++.||+++++.+.+.|..+|||+|||+++++++|.+++.|
T Consensus 321 ~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~G 397 (504)
T PRK07514 321 GTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVG 397 (504)
T ss_pred cccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEec
Confidence 2455666775 7888886689999888 889999999999999999999998888878999999999999999999999
Q ss_pred cCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCC
Q 048729 221 RSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVP 300 (330)
Q Consensus 221 R~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p 300 (330)
|.||++|++|.+|++.+||+.+.++++|.++++++.++...++.++++++...+.. .+.+++.+.++++++++++|
T Consensus 398 R~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~l~~~~~p 473 (504)
T PRK07514 398 RGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAA----LDEAAILAALKGRLARFKQP 473 (504)
T ss_pred cccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCC----CCHHHHHHHHHhhcccCCCC
Confidence 99999999999999999999999999999999999988777788889888876554 57789999999999999999
Q ss_pred ceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 301 RKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 301 ~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
..+++++++|+|++||++|++|++++.++
T Consensus 474 ~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 474 KRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred cEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 28
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.9e-45 Score=346.32 Aligned_cols=307 Identities=33% Similarity=0.507 Sum_probs=265.1
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHh
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 85 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~ 85 (330)
+...++.++|.+.++.+|+++|+++.+ +++||+||.+.++++|++|.+.|+++||+|+++++|++++++++||+
T Consensus 21 ~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~ 100 (547)
T PRK13295 21 WHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLAC 100 (547)
T ss_pred CcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 345689999999999999999999865 89999999999999999999999999999999999999999999999
Q ss_pred hhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch-----HHHH------------------------HHh------
Q 048729 86 PMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT-----YLLL------------------------EAL------ 130 (330)
Q Consensus 86 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~------------------------~~~------ 130 (330)
+++|++++|+++.++.+.+.++++..++++++++..+. ..+. ...
T Consensus 101 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (547)
T PRK13295 101 SRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPAWE 180 (547)
T ss_pred HhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCccc
Confidence 99999999999999999999999999999999865420 0000 000
Q ss_pred --c--------c-Cc-----------------------------------------------------------------
Q 048729 131 --S--------L-FP----------------------------------------------------------------- 134 (330)
Q Consensus 131 --~--------~-~~----------------------------------------------------------------- 134 (330)
. . ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~ 260 (547)
T PRK13295 181 QEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMP 260 (547)
T ss_pred cccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHH
Confidence 0 0 00
Q ss_pred -------------------------------------------------------------------h------------
Q 048729 135 -------------------------------------------------------------------Q------------ 135 (330)
Q Consensus 135 -------------------------------------------------------------------~------------ 135 (330)
.
T Consensus 261 l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~ 340 (547)
T PRK13295 261 VMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAALGAKI 340 (547)
T ss_pred HHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHhCCCe
Confidence 0
Q ss_pred --------------------HHHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcc
Q 048729 136 --------------------RARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRC 195 (330)
Q Consensus 136 --------------------~~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 195 (330)
......+.|.|++|. +++|+|+ ++++++.+ +.|||+++|++++.||+++++.+...
T Consensus 341 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~ 416 (547)
T PRK13295 341 VSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGV-EVRVVDA-DGAPLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD 416 (547)
T ss_pred EEeccCCCCCCeeeccCCCcchhccCccccccCCc-EEEEECC-CCCCCCCC--CCCeEEEEcCcccccccCCccccccC
Confidence 001123456666775 7888887 78888888 88999999999999999999877665
Q ss_pred ccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCc
Q 048729 196 ISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDL 275 (330)
Q Consensus 196 ~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 275 (330)
.+|||+|||+++++++|++++.||.+|++|++|++|+|.+||+.|.++++|.+++|++..++..++++++++++..+.
T Consensus 417 --~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~ 494 (547)
T PRK13295 417 --ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQ 494 (547)
T ss_pred --CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCC
Confidence 378999999999999999999999999999999999999999999999999999999999887788999999887764
Q ss_pred ccCCCCCHHHHHHHHHh-cCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 276 ELTKKPTEKEIIEYCRA-RLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 276 ~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
. ...+++.+.+++ +++++++|..++++++||+|++||++|++|++++.+
T Consensus 495 ~----~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 495 S----LDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred C----CCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhc
Confidence 3 566889999986 799999999999999999999999999999998754
No 29
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.8e-45 Score=343.09 Aligned_cols=303 Identities=32% Similarity=0.536 Sum_probs=260.7
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
+++.++|.+++..+||++|+++.++.+||.||.+++++++++|.+.|+++||+|++++++++++++.++|++++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------hcc----------Cc----------------------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA--------LSL----------FP---------------------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--------~~~----------~~---------------------- 134 (330)
+++.++.+.+..++++.+++.++++.......... ... ..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~ 161 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGISVKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQ 161 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhccccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEE
Confidence 99999999999999999999999875433322110 000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 241 (483)
T PRK03640 162 TYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQ 241 (483)
T ss_pred ecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHH
Confidence
Q ss_pred ----------------------------h-------------------------------HHHHhhccCCcccCceeEEE
Q 048729 135 ----------------------------Q-------------------------------RARLKARQGVKTVGLAEVDV 155 (330)
Q Consensus 135 ----------------------------~-------------------------------~~~~~~~~G~~~~g~te~~i 155 (330)
. ......+.|.|++|. ++++
T Consensus 242 ~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~-~~~i 320 (483)
T PRK03640 242 RLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPC-ELKI 320 (483)
T ss_pred HHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeeccCcccccccccCcccccccCCCcccccCCc-EEEE
Confidence 0 000112344555553 5566
Q ss_pred eCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCH
Q 048729 156 VNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICS 235 (330)
Q Consensus 156 ~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~ 235 (330)
.++ +.+++.+ +.|||+++|++++.||+++++.+.+.|. +|||+|||+++++++|.+++.||+||++|++|.+|++
T Consensus 321 ~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~-~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~ 395 (483)
T PRK03640 321 EKD--GVVVPPF--EEGEIVVKGPNVTKGYLNREDATRETFQ-DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYP 395 (483)
T ss_pred ecC--CCcCCCC--CceEEEEECcchhhhhcCCHHHHHHHHh-cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECH
Confidence 554 3667766 7899999999999999999999888886 8999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCC
Q 048729 236 AEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTG 315 (330)
Q Consensus 236 ~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~G 315 (330)
.+||+.+.++++|.++++++..++..+..++++++.... .+.+++.++++++|+++.+|..|++++++|+|++|
T Consensus 396 ~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~g 469 (483)
T PRK03640 396 AEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGE------VTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASG 469 (483)
T ss_pred HHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCC------CCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCcc
Confidence 999999999999999999999887767777777764433 67789999999999999999999999999999999
Q ss_pred cccHHHHHHHhhhc
Q 048729 316 KIQKYLLREFAKSV 329 (330)
Q Consensus 316 Kv~r~~l~~~~~~~ 329 (330)
|++|++|++++.++
T Consensus 470 K~~r~~l~~~~~~~ 483 (483)
T PRK03640 470 KLLRHELKQLVEEM 483 (483)
T ss_pred ceeHHHHHHHHhhC
Confidence 99999999998763
No 30
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-45 Score=345.08 Aligned_cols=305 Identities=38% Similarity=0.590 Sum_probs=268.2
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
+...++.+.|.+.++.+|+++|+++.++++||.||.+.+.++|+.|.+.|+++||+|+++++|++++++.++||+++|++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH----------------------------------h----cc-
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA----------------------------------L----SL- 132 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----------------------------------~----~~- 132 (330)
++|+++.++.+.+.++++..+++++++++......... . ..
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDPAERAP 161 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCCCCCcC
Confidence 99999999999999999999999999876543221100 0 00
Q ss_pred -Cc-----------------------------------------------------------------------------
Q 048729 133 -FP----------------------------------------------------------------------------- 134 (330)
Q Consensus 133 -~~----------------------------------------------------------------------------- 134 (330)
..
T Consensus 162 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 241 (513)
T PRK07656 162 EVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPV 241 (513)
T ss_pred CCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCc
Confidence 00
Q ss_pred -------------------------------------------------------hH-----------------------
Q 048729 135 -------------------------------------------------------QR----------------------- 136 (330)
Q Consensus 135 -------------------------------------------------------~~----------------------- 136 (330)
..
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 321 (513)
T PRK07656 242 FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASG 321 (513)
T ss_pred CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCC
Confidence 00
Q ss_pred ---------H--HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeC
Q 048729 137 ---------A--RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTG 205 (330)
Q Consensus 137 ---------~--~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TG 205 (330)
. ....++|.+++|. +++++|+ ++++++.+ +.|||+++|+.++.||++++..+...+..+|||+||
T Consensus 322 ~~~~~~~~~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tG 397 (513)
T PRK07656 322 VTTFNRLDDDRKTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTG 397 (513)
T ss_pred ceeecCccccccccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchhhhhhcCCHHHHhhhhccCCceecc
Confidence 0 0023466677775 7888887 78888888 789999999999999999999888888778999999
Q ss_pred ceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHH
Q 048729 206 DIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKE 285 (330)
Q Consensus 206 D~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 285 (330)
|+++++++|.++++||.||++|++|.++++.+||+.+.++++|.+++|++..++..++.+.++++..++.. .+.++
T Consensus 398 Dl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~----~~~~~ 473 (513)
T PRK07656 398 DLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAE----LTEEE 473 (513)
T ss_pred ceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCC----CCHHH
Confidence 99999999999999999999999999999999999999999999999999988877888889988876444 67789
Q ss_pred HHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHH
Q 048729 286 IIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLRE 324 (330)
Q Consensus 286 l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 324 (330)
+.+.++++|+++.+|..+++++++|+|++||++|++|++
T Consensus 474 l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 474 LIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred HHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999999999999999999999999999999999999975
No 31
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-45 Score=360.22 Aligned_cols=303 Identities=23% Similarity=0.343 Sum_probs=255.9
Q ss_pred CCHHHHHHHHHHh--cCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 15 LTTLGFLERAAAA--YTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 15 ~~~~~~l~~~~~~--~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
.|+.++|.+.+.. +||++|+++. +.+||+||.++++++|++|.+.|+++||+|++++++++++++.++||+++|+++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~ 82 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMA 82 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEE
Confidence 3789999998886 7999999874 589999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH------------HHh---c---------cCc--------------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL------------EAL---S---------LFP-------------- 134 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~------------~~~---~---------~~~-------------- 134 (330)
+|+++.++.+++.++++..++++++++......+. ... . ...
T Consensus 83 vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKg 162 (705)
T PRK06060 83 FLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSRVAEAAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKA 162 (705)
T ss_pred EecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccccchhhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcE
Confidence 99999999999999999999999998654322110 000 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 163 V~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 242 (705)
T PRK06060 163 AIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYG 242 (705)
T ss_pred EEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEee
Confidence
Q ss_pred ---------------------------------hH-------------------------------HHHhhccCCcccCc
Q 048729 135 ---------------------------------QR-------------------------------ARLKARQGVKTVGL 150 (330)
Q Consensus 135 ---------------------------------~~-------------------------------~~~~~~~G~~~~g~ 150 (330)
.. .....++|.|++|.
T Consensus 243 ~P~~l~~l~~~~~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~ 322 (705)
T PRK06060 243 VPNFFARVIDSCSPDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPY 322 (705)
T ss_pred HHHHHHHHHHhcccccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCCCc
Confidence 00 00112356666675
Q ss_pred eeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCC
Q 048729 151 AEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGG 230 (330)
Q Consensus 151 te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G 230 (330)
+++++|+ +|++++.+ +.|||+++|++++.||+++++.+. ..+|||+|||+|+++++|+++++||.||+||++|
T Consensus 323 -~v~i~d~-~g~~~~~g--~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G 395 (705)
T PRK06060 323 -EIRVVAP-DGTTAGPG--VEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGG 395 (705)
T ss_pred -EEEEECC-CCCCCCCC--CceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECC
Confidence 7788887 78888888 889999999999999999987643 2479999999999999999999999999999999
Q ss_pred eecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCC
Q 048729 231 ENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELP 310 (330)
Q Consensus 231 ~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP 310 (330)
++|++.+||+.+.++|+|.+++|++..++..++.+.++++...+...+ ....+++.+.++++|+.|++|..|+++++||
T Consensus 396 ~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~-~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP 474 (705)
T PRK06060 396 VNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATID-GSVMRDLHRGLLNRLSAFKVPHRFAVVDRLP 474 (705)
T ss_pred EEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcC-hHHHHHHHHHHHHhCCCCcCCcEEEEeecCC
Confidence 999999999999999999999999999887778899998876553311 0123578899999999999999999999999
Q ss_pred CCCCCcccHHHHHHHh
Q 048729 311 KTSTGKIQKYLLREFA 326 (330)
Q Consensus 311 ~t~~GKv~r~~l~~~~ 326 (330)
+|++||++|++|++.+
T Consensus 475 ~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 475 RTPNGKLVRGALRKQS 490 (705)
T ss_pred CCcchhhHHHHHHhhc
Confidence 9999999999999865
No 32
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5.5e-45 Score=344.81 Aligned_cols=302 Identities=24% Similarity=0.417 Sum_probs=263.3
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCC-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~-----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
..++.++|.+.++++|+++|+++.+ +.+||.||.+.++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~ 85 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKI 85 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 4689999999999999999999753 78999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-------------------------------------
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS------------------------------------- 131 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~------------------------------------- 131 (330)
|++++++++.++.+.+.++++..+++.+++.+.....+.+...
T Consensus 86 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (517)
T PRK08008 86 GAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATLC 165 (517)
T ss_pred CeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCcccc
Confidence 9999999999999999999999999999887654322211000
Q ss_pred ---cCc--------------------------------------------------------------------------
Q 048729 132 ---LFP-------------------------------------------------------------------------- 134 (330)
Q Consensus 132 ---~~~-------------------------------------------------------------------------- 134 (330)
...
T Consensus 166 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 245 (517)
T PRK08008 166 YAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVL 245 (517)
T ss_pred ccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEE
Confidence 000
Q ss_pred -----------------------------h----------------------------HHH-------------------
Q 048729 135 -----------------------------Q----------------------------RAR------------------- 138 (330)
Q Consensus 135 -----------------------------~----------------------------~~~------------------- 138 (330)
. ...
T Consensus 246 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 325 (517)
T PRK08008 246 LEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYLNLSDQEKDAFEERFGVRLLTSYGMTETI 325 (517)
T ss_pred ccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEecCCCHHHHHHHHHHhCCeEEeeccccccc
Confidence 0 000
Q ss_pred ------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEec---CcccccccCCchhhhccccCCCeEE
Q 048729 139 ------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRG---GCVTVGYFKDKEATRRCISDNGWFY 203 (330)
Q Consensus 139 ------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~---~~~~~gy~~~~~~~~~~~~~~g~~~ 203 (330)
...++|.|+.|. +++++|+ +|.+++.+ +.|||+++| ++++.||+++++.+.+.+..+|||+
T Consensus 326 ~~~~~~~~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~ 401 (517)
T PRK08008 326 VGIIGDRPGDKRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLH 401 (517)
T ss_pred cccccCCccccccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCee
Confidence 001345555664 7778887 78888888 889999997 5899999999999998888799999
Q ss_pred eCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCH
Q 048729 204 TGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTE 283 (330)
Q Consensus 204 TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 283 (330)
|||++++|++|.+++.||.||++|++|++|+|.+||+++.+++.|.+++|++..++..++++.+++++..+.. .+.
T Consensus 402 TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~----~~~ 477 (517)
T PRK08008 402 TGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGET----LSE 477 (517)
T ss_pred ccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCC----CCH
Confidence 9999999999999999999999999999999999999999999999999999998877888999999887654 567
Q ss_pred HHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHH
Q 048729 284 KEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLR 323 (330)
Q Consensus 284 ~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 323 (330)
+++.++++++++++.+|..+++++++|+|++||++|+.|+
T Consensus 478 ~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 478 EEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred HHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 8999999999999999999999999999999999999874
No 33
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.8e-45 Score=347.95 Aligned_cols=302 Identities=19% Similarity=0.232 Sum_probs=248.1
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCC-eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~-~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
....++.+.|.+.++++|+++|+.+.. +++||+||.+.++++|++|.+ .+||+|+++++|++++++++|||+++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~ 92 (539)
T PRK06334 16 RSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGK 92 (539)
T ss_pred CcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCC
Confidence 345789999999999999999998865 799999999999999999986 3899999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH-----------------------------------h-----
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA-----------------------------------L----- 130 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----------------------------------~----- 130 (330)
+++|+++.++.+++.++++..++++++++......+... .
T Consensus 93 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (539)
T PRK06334 93 IPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFEWLM 172 (539)
T ss_pred eeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCchhhh
Confidence 999999999999999999999999999875433211100 0
Q ss_pred -----ccCc-----------------------------------------------------------------------
Q 048729 131 -----SLFP----------------------------------------------------------------------- 134 (330)
Q Consensus 131 -----~~~~----------------------------------------------------------------------- 134 (330)
....
T Consensus 173 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~ 252 (539)
T PRK06334 173 RWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVP 252 (539)
T ss_pred hcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCe
Confidence 0000
Q ss_pred --------------------------------------------------------------h----H------------
Q 048729 135 --------------------------------------------------------------Q----R------------ 136 (330)
Q Consensus 135 --------------------------------------------------------------~----~------------ 136 (330)
. .
T Consensus 253 vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~Y 332 (539)
T PRK06334 253 VVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGY 332 (539)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecc
Confidence 0 0
Q ss_pred ----------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcc-ccCC
Q 048729 137 ----------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRC-ISDN 199 (330)
Q Consensus 137 ----------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~-~~~~ 199 (330)
.....++|.|++|. +++|+|++++.+++.+ +.|||+++|++++.||+++++.+... ...+
T Consensus 333 G~TE~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~ 409 (539)
T PRK06334 333 GTTECSPVITINTVNSPKHESCVGMPIRGM-DVLIVSEETKVPVSSG--ETGLVLTRGTSLFSGYLGEDFGQGFVELGGE 409 (539)
T ss_pred cccccCceEEeccCCCCCCCCcCceecCCC-EEEEEcCCCCccCCCC--ceEEEEEecCcccccccCCcccccceeeCCc
Confidence 00112456777775 7888887678889888 88999999999999999998754322 1236
Q ss_pred CeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcce------EEEEeecCCCCCceeEEEEEecC
Q 048729 200 GWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNE------AAVVARPDMFWGEIPCAFVSLKR 273 (330)
Q Consensus 200 g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~------~~v~~~~~~~~~~~~~~~v~~~~ 273 (330)
|||+|||+|++|++|++++.||.+|+||++|++|+|.+||+.|.+||+|.+ ++|++.+++ ...++++++ .
T Consensus 410 ~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~~~--~ 485 (539)
T PRK06334 410 TWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGE--KVRLCLFTT--F 485 (539)
T ss_pred eeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCC--ceEEEEEEe--c
Confidence 899999999999999999999999999999999999999999999999998 677776643 223444443 2
Q ss_pred CcccCCCCCHHHHHHHHHhc-CCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 274 DLELTKKPTEKEIIEYCRAR-LPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 274 ~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
. .+.+++.++++++ ++.|++|+.+.++++||+|++||++|++|++++.++
T Consensus 486 ~------~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 486 P------TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSL 536 (539)
T ss_pred c------CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHh
Confidence 2 3457889999886 789999999999999999999999999999987653
No 34
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-44 Score=344.36 Aligned_cols=314 Identities=28% Similarity=0.408 Sum_probs=264.9
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 9 SANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
.+.....++.++|.+.++.+|+++|+++.++++||.||.+.+.++|++|.+.|+++||+|+++++|++++++.++||+++
T Consensus 4 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 4 DAAPRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred ccccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 34455668999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch-----HHHHHH-------------h--------------------
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT-----YLLLEA-------------L-------------------- 130 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~-------------~-------------------- 130 (330)
|++++|+++..+.+++.++++..+++++++++.+. ..+... .
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFA 163 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccccc
Confidence 99999999999999999999999999999865421 000000 0
Q ss_pred ------------ccC-c---------------------------------------------------------------
Q 048729 131 ------------SLF-P--------------------------------------------------------------- 134 (330)
Q Consensus 131 ------------~~~-~--------------------------------------------------------------- 134 (330)
... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 243 (540)
T PRK06164 164 LPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGA 243 (540)
T ss_pred ccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHH
Confidence 000 0
Q ss_pred -----------------------------------------h-------------------------HHHHhhccCC---
Q 048729 135 -----------------------------------------Q-------------------------RARLKARQGV--- 145 (330)
Q Consensus 135 -----------------------------------------~-------------------------~~~~~~~~G~--- 145 (330)
. ........|.
T Consensus 244 l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (540)
T PRK06164 244 LAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFASFAPALGELAALARARGVPLT 323 (540)
T ss_pred HhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeeccCCcchHHHHHHHhhcCCcee
Confidence 0 0000000011
Q ss_pred cccCce------------------------------eEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcc
Q 048729 146 KTVGLA------------------------------EVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRC 195 (330)
Q Consensus 146 ~~~g~t------------------------------e~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 195 (330)
..||.| +++++|++++.+++.+ +.|||+++|++++.||+++++.+...
T Consensus 324 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~ 401 (540)
T PRK06164 324 GLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDG--ESGEIEIRAPSLMRGYLDNPDATARA 401 (540)
T ss_pred cceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCC--CeeEEEEecccccccccCCchhhhhc
Confidence 113333 5566676678888877 88999999999999999999999998
Q ss_pred ccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCc
Q 048729 196 ISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDL 275 (330)
Q Consensus 196 ~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 275 (330)
|..+|||+|||+|++|++|.+++.||.+|++|++|++|+|.+||+.+.++|+|.+++|++.... .+..++++++..++.
T Consensus 402 ~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~-~~~~~~~~vv~~~~~ 480 (540)
T PRK06164 402 LTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATRD-GKTVPVAFVIPTDGA 480 (540)
T ss_pred ccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCCC-CceeEEEEEEeCCCC
Confidence 8878999999999999999999999999999999999999999999999999999999998743 456788888887665
Q ss_pred ccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCC---cccHHHHHHHhhhc
Q 048729 276 ELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTG---KIQKYLLREFAKSV 329 (330)
Q Consensus 276 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~G---Kv~r~~l~~~~~~~ 329 (330)
. ...+++.+.++++++++.+|..+++++++|+|++| |++|+.|+++++++
T Consensus 481 ~----~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~ 533 (540)
T PRK06164 481 S----PDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQAR 533 (540)
T ss_pred C----CCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHh
Confidence 4 67899999999999999999999999999999999 99999999998765
No 35
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-45 Score=342.84 Aligned_cols=301 Identities=30% Similarity=0.448 Sum_probs=258.1
Q ss_pred HHHHHhcCCCcEEEe--CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC
Q 048729 22 ERAAAAYTDCPSLVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 99 (330)
Q Consensus 22 ~~~~~~~p~~~a~~~--~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~ 99 (330)
..++..+||++|+.+ .++++||+||.+.+.++|++|.+.|+++||+|+++++|++++++.+|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 356788999999987 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcccchHH---------HHHHhcc--------Cc----------------------------
Q 048729 100 DAHTLSVLLQHSESKLVFVDHLHTYL---------LLEALSL--------FP---------------------------- 134 (330)
Q Consensus 100 ~~~~l~~~l~~~~~~~i~~~~~~~~~---------~~~~~~~--------~~---------------------------- 134 (330)
+++.+.++++..++++++++...... +...... ..
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~ 161 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGRTDVEDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQ 161 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcccccccchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHH
Confidence 99999999999999999986532210 0000000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 ~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~ 241 (488)
T PRK09088 162 QTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFR 241 (488)
T ss_pred HHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHH
Confidence
Q ss_pred --------------------------hH---H-----------------------------HHhhccCCcccCceeEEEe
Q 048729 135 --------------------------QR---A-----------------------------RLKARQGVKTVGLAEVDVV 156 (330)
Q Consensus 135 --------------------------~~---~-----------------------------~~~~~~G~~~~g~te~~i~ 156 (330)
.. . ....++|.+++|. +++|+
T Consensus 242 ~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~i~ 320 (488)
T PRK09088 242 AQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTV-QTRVV 320 (488)
T ss_pred hCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeecccccccccccCCCcccccccCCccccCCCCc-EEEEE
Confidence 00 0 0112345555664 66777
Q ss_pred CCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHH
Q 048729 157 NPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSA 236 (330)
Q Consensus 157 d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~ 236 (330)
|+ ++.+++.+ +.|||+++|++++.||+++++.+.+.+..+|||+|||+|++|++|.+++.||.+|+||++|.+++|.
T Consensus 321 d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ 397 (488)
T PRK09088 321 DD-QGNDCPAG--VPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPA 397 (488)
T ss_pred CC-CCCCCcCC--CceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHH
Confidence 76 78888777 7899999999999999999998888887789999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCc
Q 048729 237 EVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGK 316 (330)
Q Consensus 237 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GK 316 (330)
+||+.|..+|+|.++++++..++..++..++++++.++.. .+.+++.+.++++++++++|..+.++++||+|++||
T Consensus 398 ~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK 473 (488)
T PRK09088 398 EIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAP----LDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGK 473 (488)
T ss_pred HHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCC----CCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCc
Confidence 9999999999999999999988776778888888876544 567899999999999999999999999999999999
Q ss_pred ccHHHHHHHhhhcC
Q 048729 317 IQKYLLREFAKSVS 330 (330)
Q Consensus 317 v~r~~l~~~~~~~~ 330 (330)
++|++|++++.+.+
T Consensus 474 i~r~~l~~~~~~~~ 487 (488)
T PRK09088 474 LQKARLRDALAAGR 487 (488)
T ss_pred eeHHHHHHHHHhcC
Confidence 99999999987653
No 36
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-45 Score=345.37 Aligned_cols=307 Identities=25% Similarity=0.394 Sum_probs=262.0
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCC--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~--~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
...++.+.|.+.++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++.++||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (534)
T PRK05852 14 FGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADL 93 (534)
T ss_pred hcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCc
Confidence 45689999999999999999998754 5799999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH-----------------------------H---------Hhcc
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL-----------------------------E---------ALSL 132 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-----------------------------~---------~~~~ 132 (330)
+++++++.++.+.+.++++..++++++++........ . ....
T Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (534)
T PRK05852 94 VVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATSTPEG 173 (534)
T ss_pred EEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccccCC
Confidence 9999999999999999999999999996542110000 0 0000
Q ss_pred ----Cc--------------------------------------------------------------------------
Q 048729 133 ----FP-------------------------------------------------------------------------- 134 (330)
Q Consensus 133 ----~~-------------------------------------------------------------------------- 134 (330)
..
T Consensus 174 ~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 253 (534)
T PRK05852 174 LRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR 253 (534)
T ss_pred CCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC
Confidence 00
Q ss_pred ---------------------------------------------------------hHHHH------------------
Q 048729 135 ---------------------------------------------------------QRARL------------------ 139 (330)
Q Consensus 135 ---------------------------------------------------------~~~~~------------------ 139 (330)
....+
T Consensus 254 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~ 333 (534)
T PRK05852 254 FSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEAT 333 (534)
T ss_pred cCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccc
Confidence 00000
Q ss_pred -----------------hhccCCc--ccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCC
Q 048729 140 -----------------KARQGVK--TVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNG 200 (330)
Q Consensus 140 -----------------~~~~G~~--~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g 200 (330)
..+.|.+ ..|. +++++|+ +|++++.+ +.|||+++|+.++.||+++++.+.+.|. +|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~~v~~gY~~~~~~t~~~~~-~g 408 (534)
T PRK05852 334 HQVTTTQIEGIGQTENPVVSTGLVGRSTGA-QIRIVGS-DGLPLPAG--AVGEVWLRGTTVVRGYLGDPTITAANFT-DG 408 (534)
T ss_pred hhhhcCCccccccccCcccccccCCCCCCC-eEEEECC-CCCCCCCC--CceEEEEecCcccchhcCCcccchhhhc-CC
Confidence 0011222 3554 6777777 78888887 8899999999999999999999888886 89
Q ss_pred eEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCC
Q 048729 201 WFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKK 280 (330)
Q Consensus 201 ~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 280 (330)
||+|||++++|+||++++.||.+|++|++|.+|+|.+||+++.++|+|.+++|++..++..++.++++++..+...
T Consensus 409 ~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~---- 484 (534)
T PRK05852 409 WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAP---- 484 (534)
T ss_pred CcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCC----
Confidence 9999999999999999999999999999999999999999999999999999999998877888999988766543
Q ss_pred CCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 281 PTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 281 ~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+.+++.+.++++|+.+.+|..+++++++|+|++||++|++|++++..
T Consensus 485 ~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 485 PTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred CCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 577899999999999999999999999999999999999999998853
No 37
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-45 Score=352.95 Aligned_cols=307 Identities=20% Similarity=0.305 Sum_probs=252.7
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCC-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~-----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
..|+.+.+.++ .+|+++|+++.+ +++||+||.+.+.++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 85 ~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~ 162 (655)
T PRK03584 85 RLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASL 162 (655)
T ss_pred EeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 34666666543 589999999753 68999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------HHH---------------------------------
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT---------YLL--------------------------------- 126 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~--------------------------------- 126 (330)
|++++|+++.++++.+.++++..+++++++.+... ..+
T Consensus 163 Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 242 (655)
T PRK03584 163 GAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALL 242 (655)
T ss_pred CcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCccc
Confidence 99999999999999999999999999999865321 000
Q ss_pred -HHHhc-----cC-----c-------------------------------------------------------------
Q 048729 127 -LEALS-----LF-----P------------------------------------------------------------- 134 (330)
Q Consensus 127 -~~~~~-----~~-----~------------------------------------------------------------- 134 (330)
..... .. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 322 (655)
T PRK03584 243 WEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWNWL 322 (655)
T ss_pred HHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHHHH
Confidence 00000 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 323 ~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~ 402 (655)
T PRK03584 323 VSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDW 402 (655)
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHH
Confidence
Q ss_pred hHHH-----------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC--cccc
Q 048729 135 QRAR-----------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG--CVTV 183 (330)
Q Consensus 135 ~~~~-----------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~--~~~~ 183 (330)
.... ..+++|.|++|+ +++|+|+ +|+++ .+ +.|||+++|+ +++.
T Consensus 403 ~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~-~~~ivd~-~g~~~-~g--~~GeL~v~gp~p~~~~ 477 (655)
T PRK03584 403 VYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGM-AVEAWDE-DGRPV-VG--EVGELVCTKPFPSMPL 477 (655)
T ss_pred HHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCc-eeEEECC-CCCCC-CC--CceEEEEccCCCCCcc
Confidence 0000 012345667775 8899998 78888 55 7899999996 7899
Q ss_pred cccCCchhhh--cc-cc-CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCC
Q 048729 184 GYFKDKEATR--RC-IS-DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDM 259 (330)
Q Consensus 184 gy~~~~~~~~--~~-~~-~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 259 (330)
|||++++.+. .. |. -+|||+|||++++|+||+++++||.||+||++|++|+|.+||++|.+||+|.+++|++.+++
T Consensus 478 gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~ 557 (655)
T PRK03584 478 GFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWP 557 (655)
T ss_pred eeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcC
Confidence 9999887432 11 11 16899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 260 FWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 260 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
..++++.++|++.++.... ....+++.+.++++|+++++|..|+++++||+|++||++|+.|++.+.+
T Consensus 558 ~~g~~~~a~vv~~~~~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~ 625 (655)
T PRK03584 558 DGDVRMPLFVVLAEGVTLD-DALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHG 625 (655)
T ss_pred CCCEEEEEEEEECCCCCCc-HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcC
Confidence 8889999999998764311 0123689999999999999999999999999999999999999998754
No 38
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-45 Score=341.84 Aligned_cols=304 Identities=33% Similarity=0.533 Sum_probs=264.8
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
+++.++|.++++++|+++|+++.++++||.||.+.+.++|.+|.+.|++++|+|++++++++++++.++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH-----------------HHh----c--c---Cc--------------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL-----------------EAL----S--L---FP-------------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-----------------~~~----~--~---~~-------------- 134 (330)
+++.++.+.+.++++..+++++++++....... ... . . ..
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTT 161 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVALETPKIVIDAAAQADSRRLAQGGLEIPPQAAVAPTDLVRLMYTSGTT 161 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhcccceEEecCcccchhHHHhccCCCCCCCCCCCccceEEEEeCCCCC
Confidence 999999999999999999999988653322110 000 0 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 G~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 241 (497)
T PRK06145 162 DRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTC 241 (497)
T ss_pred CCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeE
Confidence
Q ss_pred --------------------------------------hHHH---------------------------------Hhhcc
Q 048729 135 --------------------------------------QRAR---------------------------------LKARQ 143 (330)
Q Consensus 135 --------------------------------------~~~~---------------------------------~~~~~ 143 (330)
.... ...+.
T Consensus 242 ~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 321 (497)
T PRK06145 242 AWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGST 321 (497)
T ss_pred EEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCc
Confidence 0000 01234
Q ss_pred CCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCC
Q 048729 144 GVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSK 223 (330)
Q Consensus 144 G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~d 223 (330)
|.+++|. ++++.|+ ++.+++.+ +.|||+++|++++.||+++++.+...|. ++||+|||++++|++|.+++.||.|
T Consensus 322 G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~Gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~ 396 (497)
T PRK06145 322 GRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTKGYWKDPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKK 396 (497)
T ss_pred ccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhhhhcCChHHHHHHHh-CCCeeccceEEEcCCCcEEEecccc
Confidence 5556664 6777777 77888777 7899999999999999999999888886 8999999999999999999999999
Q ss_pred CeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceE
Q 048729 224 DVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKV 303 (330)
Q Consensus 224 d~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~ 303 (330)
|+||++|+++++.+||+.+.++|+|.+++|++..++..++++.+++++.+... ...+++.+.++++|+++.+|..+
T Consensus 397 ~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i 472 (497)
T PRK06145 397 DMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGAT----LTLEALDRHCRQRLASFKVPRQL 472 (497)
T ss_pred ceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCC----CCHHHHHHHHHHhhhcCCCCCEE
Confidence 99999999999999999999999999999999998877888999988876544 56789999999999999999999
Q ss_pred EEccCCCCCCCCcccHHHHHHHhh
Q 048729 304 VFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 304 ~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
++++++|+|++||++|++|++++.
T Consensus 473 ~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 473 KVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEeccCCCCCcccccHHHHHHHhc
Confidence 999999999999999999999875
No 39
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=6.3e-45 Score=346.55 Aligned_cols=309 Identities=32% Similarity=0.508 Sum_probs=267.7
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
..|+.++|.+.+..+|+++|+++. ++.+||.||.+++.++|+.|.+.|+++||+|+++++++++++..++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 478999999999999999999974 578999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH------------------------Hhc---------cC-c---
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE------------------------ALS---------LF-P--- 134 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~------------------------~~~---------~~-~--- 134 (330)
++|+++..+.+++.++++..+++++++++.....+.. ... .. .
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAADRAGDTSDNEEILQTDL 186 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhccccCcccccccCCcccE
Confidence 9999999999999999999999999886543321110 000 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 187 a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 266 (546)
T PLN02330 187 CALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRT 266 (546)
T ss_pred EEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHH
Confidence
Q ss_pred ----------------------------------------------------h----HHH--------------------
Q 048729 135 ----------------------------------------------------Q----RAR-------------------- 138 (330)
Q Consensus 135 ----------------------------------------------------~----~~~-------------------- 138 (330)
. ...
T Consensus 267 ~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 346 (546)
T PLN02330 267 FLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITL 346 (546)
T ss_pred HHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEeccccccccccee
Confidence 0 000
Q ss_pred ------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCc
Q 048729 139 ------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGD 206 (330)
Q Consensus 139 ------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 206 (330)
...+.|.|++|. +++++|++++++++.+ +.|||+++|+.++.||+++++.+.+.+..+|||+|||
T Consensus 347 ~~~~~~~~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD 423 (546)
T PLN02330 347 THGDPEKGHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGD 423 (546)
T ss_pred cCCCccccccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEEecchhhhhhccCccchhhhccCCCceeccc
Confidence 001345555664 6777776578888888 8899999999999999999998888787789999999
Q ss_pred eEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHH
Q 048729 207 IGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEI 286 (330)
Q Consensus 207 ~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 286 (330)
+++++++|.++++||.+|++|++|++|++.+||+.+.++|+|.+++|++.++...++.+.++++..++.. .+.+++
T Consensus 424 ~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~----~~~~~l 499 (546)
T PLN02330 424 IGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAK----ESEEDI 499 (546)
T ss_pred EEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCC----CCHHHH
Confidence 9999999999999999999999999999999999999999999999999988878888999998876654 567899
Q ss_pred HHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 287 IEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 287 ~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+.++.+|+.++.|+.+++++++|+|++||++|++|++++..+
T Consensus 500 ~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 500 LNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred HHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998765
No 40
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.1e-44 Score=350.60 Aligned_cols=306 Identities=23% Similarity=0.306 Sum_probs=250.4
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCC-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~-----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
...++.+.+.. ++++++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 85 ~~~n~~~~~~~---~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~ 161 (652)
T TIGR01217 85 ARLNYAENLLR---AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATAS 161 (652)
T ss_pred CeeeHHHHHhc---cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 44566665554 467899988743 5799999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------HHH--------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT---------YLL-------------------------------- 126 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~-------------------------------- 126 (330)
+|++++|+++.++++.+.+++++.+++++++.+... ..+
T Consensus 162 ~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 241 (652)
T TIGR01217 162 VGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGA 241 (652)
T ss_pred hCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCc
Confidence 999999999999999999999999999999864320 000
Q ss_pred ------HHH--hcc-----Cc-----------------------------------------------------------
Q 048729 127 ------LEA--LSL-----FP----------------------------------------------------------- 134 (330)
Q Consensus 127 ------~~~--~~~-----~~----------------------------------------------------------- 134 (330)
... ... ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 321 (652)
T TIGR01217 242 LDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN 321 (652)
T ss_pred ccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhhH
Confidence 000 000 00
Q ss_pred -----------------------------------------------------------------------------h--
Q 048729 135 -----------------------------------------------------------------------------Q-- 135 (330)
Q Consensus 135 -----------------------------------------------------------------------------~-- 135 (330)
.
T Consensus 322 ~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~ 401 (652)
T TIGR01217 322 WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGF 401 (652)
T ss_pred HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHH
Confidence 0
Q ss_pred --H-H-----------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC--cc
Q 048729 136 --R-A-----------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG--CV 181 (330)
Q Consensus 136 --~-~-----------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~--~~ 181 (330)
. . ...+++|.|.+|. +++++|+ +|++++ + +.|||+++|+ ++
T Consensus 402 ~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~-~v~ivd~-~g~~~~-g--~~GEl~v~gp~p~~ 476 (652)
T TIGR01217 402 RWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGT-AVQSWDP-EGKPVT-G--EVGELVCTNPMPSM 476 (652)
T ss_pred HHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCC-ceEEECC-CCCCCC-C--CccEEEEecCCCcc
Confidence 0 0 0012234556665 7888887 788873 5 7899999996 58
Q ss_pred cccccCCchhhh---cccc-CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeec
Q 048729 182 TVGYFKDKEATR---RCIS-DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARP 257 (330)
Q Consensus 182 ~~gy~~~~~~~~---~~~~-~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 257 (330)
+.|||++++.+. ..|. -+|||+|||+|++|+||+++++||.||+||++|++|+|.+||++|.+||+|.+++|++.+
T Consensus 477 ~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~ 556 (652)
T TIGR01217 477 PIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQE 556 (652)
T ss_pred ccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeee
Confidence 999999987543 2222 268999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 258 DMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 258 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
++..++.++++|++.++.... ....++++++++++|+++++|+.|+++++||+|++||++|+.|++.+.
T Consensus 557 ~~~~ge~~~afVv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 557 QPDGGYRVVLFVHLAPGATLD-DALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred cCCCCEEEEEEEEECCCCCCC-HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHc
Confidence 998899999999998765411 012368999999999999999999999999999999999999999874
No 41
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-44 Score=343.03 Aligned_cols=312 Identities=27% Similarity=0.435 Sum_probs=269.2
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
.+....++.++|.+.++.+|+++|+.+.++++||.||.+.+.++|++|.+.|+++||+|+++++|++++++.++||+++|
T Consensus 28 ~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 107 (567)
T PRK06178 28 YPHGERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLG 107 (567)
T ss_pred CCcCcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhC
Confidence 34555789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh---------------------------------------
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL--------------------------------------- 130 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--------------------------------------- 130 (330)
++++|+++..+...+.++++..+++++++.+...+.+....
T Consensus 108 ~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (567)
T PRK06178 108 AVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGA 187 (567)
T ss_pred eEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998765443221100
Q ss_pred -----------cc-----Cc------------------------------------------------------------
Q 048729 131 -----------SL-----FP------------------------------------------------------------ 134 (330)
Q Consensus 131 -----------~~-----~~------------------------------------------------------------ 134 (330)
.. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~ 267 (567)
T PRK06178 188 IDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGEN 267 (567)
T ss_pred ccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHH
Confidence 00 00
Q ss_pred --------------------------------------------h-------------------------------HHH-
Q 048729 135 --------------------------------------------Q-------------------------------RAR- 138 (330)
Q Consensus 135 --------------------------------------------~-------------------------------~~~- 138 (330)
. ...
T Consensus 268 ~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 347 (567)
T PRK06178 268 FGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRW 347 (567)
T ss_pred HHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHH
Confidence 0 000
Q ss_pred -------------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcc
Q 048729 139 -------------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCV 181 (330)
Q Consensus 139 -------------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~ 181 (330)
.+.++|.|++|+ +++++|++++.+++.+ +.|||+++|+++
T Consensus 348 ~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~Gel~v~g~~v 424 (567)
T PRK06178 348 RALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEGEIVVRTPSL 424 (567)
T ss_pred HHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--CceEEEEECCcc
Confidence 001134455554 5677775578888887 889999999999
Q ss_pred cccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCC
Q 048729 182 TVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFW 261 (330)
Q Consensus 182 ~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 261 (330)
+.||+++++.+...+. +|||+|||+++++++|+++++||.+|++|++|.++++.+||+.+.++++|.++++++..++..
T Consensus 425 ~~gY~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~ 503 (567)
T PRK06178 425 LKGYWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDK 503 (567)
T ss_pred cccccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCccc
Confidence 9999999998888876 899999999999999999999999999999999999999999999999999999999988777
Q ss_pred CceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhcC
Q 048729 262 GEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSVS 330 (330)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 330 (330)
++.++++++..++.. .+.+++.+.++++++.+.+|. +.+++++|+|++||++|++|++++++++
T Consensus 504 g~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~~ 567 (567)
T PRK06178 504 GQVPVAFVQLKPGAD----LTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEELK 567 (567)
T ss_pred CcceEEEEEeCCCCc----CCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhhC
Confidence 788889998876654 577899999999999999996 8889999999999999999999998864
No 42
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-44 Score=340.23 Aligned_cols=307 Identities=27% Similarity=0.393 Sum_probs=270.0
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
.+.|+.++|.++++++|+++|+++.++.+||.||.+.+.++++.|.+.|+++||+|++++++++++++.++||+++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccc-chHHHHHH----h---------------------c----------c----
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHL-HTYLLLEA----L---------------------S----------L---- 132 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~-~~~~~~~~----~---------------------~----------~---- 132 (330)
+++++.++.+.+.++++..+++.+++++. ........ . . .
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPAPLVAAALPPD 169 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCcccccccCCCCC
Confidence 99999999999999999999999998865 21111000 0 0 0
Q ss_pred Cc------------------------------------------------------------------------------
Q 048729 133 FP------------------------------------------------------------------------------ 134 (330)
Q Consensus 133 ~~------------------------------------------------------------------------------ 134 (330)
..
T Consensus 170 ~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~~~~~~~~~ 249 (524)
T PRK06188 170 IAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAKFDPAEVLR 249 (524)
T ss_pred eEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCCCCHHHHHH
Confidence 00
Q ss_pred ----------------------------------------------h-HH------------------------------
Q 048729 135 ----------------------------------------------Q-RA------------------------------ 137 (330)
Q Consensus 135 ----------------------------------------------~-~~------------------------------ 137 (330)
. ..
T Consensus 250 ~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~ 329 (524)
T PRK06188 250 AIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRD 329 (524)
T ss_pred HHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchh
Confidence 0 00
Q ss_pred ------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEe
Q 048729 138 ------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMH 211 (330)
Q Consensus 138 ------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~ 211 (330)
....++|.|++|. +++++|+ ++++++.+ +.|||+++|+.++.||++++..+...+. +|||+|||+++++
T Consensus 330 ~~~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~ 404 (524)
T PRK06188 330 HDPDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLVMDGYWNRPEETAEAFR-DGWLHTGDVARED 404 (524)
T ss_pred ccccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcchhhhhcCChHHhhhhhc-CCceeecceEEEc
Confidence 0122457777775 7888888 78888888 8899999999999999999998888876 8999999999999
Q ss_pred cCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHH
Q 048729 212 ADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCR 291 (330)
Q Consensus 212 ~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~ 291 (330)
++|.+++.||.+|++|++|++|+|.+||++|.++++|.+++|++.+++..++.+.+++++.+... ...+++.+.++
T Consensus 405 ~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~ 480 (524)
T PRK06188 405 EDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAA----VDAAELQAHVK 480 (524)
T ss_pred CCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCC----CCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988777888999998876554 56789999999
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 292 ARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 292 ~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++.+..|..++++++||+|++||++|++|++.+.+
T Consensus 481 ~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 481 ERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWE 517 (524)
T ss_pred HhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHh
Confidence 9999999999999999999999999999999999854
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-44 Score=344.45 Aligned_cols=309 Identities=20% Similarity=0.268 Sum_probs=250.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCe----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNT----------TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 81 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~----------~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~ 81 (330)
+...++.++|.+.++++|+++|+++.+. ++||+||.+++.++|++|.+.|+++||+|+++++|++++++.
T Consensus 3 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 3 ASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 4567899999999999999999998654 899999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc--cchHHH-------------------------HHHh----
Q 048729 82 QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH--LHTYLL-------------------------LEAL---- 130 (330)
Q Consensus 82 ~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~--~~~~~~-------------------------~~~~---- 130 (330)
++||+++|++++|+++.++.+++.++++..+++++++++ .....+ ....
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGA 162 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCc
Confidence 999999999999999999999999999999999999854 111100 0000
Q ss_pred -cc-----Cc----------------------------------------------------------------------
Q 048729 131 -SL-----FP---------------------------------------------------------------------- 134 (330)
Q Consensus 131 -~~-----~~---------------------------------------------------------------------- 134 (330)
.. ..
T Consensus 163 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~g~~~~~~~~~ 242 (552)
T PRK09274 163 AAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFGPALGMTSVIPDMD 242 (552)
T ss_pred cccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhhhhhCCeEEecCcc
Confidence 00 00
Q ss_pred -------------------------------------------------------------h----HHHH----------
Q 048729 135 -------------------------------------------------------------Q----RARL---------- 139 (330)
Q Consensus 135 -------------------------------------------------------------~----~~~~---------- 139 (330)
. ...+
T Consensus 243 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~Y 322 (552)
T PRK09274 243 PTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPY 322 (552)
T ss_pred cccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccc
Confidence 0 0000
Q ss_pred ----------------------------hhccCCcccCceeEEEeCCC--------CCcccCCCCceecEEEEecCcccc
Q 048729 140 ----------------------------KARQGVKTVGLAEVDVVNPE--------TGESVKRDGVSLGEVVLRGGCVTV 183 (330)
Q Consensus 140 ----------------------------~~~~G~~~~g~te~~i~d~~--------~g~~~~~~~~~~Gel~v~~~~~~~ 183 (330)
..++|.|++|. +++|+|+. ++++++.+ +.|||+++|++++.
T Consensus 323 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~~~~~~~~~g--~~Gel~v~g~~~~~ 399 (552)
T PRK09274 323 GATEALPISSIESREILFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEWDDALRLATG--EIGEIVVAGPMVTR 399 (552)
T ss_pred cccccceeEeecchhhhccccccccCCCCcccCccCCCc-eEEEEeccccccccccccccCCCC--CeeEEEEecCcccc
Confidence 01345566664 66676641 35667777 88999999999999
Q ss_pred cccCCchhhhccc--cCCC--eEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCC
Q 048729 184 GYFKDKEATRRCI--SDNG--WFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDM 259 (330)
Q Consensus 184 gy~~~~~~~~~~~--~~~g--~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 259 (330)
||+++++.+...+ ..+| ||+|||+|++|++|++++.||.||+||++|.+|+|.+||++|.+||+|.+++|++.+++
T Consensus 400 GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~ 479 (552)
T PRK09274 400 SYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVGVGVP 479 (552)
T ss_pred cccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEEeCCC
Confidence 9999999887665 2356 99999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCC---CCCCCceEEEccCCCCC--CCCcccHHHHHHHhhh
Q 048729 260 FWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLP---RYMVPRKVVFSEELPKT--STGKIQKYLLREFAKS 328 (330)
Q Consensus 260 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~---~~~~p~~~~~v~~lP~t--~~GKv~r~~l~~~~~~ 328 (330)
. ++.++++|++.++.. ....++.+.+++.+. .+..|.+++++++||+| ++||++|++|++++.+
T Consensus 480 ~-~~~~~~~v~~~~~~~----~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~ 548 (552)
T PRK09274 480 G-AQRPVLCVELEPGVA----CSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAK 548 (552)
T ss_pred C-CceEEEEEEccCccc----cchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccccHHHHHHHHHH
Confidence 3 567888888877654 344445555555444 44577889999999999 7999999999998865
No 44
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.1e-44 Score=340.72 Aligned_cols=317 Identities=34% Similarity=0.520 Sum_probs=271.7
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEe--CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Q 048729 4 LLLPNSANSTPLTTLGFLERAAAAYTDCPSLVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 81 (330)
Q Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~--~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~ 81 (330)
...+...+....++.++|.+.++++|+++|+++ .++++||.||.+.+.++|++|.+.|+++||+|++++++++++++.
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~ 86 (558)
T PRK12583 7 YQGGGDKPLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLT 86 (558)
T ss_pred ccCCCCCCcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHH
Confidence 344555667778999999999999999999987 457899999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH-----HHH-----------------------------
Q 048729 82 QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY-----LLL----------------------------- 127 (330)
Q Consensus 82 ~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~----------------------------- 127 (330)
++||+++|++++++++.++.+++.++++..+++++++.+.... .+.
T Consensus 87 ~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (558)
T PRK12583 87 QFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLA 166 (558)
T ss_pred HHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEec
Confidence 9999999999999999999999999999999999988653210 000
Q ss_pred -----------HH---hc------------cC-----c------------------------------------------
Q 048729 128 -----------EA---LS------------LF-----P------------------------------------------ 134 (330)
Q Consensus 128 -----------~~---~~------------~~-----~------------------------------------------ 134 (330)
.. .. .. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~ 246 (558)
T PRK12583 167 PAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLC 246 (558)
T ss_pred CCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 00 00 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 247 ~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G 326 (558)
T PRK12583 247 VPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAG 326 (558)
T ss_pred EecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecC
Confidence
Q ss_pred ------hHH----------------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEE
Q 048729 135 ------QRA----------------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEV 174 (330)
Q Consensus 135 ------~~~----------------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel 174 (330)
... ....++|.|++|. +++++|+ ++.+++.+ +.|||
T Consensus 327 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel 402 (558)
T PRK12583 327 APCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHL-EVKVVDP-DGATVPRG--EIGEL 402 (558)
T ss_pred CCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCC-eEEEECC-CCCCCCCC--CeeEE
Confidence 000 0112455666664 7788888 58888888 88999
Q ss_pred EEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEE
Q 048729 175 VLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVV 254 (330)
Q Consensus 175 ~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~ 254 (330)
+++|+.++.||++++..+...+..++||+|||+++++++|.+++.||.||++|++|.+|+|.+||+.+.++|+|.+++|+
T Consensus 403 ~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~ 482 (558)
T PRK12583 403 CTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVF 482 (558)
T ss_pred EEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999998888775689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 255 ARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+..+...++.++++++..++.. .+.+++.+.++++|+++.+|..+++++++|+|++||++|++|++++.+
T Consensus 483 ~~~~~~~~~~~~~~v~~~~~~~----~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~ 552 (558)
T PRK12583 483 GVPDEKYGEEIVAWVRLHPGHA----ASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIE 552 (558)
T ss_pred eeecCCCCcEEEEEEEECCCCC----CCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHh
Confidence 9988877788899998876654 567899999999999999999999999999999999999999998753
No 45
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-44 Score=338.80 Aligned_cols=311 Identities=37% Similarity=0.606 Sum_probs=274.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
+.+.++.++|.++++.+|+++|+.+.++++||+||.+.++++|++|.+.|+++||+|+++++++++++++++||+++|++
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~ 82 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAV 82 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 45779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-------------------------------c------C-
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS-------------------------------L------F- 133 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-------------------------------~------~- 133 (330)
++++++.++.+.+..+++..++++++++......+..... . .
T Consensus 83 ~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (521)
T PRK06187 83 LHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASDTFDFP 162 (521)
T ss_pred EEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCccCCCC
Confidence 9999999999999999999999999998765443322100 0 0
Q ss_pred c-------------------------------------------------------------------------------
Q 048729 134 P------------------------------------------------------------------------------- 134 (330)
Q Consensus 134 ~------------------------------------------------------------------------------- 134 (330)
.
T Consensus 163 ~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~ 242 (521)
T PRK06187 163 DIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF 242 (521)
T ss_pred CCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC
Confidence 0
Q ss_pred ---------------------------------------------------------h----------------------
Q 048729 135 ---------------------------------------------------------Q---------------------- 135 (330)
Q Consensus 135 ---------------------------------------------------------~---------------------- 135 (330)
.
T Consensus 243 ~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~ 322 (521)
T PRK06187 243 DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVV 322 (521)
T ss_pred CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCccc
Confidence 0
Q ss_pred -----HH------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEe
Q 048729 136 -----RA------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYT 204 (330)
Q Consensus 136 -----~~------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~T 204 (330)
.. ....+.|.+++|. +++|+|+ ++.+++.+.++.|||+++|+.++.||+++++.+.+.|. +|||+|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-~~~~~t 399 (521)
T PRK06187 323 SVLPPEDQLPGQWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETID-GGWLHT 399 (521)
T ss_pred ccCCcccccccccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhh-CCceec
Confidence 00 0223456667774 7888888 78888883238899999999999999999998888887 789999
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHH
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEK 284 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 284 (330)
||+++++++|.+++.||.+|++|++|.++++.+||+.+.++++|.++++++..++..++++.++++..++.. .+.+
T Consensus 400 GD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 475 (521)
T PRK06187 400 GDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGAT----LDAK 475 (521)
T ss_pred cceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCC----CCHH
Confidence 999999999999999999999999999999999999999999999999999988877889999999887765 6789
Q ss_pred HHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 285 EIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 285 ~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
++.+.++++++++.+|..++++++||+|++||++|..|+++|++-
T Consensus 476 ~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 476 ELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred HHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999764
No 46
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.4e-44 Score=340.42 Aligned_cols=313 Identities=31% Similarity=0.461 Sum_probs=269.9
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 9 SANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
|.....+|+.+.|.+.+..+|+++|+.+.++.+||.||.+.++++|++|.+.|+++||+|+++++++++++..++||+++
T Consensus 11 ~~~~~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~ 90 (542)
T PRK07786 11 PYLARRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANML 90 (542)
T ss_pred CCcccccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 44556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH------------------------------h-cc-----
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA------------------------------L-SL----- 132 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------------------~-~~----- 132 (330)
|++++|+++.++.+.+..+++..+++++++++.....+... . ..
T Consensus 91 G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (542)
T PRK07786 91 GAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGPAHAPVD 170 (542)
T ss_pred CeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCCCCCCCC
Confidence 99999999999999999999999999999875443221100 0 00
Q ss_pred C----c--------------------------------------------------------------------------
Q 048729 133 F----P-------------------------------------------------------------------------- 134 (330)
Q Consensus 133 ~----~-------------------------------------------------------------------------- 134 (330)
. .
T Consensus 171 ~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~ 250 (542)
T PRK07786 171 IPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLG 250 (542)
T ss_pred CCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCC
Confidence 0 0
Q ss_pred -----------------------------------------------------------hHH------------------
Q 048729 135 -----------------------------------------------------------QRA------------------ 137 (330)
Q Consensus 135 -----------------------------------------------------------~~~------------------ 137 (330)
...
T Consensus 251 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 330 (542)
T PRK07786 251 AFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSP 330 (542)
T ss_pred CcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccccccc
Confidence 000
Q ss_pred -----------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCc
Q 048729 138 -----------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGD 206 (330)
Q Consensus 138 -----------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 206 (330)
....++|.|++|. +++|+|+ ++++++.+ +.|||+++|+.++.||+++++.+...|. +|||+|||
T Consensus 331 ~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~f~-~~~~~TGD 405 (542)
T PRK07786 331 VTCMLLGEDAIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRAPTLMSGYWNNPEATAEAFA-GGWFHSGD 405 (542)
T ss_pred ceEecCcccccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEEChhhhhhhcCCHHHHHHHhh-CCcccccc
Confidence 0112345555664 6777776 77888877 8899999999999999999999988886 89999999
Q ss_pred eEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHH
Q 048729 207 IGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEI 286 (330)
Q Consensus 207 ~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 286 (330)
+++++++|.++++||.+|++|++|.+|++.+||+.+.++|+|.+++|++...+..++.++++++...+... ...+++
T Consensus 406 l~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l 482 (542)
T PRK07786 406 LVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAA---LTLEDL 482 (542)
T ss_pred eEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCC---CCHHHH
Confidence 99999999999999999999999999999999999999999999999998877667788888887654321 467899
Q ss_pred HHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 287 IEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 287 ~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+.+++++++|++|..++++++||+|++||++|++|++++.+.
T Consensus 483 ~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 483 AEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred HHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999765
No 47
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-44 Score=347.93 Aligned_cols=310 Identities=26% Similarity=0.347 Sum_probs=258.7
Q ss_pred CCH-HHHHHHHHHhcCCCcEEEeC------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 15 LTT-LGFLERAAAAYTDCPSLVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 15 ~~~-~~~l~~~~~~~p~~~a~~~~------~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
.|+ .++|.+.++.+|+++|+++. .+++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 344 56777788889999999962 36899999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------HHHH-------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT---------YLLL------------------------------- 127 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~------------------------------- 127 (330)
+|++++|+++.++++.+.++++..+++++++.+... ..+.
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 211 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDV 211 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcc
Confidence 999999999999999999999999999999864310 0000
Q ss_pred ------HH-h-cc-----Cc------------------------------------------------------------
Q 048729 128 ------EA-L-SL-----FP------------------------------------------------------------ 134 (330)
Q Consensus 128 ------~~-~-~~-----~~------------------------------------------------------------ 134 (330)
.. . .. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 291 (629)
T PRK10524 212 DYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHS 291 (629)
T ss_pred cHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccch
Confidence 00 0 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 292 ~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~ 371 (629)
T PRK10524 292 YIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPT 371 (629)
T ss_pred HHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHH
Confidence
Q ss_pred -------------------hH--------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC--
Q 048729 135 -------------------QR--------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG-- 179 (330)
Q Consensus 135 -------------------~~--------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~-- 179 (330)
+. .....+.|.|++|. +++|+|+++|++++.+ +.|||+++|+
T Consensus 372 ~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g--~~Gel~i~gp~~ 448 (629)
T PRK10524 372 ASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN--EKGVLVIEGPLP 448 (629)
T ss_pred HHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC--CcEEEEEcCCCC
Confidence 00 00112456777886 8888887688999888 8899999998
Q ss_pred -cccccccCCchhhhcccc---CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEe
Q 048729 180 -CVTVGYFKDKEATRRCIS---DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVA 255 (330)
Q Consensus 180 -~~~~gy~~~~~~~~~~~~---~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 255 (330)
..+.|||++++...+.+. .++||+|||++++|++|+++++||.||+||++|++|+|.+||++|.+||+|.+++|++
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg 528 (629)
T PRK10524 449 PGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVG 528 (629)
T ss_pred hhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEc
Confidence 578899999876655432 3689999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeEEEEEecCCcccCC----CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 256 RPDMFWGEIPCAFVSLKRDLELTK----KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 256 ~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
.+++..++.++++++++++..... ....+++++.++++|+++++|..|+++++||+|++||++|+.|++.+.
T Consensus 529 ~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 529 VKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAE 604 (629)
T ss_pred cccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHc
Confidence 999888889999999877543110 013578899999999999999999999999999999999999999864
No 48
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-44 Score=338.94 Aligned_cols=306 Identities=27% Similarity=0.341 Sum_probs=259.2
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
..++.++|...+. ++++++++.++++||.||.+++.++|++|.+. |++++++|+++++|++++++.++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 4578899988774 89999999999999999999999999999976 89999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH-----------------hc---c-------Cc-----------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA-----------------LS---L-------FP----------- 134 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----------------~~---~-------~~----------- 134 (330)
+|+++.++.+++.++++..++++++++......+... .. . ..
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TS 161 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDAEPPFRVADPDDLFMLIFTS 161 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCCCCCcccCCccceEEEEECC
Confidence 9999999999999999999999999987554432210 00 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 GTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~ 241 (529)
T PRK07867 162 GTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYG 241 (529)
T ss_pred CCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhC
Confidence
Q ss_pred ---------------------------------------hHHHHhhccCCc---ccCceeE-------------------
Q 048729 135 ---------------------------------------QRARLKARQGVK---TVGLAEV------------------- 153 (330)
Q Consensus 135 ---------------------------------------~~~~~~~~~G~~---~~g~te~------------------- 153 (330)
....+....|.+ .||.||.
T Consensus 242 vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~~~gg~~~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~g~~~ 321 (529)
T PRK07867 242 ATYANYVGKPLSYVLATPERPDDADNPLRIVYGNEGAPGDIARFARRFGCVVVDGFGSTEGGVAITRTPDTPPGALGPLP 321 (529)
T ss_pred CeEEeccHHHHHHHHhCCCcccccccceEEEecCCCChHHHHHHHHHhCCcEEEeecccccccccccCCCCCCCCcCCCC
Confidence 000001112222 2677663
Q ss_pred ---EEeCCCCCcccCCCCce------------ecEEEE-ecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEE
Q 048729 154 ---DVVNPETGESVKRDGVS------------LGEVVL-RGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVE 217 (330)
Q Consensus 154 ---~i~d~~~g~~~~~~~~~------------~Gel~v-~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~ 217 (330)
++++++++.+++.+ + .|||++ +|++++.||+++++.+...+. +|||+|||+++++++|.++
T Consensus 322 ~~~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~ 398 (529)
T PRK07867 322 PGVAIVDPDTGTECPPA--EDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMR-GGVYWSGDLAYRDADGYAY 398 (529)
T ss_pred CCEEEEECCCCCCCCCC--ccccccccccCCcceEEEEecCCcccccccCChHhhhhhhc-CCeEeeccEEEEeCCCcEE
Confidence 33443456666665 4 799999 999999999999998888786 8999999999999999999
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhc--CC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRAR--LP 295 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~--l~ 295 (330)
+.||.||++|++|++|+|.+||+.|.++|+|.+++|++..++..++++.+++++.++.. .+.+++.++++.+ |+
T Consensus 399 ~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~----~~~~~l~~~~~~~~~l~ 474 (529)
T PRK07867 399 FAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAK----FDPDAFAEFLAAQPDLG 474 (529)
T ss_pred EeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCC----CCHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999888899999999887755 6788999999875 99
Q ss_pred CCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 296 RYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 296 ~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++|..+++++++|+|++||++|++|++++..
T Consensus 475 ~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 475 PKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred cccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 999999999999999999999999999998743
No 49
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-44 Score=343.04 Aligned_cols=314 Identities=23% Similarity=0.326 Sum_probs=254.2
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
.-+.++.+.|.+.++.+|+++|+++. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 11 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G 90 (540)
T PRK05857 11 QLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLG 90 (540)
T ss_pred cCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 34568999999999999999999853 4689999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH---HHH------------------------H--------------
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY---LLL------------------------E-------------- 128 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---~~~------------------------~-------------- 128 (330)
++++|+++.++.+++.++++..+++.+++++.... .+. .
T Consensus 91 ~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
T PRK05857 91 AIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGSED 170 (540)
T ss_pred eEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCCCC
Confidence 99999999999999999999999999887653210 000 0
Q ss_pred -----------------------------Hhc----c-------------Cc----------------------------
Q 048729 129 -----------------------------ALS----L-------------FP---------------------------- 134 (330)
Q Consensus 129 -----------------------------~~~----~-------------~~---------------------------- 134 (330)
... . .+
T Consensus 171 ~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~~~~~~ 250 (540)
T PRK05857 171 PLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVTGGENTT 250 (540)
T ss_pred eEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEecCCChh
Confidence 000 0 00
Q ss_pred ---------------------------------------------------hH---------------------------
Q 048729 135 ---------------------------------------------------QR--------------------------- 136 (330)
Q Consensus 135 ---------------------------------------------------~~--------------------------- 136 (330)
..
T Consensus 251 ~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~ 330 (540)
T PRK05857 251 SLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETGCTALCLP 330 (540)
T ss_pred HHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHHHhCCeeecccCCCcCCceeeecc
Confidence 00
Q ss_pred -------HHHhhccCCcccCceeEEEeCCCCCc-ccCCC---CceecEEEEecCcccccccCCchhhhccccCCCeEEeC
Q 048729 137 -------ARLKARQGVKTVGLAEVDVVNPETGE-SVKRD---GVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTG 205 (330)
Q Consensus 137 -------~~~~~~~G~~~~g~te~~i~d~~~g~-~~~~~---~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TG 205 (330)
.....++|.+++|. +++|+|+ ++. +++.+ .++.|||+++|++++.||+++++.+.+.|. +|||+||
T Consensus 331 ~~~~~~~~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TG 407 (540)
T PRK05857 331 TDDGSIVKIEAGAVGRPYPGV-DVYLAAT-DGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLI-DGWVNTG 407 (540)
T ss_pred cccccccccccCCcCcccCCc-EEEEECc-cccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcC-CCceecc
Confidence 00113456666775 7777776 443 23211 126799999999999999999999888886 8999999
Q ss_pred ceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC-CCCHH
Q 048729 206 DIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK-KPTEK 284 (330)
Q Consensus 206 D~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~ 284 (330)
|+|++|++|++++.||.||+||++|++|+|.+||+.|..||+|.+++|++.++...++.+.++++..+...... ....+
T Consensus 408 Dlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~ 487 (540)
T PRK05857 408 DLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKH 487 (540)
T ss_pred ceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777777877777655422100 01123
Q ss_pred HHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 285 EIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 285 ~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+.+.++++++++.+|..+++++++|+|++||++|++|++.+++
T Consensus 488 ~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 488 TIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhh
Confidence 44455567799999999999999999999999999999999874
No 50
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-44 Score=345.57 Aligned_cols=306 Identities=26% Similarity=0.418 Sum_probs=259.7
Q ss_pred HHHHHHHHHH-hcCCCcEEEeC----CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 17 TLGFLERAAA-AYTDCPSLVYN----NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 17 ~~~~l~~~~~-~~p~~~a~~~~----~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
+.+++.+.+. .+|+++|+.+. .+++||+||.+.+.++|.+|.+.|+++||+|+++++|++++++.+|||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 4467777776 57999999874 368999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH---------------------------HH----hc---------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL---------------------------EA----LS--------- 131 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~---------------------------~~----~~--------- 131 (330)
++|+++.++++++.++++..+++++++++....... .. ..
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASDEFDIEWTDR 204 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCCcCCccccCC
Confidence 999999999999999999999999998754321110 00 00
Q ss_pred -cCc----------------------------------------------------------------------------
Q 048729 132 -LFP---------------------------------------------------------------------------- 134 (330)
Q Consensus 132 -~~~---------------------------------------------------------------------------- 134 (330)
...
T Consensus 205 ~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~ 284 (570)
T PRK04319 205 EDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSP 284 (570)
T ss_pred CCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCH
Confidence 000
Q ss_pred --------------------------------------------------------------------------hH----
Q 048729 135 --------------------------------------------------------------------------QR---- 136 (330)
Q Consensus 135 --------------------------------------------------------------------------~~---- 136 (330)
+.
T Consensus 285 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~ 364 (570)
T PRK04319 285 ERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIM 364 (570)
T ss_pred HHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEE
Confidence 00
Q ss_pred -------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEec--CcccccccCCchhhhccccCCCeEEeCce
Q 048729 137 -------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRG--GCVTVGYFKDKEATRRCISDNGWFYTGDI 207 (330)
Q Consensus 137 -------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~g~~~TGD~ 207 (330)
.....++|.|++|. +++|+|+ ++.+++.+ +.|||+++| ++++.||+++++.+.+.|. +|||+|||+
T Consensus 365 ~~~~~~~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~-~gw~~TGDl 439 (570)
T PRK04319 365 IANYPAMDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIKKGWPSMMRGIWNNPEKYESYFA-GDWYVSGDS 439 (570)
T ss_pred EecCCCCCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEcCCCChHHhHhcCCHHHhhhhhc-CCceEeCcE
Confidence 00123456667775 7888887 78888777 889999997 7899999999999988887 899999999
Q ss_pred EEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHH
Q 048729 208 GVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEII 287 (330)
Q Consensus 208 ~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 287 (330)
++++++|.++++||.||+||.+|++|+|.+||+.+.++|+|.+++|++.+++..++.+.+++++.++.... ....+++.
T Consensus 440 ~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~-~~~~~~l~ 518 (570)
T PRK04319 440 AYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPS-EELKEEIR 518 (570)
T ss_pred EEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCC-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888999999887764310 02236899
Q ss_pred HHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 288 EYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 288 ~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++++|+.|.+|..++++++||+|++||++|++|++++.+
T Consensus 519 ~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 519 GFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred HHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 99999999999999999999999999999999999998644
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.9e-44 Score=340.03 Aligned_cols=311 Identities=30% Similarity=0.500 Sum_probs=265.2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcEEEeCC-eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 11 NSTPLTTLGFLERAAAAYTDCPSLVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~~a~~~~~-~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
.+...|+.++|.+.++.+||++|+++.. +++||+||.+++.++|++|.+.|+++||+|+++++|++++++.++||+++|
T Consensus 19 ~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G 98 (547)
T PRK06087 19 YWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVG 98 (547)
T ss_pred CCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 3445689999999999999999999865 799999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch-----HHHHH----------------------------Hh------
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT-----YLLLE----------------------------AL------ 130 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~----------------------------~~------ 130 (330)
++++|+++.++.+++.++++..++++++++.... ..+.. ..
T Consensus 99 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (547)
T PRK06087 99 AVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEPL 178 (547)
T ss_pred cEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCcc
Confidence 9999999999999999999999999998864210 00000 00
Q ss_pred -cc--Cc-------------------------------------------------------------------------
Q 048729 131 -SL--FP------------------------------------------------------------------------- 134 (330)
Q Consensus 131 -~~--~~------------------------------------------------------------------------- 134 (330)
.. ..
T Consensus 179 ~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~ 258 (547)
T PRK06087 179 TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSV 258 (547)
T ss_pred cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEE
Confidence 00 00
Q ss_pred ----------------------------------------------------------hH--------------------
Q 048729 135 ----------------------------------------------------------QR-------------------- 136 (330)
Q Consensus 135 ----------------------------------------------------------~~-------------------- 136 (330)
..
T Consensus 259 ~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~~~~l~~~YG~TE~ 338 (547)
T PRK06087 259 LLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTES 338 (547)
T ss_pred ecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHcCCcEEEEeccccc
Confidence 00
Q ss_pred ------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEe
Q 048729 137 ------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYT 204 (330)
Q Consensus 137 ------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~T 204 (330)
.....+.|.+++|. +++++|+ ++.+++.+ +.|||+++|++++.||+++++.+...+..+|||+|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~T 414 (547)
T PRK06087 339 SPHAVVNLDDPLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEASRGPNVFMGYLDEPELTARALDEEGWYYS 414 (547)
T ss_pred CCccccCCCcchhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEEEecccccccccCCHHHHHHHhCCCCCcCc
Confidence 00012346666774 7788887 78888887 88999999999999999999998888877899999
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHH
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEK 284 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 284 (330)
||++++|++|.++++||.+|+|+.+|++|+|.+||+.+.++|+|.++++++..++..+++++++++..+... ..+.+
T Consensus 415 GDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~---~~~~~ 491 (547)
T PRK06087 415 GDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH---SLTLE 491 (547)
T ss_pred CceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC---CCCHH
Confidence 999999999999999999999999999999999999999999999999999988877889999998876321 15678
Q ss_pred HHHHHHH-hcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 285 EIIEYCR-ARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 285 ~l~~~l~-~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++.+.+. +.++++++|..|.++++||+|++||++|+.|++++.+
T Consensus 492 ~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~ 536 (547)
T PRK06087 492 EVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMR 536 (547)
T ss_pred HHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHH
Confidence 8888875 5799999999999999999999999999999887753
No 52
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-43 Score=337.49 Aligned_cols=320 Identities=52% Similarity=0.829 Sum_probs=266.9
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Q 048729 4 LLLPNSANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 83 (330)
Q Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~l 83 (330)
-...+..+..++++.++|.+.++.+|+++|+.+.+.++||+||.+.+.++|.+|.+.|+++||+|+++++++++++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 86 (545)
T PRK08162 7 GLDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHF 86 (545)
T ss_pred ccCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHH
Confidence 33444555667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh---------------------------------
Q 048729 84 GVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL--------------------------------- 130 (330)
Q Consensus 84 a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--------------------------------- 130 (330)
||+++|++++|+++.++.+.+.++++..+++.+++++.....+....
T Consensus 87 A~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (545)
T PRK08162 87 GVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFL 166 (545)
T ss_pred HHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHh
Confidence 99999999999999999999999999999999998764432211100
Q ss_pred -----------cc---Cc--------------------------------------------------------------
Q 048729 131 -----------SL---FP-------------------------------------------------------------- 134 (330)
Q Consensus 131 -----------~~---~~-------------------------------------------------------------- 134 (330)
.. ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~ 246 (545)
T PRK08162 167 ASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAA 246 (545)
T ss_pred ccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHH
Confidence 00 00
Q ss_pred ----------------------------------------------------------------hHHHHhhccCC---cc
Q 048729 135 ----------------------------------------------------------------QRARLKARQGV---KT 147 (330)
Q Consensus 135 ----------------------------------------------------------------~~~~~~~~~G~---~~ 147 (330)
.........|. ..
T Consensus 247 ~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 326 (545)
T PRK08162 247 RAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEIGFDLTHV 326 (545)
T ss_pred HccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHhCCceeec
Confidence 00000000111 12
Q ss_pred cCcee--------------------------------------EEEeCCCCCcccCCCCceecEEEEecCcccccccCCc
Q 048729 148 VGLAE--------------------------------------VDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDK 189 (330)
Q Consensus 148 ~g~te--------------------------------------~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 189 (330)
||.|| +.++|++++.+++.++.+.|||+++|+.++.||++++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCCh
Confidence 45444 3444544566666543256999999999999999999
Q ss_pred hhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEE
Q 048729 190 EATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFV 269 (330)
Q Consensus 190 ~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 269 (330)
+.+...|. +|||+|||++++|++|.++++||.||++|++|.+|++.+||+.|.++|+|.+++|++.+++..++.+++++
T Consensus 407 ~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v 485 (545)
T PRK08162 407 KATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFV 485 (545)
T ss_pred hhhHHHhh-CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEE
Confidence 99988887 89999999999999999999999999999999999999999999999999999999998877778899999
Q ss_pred EecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 270 SLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
++.++.. .+.+++.+.++++|+++.+|..+++ .++|+|++||++|+.|++.+.+|
T Consensus 486 ~~~~~~~----~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l 540 (545)
T PRK08162 486 ELKDGAS----ATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSL 540 (545)
T ss_pred EeCCCCC----CCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhh
Confidence 8877654 5678999999999999999999876 68999999999999999998776
No 53
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.7e-44 Score=338.14 Aligned_cols=303 Identities=29% Similarity=0.470 Sum_probs=261.2
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
...++.++|.+.++.+|+++|+++.++++||+||.+.++++|.+|.+.|+++||+|+++++|++++++.++|++++|+++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccch--------HHHHH-------------------------Hh--c----cC
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHT--------YLLLE-------------------------AL--S----LF 133 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~--------~~~~~-------------------------~~--~----~~ 133 (330)
+++++.++.+.+.++++..+++++++..... ..+.. .. . ..
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPAEPVKFPPT 180 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcCccccCCCC
Confidence 9999999999999999999999999875321 00000 00 0 00
Q ss_pred c-------------------------------------------------------------------------------
Q 048729 134 P------------------------------------------------------------------------------- 134 (330)
Q Consensus 134 ~------------------------------------------------------------------------------- 134 (330)
.
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~ 260 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDP 260 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCC
Confidence 0
Q ss_pred ------------------------------------------------------hHHH----------------------
Q 048729 135 ------------------------------------------------------QRAR---------------------- 138 (330)
Q Consensus 135 ------------------------------------------------------~~~~---------------------- 138 (330)
....
T Consensus 261 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~ 340 (527)
T TIGR02275 261 SPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNY 340 (527)
T ss_pred CHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccc
Confidence 0000
Q ss_pred ---------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEE
Q 048729 139 ---------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGV 209 (330)
Q Consensus 139 ---------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~ 209 (330)
...+.|.|+.+.++++++|+ +|++++.+ +.|||+++|++++.||+++++.+...+..+|||+|||+++
T Consensus 341 ~~~~~~~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~ 417 (527)
T TIGR02275 341 TRLDDPAEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVR 417 (527)
T ss_pred cCCCCccccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEE
Confidence 01234555532236777776 77888877 8899999999999999999999988888799999999999
Q ss_pred EecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHH
Q 048729 210 MHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEY 289 (330)
Q Consensus 210 ~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 289 (330)
++++|++++.||.+|+||++|.+|+|.+||+.|.++|+|.+++|++..++..+++++++++..++. .+..++.+.
T Consensus 418 ~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~-----~~~~~l~~~ 492 (527)
T TIGR02275 418 LTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPA-----LKAAQLRRF 492 (527)
T ss_pred EcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCC-----CCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988888999999876653 567899999
Q ss_pred HHhc-CCCCCCCceEEEccCCCCCCCCcccHHHHH
Q 048729 290 CRAR-LPRYMVPRKVVFSEELPKTSTGKIQKYLLR 323 (330)
Q Consensus 290 l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 323 (330)
++++ ++++++|..+.+++++|+|++||++|++|+
T Consensus 493 l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 493 LRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred HHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 9985 999999999999999999999999999874
No 54
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.1e-44 Score=339.82 Aligned_cols=308 Identities=30% Similarity=0.490 Sum_probs=264.6
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
...++.++|...+..+|+++|+++.++.+||+||.+.+.++|++|.+.|+++||+|+++++++++++.++|||+++|+++
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHH----------------------------------------------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLL---------------------------------------------- 126 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~---------------------------------------------- 126 (330)
+|+++.++.+++.++++..+++++++++.....+
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccccc
Confidence 9999999999999999999999998865221100
Q ss_pred ------HHH------------h--ccCc----------------------------------------------------
Q 048729 127 ------LEA------------L--SLFP---------------------------------------------------- 134 (330)
Q Consensus 127 ------~~~------------~--~~~~---------------------------------------------------- 134 (330)
... . ....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 261 (563)
T PRK06710 182 ETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHV 261 (563)
T ss_pred chhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHH
Confidence 000 0 0000
Q ss_pred -----------------------------------------------------------------------------hHH
Q 048729 135 -----------------------------------------------------------------------------QRA 137 (330)
Q Consensus 135 -----------------------------------------------------------------------------~~~ 137 (330)
...
T Consensus 262 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~ 341 (563)
T PRK06710 262 YGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQE 341 (563)
T ss_pred HHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHH
Confidence 000
Q ss_pred H-------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCccccccc
Q 048729 138 R-------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 186 (330)
Q Consensus 138 ~-------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~ 186 (330)
. ...+.|.++.|. ++++++++++.+++.+ +.|||+++|+.++.||+
T Consensus 342 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~~Gel~v~g~~~~~gY~ 418 (563)
T PRK06710 342 KFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--EIGEIVVKGPQIMKGYW 418 (563)
T ss_pred HHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCC-eEEEEECCCCccCCCC--CceEEEEecCccchhhh
Confidence 0 011234444553 5566665577888888 78999999999999999
Q ss_pred CCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeE
Q 048729 187 KDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPC 266 (330)
Q Consensus 187 ~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 266 (330)
++++.+...+. +|||+|||+++++++|.+++.||.||+||++|.+|+|.+||+.+.++|+|.+++|++..++..++.++
T Consensus 419 ~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 497 (563)
T PRK06710 419 NKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVK 497 (563)
T ss_pred CChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeE
Confidence 99999888886 89999999999999999999999999999999999999999999999999999999999887788899
Q ss_pred EEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 267 AFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 267 ~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++..++.. .+.+++.+.++++++++.+|..+.+++++|+|++||++|++|++++..
T Consensus 498 ~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 498 AFVVLKEGTE----CSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred EEEEECCCCC----CCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhh
Confidence 9998877654 567899999999999999999999999999999999999999998753
No 55
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3e-45 Score=405.64 Aligned_cols=304 Identities=21% Similarity=0.276 Sum_probs=267.1
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
..++.++|.++++.+||++|+++.++++||+||.++++++|++|.+.|+++||+|++++++++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc----------------cC------c-----------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS----------------LF------P----------------- 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~----------------~~------~----------------- 134 (330)
|+++.++.+++.++++..++++++++......+..... .. +
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PK 3253 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNGYSENNPSTRVMGENLAYVIYTSGSTGKPK 3253 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcccCCCCCcccCCCCceEEEEEccCCCCCcc
Confidence 99999999999999999999999998655433211000 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 3254 gV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~ 3333 (3956)
T PRK12467 3254 GVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACF 3333 (3956)
T ss_pred eeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEc
Confidence
Q ss_pred ---------------------------------------------------------------hH-H-----HHhhccCC
Q 048729 135 ---------------------------------------------------------------QR-A-----RLKARQGV 145 (330)
Q Consensus 135 ---------------------------------------------------------------~~-~-----~~~~~~G~ 145 (330)
.. . ....++|+
T Consensus 3334 ~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~ 3413 (3956)
T PRK12467 3334 PPAYLQQFAEDAGGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR 3413 (3956)
T ss_pred CHHHHHHHHhcccccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCcc
Confidence 00 0 01135677
Q ss_pred cccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCC-------eEEeCceEEEecCceEEE
Q 048729 146 KTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNG-------WFYTGDIGVMHADGYVEI 218 (330)
Q Consensus 146 ~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g-------~~~TGD~~~~~~~G~l~~ 218 (330)
|+.|. ++.|+|+ ++++++.| +.|||+|+|+.+++||+++|+.+.+.|..++ ||+|||+|++++||+++|
T Consensus 3414 p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~ 3489 (3956)
T PRK12467 3414 PVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEY 3489 (3956)
T ss_pred ccCCC-EEEEECC-CCCCCCCC--CCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEE
Confidence 77775 7888887 78999998 8999999999999999999999999886543 699999999999999999
Q ss_pred EecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCC
Q 048729 219 KDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYM 298 (330)
Q Consensus 219 ~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 298 (330)
+||+||+||++|++|+|.+||+.|.++|+|.+++|++... ..+++++++++...... ...+++++.++++|+.|+
T Consensus 3490 ~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~----~~~~~l~~~l~~~Lp~y~ 3564 (3956)
T PRK12467 3490 LGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQG----DWRETLRDHLAASLPDYM 3564 (3956)
T ss_pred eccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCc----ccHHHHHHHHhccCChhh
Confidence 9999999999999999999999999999999999998754 35678999998776543 567899999999999999
Q ss_pred CCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 299 VPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 299 ~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
+|..|+++++||+|++||+||++|.+..
T Consensus 3565 vP~~~~~l~~lP~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3565 VPAQLLVLAAMPLGPNGKVDRKALPDPD 3592 (3956)
T ss_pred CCCeeeeeccCCCCCCCccchhhcCCCC
Confidence 9999999999999999999999998754
No 56
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-43 Score=338.15 Aligned_cols=305 Identities=30% Similarity=0.454 Sum_probs=262.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
..+.++.++|.+.++.+|+++|+++.++.+||.||.+.++++|++|.+.|+++||+|+++++|++++++.++||+++|++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~ 99 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYV 99 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeE
Confidence 33468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH------------------------------------------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA------------------------------------------ 129 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------------------------------ 129 (330)
++|+++.++.+++.++++..+++++++++.....+...
T Consensus 100 ~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (557)
T PRK07059 100 VVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLP 179 (557)
T ss_pred EeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCC
Confidence 99999999999999999999888888644321110000
Q ss_pred --------h---c--c---------------------------------------------------------------C
Q 048729 130 --------L---S--L---------------------------------------------------------------F 133 (330)
Q Consensus 130 --------~---~--~---------------------------------------------------------------~ 133 (330)
. . . .
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (557)
T PRK07059 180 GHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCAL 259 (557)
T ss_pred CcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeC
Confidence 0 0 0 0
Q ss_pred c-------------------------------------------------------------------------------
Q 048729 134 P------------------------------------------------------------------------------- 134 (330)
Q Consensus 134 ~------------------------------------------------------------------------------- 134 (330)
+
T Consensus 260 pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~ 339 (557)
T PRK07059 260 PLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAV 339 (557)
T ss_pred CcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccC
Confidence 0
Q ss_pred ---hHH-------------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCc
Q 048729 135 ---QRA-------------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGC 180 (330)
Q Consensus 135 ---~~~-------------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~ 180 (330)
... ....+.|.|+.|. +++++|+ +|++++.+ +.|||+++|+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~-~~~~~~~g--~~Gel~v~g~~ 415 (557)
T PRK07059 340 QRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPST-EVSIRDD-DGNDLPLG--EPGEICIRGPQ 415 (557)
T ss_pred CHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCCc-EEEEECC-CCCCCCCC--CceEEEEeCCc
Confidence 000 0113456666664 7788887 78888888 88999999999
Q ss_pred ccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCC
Q 048729 181 VTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMF 260 (330)
Q Consensus 181 ~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 260 (330)
++.||+++++.+.+.+..+|||+|||+++++++|.++++||.+|++|++|++|+|.+||+.+.++|+|.+++|++..+..
T Consensus 416 ~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~ 495 (557)
T PRK07059 416 VMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVGVPDEH 495 (557)
T ss_pred cchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEecccCC
Confidence 99999999999888887789999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 261 WGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 261 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
.++.++++++..... ...+++.+.+.++++.+..|..+.+++++|+|++||++|+.|+++
T Consensus 496 ~ge~~~~~v~~~~~~-----~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 496 SGEAVKLFVVKKDPA-----LTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred CCeeEEEEEEeCCCC-----CCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 788888888765432 567899999999999999999999999999999999999999875
No 57
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=5.3e-44 Score=336.89 Aligned_cols=307 Identities=19% Similarity=0.242 Sum_probs=254.0
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 95 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l 95 (330)
++.+.|.+.+..+|+++|+.+.++++||.||.+++.++|+.|.+.|+++||+|+++++|+.++++.+|||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccchHH--------------HHHHhc------cCc---------------------
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHTYL--------------LLEALS------LFP--------------------- 134 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------------~~~~~~------~~~--------------------- 134 (330)
++.++.+.+.++++..+++.++++...... +..... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~ 160 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAVGTQIITLSALEQAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQ 160 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEecccccccccCCceEEchHhhhhhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEE
Confidence 999999999999999999999987643211 000000 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 161 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p 240 (502)
T TIGR01734 161 ISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTP 240 (502)
T ss_pred EecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEECh
Confidence
Q ss_pred ---------------------------------hHHHHh------------------------------------hccCC
Q 048729 135 ---------------------------------QRARLK------------------------------------ARQGV 145 (330)
Q Consensus 135 ---------------------------------~~~~~~------------------------------------~~~G~ 145 (330)
....+. .++|.
T Consensus 241 ~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~ 320 (502)
T TIGR01734 241 SFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGF 320 (502)
T ss_pred hHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCcccccc
Confidence 000000 12333
Q ss_pred cccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc---CCCeEEeCceEEEecCceEEEEecC
Q 048729 146 KTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS---DNGWFYTGDIGVMHADGYVEIKDRS 222 (330)
Q Consensus 146 ~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~g~~~TGD~~~~~~~G~l~~~GR~ 222 (330)
+.+|+ +++|+|+ ++.+++.+ +.|||+++|+.++.||+++++.+.+.|. ..+||+|||+|++|++ ++++.||.
T Consensus 321 ~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~ 395 (502)
T TIGR01734 321 AKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRL 395 (502)
T ss_pred ccCCC-EEEEECC-CCCCCCCC--CeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccc
Confidence 34443 4556666 67888877 8899999999999999999988776652 2369999999999966 99999999
Q ss_pred CCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeec-CCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCc
Q 048729 223 KDVIISGGENICSAEVESVLYSITAVNEAAVVARP-DMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPR 301 (330)
Q Consensus 223 dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~ 301 (330)
+|+||++|++|+|.+||+.+.++|+|.++++++.. .....+.++++++.............+++++.++++++++.+|.
T Consensus 396 ~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~ 475 (502)
T TIGR01734 396 DFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPR 475 (502)
T ss_pred cCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCc
Confidence 99999999999999999999999999999999965 44445678888887665432221234788999999999999999
Q ss_pred eEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 302 KVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 302 ~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
.++++++||+|++||++|++|++++.
T Consensus 476 ~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 476 KFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred EEEEccccCCCCCCcccHHHHHHhhc
Confidence 99999999999999999999999875
No 58
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-43 Score=334.24 Aligned_cols=299 Identities=23% Similarity=0.347 Sum_probs=258.7
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
.+.++.+.|.+++..+|+++|+++.++.+||+|+.+.++++|++|.+.|+++||+|+++++|+++++..+||++.+|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh-------------cc---------------------------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL-------------SL--------------------------- 132 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-------------~~--------------------------- 132 (330)
+|+++.++.+.+.++++..+++++++++.+...+.... ..
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~il~TSGTTG~PK~v 192 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAGAEESGGRPAVAAPGRIVLLTSGTTGKPKGV 192 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhhhhcCCCCCCCCCCCcEEEECCCCCCCCCee
Confidence 99999999999999999999999998654332211100 00
Q ss_pred ---------------------Cc---------------------------------------------------------
Q 048729 133 ---------------------FP--------------------------------------------------------- 134 (330)
Q Consensus 133 ---------------------~~--------------------------------------------------------- 134 (330)
..
T Consensus 193 ~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 272 (516)
T PRK13383 193 PRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVP 272 (516)
T ss_pred eecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecH
Confidence 00
Q ss_pred -----------------------------------h-------------------------------HHHHhhccCCccc
Q 048729 135 -----------------------------------Q-------------------------------RARLKARQGVKTV 148 (330)
Q Consensus 135 -----------------------------------~-------------------------------~~~~~~~~G~~~~ 148 (330)
. ......++|.+++
T Consensus 273 ~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~ 352 (516)
T PRK13383 273 VVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVA 352 (516)
T ss_pred HHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCC
Confidence 0 0001224566666
Q ss_pred CceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEe
Q 048729 149 GLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIIS 228 (330)
Q Consensus 149 g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~ 228 (330)
|. +++|+|+ +|++++.+ +.|||+++|+.++.||++.+... +. +|||+|||++++|++|++++.||.+|++|+
T Consensus 353 ~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~~Y~~~~~~~---~~-~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~ 424 (516)
T PRK13383 353 GC-PVRILDR-NNRPVGPR--VTGRIFVGGELAGTRYTDGGGKA---VV-DGMTSTGDMGYLDNAGRLFIVGREDDMIIS 424 (516)
T ss_pred Cc-EEEEECC-CCCCCCCC--CceEEEEecCcccccccCCchhh---ee-cCceecceeEEEcCCccEEEeccccceEEE
Confidence 64 7888887 78888887 88999999999999999876422 23 899999999999999999999999999999
Q ss_pred CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccC
Q 048729 229 GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEE 308 (330)
Q Consensus 229 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~ 308 (330)
+|++|++.+||+.|.++|+|.++++++..+...++.+.++|++.++.. .+.+++.+.++++++++.+|..+.++++
T Consensus 425 ~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i~~v~~ 500 (516)
T PRK13383 425 GGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSG----VDAAQLRDYLKDRVSRFEQPRDINIVSS 500 (516)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC----CCHHHHHHHHHHhcccCCCCcEEEEeCC
Confidence 999999999999999999999999999988877888999998876654 5678999999999999999999999999
Q ss_pred CCCCCCCcccHHHHH
Q 048729 309 LPKTSTGKIQKYLLR 323 (330)
Q Consensus 309 lP~t~~GKv~r~~l~ 323 (330)
+|+|++||++|++|.
T Consensus 501 iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 501 IPRNPTGKVLRKELP 515 (516)
T ss_pred CCCCCCCcCcHHHhC
Confidence 999999999999873
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-43 Score=337.12 Aligned_cols=303 Identities=28% Similarity=0.481 Sum_probs=260.2
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
.++.++|.++++.+|+++|+++.++++||.||.++++++|++|.+ .|+++||+|+++++|+++++..++||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 589999999999999999999989999999999999999999997 4999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHH------------------------------------------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYL------------------------------------------------ 125 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~------------------------------------------------ 125 (330)
++++.++.+++.++++..+++++++++.+...
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQ 183 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCCcc
Confidence 99999999999999999999888763211000
Q ss_pred ----------------------------------------------------H---HHHh--------------c-c---
Q 048729 126 ----------------------------------------------------L---LEAL--------------S-L--- 132 (330)
Q Consensus 126 ----------------------------------------------------~---~~~~--------------~-~--- 132 (330)
. .... . .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (562)
T PRK12492 184 AVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIA 263 (562)
T ss_pred cccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEE
Confidence 0 0000 0 0
Q ss_pred -Cc-----------------------------------------------------------------------------
Q 048729 133 -FP----------------------------------------------------------------------------- 134 (330)
Q Consensus 133 -~~----------------------------------------------------------------------------- 134 (330)
.+
T Consensus 264 ~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~ 343 (562)
T PRK12492 264 PLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGT 343 (562)
T ss_pred ecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccc
Confidence 00
Q ss_pred -----hHHH-------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEec
Q 048729 135 -----QRAR-------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRG 178 (330)
Q Consensus 135 -----~~~~-------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~ 178 (330)
.... ...+.|.|++|. +++|+|+ ++.+++.+ +.|||+++|
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~-~v~ivd~-~~~~~~~g--~~Gel~v~g 419 (562)
T PRK12492 344 ALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGT-ALKVIDD-DGNELPLG--ERGELCIKG 419 (562)
T ss_pred cCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccceecCCC-EEEEECC-CCCCCCCC--CceEEEEeC
Confidence 0000 012455666664 7788887 78888887 789999999
Q ss_pred CcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecC
Q 048729 179 GCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPD 258 (330)
Q Consensus 179 ~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 258 (330)
+.++.||+++++.+.+.|..+|||+|||++++|++|.+++.||.||++|++|++|+|.+||+.+.++|.|.++++++.++
T Consensus 420 ~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 499 (562)
T PRK12492 420 PQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAIGVPD 499 (562)
T ss_pred CccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 99999999999999888876899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 259 MFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
...++.+.++++..... .+.+++.+.+.++++.+.+|..+.++++||+|++||++|++|++++
T Consensus 500 ~~~~~~~~~~v~~~~~~-----~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~~ 562 (562)
T PRK12492 500 ERSGEAVKLFVVARDPG-----LSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDIA 562 (562)
T ss_pred CCCCceEEEEEEeCCCC-----CCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhhC
Confidence 77778888888765432 4678999999999999999999999999999999999999999763
No 60
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-43 Score=337.12 Aligned_cols=307 Identities=27% Similarity=0.370 Sum_probs=252.4
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
.|+.++|..++ +|+++|+++.+.++||.||.+++.++|..|.+.|+ ++||+|+++++|++++++.++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 46888887654 79999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH------------------hc---------cCc------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA------------------LS---------LFP------------ 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------~~---------~~~------------ 134 (330)
|+++.++.+++.++++..++++++++......+... .. ...
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 160 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGALTPHREVDAMDPFMLIFTSG 160 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccCcCCCCCCCCCCeEEEEECCC
Confidence 999999999999999999999999976543322110 00 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 161 TTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~v 240 (540)
T PRK13388 161 TTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGA 240 (540)
T ss_pred CCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCC
Confidence
Q ss_pred --------------------------------------hHHHHhhccCC---cccCceeEEE------------------
Q 048729 135 --------------------------------------QRARLKARQGV---KTVGLAEVDV------------------ 155 (330)
Q Consensus 135 --------------------------------------~~~~~~~~~G~---~~~g~te~~i------------------ 155 (330)
....+....|. ..||.||...
T Consensus 241 t~~~~~p~~l~~l~~~~~~~~~~~~~l~~~~G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~vG~p~~ 320 (540)
T PRK13388 241 TYFNYVGKPLAYILATPERPDDADNPLRVAFGNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREPGTPPGSIGRGAP 320 (540)
T ss_pred eEEEehHHHHHHHHhCCCCccccccceEEEECCCCCHHHHHHHHHHhCCceecccccccccceeecCCCCCCCCCCCCCC
Confidence 00000001122 2366666421
Q ss_pred ----eCCC------------CCcccCCCCceecEEEEe-cCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEE
Q 048729 156 ----VNPE------------TGESVKRDGVSLGEVVLR-GGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEI 218 (330)
Q Consensus 156 ----~d~~------------~g~~~~~~~~~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~ 218 (330)
++++ +|+.+..++ ..|||+++ |++++.||+++++.+.+.|. +|||+|||++++|++|.+++
T Consensus 321 g~~i~~~~~~~~~~~~~~d~~g~~~~~~~-~~GEl~v~~g~~~~~gY~~~~~~t~~~~~-~g~~~TGD~~~~~~dg~l~i 398 (540)
T PRK13388 321 GVAIYNPETLTECAVARFDAHGALLNADE-AIGELVNTAGAGFFEGYYNNPEATAERMR-HGMYWSGDLAYRDADGWIYF 398 (540)
T ss_pred CcEEEcCCCCccccceeccCccccccCCC-cceEEEEecCCcccccccCChHHHHHHhh-cCceeccceEEEcCCCcEEE
Confidence 1110 222222211 57999998 99999999999999888886 89999999999999999999
Q ss_pred EecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhc--CCC
Q 048729 219 KDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRAR--LPR 296 (330)
Q Consensus 219 ~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~--l~~ 296 (330)
.||.||+||++|++|+|.+||+.+.++|+|.+++|++.+++..++.+++++++.++.. .+.+++.++++.+ |++
T Consensus 399 ~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~----~~~~~l~~~l~~~~~l~~ 474 (540)
T PRK13388 399 AGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGAT----FDPDAFAAFLAAQPDLGT 474 (540)
T ss_pred eccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCc----CCHHHHHHHHHhhccCCc
Confidence 9999999999999999999999999999999999999998877888888888877654 5678899999764 999
Q ss_pred CCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 297 YMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 297 ~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+++|..++++++||+|++||++|++|+++..++
T Consensus 475 ~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 475 KAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred ccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 999999999999999999999999999987554
No 61
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-43 Score=339.16 Aligned_cols=313 Identities=26% Similarity=0.298 Sum_probs=254.5
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
.+....|+.++|.+.++.+|+++|+++.++++||+||...++++|.+|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 32 ~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 32 TPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 44667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh---------------------------------cc----
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL---------------------------------SL---- 132 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~---------------------------------~~---- 132 (330)
++++++++.++.+.+.++++..++++++++......+.... ..
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPA 191 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccCCC
Confidence 99999999999999999999999999998865443321100 00
Q ss_pred ----Cc--------------------------------------------------------------------------
Q 048729 133 ----FP-------------------------------------------------------------------------- 134 (330)
Q Consensus 133 ----~~-------------------------------------------------------------------------- 134 (330)
..
T Consensus 192 ~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~ 271 (600)
T PRK08279 192 SRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL 271 (600)
T ss_pred cccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE
Confidence 00
Q ss_pred --------------------------------------------------------hHHHHhhcc----CCcccCceeEE
Q 048729 135 --------------------------------------------------------QRARLKARQ----GVKTVGLAEVD 154 (330)
Q Consensus 135 --------------------------------------------------------~~~~~~~~~----G~~~~g~te~~ 154 (330)
....+.... -.+.||.||..
T Consensus 272 ~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~ 351 (600)
T PRK08279 272 RRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLMIGNGLRPDIWDEFQQRFGIPRILEFYAASEGN 351 (600)
T ss_pred cCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEEecCCCCHHHHHHHHHHhCcceeeeeecccccc
Confidence 000001111 23458888743
Q ss_pred Ee---------------------------CCCCCc----------ccCCCCceecEEE--EecCcccccccCCchhhhcc
Q 048729 155 VV---------------------------NPETGE----------SVKRDGVSLGEVV--LRGGCVTVGYFKDKEATRRC 195 (330)
Q Consensus 155 i~---------------------------d~~~g~----------~~~~~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~ 195 (330)
+. +..+|. +++.+ +.||++ +.++.++.|| ++++.+.+.
T Consensus 352 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~ 428 (600)
T PRK08279 352 VGFINVFNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPG--EVGLLIGRITDRGPFDGY-TDPEASEKK 428 (600)
T ss_pred eeecccCCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCC--CceeEEEEecCccccccc-CCchhhHHH
Confidence 21 000111 23344 779998 6789999999 888777655
Q ss_pred c------cCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCC-CceeEEE
Q 048729 196 I------SDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFW-GEIPCAF 268 (330)
Q Consensus 196 ~------~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~-~~~~~~~ 268 (330)
+ ..++||+|||+|++|++|.+++.||.||+||++|++|+|.+||+.+.++|+|.+++|++.+.+.. +....++
T Consensus 429 ~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~ 508 (600)
T PRK08279 429 ILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAA 508 (600)
T ss_pred HhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeE
Confidence 4 22589999999999999999999999999999999999999999999999999999999876543 3345555
Q ss_pred EEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 269 VSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 269 v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
++..++.. .+.+++.+.++++|++|++|..+++++++|+|++||++|++|++++.+.
T Consensus 509 vv~~~~~~----~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 509 IVLADGAE----FDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred EEecCCcc----CCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 66554433 6779999999999999999999999999999999999999999887543
No 62
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-44 Score=403.42 Aligned_cols=304 Identities=22% Similarity=0.245 Sum_probs=267.7
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
..++.++|.++++.+|+++|+++.++++||+||.+.++++|++|.+.|+++||+|++++++++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH-----------------Hhcc------Cc----------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE-----------------ALSL------FP---------------- 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-----------------~~~~------~~---------------- 134 (330)
|+++.++.+++.++++..+++++++++.....+.. .... .+
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~P 2161 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRDAEWADYPDTAPAVQLAGENLAYVIYTSGSTGLP 2161 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccchhhhhccCccCCCCCCCCCCeEEEEeCccCCCCC
Confidence 99999999999999999999999998654332110 0000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 2162 KgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~ 2241 (5163)
T PRK12316 2162 KGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILD 2241 (5163)
T ss_pred CEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEE
Confidence
Q ss_pred --------------------------------------------------------h-----------HHH----Hhhcc
Q 048729 135 --------------------------------------------------------Q-----------RAR----LKARQ 143 (330)
Q Consensus 135 --------------------------------------------------------~-----------~~~----~~~~~ 143 (330)
+ ... ...++
T Consensus 2242 ~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~i 2321 (5163)
T PRK12316 2242 FPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPI 2321 (5163)
T ss_pred cChHHHHHHHhhhhcccCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCc
Confidence 0 000 01356
Q ss_pred CCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC-------CCeEEeCceEEEecCceE
Q 048729 144 GVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD-------NGWFYTGDIGVMHADGYV 216 (330)
Q Consensus 144 G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD~~~~~~~G~l 216 (330)
|.|+.|. ++.|+|+ +++++|.+ +.|||+|+|+++++||+++|+.+.+.|.. ++||+|||+|++++||.+
T Consensus 2322 G~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l 2397 (5163)
T PRK12316 2322 GRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVV 2397 (5163)
T ss_pred ccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcE
Confidence 7777775 8888887 78899988 89999999999999999999999988842 359999999999999999
Q ss_pred EEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCC
Q 048729 217 EIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPR 296 (330)
Q Consensus 217 ~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~ 296 (330)
+|+||+||+||++|+||+|.+||+.|.++|+|.+++|++..+. .+++++++++...+.. ...+++++.++++|+.
T Consensus 2398 ~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~----~~~~~l~~~l~~~Lp~ 2472 (5163)
T PRK12316 2398 EYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAE----DLLAELRAWLAARLPA 2472 (5163)
T ss_pred EEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCCCc----cCHHHHHHHHHhhCch
Confidence 9999999999999999999999999999999999999998765 6778999999887654 6789999999999999
Q ss_pred CCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 297 YMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 297 ~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
|++|..++++++||+|+|||+||++|.+..
T Consensus 2473 ~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2473 YMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred hcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 999999999999999999999999997643
No 63
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.9e-44 Score=344.76 Aligned_cols=314 Identities=22% Similarity=0.294 Sum_probs=240.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEe----C-----CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVY----N-----NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~----~-----~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
....|+.++|.+.++.+|+++|+.. . .+.+||+||.++++++|++|.+.|+++||+|+++++|+++|++.+
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3446899999999999999999942 1 146999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH---------------------------------
Q 048729 83 FGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA--------------------------------- 129 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--------------------------------- 129 (330)
+||+++|++++|+++.++++++.++++..++++++++......+...
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 200 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVT 200 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEE
Confidence 99999999999999999999999999999999999876433221100
Q ss_pred -------h----cc----Cc------------------------------------------------------------
Q 048729 130 -------L----SL----FP------------------------------------------------------------ 134 (330)
Q Consensus 130 -------~----~~----~~------------------------------------------------------------ 134 (330)
. .. .+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~ 280 (651)
T PLN02736 201 YSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQ 280 (651)
T ss_pred HHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHH
Confidence 0 00 00
Q ss_pred -------------------------------------------hHH----------------------------------
Q 048729 135 -------------------------------------------QRA---------------------------------- 137 (330)
Q Consensus 135 -------------------------------------------~~~---------------------------------- 137 (330)
...
T Consensus 281 ~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (651)
T PLN02736 281 IVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSP 360 (651)
T ss_pred HHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 000
Q ss_pred --H----------H----------------------hhccCC---cccCcee--------------------------EE
Q 048729 138 --R----------L----------------------KARQGV---KTVGLAE--------------------------VD 154 (330)
Q Consensus 138 --~----------~----------------------~~~~G~---~~~g~te--------------------------~~ 154 (330)
. . ....|. ..||.|| ++
T Consensus 361 ~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~ 440 (651)
T PLN02736 361 MWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEGDNLSGHVGSPNPACEVK 440 (651)
T ss_pred hHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCCCCCCCccCCccCceEEE
Confidence 0 0 000111 1245554 44
Q ss_pred EeCCCCCcccCCC-CceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEe-CCee
Q 048729 155 VVNPETGESVKRD-GVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIIS-GGEN 232 (330)
Q Consensus 155 i~d~~~g~~~~~~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~-~G~~ 232 (330)
|+|.+++.....+ ....|||+++|++++.|||++|+.+.+.|..+|||+|||+|++|+||+++|+||.+|+||+ +|++
T Consensus 441 i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~ 520 (651)
T PLN02736 441 LVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEY 520 (651)
T ss_pred EEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcE
Confidence 4442111111000 0035999999999999999999999998877999999999999999999999999999996 7999
Q ss_pred cCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCccc----CCCCCHHHHHHHH------------------
Q 048729 233 ICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL----TKKPTEKEIIEYC------------------ 290 (330)
Q Consensus 233 v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~l~~~l------------------ 290 (330)
|+|.+||+.|.+||.|.+++|++.. .++.++|+|++..+.-. ....+..++.+.+
T Consensus 521 V~p~eIE~~l~~~p~V~~a~V~g~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 597 (651)
T PLN02736 521 IAPEKIENVYAKCKFVAQCFVYGDS---LNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGR 597 (651)
T ss_pred echHHHHHHHhcCCCeeEEEEEecC---CCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999832 45689999998653100 0001111222222
Q ss_pred HhcCCCCCCCceEEEccCCC------CCCCCcccHHHHHHHhhh
Q 048729 291 RARLPRYMVPRKVVFSEELP------KTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 291 ~~~l~~~~~p~~~~~v~~lP------~t~~GKv~r~~l~~~~~~ 328 (330)
+.+|+.+++|.+|.++++.| +|++||++|++|++.|++
T Consensus 598 ~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~ 641 (651)
T PLN02736 598 EAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAK 641 (651)
T ss_pred hcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHH
Confidence 13699999999999999886 699999999999998864
No 64
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=5e-43 Score=334.56 Aligned_cols=303 Identities=28% Similarity=0.405 Sum_probs=259.0
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
.++.++|.+.++.+|+++|+++.++++||+||.+.+.++|++|. +.|+++||+|+++++|++++++.++||+++|++++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVV 104 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEe
Confidence 58899999999999999999999999999999999999999997 68999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------------------------------------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA-------------------------------------------- 129 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------------------------------------------- 129 (330)
|+++.++.+++.+++...+++++++++.+...+...
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRING 184 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCCc
Confidence 999999999999999999999988754221110000
Q ss_pred ------------hcc----------C---------------------------------------------------c--
Q 048729 130 ------------LSL----------F---------------------------------------------------P-- 134 (330)
Q Consensus 130 ------------~~~----------~---------------------------------------------------~-- 134 (330)
... . +
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (560)
T PRK08751 185 AIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLY 264 (560)
T ss_pred cccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChH
Confidence 000 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 265 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~ 344 (560)
T PRK08751 265 HIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRS 344 (560)
T ss_pred HHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHH
Confidence
Q ss_pred hHH-------------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccc
Q 048729 135 QRA-------------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 183 (330)
Q Consensus 135 ~~~-------------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~ 183 (330)
... ....++|.++.|. ++.++|+ +|++++.+ +.|||+++|+.++.
T Consensus 345 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v~~~~~~~ 420 (560)
T PRK08751 345 VAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPST-DACIKDD-AGTVLAIG--EIGELCIKGPQVMK 420 (560)
T ss_pred HHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCccch
Confidence 000 0012334555554 6677776 78888887 78999999999999
Q ss_pred cccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCc
Q 048729 184 GYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGE 263 (330)
Q Consensus 184 gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 263 (330)
||+++++.+.+.+..+|||+|||++++|++|.+++.||.||++|++|++|+|.+||+.+..+|+|.+++|++.++...++
T Consensus 421 gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge 500 (560)
T PRK08751 421 GYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGE 500 (560)
T ss_pred hhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCc
Confidence 99999999988887789999999999999999999999999999999999999999999999999999999998877777
Q ss_pred eeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 264 IPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 264 ~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
.+.++++... .. .+.+++.+.++++++++.+|..++++++||+|++||++|++|++..
T Consensus 501 ~~~~~v~~~~-~~----~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 501 IVKVVIVKKD-PA----LTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred eEEEEEEcCC-CC----CCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 7777776543 22 5678999999999999999999999999999999999999998864
No 65
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-43 Score=335.60 Aligned_cols=315 Identities=30% Similarity=0.485 Sum_probs=256.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeC---CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYN---NTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~---~~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
..+.|+.++|.+.+..+|+++|+++. ++.+||+||.+++.++|++|.+ .|+++||+|+++++|++++++.++||++
T Consensus 7 ~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 7 DVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 34579999999999999999999874 3789999999999999999985 8999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc------------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS------------------------------------ 131 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~------------------------------------ 131 (330)
+|++++++++.++.+.+.++++..+++++++++.....+.....
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL 166 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh
Confidence 99999999999999999999999999999987654332211000
Q ss_pred ----------cC-----c--------------------------------------------------------------
Q 048729 132 ----------LF-----P-------------------------------------------------------------- 134 (330)
Q Consensus 132 ----------~~-----~-------------------------------------------------------------- 134 (330)
.. .
T Consensus 167 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l 246 (576)
T PRK05620 167 DGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLAAF 246 (576)
T ss_pred hcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHHHH
Confidence 00 0
Q ss_pred -------------------------------------------------------------------hHHHHhhccCC--
Q 048729 135 -------------------------------------------------------------------QRARLKARQGV-- 145 (330)
Q Consensus 135 -------------------------------------------------------------------~~~~~~~~~G~-- 145 (330)
....+....|.
T Consensus 247 ~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~ 326 (576)
T PRK05620 247 MSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYGVDV 326 (576)
T ss_pred hcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhCCce
Confidence 00000001111
Q ss_pred -cccCceeE----------------------------------EEeCCCCCcccCCCCceecEEEEecCcccccccCCch
Q 048729 146 -KTVGLAEV----------------------------------DVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKE 190 (330)
Q Consensus 146 -~~~g~te~----------------------------------~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 190 (330)
..||.||. +++|+ |..++...+..|||+++|++++.||+++++
T Consensus 327 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~ 404 (576)
T PRK05620 327 VHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTASYYHSPT 404 (576)
T ss_pred eeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--CccccCCCCCceEEEEEcCcccccccCCcc
Confidence 22455543 33332 333332222679999999999999999987
Q ss_pred hh----------------hccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEE
Q 048729 191 AT----------------RRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVV 254 (330)
Q Consensus 191 ~~----------------~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~ 254 (330)
.+ ...+..+|||+|||+++++++|.+++.||.+|++|++|.+|++.+||+.|.+||.|.+++|+
T Consensus 405 ~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~~vv 484 (576)
T PRK05620 405 EEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVECAVI 484 (576)
T ss_pred ccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceEEEEE
Confidence 76 22244478999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 255 ARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+.+++..++.+++++++.++.... ....+++++.++++|+++.+|+.|++++++|+|++||++|++|++++++.
T Consensus 485 ~~~~~~~g~~~~a~v~~~~~~~~~-~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 485 GYPDDKWGERPLAVTVLAPGIEPT-RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred eccCCCcCceeEEEEEecCCCCcc-cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcC
Confidence 999888788888888887764321 13578999999999999999999999999999999999999999998753
No 66
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-43 Score=339.45 Aligned_cols=308 Identities=23% Similarity=0.294 Sum_probs=248.3
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeC---------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~---------~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la 84 (330)
..++.++|.+.++.+|+++|+++. .+.+||+||.+.++++|++|.+. +++||+|+++++|++++++++||
T Consensus 20 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA 98 (631)
T PRK07769 20 NTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFG 98 (631)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHH
Confidence 358999999999999999999863 25799999999999999999976 89999999999999999999999
Q ss_pred hhhcCcEEeec-CCCCC--HHHHHHHHHhcCCcEEEEcccchHHHHHHh----------------------cc------C
Q 048729 85 VPMSGAILNNI-NTRLD--AHTLSVLLQHSESKLVFVDHLHTYLLLEAL----------------------SL------F 133 (330)
Q Consensus 85 ~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~----------------------~~------~ 133 (330)
|+++|++++|+ ++..+ .+++.++++..+++++++++.....+.... .. .
T Consensus 99 ~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (631)
T PRK07769 99 ALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPDEVGATWVPPEAN 178 (631)
T ss_pred HHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccccccccccCCCCCC
Confidence 99999999999 44443 578999999999999999865433221100 00 0
Q ss_pred c--------------------------------------------------------------------------h-HH-
Q 048729 134 P--------------------------------------------------------------------------Q-RA- 137 (330)
Q Consensus 134 ~--------------------------------------------------------------------------~-~~- 137 (330)
. . ..
T Consensus 179 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~ 258 (631)
T PRK07769 179 EDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFV 258 (631)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHH
Confidence 0 0 00
Q ss_pred --------------------------------H---Hh----------------------------------hccC----
Q 048729 138 --------------------------------R---LK----------------------------------ARQG---- 144 (330)
Q Consensus 138 --------------------------------~---~~----------------------------------~~~G---- 144 (330)
. .. ...|
T Consensus 259 ~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~ 338 (631)
T PRK07769 259 RRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPT 338 (631)
T ss_pred hCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChh
Confidence 0 00 0001
Q ss_pred --CcccCceeEE-----------------------------------------------------EeCCCCCcccCCCCc
Q 048729 145 --VKTVGLAEVD-----------------------------------------------------VVNPETGESVKRDGV 169 (330)
Q Consensus 145 --~~~~g~te~~-----------------------------------------------------i~d~~~g~~~~~~~~ 169 (330)
.+.||.||+. |+|+++|++++.+
T Consensus 339 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~g-- 416 (631)
T PRK07769 339 AIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDG-- 416 (631)
T ss_pred hcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCC--
Confidence 1347777642 3343356677777
Q ss_pred eecEEEEecCcccccccCCchhhhccccC-----------------CCeEEeCceEEEecCceEEEEecCCCeEEeCCee
Q 048729 170 SLGEVVLRGGCVTVGYFKDKEATRRCISD-----------------NGWFYTGDIGVMHADGYVEIKDRSKDVIISGGEN 232 (330)
Q Consensus 170 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------------~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~ 232 (330)
+.|||+++|++++.|||++++.+.+.|.. +|||+|||+|+++ +|+++|+||.||+||++|++
T Consensus 417 e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~ 495 (631)
T PRK07769 417 QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRN 495 (631)
T ss_pred CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCee
Confidence 88999999999999999999988877742 4899999999996 99999999999999999999
Q ss_pred cCHHHHHHHHhc-CcCcce--EEEEeecC-------------------CCCCceeEEEEEecCCcccCCCCCHHHHHHHH
Q 048729 233 ICSAEVESVLYS-ITAVNE--AAVVARPD-------------------MFWGEIPCAFVSLKRDLELTKKPTEKEIIEYC 290 (330)
Q Consensus 233 v~~~~iE~~l~~-~~~v~~--~~v~~~~~-------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l 290 (330)
|+|.+||++|.+ ||.|.+ ++|++.++ +..++++++++++.++... .+.++|.+++
T Consensus 496 V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~---~~~~~l~~~~ 572 (631)
T PRK07769 496 HYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHK---LDPQPIADDI 572 (631)
T ss_pred eCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCcccc---ccHHHHHHHH
Confidence 999999999996 899998 89998887 4567889999998876321 5678999999
Q ss_pred HhcCCC-CC-CCceEEEcc--CCCCCCCCcccHHHHHHHhhh
Q 048729 291 RARLPR-YM-VPRKVVFSE--ELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 291 ~~~l~~-~~-~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++++.. +. .|+.+.+++ +||+|++||++|++|++.+.+
T Consensus 573 ~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 573 RAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred HHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHc
Confidence 999985 56 588888887 799999999999999998754
No 67
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-43 Score=331.93 Aligned_cols=307 Identities=32% Similarity=0.527 Sum_probs=261.1
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeC--C--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYN--N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~--~--~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
.+.++.++|...+..+|+.+++.+. + +.+||.||.+.++++|++|.+.|+++||+|+++++|+++++.+++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 3468999999999999999998752 2 68999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh------------------------------------c-
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL------------------------------------S- 131 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------------------------------------~- 131 (330)
|++++|+++.++++++..+++..+++++++++.+...+.... .
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQDGD 167 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccCCC
Confidence 999999999999999999999999999887654322111000 0
Q ss_pred ----cC-c------------------------------------------------------------------------
Q 048729 132 ----LF-P------------------------------------------------------------------------ 134 (330)
Q Consensus 132 ----~~-~------------------------------------------------------------------------ 134 (330)
.. .
T Consensus 168 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~ 247 (539)
T PRK07008 168 YDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKL 247 (539)
T ss_pred cCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceE
Confidence 00 0
Q ss_pred -------------------------------------------------------------hHH----------------
Q 048729 135 -------------------------------------------------------------QRA---------------- 137 (330)
Q Consensus 135 -------------------------------------------------------------~~~---------------- 137 (330)
...
T Consensus 248 ~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~ 327 (539)
T PRK07008 248 VLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGM 327 (539)
T ss_pred EEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhCCceeccccc
Confidence 000
Q ss_pred -------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhh
Q 048729 138 -------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEAT 192 (330)
Q Consensus 138 -------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 192 (330)
....+.|.|++|. +++|+|+ ++.+++.++.+.|||+++|++++.||++++..
T Consensus 328 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~- 404 (539)
T PRK07008 328 TEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDRYFRGDAS- 404 (539)
T ss_pred ccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEEEeCCccchhhcCChhh-
Confidence 0013456777775 8888887 78878765435799999999999999998843
Q ss_pred hccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEec
Q 048729 193 RRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLK 272 (330)
Q Consensus 193 ~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 272 (330)
.+. +|||+|||++++|+||.+++.||.||++|.+|.+|+|.+||+.+..+|.|.++++++.+++..++.++++|+..
T Consensus 405 --~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~ 481 (539)
T PRK07008 405 --PLV-DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKR 481 (539)
T ss_pred --hhc-CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeC
Confidence 333 78999999999999999999999999999999999999999999999999999999999887778888888877
Q ss_pred CCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 273 RDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 273 ~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
++.. .+.+++.+++++++++|..|..+++++++|+|++||++|++|++++.+.
T Consensus 482 ~~~~----~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 482 PGAE----VTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred CCCc----cCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 6544 5778999999999999999999999999999999999999999998764
No 68
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=5.1e-43 Score=331.18 Aligned_cols=301 Identities=28% Similarity=0.409 Sum_probs=260.9
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 95 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l 95 (330)
++.++|...++.+|+++|+.+.++++||+||.+.+.+++++|.+.|+++||+|+++++|+.+++++++||+.+|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-----------------------------------c-----C--
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS-----------------------------------L-----F-- 133 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-----------------------------------~-----~-- 133 (330)
++.++.+.+..+++..+++++++++.....+..... . .
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGDADPPHPVID 160 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccccccccCCCCc
Confidence 999999999999999999999987654332211000 0 0
Q ss_pred ---c----------------------------------------------------------------------------
Q 048729 134 ---P---------------------------------------------------------------------------- 134 (330)
Q Consensus 134 ---~---------------------------------------------------------------------------- 134 (330)
.
T Consensus 161 ~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 240 (515)
T TIGR03098 161 SDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHDYLLPRD 240 (515)
T ss_pred CCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcCCCCHHH
Confidence 0
Q ss_pred -------------------------------------------------hH-----------------------------
Q 048729 135 -------------------------------------------------QR----------------------------- 136 (330)
Q Consensus 135 -------------------------------------------------~~----------------------------- 136 (330)
..
T Consensus 241 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 320 (515)
T TIGR03098 241 VLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPP 320 (515)
T ss_pred HHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEeccc
Confidence 00
Q ss_pred ---HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC-----------CCeE
Q 048729 137 ---ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD-----------NGWF 202 (330)
Q Consensus 137 ---~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------~g~~ 202 (330)
.....++|.+++|+ +++++++ ++++++.+ +.|||+++|+.++.||+++++.+...|.. ++||
T Consensus 321 ~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (515)
T TIGR03098 321 EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAV 396 (515)
T ss_pred ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccce
Confidence 00112456666675 7788887 78888877 88999999999999999999877665532 3489
Q ss_pred EeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCC
Q 048729 203 YTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPT 282 (330)
Q Consensus 203 ~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 282 (330)
+|||+|++|++|.+++.||.+|++|++|.+|+|.+||+.+.++|.|.+++|++..++..+++++++++...+.. .+
T Consensus 397 ~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~----~~ 472 (515)
T TIGR03098 397 WSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEE----LD 472 (515)
T ss_pred eccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCC----CC
Confidence 99999999999999999999999999999999999999999999999999999998888889988887655544 57
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHH
Q 048729 283 EKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLRE 324 (330)
Q Consensus 283 ~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 324 (330)
.+++.+.++++|+++++|..++++++||+|++||++|++|++
T Consensus 473 ~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 473 RAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred HHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 789999999999999999999999999999999999999975
No 69
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-42 Score=330.14 Aligned_cols=308 Identities=31% Similarity=0.489 Sum_probs=259.6
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEe--C--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVY--N--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~--~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
.++++.++|...++.+||++++++ . .+++||+||.+.++++|++|.+.|+++||+|+++++|+++++..++||+.+
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~ 87 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGI 87 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhc
Confidence 367999999999999999999985 2 378999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh--------------------------------------
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL-------------------------------------- 130 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-------------------------------------- 130 (330)
|++++|+++.++.+.+.++++..++++++++..+...+.+..
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (542)
T PRK06018 88 GAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEADG 167 (542)
T ss_pred CeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCCc
Confidence 999999999999999999999999999987643221111000
Q ss_pred ----ccCc------------------------------------------------------------------------
Q 048729 131 ----SLFP------------------------------------------------------------------------ 134 (330)
Q Consensus 131 ----~~~~------------------------------------------------------------------------ 134 (330)
....
T Consensus 168 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~ 247 (542)
T PRK06018 168 DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTK 247 (542)
T ss_pred ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCce
Confidence 0000
Q ss_pred --------------------------------------------------------------hHHHH-------------
Q 048729 135 --------------------------------------------------------------QRARL------------- 139 (330)
Q Consensus 135 --------------------------------------------------------------~~~~~------------- 139 (330)
....+
T Consensus 248 ~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~ 327 (542)
T PRK06018 248 LVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFEDMGVEVRHAWGM 327 (542)
T ss_pred EEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHhCCCeEeeecc
Confidence 00000
Q ss_pred ---------------------------hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhh
Q 048729 140 ---------------------------KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEAT 192 (330)
Q Consensus 140 ---------------------------~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~ 192 (330)
..+.|.|.+|. +++++|+ +++.++.++...|||+++|++++.||++..
T Consensus 328 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~--- 402 (542)
T PRK06018 328 TEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRLKVRGPAVAAAYYRVD--- 402 (542)
T ss_pred cccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEEEEecCCcchhhhcCc---
Confidence 01235555564 6777777 777777654367999999999999999832
Q ss_pred hccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEec
Q 048729 193 RRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLK 272 (330)
Q Consensus 193 ~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 272 (330)
...+..+|||+|||+++++++|.+++.||.+|++|++|++|++.+||+.+.++|+|.+++|++..++..++.+.+++++.
T Consensus 403 ~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 482 (542)
T PRK06018 403 GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLK 482 (542)
T ss_pred ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeC
Confidence 23344589999999999999999999999999999999999999999999999999999999999887788888888887
Q ss_pred CCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 273 RDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 273 ~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
++.. .+.+++.+.++.+++.+.+|..+.++++||+|++||++|++|++.+.+.
T Consensus 483 ~~~~----~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 483 PGET----ATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred CCCC----CCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 7654 6778999999999999999999999999999999999999999998763
No 70
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-43 Score=367.73 Aligned_cols=305 Identities=19% Similarity=0.245 Sum_probs=259.5
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
.+..++.++|.++++.+|+++|+++.++++||+||.+.+.++|++|.+.|+++||+|+++++++++++++++||+++|++
T Consensus 455 ~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~ 534 (1296)
T PRK10252 455 IPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAA 534 (1296)
T ss_pred CCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------------hc--c----Cc-----------------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA--------------LS--L----FP----------------- 134 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--------------~~--~----~~----------------- 134 (330)
++|+++.++.+++.++++..++++++++......+... .. . .+
T Consensus 535 ~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PK 614 (1296)
T PRK10252 535 WLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYNAPLAPQGAAPLQLSQPHHTAYIIFTSGSTGRPK 614 (1296)
T ss_pred EEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecccccccccCCCCCCCCCCCeEEEEECCCCCCCCC
Confidence 99999999999999999999999999876543322110 00 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 615 gV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~ 694 (1296)
T PRK10252 615 GVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTH 694 (1296)
T ss_pred EEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEE
Confidence
Q ss_pred --------------------------------------hHH-------------------------------------HH
Q 048729 135 --------------------------------------QRA-------------------------------------RL 139 (330)
Q Consensus 135 --------------------------------------~~~-------------------------------------~~ 139 (330)
... ..
T Consensus 695 ~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~ 774 (1296)
T PRK10252 695 FVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGS 774 (1296)
T ss_pred eCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCC
Confidence 000 00
Q ss_pred hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC------CCeEEeCceEEEecC
Q 048729 140 KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD------NGWFYTGDIGVMHAD 213 (330)
Q Consensus 140 ~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------~g~~~TGD~~~~~~~ 213 (330)
..++|.|++|. ++.|+|+ ++++++.+ +.|||+++|+.++.||+++|+.+.+.|.. ++||+|||+|+++++
T Consensus 775 ~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~ 850 (1296)
T PRK10252 775 SVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDD 850 (1296)
T ss_pred CCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCC
Confidence 12345566664 6677776 78888888 88999999999999999999998888753 349999999999999
Q ss_pred ceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeec----C--CCCCceeEEEEEecCCcccCCCCCHHHHH
Q 048729 214 GYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARP----D--MFWGEIPCAFVSLKRDLELTKKPTEKEII 287 (330)
Q Consensus 214 G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~----~--~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 287 (330)
|.++++||.|++||++|++|++.+||++|.++|+|.+++|+... + .....+++++++...+.. .+.++++
T Consensus 851 G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~----~~~~~l~ 926 (1296)
T PRK10252 851 GAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLP----LDTSALQ 926 (1296)
T ss_pred CcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCC----CCHHHHH
Confidence 99999999999999999999999999999999999999887652 1 111237888888776643 5778999
Q ss_pred HHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHH
Q 048729 288 EYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLRE 324 (330)
Q Consensus 288 ~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 324 (330)
+.++++|+.|++|..++.+++||+|++||+||++|.+
T Consensus 927 ~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~ 963 (1296)
T PRK10252 927 AQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPL 963 (1296)
T ss_pred HHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCC
Confidence 9999999999999999999999999999999999865
No 71
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=5.4e-43 Score=332.48 Aligned_cols=305 Identities=27% Similarity=0.425 Sum_probs=258.1
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
...++.++|.+.++ |+++|+++.++++||+||.+.+.++|++|.+.|+++||+|+++++|++++++.++||+++|+++
T Consensus 23 ~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 23 QDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred cCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 35689999988887 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccc--------hHHHHH------------------------Hhc-c-----Cc
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLH--------TYLLLE------------------------ALS-L-----FP 134 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~--------~~~~~~------------------------~~~-~-----~~ 134 (330)
+++.......++..+++..++++++++... ...+.. ... . ..
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAEDFTATPSP 180 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCcccccccCCCC
Confidence 777777777788889999999998876431 000000 000 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~ 260 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPS 260 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCC
Confidence
Q ss_pred -------------------------------------------------------hHH----------------------
Q 048729 135 -------------------------------------------------------QRA---------------------- 137 (330)
Q Consensus 135 -------------------------------------------------------~~~---------------------- 137 (330)
...
T Consensus 261 ~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~ 340 (536)
T PRK10946 261 ATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVN 340 (536)
T ss_pred HHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeeccccccee
Confidence 000
Q ss_pred ---------HHhhccCCcc-cCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCce
Q 048729 138 ---------RLKARQGVKT-VGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDI 207 (330)
Q Consensus 138 ---------~~~~~~G~~~-~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~ 207 (330)
....+.|.|+ ++ ++++++|+ +|++++.+ +.|||+++|+.++.||+++++.+...|..+|||+|||+
T Consensus 341 ~~~~~~~~~~~~~~~G~p~~~~-~~v~i~d~-~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl 416 (536)
T PRK10946 341 YTRLDDSDERIFTTQGRPMSPD-DEVWVADA-DGNPLPQG--EVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDL 416 (536)
T ss_pred eecCCCccccccccCCcccCCC-ceEEEECC-CCCCCCCC--CccEEEEecCccchhhcCCcccchhhcccCCceecCce
Confidence 0012334444 33 36667776 78888887 88999999999999999999999888877899999999
Q ss_pred EEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHH
Q 048729 208 GVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEII 287 (330)
Q Consensus 208 ~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 287 (330)
+++|++|++++.||.+|++|++|++|+|.+||+.|.++|+|.++++++.+++..++.+++++++.++ .+..++.
T Consensus 417 ~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~------~~~~~l~ 490 (536)
T PRK10946 417 VSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP------LKAVQLR 490 (536)
T ss_pred EEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC------CCHHHHH
Confidence 9999999999999999999999999999999999999999999999999988778889999887664 4578999
Q ss_pred HHHHhc-CCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 288 EYCRAR-LPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 288 ~~l~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+.+++. +++|++|..+.+++++|+|++||++|++|++++.++
T Consensus 491 ~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 491 RFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred HHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhh
Confidence 999886 999999999999999999999999999999998764
No 72
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2e-43 Score=368.23 Aligned_cols=308 Identities=22% Similarity=0.277 Sum_probs=252.3
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEe---------CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVY---------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~---------~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la 84 (330)
..++.++|.++++.+|+++|+++ .++++||+||.+.++++|++|.+.|+++||+|++++++++++++++||
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 45799999999999999999985 357899999999999999999999999999999999999999999999
Q ss_pred hhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccc---hHHHH----------------------------------
Q 048729 85 VPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLH---TYLLL---------------------------------- 127 (330)
Q Consensus 85 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~---~~~~~---------------------------------- 127 (330)
|+++|++++|+++.++++++.++++..+++++++.... ...+.
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGET 394 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccccccc
Confidence 99999999999999999999999999999998875321 00000
Q ss_pred HH----------h-------ccCc--------------------------------------------------------
Q 048729 128 EA----------L-------SLFP-------------------------------------------------------- 134 (330)
Q Consensus 128 ~~----------~-------~~~~-------------------------------------------------------- 134 (330)
.. . ....
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~i 474 (1389)
T TIGR03443 395 DVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRDM 474 (1389)
T ss_pred cccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHHH
Confidence 00 0 0000
Q ss_pred ----------------------------------------------------------------------hHHH------
Q 048729 135 ----------------------------------------------------------------------QRAR------ 138 (330)
Q Consensus 135 ----------------------------------------------------------------------~~~~------ 138 (330)
....
T Consensus 475 ~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 554 (1389)
T TIGR03443 475 FTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPSLHHAFFVGDILTKRDCLRLQTLAE 554 (1389)
T ss_pred HHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCCccEEEEecccCCHHHHHHHHHhCC
Confidence 0000
Q ss_pred ------------------------------------HhhccCCcccCceeEEEeCCC-CCcccCCCCceecEEEEecCcc
Q 048729 139 ------------------------------------LKARQGVKTVGLAEVDVVNPE-TGESVKRDGVSLGEVVLRGGCV 181 (330)
Q Consensus 139 ------------------------------------~~~~~G~~~~g~te~~i~d~~-~g~~~~~~~~~~Gel~v~~~~~ 181 (330)
...++|.|++|. ++.|+|+. .+++++.+ +.|||+|+|+++
T Consensus 555 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G--~~GEL~i~G~~v 631 (1389)
T TIGR03443 555 NVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG--EVGEIYVRAGGL 631 (1389)
T ss_pred CCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC--CceEEEeccccc
Confidence 011234555553 55666642 34667777 889999999999
Q ss_pred cccccCCchhhhcccc----------------------------CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeec
Q 048729 182 TVGYFKDKEATRRCIS----------------------------DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENI 233 (330)
Q Consensus 182 ~~gy~~~~~~~~~~~~----------------------------~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v 233 (330)
+.||+++|+.+.+.|. .++||+|||+|++++||.++|+||.||+||++|++|
T Consensus 632 ~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI 711 (1389)
T TIGR03443 632 AEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRI 711 (1389)
T ss_pred chhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEe
Confidence 9999999999887773 257999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCccc-C---------------------CCCCHHHHHHHHH
Q 048729 234 CSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL-T---------------------KKPTEKEIIEYCR 291 (330)
Q Consensus 234 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~---------------------~~~~~~~l~~~l~ 291 (330)
+|.+||++|.+||.|.+++|++..++..++.+++++++..+... . .....+++++.++
T Consensus 712 ~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 791 (1389)
T TIGR03443 712 ELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLK 791 (1389)
T ss_pred cHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999988877777889999887632110 0 0012578999999
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCcccHHHHHH
Q 048729 292 ARLPRYMVPRKVVFSEELPKTSTGKIQKYLLRE 324 (330)
Q Consensus 292 ~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~ 324 (330)
++|+.|++|..++++++||+|++||+||++|++
T Consensus 792 ~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 792 KKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 999999999999999999999999999999964
No 73
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.2e-44 Score=399.73 Aligned_cols=301 Identities=24% Similarity=0.291 Sum_probs=265.0
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
..++.++|.++++.+|+++|+++.++++||+||.++++++|++|.+.|+++||+|++++++++++++++||++++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------------hcc----------Cc---------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA--------------LSL----------FP--------------- 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--------------~~~----------~~--------------- 134 (330)
|+++.++.+++.++++..++++++++......+... ... .+
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~ 669 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPAAWLEGYSEENPGTELNPENLAYVIYTSGSTGK 669 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcchhhccCCCCCCCCCCCCCCeEEEEECCCcCCC
Confidence 999999999999999999999999976543221100 000 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 670 PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~ 749 (5163)
T PRK12316 670 PKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDT 749 (5163)
T ss_pred CCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeE
Confidence
Q ss_pred ---------------------------------------------------------hH------------HHHhhccCC
Q 048729 135 ---------------------------------------------------------QR------------ARLKARQGV 145 (330)
Q Consensus 135 ---------------------------------------------------------~~------------~~~~~~~G~ 145 (330)
+. .....++|.
T Consensus 750 ~~~~Ps~~~~l~~~~~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~ 829 (5163)
T PRK12316 750 LHFVPSMLQAFLQDEDVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGR 829 (5163)
T ss_pred EEeCHHHHHHHHhccccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCcc
Confidence 00 001234677
Q ss_pred cccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC------CCeEEeCceEEEecCceEEEE
Q 048729 146 KTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD------NGWFYTGDIGVMHADGYVEIK 219 (330)
Q Consensus 146 ~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------~g~~~TGD~~~~~~~G~l~~~ 219 (330)
|++|. +++|+|+ +++++|.+ +.|||+|+|++++.||+++|+.+.+.|.. ++||+|||+|++++||.++|+
T Consensus 830 p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~ 905 (5163)
T PRK12316 830 PIANL-ACYILDA-NLEPVPVG--VLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYA 905 (5163)
T ss_pred ccCCC-EEEEECC-CCCCCCCC--CceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEee
Confidence 77785 8888888 88999988 88999999999999999999999887742 459999999999999999999
Q ss_pred ecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCC
Q 048729 220 DRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMV 299 (330)
Q Consensus 220 GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 299 (330)
||.||+||++|++|+|.+||++|.+||+|.+++|++.+ ++.++++|+..++.. ...+++++.++++|+.|++
T Consensus 906 GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~----~~~~~l~~~l~~~Lp~y~v 977 (5163)
T PRK12316 906 GRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGG----DWREALKAHLAASLPEYMV 977 (5163)
T ss_pred cccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCC----CCHHHHHHHHHhhCCCccC
Confidence 99999999999999999999999999999999999986 568999999877644 5678999999999999999
Q ss_pred CceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 300 PRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 300 p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
|..|+++++||+|++||+||++|.+..
T Consensus 978 P~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 978 PAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred CCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 999999999999999999999997653
No 74
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.9e-42 Score=330.77 Aligned_cols=320 Identities=50% Similarity=0.817 Sum_probs=261.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhh
Q 048729 7 PNSANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVP 86 (330)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~ 86 (330)
.+......+++.++|...+..+|+++|+.+.++++||.||.+++.++|.+|.+.|+++||+|+++++|+++++..++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~ 91 (567)
T PLN02479 12 KNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVP 91 (567)
T ss_pred CccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 34445556789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH--------------------------------------
Q 048729 87 MSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE-------------------------------------- 128 (330)
Q Consensus 87 ~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-------------------------------------- 128 (330)
++|++++|+++.++.+++.++++..+++.+++++.+.+....
T Consensus 92 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
T PLN02479 92 MAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKG 171 (567)
T ss_pred hCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccC
Confidence 999999999999999999999999999999986543211000
Q ss_pred ---------H--------hcc---Cc------------------------------------------------------
Q 048729 129 ---------A--------LSL---FP------------------------------------------------------ 134 (330)
Q Consensus 129 ---------~--------~~~---~~------------------------------------------------------ 134 (330)
. ... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 172 AIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred cccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhH
Confidence 0 000 00
Q ss_pred -----------------------------------------------hHHHH-----h---------------------h
Q 048729 135 -----------------------------------------------QRARL-----K---------------------A 141 (330)
Q Consensus 135 -----------------------------------------------~~~~~-----~---------------------~ 141 (330)
..... . .
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~ 331 (567)
T PLN02479 252 CFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMS 331 (567)
T ss_pred HHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHH
Confidence 00000 0 0
Q ss_pred ccCC---cccCceeE--------------------------------------EEeCCCCCcccCCCCceecEEEEecCc
Q 048729 142 RQGV---KTVGLAEV--------------------------------------DVVNPETGESVKRDGVSLGEVVLRGGC 180 (330)
Q Consensus 142 ~~G~---~~~g~te~--------------------------------------~i~d~~~g~~~~~~~~~~Gel~v~~~~ 180 (330)
..|. ..||.||. +++|+.++.+++.++.+.|||+++|++
T Consensus 332 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~ 411 (567)
T PLN02479 332 EKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNM 411 (567)
T ss_pred hcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccc
Confidence 0011 12555553 344433566665543357999999999
Q ss_pred ccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCC
Q 048729 181 VTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMF 260 (330)
Q Consensus 181 ~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 260 (330)
++.|||++++.+.+.|. +|||+|||++++|++|++++.||.||++|++|++|++.+||+.+..+|.|.+++|++..++.
T Consensus 412 ~~~GY~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 490 (567)
T PLN02479 412 VMKGYLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDER 490 (567)
T ss_pred hhhhhhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccchh
Confidence 99999999999998887 89999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCceeEEEEEecCCcccC-CCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 261 WGEIPCAFVSLKRDLELT-KKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 261 ~~~~~~~~v~~~~~~~~~-~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.++.+++++++..+.... .....+++.+.++++|+.+..|..+.+ .++|+|++||++|+.|++.+..
T Consensus 491 ~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 491 WGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred cCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHh
Confidence 778899999887654211 013457899999999999999998877 6799999999999999988754
No 75
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.4e-42 Score=328.28 Aligned_cols=300 Identities=31% Similarity=0.489 Sum_probs=257.1
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEe------CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVY------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~------~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
..++.++|.+.++.+|+++|+++ .++.+||+||.+.++++|.+|.+.|+++||+|+++++|++++++.++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 45899999999999999999986 246899999999999999999999999999999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH-----H------------------------HHHH--------h
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY-----L------------------------LLEA--------L 130 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~------------------------~~~~--------~ 130 (330)
+|++++|+++.++.+++.++++..+++++++++.+.. . .... .
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPERDDT 180 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhccccccc
Confidence 9999999999999999999999999999998653210 0 0000 0
Q ss_pred c---------cCc-------------------------------------------------------------------
Q 048729 131 S---------LFP------------------------------------------------------------------- 134 (330)
Q Consensus 131 ~---------~~~------------------------------------------------------------------- 134 (330)
. ...
T Consensus 181 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~ 260 (538)
T TIGR03208 181 PDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMPLI 260 (538)
T ss_pred cccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHH
Confidence 0 000
Q ss_pred -----------------------------------------------------------------hH-------------
Q 048729 135 -----------------------------------------------------------------QR------------- 136 (330)
Q Consensus 135 -----------------------------------------------------------------~~------------- 136 (330)
..
T Consensus 261 ~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~ 340 (538)
T TIGR03208 261 LNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELLGALIVS 340 (538)
T ss_pred cCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEe
Confidence 00
Q ss_pred -------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc
Q 048729 137 -------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS 197 (330)
Q Consensus 137 -------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 197 (330)
.....+.|.+++|. +++++|+ ++.+++.+ +.|||+++|++++.||+++++.+.. .
T Consensus 341 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~--~ 414 (538)
T TIGR03208 341 AWGMTENGAVTVTEPDDALEKASTTDGRPLPGV-EVKVIDA-NGAKLSQG--ETGRLLVRGCSNFGGYLKRPHLNST--D 414 (538)
T ss_pred eeccCcCCCccccCcccchhhccCcccccCCCC-EEEEECC-CCCCCcCC--CCcEEEEecCcccccccCCcccccc--c
Confidence 00012456666774 7788887 78888877 7899999999999999999876543 3
Q ss_pred CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCccc
Q 048729 198 DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL 277 (330)
Q Consensus 198 ~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 277 (330)
.+|||+|||++++|++|.++++||.+|++|++|++|+|.+||+.+.++|+|.+++|++.++...++.+.+++++..+..
T Consensus 415 ~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~- 493 (538)
T TIGR03208 415 AEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCT- 493 (538)
T ss_pred CCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCC-
Confidence 4899999999999999999999999999999999999999999999999999999999988877888999998877644
Q ss_pred CCCCCHHHHHHHHHh-cCCCCCCCceEEEccCCCCCCCCcccHHHHH
Q 048729 278 TKKPTEKEIIEYCRA-RLPRYMVPRKVVFSEELPKTSTGKIQKYLLR 323 (330)
Q Consensus 278 ~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 323 (330)
.+.+++.+.+++ +++.+++|..+.+++++|+|++||++|++|+
T Consensus 494 ---~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 494 ---LDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred ---CCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 667889999985 7999999999999999999999999999986
No 76
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.7e-43 Score=394.51 Aligned_cols=306 Identities=20% Similarity=0.250 Sum_probs=258.7
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
..++.++|.++++++||++|+++.++++||+||.+.++++|++|.+.|+++|++|++++++++++++.+||++++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-------------------c----------Cc----------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS-------------------L----------FP---------- 134 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-------------------~----------~~---------- 134 (330)
|+++.++.+++.++++..+++++++++........... . .+
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ayvi~TS 3878 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEVQAGEVASHNPGIYSGPDNLAYVIYTS 3878 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecccccccccccCCCCCCCCCceEEEEECC
Confidence 99999999999999999999999998754321110000 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 3879 GSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~ 3958 (4334)
T PRK05691 3879 GSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQA 3958 (4334)
T ss_pred CCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHH
Confidence
Q ss_pred ----------------------------------------hHHH-----------------------------------H
Q 048729 135 ----------------------------------------QRAR-----------------------------------L 139 (330)
Q Consensus 135 ----------------------------------------~~~~-----------------------------------~ 139 (330)
.... .
T Consensus 3959 ~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~ 4038 (4334)
T PRK05691 3959 QGITVLESVPSLIQGMLAEDRQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGS 4038 (4334)
T ss_pred cCCeEEEeCHHHHHHHHhhccccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCC
Confidence 0000 0
Q ss_pred hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc-------CCCeEEeCceEEEec
Q 048729 140 KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS-------DNGWFYTGDIGVMHA 212 (330)
Q Consensus 140 ~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~~g~~~TGD~~~~~~ 212 (330)
..++|.|+.|. ++.|+|. .++++|.| ..|||+|+|+.+++||+++|+.+.+.|. .++||+|||++++++
T Consensus 4039 ~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~ 4114 (4334)
T PRK05691 4039 YLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS 4114 (4334)
T ss_pred cCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC
Confidence 12355555553 5666666 77888888 8899999999999999999999998883 246999999999999
Q ss_pred CceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHh
Q 048729 213 DGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRA 292 (330)
Q Consensus 213 ~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~ 292 (330)
||.++|+||.|++||++|+||++.+||+.|.++|+|.+++|+.... ..++.++++++...+.... ....+++++.+++
T Consensus 4115 dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~~-~~~~~l~a~~~~~~~~~~~-~~~~~~l~~~l~~ 4192 (4334)
T PRK05691 4115 DGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQEG-VNGKHLVGYLVPHQTVLAQ-GALLERIKQRLRA 4192 (4334)
T ss_pred CCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEecC-CCCcEEEEEEeCCcccccc-hHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998876543 3456888888876553211 1235789999999
Q ss_pred cCCCCCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 293 RLPRYMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 293 ~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
+||.|++|..|+++++||+|+|||+||++|.+.
T Consensus 4193 ~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4193 ELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred hCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 999999999999999999999999999999764
No 77
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-42 Score=327.13 Aligned_cols=295 Identities=26% Similarity=0.437 Sum_probs=243.9
Q ss_pred HHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCC
Q 048729 23 RAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLD 100 (330)
Q Consensus 23 ~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~ 100 (330)
.++..+|+++|+.+. ++++||+||.+.++++|++|.+.|+++||+|+++++|++++++.+|||+++|++++++++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 466789999999873 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEcccchHHHH-----------------------H---Hh------------------------
Q 048729 101 AHTLSVLLQHSESKLVFVDHLHTYLLL-----------------------E---AL------------------------ 130 (330)
Q Consensus 101 ~~~l~~~l~~~~~~~i~~~~~~~~~~~-----------------------~---~~------------------------ 130 (330)
++++.+++...++++++++........ . ..
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 164 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAGAGPRLTEQPCGAVMLYSSGTTGFPK 164 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcccCCCCCCCcccEEEEeCCCCCCCCC
Confidence 999999999888888776432110000 0 00
Q ss_pred ----------------------c-cC--c---------------------------------------------------
Q 048729 131 ----------------------S-LF--P--------------------------------------------------- 134 (330)
Q Consensus 131 ----------------------~-~~--~--------------------------------------------------- 134 (330)
. .. .
T Consensus 165 gV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t 244 (501)
T PRK13390 165 GIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGHVERYRIT 244 (501)
T ss_pred EEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHHHHHcCCe
Confidence 0 00 0
Q ss_pred -----------------------------------------hHH-------------------------------HHhhc
Q 048729 135 -----------------------------------------QRA-------------------------------RLKAR 142 (330)
Q Consensus 135 -----------------------------------------~~~-------------------------------~~~~~ 142 (330)
... ....+
T Consensus 245 ~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 324 (501)
T PRK13390 245 VTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGS 324 (501)
T ss_pred EEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCC
Confidence 000 00112
Q ss_pred cCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC--CCeEEeCceEEEecCceEEEEe
Q 048729 143 QGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD--NGWFYTGDIGVMHADGYVEIKD 220 (330)
Q Consensus 143 ~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--~g~~~TGD~~~~~~~G~l~~~G 220 (330)
+|.|++| +++++|+ +|++++.+ +.|||+++|++++.||+++++.+...+.. ++|++|||++++|++|.+++.|
T Consensus 325 ~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~g 399 (501)
T PRK13390 325 VGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLAD 399 (501)
T ss_pred cCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEee
Confidence 3334443 2556666 78888887 88999999999999999999988877643 6799999999999999999999
Q ss_pred cCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCC
Q 048729 221 RSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVP 300 (330)
Q Consensus 221 R~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p 300 (330)
|.||++|++|.+|+|.+||+.+.++|+|.++++++.+++..++.+++++++..+.... ....+++.+.++++|+.+++|
T Consensus 400 R~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P 478 (501)
T PRK13390 400 RKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGS-DELARELIDYTRSRIAHYKAP 478 (501)
T ss_pred ccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcc-hhhHHHHHHHHHHhcccCCCC
Confidence 9999999999999999999999999999999999999988888999998877653211 123568999999999999999
Q ss_pred ceEEEccCCCCCCCCcccHHHHH
Q 048729 301 RKVVFSEELPKTSTGKIQKYLLR 323 (330)
Q Consensus 301 ~~~~~v~~lP~t~~GKv~r~~l~ 323 (330)
..++++++||+|++||++|++|+
T Consensus 479 ~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 479 RSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred cEEEEeccCCCCCccceehhhcC
Confidence 99999999999999999999874
No 78
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.2e-42 Score=326.97 Aligned_cols=304 Identities=31% Similarity=0.482 Sum_probs=259.0
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
..++.++|.+.++.+|+++|+++.++++||.||.+.++++|.+|. ..|+++||+|+++++|++++++.++||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 357999999999999999999999999999999999999999998 5899999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH-------------------------------------------
Q 048729 93 NNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA------------------------------------------- 129 (330)
Q Consensus 93 ~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------------------------------- 129 (330)
+|+++.++.+.+.++++..+++++++++.....+...
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLP 181 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCC
Confidence 9999999999999999999999988654321110000
Q ss_pred --------h----------ccCc---------------------------------------------------------
Q 048729 130 --------L----------SLFP--------------------------------------------------------- 134 (330)
Q Consensus 130 --------~----------~~~~--------------------------------------------------------- 134 (330)
. ....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 261 (560)
T PRK08974 182 DAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYH 261 (560)
T ss_pred CcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHH
Confidence 0 0000
Q ss_pred -------------------------------------------------------------------------------h
Q 048729 135 -------------------------------------------------------------------------------Q 135 (330)
Q Consensus 135 -------------------------------------------------------------------------------~ 135 (330)
.
T Consensus 262 ~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~ 341 (560)
T PRK08974 262 IFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAV 341 (560)
T ss_pred HHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHH
Confidence 0
Q ss_pred HH-------------------------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCccccc
Q 048729 136 RA-------------------------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 184 (330)
Q Consensus 136 ~~-------------------------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~g 184 (330)
.. ....+.|.|++|. +++++|+ ++++++.+ +.|||+++|+.++.|
T Consensus 342 ~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~~g 417 (560)
T PRK08974 342 AERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPST-EIKLVDD-DGNEVPPG--EPGELWVKGPQVMLG 417 (560)
T ss_pred HHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCC-EEEEECC-CCCCCCCC--CceEEEEecCCcchh
Confidence 00 0012345555564 6777887 78888888 889999999999999
Q ss_pred ccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCce
Q 048729 185 YFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEI 264 (330)
Q Consensus 185 y~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 264 (330)
|+++++.+...+. +|||+|||+++++++|.++++||.+|+++++|.++++.+||+.+.++|+|.+++|++.++...++.
T Consensus 418 y~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~ 496 (560)
T PRK08974 418 YWQRPEATDEVIK-DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEA 496 (560)
T ss_pred hcCChhhhhhhhh-cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceE
Confidence 9999998888775 899999999999999999999999999999999999999999999999999999999988877777
Q ss_pred eEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhh
Q 048729 265 PCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 265 ~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~ 327 (330)
+.++++.... . ...+++.+.+.++++.+..|..+.++++||+|++||++|+.|++.+.
T Consensus 497 ~~~~v~~~~~-~----~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~ 554 (560)
T PRK08974 497 VKIFVVKKDP-S----LTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEAR 554 (560)
T ss_pred EEEEEECCCC-C----CCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHH
Confidence 7777765432 2 45688999999999999999999999999999999999999998764
No 79
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-42 Score=331.55 Aligned_cols=307 Identities=23% Similarity=0.311 Sum_probs=246.1
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeC---------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~---------~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la 84 (330)
..|+.+++.+.++.+|+++|+++. .+.+||+||.++++++|++|.+. +++||+|+++++|++++++++||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA 111 (612)
T PRK12476 33 GTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFA 111 (612)
T ss_pred cCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHH
Confidence 468999999999999999999863 14899999999999999999976 89999999999999999999999
Q ss_pred hhhcCcEEeec-CCCCC--HHHHHHHHHhcCCcEEEEcccchHHHHHHh----------------------c-----cCc
Q 048729 85 VPMSGAILNNI-NTRLD--AHTLSVLLQHSESKLVFVDHLHTYLLLEAL----------------------S-----LFP 134 (330)
Q Consensus 85 ~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~----------------------~-----~~~ 134 (330)
|+++|++++|+ ++.++ ++++.++++..++++++++......+.... . ...
T Consensus 112 ~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 191 (612)
T PRK12476 112 AIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPDSAGESFVPVELD 191 (612)
T ss_pred HHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccccccccccCCCCC
Confidence 99999999999 56665 789999999999999998764433211000 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 192 ~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~ 271 (612)
T PRK12476 192 TDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAF 271 (612)
T ss_pred CCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHH
Confidence
Q ss_pred --------------------------------hH---H---H---Hh---------------------------------
Q 048729 135 --------------------------------QR---A---R---LK--------------------------------- 140 (330)
Q Consensus 135 --------------------------------~~---~---~---~~--------------------------------- 140 (330)
.. . . ..
T Consensus 272 ~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (612)
T PRK12476 272 VRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVVLIIGSEPVSIDAVTTFNKAFAPYGLPRTAF 351 (612)
T ss_pred HHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHheEEecccCCCHHHHHHHHHHHHhcCCCcccc
Confidence 00 0 0 00
Q ss_pred --------------------------------------------------hccCCcccCceeEEEeCCCCCcccCCCCce
Q 048729 141 --------------------------------------------------ARQGVKTVGLAEVDVVNPETGESVKRDGVS 170 (330)
Q Consensus 141 --------------------------------------------------~~~G~~~~g~te~~i~d~~~g~~~~~~~~~ 170 (330)
.++|.+++|. +++|+|+++|++++.+ +
T Consensus 352 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~-~v~ivd~~~g~~~~~g--~ 428 (612)
T PRK12476 352 KPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQ-WAVIVDPDTGAELPDG--E 428 (612)
T ss_pred ccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCC-EEEEEeCCCCcCCCCC--C
Confidence 0123333343 4555666348888877 8
Q ss_pred ecEEEEecCcccccccCCchhhhcccc------------------CCCeEEeCceEEEecCceEEEEecCCCeEEeCCee
Q 048729 171 LGEVVLRGGCVTVGYFKDKEATRRCIS------------------DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGEN 232 (330)
Q Consensus 171 ~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~ 232 (330)
.|||+++|++++.||+++|+.+.+.|. .++||+|||+|+++ +|+++|+||.||+||++|++
T Consensus 429 ~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~ 507 (612)
T PRK12476 429 VGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVIDGRN 507 (612)
T ss_pred EEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEECCcc
Confidence 899999999999999999998887774 13599999999985 99999999999999999999
Q ss_pred cCHHHHHHHHhc-CcCcce--EEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCC-CCCC-CceEEEcc
Q 048729 233 ICSAEVESVLYS-ITAVNE--AAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLP-RYMV-PRKVVFSE 307 (330)
Q Consensus 233 v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~-~~~~-p~~~~~v~ 307 (330)
|+|.+||++|.+ ||.|.+ +++++.+++. ++++++++++.++... .+.+++.+.+++++. .+.+ |+.+.+++
T Consensus 508 I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~---~~~~~l~~~~~~~l~~~~~~~p~~v~~v~ 583 (612)
T PRK12476 508 HYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSR---ADPAPAIDAIRAAVSRRHGLAVADVRLVP 583 (612)
T ss_pred cCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCccc---ccHHHHHHHHHHHHHHhhCCcceEEEEEC
Confidence 999999999985 899999 7778887766 7889999888765321 456788888888877 4776 67888887
Q ss_pred --CCCCCCCCcccHHHHHHHhhhc
Q 048729 308 --ELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 308 --~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+||+|++||++|++|++++.+.
T Consensus 584 ~~~lP~t~~GKi~r~~L~~~~~~~ 607 (612)
T PRK12476 584 AGAIPRTTSGKLARRACRAQYLDG 607 (612)
T ss_pred CCCcCcCCchHHHHHHHHHHHHcC
Confidence 6999999999999999998654
No 80
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3e-42 Score=324.92 Aligned_cols=309 Identities=21% Similarity=0.282 Sum_probs=255.5
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
+++.+.|.+.+..+|+++++.+.++++||.||.+.+.++|.+|.+.|+++||+|+++.+++.++++.++||++.|+++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccch-----------HHHHHHh---c------cCc--------------------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHT-----------YLLLEAL---S------LFP-------------------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----------~~~~~~~---~------~~~-------------------- 134 (330)
+++.++.+.+.++++..+++++++..... ..+.... . ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v 161 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLEILGIPVITLDELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGV 161 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccccccCCcEEehHHhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEE
Confidence 99999999999999999999999864320 0000000 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 241 (503)
T PRK04813 162 QISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVST 241 (503)
T ss_pred EeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeC
Confidence
Q ss_pred ----------------------------------hHHHH------------------------------------hhccC
Q 048729 135 ----------------------------------QRARL------------------------------------KARQG 144 (330)
Q Consensus 135 ----------------------------------~~~~~------------------------------------~~~~G 144 (330)
....+ ..+.|
T Consensus 242 p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g 321 (503)
T PRK04813 242 PSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIG 321 (503)
T ss_pred hHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCccc
Confidence 00000 01133
Q ss_pred CcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc---CCCeEEeCceEEEecCceEEEEec
Q 048729 145 VKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS---DNGWFYTGDIGVMHADGYVEIKDR 221 (330)
Q Consensus 145 ~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~g~~~TGD~~~~~~~G~l~~~GR 221 (330)
.+..|. +++|+|+ +|.+++.+ +.|||+++|++++.||+++++.+...|. ..+||+|||++++ ++|.+++.||
T Consensus 322 ~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR 396 (503)
T PRK04813 322 YAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGR 396 (503)
T ss_pred ccCCCC-EEEEECC-CCCCCCCC--CceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEecc
Confidence 333443 4456665 67777777 7899999999999999999998887763 2359999999999 8999999999
Q ss_pred CCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCc
Q 048729 222 SKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPR 301 (330)
Q Consensus 222 ~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~ 301 (330)
.+|++|++|+++++.+||+.+.++|+|.++++++..++..++.++++++...+.........+++.++++++++++.+|.
T Consensus 397 ~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~ 476 (503)
T PRK04813 397 IDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPR 476 (503)
T ss_pred ccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCe
Confidence 99999999999999999999999999999999998776667788888887664221111233678999999999999999
Q ss_pred eEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 302 KVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 302 ~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+++++++|+|++||++|++|++.+.+
T Consensus 477 ~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 477 KFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred EEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 999999999999999999999998753
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-42 Score=356.21 Aligned_cols=308 Identities=22% Similarity=0.269 Sum_probs=264.9
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeC-CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYN-NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~-~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
....++.+++.+.++++|+++|+++. ++++||+||.++++++|++|.+ ++++||+|+++++|++++++.++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 34568999999999999999999974 6899999999999999999986 489999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH-------------------------------H------h---
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE-------------------------------A------L--- 130 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-------------------------------~------~--- 130 (330)
+++|+++..+.+++.+++++.+++++++++...+.+.. . .
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPARL 770 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHHH
Confidence 99999999999999999999999999987643332210 0 0
Q ss_pred ------ccCc----------------------------------------------------------------------
Q 048729 131 ------SLFP---------------------------------------------------------------------- 134 (330)
Q Consensus 131 ------~~~~---------------------------------------------------------------------- 134 (330)
....
T Consensus 771 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~ 850 (1146)
T PRK08633 771 LKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGI 850 (1146)
T ss_pred HHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCC
Confidence 0000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 851 ~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~Y 930 (1146)
T PRK08633 851 KVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGY 930 (1146)
T ss_pred EEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeeccc
Confidence
Q ss_pred ---h--------HH------------HHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchh
Q 048729 135 ---Q--------RA------------RLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEA 191 (330)
Q Consensus 135 ---~--------~~------------~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 191 (330)
+ .. ....++|.|++|. +++++|++++++++.+ +.|||+++|++++.||+++|+.
T Consensus 931 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~ 1007 (1146)
T PRK08633 931 GATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIGGPQVMKGYLGDPEK 1007 (1146)
T ss_pred ccccCcceEEEecCcccccccccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEcCCCccccccCCccc
Confidence 0 00 0123578888886 8999997789999988 8899999999999999999998
Q ss_pred hhccccC---CCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCc--CcceEEEEeecCCCCCceeE
Q 048729 192 TRRCISD---NGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSIT--AVNEAAVVARPDMFWGEIPC 266 (330)
Q Consensus 192 ~~~~~~~---~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~--~v~~~~v~~~~~~~~~~~~~ 266 (330)
+.+.+.+ +|||+|||++++|+||++++.||.||++|++|++|+|.+||+.+.+|| .+.+++|++.+++..+++++
T Consensus 1008 t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~ 1087 (1146)
T PRK08633 1008 TAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLV 1087 (1146)
T ss_pred hHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEE
Confidence 8877752 289999999999999999999999999999999999999999999998 46689999999988888998
Q ss_pred EEEEecCCcccCCCCCHHHHHHHHHh-cCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhcC
Q 048729 267 AFVSLKRDLELTKKPTEKEIIEYCRA-RLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSVS 330 (330)
Q Consensus 267 ~~v~~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~~ 330 (330)
++++.. . .+.+++.+.+.+ +++++.+|..+++++++|+|++||+||++|++++++++
T Consensus 1088 ~~v~~~---~----~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~ 1145 (1146)
T PRK08633 1088 VLHTCG---A----EDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALALL 1145 (1146)
T ss_pred EEEecC---c----cCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhc
Confidence 888752 1 456788888875 69999999999999999999999999999999988763
No 82
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.7e-42 Score=335.13 Aligned_cols=314 Identities=18% Similarity=0.227 Sum_probs=245.0
Q ss_pred CCCCCHHHH-HHHHHHhcCCCcEEEeCC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 12 STPLTTLGF-LERAAAAYTDCPSLVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 12 ~~~~~~~~~-l~~~~~~~p~~~a~~~~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
...+|+.+. |.+.++.+|+++|+++.+ +++||+||.+++.++|++|++.|+++||+|+++++|++++++++
T Consensus 171 g~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~ 250 (728)
T PLN03052 171 GAVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIY 250 (728)
T ss_pred CCEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHH
Confidence 344566664 444446789999999854 37999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch---------------------------------------
Q 048729 83 FGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT--------------------------------------- 123 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~--------------------------------------- 123 (330)
|||+++|++++|+++.++++++.+++++.+++++|+.+...
T Consensus 251 LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 330 (728)
T PLN03052 251 LAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDM 330 (728)
T ss_pred HHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCc
Confidence 99999999999999999999999999999999999865321
Q ss_pred --HHHHHHh--------------c-cCc----------------------------------------------------
Q 048729 124 --YLLLEAL--------------S-LFP---------------------------------------------------- 134 (330)
Q Consensus 124 --~~~~~~~--------------~-~~~---------------------------------------------------- 134 (330)
..+.... . ..+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~ 410 (728)
T PLN03052 331 SWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMM 410 (728)
T ss_pred cHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHh
Confidence 0000000 0 000
Q ss_pred ---------------------------------------------------------------------------hH---
Q 048729 135 ---------------------------------------------------------------------------QR--- 136 (330)
Q Consensus 135 ---------------------------------------------------------------------------~~--- 136 (330)
..
T Consensus 411 g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~ 490 (728)
T PLN03052 411 GPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLW 490 (728)
T ss_pred HHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHH
Confidence 00
Q ss_pred ------------------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCc--cccc
Q 048729 137 ------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGC--VTVG 184 (330)
Q Consensus 137 ------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~--~~~g 184 (330)
....+++|.|++|+ ++.|+|+ +|++++.+..+.|||+++++. ...+
T Consensus 491 ~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~-~v~v~d~-~g~~v~~g~~~~GEL~v~~~~~~~~~~ 568 (728)
T PLN03052 491 LMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGC-KLFILDD-SGNPYPDDAPCTGELALFPLMFGASST 568 (728)
T ss_pred HHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCc-eEEEECC-CCCCCCCCCCceEEEEEeCCCCCCCcc
Confidence 00012355667775 8888897 899998762125999998653 3456
Q ss_pred ccCCchhhhcccc------CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHh-cCcCcceEEEEeec
Q 048729 185 YFKDKEATRRCIS------DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLY-SITAVNEAAVVARP 257 (330)
Q Consensus 185 y~~~~~~~~~~~~------~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~ 257 (330)
|+++. .....|. .+.||+|||++++|++|+++++||+||+||++|+||++.+||+++. .||+|.+++|++.+
T Consensus 569 ~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~ 647 (728)
T PLN03052 569 LLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVP 647 (728)
T ss_pred ccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeee
Confidence 77653 3333332 1239999999999999999999999999999999999999999995 79999999999999
Q ss_pred CCCCC-ceeEEEEEec--CCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 258 DMFWG-EIPCAFVSLK--RDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 258 ~~~~~-~~~~~~v~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++..+ ++++++|+++ ++...+.....+.+.+.++++|+++.+|..|+++++||+|++||++|+.|++.+.+
T Consensus 648 d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 648 PPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred cCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHh
Confidence 88665 7899999987 44331101223444455678899999999999999999999999999999998864
No 83
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-42 Score=387.62 Aligned_cols=306 Identities=19% Similarity=0.243 Sum_probs=264.5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 11 NSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
.....++.++|.++++.+|+++|+.+.++++||+||.+.++++|++|.+.|+++|++|++++++++++++++||++++|+
T Consensus 1127 ~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~ 1206 (4334)
T PRK05691 1127 APAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGG 1206 (4334)
T ss_pred CCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh------------c-------c---Cc--------------
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL------------S-------L---FP-------------- 134 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------------~-------~---~~-------------- 134 (330)
+++|+++.++.+++.++++..++++++++......+.... . . .+
T Consensus 1207 ~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG 1286 (4334)
T PRK05691 1207 AYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDSWPSQAPGLHLHGDNLAYVIYTSGSTG 1286 (4334)
T ss_pred EEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeeccccccccCCCCCCCCCCCCCeEEEEEcCCCCC
Confidence 9999999999999999999999999998765433221100 0 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 1287 ~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt 1366 (4334)
T PRK05691 1287 QPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVT 1366 (4334)
T ss_pred CCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCe
Confidence
Q ss_pred -------------------------------------h---H------------------------------HHHhhccC
Q 048729 135 -------------------------------------Q---R------------------------------ARLKARQG 144 (330)
Q Consensus 135 -------------------------------------~---~------------------------------~~~~~~~G 144 (330)
. . .....++|
T Consensus 1367 ~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG 1446 (4334)
T PRK05691 1367 TLHFVPPLLQLFIDEPLAAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIG 1446 (4334)
T ss_pred EEECcHHHHHHHHhCcccccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCccc
Confidence 0 0 00112456
Q ss_pred CcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC-------CCeEEeCceEEEecCceEE
Q 048729 145 VKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD-------NGWFYTGDIGVMHADGYVE 217 (330)
Q Consensus 145 ~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD~~~~~~~G~l~ 217 (330)
.|+.|. ++.|+|+ ++++++.| +.|||+|+|+++++||+++|+.+.+.|.. .+||+|||+|++++||.++
T Consensus 1447 ~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~ 1522 (4334)
T PRK05691 1447 RPLGNV-LCRVLDA-ELNLLPPG--VAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALE 1522 (4334)
T ss_pred ceeCCC-EEEEECC-CCCCCCCC--CceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEE
Confidence 777775 7888887 78999988 88999999999999999999999888742 2499999999999999999
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRY 297 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 297 (330)
|+||+|++||++|++|+|.+||+.|.++|+|.+++|+...+. .+..++++++...+.. ...+++++.++++|+.|
T Consensus 1523 ~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~----~~~~~l~~~l~~~Lp~y 1597 (4334)
T PRK05691 1523 YLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQE----AEAERLKAALAAELPEY 1597 (4334)
T ss_pred EecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCC----CCHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999976654 3478888888776544 56789999999999999
Q ss_pred CCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 298 MVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 298 ~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
++|..++++++||+|++||+||++|.+.
T Consensus 1598 ~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1598 MVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred cCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 9999999999999999999999998653
No 84
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-42 Score=384.65 Aligned_cols=310 Identities=21% Similarity=0.290 Sum_probs=264.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
....++.++|.++++.+||++|+++.++++||+||.+.++++|++|.+.|+++|++|++++++++++++.+|||+++|++
T Consensus 509 ~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG~~ 588 (3956)
T PRK12467 509 YAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAGGA 588 (3956)
T ss_pred CCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH--------------H----hccC------c-------------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE--------------A----LSLF------P------------- 134 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~--------------~----~~~~------~------------- 134 (330)
++|+++.++.+++.+++++.+++++++++.....+.. . .... +
T Consensus 589 ~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~iiyTSGST 668 (3956)
T PRK12467 589 YVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPVPAGLRSLCLDEPADLLCGYSGHNPEVALDPDNLAYVIYTSGST 668 (3956)
T ss_pred EeccCCCChHHHHHHHHHhcCCCEEEechhhhhhcccccCccEEEeccccccccccCCCCCCCCCCCCCeEEEEECCCCC
Confidence 9999999999999999999999999998643321110 0 0000 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 669 G~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~v 748 (3956)
T PRK12467 669 GQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELFGALASGATLHLLPPDCARDAEAFAALMADQGV 748 (3956)
T ss_pred CCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCC
Confidence
Q ss_pred -----------------------------------------------------------hH-----------HH---Hhh
Q 048729 135 -----------------------------------------------------------QR-----------AR---LKA 141 (330)
Q Consensus 135 -----------------------------------------------------------~~-----------~~---~~~ 141 (330)
+. .. ...
T Consensus 749 t~~~~~Ps~~~~l~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~ 828 (3956)
T PRK12467 749 TVLKIVPSHLQALLQASRVALPRPQRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNV 828 (3956)
T ss_pred eEEEcCHHHHHHHHhhhccccCCcccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCC
Confidence 00 00 013
Q ss_pred ccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC-------CCeEEeCceEEEecCc
Q 048729 142 RQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD-------NGWFYTGDIGVMHADG 214 (330)
Q Consensus 142 ~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD~~~~~~~G 214 (330)
++|.|++|. ++.|+|+ ++++++.+ +.|||+|+|+++++||+++|+.+.+.|.. ++||+|||+|++++||
T Consensus 829 ~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG 904 (3956)
T PRK12467 829 PIGQPLANL-GLYILDH-YLNPVPVG--VVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADG 904 (3956)
T ss_pred cccCCcCCC-EEEEECC-CCCCCCCC--CceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCC
Confidence 467777775 8888888 78999988 88999999999999999999999888742 3499999999999999
Q ss_pred eEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc-cCCCCCHHHHHHHHHhc
Q 048729 215 YVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE-LTKKPTEKEIIEYCRAR 293 (330)
Q Consensus 215 ~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~l~~~ 293 (330)
.++|+||.||+||++|++|+|.+||+.|.++|+|.+++|++..+. .++.++++++...... .......+++++.++++
T Consensus 905 ~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~a~v~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~ 983 (3956)
T PRK12467 905 VIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVREAVVLAQPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQV 983 (3956)
T ss_pred cEEEeccccCeEEECCEecCHHHHHHHHHhCCCcceEEEEEEcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999986543 4567888888553321 11125678999999999
Q ss_pred CCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 294 LPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 294 l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
|+.|++|..++++++||+|+|||+||++|.+..
T Consensus 984 Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 1016 (3956)
T PRK12467 984 LPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPD 1016 (3956)
T ss_pred CchhcCCceEeeecccCCCCCCCcCHhhcCCcc
Confidence 999999999999999999999999999997653
No 85
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.7e-42 Score=336.10 Aligned_cols=308 Identities=22% Similarity=0.329 Sum_probs=241.4
Q ss_pred CCCHHHHHHHHHHhcCC-CcEEEeC-CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 14 PLTTLGFLERAAAAYTD-CPSLVYN-NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~-~~a~~~~-~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
..|+.++|.+.++.+|+ ++|+.+. ++++||+||.+.++++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v 281 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRI 281 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCc
Confidence 46899999999999998 6888764 47899999999999999999976 599999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHH-----HH------------H----------------H--hc----c
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL-----LL------------E----------------A--LS----L 132 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~------------~----------------~--~~----~ 132 (330)
++|+++.++++++.++++.+++++++++...... +. . . .. .
T Consensus 282 ~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (718)
T PRK08043 282 PAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPRLAQVK 361 (718)
T ss_pred ccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCccccCC
Confidence 9999999999999999999999999986543211 00 0 0 00 0
Q ss_pred -Cc-----------------------------------------------------------------------------
Q 048729 133 -FP----------------------------------------------------------------------------- 134 (330)
Q Consensus 133 -~~----------------------------------------------------------------------------- 134 (330)
..
T Consensus 362 ~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 441 (718)
T PRK08043 362 QQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSP 441 (718)
T ss_pred CCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCc
Confidence 00
Q ss_pred -----------------------------------------------------hHHHHhhccCC---cccCceeEEEe--
Q 048729 135 -----------------------------------------------------QRARLKARQGV---KTVGLAEVDVV-- 156 (330)
Q Consensus 135 -----------------------------------------------------~~~~~~~~~G~---~~~g~te~~i~-- 156 (330)
....+....|. ..||.||+..+
T Consensus 442 ~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~ 521 (718)
T PRK08043 442 LHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVS 521 (718)
T ss_pred ccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEE
Confidence 00001111222 23666664311
Q ss_pred -C-C------CCCcccCC---------CCceecEEEEecCcccccccCC--chh-------hhccccCCCeEEeCceEEE
Q 048729 157 -N-P------ETGESVKR---------DGVSLGEVVLRGGCVTVGYFKD--KEA-------TRRCISDNGWFYTGDIGVM 210 (330)
Q Consensus 157 -d-~------~~g~~~~~---------~~~~~Gel~v~~~~~~~gy~~~--~~~-------~~~~~~~~g~~~TGD~~~~ 210 (330)
. + .-|++++. +.++.|||+++|++++.||+++ ++. +...+..+|||+|||+|++
T Consensus 522 ~~~~~~~~~~svG~p~pg~~~~i~d~~~~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~ 601 (718)
T PRK08043 522 INVPMAAKPGTVGRILPGMDARLLSVPGIEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRF 601 (718)
T ss_pred ecCCcccCCCCCCCcCCCCeeEEecCCCCCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEE
Confidence 0 0 01222220 0114599999999999999983 432 1122223799999999999
Q ss_pred ecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHH
Q 048729 211 HADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYC 290 (330)
Q Consensus 211 ~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l 290 (330)
|+||++++.||.+|+||++|++|+|.+||+.+.+++.+.++++++.+++..++.+++++. +.. .+.+++.+.+
T Consensus 602 d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~---~~~----~~~~~l~~~~ 674 (718)
T PRK08043 602 DEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT---DSE----LTREKLQQYA 674 (718)
T ss_pred cCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc---Ccc----cCHHHHHHHH
Confidence 999999999999999999999999999999999999888888898888877888877653 222 5678899999
Q ss_pred Hhc-CCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 291 RAR-LPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 291 ~~~-l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
+++ |+.|++|..+.++++||+|++||++|++|++++.+.
T Consensus 675 ~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 675 REHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred HhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhcc
Confidence 987 999999999999999999999999999999988653
No 86
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=318.26 Aligned_cols=297 Identities=29% Similarity=0.430 Sum_probs=256.6
Q ss_pred cCCCcEEEeCC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCH
Q 048729 28 YTDCPSLVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA 101 (330)
Q Consensus 28 ~p~~~a~~~~~------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~ 101 (330)
.++.+++++.+ ..+||.|+.+.+.++|..|...|+++||+|++++|+.++++++.|||.++|+++.++...+++
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~ 157 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSA 157 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCH
Confidence 48888988742 348999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEcccchHHH---------HHHhccCc--------------------------------------
Q 048729 102 HTLSVLLQHSESKLVFVDHLHTYLL---------LEALSLFP-------------------------------------- 134 (330)
Q Consensus 102 ~~l~~~l~~~~~~~i~~~~~~~~~~---------~~~~~~~~-------------------------------------- 134 (330)
..+...+...+++++++........ ..+.....
T Consensus 158 ~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~~~~~~~~~ 237 (626)
T KOG1175|consen 158 KELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASPEHPCVPVK 237 (626)
T ss_pred HHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCCCCCceecC
Confidence 9999999999999999875432211 11000000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 238 ~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p 317 (626)
T KOG1175|consen 238 AEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPP 317 (626)
T ss_pred ccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 318 ~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEt 397 (626)
T KOG1175|consen 318 FDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTET 397 (626)
T ss_pred CChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeecc
Confidence
Q ss_pred ---------hH-HHHhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecC---cccccccCCchhhhccccC--C
Q 048729 135 ---------QR-ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGG---CVTVGYFKDKEATRRCISD--N 199 (330)
Q Consensus 135 ---------~~-~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~--~ 199 (330)
.. +..+++.+.|..|. .+.|.|+ +|++++.++ +.|+|++..+ +.+++||++++.....+.. .
T Consensus 398 G~~~i~~~~g~~p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 398 GGICITPKPGKLPIKPGSAGKPFPGY-DVQILDE-NGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred CceeeeccCCCCCcCccccCCCCCCc-ceEEECC-CCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 11 34556677788887 8999999 999998876 7799999965 6789999999955554433 7
Q ss_pred CeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC
Q 048729 200 GWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK 279 (330)
Q Consensus 200 g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 279 (330)
|+|.|||.+++|++|++++.||.||+++++|.|+++.|||+++.+||.|.|++|++.+++..++.+.+||+++++.. ..
T Consensus 475 g~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~-~~ 553 (626)
T KOG1175|consen 475 GYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSH-DP 553 (626)
T ss_pred ceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCC-Ch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999943 22
Q ss_pred CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 280 KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 280 ~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
....++|++.+++.+.+++.|+.|.+++.||+|.+||+.|+.|++.+.+
T Consensus 554 ~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g 602 (626)
T KOG1175|consen 554 EQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASG 602 (626)
T ss_pred HHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhcc
Confidence 2556888899999999999999999999999999999999999998753
No 87
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.4e-42 Score=323.87 Aligned_cols=296 Identities=24% Similarity=0.301 Sum_probs=230.4
Q ss_pred HHHHHHHHHHhcCCCcEEEeCC----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEE
Q 048729 17 TLGFLERAAAAYTDCPSLVYNN----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 17 ~~~~l~~~~~~~p~~~a~~~~~----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~ 92 (330)
+.++|.+.++++|+++|+++.+ +++||+||.++++++|++|.+. ++||+|+++++|++++++.+|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 7899999999999999999876 7899999999999999999977 799999999999999999999999999986
Q ss_pred eecCCC-------CCHHHHHHHHHhcCCcEEEEcccchHHHHHHh----------------c-c----Cc----------
Q 048729 93 NNINTR-------LDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL----------------S-L----FP---------- 134 (330)
Q Consensus 93 ~~l~~~-------~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~----------------~-~----~~---------- 134 (330)
++++.. ...+.+.++++..++++++++......+.... . . ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TS 161 (525)
T PRK05851 82 SILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSVTVHDLATAAHTNRSASLTPPDSGGPAVLQGTA 161 (525)
T ss_pred cCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcccccccccccccccccccCCCCCCCCeEEEEeCC
Confidence 543321 12244556788888888888654332211000 0 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 162 GTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i 241 (525)
T PRK05851 162 GSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWL 241 (525)
T ss_pred CCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHH
Confidence
Q ss_pred ----------------------------------------------hHHHH-----------------------------
Q 048729 135 ----------------------------------------------QRARL----------------------------- 139 (330)
Q Consensus 135 ----------------------------------------------~~~~~----------------------------- 139 (330)
....+
T Consensus 242 ~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~ 321 (525)
T PRK05851 242 SDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTV 321 (525)
T ss_pred HHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEe
Confidence 00000
Q ss_pred ----------------------hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc
Q 048729 140 ----------------------KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS 197 (330)
Q Consensus 140 ----------------------~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 197 (330)
..++|.|++|. +++|+|++.+.+++.+ +.|||+++|++++.||+++++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~----- 393 (525)
T PRK05851 322 PVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGAAGVAGR--EIGEIEIRGASMMSGYLGQAPID----- 393 (525)
T ss_pred cCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCCccCCCC--CeEEEEEecCchhhccccCCccC-----
Confidence 01234444453 5555665333456666 78999999999999999988643
Q ss_pred CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCccc
Q 048729 198 DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL 277 (330)
Q Consensus 198 ~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 277 (330)
.+|||+|||+++++ +|.++|+||.||+||++|++|+|.+||++|.+||+|.+++|++.+++..++.+.++++.....
T Consensus 394 ~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~-- 470 (525)
T PRK05851 394 PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRG-- 470 (525)
T ss_pred CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecC--
Confidence 37899999999997 799999999999999999999999999999999999999999998877777776666544211
Q ss_pred CCCCCHHHHHHHHHhcCCCC--CCCceEEEcc--CCCCCCCCcccHHHHHHHhhh
Q 048729 278 TKKPTEKEIIEYCRARLPRY--MVPRKVVFSE--ELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 278 ~~~~~~~~l~~~l~~~l~~~--~~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+.+++.+.++++++.+ ++|..+++++ +||+|++||++|++|++.+++
T Consensus 471 ---~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 471 ---PDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred ---cchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 33456677777777776 8999999998 899999999999999998865
No 88
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-41 Score=316.22 Aligned_cols=305 Identities=23% Similarity=0.321 Sum_probs=247.9
Q ss_pred HHHHH-HHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec
Q 048729 17 TLGFL-ERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 95 (330)
Q Consensus 17 ~~~~l-~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l 95 (330)
+.+.+ ...++.+|+++|+.+.++.+||+||.+.++++|.+|.+.|+++||+|++++++++++++.++||+++|++++|+
T Consensus 4 ~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 4 FSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred hhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 33433 45588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccchHHH--HHH---------hccC-----c-------------------------
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHTYLL--LEA---------LSLF-----P------------------------- 134 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~--~~~---------~~~~-----~------------------------- 134 (330)
++.++++++..++++.+++++++........ ... .... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~ 163 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGENTFSALTSLHLQLVEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLAS 163 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccchhhccccccccccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHH
Confidence 9999999999999999999998765331100 000 0000 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~~~~~~~i~~~t~~~~~P~~~~~l~~~~~~~~~l~ 243 (458)
T PRK09029 164 AEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDKQPLEQALAGCTHASLVPTQLWRLLDNRSEPLSLK 243 (458)
T ss_pred HHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCChHHHHHHHhhceeeecChHHHHHHHhccccCCcce
Confidence
Q ss_pred -----------hHHHHhhccCC---cccCceeEEEeC---C-----CCCcccCCCCc--eecEEEEecCcccccccCCch
Q 048729 135 -----------QRARLKARQGV---KTVGLAEVDVVN---P-----ETGESVKRDGV--SLGEVVLRGGCVTVGYFKDKE 190 (330)
Q Consensus 135 -----------~~~~~~~~~G~---~~~g~te~~i~d---~-----~~g~~~~~~~~--~~Gel~v~~~~~~~gy~~~~~ 190 (330)
.........|. ..||.||+...- . .-|++++.-.. ..|||+++|+.++.||+++++
T Consensus 244 ~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~G~~~~~~~~~i~~gel~v~g~~~~~gY~~~~~ 323 (458)
T PRK09029 244 AVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEMASTVCAKRADGLAGVGSPLPGREVKLVDGEIWLRGASLALGYWRQGQ 323 (458)
T ss_pred EEEECCCCCCHHHHHHHHHcCCcEeccccccccCcceeccCCCCCCCCCCCCCCCEEEEeCCEEEEecCceeeeeecCcc
Confidence 00000011122 237887764211 1 12334332210 239999999999999999887
Q ss_pred hhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEE
Q 048729 191 ATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVS 270 (330)
Q Consensus 191 ~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 270 (330)
.+..... +|||+|||+|++| +|.+++.||.||+||++|.+|+|.+||+.+.++|+|.+++|++.+++..++.++++++
T Consensus 324 ~~~~~~~-~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~ 401 (458)
T PRK09029 324 LVPLVND-EGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVE 401 (458)
T ss_pred ccccccC-CCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEE
Confidence 7654443 8999999999999 9999999999999999999999999999999999999999999999888889999888
Q ss_pred ecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhhc
Q 048729 271 LKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
...+ .+.+++.++++++|++|++|..+++++++|+|++||++|+.|++++.+.
T Consensus 402 ~~~~------~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 402 SDSE------AAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQ 454 (458)
T ss_pred cCcc------cCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhc
Confidence 6633 5678999999999999999999999999999999999999999998753
No 89
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-41 Score=317.84 Aligned_cols=302 Identities=25% Similarity=0.399 Sum_probs=249.4
Q ss_pred HHHHHhcCCCcEEEe--CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC
Q 048729 22 ERAAAAYTDCPSLVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 99 (330)
Q Consensus 22 ~~~~~~~p~~~a~~~--~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~ 99 (330)
...++.+|+++|+++ .++.+||.||...+.+++++|.+.|+++||+|++++++++++++.++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 457788999999987 578899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEcccchHHHHHH----------------------------hc-----c---C---c------
Q 048729 100 DAHTLSVLLQHSESKLVFVDHLHTYLLLEA----------------------------LS-----L---F---P------ 134 (330)
Q Consensus 100 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----------------------------~~-----~---~---~------ 134 (330)
+.+.+.++++..+++++++++.....+... .. . . .
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TS 163 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPATPIADESLGTDMLYSS 163 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCCCCCCCcccccEEEECC
Confidence 999999999999999998864322111000 00 0 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 164 GtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i 243 (511)
T PRK13391 164 GTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLALI 243 (511)
T ss_pred CCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHHH
Confidence
Q ss_pred -----------------------------------------------hHHHHhhccCC---cccCcee------------
Q 048729 135 -----------------------------------------------QRARLKARQGV---KTVGLAE------------ 152 (330)
Q Consensus 135 -----------------------------------------------~~~~~~~~~G~---~~~g~te------------ 152 (330)
....+....|. ..||.||
T Consensus 244 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~ 323 (511)
T PRK13391 244 EEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEW 323 (511)
T ss_pred HHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccc
Confidence 00000001121 1255555
Q ss_pred --------------EEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCC-CeEEeCceEEEecCceEE
Q 048729 153 --------------VDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDN-GWFYTGDIGVMHADGYVE 217 (330)
Q Consensus 153 --------------~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-g~~~TGD~~~~~~~G~l~ 217 (330)
+.++|+ +|.+++.+ +.|||+++|+ ++.||+++++.+...+..+ +||+|||+++++++|.++
T Consensus 324 ~~~~~~vG~~~~g~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~ 399 (511)
T PRK13391 324 LAHPGTVGRAMFGDLHILDD-DGAELPPG--EPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLY 399 (511)
T ss_pred cccCCCcCCcccceEEEECC-CCCCCCCC--CceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEE
Confidence 344555 67777777 7899999999 8889999998887777544 999999999999999999
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRY 297 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 297 (330)
+.||.||++|++|.+|++.+||+.+.+||.|.++++++..++..++.++++++...+.... ....+++.++++++++.+
T Consensus 400 ~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~ 478 (511)
T PRK13391 400 LTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPG-PALAAELIAFCRQRLSRQ 478 (511)
T ss_pred EeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcc-cchHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999998888788888888876653211 134588999999999999
Q ss_pred CCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 298 MVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 298 ~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+.|..+.+++++|+|++||++|+.|++.+.+
T Consensus 479 ~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 479 KCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred cCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 9999999999999999999999999998864
No 90
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.3e-41 Score=318.37 Aligned_cols=303 Identities=26% Similarity=0.371 Sum_probs=257.1
Q ss_pred HHHHHHHH-HHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec
Q 048729 17 TLGFLERA-AAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 95 (330)
Q Consensus 17 ~~~~l~~~-~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l 95 (330)
..+++.+. ++.+||++|+++.++.+||.||.+.++++|++|.+.|+++||+|+++++|+++++..++||+++|++++|+
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 45566665 57799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-----------------------------------cC-c-----
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS-----------------------------------LF-P----- 134 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-----------------------------------~~-~----- 134 (330)
++.++.+.+.++++..++++++++......+..... .. .
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 165 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESEQFKPAATQADDPAF 165 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCCccCCCCCCCCCcEE
Confidence 999999999999999999999886543321111000 00 0
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 166 i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 245 (508)
T TIGR02262 166 WLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVF 245 (508)
T ss_pred EEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHH
Confidence
Q ss_pred ------------------------------------------------hHHH----------------------------
Q 048729 135 ------------------------------------------------QRAR---------------------------- 138 (330)
Q Consensus 135 ------------------------------------------------~~~~---------------------------- 138 (330)
....
T Consensus 246 ~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~ 325 (508)
T TIGR02262 246 DRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPG 325 (508)
T ss_pred HHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCcc
Confidence 0000
Q ss_pred --HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceE
Q 048729 139 --LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYV 216 (330)
Q Consensus 139 --~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l 216 (330)
...+.|.|++|. +++++|+ ++.+++.+ +.|||+++|++++.||+++++.+...|. ++||+|||+++++++|.+
T Consensus 326 ~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gY~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~ 400 (508)
T TIGR02262 326 DVRYGTSGKPVPGY-RLRLVGD-GGQDVAAG--EPGELLISGPSSATMYWNNRAKTRDTFQ-GEWTRSGDKYVRNDDGSY 400 (508)
T ss_pred CCCCCCcCCCCCCc-EEEEECC-CCCCCCCC--CeeEEEEecCccccccCCCHHHhHhhhh-cCceeccceEEEcCCccE
Confidence 012345566664 7788886 88888888 8899999999999999999998888876 899999999999999999
Q ss_pred EEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCC
Q 048729 217 EIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPR 296 (330)
Q Consensus 217 ~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~ 296 (330)
++.||.+|++|++|.++++.+||+.+.++++|.++++++..+....+++.+++++.++... .....+++.+.++++|++
T Consensus 401 ~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~i~~~~~~~l~~ 479 (508)
T TIGR02262 401 TYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDI-DTALETELKEHVKDRLAP 479 (508)
T ss_pred EEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCcc-ccccHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999998877667788888887765431 114578999999999999
Q ss_pred CCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 297 YMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 297 ~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
++.|..+.+++++|+|++||++|++|+++
T Consensus 480 ~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 480 YKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred CCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 99999999999999999999999998753
No 91
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-41 Score=317.83 Aligned_cols=307 Identities=28% Similarity=0.398 Sum_probs=253.9
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
.+|+.++|.+.++++|+++|+.+.++.+||.||.+.++++|++|.+.|+++||+|+++++|++++++.++||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH--------------------------------------------
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA-------------------------------------------- 129 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------------------------------------------- 129 (330)
++++.++.+.+.++++..++++++++......+...
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSPERDFGER 161 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCCcCCCCCC
Confidence 999999999999999999999988754321111000
Q ss_pred -------------------------------------h--------ccC-------c-----------------------
Q 048729 130 -------------------------------------L--------SLF-------P----------------------- 134 (330)
Q Consensus 130 -------------------------------------~--------~~~-------~----------------------- 134 (330)
. ... .
T Consensus 162 ~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l 241 (533)
T PRK07798 162 SPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAAL 241 (533)
T ss_pred CCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHH
Confidence 0 000 0
Q ss_pred ----------------------------------------------------------------------hHHHHhhcc-
Q 048729 135 ----------------------------------------------------------------------QRARLKARQ- 143 (330)
Q Consensus 135 ----------------------------------------------------------------------~~~~~~~~~- 143 (330)
....+....
T Consensus 242 ~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~ 321 (533)
T PRK07798 242 FSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELLP 321 (533)
T ss_pred hcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHcC
Confidence 000000001
Q ss_pred CC---cccCcee--------------------------EEEeCCCCCcccCCCCcee--cEEEEecCcccccccCCchhh
Q 048729 144 GV---KTVGLAE--------------------------VDVVNPETGESVKRDGVSL--GEVVLRGGCVTVGYFKDKEAT 192 (330)
Q Consensus 144 G~---~~~g~te--------------------------~~i~d~~~g~~~~~~~~~~--Gel~v~~~~~~~gy~~~~~~~ 192 (330)
|. ..||.|| +.++++ ++.+++.+ +. |+++ .++.++.||++++..+
T Consensus 322 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~-~~~~~~~g--~~~~g~l~-~~~~~~~gy~~~~~~t 397 (533)
T PRK07798 322 NVVLTDSIGSSETGFGGSGTVAKGAVHTGGPRFTIGPRTVVLDE-DGNPVEPG--SGEIGWIA-RRGHIPLGYYKDPEKT 397 (533)
T ss_pred CCeEEeeecccccccccccCCCCCCccCCCCccCCCceEEEECC-CCCCCCCC--CCCeeEEE-eecCccccccCChhhh
Confidence 22 2255555 333444 55566655 44 6665 5568999999999888
Q ss_pred hccccC---CCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEE
Q 048729 193 RRCISD---NGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFV 269 (330)
Q Consensus 193 ~~~~~~---~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 269 (330)
.+.|.. ++||+|||++++|++|.+++.||.||++|++|++|++.+||+.+.++|+|.++++++..++..++.+.+++
T Consensus 398 ~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 477 (533)
T PRK07798 398 AETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVV 477 (533)
T ss_pred HHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEE
Confidence 777642 35999999999999999999999999999999999999999999999999999999998877778888888
Q ss_pred EecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 270 SLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
++.++.. .+.+++.++++++|+.|.+|..+++++++|+|++||++|+.|++++.+
T Consensus 478 ~~~~~~~----~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 478 QLREGAR----PDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred EECCCCC----CCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 8877654 578999999999999999999999999999999999999999998864
No 92
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-41 Score=317.36 Aligned_cols=289 Identities=27% Similarity=0.363 Sum_probs=244.2
Q ss_pred HHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHH
Q 048729 24 AAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHT 103 (330)
Q Consensus 24 ~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~ 103 (330)
.+...++++|+.+.++++||+||.++++++|..|. ++|+|++++++++++++.++||+++|++++|+++.++.++
T Consensus 9 ~~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~ 83 (471)
T PRK07787 9 VAAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAE 83 (471)
T ss_pred hhcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHH
Confidence 45667999999999999999999999999999995 5799999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcEEEEcccchH-H----------------------------------------------HHHHh----c-
Q 048729 104 LSVLLQHSESKLVFVDHLHTY-L----------------------------------------------LLEAL----S- 131 (330)
Q Consensus 104 l~~~l~~~~~~~i~~~~~~~~-~----------------------------------------------~~~~~----~- 131 (330)
+.+++++.+++++++++.... . +.... .
T Consensus 84 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~ 163 (471)
T PRK07787 84 RRHILADSGAQAWLGPAPDDPAGLPHVPVRLHARSWHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA 163 (471)
T ss_pred HHHHHHhcCCCEEEecCCcccccccceeeeccccccccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh
Confidence 999999999999988642100 0 00000 0
Q ss_pred -----------cCc------------------------------------------------------------------
Q 048729 132 -----------LFP------------------------------------------------------------------ 134 (330)
Q Consensus 132 -----------~~~------------------------------------------------------------------ 134 (330)
..+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~t~~~~~P~~~~~l~~~~~~~~~l~~l 243 (471)
T PRK07787 164 WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALSEGGTLYFGVPTVWSRIAADPEAARALRGA 243 (471)
T ss_pred cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHhhCceEEEcchHHHHHHHhCccccccccce
Confidence 000
Q ss_pred -------------hH------------------------------HHHhhccCCcccCceeEEEeCCCCCcccCCCCcee
Q 048729 135 -------------QR------------------------------ARLKARQGVKTVGLAEVDVVNPETGESVKRDGVSL 171 (330)
Q Consensus 135 -------------~~------------------------------~~~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~ 171 (330)
.. .....++|.++.|. +++|+|+ ++.+++..+...
T Consensus 244 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~-~~~i~d~-~~~~~~~~~~~~ 321 (471)
T PRK07787 244 RLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRADGERRPGWVGLPLAGV-ETRLVDE-DGGPVPHDGETV 321 (471)
T ss_pred eEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCCCcccCCcccccCCCc-EEEEECC-CCCCCCCCCCCc
Confidence 00 00112356666774 7888887 677776432247
Q ss_pred cEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecC-CCeEEeCCeecCHHHHHHHHhcCcCcce
Q 048729 172 GEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRS-KDVIISGGENICSAEVESVLYSITAVNE 250 (330)
Q Consensus 172 Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~-dd~ik~~G~~v~~~~iE~~l~~~~~v~~ 250 (330)
|||+++|++++.||+++++.+.+.|..+|||+|||++++|+||.+++.||. |+++|++|++|++.+||+.|..++.|.+
T Consensus 322 Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~ 401 (471)
T PRK07787 322 GELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVRE 401 (471)
T ss_pred eEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcce
Confidence 999999999999999999999988887899999999999999999999996 8999999999999999999999999999
Q ss_pred EEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 251 AAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 251 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
++|++.++...++.++++++.... .+.+++.+.++++|++++.|..++++++||+|++||++|++|+++
T Consensus 402 ~~v~~~~~~~~~~~~~a~v~~~~~------~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 402 AAVVGVPDDDLGQRIVAYVVGADD------VAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred EEEEcccccccCeEEEEEEEeCCC------CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 999999888778899999887332 567899999999999999999999999999999999999999764
No 93
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-41 Score=338.06 Aligned_cols=298 Identities=18% Similarity=0.199 Sum_probs=241.3
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
....++.++|.++++.+||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH--------------------------------Hh---------
Q 048729 92 LNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE--------------------------------AL--------- 130 (330)
Q Consensus 92 ~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~--------------------------------~~--------- 130 (330)
++|+++. .++.++++..+++++++++.....+.. ..
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPGWYRP 600 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccCCcccCC
Confidence 9999984 678899999999999987543221100 00
Q ss_pred c-----cC--------c---------------------------------------------------------------
Q 048729 131 S-----LF--------P--------------------------------------------------------------- 134 (330)
Q Consensus 131 ~-----~~--------~--------------------------------------------------------------- 134 (330)
. .. .
T Consensus 601 ~~~~~dd~a~IiyTgStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~ 680 (994)
T PRK07868 601 NPGLARDLAFIAFSTAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRG 680 (994)
T ss_pred CCCCCCccEEEEEeCCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCC
Confidence 0 00 0
Q ss_pred --------------------------------------------------------h-HHH-------------------
Q 048729 135 --------------------------------------------------------Q-RAR------------------- 138 (330)
Q Consensus 135 --------------------------------------------------------~-~~~------------------- 138 (330)
. ...
T Consensus 681 ~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~ 760 (994)
T PRK07868 681 LDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIGSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVL 760 (994)
T ss_pred CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEecCCCCHHHHHHHHHHhCchheeeeeecccccccc
Confidence 0 000
Q ss_pred ------HhhccCCcccCceeEEEe-----------CCCCC--cccCCCCceecEEEEecCcccccccCCchhh--hcccc
Q 048729 139 ------LKARQGVKTVGLAEVDVV-----------NPETG--ESVKRDGVSLGEVVLRGGCVTVGYFKDKEAT--RRCIS 197 (330)
Q Consensus 139 ------~~~~~G~~~~g~te~~i~-----------d~~~g--~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~--~~~~~ 197 (330)
...++|+|++|..+++|. ++ +| +.++.+ +.|||+++++. |+ +|+.+ ...|.
T Consensus 761 ~~~~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~-~G~~~~~~~g--e~Gel~~~~~~----~~-~p~~t~~~~~~~ 832 (994)
T PRK07868 761 ANVSGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDD-RGFVRRAEVN--EVGVLLARARG----PI-DPTASVKRGVFA 832 (994)
T ss_pred cccCCCCCcccCCccCCCCceeEEEecCcCCceeecC-CceEEEcCCC--CceEEEEecCC----CC-ChhhhhHhcccc
Confidence 012456666663234332 22 34 345555 78999999874 33 34332 22232
Q ss_pred -CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc
Q 048729 198 -DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE 276 (330)
Q Consensus 198 -~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 276 (330)
.+|||+|||+|++|+||+++|+||.||+||++|.+|+|.+||+.|.+||+|.+++|++.+++. ++.++++|++.++..
T Consensus 833 ~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~ 911 (994)
T PRK07868 833 PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAA 911 (994)
T ss_pred cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCc
Confidence 379999999999999999999999999999999999999999999999999999999998875 578889998887654
Q ss_pred cCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 277 LTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 277 ~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
.+.+++++++++ ++.|++|+.|+++++||+|++||++|++|++..
T Consensus 912 ----~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~ 956 (994)
T PRK07868 912 ----ITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAG 956 (994)
T ss_pred ----CCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcC
Confidence 677899999986 999999999999999999999999999998753
No 94
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=8.3e-41 Score=317.95 Aligned_cols=304 Identities=29% Similarity=0.445 Sum_probs=252.9
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
..++.++|.+.++.+|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|++++++.++||+++|++++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v 99 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVV 99 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEE
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccch--HHH---------------------------------------HH----
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHT--YLL---------------------------------------LE---- 128 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~--~~~---------------------------------------~~---- 128 (330)
|+++..+..++.++++..+++++++++... ..+ ..
T Consensus 100 ~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (541)
T TIGR03205 100 HLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKG 179 (541)
T ss_pred ecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHhc
Confidence 999999999999999999999998753100 000 00
Q ss_pred ----------------------------------------------Hh--------c---cC----c-------------
Q 048729 129 ----------------------------------------------AL--------S---LF----P------------- 134 (330)
Q Consensus 129 ----------------------------------------------~~--------~---~~----~------------- 134 (330)
.. . .. +
T Consensus 180 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 259 (541)
T TIGR03205 180 AAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLR 259 (541)
T ss_pred CCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHH
Confidence 00 0 00 0
Q ss_pred --------------------------------------------------------------------hHHHHhhccCC-
Q 048729 135 --------------------------------------------------------------------QRARLKARQGV- 145 (330)
Q Consensus 135 --------------------------------------------------------------------~~~~~~~~~G~- 145 (330)
....+....|.
T Consensus 260 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~ 339 (541)
T TIGR03205 260 SLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKTGLK 339 (541)
T ss_pred HHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHhCCC
Confidence 00000001111
Q ss_pred --cccCcee---------------------------EEEeC-CCCCcccCCCCceecEEEEecCcccccccCCchhhhcc
Q 048729 146 --KTVGLAE---------------------------VDVVN-PETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRC 195 (330)
Q Consensus 146 --~~~g~te---------------------------~~i~d-~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 195 (330)
..||.|| +++.+ .+++++++.+ +.|||+++|++++.||+++++.+.+.
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~ 417 (541)
T TIGR03205 340 LKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPG--EVGELRIRGPNVTRGYWNRPEESAEA 417 (541)
T ss_pred eecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCC--CeeEEEEecCCccccccCChhhhHhh
Confidence 1244444 33332 1256677766 78999999999999999999988888
Q ss_pred ccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCc
Q 048729 196 ISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDL 275 (330)
Q Consensus 196 ~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 275 (330)
|. ++||+|||+++++++|+++++||.||++|++|++|++.+||+.+.++++|.+++|++..++..++.+.+++++..+.
T Consensus 418 ~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 496 (541)
T TIGR03205 418 FV-GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGA 496 (541)
T ss_pred hc-cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCC
Confidence 77 78999999999999999999999999999999999999999999999999999999998887778888888887653
Q ss_pred ccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHH
Q 048729 276 ELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLR 323 (330)
Q Consensus 276 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~ 323 (330)
.. .+.+++.+.++++|+++.+|..++++++||+|++||++|++|+
T Consensus 497 ~~---~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 497 KP---FSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred Cc---CCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 21 4578999999999999999999999999999999999999874
No 95
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.3e-41 Score=326.65 Aligned_cols=308 Identities=20% Similarity=0.304 Sum_probs=237.7
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeC----C-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHh
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYN----N-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 85 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~ 85 (330)
.|+.++|.+.++.+||++|+.+. + ..+||+||.++++++|++|.+.|+++||+|+++++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999841 1 34899999999999999999999999999999999999999999999
Q ss_pred hhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHH--------------------------------------
Q 048729 86 PMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLL-------------------------------------- 127 (330)
Q Consensus 86 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-------------------------------------- 127 (330)
+++|++++|+++.++++++.++++.+++++++++......+.
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 999999999999999999999999999999998643221110
Q ss_pred HH---hc--c--C----c--------------------------------------------------------------
Q 048729 128 EA---LS--L--F----P-------------------------------------------------------------- 134 (330)
Q Consensus 128 ~~---~~--~--~----~-------------------------------------------------------------- 134 (330)
.. .. . . +
T Consensus 205 ~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 284 (666)
T PLN02614 205 EFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDR 284 (666)
T ss_pred HHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHH
Confidence 00 00 0 0 0
Q ss_pred --------------------------------------------hH----HH----------------------------
Q 048729 135 --------------------------------------------QR----AR---------------------------- 138 (330)
Q Consensus 135 --------------------------------------------~~----~~---------------------------- 138 (330)
.. ..
T Consensus 285 ~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 364 (666)
T PLN02614 285 VIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQS 364 (666)
T ss_pred HHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 00 00
Q ss_pred -------------------Hhh---------------------cc-CC---cccCcee----------------------
Q 048729 139 -------------------LKA---------------------RQ-GV---KTVGLAE---------------------- 152 (330)
Q Consensus 139 -------------------~~~---------------------~~-G~---~~~g~te---------------------- 152 (330)
... .. +. ..||.||
T Consensus 365 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p 444 (666)
T PLN02614 365 HVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPP 444 (666)
T ss_pred CcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCc
Confidence 000 00 11 1256555
Q ss_pred -----EEEeC-CC-CCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCe
Q 048729 153 -----VDVVN-PE-TGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDV 225 (330)
Q Consensus 153 -----~~i~d-~~-~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ 225 (330)
++|+| ++ .+.+++.+ +.|||+++|++++.|||++|+.+.+.|. +|||+|||+|++|+||+++|+||.+|+
T Consensus 445 ~pg~evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TGDlg~~d~dG~l~i~gR~kd~ 521 (666)
T PLN02614 445 VPNVDIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLI-DGWLHTGDVGEWQPNGSMKIIDRKKNI 521 (666)
T ss_pred CCceEEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhc-cCCcccceEEEEcCCCCEEEEEcchhc
Confidence 33333 11 12345444 6799999999999999999999999886 899999999999999999999999999
Q ss_pred EEe-CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc------c--CCC--------CCHHHHHH
Q 048729 226 IIS-GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE------L--TKK--------PTEKEIIE 288 (330)
Q Consensus 226 ik~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~------~--~~~--------~~~~~l~~ 288 (330)
||+ +|++|+|.+||++|.+||+|.+++|++.... ..++|+|++....- . ... ...+.+.+
T Consensus 522 ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 598 (666)
T PLN02614 522 FKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILG 598 (666)
T ss_pred eecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHH
Confidence 995 7999999999999999999999999998632 14778887654310 0 000 01122233
Q ss_pred HH-----HhcCCCCCCCceEEEcc-CC-----CCCCCCcccHHHHHHHhhh
Q 048729 289 YC-----RARLPRYMVPRKVVFSE-EL-----PKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 289 ~l-----~~~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~l~~~~~~ 328 (330)
.+ +++|+.+++++.|.+++ .| ..||++|++|..+.+.|++
T Consensus 599 ~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~ 649 (666)
T PLN02614 599 ELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQS 649 (666)
T ss_pred HHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHH
Confidence 23 35699999999999876 33 4899999999999998864
No 96
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-40 Score=311.96 Aligned_cols=290 Identities=28% Similarity=0.449 Sum_probs=243.9
Q ss_pred cEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhc
Q 048729 32 PSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHS 111 (330)
Q Consensus 32 ~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~ 111 (330)
.++.+.++++||+||.+.+.+++++|.+.|+++||+|+++++|+++++..++||+++|+.++|+++.++.+.+.++++..
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcccchHHHHHH-------------------------------hc-----------------------------
Q 048729 112 ESKLVFVDHLHTYLLLEA-------------------------------LS----------------------------- 131 (330)
Q Consensus 112 ~~~~i~~~~~~~~~~~~~-------------------------------~~----------------------------- 131 (330)
+++++++++.....+... ..
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~ 162 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPDTPIADETAGADMLYSSGTTGRPKGIKRPL 162 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCCCCCCCCCcceEEEECCCCCCCCceEEEcc
Confidence 999998865333221100 00
Q ss_pred -------------------cC--c--------------------------------------------------------
Q 048729 132 -------------------LF--P-------------------------------------------------------- 134 (330)
Q Consensus 132 -------------------~~--~-------------------------------------------------------- 134 (330)
.. .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 242 (502)
T PRK08276 163 PGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVP 242 (502)
T ss_pred CCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehH
Confidence 00 0
Q ss_pred -----------------------------------hHHH-------------------------------HhhccCCccc
Q 048729 135 -----------------------------------QRAR-------------------------------LKARQGVKTV 148 (330)
Q Consensus 135 -----------------------------------~~~~-------------------------------~~~~~G~~~~ 148 (330)
.... ...++|.|+
T Consensus 243 ~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~- 321 (502)
T PRK08276 243 TMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV- 321 (502)
T ss_pred HHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-
Confidence 0000 001233344
Q ss_pred CceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEe
Q 048729 149 GLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIIS 228 (330)
Q Consensus 149 g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~ 228 (330)
+. +++++|+ ++.+++.+ +.|||+++|+.++.||+++++.+...+.++|||+|||+++++++|.+++.||.||++|+
T Consensus 322 ~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~ 397 (502)
T PRK08276 322 LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS 397 (502)
T ss_pred cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe
Confidence 32 5566676 67778777 78999999999999999999999988886799999999999999999999999999999
Q ss_pred CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccC
Q 048729 229 GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEE 308 (330)
Q Consensus 229 ~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~ 308 (330)
+|.+|++.+||..+.++|+|.++++++..++..++.+.++++..++.... ....+++.+.++++++.++.|..++++++
T Consensus 398 ~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~~~~ 476 (502)
T PRK08276 398 GGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAG-DALAAELIAWLRGRLAHYKCPRSIDFEDE 476 (502)
T ss_pred CCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCC-hhhHHHHHHHHHhhccCCCCCcEEEEecC
Confidence 99999999999999999999999999999888888999999987764311 12345899999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHHhh
Q 048729 309 LPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 309 lP~t~~GKv~r~~l~~~~~ 327 (330)
+|+|++||++|++|++.+.
T Consensus 477 lP~t~~GKi~r~~L~~~~~ 495 (502)
T PRK08276 477 LPRTPTGKLYKRRLRDRYW 495 (502)
T ss_pred CCCCcccchhHHHHHHHHH
Confidence 9999999999999999874
No 97
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-40 Score=318.03 Aligned_cols=308 Identities=24% Similarity=0.360 Sum_probs=239.9
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCC---------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHh
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNN---------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 85 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~---------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~ 85 (330)
+++.+.|.+.+..+|+++|+++.+ +++||+||..++.++|++|.+.| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 468899999999999999998632 68999999999999999999999 68999999999999999999999
Q ss_pred hhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhc-----------------------c----Cc-
Q 048729 86 PMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALS-----------------------L----FP- 134 (330)
Q Consensus 86 ~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-----------------------~----~~- 134 (330)
+++|++++|+++ .++.+++.++++..+++++++++.....+..... . ..
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLDSPRGSDARPRDL 159 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccccCCccccCCCCC
Confidence 999999999986 4567899999999999999987654332211000 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 160 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~ 239 (578)
T PRK05850 160 PSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLT 239 (578)
T ss_pred CCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEe
Confidence
Q ss_pred ----------------------------------------------------------------hHHHH---hhccC---
Q 048729 135 ----------------------------------------------------------------QRARL---KARQG--- 144 (330)
Q Consensus 135 ----------------------------------------------------------------~~~~~---~~~~G--- 144 (330)
....+ ....|
T Consensus 240 ~~~~~~~~p~~~~~~i~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 319 (578)
T PRK05850 240 SPVAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRE 319 (578)
T ss_pred CHHHHHHCHHHHHHHHHHcCCeEEeCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCc
Confidence 00000 00001
Q ss_pred ---CcccCcee--------------------------------------------------EEEeCCCCCcccCCCCcee
Q 048729 145 ---VKTVGLAE--------------------------------------------------VDVVNPETGESVKRDGVSL 171 (330)
Q Consensus 145 ---~~~~g~te--------------------------------------------------~~i~d~~~g~~~~~~~~~~ 171 (330)
.+.||.|| ++++|++++.+++.+ +.
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~~~~~~ivd~~~~~~~~~g--~~ 397 (578)
T PRK05850 320 TAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPRSPTVRIVDPDTCIECPAG--TV 397 (578)
T ss_pred ccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCCCCEEEEEcCCCCcCCCCC--CE
Confidence 12255554 345565467778777 88
Q ss_pred cEEEEecCcccccccCCchhhhcccc-----------CCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHH
Q 048729 172 GEVVLRGGCVTVGYFKDKEATRRCIS-----------DNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVES 240 (330)
Q Consensus 172 Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~ 240 (330)
|||+++|++++.||+++++.+.+.|. .+|||+|||+|+++ +|+++++||.+|+||++|++|+|.+||+
T Consensus 398 Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~ 476 (578)
T PRK05850 398 GEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEA 476 (578)
T ss_pred EEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHH
Confidence 99999999999999999999988773 25799999999998 9999999999999999999999999999
Q ss_pred HHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCC--CCHHHHHHHHHhcCCCC--CCCceEEEcc--CCCCCCC
Q 048729 241 VLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKK--PTEKEIIEYCRARLPRY--MVPRKVVFSE--ELPKTST 314 (330)
Q Consensus 241 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~l~~~l~~~l~~~--~~p~~~~~v~--~lP~t~~ 314 (330)
+|.+||.+ ++++++.++. .++.++++++++++...... ....++++.+...+..+ ..|..+++++ +||+|++
T Consensus 477 ~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~ 554 (578)
T PRK05850 477 TIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTS 554 (578)
T ss_pred HHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCC
Confidence 99999985 4778888776 67789999988876432110 02345666665544432 3566666665 8999999
Q ss_pred CcccHHHHHHHhhh
Q 048729 315 GKIQKYLLREFAKS 328 (330)
Q Consensus 315 GKv~r~~l~~~~~~ 328 (330)
||++|++|++.+.+
T Consensus 555 GKi~R~~l~~~~~~ 568 (578)
T PRK05850 555 GKIRRAACVEQYRQ 568 (578)
T ss_pred chHHHHHHHHHHHc
Confidence 99999999999865
No 98
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5.5e-40 Score=310.16 Aligned_cols=288 Identities=26% Similarity=0.405 Sum_probs=246.5
Q ss_pred cEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhc
Q 048729 32 PSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHS 111 (330)
Q Consensus 32 ~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~ 111 (330)
.|+++.++.+||.||.+.++++|++|.+.|+++||+|+++++|++++++.++|++++|++++++++.++.+++.++++..
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcccchHHHHHHh--------------------------------------------------ccCc-------
Q 048729 112 ESKLVFVDHLHTYLLLEAL--------------------------------------------------SLFP------- 134 (330)
Q Consensus 112 ~~~~i~~~~~~~~~~~~~~--------------------------------------------------~~~~------- 134 (330)
++++++++......+.... ....
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred CCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEECCC
Confidence 9999987653332211000 0000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 242 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIERH 242 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHHc
Confidence
Q ss_pred --------------------------------------------hHH-------------------------------HH
Q 048729 135 --------------------------------------------QRA-------------------------------RL 139 (330)
Q Consensus 135 --------------------------------------------~~~-------------------------------~~ 139 (330)
... ..
T Consensus 243 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~ 322 (509)
T PRK12406 243 RITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSH 322 (509)
T ss_pred CCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCccccccc
Confidence 000 00
Q ss_pred hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccc-cccCCchhhhccccCCCeEEeCceEEEecCceEEE
Q 048729 140 KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV-GYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEI 218 (330)
Q Consensus 140 ~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~ 218 (330)
+.++|.+++|. +++++|+ ++++++.+ +.|||+++|++++. ||+++++.+...+. +|||+|||++++|++|.+++
T Consensus 323 ~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~ 397 (509)
T PRK12406 323 PGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEIDR-GGFITSGDVGYLDADGYLFL 397 (509)
T ss_pred CCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccccC-CCCeEEccEEEEcCCceEEE
Confidence 12446666664 7788887 78888887 88999999998765 89999887776655 89999999999999999999
Q ss_pred EecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCC
Q 048729 219 KDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYM 298 (330)
Q Consensus 219 ~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 298 (330)
.||.||++|++|.+|++.+||+.|.++|+|.++++++..+...++.+.+++++.++.. .+.+++++.++++++++.
T Consensus 398 ~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~l~~~l~~~~ 473 (509)
T PRK12406 398 CDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT----LDEADIRAQLKARLAGYK 473 (509)
T ss_pred eecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC----CCHHHHHHHHHHhcccCC
Confidence 9999999999999999999999999999999999999988877788888888876543 577999999999999999
Q ss_pred CCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 299 VPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 299 ~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+|..+++++++|+|++||++|++|++.+..
T Consensus 474 ~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 474 VPKHIEIMAELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred CCcEEEEeccCCCCCccchhHHHHHHHHHh
Confidence 999999999999999999999999998754
No 99
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.3e-40 Score=319.77 Aligned_cols=312 Identities=21% Similarity=0.305 Sum_probs=239.0
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeC-------C--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYN-------N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 83 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~-------~--~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~l 83 (330)
...|+.++|.+.++.+|+++|+... + +.+||+||.++++++|++|.+.|+++||+|+++++|+++|++++|
T Consensus 41 ~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 120 (660)
T PLN02861 41 DIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAME 120 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3458999999999999999999641 1 479999999999999999999999999999999999999999999
Q ss_pred HhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH-----------------------------------
Q 048729 84 GVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE----------------------------------- 128 (330)
Q Consensus 84 a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----------------------------------- 128 (330)
||+++|++++|+++.++.+++.++++..++++++++......+..
T Consensus 121 A~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 200 (660)
T PLN02861 121 ACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFS 200 (660)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEE
Confidence 999999999999999999999999999999999985432211100
Q ss_pred ------Hhc---cC----c-------------------------------------------------------------
Q 048729 129 ------ALS---LF----P------------------------------------------------------------- 134 (330)
Q Consensus 129 ------~~~---~~----~------------------------------------------------------------- 134 (330)
... .. +
T Consensus 201 ~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~ 280 (660)
T PLN02861 201 WEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYD 280 (660)
T ss_pred HHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHH
Confidence 000 00 0
Q ss_pred ---------------------------------------------hHH--------------------------------
Q 048729 135 ---------------------------------------------QRA-------------------------------- 137 (330)
Q Consensus 135 ---------------------------------------------~~~-------------------------------- 137 (330)
...
T Consensus 281 ~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~ 360 (660)
T PLN02861 281 QVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGL 360 (660)
T ss_pred HHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 000
Q ss_pred -------HH-----------h-hc---------------------cC----CcccCceeEEE---eC-C-------CCCc
Q 048729 138 -------RL-----------K-AR---------------------QG----VKTVGLAEVDV---VN-P-------ETGE 162 (330)
Q Consensus 138 -------~~-----------~-~~---------------------~G----~~~~g~te~~i---~d-~-------~~g~ 162 (330)
.. . .+ .| ...||.||+.. .. . .-|.
T Consensus 361 ~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~ 440 (660)
T PLN02861 361 KQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGV 440 (660)
T ss_pred CCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccC
Confidence 00 0 00 02 12377777521 10 0 0122
Q ss_pred ccCC----------------CCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeE
Q 048729 163 SVKR----------------DGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVI 226 (330)
Q Consensus 163 ~~~~----------------~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~i 226 (330)
+++. .....|||+++|++++.|||++|+.+.+.|. +|||+|||+|++|+||+++|.||++|+|
T Consensus 441 p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TGDlg~~d~dG~l~i~GR~kd~I 519 (660)
T PLN02861 441 PMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLI-DGWFHTGDIGEWQPNGAMKIIDRKKNIF 519 (660)
T ss_pred ccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhh-ccCcccCceEEECCCCcEEEEeccccce
Confidence 2220 0014699999999999999999999999886 8999999999999999999999999999
Q ss_pred Ee-CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc-----cC-CCC----------CHHHHHHH
Q 048729 227 IS-GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE-----LT-KKP----------TEKEIIEY 289 (330)
Q Consensus 227 k~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~-~~~----------~~~~l~~~ 289 (330)
|. +|++|+|.+||+.+.+||.|.+++|++.+. ++.++|+|++....- .. ... ....+.+.
T Consensus 520 k~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (660)
T PLN02861 520 KLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDE 596 (660)
T ss_pred EcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHH
Confidence 95 799999999999999999999999999763 357888888763310 00 000 11234444
Q ss_pred HHh-----cCCCCCCCceEEEcc-CC-----CCCCCCcccHHHHHHHhhh
Q 048729 290 CRA-----RLPRYMVPRKVVFSE-EL-----PKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 290 l~~-----~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~l~~~~~~ 328 (330)
+++ .++.++.+..|.+.+ .| .+|+++|++|+.+++.|++
T Consensus 597 ~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02861 597 LNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKD 646 (660)
T ss_pred HHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHH
Confidence 443 488999999988865 46 7999999999999998865
No 100
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-40 Score=314.53 Aligned_cols=303 Identities=23% Similarity=0.330 Sum_probs=243.7
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCC---eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNN---TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~---~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
.++.++|...++.+|+.+++...+ +.+||+||...+.++|++|.+.|+++||+|+++++|++++++.++||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 489999999999998777654332 67999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCC-------HHHHHHHHHhcCCcEEEEcccchHHHHHHhc---------------------cCc---------
Q 048729 92 LNNINTRLD-------AHTLSVLLQHSESKLVFVDHLHTYLLLEALS---------------------LFP--------- 134 (330)
Q Consensus 92 ~~~l~~~~~-------~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~---------------------~~~--------- 134 (330)
++|+++.+. .+++.++++..++++++++......+..... ...
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 180 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVLSHAWFKALPEADVALPRPTPDDIAY 180 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccceeehhhhcccCCCccccCCCCCCCeEE
Confidence 999976433 5789999999999999987655433322110 000
Q ss_pred ----------------------------------------------------------------------h--H------
Q 048729 135 ----------------------------------------------------------------------Q--R------ 136 (330)
Q Consensus 135 ----------------------------------------------------------------------~--~------ 136 (330)
. .
T Consensus 181 i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 260 (579)
T PRK09192 181 LQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPL 260 (579)
T ss_pred EEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHH
Confidence 0 0
Q ss_pred ------------------------H-----------------------------------HHh-----------------
Q 048729 137 ------------------------A-----------------------------------RLK----------------- 140 (330)
Q Consensus 137 ------------------------~-----------------------------------~~~----------------- 140 (330)
. ...
T Consensus 261 ~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~T 340 (579)
T PRK09192 261 QWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLA 340 (579)
T ss_pred HHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccc
Confidence 0 000
Q ss_pred --------------------------------------------hccCCcccCceeEEEeCCCCCcccCCCCceecEEEE
Q 048729 141 --------------------------------------------ARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVL 176 (330)
Q Consensus 141 --------------------------------------------~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v 176 (330)
.++|.+++|. +++|+|+ ++..++.+ +.|||++
T Consensus 341 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~-~v~i~d~-~~~~~~~g--~~Gel~i 416 (579)
T PRK09192 341 EATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGH-EIEIRNE-AGMPLPER--VVGHICV 416 (579)
T ss_pred cceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCc-EEEEECC-CCCCCCCC--CEEEEEe
Confidence 0123333343 4555565 66777766 7899999
Q ss_pred ecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcc--eEEEE
Q 048729 177 RGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVN--EAAVV 254 (330)
Q Consensus 177 ~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~--~~~v~ 254 (330)
+|++++.||+++ +.+...+..+|||+|||++++ ++|+++++||.||+||++|++|+|.+||+.|.+||+|. +++++
T Consensus 417 ~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~ 494 (579)
T PRK09192 417 RGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAF 494 (579)
T ss_pred cCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEE
Confidence 999999999999 556666666899999999999 89999999999999999999999999999999999998 89999
Q ss_pred eecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCC-CCCCCceEEEcc--CCCCCCCCcccHHHHHHHhhh
Q 048729 255 ARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLP-RYMVPRKVVFSE--ELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+..++. ++.+.++++...+.. .+.+++.+.+++.+. .+..|..+.+++ +||+|++||++|++|++++.+
T Consensus 495 ~~~~~~-~~~~~~~v~~~~~~~----~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~ 566 (579)
T PRK09192 495 SIAQEN-GEKIVLLVQCRISDE----ERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLS 566 (579)
T ss_pred EeccCC-CeeEEEEEEecCCCh----HHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHc
Confidence 988875 447777777665433 456888999988874 578888888775 899999999999999998864
No 101
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.5e-40 Score=306.32 Aligned_cols=278 Identities=19% Similarity=0.302 Sum_probs=226.0
Q ss_pred eecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
-|.|+||.+++.++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++..+++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cccchHH------HHH-H--hccCc-------------------------------------------------------
Q 048729 119 DHLHTYL------LLE-A--LSLFP------------------------------------------------------- 134 (330)
Q Consensus 119 ~~~~~~~------~~~-~--~~~~~------------------------------------------------------- 134 (330)
+...... ... . .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~Pl~h~~g~~~~ 178 (452)
T PRK07445 99 LDQLKLSHPPPLPSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQVNSFCVLPLYHVSGLMQF 178 (452)
T ss_pred cCccccccCCCCCccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHhcCCCCceEeccCchhhhhHHHH
Confidence 6532110 000 0 00000
Q ss_pred ------------------------------------------------------------------hHHHHhhccCC---
Q 048729 135 ------------------------------------------------------------------QRARLKARQGV--- 145 (330)
Q Consensus 135 ------------------------------------------------------------------~~~~~~~~~G~--- 145 (330)
...+.....|.
T Consensus 179 ~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~ 258 (452)
T PRK07445 179 MRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLRPQWLAQFRTILLGGAPAWPSLLEQARQLQLRLA 258 (452)
T ss_pred HHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhChhhhhcceEEEECCccCCHHHHHHHHhcCCeEe
Confidence 00000001122
Q ss_pred cccCceeEEE--e--CC--------CCCcccCCCC-----ceecEEEEecCcccccccCCchhhhccccCCCeEEeCceE
Q 048729 146 KTVGLAEVDV--V--NP--------ETGESVKRDG-----VSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIG 208 (330)
Q Consensus 146 ~~~g~te~~i--~--d~--------~~g~~~~~~~-----~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~ 208 (330)
..||.||+.. . .+ ..|++++.-. ++.|||+++|++++.||++++. ..+|||+|||++
T Consensus 259 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~ 332 (452)
T PRK07445 259 PTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPANQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLG 332 (452)
T ss_pred cCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcCCCcceEEEeCCccchhhcCCcc------CCCCEEECCCEE
Confidence 3488888631 1 11 1244444310 1679999999999999997543 237999999999
Q ss_pred EEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHH
Q 048729 209 VMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIE 288 (330)
Q Consensus 209 ~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 288 (330)
++|+||++++.||.||+||++|++|+|.+||+.+.+||+|.+++|++.+++..++.++++++..++. .+.+++++
T Consensus 333 ~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~-----~~~~~l~~ 407 (452)
T PRK07445 333 YLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS-----ISLEELKT 407 (452)
T ss_pred EEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC-----CCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988888999998876552 46789999
Q ss_pred HHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 289 YCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 289 ~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.++++|+.|++|+.++++++||+|++||++|++|++++.+
T Consensus 408 ~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 408 AIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred HHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998864
No 102
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.6e-39 Score=316.39 Aligned_cols=312 Identities=27% Similarity=0.367 Sum_probs=236.0
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeC------------C-----------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYN------------N-----------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSV 70 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~------------~-----------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~ 70 (330)
..|+.++|.+.++.+||++|+... + ..+||+|+.++++++|++|.+.|+++||+|++
T Consensus 57 ~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 57 ATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 358999999999999999999531 1 23899999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHh--------------------
Q 048729 71 VAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEAL-------------------- 130 (330)
Q Consensus 71 ~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-------------------- 130 (330)
+++|+++|++++|||+++|++++|+++.++++++.++++..++++++++......+....
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~ 216 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSD 216 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhh
Confidence 999999999999999999999999999999999999999999999998764433221100
Q ss_pred ---------------------cc--------Cc-----------------------------------------------
Q 048729 131 ---------------------SL--------FP----------------------------------------------- 134 (330)
Q Consensus 131 ---------------------~~--------~~----------------------------------------------- 134 (330)
.. .+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l 296 (696)
T PLN02387 217 SSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYL 296 (696)
T ss_pred hhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEE
Confidence 00 00
Q ss_pred ------------------------------------------------------------------hH--HH--------
Q 048729 135 ------------------------------------------------------------------QR--AR-------- 138 (330)
Q Consensus 135 ------------------------------------------------------------------~~--~~-------- 138 (330)
.. ..
T Consensus 297 ~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~ 376 (696)
T PLN02387 297 AYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLA 376 (696)
T ss_pred EECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHH
Confidence 00 00
Q ss_pred --------------------------------------------------------------H-hhccCCc---ccCcee
Q 048729 139 --------------------------------------------------------------L-KARQGVK---TVGLAE 152 (330)
Q Consensus 139 --------------------------------------------------------------~-~~~~G~~---~~g~te 152 (330)
+ ....|.+ .||.||
T Consensus 377 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TE 456 (696)
T PLN02387 377 KKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhh
Confidence 0 0011222 266666
Q ss_pred E--------------------------EEeC-CCCCcccCCCCceecEEEEecCcccccccCCchhhhcccc--CCC--e
Q 048729 153 V--------------------------DVVN-PETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCIS--DNG--W 201 (330)
Q Consensus 153 ~--------------------------~i~d-~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~g--~ 201 (330)
+ +|+| ++.+..+.......|||+++|++++.|||++|+.+.+.|. ++| |
T Consensus 457 t~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W 536 (696)
T PLN02387 457 TCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRW 536 (696)
T ss_pred cccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCce
Confidence 4 3333 1111111111113599999999999999999999998873 345 9
Q ss_pred EEeCceEEEecCceEEEEecCCCeEEe-CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc----
Q 048729 202 FYTGDIGVMHADGYVEIKDRSKDVIIS-GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE---- 276 (330)
Q Consensus 202 ~~TGD~~~~~~~G~l~~~GR~dd~ik~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---- 276 (330)
|+|||+|++|+||++++.||.+|+||. +|++|+|.+||++|.+||.|.+++|++.+.. ..++++|++....-
T Consensus 537 ~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~~~~~~~~ 613 (696)
T PLN02387 537 FYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SYCVALVVPSQQALEKWA 613 (696)
T ss_pred eecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEEeCHHHHHHHH
Confidence 999999999999999999999999996 6999999999999999999999999987632 25678887754310
Q ss_pred ------cCC-------CCCHHHHHHHH-----HhcCCCCCCCceEEEccCCC------CCCCCcccHHHHHHHhhh
Q 048729 277 ------LTK-------KPTEKEIIEYC-----RARLPRYMVPRKVVFSEELP------KTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 277 ------~~~-------~~~~~~l~~~l-----~~~l~~~~~p~~~~~v~~lP------~t~~GKv~r~~l~~~~~~ 328 (330)
... ....+++.+.+ +.+|+.+++|..|.++++-. .|+++|++|+.+++.|++
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~ 689 (696)
T PLN02387 614 KKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKREQIRKKFKD 689 (696)
T ss_pred HHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhhHHHHHHHHH
Confidence 000 00112222333 34699999999999887533 688899999999999975
No 103
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.1e-39 Score=332.55 Aligned_cols=308 Identities=22% Similarity=0.271 Sum_probs=242.2
Q ss_pred CCCCHHHHHHHHHHhcC-CCcEEEe-CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 13 TPLTTLGFLERAAAAYT-DCPSLVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p-~~~a~~~-~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
...++.+++.+.++++| +++++.+ .++++||+||.++++++|++|.+ |+++||+|+++++|++++++.++||+++|+
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 35678899999999986 5677666 46899999999999999999975 999999999999999999999999999999
Q ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHH---------------------H----------H----H-hc---
Q 048729 91 ILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLL---------------------L----------E----A-LS--- 131 (330)
Q Consensus 91 ~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~---------------------~----------~----~-~~--- 131 (330)
+++++++..+.+++.+++++.+++++++++...... . . . ..
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFPLVYF 787 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCCcccc
Confidence 999999999999999999999999999875332110 0 0 0 00
Q ss_pred --cCc---------------------------------------------------------------------------
Q 048729 132 --LFP--------------------------------------------------------------------------- 134 (330)
Q Consensus 132 --~~~--------------------------------------------------------------------------- 134 (330)
..+
T Consensus 788 ~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 788 CNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 000
Q ss_pred -------------------------------------------------------hHHHHhhccCC---cccCceeEEEe
Q 048729 135 -------------------------------------------------------QRARLKARQGV---KTVGLAEVDVV 156 (330)
Q Consensus 135 -------------------------------------------------------~~~~~~~~~G~---~~~g~te~~i~ 156 (330)
.........|. +.||.||+...
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~ 947 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPV 947 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccce
Confidence 00001111122 34777775321
Q ss_pred ---C-C------CCCcccCC--------C-CceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEE
Q 048729 157 ---N-P------ETGESVKR--------D-GVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVE 217 (330)
Q Consensus 157 ---d-~------~~g~~~~~--------~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~ 217 (330)
+ + .-|++.+. . .++.|||+++|++++.||+++++........+|||+|||++++|+||+++
T Consensus 948 ~~~~~~~~~~~~~vG~p~~g~~~~~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~ 1027 (1140)
T PRK06814 948 IALNTPMHNKAGTVGRLLPGIEYRLEPVPGIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFIT 1027 (1140)
T ss_pred EEecCCCCCCCCcCCccCCCCeEEEeecCCCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEE
Confidence 1 0 01222221 0 01569999999999999998765332222238999999999999999999
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhc-CCC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRAR-LPR 296 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~-l~~ 296 (330)
+.||.||++|++|++|+|.+||+.+.+++++.+++|++.+++..++++++++. +.. .+.+++.+.++++ +++
T Consensus 1028 ~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~----~~~~~l~~~~~~~~l~~ 1100 (1140)
T PRK06814 1028 IKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASD----ATRAAFLAHAKAAGASE 1100 (1140)
T ss_pred EEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCC----cCHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999998887888776654 112 4678899999874 999
Q ss_pred CCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 297 YMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 297 ~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
+++|..+++++++|+|++||+||++|++++++
T Consensus 1101 ~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1101 LMVPAEIITIDEIPLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred ccCCcEEEEecCcCCCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999998865
No 104
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.7e-39 Score=312.95 Aligned_cols=315 Identities=18% Similarity=0.187 Sum_probs=242.1
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcEEEeC-----CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 8 NSANSTPLTTLGFLERAAAAYTDCPSLVYN-----NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~-----~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
.+....+.|+.++|.+.++.+|+++|+++. .+++||+||.+.++++|++|.+.|+++||+|+++++|++++++.+
T Consensus 32 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 32 EPLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CCCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 334455779999999999999999999874 268999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCC-----HHHHHHHHHhcCCcEEEEcccc--hHHH-------------------------HHHh
Q 048729 83 FGVPMSGAILNNINTRLD-----AHTLSVLLQHSESKLVFVDHLH--TYLL-------------------------LEAL 130 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~-----~~~l~~~l~~~~~~~i~~~~~~--~~~~-------------------------~~~~ 130 (330)
|||+++|++++|+++.++ .+++.++++..++++++++... ...+ ....
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALL 191 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHh
Confidence 999999999999999888 7899999999999999986420 0000 0000
Q ss_pred c------------cC-c---------------------------------------------------------------
Q 048729 131 S------------LF-P--------------------------------------------------------------- 134 (330)
Q Consensus 131 ~------------~~-~--------------------------------------------------------------- 134 (330)
. .. .
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 192 ATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred ccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHH
Confidence 0 00 0
Q ss_pred ----------------------------------------------hH--------------------------------
Q 048729 135 ----------------------------------------------QR-------------------------------- 136 (330)
Q Consensus 135 ----------------------------------------------~~-------------------------------- 136 (330)
..
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 00
Q ss_pred HHHhh----ccC-----CcccCceeEEEe----CC------CCCcccC--------CCCceecEEEEecCcccccccCCc
Q 048729 137 ARLKA----RQG-----VKTVGLAEVDVV----NP------ETGESVK--------RDGVSLGEVVLRGGCVTVGYFKDK 189 (330)
Q Consensus 137 ~~~~~----~~G-----~~~~g~te~~i~----d~------~~g~~~~--------~~~~~~Gel~v~~~~~~~gy~~~~ 189 (330)
..+.. ..| ...||.||+..+ +. .-|.+++ .+ ..|||+++|++++.|||++|
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~~--~~GEi~vrg~~v~~GY~~~p 429 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPVG--GKLEVRVKGPNVTPGYWRAP 429 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecCC--CCcEEEEecCccchhhcCCh
Confidence 00000 012 134888886411 10 0133222 23 45899999999999999999
Q ss_pred hhhhccccCCCeEEeCceEEE----ecCceEEEEecCCCeEE-eCCeecC--HHHHHHHHhcCcCcceEEEEeecCCCCC
Q 048729 190 EATRRCISDNGWFYTGDIGVM----HADGYVEIKDRSKDVII-SGGENIC--SAEVESVLYSITAVNEAAVVARPDMFWG 262 (330)
Q Consensus 190 ~~~~~~~~~~g~~~TGD~~~~----~~~G~l~~~GR~dd~ik-~~G~~v~--~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 262 (330)
+.+.+.|..+|||+|||+|++ |++|+++|+||.+|++| .+|++++ +.++|..+.+||.|.+++|++.+++
T Consensus 430 ~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~--- 506 (614)
T PRK08180 430 ELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRD--- 506 (614)
T ss_pred hHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCC---
Confidence 999988877899999999999 46899999999999888 6798777 7788889899999999999998875
Q ss_pred ceeEEEEEecCCccc-----------CCCCCHHHHHHHHHhcCCCCC--------CCceEEEccCCCCC------CCCcc
Q 048729 263 EIPCAFVSLKRDLEL-----------TKKPTEKEIIEYCRARLPRYM--------VPRKVVFSEELPKT------STGKI 317 (330)
Q Consensus 263 ~~~~~~v~~~~~~~~-----------~~~~~~~~l~~~l~~~l~~~~--------~p~~~~~v~~lP~t------~~GKv 317 (330)
.+.++|++.++... ....+.+++.+.+.++|..++ +|+++++++++|+| ++||+
T Consensus 507 -~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~ 585 (614)
T PRK08180 507 -EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYI 585 (614)
T ss_pred -ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccc
Confidence 46788887654200 000244678888877777666 89999999999876 46688
Q ss_pred cHHHHHHHhhh
Q 048729 318 QKYLLREFAKS 328 (330)
Q Consensus 318 ~r~~l~~~~~~ 328 (330)
+|+++++.|++
T Consensus 586 ~R~~~~~~y~~ 596 (614)
T PRK08180 586 NQRAVLARRAA 596 (614)
T ss_pred cHHHHHHHhHH
Confidence 99999998865
No 105
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-38 Score=311.18 Aligned_cols=309 Identities=22% Similarity=0.313 Sum_probs=233.6
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeC---------------------------CeeecHHHHHHHHHHHHHHHHHcCCCCCC
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYN---------------------------NTTYTWSETHRRCLQVASSLSSVGIQRGH 66 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~---------------------------~~~~T~~el~~~~~~~a~~L~~~g~~~gd 66 (330)
..|+.++|.++++.+||++|+.+. ++.+||+||.++++++|++|.+.|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 458999999999999999999973 47899999999999999999999999999
Q ss_pred EEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHH------------------
Q 048729 67 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLE------------------ 128 (330)
Q Consensus 67 ~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~------------------ 128 (330)
+|+++++|+++|++++|||+++|++++|+++.++++++.++++..++++++++......+..
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~ 227 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSL 227 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999986543221100
Q ss_pred -------------------Hh-------cc----Cc--------------------------------------------
Q 048729 129 -------------------AL-------SL----FP-------------------------------------------- 134 (330)
Q Consensus 129 -------------------~~-------~~----~~-------------------------------------------- 134 (330)
.. .. .+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~ 307 (700)
T PTZ00216 228 PASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPP 307 (700)
T ss_pred ccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCC
Confidence 00 00 00
Q ss_pred ----------------------------------------hH-----------------------HHH------------
Q 048729 135 ----------------------------------------QR-----------------------ARL------------ 139 (330)
Q Consensus 135 ----------------------------------------~~-----------------------~~~------------ 139 (330)
.. ...
T Consensus 308 ~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~ 387 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGSPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVG 387 (700)
T ss_pred CCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECCHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccC
Confidence 00 000
Q ss_pred --------------------------------------h-h----------------------ccC--CcccCcee----
Q 048729 140 --------------------------------------K-A----------------------RQG--VKTVGLAE---- 152 (330)
Q Consensus 140 --------------------------------------~-~----------------------~~G--~~~~g~te---- 152 (330)
. . ..| ...||.||
T Consensus 388 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~~l~~~YG~TEt~~~ 467 (700)
T PTZ00216 388 SLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFGMVIQGWGLTETVCC 467 (700)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhhhHhhccCccccccc
Confidence 0 0 000 01245554
Q ss_pred ----------------------EEEeCCCCCc--ccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceE
Q 048729 153 ----------------------VDVVNPETGE--SVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIG 208 (330)
Q Consensus 153 ----------------------~~i~d~~~g~--~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~ 208 (330)
++|+|. ++. ..+++ ..|||+++|++++.|||++|+.+.+.|..+|||+|||+|
T Consensus 468 ~~~~~~~~~~~~svG~p~~g~evkI~d~-~~~~~~~~~~--~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig 544 (700)
T PTZ00216 468 GGIQRTGDLEPNAVGQLLKGVEMKLLDT-EEYKHTDTPE--PRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVG 544 (700)
T ss_pred ccccCCCCCCCCCcCCcCCCeEEEEeec-hhhccCCCCC--CCceEEEcCCcccchhcCChhHhhhhccccCCeeccceE
Confidence 444443 211 11222 469999999999999999999999999879999999999
Q ss_pred EEecCceEEEEecCCCeEE-eCCeecCHHHHHHHHhcCcCcceE--EEEeecCCCCCceeEEEEEecCCcc--------c
Q 048729 209 VMHADGYVEIKDRSKDVII-SGGENICSAEVESVLYSITAVNEA--AVVARPDMFWGEIPCAFVSLKRDLE--------L 277 (330)
Q Consensus 209 ~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~~~~~~~~~~~v~~~~~~~--------~ 277 (330)
++|+||+++++||.||+|| .+|++|+|.+||+.+.++|.|.++ +|+..++ ...+++++++..... .
T Consensus 545 ~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~---~~~l~a~vv~~~~~~~~~~~~~~~ 621 (700)
T PTZ00216 545 SIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA---RSYICALVLTDEAKAMAFAKEHGI 621 (700)
T ss_pred EEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC---CceEEEEEecCHHHHHHHHHHcCC
Confidence 9999999999999999999 999999999999999999999973 3443332 246778887643210 0
Q ss_pred C----CCC----CHHHHHHHH-----HhcCCCCCCCceEEEcc------CCCCCCCCcccHHHHHHHhhh
Q 048729 278 T----KKP----TEKEIIEYC-----RARLPRYMVPRKVVFSE------ELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 278 ~----~~~----~~~~l~~~l-----~~~l~~~~~p~~~~~v~------~lP~t~~GKv~r~~l~~~~~~ 328 (330)
. ... ..+.+.+.+ ++.+..++++..|.+++ .-..|+++|++|+.+++.|++
T Consensus 622 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 622 EGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYAD 691 (700)
T ss_pred CCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHH
Confidence 0 000 012222322 24688889999988875 344699999999999998865
No 106
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-38 Score=308.55 Aligned_cols=311 Identities=20% Similarity=0.278 Sum_probs=237.0
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeC-----CeeecHHHHHHHHHHHHHHHHH---cCCCCC-----------CEEEEECC
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYN-----NTTYTWSETHRRCLQVASSLSS---VGIQRG-----------HVVSVVAP 73 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~-----~~~~T~~el~~~~~~~a~~L~~---~g~~~g-----------d~V~~~~~ 73 (330)
...|+.++|.+.++.+|+++|+.+. ++.+||+|+.+++.++|++|.+ .|+++| |+|+++++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 3669999999999999999999962 2689999999999999999997 499998 99999999
Q ss_pred CCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHH------------------------
Q 048729 74 NVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEA------------------------ 129 (330)
Q Consensus 74 ~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------------ 129 (330)
|+++|+++++||+++|++++|+++.++++++.++++.+++++++++......+...
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~ 218 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEINI 218 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccc
Confidence 99999999999999999999999999999999999999999999864332211100
Q ss_pred --------------------------------------------------------h-----------------------
Q 048729 130 --------------------------------------------------------L----------------------- 130 (330)
Q Consensus 130 --------------------------------------------------------~----------------------- 130 (330)
.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (746)
T PTZ00342 219 NKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKI 298 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCC
Confidence 0
Q ss_pred -ccCc---------------------------------------------------------------------------
Q 048729 131 -SLFP--------------------------------------------------------------------------- 134 (330)
Q Consensus 131 -~~~~--------------------------------------------------------------------------- 134 (330)
...+
T Consensus 299 ~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~ 378 (746)
T PTZ00342 299 QNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIW 378 (746)
T ss_pred CCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEe
Confidence 0000
Q ss_pred ------------------------------hH-----------HH-----------------------------------
Q 048729 135 ------------------------------QR-----------AR----------------------------------- 138 (330)
Q Consensus 135 ------------------------------~~-----------~~----------------------------------- 138 (330)
.. .+
T Consensus 379 ~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~ 458 (746)
T PTZ00342 379 SKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDK 458 (746)
T ss_pred CCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHh
Confidence 00 00
Q ss_pred ----------------------HhhccCCc---ccCceeEEE---eC-C------CCCccc-----------------CC
Q 048729 139 ----------------------LKARQGVK---TVGLAEVDV---VN-P------ETGESV-----------------KR 166 (330)
Q Consensus 139 ----------------------~~~~~G~~---~~g~te~~i---~d-~------~~g~~~-----------------~~ 166 (330)
+....|.+ .||.||+.- .. + .-|.++ +.
T Consensus 459 lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~ 538 (746)
T PTZ00342 459 VNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKATDT 538 (746)
T ss_pred hCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCCCCcccccCcCCCcEEEEEecccccccCCC
Confidence 00012222 367777521 10 0 012332 11
Q ss_pred CCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEE-eCCeecCHHHHHHHHhcC
Q 048729 167 DGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVII-SGGENICSAEVESVLYSI 245 (330)
Q Consensus 167 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l~~~ 245 (330)
. ..|||+++|++++.|||++|+.+.+.|..||||+|||+|++|+||+++++||.+|+|| .+|++|+|.+||+.+.++
T Consensus 539 ~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~ 616 (746)
T PTZ00342 539 L--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQI 616 (746)
T ss_pred C--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcC
Confidence 1 3599999999999999999999999998899999999999999999999999999999 579999999999999999
Q ss_pred cCcceEEEEeecCCCCCceeEEEEEecCCc----------------ccCC--------CCC----HHHHHHH---H--Hh
Q 048729 246 TAVNEAAVVARPDMFWGEIPCAFVSLKRDL----------------ELTK--------KPT----EKEIIEY---C--RA 292 (330)
Q Consensus 246 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~----------------~~~~--------~~~----~~~l~~~---l--~~ 292 (330)
|.|.+++|++... ...++|+|++.... .... ... .+.+.+. + +.
T Consensus 617 p~V~~~~VvG~~~---~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 693 (746)
T PTZ00342 617 SFINFCVVYGDDS---MDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKT 693 (746)
T ss_pred CCccEEEEEccCC---ccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHh
Confidence 9999999999643 22578888775410 0000 000 1111212 2 23
Q ss_pred cCCCCCCCceEEEcc-CCC----CCCCCcccHHHHHHHhhh
Q 048729 293 RLPRYMVPRKVVFSE-ELP----KTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 293 ~l~~~~~p~~~~~v~-~lP----~t~~GKv~r~~l~~~~~~ 328 (330)
.|+.++++..|.+++ .|. .||+.|++|..+.+.|+.
T Consensus 694 ~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~ 734 (746)
T PTZ00342 694 NLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAF 734 (746)
T ss_pred CCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHH
Confidence 699999999988875 343 899999999999998863
No 107
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.9e-38 Score=302.79 Aligned_cols=312 Identities=22% Similarity=0.309 Sum_probs=234.5
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEeC----C-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Q 048729 13 TPLTTLGFLERAAAAYTDCPSLVYN----N-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 83 (330)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~l 83 (330)
...|+.++|.+.++.+|+++|+... + ..+||+|+.+.++++|++|.+.|+++||+|+++++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4569999999999999999999742 1 247999999999999999999999999999999999999999999
Q ss_pred HhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH-HHH-----------------------------------
Q 048729 84 GVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY-LLL----------------------------------- 127 (330)
Q Consensus 84 a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-~~~----------------------------------- 127 (330)
||+++|++++|+++.++++++.++++..++++++++..... .+.
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYS 199 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEE
Confidence 99999999999999999999999999999999998653211 000
Q ss_pred -----HHhc---c-----Cc------------------------------------------------------------
Q 048729 128 -----EALS---L-----FP------------------------------------------------------------ 134 (330)
Q Consensus 128 -----~~~~---~-----~~------------------------------------------------------------ 134 (330)
.... . .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~ 279 (660)
T PLN02430 200 WIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHIL 279 (660)
T ss_pred HHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHH
Confidence 0000 0 00
Q ss_pred ------------------------------------------------hH---------H--------------------
Q 048729 135 ------------------------------------------------QR---------A-------------------- 137 (330)
Q Consensus 135 ------------------------------------------------~~---------~-------------------- 137 (330)
.. .
T Consensus 280 ~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (660)
T PLN02430 280 DRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRG 359 (660)
T ss_pred HHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0
Q ss_pred ----------H-------------------------------HhhccC-C---cccCceeEEE---eC-C-------CCC
Q 048729 138 ----------R-------------------------------LKARQG-V---KTVGLAEVDV---VN-P-------ETG 161 (330)
Q Consensus 138 ----------~-------------------------------~~~~~G-~---~~~g~te~~i---~d-~-------~~g 161 (330)
. +....| . ..||.||+.. .. + .-|
T Consensus 360 ~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG 439 (660)
T PLN02430 360 YSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVG 439 (660)
T ss_pred CCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCcc
Confidence 0 000011 1 2267776321 00 0 011
Q ss_pred cccC----------------CCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCe
Q 048729 162 ESVK----------------RDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDV 225 (330)
Q Consensus 162 ~~~~----------------~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ 225 (330)
.+++ .+.+..|||+++|++++.|||++|+.+...|. +|||+|||+|++|+||++++.||.+|+
T Consensus 440 ~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~-dGw~~TGDig~~d~dG~l~i~gR~kd~ 518 (660)
T PLN02430 440 APAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMK-DGWFHTGDIGEILPNGVLKIIDRKKNL 518 (660)
T ss_pred CCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhh-ccceeccceEEECCCCcEEEEEccccc
Confidence 1111 01113599999999999999999999998886 999999999999999999999999999
Q ss_pred EEe-CCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcc----------cC--CCCCHHHHH----H
Q 048729 226 IIS-GGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLE----------LT--KKPTEKEII----E 288 (330)
Q Consensus 226 ik~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----------~~--~~~~~~~l~----~ 288 (330)
||. +|++|+|.+||+.+.++|.|.+++|++.. ....++|+|+++...- .. ......+++ +
T Consensus 519 ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 595 (660)
T PLN02430 519 IKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILS 595 (660)
T ss_pred EEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHH
Confidence 995 79999999999999999999999999843 2457888888764310 00 000111122 2
Q ss_pred HH-----HhcCCCCCCCceEEEccC------CCCCCCCcccHHHHHHHhhh
Q 048729 289 YC-----RARLPRYMVPRKVVFSEE------LPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 289 ~l-----~~~l~~~~~p~~~~~v~~------lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+ +.+|+.++++..|.+.++ -..|+++|++|+.+.+.|++
T Consensus 596 ~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~ 646 (660)
T PLN02430 596 ELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQV 646 (660)
T ss_pred HHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHH
Confidence 22 235999999999888663 35899999999999998864
No 108
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=5.5e-38 Score=278.77 Aligned_cols=311 Identities=27% Similarity=0.350 Sum_probs=263.4
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcEEEeCC--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 11 NSTPLTTLGFLERAAAAYTDCPSLVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~p~~~a~~~~~--~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
.....|+.++|.++++++|+++|+++.+ +++||+|+...++++|++|+..|++.||.|+++++|.++++..||++.++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 3457899999999999999999999977 79999999999999999999999999999999999999999999999999
Q ss_pred CcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhccCc----------------------------------
Q 048729 89 GAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSLFP---------------------------------- 134 (330)
Q Consensus 89 G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---------------------------------- 134 (330)
|++...++.+...+.+.|-++.++++.+++++++...+.+......
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp 232 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVP 232 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCC
Confidence 9999999999999999999999999999999998877766532221
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 233 ~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~ 312 (649)
T KOG1179|consen 233 VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATV 312 (649)
T ss_pred cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceE
Confidence
Q ss_pred ----------------------------------------------------------hHHHHhhccCCc----ccCcee
Q 048729 135 ----------------------------------------------------------QRARLKARQGVK----TVGLAE 152 (330)
Q Consensus 135 ----------------------------------------------------------~~~~~~~~~G~~----~~g~te 152 (330)
.+..+....|.+ +||.||
T Consensus 313 VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RFg~~~IgE~YgaTE 392 (649)
T KOG1179|consen 313 VLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRFGIIKIGEFYGATE 392 (649)
T ss_pred EEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHcCCCeEEEEecccc
Confidence 556666666655 488877
Q ss_pred E---------------------------EE--eCCCCCcccCC--------CCceecEEEEe--cCc---ccccccCCch
Q 048729 153 V---------------------------DV--VNPETGESVKR--------DGVSLGEVVLR--GGC---VTVGYFKDKE 190 (330)
Q Consensus 153 ~---------------------------~i--~d~~~g~~~~~--------~~~~~Gel~v~--~~~---~~~gy~~~~~ 190 (330)
- ++ +|+++|+++.. ..+|+|.++-+ -.. -+.||.+...
T Consensus 393 gn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~ 472 (649)
T KOG1179|consen 393 GNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKK 472 (649)
T ss_pred CcceeeeecCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchh
Confidence 2 11 35556655543 23378866543 223 3889999777
Q ss_pred hhhccc------cCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCce
Q 048729 191 ATRRCI------SDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEI 264 (330)
Q Consensus 191 ~~~~~~------~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 264 (330)
.+++.. ..|-||.|||+..+|+.|++||.+|.+|.+.+.|++|+..|+|++|....++.|+.|+|+.-+....|
T Consensus 473 ~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGR 552 (649)
T KOG1179|consen 473 ATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGR 552 (649)
T ss_pred hhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEEEecCCccCc
Confidence 666544 23569999999999999999999999999999999999999999999999999999999988866555
Q ss_pred e-EEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHH
Q 048729 265 P-CAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 265 ~-~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~ 325 (330)
. .|.|+..+... .+.+.+-+.+++.||.|++|..+.+.+++++|.+=|..+..|.+.
T Consensus 553 aGMAaI~~~p~~~----~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 553 AGMAAIVLDPTTE----KDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred cceEEEEecCccc----chHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 4 45565566655 889999999999999999999999999999999999999998875
No 109
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-38 Score=304.03 Aligned_cols=314 Identities=18% Similarity=0.201 Sum_probs=234.2
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcEEEeCC------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Q 048729 9 SANSTPLTTLGFLERAAAAYTDCPSLVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 82 (330)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~ 82 (330)
+......++.++|.+.++.+||++|+++.+ +++||+||.+.++++|++|.+.|+++||+|+++++|++++++++
T Consensus 43 ~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 122 (624)
T PRK12582 43 PLGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMT 122 (624)
T ss_pred CCCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 334457789999999999999999998743 68999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcEEeecCCCCCH-----HHHHHHHHhcCCcEEEEcccc-hH-----------------------------HHH
Q 048729 83 FGVPMSGAILNNINTRLDA-----HTLSVLLQHSESKLVFVDHLH-TY-----------------------------LLL 127 (330)
Q Consensus 83 la~~~~G~~~~~l~~~~~~-----~~l~~~l~~~~~~~i~~~~~~-~~-----------------------------~~~ 127 (330)
|||+++|++++|+++.++. +++.++++..++++++++... .. .+.
T Consensus 123 lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 202 (624)
T PRK12582 123 LAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLA 202 (624)
T ss_pred HHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHh
Confidence 9999999999999998874 899999999999999886420 00 000
Q ss_pred HHh---------ccC-c---------------------------------------------------------------
Q 048729 128 EAL---------SLF-P--------------------------------------------------------------- 134 (330)
Q Consensus 128 ~~~---------~~~-~--------------------------------------------------------------- 134 (330)
... ... .
T Consensus 203 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~ 282 (624)
T PRK12582 203 ATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNAN 282 (624)
T ss_pred hcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHH
Confidence 000 000 0
Q ss_pred -----------------------------------------------hHH------------------------------
Q 048729 135 -----------------------------------------------QRA------------------------------ 137 (330)
Q Consensus 135 -----------------------------------------------~~~------------------------------ 137 (330)
...
T Consensus 283 ~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~ 362 (624)
T PRK12582 283 FNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDL 362 (624)
T ss_pred HHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHH
Confidence 000
Q ss_pred -HHhhc-----cC-----CcccCceeEEEeC----C------CCCcccC--------CCCceecEEEEecCcccccccCC
Q 048729 138 -RLKAR-----QG-----VKTVGLAEVDVVN----P------ETGESVK--------RDGVSLGEVVLRGGCVTVGYFKD 188 (330)
Q Consensus 138 -~~~~~-----~G-----~~~~g~te~~i~d----~------~~g~~~~--------~~~~~~Gel~v~~~~~~~gy~~~ 188 (330)
+.... .| ...||+||+..+- . .-|++++ .+ +.|||+++|++++.|||++
T Consensus 363 ~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~~G--~~GEl~vrg~~v~~GY~~~ 440 (624)
T PRK12582 363 YERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAPVG--DKYEVRVKGPNVTPGYHKD 440 (624)
T ss_pred HHHHHHHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEccCC--CceEEEEECCcccccccCC
Confidence 00000 11 2348888864211 0 1233332 34 6799999999999999999
Q ss_pred chhhhccccCCCeEEeCceEEE-e---cCceEEEEecCCCeEE-eCCeecCHHHHH--HHHhcCcCcceEEEEeecCCCC
Q 048729 189 KEATRRCISDNGWFYTGDIGVM-H---ADGYVEIKDRSKDVII-SGGENICSAEVE--SVLYSITAVNEAAVVARPDMFW 261 (330)
Q Consensus 189 ~~~~~~~~~~~g~~~TGD~~~~-~---~~G~l~~~GR~dd~ik-~~G~~v~~~~iE--~~l~~~~~v~~~~v~~~~~~~~ 261 (330)
|+.+.+.|..+|||+|||+|++ | ++|+++++||.+|++| .+|++|++.+|| .++.+||.|.+++|++.+++.
T Consensus 441 p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~- 519 (624)
T PRK12582 441 PELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAF- 519 (624)
T ss_pred ccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCc-
Confidence 9999988877999999999998 4 4699999999999999 579999999885 678899999999999987764
Q ss_pred CceeEEEEEecCCc------cc----CCCCCHHHHHHHHHhcC-------CCCC-CCceEEEccCCCC------CCCCcc
Q 048729 262 GEIPCAFVSLKRDL------EL----TKKPTEKEIIEYCRARL-------PRYM-VPRKVVFSEELPK------TSTGKI 317 (330)
Q Consensus 262 ~~~~~~~v~~~~~~------~~----~~~~~~~~l~~~l~~~l-------~~~~-~p~~~~~v~~lP~------t~~GKv 317 (330)
..++|++.... .. ......+++.+.++.++ +.+. +|.++.+++++|+ |++||+
T Consensus 520 ---~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~ 596 (624)
T PRK12582 520 ---IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYI 596 (624)
T ss_pred ---EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccc
Confidence 33444332111 00 00012345555555554 4444 9999999998774 678889
Q ss_pred cHHHHHHHhhh
Q 048729 318 QKYLLREFAKS 328 (330)
Q Consensus 318 ~r~~l~~~~~~ 328 (330)
+|+.+.+.|++
T Consensus 597 ~R~~~~~~y~~ 607 (624)
T PRK12582 597 NQRAVLERRAA 607 (624)
T ss_pred cHHHHHHHHHH
Confidence 99999888864
No 110
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.4e-37 Score=288.12 Aligned_cols=274 Identities=31% Similarity=0.527 Sum_probs=220.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 42 TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 42 T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
||+||.+.++++|+.|.+.|+++||+|+++++|++++++.++||+++|++++++++.++.+.+.++++..+++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred chHH------HHHHh----------ccC----c-----------------------------------------------
Q 048729 122 HTYL------LLEAL----------SLF----P----------------------------------------------- 134 (330)
Q Consensus 122 ~~~~------~~~~~----------~~~----~----------------------------------------------- 134 (330)
.... +.... ... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 160 (436)
T TIGR01923 81 LEEKDFQADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLP 160 (436)
T ss_pred ccccceeecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccC
Confidence 3210 00000 000 0
Q ss_pred -------------------------------------------------------------------------hHHHHhh
Q 048729 135 -------------------------------------------------------------------------QRARLKA 141 (330)
Q Consensus 135 -------------------------------------------------------------------------~~~~~~~ 141 (330)
...+...
T Consensus 161 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~l~~~~~~G~~~~~~~~~~~~ 240 (436)
T TIGR01923 161 LYHISGLSILFRWLIEGATLRIVDKFNQLLEMIANERVTHISLVPTQLNRLLDEGGHNENLRKILLGGSAIPAPLIEEAQ 240 (436)
T ss_pred cHhHHHHHHHHHHHhcCceEEecchHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCCCceEEEEECCCCCCHHHHHHHH
Confidence 0000001
Q ss_pred ccCC---cccCceeEEEeC----C-------CCCcccCC--------CCceecEEEEecCcccccccCCchhhhccccCC
Q 048729 142 RQGV---KTVGLAEVDVVN----P-------ETGESVKR--------DGVSLGEVVLRGGCVTVGYFKDKEATRRCISDN 199 (330)
Q Consensus 142 ~~G~---~~~g~te~~i~d----~-------~~g~~~~~--------~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 199 (330)
..|. ..||.||....- . ..|.+++. +..+.|||+++|+.++.||+++++.+...+. +
T Consensus 241 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~ 319 (436)
T TIGR01923 241 QYGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNKEGHGEIMVKGANLMKGYLYQGELTPAFEQ-Q 319 (436)
T ss_pred HhCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCCCCceEEEEECCccchhhCCChhhhhhhhc-C
Confidence 1122 237777753210 0 02222221 1114599999999999999997777665554 7
Q ss_pred CeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC
Q 048729 200 GWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK 279 (330)
Q Consensus 200 g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 279 (330)
|||+|||+++++++|.+++.||.||++|++|.+|++.+||+.+.++|.|.++++++.+++..+..+.+++...++
T Consensus 320 ~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~----- 394 (436)
T TIGR01923 320 GWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD----- 394 (436)
T ss_pred CCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC-----
Confidence 999999999999999999999999999999999999999999999999999999999877667778888877654
Q ss_pred CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHH
Q 048729 280 KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLL 322 (330)
Q Consensus 280 ~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l 322 (330)
.+..++.+.+++.++.+.+|..++++++||+|++||++|++|
T Consensus 395 -~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 395 -ISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred -CCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 567899999999999999999999999999999999999865
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-36 Score=289.72 Aligned_cols=304 Identities=24% Similarity=0.268 Sum_probs=230.2
Q ss_pred CHHHHHHHHHHhcCCCcEEEeC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 16 TTLGFLERAAAAYTDCPSLVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~--~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
++.+.|...+...|+.+++.+. ++.+||.||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 5788888999999999999764 46899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHH-------HHHHHHhcCCcEEEEcccchHHHHHHh-------------c-------cCc------------
Q 048729 94 NINTRLDAHT-------LSVLLQHSESKLVFVDHLHTYLLLEAL-------------S-------LFP------------ 134 (330)
Q Consensus 94 ~l~~~~~~~~-------l~~~l~~~~~~~i~~~~~~~~~~~~~~-------------~-------~~~------------ 134 (330)
++++..+.++ +.++++..+++.++++........... . ...
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~i~~TSG 162 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVLTVADLLAADPIDPVETGEDDLALMQLTSG 162 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCceeehhhhcccCCCCcCCCCCCCEEEEEeCCC
Confidence 9988766543 345677778888887653321110000 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 163 tTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i 242 (545)
T PRK07768 163 STGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELI 242 (545)
T ss_pred CCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHH
Confidence
Q ss_pred -------------------------------------------------hHHHH--------------------------
Q 048729 135 -------------------------------------------------QRARL-------------------------- 139 (330)
Q Consensus 135 -------------------------------------------------~~~~~-------------------------- 139 (330)
....+
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~ 322 (545)
T PRK07768 243 SKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLA 322 (545)
T ss_pred HHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceE
Confidence 00000
Q ss_pred ------------------------------------hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccc
Q 048729 140 ------------------------------------KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 183 (330)
Q Consensus 140 ------------------------------------~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~ 183 (330)
..+.|.|++|. +++++|+ +|++++.+ +.|||+++|+.++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~ 398 (545)
T PRK07768 323 VSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGL-EVRVVDE-DGQVLPPR--GVGVIELRGESVTP 398 (545)
T ss_pred EEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCC-EEEEECC-CCCCCCCC--CEEEEEEccCcccc
Confidence 00233444454 5666775 67888777 78999999999999
Q ss_pred cccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeec--CCCC
Q 048729 184 GYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARP--DMFW 261 (330)
Q Consensus 184 gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~--~~~~ 261 (330)
||++.+...... ..+|||+|||++++|++|.++++||.||++|++|++|++.+||+.+.++|+|.++.|++.. +...
T Consensus 399 gy~~~~~~~~~~-~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~ 477 (545)
T PRK07768 399 GYLTMDGFIPAQ-DADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHS 477 (545)
T ss_pred cccCCCCCcccc-cCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCC
Confidence 999865544333 3378999999999999999999999999999999999999999999999999998777654 3333
Q ss_pred CceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCC--CCCceEEEcc--CCCCCCCCcccHHHHHHHhh
Q 048729 262 GEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRY--MVPRKVVFSE--ELPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~v~--~lP~t~~GKv~r~~l~~~~~ 327 (330)
++.+.++++...... .....++.+.+++.+... ..|..+.+++ +||+|++||++|+.|++.|.
T Consensus 478 ~~~~~~~v~~~~~~~---~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 478 REGFAVAVESNAFED---PAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred ceEEEEEEEeccccc---HHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 445555554433221 022345666776665444 5788888876 89999999999999999875
No 112
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.4e-36 Score=282.93 Aligned_cols=313 Identities=28% Similarity=0.399 Sum_probs=244.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEe----CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 12 STPLTTLGFLERAAAAYTDCPSLVY----NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~a~~~----~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
....++..++.+.++.+|+.+++.. ..+.+||+|+.+++.++|+.|.+.|+..||+|++++.|+++|+.+.+||+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~ 92 (613)
T COG1022 13 AEIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILA 92 (613)
T ss_pred hhcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 3456899999999999999888885 458899999999999999999999997799999999999999999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc-chHHHHHHhccCc--------------------------------
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL-HTYLLLEALSLFP-------------------------------- 134 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~-------------------------------- 134 (330)
+|++.+|+.+..+++.+.++|+.++++++|++.. ..+.+.......+
T Consensus 93 ~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (613)
T COG1022 93 LGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGIS 172 (613)
T ss_pred cCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccch
Confidence 9999999999999999999999999999999763 2222222111000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 173 ~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~ 252 (613)
T COG1022 173 LFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEG 252 (613)
T ss_pred hhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 253 ~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~ 332 (613)
T COG1022 253 GLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGP 332 (613)
T ss_pred HHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCC
Confidence
Q ss_pred -----------------------------------hHHHHhhccCCcc---cCceeEE---EeC-C------CCCcccCC
Q 048729 135 -----------------------------------QRARLKARQGVKT---VGLAEVD---VVN-P------ETGESVKR 166 (330)
Q Consensus 135 -----------------------------------~~~~~~~~~G~~~---~g~te~~---i~d-~------~~g~~~~~ 166 (330)
....+..++|.|+ ||+||+. .+. + .-|+++|.
T Consensus 333 ~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~~~~~gtvG~p~p~ 412 (613)
T COG1022 333 LSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPDRFVLGTVGKPLPG 412 (613)
T ss_pred cchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccccCcccCCcCCcCCC
Confidence 3334456667665 8998842 222 1 13555554
Q ss_pred CCc---eecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEE-eCCeecCHHHHHHHH
Q 048729 167 DGV---SLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVII-SGGENICSAEVESVL 242 (330)
Q Consensus 167 ~~~---~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l 242 (330)
-+. +.|||+|+||++|+|||++|+.|.+.|.+||||+|||+|.+|++|+|.++||++|.|| .+|++|.|..||+.+
T Consensus 413 ~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l 492 (613)
T COG1022 413 IEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKL 492 (613)
T ss_pred ceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHH
Confidence 321 4599999999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred hcCcCcceEEEEeecCCCCCceeEEEEEecCCccc--------CCCCCH------HHHHHHH-------HhcCCCCCCCc
Q 048729 243 YSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL--------TKKPTE------KEIIEYC-------RARLPRYMVPR 301 (330)
Q Consensus 243 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~------~~l~~~l-------~~~l~~~~~p~ 301 (330)
.++|-|.++.|++.... .+.|+|++....-. ....+. ..+.+.+ ..++..++...
T Consensus 493 ~~~~~I~qi~vvg~~k~----~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~ 568 (613)
T COG1022 493 AKSPLIEQICVVGDDKK----FLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIK 568 (613)
T ss_pred hcCCCeeEEEEEecCCc----ceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhh
Confidence 99999999999994333 57788887653210 000011 1222222 22234456666
Q ss_pred eEEEcc-CCC-----CCCCCcccHHHHHHHhhh
Q 048729 302 KVVFSE-ELP-----KTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 302 ~~~~v~-~lP-----~t~~GKv~r~~l~~~~~~ 328 (330)
.+++.+ ++. .|++-|++|..+.+.+.+
T Consensus 569 ~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~ 601 (613)
T COG1022 569 KFVLLPKEFTPENGELTPTLKLKRHVILDRYKD 601 (613)
T ss_pred eeeecccccccccCccccchhhhHHHHHHhhhh
Confidence 666544 444 589999999999988753
No 113
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.2e-36 Score=282.80 Aligned_cols=277 Identities=18% Similarity=0.193 Sum_probs=208.7
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+... ....++.++|++....|.++.+ +..+++++..|+.++..+....+..+...+++.+++++...
T Consensus 139 ~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~v 215 (499)
T PLN03051 139 WTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLV 215 (499)
T ss_pred EccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeC
Confidence 7777665433322 2345888999999888876532 34567888999998877655667889999999999999998
Q ss_pred ccchHHHHHHhc------cCc-----------------h-HHH------------------------------HhhccCC
Q 048729 120 HLHTYLLLEALS------LFP-----------------Q-RAR------------------------------LKARQGV 145 (330)
Q Consensus 120 ~~~~~~~~~~~~------~~~-----------------~-~~~------------------------------~~~~~G~ 145 (330)
|..+..+..... ... . ... ...++|.
T Consensus 216 P~~~~~l~~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~ 295 (499)
T PLN03051 216 PSIVKAWRHTGAFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFST 295 (499)
T ss_pred HHHHHHHHhcCccccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccC
Confidence 887765543211 000 0 000 0124566
Q ss_pred cccCceeEEEeCCCCCcccCCCCceecEEEEecCcc--cccccCCchhhhccccCCC----------eEEeCceEEEecC
Q 048729 146 KTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCV--TVGYFKDKEATRRCISDNG----------WFYTGDIGVMHAD 213 (330)
Q Consensus 146 ~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~~g----------~~~TGD~~~~~~~ 213 (330)
|.+|. +++|+|+ +|++++.+..+.|||+++|+.+ +.||++++. +. .+. +| ||+|||+|++|+|
T Consensus 296 p~~~~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~-~~~-~g~~~~~~~~~~~~~TGDlg~~d~d 370 (499)
T PLN03051 296 ASLGT-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DK-VYY-KGMPMYGSKGMPLRRHGDIMKRTPG 370 (499)
T ss_pred CCCCc-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cc-eee-ecCCccccCCcceeecCCeEEECCC
Confidence 66775 7788887 7888887632479999999976 589997653 33 332 33 7999999999999
Q ss_pred ceEEEEecCCCeEEeCCeecCHHHHHHHHhc-CcCcceEEEEeecCCCCC-ceeEEEE---EecCCcccCCCCCHHHHHH
Q 048729 214 GYVEIKDRSKDVIISGGENICSAEVESVLYS-ITAVNEAAVVARPDMFWG-EIPCAFV---SLKRDLELTKKPTEKEIIE 288 (330)
Q Consensus 214 G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~~~~~~~~~~~l~~ 288 (330)
|+++|+||.||+||++|++|+|.+||++|.+ ||+|.+++|++.+++..+ +.++++| +++++... .+.+++++
T Consensus 371 G~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~---~~~~~l~~ 447 (499)
T PLN03051 371 GYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQ---ARPEALQK 447 (499)
T ss_pred CcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccc---cchHHHHH
Confidence 9999999999999999999999999999996 999999999999998877 6788888 66655310 34455655
Q ss_pred HH----HhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 289 YC----RARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 289 ~l----~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+ +++|+++..|..+.++++||+|++||++|++|++.+.+
T Consensus 448 ~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 448 KFQEAIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKK 491 (499)
T ss_pred HHHHHHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHH
Confidence 54 56687777777899999999999999999999987743
No 114
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-35 Score=271.22 Aligned_cols=264 Identities=23% Similarity=0.288 Sum_probs=205.7
Q ss_pred EEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcC
Q 048729 33 SLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSE 112 (330)
Q Consensus 33 a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~ 112 (330)
++++.++++||+||.++++++|++|. .|+++|++|+++++++++++..++|++++|++++|+++..+.+.+..++++.+
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 36778899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcccchHH-------------------------------------HH---HHhcc---------Cc---------
Q 048729 113 SKLVFVDHLHTYL-------------------------------------LL---EALSL---------FP--------- 134 (330)
Q Consensus 113 ~~~i~~~~~~~~~-------------------------------------~~---~~~~~---------~~--------- 134 (330)
+++++++...... +. ..... .+
T Consensus 80 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~ 159 (414)
T PRK08308 80 CHGLLYGESDFTKLEAVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLIC 159 (414)
T ss_pred CCEEEecCcccccccCCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHH
Confidence 9988875311000 00 00000 00
Q ss_pred --------------------------------------------------------------------hHHHHhh--ccC
Q 048729 135 --------------------------------------------------------------------QRARLKA--RQG 144 (330)
Q Consensus 135 --------------------------------------------------------------------~~~~~~~--~~G 144 (330)
....+.. ..-
T Consensus 160 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 239 (414)
T PRK08308 160 GVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGTFQFHAVMTSGTPLPEAWFYKLRERTTYM 239 (414)
T ss_pred HHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCccccccEEEEccCCCCHHHHHHHHHhCChh
Confidence 0000000 011
Q ss_pred CcccCceeEEEeC--C------CCCcccCCC-------CceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEE
Q 048729 145 VKTVGLAEVDVVN--P------ETGESVKRD-------GVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGV 209 (330)
Q Consensus 145 ~~~~g~te~~i~d--~------~~g~~~~~~-------~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~ 209 (330)
...||.||....- . .-|++++.. .++.||+++++ .++||+|||+++
T Consensus 240 ~~~YG~tE~~~~~~~~~~~~~~~~G~p~~~~~~~~~~~~~~~gel~v~~-------------------~~~~~~TGDl~~ 300 (414)
T PRK08308 240 MQQYGCSEAGCVSICPDMKSHLDLGNPLPHVSVSAGSDENAPEEIVVKM-------------------GDKEIFTKDLGY 300 (414)
T ss_pred hhccCccccCCeeecCCCCCCCccCccCCCeEEEEecCCCCCceEEEEc-------------------CCceEECCceEE
Confidence 2347777754211 0 013333210 01345555543 168999999999
Q ss_pred EecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHH
Q 048729 210 MHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEY 289 (330)
Q Consensus 210 ~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 289 (330)
+|++|+++++||.||++|++|++|+|.+||+.+.++|+|.+++|++..++..++.+.++++...+ .+.+++++.
T Consensus 301 ~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~------~~~~~l~~~ 374 (414)
T PRK08308 301 KSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEE------IDPVQLREW 374 (414)
T ss_pred ECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC------CCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988878888888876543 567899999
Q ss_pred HHhcCCCCCCCceEEEccCCCCCCCCcccHHHH
Q 048729 290 CRARLPRYMVPRKVVFSEELPKTSTGKIQKYLL 322 (330)
Q Consensus 290 l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l 322 (330)
++++|+.+.+|..+++++++|+|++||++|+.|
T Consensus 375 l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 375 CIQHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred HHHhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 999999999999999999999999999999944
No 115
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=7.9e-35 Score=268.13 Aligned_cols=313 Identities=24% Similarity=0.315 Sum_probs=253.8
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 81 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~ 81 (330)
+...+.|+++.|.+.+..+|+.+++.... +.+||.|..+++.+++..|..+|+++++.|++++-|+++|+++
T Consensus 70 ~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis 149 (691)
T KOG1256|consen 70 PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIIS 149 (691)
T ss_pred CCCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHh
Confidence 45678999999999999999999998743 6699999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc-ccchHHHHHHhcc--Cc------------------------
Q 048729 82 QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD-HLHTYLLLEALSL--FP------------------------ 134 (330)
Q Consensus 82 ~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~-~~~~~~~~~~~~~--~~------------------------ 134 (330)
.+||...|.+.+|+-..++++++.++++...+.+++++ +.....+.+.... .+
T Consensus 150 ~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv 229 (691)
T KOG1256|consen 150 EMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGV 229 (691)
T ss_pred HHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCe
Confidence 99999999999999999999999999999999999998 5444444432221 11
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 230 ~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyL 309 (691)
T KOG1256|consen 230 EVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYL 309 (691)
T ss_pred EEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 310 PLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~ 389 (691)
T KOG1256|consen 310 PLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKL 389 (691)
T ss_pred cHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence
Q ss_pred ---------------------------------------------------------------------------hHHHH
Q 048729 135 ---------------------------------------------------------------------------QRARL 139 (330)
Q Consensus 135 ---------------------------------------------------------------------------~~~~~ 139 (330)
.....
T Consensus 390 ~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~d~~ 469 (691)
T KOG1256|consen 390 EHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPGDNV 469 (691)
T ss_pred HHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCCCCC
Confidence 11124
Q ss_pred hhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEE
Q 048729 140 KARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIK 219 (330)
Q Consensus 140 ~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~ 219 (330)
.+++|.|++|. +++++|.....--..+ ..|||+++|++++.||+++|+.|.+.+++|||++|||+|++|++|.+.+.
T Consensus 470 lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~Ii 546 (691)
T KOG1256|consen 470 LGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKII 546 (691)
T ss_pred CCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEEEE
Confidence 67788888886 8999876455545555 45999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEE-eCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccC------CC----------CC
Q 048729 220 DRSKDVII-SGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELT------KK----------PT 282 (330)
Q Consensus 220 GR~dd~ik-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~------~~----------~~ 282 (330)
||.++++| ..|+.|.|..||++..+.+.|.+.+|.+.... ..++++|++++..... .. ..
T Consensus 547 dRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~ 623 (691)
T KOG1256|consen 547 DRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDV 623 (691)
T ss_pred ecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHHHccCchhHHHHhcChhh
Confidence 99999999 89999999999999999999999999987642 3688888886543210 00 01
Q ss_pred HHHHHHHH-----HhcCCCCCCCceEEE------ccCCCCCCCCcccHHHHHHHhhh
Q 048729 283 EKEIIEYC-----RARLPRYMVPRKVVF------SEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 283 ~~~l~~~l-----~~~l~~~~~p~~~~~------v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.+.+.+.+ .+.+..+..-..|.+ ++.--.||+-|++|..+.+.|++
T Consensus 624 k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~ 680 (691)
T KOG1256|consen 624 KEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKK 680 (691)
T ss_pred HHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHH
Confidence 11122222 123455555555555 33445699999999999999864
No 116
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-31 Score=242.71 Aligned_cols=290 Identities=20% Similarity=0.254 Sum_probs=209.0
Q ss_pred hcCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEee--
Q 048729 27 AYTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNN-- 94 (330)
Q Consensus 27 ~~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~-- 94 (330)
..++.++++- ++ -.+|+..+..........+ ...+++...+|.+..+ +..++..+..|+.++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~ 106 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-----GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELD 106 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-----CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecC
Confidence 4466667664 32 2378888876665554433 2345777777765433 3345666777887766
Q ss_pred cCCCCCHHHHHHHHHhcCCc--EEEEcccchHHHHHHhcc---Cc--------------hHHHHhhccCC---cccCcee
Q 048729 95 INTRLDAHTLSVLLQHSESK--LVFVDHLHTYLLLEALSL---FP--------------QRARLKARQGV---KTVGLAE 152 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~--~i~~~~~~~~~~~~~~~~---~~--------------~~~~~~~~~G~---~~~g~te 152 (330)
....+.+..+...+++.+.. +....+..+..+...... .. ...+.....|. ..||.||
T Consensus 107 ~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE 186 (358)
T PRK07824 107 VSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSE 186 (358)
T ss_pred cCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCc
Confidence 45667888999999988843 333333333222211100 00 11111112243 4599988
Q ss_pred EEEeCCCCCcccCCCCc--eecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeEEeCC
Q 048729 153 VDVVNPETGESVKRDGV--SLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVIISGG 230 (330)
Q Consensus 153 ~~i~d~~~g~~~~~~~~--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G 230 (330)
+...-...|.+++.-.. ..|||+++|+.++.||++++... .+..+|||+|||++++ ++|.+++.||.||+||++|
T Consensus 187 ~~~~~~~~G~~~~g~~v~i~~Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G 263 (358)
T PRK07824 187 TSGGCVYDGVPLDGVRVRVEDGRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGG 263 (358)
T ss_pred cCCCcCcCceeCCCCEEEecCCEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEECC
Confidence 64321113444332100 23999999999999999988643 3444789999999999 7999999999999999999
Q ss_pred eecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCC
Q 048729 231 ENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELP 310 (330)
Q Consensus 231 ~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP 310 (330)
++|+|.+||+.+.++|+|.+++|++..++..++.++++++...+.. ...+++++.++++|+.+++|..++++++||
T Consensus 264 ~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~----~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP 339 (358)
T PRK07824 264 LTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPA----PTLEALRAHVARTLDRTAAPRELHVVDELP 339 (358)
T ss_pred EEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCC----cCHHHHHHHHHhhCccccCCCEEEEecCCC
Confidence 9999999999999999999999999998888888989887766544 678999999999999999999999999999
Q ss_pred CCCCCcccHHHHHHHhhh
Q 048729 311 KTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 311 ~t~~GKv~r~~l~~~~~~ 328 (330)
+|++||++|++|++++.+
T Consensus 340 ~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 340 RRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CCCCccccHHHHHHHhhc
Confidence 999999999999999864
No 117
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-31 Score=237.75 Aligned_cols=316 Identities=24% Similarity=0.318 Sum_probs=247.4
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCC-----------------------eeecHHHHHHHHHHHHHHHHHcCCCCCC
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNN-----------------------TTYTWSETHRRCLQVASSLSSVGIQRGH 66 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~-----------------------~~~T~~el~~~~~~~a~~L~~~g~~~gd 66 (330)
+...-.|+.+++.+.++++.++.++-..+ ..+||.|+..++..+++.|...|+++++
T Consensus 36 ~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e 115 (678)
T KOG1180|consen 36 PNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKE 115 (678)
T ss_pred CCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 34455699999999999999999998531 3389999999999999999999999877
Q ss_pred E-EEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhccCc-----------
Q 048729 67 V-VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSLFP----------- 134 (330)
Q Consensus 67 ~-V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----------- 134 (330)
. ++++++.+.+|+..++||++-+..++-+-..+..+.+.|-|.+++++.||++..++..+..-.....
T Consensus 116 ~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~i 195 (678)
T KOG1180|consen 116 TKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPI 195 (678)
T ss_pred CeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCC
Confidence 7 9999999999999999999999999999999999999999999999999999988876554332222
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 196 d~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~ 275 (678)
T KOG1180|consen 196 DYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPE 275 (678)
T ss_pred CCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 276 lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~k 355 (678)
T KOG1180|consen 276 LGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSK 355 (678)
T ss_pred cCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------hHHHHhhccCCcc---cC
Q 048729 135 --------------------------------------------------------------QRARLKARQGVKT---VG 149 (330)
Q Consensus 135 --------------------------------------------------------------~~~~~~~~~G~~~---~g 149 (330)
.+.-...+.++|+ ||
T Consensus 356 V~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYG 435 (678)
T KOG1180|consen 356 VNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYG 435 (678)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcccccccccc
Confidence 1111122233333 55
Q ss_pred ce--------------------------eEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccC-CC--
Q 048729 150 LA--------------------------EVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISD-NG-- 200 (330)
Q Consensus 150 ~t--------------------------e~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-~g-- 200 (330)
.| +++++|-+.|--.+.+.--.|||+++|++++.||+++++.+.+.|.. +|
T Consensus 436 LTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~ 515 (678)
T KOG1180|consen 436 LTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQR 515 (678)
T ss_pred ccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcE
Confidence 54 45556543332222221025999999999999999999999999977 88
Q ss_pred eEEeCceEEEecCceEEEEecCCCeEE-eCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCccc--
Q 048729 201 WFYTGDIGVMHADGYVEIKDRSKDVII-SGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLEL-- 277 (330)
Q Consensus 201 ~~~TGD~~~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-- 277 (330)
||+|||+|++.+||.+.+.+|.+|.+| .+|+-|++.-+|+.+...|-|+...|.+.... ..++++|+++++.-.
T Consensus 516 WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s~~VaiVVPn~~~lt~l 592 (678)
T KOG1180|consen 516 WFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---SKPVAIVVPNQKHLTKL 592 (678)
T ss_pred EEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---ceeEEEEcCCchHHHHH
Confidence 999999999999999999999999999 89999999999999999999999999987664 368888888764210
Q ss_pred --CCCCCH-------------HHHHHHH-----HhcCCCCCCCceEEEccC------CCCCCCCcccHHHHHHHhhh
Q 048729 278 --TKKPTE-------------KEIIEYC-----RARLPRYMVPRKVVFSEE------LPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 278 --~~~~~~-------------~~l~~~l-----~~~l~~~~~p~~~~~v~~------lP~t~~GKv~r~~l~~~~~~ 328 (330)
...... +++.+.+ .++|...++|..|++.++ --.|+.-|+.|+.++..|++
T Consensus 593 A~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ 669 (678)
T KOG1180|consen 593 AEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLKRKEILAAYKK 669 (678)
T ss_pred HHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhhHHHHHHHHHH
Confidence 000111 1111111 456899999999999873 23566779999999988753
No 118
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.97 E-value=3.9e-30 Score=236.95 Aligned_cols=206 Identities=30% Similarity=0.483 Sum_probs=176.1
Q ss_pred HHHHHHhcCCCcEEEe-CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC
Q 048729 21 LERAAAAYTDCPSLVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 99 (330)
Q Consensus 21 l~~~~~~~p~~~a~~~-~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~ 99 (330)
|.++|+++||++|+++ .++++||.||.+.++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|+++.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6789999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEE----cccchH---------------------------HHHHHh------------ccCc--
Q 048729 100 DAHTLSVLLQHSESKLVFV----DHLHTY---------------------------LLLEAL------------SLFP-- 134 (330)
Q Consensus 100 ~~~~l~~~l~~~~~~~i~~----~~~~~~---------------------------~~~~~~------------~~~~-- 134 (330)
+.+.+.++++..+++++++ +..... .+.... ....
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 160 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSDEPQSPEDSPDDPAFI 160 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCHCSHSTTHTTTSEEEE
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccccccccccccCCCCccceeEe
Confidence 9999999999999999996 110000 000000 0000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 161 ~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 240 (417)
T PF00501_consen 161 LFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLGDRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLL 240 (417)
T ss_dssp EEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTTTEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHH
T ss_pred eccccccccccccccccccccccccccccccccccCceEEeeccccccccccccccccccccccccccccccccccccch
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 241 ~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~ 320 (417)
T PF00501_consen 241 ELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIAT 320 (417)
T ss_dssp HHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEE
T ss_pred hcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecccccccceeee
Confidence
Q ss_pred -h--HHH--HhhccCCcccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEE
Q 048729 135 -Q--RAR--LKARQGVKTVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGV 209 (330)
Q Consensus 135 -~--~~~--~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~ 209 (330)
. ... ...++|.|++|+ +++|+|++++++++.+ +.|||+++|++++.||+++++.+.+.|.++|||+|||+|+
T Consensus 321 ~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~ 397 (417)
T PF00501_consen 321 IRPPEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGR 397 (417)
T ss_dssp EEETTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEE
T ss_pred ccccccccccccccccccccc-cccccccccccccccc--ccccccccCCccceeeeccccccccccccccceecceEEE
Confidence 1 111 234678888885 9999999779999988 8899999999999999999999999888568999999999
Q ss_pred EecCceEEEEecCCCeEEeC
Q 048729 210 MHADGYVEIKDRSKDVIISG 229 (330)
Q Consensus 210 ~~~~G~l~~~GR~dd~ik~~ 229 (330)
+|++|+++++||.||+||++
T Consensus 398 ~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 398 LDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EETTSEEEEEEEGSCEEEET
T ss_pred ECCCCeEEEEEeeCCEEEeC
Confidence 99999999999999999974
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.96 E-value=1.2e-28 Score=226.27 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=174.5
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 42 TWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 42 T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
||.||.+.+.+++++|.+ .|+++||+|+++++|+++++++++||+.+|++++|+++..+.+.+.++++..+++.+++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999997 9999999999999999999999999999999999999999999999999999999999976
Q ss_pred cchHHHHHHh-----------------------cc------Cc-------------------------------------
Q 048729 121 LHTYLLLEAL-----------------------SL------FP------------------------------------- 134 (330)
Q Consensus 121 ~~~~~~~~~~-----------------------~~------~~------------------------------------- 134 (330)
.....+.... .. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~~~~~ 160 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYGLDP 160 (408)
T ss_pred chhhhccccCCceEEechhhhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC
Confidence 5443221100 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~ 240 (408)
T TIGR01733 161 DDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVI 240 (408)
T ss_pred CceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEE
Confidence
Q ss_pred ---------hHHH------------------------------------HhhccCCcccCceeEEEeCCCCCcccCCCCc
Q 048729 135 ---------QRAR------------------------------------LKARQGVKTVGLAEVDVVNPETGESVKRDGV 169 (330)
Q Consensus 135 ---------~~~~------------------------------------~~~~~G~~~~g~te~~i~d~~~g~~~~~~~~ 169 (330)
.... ...++|.+++|. +++|+++ ++++++.+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g-- 316 (408)
T TIGR01733 241 LGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANT-RLYVLDD-DLRPVPVG-- 316 (408)
T ss_pred EeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCc-eEEEECC-CCCCCCCC--
Confidence 0000 022355556664 7777777 57888877
Q ss_pred eecEEEEecCcccccccCCchhhhccccCC------C--eEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHH
Q 048729 170 SLGEVVLRGGCVTVGYFKDKEATRRCISDN------G--WFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESV 241 (330)
Q Consensus 170 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------g--~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~ 241 (330)
+.|||+++|++++.||+++++.+.+.|..+ | ||+|||++++|++|++++.||.+|+++++|++++|.+||+.
T Consensus 317 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~ 396 (408)
T TIGR01733 317 VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAA 396 (408)
T ss_pred CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHH
Confidence 789999999999999999998887776422 3 99999999999999999999999999999999999999999
Q ss_pred HhcCcCcceEEE
Q 048729 242 LYSITAVNEAAV 253 (330)
Q Consensus 242 l~~~~~v~~~~v 253 (330)
+..+++|.+++|
T Consensus 397 l~~~~~v~~~~v 408 (408)
T TIGR01733 397 LLRHPGVREAVV 408 (408)
T ss_pred HhcCcchhhhcC
Confidence 999999998875
No 120
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.95 E-value=1.6e-25 Score=211.37 Aligned_cols=298 Identities=18% Similarity=0.242 Sum_probs=231.4
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeC------CeeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHHHHHHHhhh
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYN------NTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPM 87 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~------~~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~~~~~la~~~ 87 (330)
.++.|+|..++.++||.+|+..- ..++||+++++++.+++.+|. +..+++||.|+++.+++.+++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 79999999999999999999973 367999999999999999999 66799999999999999999999999999
Q ss_pred cCcEEeecCCCCC------HHHHHHHHHhcCCcEEEEcccchHHHHHHhccCc---------------------------
Q 048729 88 SGAILNNINTRLD------AHTLSVLLQHSESKLVFVDHLHTYLLLEALSLFP--------------------------- 134 (330)
Q Consensus 88 ~G~~~~~l~~~~~------~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------- 134 (330)
+|++++|+++.-. ...+..+++.+++..|+++......+........
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~~~~ 929 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKKNIK 929 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhhhhh
Confidence 9999999987332 2468889999999999998877666543221111
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 930 k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVys 1009 (1363)
T KOG3628|consen 930 KLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYS 1009 (1363)
T ss_pred ccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHHc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 1010 Gh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~ 1089 (1363)
T KOG3628|consen 1010 GHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFK 1089 (1363)
T ss_pred CCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHHH
Confidence
Q ss_pred ----------------------------------------hHHH-----------------HhhccCCcccCceeEEEeC
Q 048729 135 ----------------------------------------QRAR-----------------LKARQGVKTVGLAEVDVVN 157 (330)
Q Consensus 135 ----------------------------------------~~~~-----------------~~~~~G~~~~g~te~~i~d 157 (330)
+... ...-.|....+ |++.|++
T Consensus 1090 klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~-~~i~Ivn 1168 (1363)
T KOG3628|consen 1090 KLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVY-TDIAIVN 1168 (1363)
T ss_pred HHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCccccc-ceeEEeC
Confidence 0000 01112444566 4999999
Q ss_pred CCCCcccCCCCceecEEEEecCcccccccCCchhhh-ccc---------cCCCeEEeCceEEEe------cC----ceEE
Q 048729 158 PETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATR-RCI---------SDNGWFYTGDIGVMH------AD----GYVE 217 (330)
Q Consensus 158 ~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~-~~~---------~~~g~~~TGD~~~~~------~~----G~l~ 217 (330)
|++-.+|..+ +.||||++|.+-+.+|++..+... ..| ...+|-||||+|+.. .+ .-+|
T Consensus 1169 PEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~Ly 1246 (1363)
T KOG3628|consen 1169 PETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLY 1246 (1363)
T ss_pred CccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEE
Confidence 9999999998 889999999998888885432211 111 113599999999973 23 3489
Q ss_pred EEecCCCeEEeCCeecCHHHHHHHHhc-CcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHH-HhcCC
Q 048729 218 IKDRSKDVIISGGENICSAEVESVLYS-ITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYC-RARLP 295 (330)
Q Consensus 218 ~~GR~dd~ik~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l-~~~l~ 295 (330)
++|-.++.+.++|.+.+|.+||..+.. ||.|..|+|+-... .+++++++... .....+.-.+ +..|.
T Consensus 1247 VlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g-----lvVvviE~~gq------~~~~~LvPlIv~~vL~ 1315 (1363)
T KOG3628|consen 1247 VLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG-----LVVVVIECHGQ------QELADLVPLIVNVVLE 1315 (1363)
T ss_pred EeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC-----eEEEEEEecCc------hhHhhhhHHHHHHHHh
Confidence 999999999999999999999999977 89999999997643 67788887773 2233333333 34455
Q ss_pred CCC-CCceEEEcc--CCCCCCCCcccHHHHHHHh
Q 048729 296 RYM-VPRKVVFSE--ELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 296 ~~~-~p~~~~~v~--~lP~t~~GKv~r~~l~~~~ 326 (330)
.+. +-+.+.||+ .||+++.|..+|..+++.+
T Consensus 1316 eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w 1349 (1363)
T KOG3628|consen 1316 EHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSW 1349 (1363)
T ss_pred hcceEEEEEEEecCCccccCCchhhHHHHHHHHH
Confidence 555 555566776 7999999999999998865
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=99.93 E-value=2.2e-23 Score=211.57 Aligned_cols=105 Identities=18% Similarity=0.246 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeC---C--eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcC
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYN---N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 89 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~---~--~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G 89 (330)
.|+.++|.+.++++|+++|+... + +.+||+|+.+++.++|..|.+.|+++||+|+++++|+++|+++++||+.+|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 59999999999999999999732 2 679999999999999999999999999999999999999999999999999
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 90 AILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
++++|+.+ +.+++.++++..+++++|++..
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~ 536 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRN 536 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchh
Confidence 99999974 4678999999999999998654
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.93 E-value=6.6e-23 Score=185.63 Aligned_cols=273 Identities=18% Similarity=0.156 Sum_probs=184.2
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCC--CCCEEEEECCCCHH--HHH
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQ--RGHVVSVVAPNVPS--MYE 80 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~--~gd~V~~~~~~~~~--~~~ 80 (330)
..++.+++.-..+.+-+..+++. ++ -.+|++.+...+..+++.+ ++. +.|+++.++|.++. ++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 44667777766666645555543 43 2389999987777776654 543 44689999998743 345
Q ss_pred HHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhccCc--------------hHHHHhh---cc
Q 048729 81 LQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSLFP--------------QRARLKA---RQ 143 (330)
Q Consensus 81 ~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~---~~ 143 (330)
.++..+..|+.++... .+++..+...++.. ++++..|.++..+........ ....+.. ..
T Consensus 156 ~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~~~l~slr~i~gGa~l~~~l~~~~~~~g~~~ 232 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLADLDYRLPGVVGVSSGAPSTAATWRCLLAAGLAR 232 (386)
T ss_pred HHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHHhhCcCCCcceeEecCCCCCHHHHHHHHHhcccc
Confidence 5577778899887665 46666655555532 678888888876654322111 1111111 11
Q ss_pred CCcccCceeEEEeCC-----CCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEE
Q 048729 144 GVKTVGLAEVDVVNP-----ETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEI 218 (330)
Q Consensus 144 G~~~~g~te~~i~d~-----~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~ 218 (330)
-...||+||+..+-. +.+.+++.- ++.+ +. ... -....|++|||++++|++|++++
T Consensus 233 v~~~YG~TEt~~i~~~~~~~~~~~~~p~~-----~~~~----------~~---~~~-~g~~~~~~tgD~g~~d~~G~l~i 293 (386)
T TIGR02372 233 LLEVYGATETGGIGLREAPDDPFRLLPDL-----ACFA----------DT---LSS-AGLARRLDLQDRLAWDKDGGFTI 293 (386)
T ss_pred hhheeccccccccccccCCCCCcccCCCc-----cccC----------CC---ccC-CCccceeecCceEEEcCCCcEEE
Confidence 245699998643211 011111110 0000 00 000 01123799999999999999999
Q ss_pred EecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCC
Q 048729 219 KDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYM 298 (330)
Q Consensus 219 ~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 298 (330)
.||.||+||+.|++|+|.+||+.+.++|+|.+++|... ++++.++|++.++... ....+++.++++++++.|+
T Consensus 294 ~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~~-----g~~~~a~vv~~~~~~~--~~~~~~l~~~~~~~L~~~~ 366 (386)
T TIGR02372 294 LGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRLD-----GRRLKAFIVVAEDADE--AELEIELRATAARHLPAPA 366 (386)
T ss_pred ecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEcC-----CceEEEEEEECCCCCh--HHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999998632 4578888888764321 0125689999999999999
Q ss_pred CCceEEEccCCCCCCCCccc
Q 048729 299 VPRKVVFSEELPKTSTGKIQ 318 (330)
Q Consensus 299 ~p~~~~~v~~lP~t~~GKv~ 318 (330)
+|..+.++++||+|++||++
T Consensus 367 ~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 367 RPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred CCcEEEEcccCCCCCCCCcC
Confidence 99999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.92 E-value=5.4e-23 Score=189.77 Aligned_cols=261 Identities=20% Similarity=0.241 Sum_probs=181.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|..++......+++.+...|+++||+++...+... ..+..+++.+..|+.+++++... .+.+...+++.++++++.
T Consensus 95 ~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~ 173 (422)
T TIGR02155 95 YTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMV 173 (422)
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEE
Confidence 788888777777777787889999999988766542 22334577889999998887654 578889999999999999
Q ss_pred cccchHHHHHHhcc-------Cc--------------hHHHHhhccCC---cccCce-----------------------
Q 048729 119 DHLHTYLLLEALSL-------FP--------------QRARLKARQGV---KTVGLA----------------------- 151 (330)
Q Consensus 119 ~~~~~~~~~~~~~~-------~~--------------~~~~~~~~~G~---~~~g~t----------------------- 151 (330)
.|..+..+...... .. .........|. ..||+|
T Consensus 174 ~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~g~~~~~~ 253 (422)
T TIGR02155 174 TPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVETQDGLHIWED 253 (422)
T ss_pred cHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccccCCCceEecC
Confidence 99887665432210 00 00011111111 123333
Q ss_pred --eEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecC-c-----eEEEEecCC
Q 048729 152 --EVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHAD-G-----YVEIKDRSK 223 (330)
Q Consensus 152 --e~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~-G-----~l~~~GR~d 223 (330)
.++|+|+++|.+++++ +.|||++++.. ...+. .+||+|||+++++++ | .+++.||.|
T Consensus 254 ~~~~eivd~~~g~~v~~G--e~Gelvvt~~~------------~~~~p-~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~ 318 (422)
T TIGR02155 254 HFYPEIIDPHTGEVLPDG--EEGELVFTTLT------------KEALP-VIRYRTRDLTRLLPGTARTMRRMDRITGRSD 318 (422)
T ss_pred eeEEEEECCCCCCCCCCC--CeeEEEEecCC------------ccccc-eeeEEcCcEEEEECCCCCcccccccccCccC
Confidence 3456776588888888 88999998732 12222 679999999999875 4 468999999
Q ss_pred CeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC-----CCCHHHHHHHHHhcCCCCC
Q 048729 224 DVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK-----KPTEKEIIEYCRARLPRYM 298 (330)
Q Consensus 224 d~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~~l~~~l~~~l~~~~ 298 (330)
|++|++|.+|+|.+||+++.++|+|.....+........+.+.+.++...+..... ....+++.+.+++++..+.
T Consensus 319 d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 398 (422)
T TIGR02155 319 DMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM 398 (422)
T ss_pred CeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEE
Confidence 99999999999999999999999998555555555444457777777665432100 0114677777877776653
Q ss_pred CCceEEEccCCCCCCCCcccH
Q 048729 299 VPRKVVFSEELPKTSTGKIQK 319 (330)
Q Consensus 299 ~p~~~~~v~~lP~t~~GKv~r 319 (330)
. ..|+.+++||+|+ ||++|
T Consensus 399 ~-v~~~~~~~lp~~~-GK~~~ 417 (422)
T TIGR02155 399 D-VHLVEPGSLPRSE-GKARR 417 (422)
T ss_pred E-EEEECCCCccCCC-CCceE
Confidence 1 2344457999988 99986
No 124
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=6.8e-24 Score=188.41 Aligned_cols=116 Identities=23% Similarity=0.259 Sum_probs=108.6
Q ss_pred CCCeEEeCceEEE-ecCceEEEEecCCCeEEeCC---eecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecC
Q 048729 198 DNGWFYTGDIGVM-HADGYVEIKDRSKDVIISGG---ENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKR 273 (330)
Q Consensus 198 ~~g~~~TGD~~~~-~~~G~l~~~GR~dd~ik~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 273 (330)
.+|||+|||+|++ |++|+++|.||.+ +| ++|+|. ||++|.+||+|.+|+|++.+++.+++.++|+|++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 3899999999998 6999999999998 78 799999 999999999999999999999999999999998764
Q ss_pred CcccCCCCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHh
Q 048729 274 DLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFA 326 (330)
Q Consensus 274 ~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~ 326 (330)
. .+.+++.++++++|+. ++|+++.++++||+|++||++|+.|++++
T Consensus 281 ~------~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 281 P------ADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred C------CCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHh
Confidence 2 5678999999999999 99999999999999999999999999876
No 125
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=2.1e-22 Score=195.57 Aligned_cols=228 Identities=21% Similarity=0.258 Sum_probs=194.0
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
.++.++|..++..+|+.+|+.+.+.++||+++...++++|+.|...|+.+++.|+++.+.++++++.++++++.|+..+|
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 67999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchH-------HH--HHH---h---c--------cCc-----------------
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTY-------LL--LEA---L---S--------LFP----------------- 134 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-------~~--~~~---~---~--------~~~----------------- 134 (330)
+++.++.+++..+++..+++.+++...... .. ... . . ...
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~ 386 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPGLALDDALSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRI 386 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEeccccccccccCCccccccccccCCccCcccccCCCCCeEEEEEccCCCCCCCCcee
Confidence 999999999999999999999998733221 00 000 0 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 048729 135 -------------------------------------------------------------------------------- 134 (330)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (330)
T Consensus 387 ~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~ 466 (642)
T COG1020 387 EHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPL 466 (642)
T ss_pred cCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHH
Confidence
Q ss_pred ----------------------------------hHHHH----------------------------------hhccCCc
Q 048729 135 ----------------------------------QRARL----------------------------------KARQGVK 146 (330)
Q Consensus 135 ----------------------------------~~~~~----------------------------------~~~~G~~ 146 (330)
..... ..++|.|
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p 546 (642)
T COG1020 467 LLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRP 546 (642)
T ss_pred HHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCccee
Confidence 00000 1245566
Q ss_pred ccCceeEEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecCceEEEEecCCCeE
Q 048729 147 TVGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHADGYVEIKDRSKDVI 226 (330)
Q Consensus 147 ~~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~G~l~~~GR~dd~i 226 (330)
+.+ +.+.++|. .++++|.+ ..||+++.|.++..||+++|+.+...|..+.+|+|||+++++.+|.+.++||.|+++
T Consensus 547 ~~n-~~~~ild~-~~~~~p~g--v~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qv 622 (642)
T COG1020 547 VAN-TQLYILDQ-GLRPLPLG--VPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQV 622 (642)
T ss_pred eCC-CeEEEECC-CCCcCCCC--CCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEecccccee
Confidence 666 36777775 78888888 789999999999999999999999999733499999999999999999999999999
Q ss_pred EeCCeecCHHHHHHHHhcCc
Q 048729 227 ISGGENICSAEVESVLYSIT 246 (330)
Q Consensus 227 k~~G~~v~~~~iE~~l~~~~ 246 (330)
|++|+++.+.+||..+.++|
T Consensus 623 ki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 623 KIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred EeceEecCcHHHHHHHhcCC
Confidence 99999999999999998775
No 126
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=1.6e-22 Score=196.11 Aligned_cols=126 Identities=29% Similarity=0.369 Sum_probs=116.5
Q ss_pred CeEEeCceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCC
Q 048729 200 GWFYTGDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTK 279 (330)
Q Consensus 200 g~~~TGD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 279 (330)
.+|+|||+++..++|.+.+.||.|++||++|.|+.+.+|+..+..+|.|.++.+....+.+.++++.+|++.......
T Consensus 454 r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~-- 531 (1032)
T KOG1178|consen 454 RIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS-- 531 (1032)
T ss_pred hcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc--
Confidence 379999999999999999999999999999999999999999999999999999999998888999999998877653
Q ss_pred CCCHHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcccHHHHHHHhhh
Q 048729 280 KPTEKEIIEYCRARLPRYMVPRKVVFSEELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 280 ~~~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
.....++.++..+|+.|++|+.++.++++|.|++||+|+++|.+...+
T Consensus 532 -~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~~s~ 579 (1032)
T KOG1178|consen 532 -VLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLEYNSK 579 (1032)
T ss_pred -hhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhhhhhh
Confidence 447889999999999999999999999999999999999999985443
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.81 E-value=1.3e-17 Score=148.61 Aligned_cols=259 Identities=24% Similarity=0.268 Sum_probs=184.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+.|+...+..+|+.|...|..+||+|..+..-+.. -+...+|+.++|+.++|+++... +....+++++++++|.+
T Consensus 110 ~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~-~~~~~l~~df~~tvI~~ 188 (438)
T COG1541 110 YTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT-ERQLELMKDFKPTVIAA 188 (438)
T ss_pred cCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH-HHHHHHHHhcCCcEEEE
Confidence 9999999999999999999999999999988874322 25667889999999999988444 56677999999999999
Q ss_pred cccchHHHHHHhccCc---------------------hHHHHhhccC---CcccCceeE---------------------
Q 048729 119 DHLHTYLLLEALSLFP---------------------QRARLKARQG---VKTVGLAEV--------------------- 153 (330)
Q Consensus 119 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~G---~~~~g~te~--------------------- 153 (330)
+|++...+.+...... .........| ..+||.||.
T Consensus 189 tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~~glhi~eD~~ 268 (438)
T COG1541 189 TPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTERNGLHIWEDHF 268 (438)
T ss_pred ChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCcccccccccCCCcchhhc
Confidence 9999888776655442 1222223333 345777763
Q ss_pred --EEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecC----ce-----EEEEecC
Q 048729 154 --DVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHAD----GY-----VEIKDRS 222 (330)
Q Consensus 154 --~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~----G~-----l~~~GR~ 222 (330)
.|+||++|+.++.+ +.|||+++.-. . ..... --|+|||++...++ |+ ..+.||.
T Consensus 269 ~~Ei~dP~t~e~l~dg--e~GelV~T~L~--~-------~~~Pl----IRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~ 333 (438)
T COG1541 269 IFEIVDPETGEQLPDG--ERGELVITTLT--K-------EGMPL----IRYRTGDITVILSDPCGCGRTHRRIERIEGRS 333 (438)
T ss_pred eeeeecCCcCccCCCC--CeeEEEEEecc--c-------cCcce----EEEEcCCeeEecccCCCCCCccccccccCccc
Confidence 66888899999999 78999998632 1 01111 14999999999763 32 5789999
Q ss_pred CCeEEeCCeecCHHHHHHHHhcCcCcc-eEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCC-CCC
Q 048729 223 KDVIISGGENICSAEVESVLYSITAVN-EAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRY-MVP 300 (330)
Q Consensus 223 dd~ik~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~p 300 (330)
||++++.|.+|+|..||+.|.+.+.+. +-.++... ++..+.+.+-|++.++.. .. ....++.+.+...+... ...
T Consensus 334 dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~ 410 (438)
T COG1541 334 DDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELENEAE-EL-EDERRLAKKLIKNIKSELGVR 410 (438)
T ss_pred ccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecCccc-ch-HHHHHHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999 33333333 444567888888876522 00 12222223443332222 222
Q ss_pred c--eEEEccCCCCCCCCcccH
Q 048729 301 R--KVVFSEELPKTSTGKIQK 319 (330)
Q Consensus 301 ~--~~~~v~~lP~t~~GKv~r 319 (330)
. .++.+.++|+|.. |..|
T Consensus 411 ~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 411 VEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred eEEEEEeccceecccC-ceeE
Confidence 2 4556679999954 6554
No 128
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.75 E-value=7.5e-16 Score=142.80 Aligned_cols=261 Identities=16% Similarity=0.147 Sum_probs=164.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+.++...+...++.+...|+.++|+++++.+.+.. .....++++..|+.+++... ......+++..+++.++.
T Consensus 106 ~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~ 182 (445)
T TIGR03335 106 LTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVA 182 (445)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEE
Confidence 8999999888888888888899999999999886643 34456788899998876553 234577899999999988
Q ss_pred cccchHHHHHHhcc-------Cc--------------hHHHHhhccCCc---ccCcee---------------------E
Q 048729 119 DHLHTYLLLEALSL-------FP--------------QRARLKARQGVK---TVGLAE---------------------V 153 (330)
Q Consensus 119 ~~~~~~~~~~~~~~-------~~--------------~~~~~~~~~G~~---~~g~te---------------------~ 153 (330)
.+.....+...... .. .........|.+ .||+|| +
T Consensus 183 ~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~~~c~~~~g~h~~~d~~~v 262 (445)
T TIGR03335 183 SVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMCGECQAVAGLHVPEDLVHL 262 (445)
T ss_pred CHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhheEEecCCCCccccCCceEE
Confidence 87765444321110 00 111111122322 255544 5
Q ss_pred EEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEec-C----c----eEEEEecCCC
Q 048729 154 DVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHA-D----G----YVEIKDRSKD 224 (330)
Q Consensus 154 ~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~-~----G----~l~~~GR~dd 224 (330)
+|+|++++.+++.| +.|||++++-......... ..+ -|+|||++++.. + | .+...||.||
T Consensus 263 EIvDp~~~~~vp~G--e~GELvvT~L~~~~~r~~~-----Pli----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd 331 (445)
T TIGR03335 263 DVYDPRHQRFLPDG--ECGRIVLTTLLKPGERCGS-----LLI----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAE 331 (445)
T ss_pred EEEcCCCCCCCcCC--CceEEEEEecCCCCccCCc-----eEE----EeecCceEEEecCCCCCCCCCcceeCCCcccCc
Confidence 67788677888888 8899999873210000000 111 389999998732 2 2 2455799999
Q ss_pred eEEeCCeecCHHHHHHHHhcC---cCcceEE-EEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhc----CCC
Q 048729 225 VIISGGENICSAEVESVLYSI---TAVNEAA-VVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRAR----LPR 296 (330)
Q Consensus 225 ~ik~~G~~v~~~~iE~~l~~~---~~v~~~~-v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~----l~~ 296 (330)
+++++|.+|+|.+||++|.++ +++...+ ++...++.....+.+.++..+... ...+++.+.+... ++.
T Consensus 332 ~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~----~~~~~~~~~~~~~~~~~~~~ 407 (445)
T TIGR03335 332 TIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECEDKDN----CSIHDIQENFTGTFLKYKPE 407 (445)
T ss_pred eEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEecCccc----chHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999994 5554333 322222222335666666655533 2334444444443 222
Q ss_pred -------CCCCceEEEc--cCCCCCC-CCcccH
Q 048729 297 -------YMVPRKVVFS--EELPKTS-TGKIQK 319 (330)
Q Consensus 297 -------~~~p~~~~~v--~~lP~t~-~GKv~r 319 (330)
..+...+.++ .++|+++ .||..|
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 408 LIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred hhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 1222233333 4899984 699876
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.51 E-value=1e-12 Score=125.79 Aligned_cols=108 Identities=14% Similarity=0.222 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCC-----eeecHHHHHHHHHHHHH-HHHHcCCCCCCEEEEECCCC--HHHHHHHHHhhh
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNN-----TTYTWSETHRRCLQVAS-SLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPM 87 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~-----~~~T~~el~~~~~~~a~-~L~~~g~~~gd~V~~~~~~~--~~~~~~~la~~~ 87 (330)
.+...++..-.+++...|.+.-+ ..+||..+..++.+.|+ .|.+-|+.++|+|.++...+ .++++..++|+.
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 56667777778888899988743 56999999999999999 66688999999999999877 899999999999
Q ss_pred cCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 88 SGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 88 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
.|..++|+.+..+.+++...++....++++++..-.
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~ 210 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGE 210 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhH
Confidence 999999999988899999999999999988865433
No 130
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.45 E-value=5.6e-13 Score=112.17 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=82.2
Q ss_pred HHHHHHhcCCCcEEEeC------CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe
Q 048729 21 LERAAAAYTDCPSLVYN------NTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 93 (330)
Q Consensus 21 l~~~~~~~p~~~a~~~~------~~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~ 93 (330)
+...++.+|+++|++.. ++++||+|+.+.++++|++|.+ .|+++||+|+++++|+++++.+++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999742 2369999999999999999997 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 94 NINTRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 94 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
|++ ..+++++++++.+...
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~ 100 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAA 100 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhh
Confidence 995 6789999998876654
No 131
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.40 E-value=4.5e-13 Score=91.73 Aligned_cols=70 Identities=53% Similarity=0.752 Sum_probs=61.4
Q ss_pred HHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCC--ceEEEccC-CCCCC
Q 048729 237 EVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVP--RKVVFSEE-LPKTS 313 (330)
Q Consensus 237 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~v~~-lP~t~ 313 (330)
+||+.+.+||+|.+++|++..++..++++++++++ +.++++++++++|+.|++| ..++.+++ ||+|+
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~----------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~ 70 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL----------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTP 70 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE----------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBET
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe----------eecccccchhhhCCCcceeeEEEEccccCcCCCCC
Confidence 69999999999999999999998888999999988 2399999999999999999 55666677 99999
Q ss_pred CCc
Q 048729 314 TGK 316 (330)
Q Consensus 314 ~GK 316 (330)
+||
T Consensus 71 ~GK 73 (73)
T PF13193_consen 71 SGK 73 (73)
T ss_dssp TSS
T ss_pred CCC
Confidence 998
No 132
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=98.53 E-value=1.6e-05 Score=72.96 Aligned_cols=194 Identities=12% Similarity=0.147 Sum_probs=108.5
Q ss_pred cCCCCCCEEEEEC-CCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHHHHHhcc----Cc
Q 048729 60 VGIQRGHVVSVVA-PNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLLLEALSL----FP 134 (330)
Q Consensus 60 ~g~~~gd~V~~~~-~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~----~~ 134 (330)
.|+..|++++.+. .++ .+.-. +......+...+..-+.+.....|++.+|+++++.|+.+..+...... ..
T Consensus 138 ~g~~~g~r~a~~~~~~~-~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~ 213 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADN-NLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIK 213 (430)
T ss_pred cccccCCcEEEEEccCh-hHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCC
Confidence 4888999999994 333 21111 222222133333335578899999999999999999988776653221 11
Q ss_pred --------------hHHHHhhccCCcc---cCceeEEEeCCCCCcccCCCCceecEEEEecCccccc--ccCCch---hh
Q 048729 135 --------------QRARLKARQGVKT---VGLAEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG--YFKDKE---AT 192 (330)
Q Consensus 135 --------------~~~~~~~~~G~~~---~g~te~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~g--y~~~~~---~~ 192 (330)
.........|+++ ||.||..+ . ..|+ .|.+++.-+.+..- ++++.. ..
T Consensus 214 ~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tEg~l-a----~eC~-----~g~lHl~ed~~~vE~~ivD~~~~~~~V 283 (430)
T TIGR02304 214 PKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATEGFL-A----STCR-----CGTLHLNEDLVHIEKQYLDEHKRFVPI 283 (430)
T ss_pred ceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCchhhe-E----EecC-----CCCEEEccccEEEEeeEECCCCceEEE
Confidence 2223344556654 89987322 1 1111 12344443322111 221110 01
Q ss_pred hccccCCC----eEEeCceEEEecC----ce----E-EEEecCCCeEEe---CC--eecCHHHHHHHH-hcCcCcceEEE
Q 048729 193 RRCISDNG----WFYTGDIGVMHAD----GY----V-EIKDRSKDVIIS---GG--ENICSAEVESVL-YSITAVNEAAV 253 (330)
Q Consensus 193 ~~~~~~~g----~~~TGD~~~~~~~----G~----l-~~~GR~dd~ik~---~G--~~v~~~~iE~~l-~~~~~v~~~~v 253 (330)
...+...+ -|+|||++...++ |. + .+.||.||++++ +| ..++|..++..+ ...++|.+.-+
T Consensus 284 iT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi 363 (430)
T TIGR02304 284 ITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRV 363 (430)
T ss_pred EecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEE
Confidence 11111111 4999999887544 32 3 488999999985 44 445999998874 45788888766
Q ss_pred EeecCCCCCceeEEEEEe
Q 048729 254 VARPDMFWGEIPCAFVSL 271 (330)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~ 271 (330)
+-.. .+.+.+.++.
T Consensus 364 ~Q~~----~~~l~v~~~~ 377 (430)
T TIGR02304 364 LQTG----SAQLELIADC 377 (430)
T ss_pred EEcc----CCeEEEEEEe
Confidence 6432 2245555554
No 133
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.93 E-value=1.8e-05 Score=56.87 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=52.2
Q ss_pred CeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccC---CCCCHHHHHHHHHhcCCCCCCCceEEEc
Q 048729 230 GENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELT---KKPTEKEIIEYCRARLPRYMVPRKVVFS 306 (330)
Q Consensus 230 G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~l~~~l~~~l~~~~~p~~~~~v 306 (330)
|.+|+|.+||+++.++|++...+.+........+.+.+.|++.++...+ .....+++.+.+++++.-. .-..++-.
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~-~~V~lv~~ 79 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVR-PEVELVPP 79 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS--EEEEEE-T
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCce-EEEEEECC
Confidence 7899999999999999999955555555444567888888888864210 0012355555556655322 12234445
Q ss_pred cCCCCCCCCcccH
Q 048729 307 EELPKTSTGKIQK 319 (330)
Q Consensus 307 ~~lP~t~~GKv~r 319 (330)
.+||++ .||..|
T Consensus 80 gtLpr~-~~K~~R 91 (96)
T PF14535_consen 80 GTLPRS-EGKAKR 91 (96)
T ss_dssp T-S----SSSS-S
T ss_pred CCccCC-CCcceE
Confidence 589998 678765
No 134
>PLN03051 acyl-activating enzyme; Provisional
Probab=97.25 E-value=0.00061 Score=64.53 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=47.6
Q ss_pred CCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 72 APNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 72 ~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
+||++++++++|||+++|++++|+++.++++++.++++..+++++++++.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~ 50 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDV 50 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCc
Confidence 58999999999999999999999999999999999999999999998764
No 135
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=95.34 E-value=0.2 Score=46.04 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=75.9
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~--~~~~~~~la~~~~G~~~~~l~ 96 (330)
.||.++-+. +. -++|.-.+...+...+..+ |+...+|+++-.|.. ...++..+|++..|++.+...
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~ 308 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA 308 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC
Confidence 467766663 22 4589989988888877665 777777888877764 555788899999999999889
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
+.+.+....+.+.+.+++.++.+|..+..
T Consensus 309 ~~f~~k~alqai~~ekcT~l~gtPtM~~D 337 (596)
T KOG1177|consen 309 PSFDPKDALQAISNEKCTTLYGTPTMFVD 337 (596)
T ss_pred CCCChHHHHHHHHhhceEEEecChHHHHH
Confidence 99999999999999999999998865443
No 136
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=95.22 E-value=0.15 Score=48.57 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=59.4
Q ss_pred EEeCceEEEec--Cc--eEEEEecCCCeEEeCCeecCHHHHHHHHhcC-----cCcceEEEEeecCCCCCceeEEEEEec
Q 048729 202 FYTGDIGVMHA--DG--YVEIKDRSKDVIISGGENICSAEVESVLYSI-----TAVNEAAVVARPDMFWGEIPCAFVSLK 272 (330)
Q Consensus 202 ~~TGD~~~~~~--~G--~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~-----~~v~~~~v~~~~~~~~~~~~~~~v~~~ 272 (330)
|+.||+++... ++ .+.|+||.+.++.+.|++++-..|++++.+. -.+.+-.+..........+.+.++++.
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~ 450 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELE 450 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEEC
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeC
Confidence 89999999853 34 7999999999999999999999999998775 234455555542222234566777776
Q ss_pred CCcccCCCCCHHHHHHHHHhcC
Q 048729 273 RDLELTKKPTEKEIIEYCRARL 294 (330)
Q Consensus 273 ~~~~~~~~~~~~~l~~~l~~~l 294 (330)
... .+.+++.+.+.+.|
T Consensus 451 ~~~-----~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 451 GEP-----DDLEELAKALDESL 467 (528)
T ss_dssp S-H-----HHHHHHHHHHHHCS
T ss_pred CCc-----hHHHHHHHHHHHHh
Confidence 662 34567777777776
No 137
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=95.15 E-value=0.19 Score=42.28 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=46.4
Q ss_pred HHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCc
Q 048729 58 SSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESK 114 (330)
Q Consensus 58 ~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~ 114 (330)
...|++++|++. .+|... .+...+++++..|+..+.+ ++++++.+.+.+++.+++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERVT 227 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcCC
Confidence 556889999999 999875 3455789999999998877 589999999999998874
No 138
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=94.51 E-value=3.6 Score=37.30 Aligned_cols=65 Identities=29% Similarity=0.447 Sum_probs=44.9
Q ss_pred EEEeCCCCCcccCCCCceecEEEEecCcccccccCCchhhhccccCCCeEEeCceEEEecC--------ceEEEEecCCC
Q 048729 153 VDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCISDNGWFYTGDIGVMHAD--------GYVEIKDRSKD 224 (330)
Q Consensus 153 ~~i~d~~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~--------G~l~~~GR~dd 224 (330)
+.+.|+.|..+++.| +.|-|-+-++... .| .+...|.|+|....+ ..+.++||.+.
T Consensus 287 V~iRDp~tl~~~~~G--e~Gli~vidl~~~-s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 287 VIIRDPETLEPLPPG--ETGLIQVIDLANT-SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEECCCCCcCCCCC--CeeEEEEEccccc-CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 355677788888887 7788877654211 11 456889999987654 27999999974
Q ss_pred eEEeCCeecC
Q 048729 225 VIISGGENIC 234 (330)
Q Consensus 225 ~ik~~G~~v~ 234 (330)
-.++|....
T Consensus 351 -ae~RGCs~~ 359 (365)
T PF04443_consen 351 -AEIRGCSLT 359 (365)
T ss_pred -CccCCcHHH
Confidence 346676553
No 139
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=94.46 E-value=0.43 Score=45.12 Aligned_cols=82 Identities=18% Similarity=0.179 Sum_probs=63.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|+..+......... ..+++++|++....|....+ +...++++..|+.++..+.. +++.+...+++.+++.+++.
T Consensus 187 ~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~ 262 (521)
T PRK06187 187 LSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAV 262 (521)
T ss_pred eehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEch
Confidence 788888766666555 45889999999999877544 34445688999998776654 88999999999999999987
Q ss_pred ccchHHH
Q 048729 120 HLHTYLL 126 (330)
Q Consensus 120 ~~~~~~~ 126 (330)
|.++..+
T Consensus 263 p~~~~~l 269 (521)
T PRK06187 263 PTIWQML 269 (521)
T ss_pred HHHHHHH
Confidence 7655433
No 140
>PRK06164 acyl-CoA synthetase; Validated
Probab=94.14 E-value=0.54 Score=44.90 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=68.4
Q ss_pred CCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCC
Q 048729 29 TDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTR 98 (330)
Q Consensus 29 p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~ 98 (330)
++.++++. ++ -.+|++.+...+..++.. .++.++|+++.++|.+..+ +..+++.+..|+.++..+ .
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA---YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP-V 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh---cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-C
Confidence 56677775 32 237888887666555544 4788999999999987443 456788889999887654 5
Q ss_pred CCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 99 LDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 99 ~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
+.+..+...+++.++++++..|..+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~ 282 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRR 282 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHH
Confidence 678889999999999999887765543
No 141
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=94.11 E-value=0.62 Score=44.10 Aligned_cols=79 Identities=10% Similarity=-0.069 Sum_probs=61.2
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+...... .+++++|++...+|.++.+ +..+++++..|+..+..+ ...++.+...+++.+++++...
T Consensus 181 ~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 256 (515)
T TIGR03098 181 LSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLAAV 256 (515)
T ss_pred EecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEecC
Confidence 7888887666655544 4678999999999987654 445678889999887554 5678899999999999988887
Q ss_pred ccch
Q 048729 120 HLHT 123 (330)
Q Consensus 120 ~~~~ 123 (330)
|.++
T Consensus 257 P~~~ 260 (515)
T TIGR03098 257 PPLW 260 (515)
T ss_pred hHHH
Confidence 7544
No 142
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=94.11 E-value=0.61 Score=44.67 Aligned_cols=95 Identities=6% Similarity=-0.001 Sum_probs=67.3
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~ 96 (330)
.|+.+|++. ++ -.+|++.+...+.... ...+++++|+++.++|....+ ...++..+..|+.++...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 456667664 32 2388888865544433 345788999999999865433 334577778898877665
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
....++.+...+++.+++.+...|.++..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 286 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDY 286 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHH
Confidence 56788999999999999999888765543
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=93.82 E-value=0.39 Score=45.40 Aligned_cols=80 Identities=13% Similarity=0.055 Sum_probs=61.5
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|++.+...+..+.. ..+++++|+++...|.... +...+++++..|+.+++. +..+++.+...+++.++++++
T Consensus 185 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 260 (513)
T PRK07656 185 MLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVLP 260 (513)
T ss_pred EEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEEe
Confidence 3888888766655443 4488999999999887644 355678999999988765 457889999999999999988
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
..|.++
T Consensus 261 ~~p~~~ 266 (513)
T PRK07656 261 GPPTMY 266 (513)
T ss_pred chHHHH
Confidence 876544
No 144
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=93.59 E-value=0.71 Score=44.50 Aligned_cols=82 Identities=9% Similarity=-0.044 Sum_probs=61.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+.. .....+++++|++....+....+ ...+++.+..|+..+......+++.+...+++.++++++.
T Consensus 225 ~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 301 (570)
T PRK04319 225 HVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYT 301 (570)
T ss_pred EecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEe
Confidence 778777544333 33356888999988887766443 4557888899998887777788999999999999999888
Q ss_pred cccchHH
Q 048729 119 DHLHTYL 125 (330)
Q Consensus 119 ~~~~~~~ 125 (330)
.|..+..
T Consensus 302 ~P~~~~~ 308 (570)
T PRK04319 302 APTAIRM 308 (570)
T ss_pred CHHHHHH
Confidence 7765543
No 145
>PRK08315 AMP-binding domain protein; Validated
Probab=93.59 E-value=0.8 Score=43.92 Aligned_cols=81 Identities=9% Similarity=0.048 Sum_probs=61.3
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|+..+...+..+.. ..+++++|++....|... .++..+++.+..|+..+......++..+...+++.+++.++
T Consensus 218 ~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~ 294 (559)
T PRK08315 218 TLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALY 294 (559)
T ss_pred EeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEe
Confidence 3788877655554443 458899999999888753 44556788889999887666677888899999999999988
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
..|..+
T Consensus 295 ~~P~~~ 300 (559)
T PRK08315 295 GVPTMF 300 (559)
T ss_pred cchHHH
Confidence 766543
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=93.57 E-value=0.91 Score=43.51 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=61.3
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|++.+...+..+... .+++++|++....|... ..+..+++++..|+.++.....+++..+...+++.+++.++
T Consensus 220 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~ 296 (558)
T PRK12583 220 TLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALY 296 (558)
T ss_pred EeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEe
Confidence 38888886555554443 58899999999888653 44566788888999887555567888888999999999988
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
..|.++
T Consensus 297 ~~P~~~ 302 (558)
T PRK12583 297 GVPTMF 302 (558)
T ss_pred ccHHHH
Confidence 877553
No 147
>PLN02736 long-chain acyl-CoA synthetase
Probab=92.55 E-value=0.99 Score=44.38 Aligned_cols=95 Identities=11% Similarity=-0.050 Sum_probs=69.3
Q ss_pred cCCCcEEE-eCC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC
Q 048729 28 YTDCPSLV-YNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT 97 (330)
Q Consensus 28 ~p~~~a~~-~~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~ 97 (330)
.|+.+|++ +++ -.+|++.+...+..+.. ..++.++|+++.++|.++.+ ...+++++..|+..+..+.
T Consensus 219 ~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~ 295 (651)
T PLN02736 219 KPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSL---STKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQG 295 (651)
T ss_pred CccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHh---ccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 35666665 332 12899888766665553 45788999999999987544 3345667788988765543
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 98 RLDAHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
.+..+...+++.++++++..|.++..+.
T Consensus 296 --~~~~~~~~i~~~~~t~~~~vP~~~~~l~ 323 (651)
T PLN02736 296 --DNLKLMDDLAALRPTIFCSVPRLYNRIY 323 (651)
T ss_pred --CHHHHHHHHHHhCCcEEecchHHHHHHH
Confidence 5678999999999999999998876553
No 148
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=92.44 E-value=1.5 Score=41.92 Aligned_cols=92 Identities=13% Similarity=-0.021 Sum_probs=65.5
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~ 96 (330)
.++.+|++- +. -.+|++.+...+.....+ .+++++|++....|.... ++..+++.+..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 356676663 22 237888887665554443 467899999999887644 3556778899999888765
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
..++..+...+++.+++.+...|...
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~ 290 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMV 290 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHH
Confidence 46778888888889888887766443
No 149
>PRK07638 acyl-CoA synthetase; Validated
Probab=92.35 E-value=1.7 Score=40.87 Aligned_cols=82 Identities=9% Similarity=-0.004 Sum_probs=61.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|.+.+...+.... ...+++++|++....+..+.+ +...+..+..|+..+.. +..++..+...+++.+++++...
T Consensus 163 ~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 238 (487)
T PRK07638 163 RAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMYTV 238 (487)
T ss_pred EecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEEeC
Confidence 77777755554433 355788999999888876543 45567778889988755 56788999999999999999988
Q ss_pred ccchHHH
Q 048729 120 HLHTYLL 126 (330)
Q Consensus 120 ~~~~~~~ 126 (330)
|..+..+
T Consensus 239 P~~~~~l 245 (487)
T PRK07638 239 PTMLESL 245 (487)
T ss_pred cHHHHHH
Confidence 7665443
No 150
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=92.27 E-value=0.98 Score=41.40 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=70.2
Q ss_pred cCCCcEEEe-C-C-------eeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeec
Q 048729 28 YTDCPSLVY-N-N-------TTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNI 95 (330)
Q Consensus 28 ~p~~~a~~~-~-~-------~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l 95 (330)
.|+.++++. + | -.+|++.+...+..+. +. ..+++ |+++.++|.+..+ +..+++++..|+..+..
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccccc
Confidence 568888875 1 2 2389999988888776 33 23333 6888888877444 37789999999999888
Q ss_pred CCCCC--HHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 96 NTRLD--AHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 96 ~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
+.... ++.+...+++.+++.+++.|..+..+.
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 262 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEALL 262 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHH
T ss_pred ccccccccccchhccccccccccccccccccccc
Confidence 86543 567889999999999999887766554
No 151
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=92.24 E-value=1.2 Score=40.58 Aligned_cols=96 Identities=19% Similarity=0.100 Sum_probs=70.4
Q ss_pred CCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCC
Q 048729 29 TDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTR 98 (330)
Q Consensus 29 p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~ 98 (330)
++.++++. +. -.+|++.+...+..+.. ..+++++|++....|.+..+ +..++..+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 56666663 22 23788888777666665 45778999999998887554 55668888889888777654
Q ss_pred CC--HHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 99 LD--AHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 99 ~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
.. +..+..++++.+++.+++.|..+..+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 44 788999999999999998887665443
No 152
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=92.23 E-value=1.5 Score=42.28 Aligned_cols=95 Identities=17% Similarity=0.094 Sum_probs=67.2
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT 97 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~ 97 (330)
.++.++++. ++ -.+|++.+...+.... ...++.++|+++.+.|.++.+ +...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 356666553 32 1377777754443333 345889999999999976543 34567888889987755 4
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcccchHHH
Q 048729 98 RLDAHTLSVLLQHSESKLVFVDHLHTYLL 126 (330)
Q Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 126 (330)
.+.+..+...+++.+++.+...|.++..+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 274 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADL 274 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHH
Confidence 57888999999999999999888765443
No 153
>PRK05852 acyl-CoA synthetase; Validated
Probab=92.06 E-value=2.7 Score=40.13 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=60.0
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEee-cCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNN-INTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~-l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|++.+...+..+.. ..+++++|++..+.|.... ++..+++++..|+..+. -...+++..+...+++.+++.++
T Consensus 196 ~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 272 (534)
T PRK05852 196 WTHANIASSVRAIIT---GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYT 272 (534)
T ss_pred ecHHHHHHHHHHHHH---HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEE
Confidence 788888766655554 3478899999999987754 45567788888776553 23456788888899999999888
Q ss_pred EcccchHHH
Q 048729 118 VDHLHTYLL 126 (330)
Q Consensus 118 ~~~~~~~~~ 126 (330)
..|..+..+
T Consensus 273 ~~P~~~~~l 281 (534)
T PRK05852 273 AVPTIHQIL 281 (534)
T ss_pred cChHHHHHH
Confidence 777655433
No 154
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=91.94 E-value=1.7 Score=40.77 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=60.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|+..+...+.... ...+++++|+++...|....+ +..+++.+..|+..+..+ ..++..+...+++.+++.+...
T Consensus 161 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~ 236 (483)
T PRK03640 161 QTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVV 236 (483)
T ss_pred EecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeH
Confidence 77777654433332 346889999999999876443 444677788899987665 5778999999999999999988
Q ss_pred ccchHHH
Q 048729 120 HLHTYLL 126 (330)
Q Consensus 120 ~~~~~~~ 126 (330)
|.++..+
T Consensus 237 P~~~~~l 243 (483)
T PRK03640 237 STMLQRL 243 (483)
T ss_pred HHHHHHH
Confidence 8765443
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=91.52 E-value=0.84 Score=42.12 Aligned_cols=80 Identities=10% Similarity=0.088 Sum_probs=60.4
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
.+|++.+...+..+... .+++++|+++...|....+ +..+++++..|+..+..+.. +.+...+++.+++.+..
T Consensus 130 ~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~ 203 (436)
T TIGR01923 130 PHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISL 203 (436)
T ss_pred EEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEe
Confidence 38998887776666654 4889999999988876433 34568888999998877643 38888899999999988
Q ss_pred cccchHH
Q 048729 119 DHLHTYL 125 (330)
Q Consensus 119 ~~~~~~~ 125 (330)
.|.++..
T Consensus 204 ~P~~l~~ 210 (436)
T TIGR01923 204 VPTQLNR 210 (436)
T ss_pred HHHHHHH
Confidence 7765543
No 156
>PLN03052 acetate--CoA ligase; Provisional
Probab=91.07 E-value=1.8 Score=43.30 Aligned_cols=81 Identities=16% Similarity=0.100 Sum_probs=55.5
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|.+.+.. .+.......+++++|++....+.+... ...+++.+..|+..+..+.......+.+++++.+++++.+.
T Consensus 376 ~sh~~~l~---~~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~ 452 (728)
T PLN03052 376 WTQLTPLR---AAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTV 452 (728)
T ss_pred ECchHHHH---HHHHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEEC
Confidence 56654432 222233346899999998887776543 33456889999999877654445568888899999888877
Q ss_pred ccchH
Q 048729 120 HLHTY 124 (330)
Q Consensus 120 ~~~~~ 124 (330)
|.++.
T Consensus 453 Pt~l~ 457 (728)
T PLN03052 453 PSIVK 457 (728)
T ss_pred HHHHH
Confidence 65543
No 157
>PRK08308 acyl-CoA synthetase; Validated
Probab=91.06 E-value=3.1 Score=38.21 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=60.6
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|++.+...+..+.. ..++.++|++...+|.++.+ +..++..+..|+..+..+ ..++..+...+++.++++++
T Consensus 120 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 195 (414)
T PRK08308 120 RRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHILY 195 (414)
T ss_pred EEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEEE
Confidence 3888888765555544 34678899999998877544 456788889999887665 45678888899999999888
Q ss_pred EcccchH
Q 048729 118 VDHLHTY 124 (330)
Q Consensus 118 ~~~~~~~ 124 (330)
..|..+.
T Consensus 196 ~~P~~~~ 202 (414)
T PRK08308 196 AVPLMLH 202 (414)
T ss_pred cCHHHHH
Confidence 8775543
No 158
>PLN02614 long-chain acyl-CoA synthetase
Probab=91.03 E-value=1.7 Score=42.85 Aligned_cols=85 Identities=11% Similarity=-0.067 Sum_probs=62.5
Q ss_pred ecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLS--SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~--~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|++.+...+..+...+. ..++.++|+++.++|.++.+ ....+.++..|+.++..+ .++..+...+++.+|++++
T Consensus 243 lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~ 320 (666)
T PLN02614 243 ISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFC 320 (666)
T ss_pred EecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEE
Confidence 898888776665554432 23678999999999987433 223455667888876553 3678999999999999999
Q ss_pred EcccchHHHH
Q 048729 118 VDHLHTYLLL 127 (330)
Q Consensus 118 ~~~~~~~~~~ 127 (330)
..|.++..+.
T Consensus 321 ~vP~~~~~l~ 330 (666)
T PLN02614 321 AVPRVLDRVY 330 (666)
T ss_pred ecHHHHHHHH
Confidence 9998887654
No 159
>PRK06188 acyl-CoA synthetase; Validated
Probab=90.99 E-value=1.7 Score=41.28 Aligned_cols=79 Identities=6% Similarity=-0.028 Sum_probs=60.4
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
+|+..+...+.... ...++..+|++....|.+..+...+++.+..|+..+..+ ...+..+.+.+++.++++++..|
T Consensus 188 ~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 263 (524)
T PRK06188 188 GTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVP 263 (524)
T ss_pred eehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehH
Confidence 77777765544333 356888999999999988766666678888899887665 46788899999999999988776
Q ss_pred cch
Q 048729 121 LHT 123 (330)
Q Consensus 121 ~~~ 123 (330)
..+
T Consensus 264 ~~l 266 (524)
T PRK06188 264 TMI 266 (524)
T ss_pred HHH
Confidence 544
No 160
>PLN02246 4-coumarate--CoA ligase
Probab=90.77 E-value=2.2 Score=40.79 Aligned_cols=95 Identities=12% Similarity=0.025 Sum_probs=65.8
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeec
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNI 95 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l 95 (330)
.|+.++++. ++ -.+|++.+...+........ ..++.++|++....|..+.+ ...+++.+..|+.++..
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 256 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIM 256 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEe
Confidence 356666653 22 23788887665554433322 46789999999999876544 34567888999999877
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
+ ...++.+...+++.+++.+...|..+
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~ 283 (537)
T PLN02246 257 P-KFEIGALLELIQRHKVTIAPFVPPIV 283 (537)
T ss_pred C-CCCHHHHHHHHHHhCceEEEcchHHH
Confidence 5 46778888899999998887766543
No 161
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.72 E-value=2.5 Score=40.56 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=75.4
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~ 96 (330)
.|+.+|++- ++ -.+|++.+...+..+...+... +++.|+++..+|..+.+ ...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 366777663 33 2389999988877777665321 78999999999987554 556778789999887776
Q ss_pred C-CCCHHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 97 T-RLDAHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 97 ~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
+ .+.++.+...+.+.+++.+...|.++..+.
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll 279 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRELL 279 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHHH
Confidence 5 789999999999999999998888776654
No 162
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=90.66 E-value=3.5 Score=39.50 Aligned_cols=79 Identities=13% Similarity=0.068 Sum_probs=59.2
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+.... ...+++++|++....|.+.. ++..+++.+..|+.++..+ ...++.+...+++.+++.++.
T Consensus 217 ~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~ 292 (547)
T PRK13295 217 HTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTMA 292 (547)
T ss_pred eccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEe
Confidence 78877765554433 45688999999999998744 4556788889999987554 567889999999999998877
Q ss_pred cccch
Q 048729 119 DHLHT 123 (330)
Q Consensus 119 ~~~~~ 123 (330)
.+.++
T Consensus 293 ~p~~~ 297 (547)
T PRK13295 293 STPFL 297 (547)
T ss_pred cHHHH
Confidence 65544
No 163
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=90.55 E-value=2.3 Score=45.50 Aligned_cols=81 Identities=12% Similarity=-0.018 Sum_probs=60.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC--CCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT--RLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~--~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|.+.+...+.... ...+++++|+++...|.+++. +..++..+..|+..+..++ ...+..+...+++.+++++.
T Consensus 618 ~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~ 694 (1296)
T PRK10252 618 VGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTH 694 (1296)
T ss_pred eccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEE
Confidence 78877755444333 356899999999999998776 3456778888998887654 45678889999999999888
Q ss_pred EcccchH
Q 048729 118 VDHLHTY 124 (330)
Q Consensus 118 ~~~~~~~ 124 (330)
..|..+.
T Consensus 695 ~~Ps~l~ 701 (1296)
T PRK10252 695 FVPSMLA 701 (1296)
T ss_pred eCHHHHH
Confidence 7776543
No 164
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=90.35 E-value=3.2 Score=40.03 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=60.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+..+. .....++.++|++...+|..+.+ +...++.+..|+..+......+++.+...+++.+++.++..
T Consensus 201 ~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 279 (576)
T PRK05620 201 YSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGV 279 (576)
T ss_pred EEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeec
Confidence 77777754333221 12245788999999999987654 34457778889988766667788999999999999999887
Q ss_pred ccchH
Q 048729 120 HLHTY 124 (330)
Q Consensus 120 ~~~~~ 124 (330)
|..+.
T Consensus 280 P~~~~ 284 (576)
T PRK05620 280 PTLWI 284 (576)
T ss_pred CHHHH
Confidence 76543
No 165
>PRK08316 acyl-CoA synthetase; Validated
Probab=90.16 E-value=3.6 Score=38.96 Aligned_cols=80 Identities=9% Similarity=-0.055 Sum_probs=59.9
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|+..+... ++......+++++|++....|....+ ...+++++..|+..++.+ ...++.+...+++.++++++
T Consensus 190 ~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 265 (523)
T PRK08316 190 MLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSFF 265 (523)
T ss_pred EEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEEE
Confidence 3888887544 33444456899999999998876543 344567788899988765 45788999999999999998
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
+.|.++
T Consensus 266 ~~P~~~ 271 (523)
T PRK08316 266 APPTVW 271 (523)
T ss_pred eCHHHH
Confidence 877654
No 166
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=90.15 E-value=3 Score=39.45 Aligned_cols=81 Identities=15% Similarity=-0.013 Sum_probs=60.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+.... ....+++++|++....|..+.+ ...+++.+..|+.++..+...++..+...+++.+++++..
T Consensus 181 ~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 258 (508)
T TIGR02262 181 HTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYG 258 (508)
T ss_pred EechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEec
Confidence 77877765543322 2345889999999998887654 3455677888998887777778888999999999998888
Q ss_pred cccch
Q 048729 119 DHLHT 123 (330)
Q Consensus 119 ~~~~~ 123 (330)
.|..+
T Consensus 259 ~P~~~ 263 (508)
T TIGR02262 259 VPTLY 263 (508)
T ss_pred chHHH
Confidence 77543
No 167
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=90.12 E-value=1.9 Score=46.56 Aligned_cols=82 Identities=10% Similarity=-0.040 Sum_probs=60.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC--CCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT--RLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~--~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|++.+...+..+.. ..++.++|++..+++.+++. +..+|.++..|++++..+. ...+..+...+++.+++.+.
T Consensus 435 ~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~ 511 (1389)
T TIGR03443 435 GRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTH 511 (1389)
T ss_pred eccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEE
Confidence 788877665544433 45889999999998877654 4456888899998876553 23577899999999999998
Q ss_pred EcccchHH
Q 048729 118 VDHLHTYL 125 (330)
Q Consensus 118 ~~~~~~~~ 125 (330)
..|.++..
T Consensus 512 ~~Ps~~~~ 519 (1389)
T TIGR03443 512 LTPAMGQL 519 (1389)
T ss_pred eCHHHHHH
Confidence 87765443
No 168
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=90.06 E-value=2.8 Score=40.62 Aligned_cols=96 Identities=15% Similarity=0.073 Sum_probs=67.8
Q ss_pred HhcCCCcEEE-eCCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH-HHhh-hcCcEEee
Q 048729 26 AAYTDCPSLV-YNNT--------TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ-FGVP-MSGAILNN 94 (330)
Q Consensus 26 ~~~p~~~a~~-~~~~--------~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~-la~~-~~G~~~~~ 94 (330)
...||.+|.+ ++++ -+||+-+...+..+.+.+. -++++|+++.++|.++-+=-++ .++. ..|+++.
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~- 263 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL- 263 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE-
Confidence 3457777766 4432 2999999888888777764 3789999999999986553332 3333 3444433
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcccchHHH
Q 048729 95 INTRLDAHTLSVLLQHSESKLVFVDHLHTYLL 126 (330)
Q Consensus 95 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 126 (330)
. ..++..+..-+...+|++++..|.+++.+
T Consensus 264 ~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i 293 (613)
T COG1022 264 F--KEDPRTLLEDLKEVRPTVMIGVPRVWEKV 293 (613)
T ss_pred e--cCCHHHHHHHHHHhCCeEEeechHHHHHH
Confidence 2 23578899999999999999998766554
No 169
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=90.04 E-value=3 Score=41.61 Aligned_cols=78 Identities=12% Similarity=0.057 Sum_probs=54.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..... ..++.++|+++..+|..+. +...+++.+..|+..+..+.......+...+.+.+++.+..
T Consensus 385 ~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~ 461 (718)
T PRK08043 385 HSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFG 461 (718)
T ss_pred EcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEc
Confidence 888888666555443 3588999999999997543 34556788889998876664445556666777777777665
Q ss_pred ccc
Q 048729 119 DHL 121 (330)
Q Consensus 119 ~~~ 121 (330)
.|.
T Consensus 462 ~p~ 464 (718)
T PRK08043 462 TST 464 (718)
T ss_pred hHH
Confidence 543
No 170
>PRK07529 AMP-binding domain protein; Validated
Probab=89.94 E-value=3.4 Score=40.48 Aligned_cols=94 Identities=10% Similarity=-0.008 Sum_probs=63.1
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~ 96 (330)
.++.+|.+. ++ -.+|++.+...+..... ..++.++|+++...|... ..+..+++.+..|+.++..+
T Consensus 211 ~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 211 GPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL---LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred CcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH---hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 346666654 32 23888887665544443 346789999999998764 33556788889999887665
Q ss_pred CC-CC----HHHHHHHHHhcCCcEEEEcccchH
Q 048729 97 TR-LD----AHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 97 ~~-~~----~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
+. +. ...+..++++.+++.++..|..+.
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 320 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYA 320 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHH
Confidence 42 21 246777889999998887765443
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=89.92 E-value=3.2 Score=43.67 Aligned_cols=94 Identities=10% Similarity=0.067 Sum_probs=67.9
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~ 96 (330)
.+|.+|.+- ++ -.+|++.+...+..... ..++.++|++...+|..+.+ ....++.+..|+..+..+
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 356666663 22 23888888766655443 45788999999888875433 444677788898887777
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
...+++.+.+.+++.+++.+...|..+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 884 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLR 884 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHH
Confidence 6678889999999999999988776554
No 172
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=89.66 E-value=3.3 Score=40.22 Aligned_cols=80 Identities=9% Similarity=-0.068 Sum_probs=59.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..+... .+++++|+++..+|..+.+ +..+++++..|+..+. .+.+.+..+...+.+.+++.+..
T Consensus 219 ~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~~~ 294 (600)
T PRK08279 219 MSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAFQY 294 (600)
T ss_pred EeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEEee
Confidence 8888887666655544 5889999999999987543 4456777778887764 55677888888899999988877
Q ss_pred cccchH
Q 048729 119 DHLHTY 124 (330)
Q Consensus 119 ~~~~~~ 124 (330)
.|.+..
T Consensus 295 ~p~l~~ 300 (600)
T PRK08279 295 IGELCR 300 (600)
T ss_pred hHHHHH
Confidence 665443
No 173
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=89.62 E-value=3.8 Score=39.00 Aligned_cols=94 Identities=9% Similarity=-0.022 Sum_probs=65.6
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH---HHHHhhhcCcEEeec
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE---LQFGVPMSGAILNNI 95 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~---~~la~~~~G~~~~~l 95 (330)
.++.+|++- ++ -.+|+..+...+.... ...++.++|++...+|.++.+-. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 456666663 22 2378887765554433 34678899999999997755422 367888889987654
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
+...+..+...+++.+++++...|..+..
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 286 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVAL 286 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHH
Confidence 45677888889999999999887766543
No 174
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=89.52 E-value=2 Score=40.84 Aligned_cols=87 Identities=11% Similarity=-0.061 Sum_probs=66.2
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCC--CCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTR--LDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~--~~~~~l~~~l~~~~~~~i 116 (330)
-|.+.+.-.....+.+. ..++++|++....+.... ....+++.+.+|+..+..+.. .+++++.+++++.+++.+
T Consensus 191 H~~gg~l~~~~~~~~~~--~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~ 268 (528)
T COG0365 191 HSHGGYLVEHRLTAKFH--GDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIF 268 (528)
T ss_pred EeCchHHHHHHHHHHHh--hCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceE
Confidence 56665555554444443 456699999988888744 356679999999999877643 258999999999999999
Q ss_pred EEcccchHHHHHH
Q 048729 117 FVDHLHTYLLLEA 129 (330)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (330)
++.|..+..+...
T Consensus 269 ~tsPT~~R~l~~~ 281 (528)
T COG0365 269 GTSPTFLRRLMKL 281 (528)
T ss_pred eeCHHHHHHHHhc
Confidence 9999988877653
No 175
>PRK13388 acyl-CoA synthetase; Provisional
Probab=89.52 E-value=4.8 Score=38.51 Aligned_cols=89 Identities=12% Similarity=0.019 Sum_probs=60.6
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~ 96 (330)
.++.+|++. ++ -.+|++.+...+..+.. ..+++++|++..+.|....+ +..+++.+..|+..+. .
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE---RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH---HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 346677664 22 23788877655554443 45889999999988876443 3445567778887764 4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
+..++..+...+++.+++++...+
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p 247 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVG 247 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehH
Confidence 557788888899999988876543
No 176
>PRK07788 acyl-CoA synthetase; Validated
Probab=89.52 E-value=2 Score=41.14 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=57.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|+..+...+. ......++.++|++....|....+ +..++.++..|+.++.. ...+++.+...+++.+++.+...
T Consensus 227 ~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~ 302 (549)
T PRK07788 227 RPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVVV 302 (549)
T ss_pred ccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEEH
Confidence 66666644333 344466889999999888876544 33456678889887655 56778889999999999998887
Q ss_pred ccchH
Q 048729 120 HLHTY 124 (330)
Q Consensus 120 ~~~~~ 124 (330)
|..+.
T Consensus 303 P~~~~ 307 (549)
T PRK07788 303 PVMLS 307 (549)
T ss_pred HHHHH
Confidence 65443
No 177
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=89.47 E-value=2.2 Score=40.83 Aligned_cols=83 Identities=19% Similarity=0.225 Sum_probs=58.9
Q ss_pred ecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|...+... ..+..+. ..++.++|++..+.|....+ ....++.+..|+.++..++.+.++.+...+++.+++.+..
T Consensus 196 ~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~ 273 (539)
T PRK07008 196 YSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAG 273 (539)
T ss_pred EecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEe
Confidence 666655322 2222332 56788999999888875443 3344777889998887777788899999999999999888
Q ss_pred cccchHH
Q 048729 119 DHLHTYL 125 (330)
Q Consensus 119 ~~~~~~~ 125 (330)
.|..+..
T Consensus 274 ~P~~~~~ 280 (539)
T PRK07008 274 VPTVWLG 280 (539)
T ss_pred chHHHHH
Confidence 7765443
No 178
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=88.87 E-value=4.1 Score=39.05 Aligned_cols=80 Identities=10% Similarity=0.041 Sum_probs=59.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|+..+....... ....+++++|++....|.+..+ +..+++.+..|+.+++.+ ..+++.+...+++.+++.+...
T Consensus 200 ~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~ 275 (542)
T PRK06155 200 CPHAQFYWWGRNS---AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP-RFSASGFWPAVRRHGATVTYLL 275 (542)
T ss_pred EEHHHHHHHHHHH---HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-CCCHHHHHHHHHHhCCcEEEch
Confidence 6887775544333 3345889999999999976554 345688888999887654 5678899999999999988877
Q ss_pred ccchH
Q 048729 120 HLHTY 124 (330)
Q Consensus 120 ~~~~~ 124 (330)
+..+.
T Consensus 276 p~~~~ 280 (542)
T PRK06155 276 GAMVS 280 (542)
T ss_pred HHHHH
Confidence 65443
No 179
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=88.59 E-value=3.4 Score=40.76 Aligned_cols=97 Identities=10% Similarity=-0.078 Sum_probs=67.4
Q ss_pred CCCcEEE-eCC--------eeecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecC
Q 048729 29 TDCPSLV-YNN--------TTYTWSETHRRCLQVASSLS--SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 29 p~~~a~~-~~~--------~~~T~~el~~~~~~~a~~L~--~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~ 96 (330)
|+.+|.+ +++ -.+|++.+...+..+...+. ...+.++|+++.++|.++.+ ....+.++..|+.++...
T Consensus 219 ~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~ 298 (660)
T PLN02861 219 KTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQ 298 (660)
T ss_pred CCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 5666655 433 23888888776665554432 12357899999999987433 222344678888876553
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
..+..+...+++.+|++++..|.++..+.
T Consensus 299 --~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 327 (660)
T PLN02861 299 --GDIRYLMEDVQALKPTIFCGVPRVYDRIY 327 (660)
T ss_pred --CCHHHHHHHHHHhCCcEEeechHHHHHHH
Confidence 46788999999999999999998887664
No 180
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=88.41 E-value=3.9 Score=39.11 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=60.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH---HHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY---ELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~---~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|.+.+...+..... ..+++++|++...+|.++.+- ...++++..|+..+.. +...+......+++.+++++.
T Consensus 202 ~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~ 277 (536)
T PRK10946 202 RTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNVTA 277 (536)
T ss_pred EehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcEEE
Confidence 888888776665443 457899999999988775442 2468888899988754 445677788888999998888
Q ss_pred EcccchHHH
Q 048729 118 VDHLHTYLL 126 (330)
Q Consensus 118 ~~~~~~~~~ 126 (330)
..|..+..+
T Consensus 278 ~~p~~~~~l 286 (536)
T PRK10946 278 LVPPAVSLW 286 (536)
T ss_pred eChHHHHHH
Confidence 877655433
No 181
>PLN02654 acetate-CoA ligase
Probab=88.30 E-value=4.1 Score=40.27 Aligned_cols=67 Identities=9% Similarity=-0.001 Sum_probs=52.2
Q ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
..+++++|++...+|.+..+ ...+++.+..|+.++..+. ...+..+..++++.+++.+.+.|..+..
T Consensus 311 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 382 (666)
T PLN02654 311 AFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRS 382 (666)
T ss_pred hcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHH
Confidence 46889999999888876433 4456788999999987764 2457889999999999999988766544
No 182
>PRK06839 acyl-CoA synthetase; Validated
Probab=88.09 E-value=6.8 Score=36.76 Aligned_cols=82 Identities=10% Similarity=0.077 Sum_probs=58.7
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+.. .....++.++|++..+.|....+ ....++.+..|+..+. +....++.+...+++.+++.+..
T Consensus 169 ~s~~~l~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~i~~~~~t~~~~ 244 (496)
T PRK06839 169 LTQENMFWNALN---NTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-PRKFEPTKALSMIEKHKVTVVMG 244 (496)
T ss_pred EEhHHHHHHHHH---HHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-ccCCCHHHHHHHHHhhCCeEEEe
Confidence 777776443332 23456889999999998876433 3445677888888754 45678889999999999999988
Q ss_pred cccchHHH
Q 048729 119 DHLHTYLL 126 (330)
Q Consensus 119 ~~~~~~~~ 126 (330)
.|.++..+
T Consensus 245 ~P~~~~~l 252 (496)
T PRK06839 245 VPTIHQAL 252 (496)
T ss_pred hHHHHHHH
Confidence 77665443
No 183
>PRK07787 acyl-CoA synthetase; Validated
Probab=87.98 E-value=5.7 Score=37.18 Aligned_cols=78 Identities=12% Similarity=-0.023 Sum_probs=57.0
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~--~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..+.. ..++.++|++....|.. ..+...+++.+..|+.++... ..+++.+...++ .+++.+..
T Consensus 148 ~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~~ 222 (471)
T PRK07787 148 LSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYFG 222 (471)
T ss_pred EeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEEc
Confidence 788888766655554 45788999998888764 334556788899999987654 467788888888 88888777
Q ss_pred cccch
Q 048729 119 DHLHT 123 (330)
Q Consensus 119 ~~~~~ 123 (330)
.|..+
T Consensus 223 ~P~~~ 227 (471)
T PRK07787 223 VPTVW 227 (471)
T ss_pred chHHH
Confidence 66544
No 184
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=87.94 E-value=4.2 Score=38.76 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=52.7
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC-CC--CHHHHHHHHHhcCCcE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQ-RGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT-RL--DAHTLSVLLQHSESKL 115 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~-~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~-~~--~~~~l~~~l~~~~~~~ 115 (330)
+|++.+...+..+.. ..++. ++|+++..+|..+.+ +..+++.+..|+.++..+. .+ .+..+...+.+.++++
T Consensus 172 ~th~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 248 (525)
T PRK05851 172 LSPGAVLSNLRGLNA---RVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATL 248 (525)
T ss_pred ecHHHHHHHHHHHHH---HhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeE
Confidence 888888766665544 34777 899999999987654 3455778888998876553 22 4566777777777776
Q ss_pred EEE
Q 048729 116 VFV 118 (330)
Q Consensus 116 i~~ 118 (330)
+.+
T Consensus 249 ~~~ 251 (525)
T PRK05851 249 TAA 251 (525)
T ss_pred EeC
Confidence 543
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=87.92 E-value=6.7 Score=41.39 Aligned_cols=93 Identities=14% Similarity=0.111 Sum_probs=64.2
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~ 96 (330)
.|+.++.+- ++ -.+|++.+...+....+ ..+++++|++...+|..+.+ ...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 456666653 32 23888888666655554 44788999999999976443 345677778898887766
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 97 TRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 97 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
.....+.+.+.+++.+++.+...|.++
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l 894 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFL 894 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHH
Confidence 555566677788888888877666543
No 186
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=87.92 E-value=4.5 Score=40.57 Aligned_cols=97 Identities=9% Similarity=-0.015 Sum_probs=66.9
Q ss_pred cCCCcEEE-eCCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC
Q 048729 28 YTDCPSLV-YNNT--------TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT 97 (330)
Q Consensus 28 ~p~~~a~~-~~~~--------~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~ 97 (330)
.|+.+|.+ ++++ -+|++-+...+..+.... ..+..+.|+++.++|.++.+ ....+.++..|+..+..+.
T Consensus 302 ~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~-~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~ 380 (746)
T PTZ00342 302 DPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS-IFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSK 380 (746)
T ss_pred CccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc-cccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 35666655 4332 389988877766554321 11223568999999987543 2345667888998876653
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcccchHHHH
Q 048729 98 RLDAHTLSVLLQHSESKLVFVDHLHTYLLL 127 (330)
Q Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 127 (330)
++..+...+.+.+|++++..|.++..+.
T Consensus 381 --~~~~l~~di~~~~pT~~~~VP~v~~~i~ 408 (746)
T PTZ00342 381 --DINYFSKDIYNSKGNILAGVPKVFNRIY 408 (746)
T ss_pred --CHHHHHHHHHHhCCcEEEchHHHHHHHH
Confidence 6788999999999999999998776654
No 187
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=87.43 E-value=5.4 Score=37.59 Aligned_cols=81 Identities=10% Similarity=-0.006 Sum_probs=58.9
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCC--CCHHHHHHHHHhcCCcEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTR--LDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~--~~~~~l~~~l~~~~~~~i 116 (330)
.+|+..+...+..+.. ..++..+|++....|.++.. +..+++++..|+..+..+.. ..+..+...+++.+++.+
T Consensus 160 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (502)
T TIGR01734 160 QISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVW 236 (502)
T ss_pred EEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEE
Confidence 3888888655544333 46888999999888877544 45668889999998877653 456778888888888887
Q ss_pred EEcccch
Q 048729 117 FVDHLHT 123 (330)
Q Consensus 117 ~~~~~~~ 123 (330)
...|.+.
T Consensus 237 ~~~p~~~ 243 (502)
T TIGR01734 237 VSTPSFV 243 (502)
T ss_pred EEChhHH
Confidence 7776544
No 188
>PRK13382 acyl-CoA synthetase; Provisional
Probab=87.24 E-value=6.5 Score=37.57 Aligned_cols=80 Identities=10% Similarity=0.013 Sum_probs=56.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+ ...+...++.++|++....|....+ +...+..+..|+.++. ...++++.+...+++.+++++...
T Consensus 216 ~s~~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~ 291 (537)
T PRK13382 216 RSGPGGIGTL---KAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVT-RRRFDPEATLDLIDRHRATGLAVV 291 (537)
T ss_pred eccchHHHHH---HHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEE-CCCcCHHHHHHHHHHhCCEEEEeh
Confidence 6665554333 3344456788999998888877554 3455777788888765 456788899999999999988887
Q ss_pred ccchH
Q 048729 120 HLHTY 124 (330)
Q Consensus 120 ~~~~~ 124 (330)
|..+.
T Consensus 292 P~~~~ 296 (537)
T PRK13382 292 PVMFD 296 (537)
T ss_pred HHHHH
Confidence 76543
No 189
>PRK13383 acyl-CoA synthetase; Provisional
Probab=86.99 E-value=7.8 Score=36.75 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=50.0
Q ss_pred HHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 54 ASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 54 a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
...+...+++++|++....|....+ +...++.+..|+.+++.. ..+++.+...+++.+++.+...|.++.
T Consensus 206 ~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 276 (516)
T PRK13383 206 VTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLA 276 (516)
T ss_pred HhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHH
Confidence 3344566889999999998876443 344566677898887554 567788888888888888877665443
No 190
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=86.27 E-value=4.7 Score=39.65 Aligned_cols=66 Identities=12% Similarity=-0.051 Sum_probs=50.0
Q ss_pred HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..+++++|++..+.+.+......+++.+..|+..+..+. ...+..+..++++.+++.+.+.|.++.
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 367 (655)
T PRK03584 299 HCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLD 367 (655)
T ss_pred hcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHH
Confidence 457899999988887776554556788899998887653 346788888999999888877665443
No 191
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=86.27 E-value=7.3 Score=37.81 Aligned_cols=43 Identities=12% Similarity=0.175 Sum_probs=38.4
Q ss_pred EEeCceEEEec----CceEEEEecCCCeEEeCCeecCHHHHHHHHhc
Q 048729 202 FYTGDIGVMHA----DGYVEIKDRSKDVIISGGENICSAEVESVLYS 244 (330)
Q Consensus 202 ~~TGD~~~~~~----~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~ 244 (330)
|+.||++++.. --.|.|+||.+.++.+.|++++-..++.++.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 89999999853 35799999999999999999999999998877
No 192
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=85.77 E-value=5.1 Score=39.24 Aligned_cols=67 Identities=12% Similarity=0.087 Sum_probs=51.5
Q ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
..+++++|++....+.+... ...+++.+..|+..+..+. ...+..+..++++.+++.+++.|..+..
T Consensus 268 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 339 (628)
T TIGR02316 268 IFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRV 339 (628)
T ss_pred hcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHH
Confidence 46889999999888876443 4557888999998876653 3457888899999999999887765543
No 193
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=85.71 E-value=11 Score=35.30 Aligned_cols=81 Identities=10% Similarity=-0.011 Sum_probs=59.0
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCC--CCHHHHHHHHHhcCCcEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTR--LDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~--~~~~~l~~~l~~~~~~~i 116 (330)
.+|++.+...+...... .++..+|++....|.++.. +..++..+..|+..+..+.. .++..+...+++.+++.+
T Consensus 162 ~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~ 238 (503)
T PRK04813 162 QISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVW 238 (503)
T ss_pred EeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEE
Confidence 38888887665555443 5788899999888877554 44556778889988777653 457788888888888888
Q ss_pred EEcccch
Q 048729 117 FVDHLHT 123 (330)
Q Consensus 117 ~~~~~~~ 123 (330)
...|.+.
T Consensus 239 ~~~p~~~ 245 (503)
T PRK04813 239 VSTPSFA 245 (503)
T ss_pred EeChHHH
Confidence 7776544
No 194
>PTZ00297 pantothenate kinase; Provisional
Probab=85.08 E-value=7.6 Score=41.83 Aligned_cols=256 Identities=17% Similarity=0.149 Sum_probs=177.0
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+..+.......+..++|+++.++|..+-+ ....++++..|+.... .++..+...+++.+|++++..
T Consensus 621 LTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~V 696 (1452)
T PTZ00297 621 VTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAA 696 (1452)
T ss_pred EeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEec
Confidence 99999988888876542222456889999999987443 3455777888987752 357899999999999999999
Q ss_pred ccchHHHHHHhccCc-----------------------------------------------------------------
Q 048729 120 HLHTYLLLEALSLFP----------------------------------------------------------------- 134 (330)
Q Consensus 120 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 134 (330)
|.++..+........
T Consensus 697 Prv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~ 776 (1452)
T PTZ00297 697 PSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL 776 (1452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh
Confidence 987776543221100
Q ss_pred -----------------hHHHHhhccCCcccCceeEEEeCC-CCCcccCCCCceecEEEEecCcccccccCCchhhhccc
Q 048729 135 -----------------QRARLKARQGVKTVGLAEVDVVNP-ETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEATRRCI 196 (330)
Q Consensus 135 -----------------~~~~~~~~~G~~~~g~te~~i~d~-~~g~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 196 (330)
.........|.|++|+ |++|.+. +.+.. + ..|||+++ |+++|+.|.+.+
T Consensus 777 ~~i~i~~g~glTE~~~~~~~~~~~~~G~Plpgv-EvKI~~~~E~~~~---~--~~GEIlvr-------~~kdpe~T~e~~ 843 (1452)
T PTZ00297 777 EHISVCYVPCLREVFFLPSEGVFCVDGTPAPSL-QVDLEPFDEPSDG---A--GIGQLVLA-------KKGEPRRTLPIA 843 (1452)
T ss_pred CCceEEEecceEEeeeecCCCCcccCCeecCce-EEEEcccccccCC---C--CCCeEEEE-------ECCChHHHHHhh
Confidence 0000000116677775 7777653 22221 1 24999995 457888887643
Q ss_pred cCCCeEEeCceEEEecCceEEEEecCCCeEE-eCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCc
Q 048729 197 SDNGWFYTGDIGVMHADGYVEIKDRSKDVII-SGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDL 275 (330)
Q Consensus 197 ~~~g~~~TGD~~~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 275 (330)
+||+ +||+|.+.||++|++| .+|++|+|..||+.+..+|.|.+++|++..++ .++|+|+++...
T Consensus 844 --~gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~e~ 908 (1452)
T PTZ00297 844 --AQWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNRDT 908 (1452)
T ss_pred --CcCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCHHH
Confidence 5675 6999999999999999 89999999999999999999999999998765 378888776421
Q ss_pred cc---------C------CCCCHH--------HHHHHH-----HhcCCCCCCCceEEEcc-CC-----CCCCCCcccHHH
Q 048729 276 EL---------T------KKPTEK--------EIIEYC-----RARLPRYMVPRKVVFSE-EL-----PKTSTGKIQKYL 321 (330)
Q Consensus 276 ~~---------~------~~~~~~--------~l~~~l-----~~~l~~~~~p~~~~~v~-~l-----P~t~~GKv~r~~ 321 (330)
-. . ...... ++.+.+ .+++..+++++.|.+++ +| -.||+.|++|..
T Consensus 909 l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~ 988 (1452)
T PTZ00297 909 VEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDA 988 (1452)
T ss_pred HHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHH
Confidence 11 0 001112 233332 12256678888777754 44 479999999999
Q ss_pred HHHHhhh
Q 048729 322 LREFAKS 328 (330)
Q Consensus 322 l~~~~~~ 328 (330)
+.+.|++
T Consensus 989 I~~kY~~ 995 (1452)
T PTZ00297 989 VHSYFSS 995 (1452)
T ss_pred HHHHHHH
Confidence 9999865
No 195
>PRK07868 acyl-CoA synthetase; Validated
Probab=85.04 E-value=5.6 Score=41.37 Aligned_cols=65 Identities=12% Similarity=0.094 Sum_probs=48.5
Q ss_pred HcCCCCCCEEEEECCCCHHHH--HHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPSMY--ELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..++.++|+++..+|.++.+- ..+++++..|+.+ .+.+.++++.+...+++.+++.+...|..+.
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~v-vl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~ 706 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRI-ALSRGLDPDRFVQEVRQYGVTVVSYTWAMLR 706 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEE-EecCCCCHHHHHHHHHHhCCcEEEeHHHHHH
Confidence 457889999999999887653 3345555555554 4556788999999999999999987665443
No 196
>PRK07867 acyl-CoA synthetase; Validated
Probab=85.00 E-value=12 Score=35.81 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=53.0
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..+.. ..+++++|++....|....+ +..++..+..|+.++. .+.++++.+...+++.+++.+..
T Consensus 172 ~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~vt~~~~ 247 (529)
T PRK07867 172 CTHRKVASAGVMLAQ---RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIAL-RRKFSASGFLPDVRRYGATYANY 247 (529)
T ss_pred ecHHHHHHHHHHHHH---hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEe-cCCCCHHHHHHHHHHhCCeEEec
Confidence 788877655554433 45888999999988877544 3344556677877654 45677888888888888888765
Q ss_pred cc
Q 048729 119 DH 120 (330)
Q Consensus 119 ~~ 120 (330)
.+
T Consensus 248 ~p 249 (529)
T PRK07867 248 VG 249 (529)
T ss_pred cH
Confidence 44
No 197
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=85.00 E-value=11 Score=36.09 Aligned_cols=80 Identities=14% Similarity=0.031 Sum_probs=55.4
Q ss_pred ecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecC-CCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN-TRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|++.+...+..+. ...++ ..+|++....|....+ +..+++.+..|+..+..+ ....++.+...+++.+++.+.
T Consensus 194 ~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~ 270 (542)
T PRK07786 194 LTHANLTGQAMTCL---RTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIF 270 (542)
T ss_pred hhHHHHHHHHHHHH---HhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEE
Confidence 67777755444433 34466 5677777777765432 456678888999887654 356788999999999999988
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
..|.++
T Consensus 271 ~~P~~l 276 (542)
T PRK07786 271 LVPAQW 276 (542)
T ss_pred ehHHHH
Confidence 876544
No 198
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=84.87 E-value=9.6 Score=36.03 Aligned_cols=65 Identities=15% Similarity=0.135 Sum_probs=48.0
Q ss_pred HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..++.++|++....|.++.. ....+..+..|+..+.. +..+++.+...+++.++++++..|..+.
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 255 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFI 255 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHH
Confidence 56889999999888876432 22334456778877654 4578899999999999999988876554
No 199
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=84.83 E-value=11 Score=35.99 Aligned_cols=79 Identities=9% Similarity=0.018 Sum_probs=56.7
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+.... ...+++++|+++...|.++. ++..++..+..|+..+. .+.+++..+...+++.+++.+..
T Consensus 215 ~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~l~~~~vt~~~~ 290 (538)
T TIGR03208 215 HTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-QDIWNPARAAELIRETGVTFTMA 290 (538)
T ss_pred eehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-cCccCHHHHHHHHHHhCCeEEec
Confidence 67776655444333 34578899999999998754 45556777788887764 44677888888999999998876
Q ss_pred cccch
Q 048729 119 DHLHT 123 (330)
Q Consensus 119 ~~~~~ 123 (330)
.|..+
T Consensus 291 ~p~~~ 295 (538)
T TIGR03208 291 STPFL 295 (538)
T ss_pred CHHHH
Confidence 65443
No 200
>PRK06060 acyl-CoA synthetase; Validated
Probab=84.50 E-value=7.3 Score=38.75 Aligned_cols=81 Identities=4% Similarity=-0.111 Sum_probs=56.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..+.. ...++.++|++....+..+.+ ...++..+..|+..+..+....+..+..++++.+++++..
T Consensus 165 ~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~ 242 (705)
T PRK06060 165 HRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYG 242 (705)
T ss_pred EccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEee
Confidence 777777655544322 235788999998888766543 3445677788988877766677788888888888888877
Q ss_pred cccch
Q 048729 119 DHLHT 123 (330)
Q Consensus 119 ~~~~~ 123 (330)
.|.++
T Consensus 243 ~P~~l 247 (705)
T PRK06060 243 VPNFF 247 (705)
T ss_pred HHHHH
Confidence 66544
No 201
>PRK07470 acyl-CoA synthetase; Validated
Probab=84.08 E-value=8.1 Score=36.74 Aligned_cols=85 Identities=18% Similarity=0.084 Sum_probs=55.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecC-CCCCHHHHHHHHHhcCCcEEEEc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN-TRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+|++.+...+......+ ..+..++|++..++|.++.+....+..+..|+..+.++ ...+++.+...+++.+++++...
T Consensus 183 ~s~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 261 (528)
T PRK07470 183 LTHGQMAFVITNHLADL-MPGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTV 261 (528)
T ss_pred EehhhHHHHHHHHHHHh-ccCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEech
Confidence 78877754333211111 12678899999999988665443333445566554443 46788899999999999999887
Q ss_pred ccchHHH
Q 048729 120 HLHTYLL 126 (330)
Q Consensus 120 ~~~~~~~ 126 (330)
|..+..+
T Consensus 262 P~~~~~l 268 (528)
T PRK07470 262 PTILKML 268 (528)
T ss_pred HHHHHHH
Confidence 7665443
No 202
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=83.81 E-value=12 Score=35.79 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=54.5
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+.. .....+++++|++....|.+.. ++..+++.+..|+..+... ..++..+...+++.++++++.
T Consensus 207 ~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (547)
T PRK06087 207 LTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCMLG 282 (547)
T ss_pred EecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEec
Confidence 777777544433 3335688999999998887754 3456677788899887665 457788888888888888765
Q ss_pred c
Q 048729 119 D 119 (330)
Q Consensus 119 ~ 119 (330)
.
T Consensus 283 ~ 283 (547)
T PRK06087 283 A 283 (547)
T ss_pred c
Confidence 3
No 203
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=83.31 E-value=9.3 Score=37.31 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=50.3
Q ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
..+++++|++....+.+... ...+++.+..|+..+..+. ...+..+..++++.+++.+.+.|..+..
T Consensus 272 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~ 343 (625)
T TIGR02188 272 VFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRA 343 (625)
T ss_pred ccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHH
Confidence 45889999998888776432 3456888899998876653 2357888999999999998887765543
No 204
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=83.25 E-value=11 Score=36.96 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=51.4
Q ss_pred HcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchHHH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTYLL 126 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 126 (330)
..+++++|++...++.+... ...+++.+..|+..+..+. ..+++.+..++++.+++.+.+.|..+..+
T Consensus 281 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 353 (637)
T PRK00174 281 VFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRAL 353 (637)
T ss_pred ccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHH
Confidence 35888999998888766443 3457888899998876652 23578899999999999999887665443
No 205
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=82.94 E-value=11 Score=37.35 Aligned_cols=84 Identities=12% Similarity=-0.086 Sum_probs=59.0
Q ss_pred ecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~--~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i 116 (330)
+|++.+...+..+...... .++.++|+++.++|.++-+ ... +.++..|+.+..... ....+...+...+|+++
T Consensus 240 lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~ 316 (660)
T PLN02430 240 LTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIE-EYFFRKGASVGYYHG--DLNALRDDLMELKPTLL 316 (660)
T ss_pred eecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHH-HHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEE
Confidence 7888876665554433322 2578899999999987433 333 445677887655443 45678899999999999
Q ss_pred EEcccchHHHH
Q 048729 117 FVDHLHTYLLL 127 (330)
Q Consensus 117 ~~~~~~~~~~~ 127 (330)
+..|.++..+.
T Consensus 317 ~~vP~~~~~l~ 327 (660)
T PLN02430 317 AGVPRVFERIH 327 (660)
T ss_pred EecHHHHHHHH
Confidence 99998876554
No 206
>PRK07798 acyl-CoA synthetase; Validated
Probab=82.66 E-value=15 Score=34.68 Aligned_cols=80 Identities=13% Similarity=0.092 Sum_probs=54.8
Q ss_pred ecHHHHHHHHHHHHHHHH------HcC------CCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecC-CCCCHHHHHH
Q 048729 41 YTWSETHRRCLQVASSLS------SVG------IQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN-TRLDAHTLSV 106 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~------~~g------~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~-~~~~~~~l~~ 106 (330)
+|++.+...+.....++. ..+ ..+++++....|..+.+ +...++.+..|+.++..+ ...++..+..
T Consensus 183 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 262 (533)
T PRK07798 183 WRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWR 262 (533)
T ss_pred EecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHH
Confidence 777777654444333331 111 26788888888877544 445678888899887665 2667888999
Q ss_pred HHHhcCCcEEEEcc
Q 048729 107 LLQHSESKLVFVDH 120 (330)
Q Consensus 107 ~l~~~~~~~i~~~~ 120 (330)
.+++.+++.+++.+
T Consensus 263 ~i~~~~~t~~~~~~ 276 (533)
T PRK07798 263 TIEREKVNVITIVG 276 (533)
T ss_pred HHHHhCCeEEEech
Confidence 99999999988764
No 207
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=81.97 E-value=7.8 Score=38.19 Aligned_cols=64 Identities=11% Similarity=0.005 Sum_probs=47.6
Q ss_pred HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC--C-CCHHHHHHHHHhcCCcEEEEcccc
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--R-LDAHTLSVLLQHSESKLVFVDHLH 122 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~--~-~~~~~l~~~l~~~~~~~i~~~~~~ 122 (330)
..+++++|++..+.+.+..+...+++.+..|+..+..+. . ..+..+..++++.+++++.+.+.+
T Consensus 300 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~ 366 (652)
T TIGR01217 300 HCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKY 366 (652)
T ss_pred ccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHH
Confidence 468999999998888776544445688899998887752 2 256788888999998887665543
No 208
>PLN02574 4-coumarate--CoA ligase-like
Probab=81.96 E-value=13 Score=35.63 Aligned_cols=83 Identities=11% Similarity=0.001 Sum_probs=56.6
Q ss_pred ecHHHHHHHHHHHHHHHH-HcCCC-CCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLS-SVGIQ-RGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~-~~g~~-~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i 116 (330)
+|++.+...+..+.+... ..+.. ..++++..+|....+ ...+++.+..|+.++..+ ..+++.+...+++.+++.+
T Consensus 218 ~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 296 (560)
T PLN02574 218 LTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR-RFDASDMVKVIDRFKVTHF 296 (560)
T ss_pred EeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec-CCCHHHHHHHHHHcCCeEE
Confidence 888888776666654332 22332 345666677765433 344567778899887654 5778999999999999998
Q ss_pred EEcccchH
Q 048729 117 FVDHLHTY 124 (330)
Q Consensus 117 ~~~~~~~~ 124 (330)
...|..+.
T Consensus 297 ~~~P~~~~ 304 (560)
T PLN02574 297 PVVPPILM 304 (560)
T ss_pred ecCCHHHH
Confidence 87765543
No 209
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=81.80 E-value=14 Score=36.10 Aligned_cols=94 Identities=11% Similarity=-0.097 Sum_probs=60.2
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCC--CCCEEEEECCCCHHH--HHHHHHhhhcCcEEee
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQ--RGHVVSVVAPNVPSM--YELQFGVPMSGAILNN 94 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~--~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~ 94 (330)
.++.+|++. ++ -.+|++.+...+..+...+ ++. .+|+++.++|.++.+ ...++.++..|+.++.
T Consensus 207 ~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~ 283 (614)
T PRK08180 207 GPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF---PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYI 283 (614)
T ss_pred CcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc---cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEE
Confidence 356666653 32 2388888876666555443 332 567888888876543 4556777888988876
Q ss_pred cCCCCCH---HHHHHHHHhcCCcEEEEcccchH
Q 048729 95 INTRLDA---HTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 95 l~~~~~~---~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
.+....+ ..+...+++.+++.++..|..+.
T Consensus 284 ~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~ 316 (614)
T PRK08180 284 DDGKPTPGGFDETLRNLREISPTVYFNVPKGWE 316 (614)
T ss_pred eCCCccchhHHHHHHHHHHhCCcEEechHHHHH
Confidence 5533333 35566778888888887765543
No 210
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=81.15 E-value=13 Score=35.55 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=50.5
Q ss_pred HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
..+++.+|++....|....+ +...+.++..|+.++.....+.++.+...+++.+++++...|..+..
T Consensus 214 ~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 281 (542)
T PRK06018 214 ALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLM 281 (542)
T ss_pred hcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHH
Confidence 56788999999888876443 23345667888887755556778888999999999999888766543
No 211
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=80.81 E-value=8.8 Score=36.48 Aligned_cols=74 Identities=15% Similarity=0.029 Sum_probs=58.8
Q ss_pred ecHHHHHHHHHHHHH-HHHHcCCCCCCEEEEECCCC--HHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVAS-SLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~-~L~~~g~~~gd~V~~~~~~~--~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|+.... +.+. .....|+++.|+|-+.+|.. ...++.+-+|+..|++++ +...+|+...-.-+.+++++++.
T Consensus 262 ith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 262 ITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 6655544 3444 44467999999999999975 455888899999999986 88899999999999999999887
Q ss_pred Ec
Q 048729 118 VD 119 (330)
Q Consensus 118 ~~ 119 (330)
.-
T Consensus 337 YI 338 (649)
T KOG1179|consen 337 YI 338 (649)
T ss_pred hH
Confidence 43
No 212
>PRK06145 acyl-CoA synthetase; Validated
Probab=79.51 E-value=22 Score=33.33 Aligned_cols=81 Identities=11% Similarity=0.143 Sum_probs=57.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+. ......++..+|++....|....+ ....++.+..|+..+.. +..++..+...+++.+++.+..
T Consensus 169 ~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 244 (497)
T PRK06145 169 HSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCAWM 244 (497)
T ss_pred EecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEEEe
Confidence 78887764433 333456899999999998875433 23345667788877654 4578889999999999999888
Q ss_pred cccchHH
Q 048729 119 DHLHTYL 125 (330)
Q Consensus 119 ~~~~~~~ 125 (330)
.|..+..
T Consensus 245 ~P~~~~~ 251 (497)
T PRK06145 245 APVMLSR 251 (497)
T ss_pred hHHHHHH
Confidence 7765543
No 213
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=79.43 E-value=12 Score=36.59 Aligned_cols=66 Identities=11% Similarity=0.001 Sum_probs=49.4
Q ss_pred HcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..+++++|++....+.+.. ....+++.+..|+..+..+. ...+..+..++++.+++++.+.|..+.
T Consensus 269 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~ 339 (629)
T PRK10524 269 IFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIR 339 (629)
T ss_pred hcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHH
Confidence 4588999999888887643 24556888899998876653 345778888999999998888765543
No 214
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=79.11 E-value=20 Score=33.87 Aligned_cols=83 Identities=10% Similarity=0.018 Sum_probs=58.7
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+|++.+..... ...+ ...+.++|++..++|.... ....+++++..|+..+..+ ..+++.+.+.+++.+++++.
T Consensus 192 ~~t~~~l~~~~~-~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 267 (517)
T PRK08008 192 VITHYNLRFAGY-YSAW--QCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLE-KYSARAFWGQVCKYRATITE 267 (517)
T ss_pred EEehHHHHHHHH-HHhh--hcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcc-ccCHHHHHHHHHHcCCcEEe
Confidence 388888754321 1111 3357889999999886533 3455688888899887655 56788889999999999998
Q ss_pred EcccchHHH
Q 048729 118 VDHLHTYLL 126 (330)
Q Consensus 118 ~~~~~~~~~ 126 (330)
..|..+..+
T Consensus 268 ~~P~~~~~l 276 (517)
T PRK08008 268 CIPMMIRTL 276 (517)
T ss_pred chHHHHHHH
Confidence 877766443
No 215
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.79 E-value=18 Score=35.46 Aligned_cols=79 Identities=13% Similarity=0.001 Sum_probs=50.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC-CC--CHHHHHHHHHhcCC---
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT-RL--DAHTLSVLLQHSES--- 113 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~-~~--~~~~l~~~l~~~~~--- 113 (330)
+|++.+...+..+.. ..++.++|+++.++|.++.+ +...+.++..|+..+.+++ .+ .+..+...+.+.+.
T Consensus 200 ~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 276 (631)
T PRK07769 200 ITHLNLPTNVLQVID---ALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTG 276 (631)
T ss_pred EcHHHHHHHHHHHHH---HcCCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccC
Confidence 888888766555443 45788999999999987543 2233444566887776654 23 56666667766654
Q ss_pred cEEEEcccc
Q 048729 114 KLVFVDHLH 122 (330)
Q Consensus 114 ~~i~~~~~~ 122 (330)
+.+...|.+
T Consensus 277 ~~~~~~p~~ 285 (631)
T PRK07769 277 GTFSAAPNF 285 (631)
T ss_pred ceEeeCCch
Confidence 445554443
No 216
>PRK06178 acyl-CoA synthetase; Validated
Probab=77.75 E-value=24 Score=33.89 Aligned_cols=77 Identities=14% Similarity=-0.048 Sum_probs=54.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+...... ...++++|++..+.|....+ ...+++.+..|+..+..+ ...++.+...+++.+++.+..
T Consensus 229 ~t~~~~~~~~~~~~~~--~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~ 305 (567)
T PRK06178 229 HTQRDMVYTAAAAYAV--AVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVM 305 (567)
T ss_pred eccHHHHHHHHHHHHH--hccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEec
Confidence 7887766544443322 24668899998888876443 235677788899887665 567889999999999988766
Q ss_pred cc
Q 048729 119 DH 120 (330)
Q Consensus 119 ~~ 120 (330)
.+
T Consensus 306 ~~ 307 (567)
T PRK06178 306 LV 307 (567)
T ss_pred cH
Confidence 53
No 217
>PRK13391 acyl-CoA synthetase; Provisional
Probab=76.87 E-value=15 Score=34.71 Aligned_cols=65 Identities=15% Similarity=0.021 Sum_probs=49.0
Q ss_pred HcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..++++++++....|..+.+ +...++++..|+..+..+ ...++.+...+++.+++.+...|..+.
T Consensus 194 ~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~ 259 (511)
T PRK13391 194 LWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFS 259 (511)
T ss_pred hcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHH
Confidence 55778888888888765443 344577888898887665 467888899999999999888776543
No 218
>PLN02479 acetate-CoA ligase
Probab=76.47 E-value=27 Score=33.58 Aligned_cols=83 Identities=10% Similarity=0.023 Sum_probs=53.6
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+.... ...++.++|+.....|....+ ...++..+..|..+ .+ ...+++.+...+++.++++++.
T Consensus 215 ~sh~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~l~~~~~t~~~~ 289 (567)
T PLN02479 215 LHHRGAYLMALSNA---LIWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNI-CL-RQVTAKAIYSAIANYGVTHFCA 289 (567)
T ss_pred eccHHHHHHHHHHH---hhcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceE-ec-cCCCHHHHHHHHHHcCCeEEEe
Confidence 77776644332222 244678899887777765332 22222333445444 34 3578899999999999999999
Q ss_pred cccchHHHHH
Q 048729 119 DHLHTYLLLE 128 (330)
Q Consensus 119 ~~~~~~~~~~ 128 (330)
.|..+..+..
T Consensus 290 ~P~~~~~l~~ 299 (567)
T PLN02479 290 APVVLNTIVN 299 (567)
T ss_pred cHHHHHHHHh
Confidence 9888876543
No 219
>PRK07514 malonyl-CoA synthase; Validated
Probab=74.92 E-value=25 Score=33.06 Aligned_cols=76 Identities=9% Similarity=0.123 Sum_probs=50.1
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+..+.. ..+++++|++....|.... +...+++.+..|+.++..+ ...++.+...+. +++.++.
T Consensus 176 ~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~--~~t~~~~ 249 (504)
T PRK07514 176 LSHGNLLSNALTLVD---YWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLP-KFDPDAVLALMP--RATVMMG 249 (504)
T ss_pred EecHHHHHHHHHHHH---HhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECC-CCCHHHHHHHHH--hheeeec
Confidence 788877766555443 4578899999888887533 3445678888899887654 456666666663 4555555
Q ss_pred cccc
Q 048729 119 DHLH 122 (330)
Q Consensus 119 ~~~~ 122 (330)
.|.+
T Consensus 250 ~P~~ 253 (504)
T PRK07514 250 VPTF 253 (504)
T ss_pred HHHH
Confidence 4433
No 220
>PRK05857 acyl-CoA synthetase; Validated
Probab=74.78 E-value=16 Score=34.91 Aligned_cols=83 Identities=10% Similarity=-0.071 Sum_probs=54.0
Q ss_pred ecHHHHHHHHHHHHHH-HHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASS-LSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~-L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+......+... +...+...+|++....|....+ +...++.+..|+..+. . ...+..+..++++++++.+..
T Consensus 189 ~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~-~~~~~~~~~~i~~~~it~~~~ 266 (540)
T PRK05857 189 LANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-G-GENTTSLLEILTTNAVATTCL 266 (540)
T ss_pred EechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEe-c-CCChhHHHHHHHhcCcceEEe
Confidence 7887776544332221 1123556788888888765432 3345777788887764 2 345678999999999999888
Q ss_pred cccchHH
Q 048729 119 DHLHTYL 125 (330)
Q Consensus 119 ~~~~~~~ 125 (330)
.|.++..
T Consensus 267 ~P~~~~~ 273 (540)
T PRK05857 267 VPTLLSK 273 (540)
T ss_pred ChHHHHH
Confidence 7765543
No 221
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=74.23 E-value=23 Score=34.92 Aligned_cols=66 Identities=8% Similarity=-0.081 Sum_probs=46.7
Q ss_pred HcCCCCCCEEEEECCCCHH-HHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 59 SVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~-~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
..+..++|++....+.+.. +...+++.+..|+..++.+. ...++.+.+++++.+++.+.+.|..+.
T Consensus 290 ~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~ 361 (647)
T PTZ00237 290 IIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIR 361 (647)
T ss_pred hcCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHH
Confidence 3466778888777775422 23356888899999887653 223678888999999999888775443
No 222
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.16 E-value=29 Score=33.08 Aligned_cols=78 Identities=12% Similarity=0.021 Sum_probs=51.9
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCC-CEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCC---CCHHHHHHHHHhcCC
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRG-HVVSVVAPNVPS--MYELQFGVPMSGAILNNINTR---LDAHTLSVLLQHSES 113 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~g-d~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~---~~~~~l~~~l~~~~~ 113 (330)
.+|++.+...+.... ...++.++ |++...+|.... +...+++.+..|+.++.+.+. ..+..+..++++.++
T Consensus 171 ~~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~ 247 (545)
T PRK07768 171 QITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRG 247 (545)
T ss_pred EEcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCC
Confidence 388888866544433 34577776 899888887643 344566778889988776542 245566777888888
Q ss_pred cEEEEcc
Q 048729 114 KLVFVDH 120 (330)
Q Consensus 114 ~~i~~~~ 120 (330)
+.+.+.+
T Consensus 248 ~~~~~~~ 254 (545)
T PRK07768 248 TMTAAPN 254 (545)
T ss_pred EEEECch
Confidence 7764433
No 223
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=73.79 E-value=21 Score=33.54 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=40.9
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecC-CCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN-TRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
.+|||.|++=.|..+....+ |-.+..-.+.+|++ ..+.++.+...++..+++++++.|.+.
T Consensus 176 ~~pGd~v~vE~PtY~~~~~~-~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQA-LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHHHHHH-HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 34777777766655544433 33333334444444 478899999999999999999988654
No 224
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=73.39 E-value=11 Score=36.49 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=38.7
Q ss_pred eEEeCceEEEe----cCceEEEEecCCCeEEeCCeecCHHHHHHHHhcC
Q 048729 201 WFYTGDIGVMH----ADGYVEIKDRSKDVIISGGENICSAEVESVLYSI 245 (330)
Q Consensus 201 ~~~TGD~~~~~----~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~ 245 (330)
.|+.||++++. ..-.+.|++|.+.+..+.|++.+-.++..++.+.
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 38999998873 4467999999999999999999999998888664
No 225
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=73.16 E-value=25 Score=34.23 Aligned_cols=79 Identities=13% Similarity=0.080 Sum_probs=48.2
Q ss_pred eecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCC-CC--CHHHHHHHHH--hc
Q 048729 40 TYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINT-RL--DAHTLSVLLQ--HS 111 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~-~~--~~~~l~~~l~--~~ 111 (330)
.+|++.+...+..+.. ..+ +.++|+++.++|..+.+ ...+++++..|.++ .+.+ .+ .+..+...+. ..
T Consensus 212 ~~sh~~l~~~~~~~~~---~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~-~~~~~~~~~~p~~~~~~i~~~~~ 287 (612)
T PRK12476 212 EITHRAVGTNLVQMIL---SIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHST-LMSPTAFVRRPQRWIKALSEGSR 287 (612)
T ss_pred EeeHHHHHHHHHHHHH---HhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEE-EECHHHHHHHHHHHHHHHhhhcc
Confidence 3888887655544443 346 67899999999987543 33445555545444 4443 22 5667777774 36
Q ss_pred CCcEEEEcccc
Q 048729 112 ESKLVFVDHLH 122 (330)
Q Consensus 112 ~~~~i~~~~~~ 122 (330)
+++.+...|.+
T Consensus 288 ~~t~~~~~P~~ 298 (612)
T PRK12476 288 TGRVVTAAPNF 298 (612)
T ss_pred CCeEEEeCCcH
Confidence 66776666544
No 226
>PRK09274 peptide synthase; Provisional
Probab=72.08 E-value=34 Score=32.72 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=51.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecC------CCCCHHHHHHHHHhcCCc
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN------TRLDAHTLSVLLQHSESK 114 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~------~~~~~~~l~~~l~~~~~~ 114 (330)
+|++.+...+..+.. ..++.++|++..+.|.. .+++. ..|+..+... ....++.+...+++.+++
T Consensus 194 ~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~-----~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt 264 (552)
T PRK09274 194 YTHGMFEAQIEALRE---DYGIEPGEIDLPTFPLF-----ALFGP-ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVT 264 (552)
T ss_pred ecHHHHHHHHHHHHH---HhCCCCCceeeeccCHH-----Hhhhh-hhCCeEEecCcccccccccCHHHHHHHHHHcCCe
Confidence 888888766665544 34788999888777643 12232 3466554433 135678899999999999
Q ss_pred EEEEcccchHH
Q 048729 115 LVFVDHLHTYL 125 (330)
Q Consensus 115 ~i~~~~~~~~~ 125 (330)
.++..|.++..
T Consensus 265 ~~~~~P~~~~~ 275 (552)
T PRK09274 265 NLFGSPALLER 275 (552)
T ss_pred EEeccHHHHHH
Confidence 99887765543
No 227
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=71.37 E-value=14 Score=35.89 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=38.3
Q ss_pred eEEeCceEEEe----cCceEEEEecCCCeEEeCCeecCHHHHHHHHhcC
Q 048729 201 WFYTGDIGVMH----ADGYVEIKDRSKDVIISGGENICSAEVESVLYSI 245 (330)
Q Consensus 201 ~~~TGD~~~~~----~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~ 245 (330)
.|+.||+++.. ..-.+.|++|.+-+..+.|++.+-.++..++.+.
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 38999999874 3467999999999999999999999988777663
No 228
>PRK09088 acyl-CoA synthetase; Validated
Probab=70.63 E-value=59 Score=30.40 Aligned_cols=77 Identities=9% Similarity=-0.075 Sum_probs=48.0
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHH--hcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQ--HSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~--~~~~~~i 116 (330)
+|++.+...+..+.. ...++++|++....|.... ++..+++++..|+..+..+ ...+......+. +.+++.+
T Consensus 155 ~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~t~~ 230 (488)
T PRK09088 155 LSERNLQQTAHNFGV---LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN-GFEPKRTLGRLGDPALGITHY 230 (488)
T ss_pred EehHHHHHHHHHHHH---hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC-CCCHHHHHHHHHhhccCCcEE
Confidence 788877655444433 3357789999988887643 3445677888888886544 445555444443 3556666
Q ss_pred EEccc
Q 048729 117 FVDHL 121 (330)
Q Consensus 117 ~~~~~ 121 (330)
...|.
T Consensus 231 ~~~P~ 235 (488)
T PRK09088 231 FCVPQ 235 (488)
T ss_pred eeHHH
Confidence 55443
No 229
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=70.43 E-value=44 Score=32.08 Aligned_cols=84 Identities=18% Similarity=0.050 Sum_probs=52.9
Q ss_pred ecHHHHHHHHHHHHHHHHHcC------CCCCCEE-EEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhc
Q 048729 41 YTWSETHRRCLQVASSLSSVG------IQRGHVV-SVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHS 111 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g------~~~gd~V-~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~ 111 (330)
+|++.+...+..+.+.+...+ +..++.+ ....|....+ ....+.++..|...+..........+...+++.
T Consensus 227 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 306 (562)
T PRK12492 227 LTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKW 306 (562)
T ss_pred EechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHh
Confidence 788888777777777665333 4556544 4445544333 334566677788666555445677777788888
Q ss_pred CCcEEEEcccchH
Q 048729 112 ESKLVFVDHLHTY 124 (330)
Q Consensus 112 ~~~~i~~~~~~~~ 124 (330)
++++++..|..+.
T Consensus 307 ~~t~~~~~p~~~~ 319 (562)
T PRK12492 307 RFSALLGLNTLFV 319 (562)
T ss_pred CCceeeCcHHHHH
Confidence 8887776665443
No 230
>PLN03102 acyl-activating enzyme; Provisional
Probab=70.19 E-value=38 Score=32.76 Aligned_cols=66 Identities=9% Similarity=0.046 Sum_probs=45.9
Q ss_pred cCCCCCCEEEEECCCCHH-HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHHH
Q 048729 60 VGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYLL 126 (330)
Q Consensus 60 ~g~~~gd~V~~~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 126 (330)
.+.+..++++...|..+. .+...++++..|+..+.+. ..+...+...+++++++.+...|..+..+
T Consensus 222 ~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 288 (579)
T PLN03102 222 WEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMR-HVTAPEIYKNIEMHNVTHMCCVPTVFNIL 288 (579)
T ss_pred cCCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeec-cCChHHHHHHHHHcCCeEEEeChHHHHHH
Confidence 355667777766665432 2334466777888777665 45677899999999999999988766443
No 231
>PRK08162 acyl-CoA synthetase; Validated
Probab=69.90 E-value=48 Score=31.59 Aligned_cols=81 Identities=10% Similarity=-0.005 Sum_probs=50.9
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|++.+...+... ....+++.+|++....|....+ ...++..+ .|+..+.+. ...++.+...+++.+++++..
T Consensus 202 ~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~-~~g~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 276 (545)
T PRK08162 202 YHHRGAYLNALSN---ILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAA-RAGTNVCLR-KVDPKLIFDLIREHGVTHYCG 276 (545)
T ss_pred EecHHHHHHHHHH---HHhcCCCCCCeeEeccCcHhhhhHHHHHHHHH-HccEEEEeC-CCCHHHHHHHHHHcCCeEEEe
Confidence 6766554333222 2345778888887777764332 23333334 444444443 477899999999999999998
Q ss_pred cccchHHH
Q 048729 119 DHLHTYLL 126 (330)
Q Consensus 119 ~~~~~~~~ 126 (330)
.|.++..+
T Consensus 277 ~P~~~~~l 284 (545)
T PRK08162 277 APIVLSAL 284 (545)
T ss_pred chHHHHHH
Confidence 88766543
No 232
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=69.14 E-value=30 Score=33.27 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=54.2
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|.+-+.....+.. ....+...|+.+...|..+- +...+.+++..|... .....++++.+...+++++++++..
T Consensus 204 lsHr~~~~~~~~~~---~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~i-i~~~~f~~~~~~~~i~kykvt~~~~ 279 (537)
T KOG1176|consen 204 LSHRNLIANTLSIK---IGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTI-ICLRKFDAELFLDLIEKYKVTHLFL 279 (537)
T ss_pred EecHHHHHHHHHhh---hcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceE-EECCCCCHHHHHHHHHHhCEEEEEc
Confidence 67665544433322 22345557889999997643 344444455555555 4666779999999999999999998
Q ss_pred cccchHHH
Q 048729 119 DHLHTYLL 126 (330)
Q Consensus 119 ~~~~~~~~ 126 (330)
.|.++..+
T Consensus 280 vP~~~~~l 287 (537)
T KOG1176|consen 280 VPPVLNML 287 (537)
T ss_pred ChHHHHHH
Confidence 77544433
No 233
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.49 E-value=35 Score=32.86 Aligned_cols=83 Identities=10% Similarity=-0.086 Sum_probs=55.9
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQ-RGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~-~gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|.+.+...+.....++. ++. .+|++....|....+ ...++..+..|+.++..+ ...++.+...+++.+++++.
T Consensus 239 ~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 315 (573)
T PRK05605 239 LTHRNLFANAAQGKAWVP--GLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLP 315 (573)
T ss_pred EecHHHHHHHHHHHhhcc--ccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEE
Confidence 788877665554433332 233 467888887765333 344556678888877654 45788899999999999998
Q ss_pred EcccchHHH
Q 048729 118 VDHLHTYLL 126 (330)
Q Consensus 118 ~~~~~~~~~ 126 (330)
+.|..+..+
T Consensus 316 ~~P~~~~~l 324 (573)
T PRK05605 316 GVPPLYEKI 324 (573)
T ss_pred chHHHHHHH
Confidence 887665443
No 234
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=67.96 E-value=15 Score=35.78 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=52.3
Q ss_pred HcCCCCCCEEEEECCCC--HHHHHHHHHhhhcCcEEeecCC-CCCHHHHHHHHHhcCCcEEEEcccchHHHHH
Q 048729 59 SVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINT-RLDAHTLSVLLQHSESKLVFVDHLHTYLLLE 128 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~--~~~~~~~la~~~~G~~~~~l~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 128 (330)
..+++++|+........ ......+++.+..|++.+..+. ...+..+..++.+++++.+.+.|..++.+..
T Consensus 275 ~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~ 347 (626)
T KOG1175|consen 275 HFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRR 347 (626)
T ss_pred eccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHH
Confidence 45788898877777665 3345566888888988876653 2278888999999999999998887775543
No 235
>PRK12582 acyl-CoA synthetase; Provisional
Probab=67.27 E-value=44 Score=32.69 Aligned_cols=83 Identities=11% Similarity=-0.150 Sum_probs=53.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCC---CCEEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCH---HHHHHHHHhcC
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQR---GHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDA---HTLSVLLQHSE 112 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~---gd~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~---~~l~~~l~~~~ 112 (330)
+|++.+...+......+ +..+ +|++..++|.++.+ ...+++++..|+.++..+....+ ..+...+++.+
T Consensus 240 ~th~~l~~~~~~~~~~~---~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~ 316 (624)
T PRK12582 240 NTQRMMCANIAMQEQLR---PREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREIS 316 (624)
T ss_pred eeHHHHHHHHHHHHHhc---cccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcC
Confidence 78887766554443322 3333 57888888876543 44567778889888765433333 34556677889
Q ss_pred CcEEEEcccchHHH
Q 048729 113 SKLVFVDHLHTYLL 126 (330)
Q Consensus 113 ~~~i~~~~~~~~~~ 126 (330)
+++++..|..+..+
T Consensus 317 ~t~~~~vP~~~~~l 330 (624)
T PRK12582 317 PTVYGNVPAGYAML 330 (624)
T ss_pred CeEEeccCHHHHHH
Confidence 99988888766544
No 236
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=65.91 E-value=20 Score=32.46 Aligned_cols=64 Identities=20% Similarity=0.266 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEE
Q 048729 51 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 51 ~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~ 118 (330)
..+.-.|..+|+++||.|++-.-..+ ...-+++.+|+.++.++- .++++.+...+.... +.|+.
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~t~~---~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAYTFP---ATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESSS-T---HHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHHhcCCCcCceEecCCCcch---HHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 34455566789999999988754444 445677889999988863 566788888877554 55554
No 237
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=65.46 E-value=30 Score=34.46 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=55.2
Q ss_pred ecHHHHHHHHHHHHHHHH-HcC-CCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHH-------HHHh
Q 048729 41 YTWSETHRRCLQVASSLS-SVG-IQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSV-------LLQH 110 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~-~~g-~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~-------~l~~ 110 (330)
+|++.+...+..+..++. ..+ +.++|+++.++|.++.+ ......++..|+.+... ++..+.. .++.
T Consensus 284 lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~----~~~~l~~~~~~~~~~l~~ 359 (700)
T PTZ00216 284 HTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG----SPRTLTDTFARPHGDLTE 359 (700)
T ss_pred EEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC----CHHHhhhhhccccchHHH
Confidence 899999887777766654 223 47899999999977433 22234445667765432 2333333 5788
Q ss_pred cCCcEEEEcccchHHHH
Q 048729 111 SESKLVFVDHLHTYLLL 127 (330)
Q Consensus 111 ~~~~~i~~~~~~~~~~~ 127 (330)
.+|++++..|.++..+.
T Consensus 360 ~~pT~~~~vP~~~~~l~ 376 (700)
T PTZ00216 360 FRPVFLIGVPRIFDTIK 376 (700)
T ss_pred cCCcEEEechHHHHHHH
Confidence 99999999998776553
No 238
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=65.25 E-value=68 Score=30.77 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=50.4
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCC-EEEEECCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGH-VVSVVAPNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd-~V~~~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
+|++.+...+......+ .+..+++ ++....|....+ ...++..+..|+..+..+ ..+++.+...+++.+++++.
T Consensus 226 ~s~~~l~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 302 (563)
T PRK06710 226 LTHKNLVSNTLMGVQWL--YNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFP 302 (563)
T ss_pred EehHHHHHHHHHHHhhc--cCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEe
Confidence 78888754433333322 3445555 555556644332 233455677888887654 56788888999999999988
Q ss_pred Ecccch
Q 048729 118 VDHLHT 123 (330)
Q Consensus 118 ~~~~~~ 123 (330)
..|..+
T Consensus 303 ~~P~~~ 308 (563)
T PRK06710 303 GAPTIY 308 (563)
T ss_pred ccHHHH
Confidence 766543
No 239
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.66 E-value=62 Score=30.99 Aligned_cols=81 Identities=10% Similarity=-0.096 Sum_probs=45.8
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+|+..+...+......+.......++.+....|... ......+..+..|+..+..........+...+++++++.+..
T Consensus 226 ~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 305 (560)
T PRK08974 226 LTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITG 305 (560)
T ss_pred EchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcC
Confidence 788888765554443333222234556666666543 333334555667776554443455666666777777776665
Q ss_pred ccc
Q 048729 119 DHL 121 (330)
Q Consensus 119 ~~~ 121 (330)
.+.
T Consensus 306 ~p~ 308 (560)
T PRK08974 306 VNT 308 (560)
T ss_pred cHH
Confidence 543
No 240
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.58 E-value=70 Score=30.72 Aligned_cols=94 Identities=11% Similarity=-0.015 Sum_probs=55.6
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCC-EEEEECCCCHH--HHHHHHHhhhcCcEEeec
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGH-VVSVVAPNVPS--MYELQFGVPMSGAILNNI 95 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd-~V~~~~~~~~~--~~~~~la~~~~G~~~~~l 95 (330)
.++.+|++. ++ -.+|...+...+......+ ...+..++ .+...+|.... +...+++.+..|...+..
T Consensus 205 ~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~ 283 (562)
T PRK05677 205 QADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALM-GSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILI 283 (562)
T ss_pred CccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHh-ccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 356667663 22 1277777765554444433 22345454 44555554432 334456677788877666
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEcccc
Q 048729 96 NTRLDAHTLSVLLQHSESKLVFVDHLH 122 (330)
Q Consensus 96 ~~~~~~~~l~~~l~~~~~~~i~~~~~~ 122 (330)
+....+..+...+++.+++.++..+..
T Consensus 284 ~~~~~~~~~~~~i~~~~~t~~~~~p~~ 310 (562)
T PRK05677 284 SNPRDLPAMVKELGKWKFSGFVGLNTL 310 (562)
T ss_pred cCcccHHHHHHHHHHcCceEEecHHHH
Confidence 655677788888888888877665543
No 241
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=63.65 E-value=35 Score=32.68 Aligned_cols=81 Identities=14% Similarity=0.031 Sum_probs=48.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEE-CCCCHHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSSVG-IQRGHVVSVV-APNVPSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~-~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i 116 (330)
+|+..+...+.....++...+ +++++.+.+. .+....+ ....+..+..|...+.+........+...+++++++.+
T Consensus 228 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~ 307 (560)
T PRK08751 228 LTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAF 307 (560)
T ss_pred EccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEe
Confidence 788888777777666664333 6677655444 4433222 22234445566655555545567777788888877776
Q ss_pred EEccc
Q 048729 117 FVDHL 121 (330)
Q Consensus 117 ~~~~~ 121 (330)
...+.
T Consensus 308 ~~~p~ 312 (560)
T PRK08751 308 TGVNT 312 (560)
T ss_pred cChHH
Confidence 55443
No 242
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=63.44 E-value=24 Score=32.10 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEE
Q 048729 50 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 50 ~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+..+.-.|+++++++||-|.+ .+..|+...=+++..|+.++.++- +++++.+...+... .+.|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 344445566678999996654 345566666788899999998873 56788999888876 666654
No 243
>PRK09192 acyl-CoA synthetase; Validated
Probab=61.49 E-value=56 Score=31.51 Aligned_cols=77 Identities=6% Similarity=0.055 Sum_probs=52.2
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCC-C--CCHHHHHHHHHhcCCc
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINT-R--LDAHTLSVLLQHSESK 114 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~-~--~~~~~l~~~l~~~~~~ 114 (330)
.+|++.+...+...... ..++.++|++..+.|..+ .++..+++.+..|+.++.+.. . ..+..+..++.+.+++
T Consensus 195 ~~sh~~~~~~~~~~~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t 272 (579)
T PRK09192 195 IITHRALMANLRAISHD--GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGT 272 (579)
T ss_pred EeeHHHHHHHHHHHHhh--cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcE
Confidence 37888887666554431 457889999999999864 445567777888887754442 1 2356677777777776
Q ss_pred EEEE
Q 048729 115 LVFV 118 (330)
Q Consensus 115 ~i~~ 118 (330)
+.+.
T Consensus 273 ~~~~ 276 (579)
T PRK09192 273 ISYS 276 (579)
T ss_pred EEeC
Confidence 5554
No 244
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=60.94 E-value=75 Score=29.48 Aligned_cols=54 Identities=13% Similarity=-0.041 Sum_probs=37.5
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecC
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~ 96 (330)
.+|++.+...+..+.. ..+++++|+++...|....+ ...+++.+..|+.++..+
T Consensus 154 ~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~ 208 (458)
T PRK09029 154 VHTAQAHLASAEGVLS---LMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRD 208 (458)
T ss_pred EEeHHHHHHHHHHHhh---cCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCC
Confidence 3888888766555443 45788999999988876443 334456678888877655
No 245
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=60.06 E-value=33 Score=27.33 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcC
Q 048729 235 SAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARL 294 (330)
Q Consensus 235 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l 294 (330)
...|++.+.+.++|.++.|+...+. +++.|.+... . ...+++++.+.+.+
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~~-----a~Vav~~~~~-~----~~~~~i~~~V~~~v 126 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDDN-----AYVAVDLDFN-R----FNTKKIKKKVEKAV 126 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECCE-----EEEEEEeccc-c----cchhHHHHHHHHHH
Confidence 3578888999999999999988663 4455555522 2 34455565555554
No 246
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=58.39 E-value=97 Score=29.51 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=50.3
Q ss_pred ecHHHHHHHHHHHHHHHHHcCC--CCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSSVGI--QRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~--~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i 116 (330)
+|.+.+.........+....+. ...+++....|... .+...+++.+..|+..+.. ....++.+...+++.+++++
T Consensus 212 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 290 (541)
T TIGR03205 212 LTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLH-QRFDVAAVFRDIEEKRATVF 290 (541)
T ss_pred EeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEec-CCCCHHHHHHHHHHcCCeEe
Confidence 7777765433221111111122 23467777777653 3345567788888877654 45678888889999998888
Q ss_pred EEcccch
Q 048729 117 FVDHLHT 123 (330)
Q Consensus 117 ~~~~~~~ 123 (330)
...|..+
T Consensus 291 ~~~P~~~ 297 (541)
T TIGR03205 291 PGVPTMW 297 (541)
T ss_pred echHHHH
Confidence 7766544
No 247
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=58.33 E-value=57 Score=29.60 Aligned_cols=56 Identities=14% Similarity=0.187 Sum_probs=38.6
Q ss_pred HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEE
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~ 118 (330)
..++++||.|++-.+..+.+. .++...|+.++.++. .++.+.+...++. ++++++.
T Consensus 65 ~~~~~~Gd~Viv~~~t~~~~~---~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 65 LLDIQPGDEVIMPSYTFVSTA---NAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HhCCCCCCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 447789999988777665443 445677888777753 2567888887765 5676654
No 248
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=56.68 E-value=1.2e+02 Score=25.52 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=44.7
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCe---ecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCC
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGE---NICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKP 281 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~---~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 281 (330)
|++.+.++||.+.+.|.. +...|. ++.-..++..+...+ .+.++++.+++ ...++.| ..... .
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~~--k~~I~vF--tDp~C-----p 120 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQE--KHVITVF--TDITC-----G 120 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCCC--CEEEEEE--ECCCC-----h
Confidence 346778888888888865 333332 333333444455555 44555554432 2223333 33332 3
Q ss_pred CHHHHHHHHHhcCCCCCCCceEEEccCCCCC
Q 048729 282 TEKEIIEYCRARLPRYMVPRKVVFSEELPKT 312 (330)
Q Consensus 282 ~~~~l~~~l~~~l~~~~~p~~~~~v~~lP~t 312 (330)
-++.+.+.+.+.. ... ..+.++ .+|+.
T Consensus 121 yCkkl~~~l~~~~-~~~--v~v~~~-~~P~~ 147 (232)
T PRK10877 121 YCHKLHEQMKDYN-ALG--ITVRYL-AFPRQ 147 (232)
T ss_pred HHHHHHHHHHHHh-cCC--eEEEEE-eccCC
Confidence 4566666665532 222 234443 47764
No 249
>PRK05850 acyl-CoA synthetase; Validated
Probab=56.06 E-value=97 Score=29.82 Aligned_cols=76 Identities=9% Similarity=-0.092 Sum_probs=51.2
Q ss_pred ecHHHHHHHHHHHHHHHHH---cCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCC---CCHHHHHHHHHhcC
Q 048729 41 YTWSETHRRCLQVASSLSS---VGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTR---LDAHTLSVLLQHSE 112 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~---~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~---~~~~~l~~~l~~~~ 112 (330)
+|++.+...+..+...+.. ....++|++..+.|..+ .++..+++++..|+..+..++. ..+..+..++++.+
T Consensus 180 ~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~ 259 (578)
T PRK05850 180 VSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNP 259 (578)
T ss_pred EeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcC
Confidence 7888887766665543321 12456889998888764 4456678889999988776642 24667777777777
Q ss_pred CcEE
Q 048729 113 SKLV 116 (330)
Q Consensus 113 ~~~i 116 (330)
+++.
T Consensus 260 ~~~~ 263 (578)
T PRK05850 260 HAFS 263 (578)
T ss_pred CeEE
Confidence 6543
No 250
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=56.02 E-value=80 Score=29.45 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=41.1
Q ss_pred cCCCcEEEe-CC--------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecC
Q 048729 28 YTDCPSLVY-NN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN 96 (330)
Q Consensus 28 ~p~~~a~~~-~~--------~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~ 96 (330)
.++.++++. ++ -.+|++.+...+..++..+ ++++. ++..++|.++.+ +..++.++..|+.++..+
T Consensus 118 ~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~---~~~~~-~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (452)
T PRK07445 118 NLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYF---QLQQV-NSFCVLPLYHVSGLMQFMRSFLTGGKLVILP 192 (452)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHh---cCCCC-ceEeccCchhhhhHHHHHHHHHcCCeEEEcC
Confidence 456666654 32 1378888877666665554 55543 566777776543 445677788898887665
No 251
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.96 E-value=56 Score=29.75 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=37.1
Q ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEE
Q 048729 57 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 57 L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+...++++||.|++..+..+.+ ..++...|+.++.++. ..+.+.+...++. ++++++.
T Consensus 63 l~al~~~pGd~Viv~~~t~~~~---~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYTFVST---ANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3445789999988866655443 3445677887777653 2456677776653 5666653
No 252
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=53.40 E-value=69 Score=31.93 Aligned_cols=85 Identities=8% Similarity=-0.057 Sum_probs=53.4
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCC-----C--HHHHHHHHHhcC
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRL-----D--AHTLSVLLQHSE 112 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~-----~--~~~l~~~l~~~~ 112 (330)
+|++.+...+..+...+ .++.++|+++.++|..+.+ ....+.++..|+....-.+.. . +......++..+
T Consensus 270 lth~~l~~~~~~~~~~~--~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~ 347 (696)
T PLN02387 270 MTHGNIVATVAGVMTVV--PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALK 347 (696)
T ss_pred EEcHHHHHHHHHHHhhc--CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhC
Confidence 89888876666554432 3678899999999987544 222233445555443222110 0 122345688899
Q ss_pred CcEEEEcccchHHHH
Q 048729 113 SKLVFVDHLHTYLLL 127 (330)
Q Consensus 113 ~~~i~~~~~~~~~~~ 127 (330)
|++++..|..+..+.
T Consensus 348 pT~~~~vP~~l~~l~ 362 (696)
T PLN02387 348 PTLMTAVPAILDRVR 362 (696)
T ss_pred CcEEEehhHHHHHHH
Confidence 999999998877664
No 253
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=52.64 E-value=14 Score=19.62 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=18.2
Q ss_pred CCCCCCCCcccHHHHHHHhhhc
Q 048729 308 ELPKTSTGKIQKYLLREFAKSV 329 (330)
Q Consensus 308 ~lP~t~~GKv~r~~l~~~~~~~ 329 (330)
.+-++.+|+|+...+.+.+.+|
T Consensus 8 ~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 8 EFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHCCCCCCcCCHHHHHHHHHhC
Confidence 4567889999999999988764
No 254
>PRK11761 cysM cysteine synthase B; Provisional
Probab=51.47 E-value=1.4e+02 Score=26.18 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=51.6
Q ss_pred CcEEEeCCe--eecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHH
Q 048729 31 CPSLVYNNT--TYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVL 107 (330)
Q Consensus 31 ~~a~~~~~~--~~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~ 107 (330)
++.+-.++. +=||++ +.+..+...+.+.| +.+|+.|.....-+....++ +++...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~aSsGN~g~alA-~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIEATSGNTGIALA-MIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEEeCCChHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHH
Confidence 455555442 233433 33444444444455 46777765544444444444 5666788866555554445567779
Q ss_pred HHhcCCcEEEEcc
Q 048729 108 LQHSESKLVFVDH 120 (330)
Q Consensus 108 l~~~~~~~i~~~~ 120 (330)
++.++++++++..
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 255
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=51.23 E-value=1e+02 Score=28.00 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHh---cCCcEEEE
Q 048729 51 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQH---SESKLVFV 118 (330)
Q Consensus 51 ~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~---~~~~~i~~ 118 (330)
..+...+...++++||.|++..+..+.+ .-++...|+.++.++. .++.+.+...+++ .++++++.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~~~~---~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITFVAT---ANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcchHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 4444455566889999988877655433 3455678887766543 3567888888874 35666653
No 256
>PRK13390 acyl-CoA synthetase; Provisional
Probab=50.91 E-value=78 Score=29.76 Aligned_cols=64 Identities=13% Similarity=-0.038 Sum_probs=45.1
Q ss_pred HcCCCCCCEEEEECCCCHHHHH-HHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYE-LQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~-~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
..++.++|++....|.+..+.. ..+..+..|+.++. .+..++..+...+++.+++.+...|..+
T Consensus 189 ~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 253 (501)
T PRK13390 189 FYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVL-AKRFDAQATLGHVERYRITVTQMVPTMF 253 (501)
T ss_pred HhCCCCCCeEEecccchhhhHHHHHHHHHhcCceEEE-cCCcCHHHHHHHHHHcCCeEEEecHHHH
Confidence 4578889998888886644322 12223456887764 4466788999999999999998877544
No 257
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=50.56 E-value=97 Score=24.39 Aligned_cols=53 Identities=23% Similarity=0.230 Sum_probs=34.2
Q ss_pred HHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCC
Q 048729 236 AEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPR 296 (330)
Q Consensus 236 ~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~ 296 (330)
..|.+.+.+.|+|.++.++..++. .++.+.+..+... ....++++.+.+.+..
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~~---~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLEG---SVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcch---hhHHHHHHHHHHHHHh
Confidence 467888899999999999988764 3344444444321 3346666666655543
No 258
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=49.37 E-value=83 Score=28.63 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEE
Q 048729 51 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 51 ~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~ 117 (330)
..+...+..+++++||.|.+..+..+.+ ..++...|+.++.++. ..+.+.+...+.. +.++++
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~~~~~---~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLTWVST---LNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCcHHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3344445566789999988766554444 3345567888776653 2467778777754 456665
No 259
>PLN02565 cysteine synthase
Probab=48.69 E-value=2e+02 Score=25.63 Aligned_cols=91 Identities=14% Similarity=0.047 Sum_probs=53.0
Q ss_pred CcEEEeCCeeecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHH
Q 048729 31 CPSLVYNNTTYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQ 109 (330)
Q Consensus 31 ~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~ 109 (330)
++.+-..+..-|.+-=.+.+..+-..+.+.|. .+|....+.....-.-...-+++...|..+..+-|...+......++
T Consensus 31 ~i~~K~E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~ 110 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILL 110 (322)
T ss_pred eEEEEecccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHH
Confidence 44444443333332222334444444445564 77855334444433333333566678887776666666677778999
Q ss_pred hcCCcEEEEccc
Q 048729 110 HSESKLVFVDHL 121 (330)
Q Consensus 110 ~~~~~~i~~~~~ 121 (330)
.++++++++++.
T Consensus 111 ~~GA~V~~~~~~ 122 (322)
T PLN02565 111 AFGAELVLTDPA 122 (322)
T ss_pred HcCCEEEEeCCC
Confidence 999999998864
No 260
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=48.48 E-value=1.1e+02 Score=26.63 Aligned_cols=86 Identities=10% Similarity=0.115 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH---HHHHHHHhcCCcEEEEc
Q 048729 43 WSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---TLSVLLQHSESKLVFVD 119 (330)
Q Consensus 43 ~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~---~l~~~l~~~~~~~i~~~ 119 (330)
+.++.+..+.+-.++.+.--....+..+...+.+.|+.-.+++-..+..-+--....++. .+...+++.++++||+.
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 444445555555544422111234556666668888888787654443221112344455 56677788999999998
Q ss_pred ccchHHHHH
Q 048729 120 HLHTYLLLE 128 (330)
Q Consensus 120 ~~~~~~~~~ 128 (330)
+..-.....
T Consensus 236 ~~~~~~~~~ 244 (286)
T cd01019 236 PQFHPKIAE 244 (286)
T ss_pred CCCChHHHH
Confidence 887665443
No 261
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.44 E-value=1.3e+02 Score=29.41 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=58.8
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCC--CCCHHHHHHHHHhcCCcEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINT--RLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~--~~~~~~l~~~l~~~~~~~i 116 (330)
.++++.+........+. .++..+|+++...+.+++. +.-+|+.+..|+..+..+. ...+..+.+.+...+++++
T Consensus 385 ~~~h~~~~~~~~~~~~~---~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~ 461 (642)
T COG1020 385 RIEHRALANLLNDAGAR---FGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVL 461 (642)
T ss_pred eecCHHHHHHHHHHHHh---cCCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEE
Confidence 36777776644444444 6888999999999988876 5677999999998877764 4557788888888888888
Q ss_pred EEcc
Q 048729 117 FVDH 120 (330)
Q Consensus 117 ~~~~ 120 (330)
...|
T Consensus 462 ~~~p 465 (642)
T COG1020 462 LLVP 465 (642)
T ss_pred EecH
Confidence 7544
No 262
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.00 E-value=91 Score=29.26 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=44.7
Q ss_pred CCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 62 IQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
...++++....|..... ....++++..|+..+..+ ...+..+...+++.+++++...|..+.
T Consensus 184 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 246 (502)
T PRK08276 184 GGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALALIERYRVTHSQLVPTMFV 246 (502)
T ss_pred CCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHHHHHHhCCeEEEehHHHHH
Confidence 34677777777765433 344467788899886554 577899999999999999988776543
No 263
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=47.44 E-value=1.5e+02 Score=27.83 Aligned_cols=50 Identities=18% Similarity=0.327 Sum_probs=31.1
Q ss_pred HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe--------------ecCCCCCHHHHHHHHHhcC
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN--------------NINTRLDAHTLSVLLQHSE 112 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~--------------~l~~~~~~~~l~~~l~~~~ 112 (330)
..++++||.| .+| ..+...--.+...|+.++ |....++++.+...++...
T Consensus 111 ~l~v~pGd~V---p~n-~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 111 RIAIKPGQYV---PGN-MYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HhCCCCcCEE---CCc-cchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 5689999965 222 222222222577788766 3344678899999988654
No 264
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=46.35 E-value=1e+02 Score=29.09 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=69.6
Q ss_pred HHHHHHHhcCCCcEEEeCCe-eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC-CHHHHHHHHHhhhcCcEEeecCC
Q 048729 20 FLERAAAAYTDCPSLVYNNT-TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN-VPSMYELQFGVPMSGAILNNINT 97 (330)
Q Consensus 20 ~l~~~~~~~p~~~a~~~~~~-~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~-~~~~~~~~la~~~~G~~~~~l~~ 97 (330)
-+..-..+.-.+++++|.+. ++-|++.. +.+.-.|..|.-.|...-|. +...+..=|--+..-++.+|++.
T Consensus 379 sl~g~fSndfrqpcvvf~~H~SlRfgdv~-------h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidt 451 (653)
T KOG1138|consen 379 SLLGLFSNDFRQPCVVFMGHPSLRFGDVV-------HFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDT 451 (653)
T ss_pred HHHHHHhhhcccceeEecCCcchhhhHHH-------HHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccc
Confidence 33333445556777777664 37777653 33334466676677777664 34445454666667888999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEEcccchHHH
Q 048729 98 RLDAHTLSVLLQHSESKLVFVDHLHTYLL 126 (330)
Q Consensus 98 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 126 (330)
++.-..+..++.+.+|+++++.+.+....
T Consensus 452 rlnfqql~kLlkelqPk~vlcpeaytqp~ 480 (653)
T KOG1138|consen 452 RLNFQQLPKLLKELQPKIVLCPEAYTQPI 480 (653)
T ss_pred cccHHHHHHHHHHhCCCEEEChhhhcCCC
Confidence 99999999999999999999987766543
No 265
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=45.73 E-value=71 Score=24.33 Aligned_cols=47 Identities=9% Similarity=0.098 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC---CHHHHHHHHHhhhcCcEE-eecCC
Q 048729 51 LQVASSLSSVGIQRGHVVSVVAPN---VPSMYELQFGVPMSGAIL-NNINT 97 (330)
Q Consensus 51 ~~~a~~L~~~g~~~gd~V~~~~~~---~~~~~~~~la~~~~G~~~-~~l~~ 97 (330)
+.+...|.+.|+.+++.|.++... .......++.+..+|..- ..++.
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildG 131 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDG 131 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCC
Confidence 478888899999999999999864 444445556677778642 24443
No 266
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=45.09 E-value=41 Score=27.43 Aligned_cols=32 Identities=25% Similarity=0.603 Sum_probs=27.4
Q ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 048729 40 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVV 71 (330)
Q Consensus 40 ~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~ 71 (330)
-+||.++++.+.++|....+-|.+|.-.|++.
T Consensus 6 ~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 6 YVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 47999999999999999999999998555543
No 267
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=44.67 E-value=1.4e+02 Score=27.86 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=29.0
Q ss_pred CCCCCEEEEECCCCHHHHHH-HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYEL-QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~-~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|.+..+........ -..+...|+.+..++...+++.+...++. +.++|+.
T Consensus 97 l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 97 CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 46777665544333222221 12234567766666655566666666653 4455554
No 268
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=43.23 E-value=2.1e+02 Score=27.33 Aligned_cols=81 Identities=10% Similarity=-0.057 Sum_probs=45.5
Q ss_pred ecHHHHHHHHHHHHHHHHH-cCCC--CC-CEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCc
Q 048729 41 YTWSETHRRCLQVASSLSS-VGIQ--RG-HVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESK 114 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~-~g~~--~g-d~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~ 114 (330)
+|...+...+.....++.. .+.. .+ +.+....|... .+....+..+..|+..+.++.......+...+++.+++
T Consensus 224 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt 303 (557)
T PRK07059 224 LLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVH 303 (557)
T ss_pred eecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCe
Confidence 7888887766666666542 2221 12 34444555433 22334455556666655555445566677777777777
Q ss_pred EEEEccc
Q 048729 115 LVFVDHL 121 (330)
Q Consensus 115 ~i~~~~~ 121 (330)
.+...+.
T Consensus 304 ~~~~~p~ 310 (557)
T PRK07059 304 IFPAVNT 310 (557)
T ss_pred eeecCHH
Confidence 6666553
No 269
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=43.06 E-value=2.5e+02 Score=25.92 Aligned_cols=87 Identities=15% Similarity=0.107 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEee
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 94 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~ 94 (330)
.+..+.+.+.+++.-+.+.+....+.+-+.||.+...+.-+.+-..-+.+.+-|.+...-.-.++..+++++..|--++.
T Consensus 43 ~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii 122 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIV 122 (420)
T ss_pred CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEE
Confidence 34456666666666556555555566777888665555544443334456667888888888888888999999998888
Q ss_pred cCCCCCH
Q 048729 95 INTRLDA 101 (330)
Q Consensus 95 l~~~~~~ 101 (330)
+.|.+..
T Consensus 123 ~eP~fd~ 129 (420)
T KOG0257|consen 123 FEPFFDC 129 (420)
T ss_pred ecCcchh
Confidence 8887764
No 270
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.06 E-value=47 Score=30.49 Aligned_cols=13 Identities=8% Similarity=0.013 Sum_probs=7.5
Q ss_pred CCHHHHHHHHHhc
Q 048729 281 PTEKEIIEYCRAR 293 (330)
Q Consensus 281 ~~~~~l~~~l~~~ 293 (330)
..++++...+..+
T Consensus 447 IAAeEvEn~LL~H 459 (542)
T COG1021 447 IAAEEVENLLLRH 459 (542)
T ss_pred hhHHHHHHHHhhC
Confidence 5556666666543
No 271
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=42.71 E-value=1.5e+02 Score=25.58 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH---HHHHHHHhcCCcEEEEc
Q 048729 45 ETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---TLSVLLQHSESKLVFVD 119 (330)
Q Consensus 45 el~~~~~~~a~~L~~~--g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~---~l~~~l~~~~~~~i~~~ 119 (330)
.+.+..+.+-.++++. .+..+++..+...+.+.|+.-.+++-..+..-+.-...-++. .+...+++.++++||+.
T Consensus 138 ~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e 217 (276)
T cd01016 138 AYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIFVE 217 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3444444444444421 223345677777779999998888776664322112233444 56777788999999999
Q ss_pred ccchHHHHHH
Q 048729 120 HLHTYLLLEA 129 (330)
Q Consensus 120 ~~~~~~~~~~ 129 (330)
+.+-....+.
T Consensus 218 ~~~~~~~~~~ 227 (276)
T cd01016 218 SSVNQKSIEA 227 (276)
T ss_pred CCCCHHHHHH
Confidence 9877654433
No 272
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=42.25 E-value=1.5e+02 Score=25.71 Aligned_cols=83 Identities=8% Similarity=0.117 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH---HHHHHHHhcCCcEEEEc
Q 048729 44 SETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---TLSVLLQHSESKLVFVD 119 (330)
Q Consensus 44 ~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~---~l~~~l~~~~~~~i~~~ 119 (330)
..+......+-.++.+. .-.++ +..+...+.+.|+.-.+++-..+..-.--....++. .+...+++.++++||+.
T Consensus 149 ~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e 227 (282)
T cd01017 149 AAYAKKLEALDQEYRAKLAKAKG-KTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFE 227 (282)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC-CeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 33444444444444421 11133 445555568888888887766653321112344444 56667788999999999
Q ss_pred ccchHHHH
Q 048729 120 HLHTYLLL 127 (330)
Q Consensus 120 ~~~~~~~~ 127 (330)
+.+-....
T Consensus 228 ~~~~~~~~ 235 (282)
T cd01017 228 ENASSKIA 235 (282)
T ss_pred CCCChHHH
Confidence 88775444
No 273
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=42.00 E-value=2.1e+02 Score=25.99 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=38.5
Q ss_pred HcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 59 SVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 59 ~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
+.| ++||....+....+-.-...-+++...|..+..+-|...+.....+++.++++++++++
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67784333333333333333356677788666555544555557799999999999875
No 274
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=41.28 E-value=2.2e+02 Score=24.58 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=52.5
Q ss_pred eCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC----CHHHHHHHHHhc
Q 048729 36 YNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL----DAHTLSVLLQHS 111 (330)
Q Consensus 36 ~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~----~~~~l~~~l~~~ 111 (330)
+.+..+-.+.+. |+-.+|+.|++.| ..|..++......+.. .+...|..+..++... ..+++..++++.
T Consensus 7 Da~~~iG~GHv~-Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~ 79 (279)
T TIGR03590 7 DASSEIGLGHVM-RCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEE 79 (279)
T ss_pred cCCccccccHHH-HHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhc
Confidence 455666777765 4678899987644 3566665555444322 2357787777776543 245788999999
Q ss_pred CCcEEEEccc
Q 048729 112 ESKLVFVDHL 121 (330)
Q Consensus 112 ~~~~i~~~~~ 121 (330)
++++++++.-
T Consensus 80 ~~d~vV~D~y 89 (279)
T TIGR03590 80 KFDILIVDHY 89 (279)
T ss_pred CCCEEEEcCC
Confidence 9999998863
No 275
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=41.22 E-value=1.6e+02 Score=27.58 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=36.9
Q ss_pred cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC-----CCCHHHHHHHHHhcCCcEEEEc
Q 048729 60 VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-----RLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 60 ~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
.++++||.|.+..+..+.+. .++...|+.+++++. ..+.+.+...+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~~t~~a~~---~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGFPTTV---NPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 38899999888776655443 445567887776643 2457777777653 56666654
No 276
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=39.01 E-value=1.2e+02 Score=20.21 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHhcCC-------CcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Q 048729 14 PLTTLGFLERAAAAYTD-------CPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN 74 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~-------~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~ 74 (330)
..|+.+++......+|+ ..++.-.++.++ .+.-++.||+|+++-|-
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCCC
Confidence 57899999988888775 233333444444 22457899999998774
No 277
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=38.68 E-value=2.1e+02 Score=24.90 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH---HHHHHHHhcCCcEEEE
Q 048729 44 SETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---TLSVLLQHSESKLVFV 118 (330)
Q Consensus 44 ~el~~~~~~~a~~L~~--~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~---~l~~~l~~~~~~~i~~ 118 (330)
..+.+..+.+-.++.+ ..+....+..+.....+.|+.-.+++-..+..-.--....++. .+...+++.++++||+
T Consensus 153 ~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 232 (287)
T cd01137 153 AAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFV 232 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 3444444444444442 1333334667777778999888787766554321112344454 5666778899999999
Q ss_pred cccchHHHH
Q 048729 119 DHLHTYLLL 127 (330)
Q Consensus 119 ~~~~~~~~~ 127 (330)
.+..-....
T Consensus 233 e~~~~~~~~ 241 (287)
T cd01137 233 ESTVNDRLM 241 (287)
T ss_pred eCCCChHHH
Confidence 887766443
No 278
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=37.94 E-value=1.9e+02 Score=25.56 Aligned_cols=84 Identities=12% Similarity=0.137 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHH---HHHHHHhcCCcEEEE
Q 048729 43 WSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHT---LSVLLQHSESKLVFV 118 (330)
Q Consensus 43 ~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~---l~~~l~~~~~~~i~~ 118 (330)
+..+.+..+.+-.++++. .-.+ .+..+.....+.|+.-.+++-..|..-.--...-++.. +...+++.++++||+
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~~-~~~~i~~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 258 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPVK-GKGYFVFHDAYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFA 258 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhccC-CCcEEEECchHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 334444444444444421 1112 34455566688888888877766643211122334554 666667889999999
Q ss_pred cccchHHHH
Q 048729 119 DHLHTYLLL 127 (330)
Q Consensus 119 ~~~~~~~~~ 127 (330)
.+.+-....
T Consensus 259 e~~~~~~~~ 267 (311)
T PRK09545 259 EPQFRPAVI 267 (311)
T ss_pred cCCCChHHH
Confidence 988766544
No 279
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=37.83 E-value=2.6e+02 Score=23.87 Aligned_cols=73 Identities=16% Similarity=0.148 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhc------C--cEEeecCCC---CCHHHHHHHHHhcCCcEE
Q 048729 49 RCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMS------G--AILNNINTR---LDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 49 ~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~------G--~~~~~l~~~---~~~~~l~~~l~~~~~~~i 116 (330)
..+++.+.+...+ +.+||+|++..+-+.|.++.+..+... + ..++.++.. +..+.+..+.++.++.+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445555666655 578999999999999987765444321 2 344445542 345556777888888777
Q ss_pred EEccc
Q 048729 117 FVDHL 121 (330)
Q Consensus 117 ~~~~~ 121 (330)
+....
T Consensus 92 v~~~~ 96 (258)
T PRK10696 92 IEEQD 96 (258)
T ss_pred EEEec
Confidence 66543
No 280
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=37.53 E-value=2e+02 Score=26.24 Aligned_cols=22 Identities=9% Similarity=0.006 Sum_probs=15.7
Q ss_pred CHHHHHHHHhcCcCcceEEEEe
Q 048729 234 CSAEVESVLYSITAVNEAAVVA 255 (330)
Q Consensus 234 ~~~~iE~~l~~~~~v~~~~v~~ 255 (330)
+...+.+.|..||.|..+.-=+
T Consensus 257 na~~~a~~L~~~p~v~~V~yP~ 278 (382)
T TIGR02080 257 NAQAIVEYLQTQPLVKKIYYPG 278 (382)
T ss_pred HHHHHHHHHHhCCCeeEEECCC
Confidence 4566778888999888665533
No 281
>PLN02550 threonine dehydratase
Probab=37.43 E-value=4.1e+02 Score=26.07 Aligned_cols=96 Identities=8% Similarity=-0.003 Sum_probs=52.1
Q ss_pred HHhcCCCcEEEeCCeee--cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH
Q 048729 25 AAAYTDCPSLVYNNTTY--TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH 102 (330)
Q Consensus 25 ~~~~p~~~a~~~~~~~~--T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~ 102 (330)
.+....++.+-..+-+- ||++ +.+......|......+| +|+- +.+-.-...-+++..+|..+..+-|...+.
T Consensus 119 S~~~g~~IylK~E~lqptGSFK~--RGA~n~I~~L~~e~~~~G-VV~a--SaGNhAqgvA~aA~~lGika~IvmP~~tp~ 193 (591)
T PLN02550 119 SERLGVKVLLKREDLQPVFSFKL--RGAYNMMAKLPKEQLDKG-VICS--SAGNHAQGVALSAQRLGCDAVIAMPVTTPE 193 (591)
T ss_pred hHhhCCEEEEEEcCCCCCCcHHH--HHHHHHHHHHHHhcCCCC-EEEE--CCCHHHHHHHHHHHHcCCCEEEEECCCCCH
Confidence 33344455555555333 3443 222222222332234555 4443 333223333467778888666555555556
Q ss_pred HHHHHHHhcCCcEEEEcccchHH
Q 048729 103 TLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 103 ~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
.....++.++++++++...+.+.
T Consensus 194 ~Kv~~~r~~GAeVvl~g~~~dea 216 (591)
T PLN02550 194 IKWQSVERLGATVVLVGDSYDEA 216 (591)
T ss_pred HHHHHHHHcCCEEEEeCCCHHHH
Confidence 66778899999999998754443
No 282
>PRK10717 cysteine synthase A; Provisional
Probab=37.13 E-value=3e+02 Score=24.44 Aligned_cols=64 Identities=13% Similarity=0.075 Sum_probs=40.4
Q ss_pred HHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 57 LSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 57 L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
..+.| +++|+.|.....-+....++ +++...|..+..+-|...+......++.++++++.++..
T Consensus 55 a~~~g~~~~g~~vv~aSsGN~g~alA-~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVEGTAGNTGIGLA-LVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEEeCCcHHHHHHH-HHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33445 46777665544444544444 555677875554444444456678999999999988753
No 283
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=37.01 E-value=1.1e+02 Score=19.19 Aligned_cols=46 Identities=22% Similarity=0.242 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCcccCCCCCHHHHHHHHHh
Q 048729 235 SAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDLELTKKPTEKEIIEYCRA 292 (330)
Q Consensus 235 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~ 292 (330)
...|++.|.+.|||..+.+-.... . +.|...+.. ...+++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~-----~--v~v~~~~~~-----~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETK-----T--VTVTYDPDK-----TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT-----E--EEEEESTTT-----SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC-----E--EEEEEecCC-----CCHHHHHHHHHH
Confidence 468999999999998887754332 2 233333332 456888888776
No 284
>PRK10595 SOS cell division inhibitor; Provisional
Probab=36.92 E-value=1.8e+02 Score=23.06 Aligned_cols=65 Identities=12% Similarity=0.025 Sum_probs=32.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec---CCCCCHH---HHHHHHHhcCCcEEEE
Q 048729 54 ASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI---NTRLDAH---TLSVLLQHSESKLVFV 118 (330)
Q Consensus 54 a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l---~~~~~~~---~l~~~l~~~~~~~i~~ 118 (330)
+.+|.+.|+..+..+.+-..+..+.+.+.-=++++|.+...+ +...+.+ ++....+..+.-.++.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 455666777666544444455556655556666666533333 2244443 3333344444444443
No 285
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=36.62 E-value=41 Score=22.23 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEE
Q 048729 47 HRRCLQVASSLSSVGIQRGHVVSV 70 (330)
Q Consensus 47 ~~~~~~~a~~L~~~g~~~gd~V~~ 70 (330)
.-...-+-..|.+.|+++||.|-+
T Consensus 39 ~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 39 KLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHCCHHHHHHHcCCCCCCEEEE
Confidence 333444556677889999999876
No 286
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=36.51 E-value=3e+02 Score=24.27 Aligned_cols=61 Identities=10% Similarity=0.115 Sum_probs=39.6
Q ss_pred HHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecC-CCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 58 SSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN-TRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 58 ~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
.+.| ++||+.|.=-..-+...-++ +.+...|..++.+- ..++. +...+|+.+++.+++++.
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA-~vaa~~Gy~~iivmP~~~S~-er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALA-MVAAAKGYRLIIVMPETMSQ-ERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHH-HHHHHcCCcEEEEeCCCCCH-HHHHHHHHcCCEEEEcCC
Confidence 3345 89998554444444555555 44446677665554 45554 556699999999999986
No 287
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=36.48 E-value=83 Score=26.72 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHH---HHHHHHHhcCCcEEEE
Q 048729 43 WSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---TLSVLLQHSESKLVFV 118 (330)
Q Consensus 43 ~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~---~l~~~l~~~~~~~i~~ 118 (330)
+..+..+...+.+.+.+. .--++ +..+.....+.|+.-.|++-..+..-.--....++. ++...+++.++++||+
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~ 205 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFT 205 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEe
Confidence 445555555566655522 21233 566777778888888887776666511112344444 5667779999999999
Q ss_pred cccchHHHH
Q 048729 119 DHLHTYLLL 127 (330)
Q Consensus 119 ~~~~~~~~~ 127 (330)
.+.......
T Consensus 206 e~~~~~~~~ 214 (256)
T PF01297_consen 206 EPQFSSKLA 214 (256)
T ss_dssp ETTS-THHH
T ss_pred cCCCChHHH
Confidence 887766544
No 288
>PLN03013 cysteine synthase
Probab=36.44 E-value=3e+02 Score=25.69 Aligned_cols=69 Identities=22% Similarity=0.149 Sum_probs=41.4
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 53 VASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 53 ~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
+-....+.| +++|....+.....-.-...-+++...|..++.+-|...+......++.++++++++++.
T Consensus 161 ~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 161 MVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 333344445 578854444444433333333555667776555544445566677999999999998764
No 289
>PLN00011 cysteine synthase
Probab=36.08 E-value=3.1e+02 Score=24.32 Aligned_cols=70 Identities=9% Similarity=0.030 Sum_probs=42.7
Q ss_pred HHHHHHHHHcC-CCCC-CEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 51 LQVASSLSSVG-IQRG-HVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 51 ~~~a~~L~~~g-~~~g-d~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
..+.....+.| +.|| +.|.....-+....++ +++...|..+..+-|...+.....+++.+++.++++.+.
T Consensus 53 ~~~l~~a~~~g~~~~g~~~vv~aSsGN~g~alA-~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 53 YSMIKDAEDKGLITPGKSTLIEATAGNTGIGLA-CIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHHHHcCCCCCCCcEEEEeCCChHHHHHH-HHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33333344444 6777 5554433323444434 566678886665555444567777999999999998864
No 290
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=35.72 E-value=49 Score=21.85 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=14.5
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 048729 53 VASSLSSVGIQRGHVVSVV 71 (330)
Q Consensus 53 ~a~~L~~~g~~~gd~V~~~ 71 (330)
+-..|.+.|+++||.|-+.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 3445677899999998774
No 291
>PRK05939 hypothetical protein; Provisional
Probab=35.56 E-value=2e+02 Score=26.46 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=29.4
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|.+..+........+..+...|+.+..++. ...+.+...++. +.+++++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-~d~e~l~~~l~~-~tklV~v 137 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-TDVQNVAAAIRP-NTRMVFV 137 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-CCHHHHHHhCCC-CCeEEEE
Confidence 567777766544333333322334456776666654 245666666643 4555554
No 292
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=35.33 E-value=2.2e+02 Score=24.22 Aligned_cols=34 Identities=29% Similarity=0.301 Sum_probs=24.3
Q ss_pred CceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHH
Q 048729 205 GDIGVMHADGYVEIKDRSKDVIISGGENICSAEVESV 241 (330)
Q Consensus 205 GD~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~ 241 (330)
|.+.+.++||...+.|..=| .+|.++.-..++..
T Consensus 58 ~~i~Y~t~dg~y~i~G~l~d---~~~~nlT~~~~~~~ 91 (251)
T PRK11657 58 GVTIYLTPDGKHAISGYMYD---EKGENLSEALLEKE 91 (251)
T ss_pred ceEEEEcCCCCEEEEEEEEc---CCCCccCHHHHHHH
Confidence 33567788898888887644 45778877777763
No 293
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=35.30 E-value=2.2e+02 Score=25.98 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=16.3
Q ss_pred CHHHHHHHHhcCcCcceEEEEeec
Q 048729 234 CSAEVESVLYSITAVNEAAVVARP 257 (330)
Q Consensus 234 ~~~~iE~~l~~~~~v~~~~v~~~~ 257 (330)
+...+.+.|..+|.|..+.-=+.+
T Consensus 258 na~~la~~L~~~p~v~~V~yP~l~ 281 (385)
T PRK08574 258 NAMAIAEFLSEHPKVAEVYYPGLP 281 (385)
T ss_pred HHHHHHHHHHcCCCcCEEECCCCC
Confidence 345666778889988877654443
No 294
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=35.05 E-value=3.5e+02 Score=25.74 Aligned_cols=79 Identities=14% Similarity=-0.006 Sum_probs=47.7
Q ss_pred ecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH--HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEE
Q 048729 41 YTWSETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLV 116 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~--~g~~~gd~V~~~~~~~~~--~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i 116 (330)
+|.+.+...+. ..+.. .+...++++....|.... +...+++.+..|+.++..+ ...+..+...+++.+++.+
T Consensus 204 ~s~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~ 279 (546)
T PLN02330 204 LTHRNLVANLC---SSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMS-RFELRTFLNALITQEVSFA 279 (546)
T ss_pred EehHHHHHHHH---HHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEec-ccCHHHHHHHHHHcCCeee
Confidence 77777654332 21111 122233456666665433 3445677788888876554 5677888888888888887
Q ss_pred EEcccch
Q 048729 117 FVDHLHT 123 (330)
Q Consensus 117 ~~~~~~~ 123 (330)
...|..+
T Consensus 280 ~~~P~~~ 286 (546)
T PLN02330 280 PIVPPII 286 (546)
T ss_pred ecCCHHH
Confidence 7665543
No 295
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=34.82 E-value=2.7e+02 Score=25.78 Aligned_cols=66 Identities=11% Similarity=0.028 Sum_probs=47.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeec--CCCCCHHHHHHHHHhcCCcEEE
Q 048729 52 QVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI--NTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 52 ~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l--~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
.+...+.+..-=.|-+|+.+.+..+.....+..+...||-+... +|..+.+++...|...++.+.-
T Consensus 19 ~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 19 RIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred HHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 33334433333367899999999999988888888899976555 5666677777777777777654
No 296
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members. are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A ....
Probab=34.23 E-value=1.9e+02 Score=24.15 Aligned_cols=73 Identities=16% Similarity=-0.012 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~ 93 (330)
.-+.++.....+.-++.+.+.|+.+..+-.++.+.+..+...+. .-.+.+-..|...+ +.-.++++.+|+-.+
T Consensus 137 ~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~v~~lv~~~~~~~~------~~~l~~H~Hnd~Gla~An~laA~~aGa~~i 210 (237)
T PF00682_consen 137 EELLELAEALAEAGADIIYLADTVGIMTPEDVAELVRALREALP------DIPLGFHAHNDLGLAVANALAALEAGADRI 210 (237)
T ss_dssp HHHHHHHHHHHHHT-SEEEEEETTS-S-HHHHHHHHHHHHHHST------TSEEEEEEBBTTS-HHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHHHHcCCeEEEeeCccCCcCHHHHHHHHHHHHHhcc------CCeEEEEecCCccchhHHHHHHHHcCCCEE
Confidence 34556666666667899999999888888888777777666652 24788888887665 666788889999775
No 297
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=33.57 E-value=1.8e+02 Score=29.22 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=42.3
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC---------C-----HHHHHHHHHhcC-Cc----EEEEcccc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL---------D-----AHTLSVLLQHSE-SK----LVFVDHLH 122 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~---------~-----~~~l~~~l~~~~-~~----~i~~~~~~ 122 (330)
+++||.|+ +-.|++-.+.. |+..+|+.++-+.|.. + ++.+...+++.. ++ ++++.+.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 57899765 66777776555 8999999999886543 3 678888887652 33 67777765
Q ss_pred hH
Q 048729 123 TY 124 (330)
Q Consensus 123 ~~ 124 (330)
..
T Consensus 309 dG 310 (714)
T PRK15400 309 DG 310 (714)
T ss_pred cc
Confidence 43
No 298
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=33.29 E-value=2.9e+02 Score=23.75 Aligned_cols=75 Identities=15% Similarity=0.021 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~ 92 (330)
+.-+.+++....+.-++++.+.|+.+..+=.++.+.+..+.+.+ .++-.+.+-+.|...+ +.-.++.+.+|+..
T Consensus 137 ~~~~~~~~~~~~~~g~~~i~l~DT~G~~~P~~v~~lv~~l~~~~-----~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~ 211 (266)
T cd07944 137 DEELLELLELVNEIKPDVFYIVDSFGSMYPEDIKRIISLLRSNL-----DKDIKLGFHAHNNLQLALANTLEAIELGVEI 211 (266)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-----CCCceEEEEeCCCccHHHHHHHHHHHcCCCE
Confidence 34455666666666688999999999999888888888776544 2234688888888766 55668888999865
Q ss_pred e
Q 048729 93 N 93 (330)
Q Consensus 93 ~ 93 (330)
+
T Consensus 212 v 212 (266)
T cd07944 212 I 212 (266)
T ss_pred E
Confidence 4
No 299
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=32.87 E-value=3.5e+02 Score=23.93 Aligned_cols=62 Identities=8% Similarity=0.065 Sum_probs=40.4
Q ss_pred HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 048729 59 SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHL 121 (330)
Q Consensus 59 ~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 121 (330)
+.|..+++.|.....-+....+ -++|...|..++.+-+...+......++.++++++++...
T Consensus 45 ~~g~~~~~~vv~aSsGN~g~al-A~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 45 KQGLNECVHVVCSSGGNAGLAA-AYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HhhcccCCeEEEeCCcHHHHHH-HHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3343456666555543343333 3667788886666655555567788999999999998765
No 300
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the 3-layer alpha/beta/alpha sandwich domain. This domain has a similar topology to the archaeal hypothetical protein, MTH1675 from Methanobacterium thermoautotrophicum.; PDB: 3QTG_B 1VP8_A 1T57_C 3N25_A 1AQF_C 2G50_B 1F3X_G 1A5U_F 1A49_E 1F3W_C ....
Probab=32.79 E-value=1.8e+02 Score=21.26 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=33.4
Q ss_pred HHHHHHhcCCCcEEEeCCee-----------------ecHH-HHHHHHHHHHHHHHHcCC-CCCCEEEEECCC
Q 048729 21 LERAAAAYTDCPSLVYNNTT-----------------YTWS-ETHRRCLQVASSLSSVGI-QRGHVVSVVAPN 74 (330)
Q Consensus 21 l~~~~~~~p~~~a~~~~~~~-----------------~T~~-el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~ 74 (330)
....++.+|..+.+...... -... +..+......+++.+.|+ ++||.|.++...
T Consensus 30 a~~isk~RP~~pIiavt~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~a~~~~~~~g~~~~gd~vVv~~g~ 102 (117)
T PF02887_consen 30 ARLISKYRPKVPIIAVTPNESVARQLSLYWGVYPVLIEEFDKDTEELIAEALEYAKERGLLKPGDKVVVVAGM 102 (117)
T ss_dssp HHHHHHT-TSSEEEEEESSHHHHHHGGGSTTEEEEECSSHSHSHHHHHHHHHHHHHHTTSS-TTSEEEEEEES
T ss_pred HHHHHhhCCCCeEEEEcCcHHHHhhhhcccceEEEEeccccccHHHHHHHHHHHHHHcCCCCCCCEEEEEeCC
Confidence 44566778888887764311 1111 255666777777777775 999998887663
No 301
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=32.48 E-value=4.2e+02 Score=24.72 Aligned_cols=89 Identities=9% Similarity=-0.046 Sum_probs=50.8
Q ss_pred CcEEEeCCeeecHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHH
Q 048729 31 CPSLVYNNTTYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQ 109 (330)
Q Consensus 31 ~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~ 109 (330)
++.+-..+..-|.+-=.+.+..+.....+.|. .+|+.|.....-+....++ ++|...|..+..+-|...+......++
T Consensus 27 ~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~vv~~ssGN~g~alA-~~a~~~G~~~~iv~p~~~~~~k~~~~~ 105 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPGDTIIEPTSGNTGIGLA-LVAAIKGYKCIIVLPEKMSNEKVDVLK 105 (454)
T ss_pred eEEEEEhhcCCCcchHHHHHHHHHHHHHHcCCCCCCCEEEEeCCcHHHHHHH-HHHHHcCCeEEEEeCCCcCHHHHHHHH
Confidence 45555554333322222233333344444454 6777766654444444444 566778886665554444455667889
Q ss_pred hcCCcEEEEcc
Q 048729 110 HSESKLVFVDH 120 (330)
Q Consensus 110 ~~~~~~i~~~~ 120 (330)
.++++++.+..
T Consensus 106 ~~GA~v~~~~~ 116 (454)
T TIGR01137 106 ALGAEIVRTPT 116 (454)
T ss_pred HCCCEEEEcCC
Confidence 99999998864
No 302
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=32.31 E-value=80 Score=16.36 Aligned_cols=19 Identities=16% Similarity=0.379 Sum_probs=14.9
Q ss_pred EEecCceEEEEecCCCeEE
Q 048729 209 VMHADGYVEIKDRSKDVII 227 (330)
Q Consensus 209 ~~~~~G~l~~~GR~dd~ik 227 (330)
..+++|.+++..+....|+
T Consensus 8 av~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EEETTSEEEEEECCCTEEE
T ss_pred EEeCCCCEEEEECCCCEEE
Confidence 3458999999998877665
No 303
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=32.02 E-value=3.1e+02 Score=25.39 Aligned_cols=63 Identities=19% Similarity=0.271 Sum_probs=43.6
Q ss_pred CCCCCCEEEEECCCCHHHH----HHHH--HhhhcCcEE---eecCCCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 61 GIQRGHVVSVVAPNVPSMY----ELQF--GVPMSGAIL---NNINTRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 61 g~~~gd~V~~~~~~~~~~~----~~~l--a~~~~G~~~---~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
.++++|.|.+.++..+... ..++ .+.+.|+.+ +..+.+.+.+++..+++..+|+.++-.-...
T Consensus 315 ~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHge~ 386 (422)
T TIGR00649 315 RIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHGEY 386 (422)
T ss_pred EeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCCcH
Confidence 4568999988886655333 1222 255678854 3566788889999999999999887544333
No 304
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=31.90 E-value=3.1e+02 Score=24.46 Aligned_cols=54 Identities=22% Similarity=0.368 Sum_probs=33.0
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC----CCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT----RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|++..|.... ...++...|+.++.++. ....+.+...+...++++++.
T Consensus 97 ~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l 154 (351)
T PRK14807 97 INKGDVVIYPHPSFAM---YSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFL 154 (351)
T ss_pred cCCCCEEEEeCCChHH---HHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 4688888887664332 22344556776555542 345677777776667777654
No 305
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=31.85 E-value=1.8e+02 Score=26.16 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=45.9
Q ss_pred HHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 57 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 57 L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
|+..+++||++|++..--....+...+|- ..|+-++.++.+ ++-.+..++.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Ak-a~ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAK-AMGAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHH-HcCCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 45678999999999998888888887776 455888888764 3445567888888887753
No 306
>PLN02356 phosphateglycerate kinase
Probab=31.34 E-value=3.9e+02 Score=24.90 Aligned_cols=71 Identities=15% Similarity=0.073 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 49 RCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 49 ~~~~~a~~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
.+..+...+.+.|. +++.+|.....=+.... .-++|...|..+..+-|...+.....+++.++++++.+.+
T Consensus 87 ~A~~~i~~a~~~g~~~~~g~VveaSSGN~g~a-lA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 87 VAVKIIEEALESGQLFPGGVVTEGSAGSTAIS-LATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHHHHHhCCccCCCCEEEEeCCHHHHHH-HHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 33444444444443 47776653333333333 3366667888655554444444556799999999998853
No 307
>PRK05973 replicative DNA helicase; Provisional
Probab=30.57 E-value=1.7e+02 Score=24.71 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHH--HHhhhcC
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPS--MYELQ--FGVPMSG 89 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~--~~~~~--la~~~~G 89 (330)
.++.+.+.+.|.+.. --+|+.|...+....-.=. .-|+.+|+.+.+.++.+.. .+... ......|
T Consensus 23 ~~~~~~~~~~a~~~g----------~~~w~~~~~~~~~~~p~~~l~GGl~~Gsl~LIaG~PG~GKT~lalqfa~~~a~~G 92 (237)
T PRK05973 23 IPLHEALDRIAAEEG----------FSSWSLLAAKAAATTPAEELFSQLKPGDLVLLGARPGHGKTLLGLELAVEAMKSG 92 (237)
T ss_pred CcHHHHHHHHHHHhc----------cchHHHHHHhccCCCCHHHhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcC
Confidence 345555555554442 2367777665554322211 2499999999999998732 22222 2233458
Q ss_pred cEEeecCCCCCHHHHHHHHHhcCC
Q 048729 90 AILNNINTRLDAHTLSVLLQHSES 113 (330)
Q Consensus 90 ~~~~~l~~~~~~~~l~~~l~~~~~ 113 (330)
-.++.++...+++.+...+...+.
T Consensus 93 e~vlyfSlEes~~~i~~R~~s~g~ 116 (237)
T PRK05973 93 RTGVFFTLEYTEQDVRDRLRALGA 116 (237)
T ss_pred CeEEEEEEeCCHHHHHHHHHHcCC
Confidence 777778888888888888877753
No 308
>PLN02409 serine--glyoxylate aminotransaminase
Probab=30.44 E-value=4.3e+02 Score=24.18 Aligned_cols=13 Identities=15% Similarity=0.230 Sum_probs=8.1
Q ss_pred CCHHHHHHHHHhc
Q 048729 281 PTEKEIIEYCRAR 293 (330)
Q Consensus 281 ~~~~~l~~~l~~~ 293 (330)
.+.+++.+.+.++
T Consensus 317 ~~~~~l~~~l~~~ 329 (401)
T PLN02409 317 IDSAEIVKNAWKK 329 (401)
T ss_pred CCHHHHHHHHHHh
Confidence 4556777766554
No 309
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=30.17 E-value=89 Score=21.34 Aligned_cols=38 Identities=16% Similarity=0.107 Sum_probs=31.2
Q ss_pred HHHHH-HcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 54 ASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 54 a~~L~-~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
..+|+ ..|+++|+.++.+.....+.+..+=+.+++.-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV 41 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADV 41 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhce
Confidence 45677 679999999999999999988888777777543
No 310
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=29.45 E-value=3.8e+02 Score=23.31 Aligned_cols=91 Identities=12% Similarity=0.024 Sum_probs=52.2
Q ss_pred CcEEEeCCeeecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHH
Q 048729 31 CPSLVYNNTTYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQ 109 (330)
Q Consensus 31 ~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~ 109 (330)
++.+-.++..-|.+-=.+.+..+.....+.| +.+|+.|.....-+....++ +++...|..+..+-|...+.....+++
T Consensus 22 ~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~vv~aSsGN~g~alA-~~a~~~Gl~~~i~vp~~~~~~k~~~~~ 100 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKTIVEPTSGNTGIALA-MVAAARGYKLILTMPETMSIERRKLLK 100 (298)
T ss_pred eEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCCCEEEEeCCChhHHHHH-HHHHHcCCeEEEEeCCccCHHHHHHHH
Confidence 4555555433333222233333334444556 47777774444444444444 455568886665555444445577899
Q ss_pred hcCCcEEEEcccc
Q 048729 110 HSESKLVFVDHLH 122 (330)
Q Consensus 110 ~~~~~~i~~~~~~ 122 (330)
.++++++++....
T Consensus 101 ~~GA~v~~~~~~~ 113 (298)
T TIGR01139 101 AYGAELVLTPGAE 113 (298)
T ss_pred HcCCEEEEECCCC
Confidence 9999999998754
No 311
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=29.06 E-value=2.9e+02 Score=23.96 Aligned_cols=55 Identities=16% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC----------CCCHHHHHHHHHh-cCCcEEEEc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT----------RLDAHTLSVLLQH-SESKLVFVD 119 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~----------~~~~~~l~~~l~~-~~~~~i~~~ 119 (330)
+++||.|.+.-+.+.... .++...|+.++.+++ ..+.+.+...+++ .++++++.+
T Consensus 96 ~~~gd~Vlv~~~~h~s~~---~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKSVI---NGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHHHH---HHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 468998887766554432 344457877665543 3567888888875 456665443
No 312
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=28.81 E-value=1.9e+02 Score=21.81 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=29.7
Q ss_pred HHHHHHHHHHH-HcCCCCCCEEEEECCC--CHHHHHHHHHhhhcCcEEeec
Q 048729 48 RRCLQVASSLS-SVGIQRGHVVSVVAPN--VPSMYELQFGVPMSGAILNNI 95 (330)
Q Consensus 48 ~~~~~~a~~L~-~~g~~~gd~V~~~~~~--~~~~~~~~la~~~~G~~~~~l 95 (330)
....-+++.+. ...+++||.+.+++.. ++..+-+...+...|+.++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 86 EYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp TGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred chhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 33344555554 4567899988877764 466777778888888887765
No 313
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=28.79 E-value=3.9e+02 Score=23.26 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=49.5
Q ss_pred CcEEEeCCee--ecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHH
Q 048729 31 CPSLVYNNTT--YTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVL 107 (330)
Q Consensus 31 ~~a~~~~~~~--~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~ 107 (330)
++.+-.++.. -+|+. +.+..+...+.+.| +.+|+.|.-...-+....++ +++...|..+..+-|...+......
T Consensus 23 ~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~aSsGN~g~alA-~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTIIEATSGNTGIALA-MVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEEEEeCCChHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4555544432 23332 33333333444445 36777665444434444444 4555678755555444444555678
Q ss_pred HHhcCCcEEEEccc
Q 048729 108 LQHSESKLVFVDHL 121 (330)
Q Consensus 108 l~~~~~~~i~~~~~ 121 (330)
++.++++++++...
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998765
No 314
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=28.39 E-value=1.6e+02 Score=26.77 Aligned_cols=59 Identities=14% Similarity=0.090 Sum_probs=36.2
Q ss_pred CCCCCEEEEECCCCHHHHHHHH--HhhhcCc--EEeecC-----CCCCHHHHHHHHHhcCCcEEEEcc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQF--GVPMSGA--ILNNIN-----TRLDAHTLSVLLQHSESKLVFVDH 120 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~l--a~~~~G~--~~~~l~-----~~~~~~~l~~~l~~~~~~~i~~~~ 120 (330)
+++||.|++..+....+..... ++...|+ ..++++ .....+.+...+...++++++...
T Consensus 102 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 102 LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 3689998888876544332211 1334565 334443 244678888888777888887644
No 315
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=28.00 E-value=3e+02 Score=21.81 Aligned_cols=91 Identities=16% Similarity=0.096 Sum_probs=55.3
Q ss_pred HHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC-CHHHHHHHHHhhhcC--cEEeecCC
Q 048729 21 LERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN-VPSMYELQFGVPMSG--AILNNINT 97 (330)
Q Consensus 21 l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~-~~~~~~~~la~~~~G--~~~~~l~~ 97 (330)
|.++++..+..+.+.|.++.+|=+-. +.+..+|+||...|+.+. +|++---. .-+..-.+...+... .++--+.|
T Consensus 6 LmRHgkA~~~~~~~~D~dR~Lt~~G~-~ea~~~a~~L~~~~~~~D-~VL~Spa~Ra~QTae~v~~~~~~~~~~~~~~l~p 83 (163)
T COG2062 6 LMRHGKAEWAAPGIADFDRPLTERGR-KEAELVAAWLAGQGVEPD-LVLVSPAVRARQTAEIVAEHLGEKKVEVFEELLP 83 (163)
T ss_pred EeecccccccCCCCCCccCcCCHHHH-HHHHHHHHHHHhcCCCCC-EEEeChhHHHHHHHHHHHHhhCcccceeccccCC
Confidence 34556666677767788888887765 457899999999998543 44332221 234444444444433 22333446
Q ss_pred CCCHHHHHHHHHhcCC
Q 048729 98 RLDAHTLSVLLQHSES 113 (330)
Q Consensus 98 ~~~~~~l~~~l~~~~~ 113 (330)
.-.+..+...++...-
T Consensus 84 ~~d~~~~l~~l~~~~d 99 (163)
T COG2062 84 NGDPGTVLDYLEALGD 99 (163)
T ss_pred CCCHHHHHHHHHHhcc
Confidence 6667777777766663
No 316
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=27.79 E-value=1.1e+02 Score=26.43 Aligned_cols=51 Identities=8% Similarity=0.083 Sum_probs=40.1
Q ss_pred ecHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcE
Q 048729 41 YTWSETHR-----RCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 91 (330)
Q Consensus 41 ~T~~el~~-----~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~ 91 (330)
+.|.++.. ....+...|...|+.+++.|.+++.++......++++..+|..
T Consensus 202 i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 202 VPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 67777753 2466777778889999999999999988877777888888875
No 317
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.47 E-value=3.1e+02 Score=23.45 Aligned_cols=82 Identities=10% Similarity=0.060 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCH---HHHHHHHHhcCCcEEEE
Q 048729 43 WSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA---HTLSVLLQHSESKLVFV 118 (330)
Q Consensus 43 ~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~---~~l~~~l~~~~~~~i~~ 118 (330)
+..+.+....+..++.+. .-.+ .+..+...+.+.|+.-.+++-..+.. .-....++ ..+...+++.++++||+
T Consensus 147 ~~~~~~~L~~l~~~~~~~~~~~~-~~~~v~~H~af~Y~~~~ygl~~~~~~--~~~~eps~~~l~~l~~~ik~~~v~~if~ 223 (266)
T cd01018 147 LDALLAELDALDSEIRTILSKLK-QRAFMVYHPAWGYFARDYGLTQIPIE--EEGKEPSPADLKRLIDLAKEKGVRVVFV 223 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCeEEEECchhHHHHHHcCCEEEecC--CCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 344444445555554422 1113 35556666688888887877665431 11123334 36777788899999999
Q ss_pred cccchHHHH
Q 048729 119 DHLHTYLLL 127 (330)
Q Consensus 119 ~~~~~~~~~ 127 (330)
.+..-....
T Consensus 224 e~~~~~~~~ 232 (266)
T cd01018 224 QPQFSTKSA 232 (266)
T ss_pred cCCCCcHHH
Confidence 887665443
No 318
>KOG0387 consensus Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) [Transcription; Replication, recombination and repair]
Probab=27.13 E-value=4.5e+02 Score=26.73 Aligned_cols=102 Identities=12% Similarity=0.072 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchHH
Q 048729 48 RRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTYL 125 (330)
Q Consensus 48 ~~~~~~a~~L~~~g~~~gd~V~~~~~~~~--~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (330)
-.+..++..|... .+.|++|+++....- +++..+|.- .-|..++-++...+...-..++++++-..-+-.-
T Consensus 530 GKm~vl~~ll~~W-~kqg~rvllFsqs~~mLdilE~fL~~-~~~ysylRmDGtT~~~~R~~lVd~Fne~~s~~VF----- 602 (923)
T KOG0387|consen 530 GKMKVLAKLLKDW-KKQGDRVLLFSQSRQMLDILESFLRR-AKGYSYLRMDGTTPAALRQKLVDRFNEDESIFVF----- 602 (923)
T ss_pred chHHHHHHHHHHH-hhCCCEEEEehhHHHHHHHHHHHHHh-cCCceEEEecCCCccchhhHHHHhhcCCCceEEE-----
Confidence 3444555555422 268999999887663 333333332 4688999999888888777888888732211100
Q ss_pred HHHHhccCchHHHHhhccCCcccCceeEEEeCCCCCcccCC
Q 048729 126 LLEALSLFPQRARLKARQGVKTVGLAEVDVVNPETGESVKR 166 (330)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~G~~~~g~te~~i~d~~~g~~~~~ 166 (330)
...-..+..|.++-|.-.+.|.|| +.+|-..
T Consensus 603 ---------LLTTrvGGLGlNLTgAnRVIIfDP-dWNPStD 633 (923)
T KOG0387|consen 603 ---------LLTTRVGGLGLNLTGANRVIIFDP-DWNPSTD 633 (923)
T ss_pred ---------EEEecccccccccccCceEEEECC-CCCCccc
Confidence 011125678899999989999999 7766543
No 319
>PRK07503 methionine gamma-lyase; Provisional
Probab=26.70 E-value=3.9e+02 Score=24.55 Aligned_cols=55 Identities=16% Similarity=0.351 Sum_probs=29.0
Q ss_pred CCCCCEEEEECCCCHHHHH-HHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYE-LQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~-~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|++..+....... ...++...|+.+..++.. .++.+...++. ++++++.
T Consensus 101 l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~l 156 (403)
T PRK07503 101 LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYF 156 (403)
T ss_pred cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEE
Confidence 5677777665543322222 212344567766666542 45666666543 5566654
No 320
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=26.60 E-value=3.1e+02 Score=24.61 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=65.2
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~ 92 (330)
+..+.+++....+.-++.+.+.|+.+.++=.++.+.+..+...+ .++-.|.+-+.|+..+ +.-.++++.+|+..
T Consensus 143 ~e~l~~~a~~~~~~Ga~~i~i~DT~G~~~P~~v~~~v~~l~~~l-----~~~i~ig~H~HnnlGla~ANslaAi~aGa~~ 217 (337)
T PRK08195 143 PEKLAEQAKLMESYGAQCVYVVDSAGALLPEDVRDRVRALRAAL-----KPDTQVGFHGHNNLGLGVANSLAAVEAGATR 217 (337)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCCCCHHHHHHHHHHHHHhc-----CCCCeEEEEeCCCcchHHHHHHHHHHhCCCE
Confidence 34455555555555688888899999999999888888887655 2444788888888765 55667888899875
Q ss_pred eecC--------CCCCHHHHHHHHHhcCCc
Q 048729 93 NNIN--------TRLDAHTLSVLLQHSESK 114 (330)
Q Consensus 93 ~~l~--------~~~~~~~l~~~l~~~~~~ 114 (330)
+=.. .+.+-+.+...++..+.+
T Consensus 218 iD~Sl~GlG~~aGN~~tE~lv~~L~~~g~~ 247 (337)
T PRK08195 218 IDGSLAGLGAGAGNTPLEVLVAVLDRMGWE 247 (337)
T ss_pred EEecChhhcccccCccHHHHHHHHHhcCCC
Confidence 4221 133446666666665443
No 321
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=26.58 E-value=64 Score=17.01 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=15.5
Q ss_pred CCCCCCCcccHHHHHHHhh
Q 048729 309 LPKTSTGKIQKYLLREFAK 327 (330)
Q Consensus 309 lP~t~~GKv~r~~l~~~~~ 327 (330)
+-.+.+|+|+..++...+.
T Consensus 9 ~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 9 FDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp H-TTSSSEEEHHHHHHHHH
T ss_pred HCCCCCCcCcHHHHHHHHH
Confidence 4467789999999999887
No 322
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=26.43 E-value=61 Score=20.39 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=13.5
Q ss_pred eCceEEEecCceEEEEecC
Q 048729 204 TGDIGVMHADGYVEIKDRS 222 (330)
Q Consensus 204 TGD~~~~~~~G~l~~~GR~ 222 (330)
-|.+.+.++||.+.+.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567788888888888764
No 323
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=26.15 E-value=4.3e+02 Score=24.13 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=16.8
Q ss_pred CHHHHHHHHhcCcCcceEEEEeec
Q 048729 234 CSAEVESVLYSITAVNEAAVVARP 257 (330)
Q Consensus 234 ~~~~iE~~l~~~~~v~~~~v~~~~ 257 (330)
+...|.+.|.+||.|..+.--+.+
T Consensus 258 na~~la~~L~~~p~v~~V~yp~l~ 281 (386)
T PRK08045 258 NAQAIVKYLQTQPLVKKLYHPSLP 281 (386)
T ss_pred HHHHHHHHHHcCCCEeEEECCCCC
Confidence 446677888899998876554443
No 324
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=26.12 E-value=4.6e+02 Score=23.30 Aligned_cols=54 Identities=17% Similarity=0.291 Sum_probs=31.7
Q ss_pred CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC----CCCHHHHHHHHHhcCCcEEEEc
Q 048729 63 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT----RLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 63 ~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~----~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
.+||.|++..|....+ ...+...|+.+++++. ..+.+.+...+...++++++..
T Consensus 103 ~~gd~vlv~~P~y~~~---~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 103 KPGATVLAPEPGFVMY---RMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred CCCCEEEECCCCHHHH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 5677777766644332 3345566776655542 3456677777766666666543
No 325
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=26.04 E-value=4.8e+02 Score=23.30 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=75.2
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHhcCCCcEEEeCC--------ee-ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC-
Q 048729 5 LLPNSANSTPLTTLGFLERAAAAYTDCPSLVYNN--------TT-YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN- 74 (330)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~a~~~~~--------~~-~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~- 74 (330)
.+++.-+..+.|+..+|.+.-++.+.++.-+..- ++ +.=+|+...+..+++.|++. ++..--|.++...
T Consensus 130 VTGpTGSGKSTTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraA-LReDPDVIlvGEmR 208 (353)
T COG2805 130 VTGPTGSGKSTTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAA-LREDPDVILVGEMR 208 (353)
T ss_pred EeCCCCCcHHHHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHH-hhcCCCEEEEeccc
Confidence 4567777888899999999999999888777532 12 66789999999999999842 2333235666664
Q ss_pred CHHHHHHHHHhhhcCcEEe-ecCCCCCHHHHHHHHH
Q 048729 75 VPSMYELQFGVPMSGAILN-NINTRLDAHTLSVLLQ 109 (330)
Q Consensus 75 ~~~~~~~~la~~~~G~~~~-~l~~~~~~~~l~~~l~ 109 (330)
..+.+-..+-+...|-.++ -++.+.....+..+++
T Consensus 209 D~ETi~~ALtAAETGHLV~~TLHT~sA~~ti~Riid 244 (353)
T COG2805 209 DLETIRLALTAAETGHLVFGTLHTNSAAKTIDRIID 244 (353)
T ss_pred cHHHHHHHHHHHhcCCEEEEecccccHHHHHHHHHH
Confidence 5888888788888888665 4555555566666666
No 326
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain. FrbC (NifV) of Streptomyces rubellomurinus catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate and CoA, a reaction similar to one catalyzed by homocitrate synthase. The gene encoding FrbC is one of several genes required for the biosynthesis of FR900098, a potent antimalarial antibiotic. This protein is also required for assembly of the nitrogenase MoFe complex but its exact role is unknown. This family also includes the NifV proteins of Heliobacterium chlorum and Gluconacetobacter diazotrophicus, which appear to be orthologous to FrbC. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarbox
Probab=25.96 E-value=3.1e+02 Score=23.36 Aligned_cols=92 Identities=13% Similarity=0.019 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEee
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNN 94 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~~ 94 (330)
-+.+++....+.-++.+.+.|+.+..+-.++.+.+..+.+.+ + -.+.+-+.|...+ +...++++.+|+..+=
T Consensus 140 ~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~---~----~~l~~H~Hn~~Gla~An~laAi~aG~~~vd 212 (259)
T cd07939 140 FLIEFAEVAQEAGADRLRFADTVGILDPFTTYELIRRLRAAT---D----LPLEFHAHNDLGLATANTLAAVRAGATHVS 212 (259)
T ss_pred HHHHHHHHHHHCCCCEEEeCCCCCCCCHHHHHHHHHHHHHhc---C----CeEEEEecCCCChHHHHHHHHHHhCCCEEE
Confidence 344455555555688888889888899888888777766543 3 2577777777665 5666888899986542
Q ss_pred cC--------CCCCHHHHHHHHHhc-CCc
Q 048729 95 IN--------TRLDAHTLSVLLQHS-ESK 114 (330)
Q Consensus 95 l~--------~~~~~~~l~~~l~~~-~~~ 114 (330)
.. .+.+-+.+...++.. +..
T Consensus 213 ~s~~G~G~~aGN~~tE~lv~~l~~~~g~~ 241 (259)
T cd07939 213 VTVNGLGERAGNAALEEVVMALKHLYGRD 241 (259)
T ss_pred EecccccccccCcCHHHHHHHHHHhcCCC
Confidence 22 134456666666654 443
No 327
>PRK06381 threonine synthase; Validated
Probab=25.91 E-value=4.6e+02 Score=23.08 Aligned_cols=90 Identities=10% Similarity=0.029 Sum_probs=47.8
Q ss_pred CCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHH
Q 048729 30 DCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQ 109 (330)
Q Consensus 30 ~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~ 109 (330)
.++++-..+..-|.+-=.+.+..+...+.+.|. +.|. .....-.-...-++|...|..+..+-+...+......++
T Consensus 31 ~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~---~~lv-~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~ 106 (319)
T PRK06381 31 RKIYLKFEGANPTGTQKDRIAEAHVRRAMRLGY---SGIT-VGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEME 106 (319)
T ss_pred ceEEEEecCCCCccCcHHHHHHHHHHHHHHcCC---CEEE-EeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 356666655332221111223333333444453 3443 334443333344666677885555444334455566899
Q ss_pred hcCCcEEEEcccch
Q 048729 110 HSESKLVFVDHLHT 123 (330)
Q Consensus 110 ~~~~~~i~~~~~~~ 123 (330)
.++++++++...+.
T Consensus 107 ~~GA~V~~~~~~~~ 120 (319)
T PRK06381 107 KYGAEIIYVDGKYE 120 (319)
T ss_pred HcCCEEEEcCCCHH
Confidence 99999999987543
No 328
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=25.72 E-value=5e+02 Score=24.43 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=40.4
Q ss_pred ecHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEECCCCHHHHHHHHH-hhhcCcEEeec--C------
Q 048729 41 YTWSETHRRCLQV--------------A-SSLSSVGIQRGHVVSVVAPNVPSMYELQFG-VPMSGAILNNI--N------ 96 (330)
Q Consensus 41 ~T~~el~~~~~~~--------------a-~~L~~~g~~~gd~V~~~~~~~~~~~~~~la-~~~~G~~~~~l--~------ 96 (330)
-||.+|.+.+..+ | +.+...++++||.| +. ..++....+ +...|+.++=+ +
T Consensus 71 ~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----ps-n~~f~Tt~ahIe~~Gav~vDi~~dea~~~~ 145 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----PG-NMYFTTTRYHQEKNGATFVDIIIDEAHDAQ 145 (450)
T ss_pred CcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----CC-ceeHHHHHHHHHhCCeEEEeeecccccccc
Confidence 4677776665543 2 22335689999977 22 333333444 57778866655 2
Q ss_pred ------CCCCHHHHHHHHHhcC
Q 048729 97 ------TRLDAHTLSVLLQHSE 112 (330)
Q Consensus 97 ------~~~~~~~l~~~l~~~~ 112 (330)
..++++.+...++...
T Consensus 146 ~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 146 LNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cCCCCCCCcCHHHHHHHhcccc
Confidence 2457888888887643
No 329
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=25.49 E-value=4.8e+02 Score=23.11 Aligned_cols=55 Identities=16% Similarity=0.029 Sum_probs=27.4
Q ss_pred CCCCEEEEECCCCHHHHHHHHHhhhcCcE--EeecCC--CCCHHHHHHHHHhcCCcEEEE
Q 048729 63 QRGHVVSVVAPNVPSMYELQFGVPMSGAI--LNNINT--RLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 63 ~~gd~V~~~~~~~~~~~~~~la~~~~G~~--~~~l~~--~~~~~~l~~~l~~~~~~~i~~ 118 (330)
++||.|++..+.++... ....+-..|+. .+++++ ..+.+.+...++..++++++.
T Consensus 72 ~~g~~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i 130 (356)
T cd06451 72 EPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTL 130 (356)
T ss_pred CCCCEEEEecCCchhHH-HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEE
Confidence 56777766655444321 11223344543 333332 345667776666545665544
No 330
>TIGR02803 ExbD_1 TonB system transport protein ExbD, group 1. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=25.20 E-value=2.2e+02 Score=21.03 Aligned_cols=28 Identities=7% Similarity=-0.014 Sum_probs=13.5
Q ss_pred CCCEEEEECCCCHH--HHH-HHHHhhhcCcE
Q 048729 64 RGHVVSVVAPNVPS--MYE-LQFGVPMSGAI 91 (330)
Q Consensus 64 ~gd~V~~~~~~~~~--~~~-~~la~~~~G~~ 91 (330)
+...|.+....... .+. .+=.|-.+|..
T Consensus 84 ~~~~v~I~aD~~~~~~~vv~v~d~~~~aG~~ 114 (122)
T TIGR02803 84 KDTTIFFRADKTVDYGDLMKVMNLLRQAGYL 114 (122)
T ss_pred CCceEEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 34456666665533 233 33444455553
No 331
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=25.05 E-value=2.6e+02 Score=22.22 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=10.0
Q ss_pred HHHHHHHHhcCCcEEEE
Q 048729 102 HTLSVLLQHSESKLVFV 118 (330)
Q Consensus 102 ~~l~~~l~~~~~~~i~~ 118 (330)
....+.|+...+..+++
T Consensus 100 wa~EQaLrSG~c~aVL~ 116 (168)
T TIGR00623 100 ESMIRALRTGNYSVVIG 116 (168)
T ss_pred HHHHHHHHhCCCcEEEe
Confidence 45555666666666655
No 332
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=25.00 E-value=3.6e+02 Score=23.24 Aligned_cols=71 Identities=23% Similarity=0.119 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEe
Q 048729 17 TLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILN 93 (330)
Q Consensus 17 ~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~ 93 (330)
+.+++....+.-++++.+.|+-+..+-.++.+.+..+.+.+ ++-.+.+-..|...+ +.-.++++.+|+..+
T Consensus 153 ~~~~~~~~~~~g~~~i~l~DT~G~~~P~~v~~lv~~l~~~~------~~~~l~~H~Hnd~Gla~An~laA~~aGa~~i 224 (273)
T cd07941 153 ALATLKAAAEAGADWLVLCDTNGGTLPHEIAEIVKEVRERL------PGVPLGIHAHNDSGLAVANSLAAVEAGATQV 224 (273)
T ss_pred HHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHHHHHhC------CCCeeEEEecCCCCcHHHHHHHHHHcCCCEE
Confidence 44555555666688888888888888888877776666543 223577777777654 566688888898654
No 333
>PRK08960 hypothetical protein; Provisional
Probab=24.94 E-value=3.5e+02 Score=24.50 Aligned_cols=13 Identities=15% Similarity=0.233 Sum_probs=6.0
Q ss_pred CCCCEEEEECCCC
Q 048729 63 QRGHVVSVVAPNV 75 (330)
Q Consensus 63 ~~gd~V~~~~~~~ 75 (330)
.+||.|++..|..
T Consensus 114 ~~gd~vlv~~p~y 126 (387)
T PRK08960 114 DPGKHWLLADPGY 126 (387)
T ss_pred CCCCEEEEcCCCC
Confidence 4445555444443
No 334
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=24.71 E-value=2e+02 Score=20.66 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCc
Q 048729 51 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 90 (330)
Q Consensus 51 ~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~ 90 (330)
..+...+...|+.+++.|.+++..+.........+...|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 4556667788888888888888876655555555566776
No 335
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=24.69 E-value=2.4e+02 Score=22.56 Aligned_cols=44 Identities=7% Similarity=-0.034 Sum_probs=28.3
Q ss_pred eeecHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHHHHHHHHH
Q 048729 39 TTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFG 84 (330)
Q Consensus 39 ~~~T~~el~~~~~~~a~~L~~~-g~~~gd~V~~~~~~~~~~~~~~la 84 (330)
.-+||.|+...+.++|..+.+. +. +.+ +.+...+.-..++..+|
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~~~~-~~~-viV~i~~gg~~~A~~La 59 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITADLAD-ENP-LVLCVMGGGLVFTGQLL 59 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHHcCC-CCe-EEEEECCCcHHHHHHHH
Confidence 3469999999999999999853 32 233 33444444444444444
No 336
>COG4669 EscJ Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking and secretion]
Probab=24.57 E-value=4.4e+02 Score=22.36 Aligned_cols=64 Identities=14% Similarity=0.097 Sum_probs=41.3
Q ss_pred HHHHHHHhcCcCcceEEEEeecC---CCC-C---ceeEEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCc
Q 048729 236 AEVESVLYSITAVNEAAVVARPD---MFW-G---EIPCAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPR 301 (330)
Q Consensus 236 ~~iE~~l~~~~~v~~~~v~~~~~---~~~-~---~~~~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~ 301 (330)
.+||+.|..++||-.+-|-..-. +.+ . -..-+|+.-.++.+ .......|++.+.+.++....-.
T Consensus 112 Q~le~tLs~mDGVi~ArV~I~lp~~~~~g~~~~P~saSVfIky~~~~n--l~~~v~~IK~LV~nSv~gL~Yen 182 (246)
T COG4669 112 QQLEQTLSKMDGVISARVHISLPEDDDEGKNALPSSASVFIKYSPDVN--LSIYVSQIKRLVANSVPGLQYEN 182 (246)
T ss_pred HHHHHHHHhcCceEEEEEEEEcCCCCccCCCCCCceeEEEEEecCCCC--hhHhHHHHHHHHHhccCCCchhc
Confidence 57999999999999888775522 111 1 12345555554433 22566889999999887665443
No 337
>KOG0391 consensus SNF2 family DNA-dependent ATPase [General function prediction only]
Probab=24.34 E-value=2.2e+02 Score=30.41 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcE-EEEcccchHHHH
Q 048729 49 RCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKL-VFVDHLHTYLLL 127 (330)
Q Consensus 49 ~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~-i~~~~~~~~~~~ 127 (330)
..+.+|-.|+.+.. .|.||+|+..++-.+-+.-.=+...|...+-|+...+.+....+++.++.+- |||.-
T Consensus 1261 KLQtLAiLLqQLk~-eghRvLIfTQMtkmLDVLeqFLnyHgylY~RLDg~t~vEqRQaLmerFNaD~RIfcfI------- 1332 (1958)
T KOG0391|consen 1261 KLQTLAILLQQLKS-EGHRVLIFTQMTKMLDVLEQFLNYHGYLYVRLDGNTSVEQRQALMERFNADRRIFCFI------- 1332 (1958)
T ss_pred hHHHHHHHHHHHHh-cCceEEehhHHHHHHHHHHHHHhhcceEEEEecCCccHHHHHHHHHHhcCCCceEEEE-------
Confidence 34667777776553 6889999999886554444445678999999999999999999999998743 44321
Q ss_pred HHhccCchHHHHhhccCCcccCceeEEEeCCCCCccc
Q 048729 128 EALSLFPQRARLKARQGVKTVGLAEVDVVNPETGESV 164 (330)
Q Consensus 128 ~~~~~~~~~~~~~~~~G~~~~g~te~~i~d~~~g~~~ 164 (330)
..-..+..|.++-|.-.+...|. +.++.
T Consensus 1333 --------LSTrSggvGiNLtgADTVvFYDs-DwNPt 1360 (1958)
T KOG0391|consen 1333 --------LSTRSGGVGINLTGADTVVFYDS-DWNPT 1360 (1958)
T ss_pred --------EeccCCccccccccCceEEEecC-CCCch
Confidence 11124566777777633444554 44443
No 338
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=24.24 E-value=3e+02 Score=24.31 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=48.3
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEe-ecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 61 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN-NINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 61 g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~-~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
.+++||-|..=..||.---..+--|-..|.-.+ .+-.+-..+++...|+..+++.+|+.+++.+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 678999999988888554444444445566443 4556777899999999999999999887764
No 339
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=24.22 E-value=60 Score=15.52 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=16.2
Q ss_pred cCCCCCCCCcccHHHHHHHhhh
Q 048729 307 EELPKTSTGKIQKYLLREFAKS 328 (330)
Q Consensus 307 ~~lP~t~~GKv~r~~l~~~~~~ 328 (330)
..+..+.+|.+....+...+.+
T Consensus 7 ~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 7 RLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHCCCCCCcEeHHHHHHHHHh
Confidence 3455677888998888887765
No 340
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=24.07 E-value=3.1e+02 Score=27.56 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=40.7
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC---------CH-----HHHHHHHHhcC-C----cEEEEcccc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL---------DA-----HTLSVLLQHSE-S----KLVFVDHLH 122 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~---------~~-----~~l~~~l~~~~-~----~~i~~~~~~ 122 (330)
+++||.|+ +-.|++-.+.. |+..+|+.++-+.|.. ++ +.+...+++.. + .++++.|.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY 308 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC
Confidence 57999766 66777776555 8999999999886543 23 77888887652 2 345666654
Q ss_pred h
Q 048729 123 T 123 (330)
Q Consensus 123 ~ 123 (330)
.
T Consensus 309 d 309 (713)
T PRK15399 309 D 309 (713)
T ss_pred C
Confidence 3
No 341
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=24.05 E-value=77 Score=27.26 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=47.1
Q ss_pred HHHHHHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCC--HHHHHHHHHhc-CCcEEEEcc
Q 048729 54 ASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLD--AHTLSVLLQHS-ESKLVFVDH 120 (330)
Q Consensus 54 a~~L~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~--~~~l~~~l~~~-~~~~i~~~~ 120 (330)
-..+.+.-..||.-=.+.+|.++.+....-++.-++.+-+|+++.++ .+++..+++.- .++++|.++
T Consensus 99 ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 99 IDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 33344445568844445666666665555788888999999998555 67888888776 899998754
No 342
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=24.04 E-value=4e+02 Score=21.69 Aligned_cols=87 Identities=7% Similarity=-0.016 Sum_probs=55.5
Q ss_pred CeeecHHHHHHHHHHHHHHHHHc-------CCCCCCEEEEECCCC--HHHHHHH--HHhhhcCcEEeecCCCCCHHHHHH
Q 048729 38 NTTYTWSETHRRCLQVASSLSSV-------GIQRGHVVSVVAPNV--PSMYELQ--FGVPMSGAILNNINTRLDAHTLSV 106 (330)
Q Consensus 38 ~~~~T~~el~~~~~~~a~~L~~~-------g~~~gd~V~~~~~~~--~~~~~~~--la~~~~G~~~~~l~~~~~~~~l~~ 106 (330)
..+++..|.+..++.+-..+..+ +...+-+|.+....+ ++.-..+ ..+-..|.-++-+....+.+++..
T Consensus 48 ~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~ 127 (201)
T cd02070 48 EGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVE 127 (201)
T ss_pred cCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 46788888887666555544321 221233554444432 4442222 333367888888889999999999
Q ss_pred HHHhcCCcEEEEcccchH
Q 048729 107 LLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 107 ~l~~~~~~~i~~~~~~~~ 124 (330)
.+.+.+|+++..+.....
T Consensus 128 ~~~~~~~d~v~lS~~~~~ 145 (201)
T cd02070 128 AVKEHKPDILGLSALMTT 145 (201)
T ss_pred HHHHcCCCEEEEeccccc
Confidence 999999999887654333
No 343
>COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]
Probab=24.03 E-value=80 Score=27.86 Aligned_cols=90 Identities=21% Similarity=0.172 Sum_probs=51.9
Q ss_pred ceEEEecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCCc-ccCCCCCHH
Q 048729 206 DIGVMHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRDL-ELTKKPTEK 284 (330)
Q Consensus 206 D~~~~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~ 284 (330)
|++.--.+|.+++.+|...-|. | +++..++++....- -++.+....+..+...+...... -.....+..
T Consensus 52 diAekyG~G~i~iT~rqg~ei~--~--i~~e~~~~v~~~L~------~iG~~~G~~G~~vr~i~aC~G~~~C~~a~~Dt~ 121 (317)
T COG2221 52 DIAEKYGDGLIHITSRQGLEIP--G--ISPEDADDVVEELR------EIGLPVGSTGPAVRAIVACPGPRTCETALYDTT 121 (317)
T ss_pred HHHHHhCCCeEEEEecCceEec--c--CCHHHHHHHHHHHH------HcCCCCCCcchhhhhhhcCcCcccccccccChH
Confidence 3444456899999999986665 2 66666666554433 22333333333333333222211 122236778
Q ss_pred HHHHHHHhcCCCCCCCceEEE
Q 048729 285 EIIEYCRARLPRYMVPRKVVF 305 (330)
Q Consensus 285 ~l~~~l~~~l~~~~~p~~~~~ 305 (330)
++.+.+.+.+.....|..|.+
T Consensus 122 ~la~~l~e~f~~~~~P~KfKI 142 (317)
T COG2221 122 ELARRLEEEFLEVPVPYKFKI 142 (317)
T ss_pred HHHHHHHHHhhcCCCCceEEE
Confidence 888888888777777776654
No 344
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=24.01 E-value=1.2e+02 Score=20.06 Aligned_cols=27 Identities=7% Similarity=0.023 Sum_probs=22.4
Q ss_pred CCeeecHHHHHHHHHHHHHHHHHcCCC
Q 048729 37 NNTTYTWSETHRRCLQVASSLSSVGIQ 63 (330)
Q Consensus 37 ~~~~~T~~el~~~~~~~a~~L~~~g~~ 63 (330)
.++.+|..++.+.++++.+++.+.|.-
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~ 53 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYI 53 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-T
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCce
Confidence 367899999999999999999998863
No 345
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=23.94 E-value=3.1e+02 Score=21.99 Aligned_cols=56 Identities=25% Similarity=0.200 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCC----eeecHH-HH-HHHHHHHHHHHHHcCCCCCCEEEEE
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNN----TTYTWS-ET-HRRCLQVASSLSSVGIQRGHVVSVV 71 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~----~~~T~~-el-~~~~~~~a~~L~~~g~~~gd~V~~~ 71 (330)
....+-+.+.++.+|.....+.+. ++=.|- .| .++++.++.+|...|+.++ ++...
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 456677778889999877777632 333343 33 4899999999999998777 55544
No 346
>PRK06234 methionine gamma-lyase; Provisional
Probab=23.80 E-value=5.3e+02 Score=23.66 Aligned_cols=55 Identities=16% Similarity=0.311 Sum_probs=30.6
Q ss_pred CCCCCEEEEECCCCHHHHHH-HHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYEL-QFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~-~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|.+..+........ ..++-..|+.+..++.. +.+.+...++. +.++++.
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~i 155 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYL 155 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEE
Confidence 46788776666544333322 23445667777666643 45666666643 4555553
No 347
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=23.76 E-value=84 Score=19.91 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=17.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCC
Q 048729 53 VASSLSSVGIQRGHVVSVVAPN 74 (330)
Q Consensus 53 ~a~~L~~~g~~~gd~V~~~~~~ 74 (330)
-..||.++|+..|+.|-+....
T Consensus 29 ~G~WL~~aGF~~G~~v~V~v~~ 50 (57)
T PF08845_consen 29 KGKWLEEAGFTIGDPVKVRVMP 50 (57)
T ss_pred chhhhHHhCCCCCCEEEEEEEC
Confidence 3678999999999988776543
No 348
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=23.19 E-value=6e+02 Score=23.44 Aligned_cols=93 Identities=19% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHhhhc
Q 048729 10 ANSTPLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMS 88 (330)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~-~g~~~gd~V~~~~~~~~~~~~~~la~~~~ 88 (330)
.|.......++|...++.....+ .++.+...++...+.. ...-.|.+|+++......+-+.-+ +..+
T Consensus 229 ~PiGi~~T~~~l~~la~~~g~~~-----------~~~~~e~~~~~~~l~~~~~~l~Gkrv~i~gd~~~~~~l~~~-L~el 296 (407)
T TIGR01279 229 FPFGPDGTRRFLEAIAAEFGIEV-----------DKLSEREAQAWRALEPHTQLLRGKKIFFFGDNLLELPLARF-LKRC 296 (407)
T ss_pred CCcCHHHHHHHHHHHHHHhCcCH-----------HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCchHHHHHHHH-HHHC
Confidence 34444556667776666543221 0122233333333331 112257799999886655433322 2247
Q ss_pred CcEEeecCCCCC-HHHHHHHHHhcCCc
Q 048729 89 GAILNNINTRLD-AHTLSVLLQHSESK 114 (330)
Q Consensus 89 G~~~~~l~~~~~-~~~l~~~l~~~~~~ 114 (330)
|..++....... .+.....++.....
T Consensus 297 Gm~~v~~~t~~~~~~~~~~~~~~l~~~ 323 (407)
T TIGR01279 297 GMEVVECGTPYIHRRFHAAELALLEGG 323 (407)
T ss_pred CCEEEEecCCCCChHHHHHHHhhcCCC
Confidence 998877765443 33334444444433
No 349
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=23.11 E-value=4e+02 Score=21.91 Aligned_cols=69 Identities=25% Similarity=0.361 Sum_probs=40.0
Q ss_pred HHHHHHHhcCcCcceEEEEeec-CC-CCC---cee--EEEEEecCCcccCCCCCHHHHHHHHHhcCCCCCCCceEEEcc
Q 048729 236 AEVESVLYSITAVNEAAVVARP-DM-FWG---EIP--CAFVSLKRDLELTKKPTEKEIIEYCRARLPRYMVPRKVVFSE 307 (330)
Q Consensus 236 ~~iE~~l~~~~~v~~~~v~~~~-~~-~~~---~~~--~~~v~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~ 307 (330)
.++|+.|..+++|..+.|...- +. ... +.. -+++.++++...+ ...+.|+..+....+... |..+.+++
T Consensus 118 ~eL~~tI~~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~--~qv~~I~~LVa~sV~gL~-~enVtVvD 193 (206)
T PF01514_consen 118 GELERTIESIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS--EQVQGIQNLVASSVPGLK-PENVTVVD 193 (206)
T ss_dssp HHHHHHHTTSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G--GGHHHHHHHHHHHSTT---GGGEEEEE
T ss_pred HHHHHHHHcCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH--HHHHHHHHHHHHhcCCCC-cccEEEEe
Confidence 4899999999999999887442 22 111 123 3455555665422 456788888888775443 45555554
No 350
>PRK07476 eutB threonine dehydratase; Provisional
Probab=23.06 E-value=5.3e+02 Score=22.80 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=30.4
Q ss_pred HHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 81 LQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 81 ~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
.-+++...|..+..+-|...+......++.++++++++...+..
T Consensus 82 lA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (322)
T PRK07476 82 LAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDD 125 (322)
T ss_pred HHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 33566678886655555445556677889999999998865443
No 351
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain. 2-isopropylmalate synthase (IPMS) catalyzes an aldol-type condensation of acetyl-CoA and 2-oxoisovalerate yielding 2-isopropylmalate and CoA, the first committed step in leucine biosynthesis. This family includes the Arabidopsis thaliana IPMS1 and IPMS2 proteins, the Glycine max GmN56 protein, and the Brassica insularis BatIMS protein. This family also includes a group of archeal IPMS-like proteins represented by the Methanocaldococcus jannaschii AksA protein. AksA catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate, one of 13 steps in the conversion of alpha-ketoglutarate and acetylCoA to alpha-ketosuberate, a precursor to coenzyme B and biotin. AksA also catalyzes the condensation of alpha-ketoadipate or alpha-ketopimelate with acetylCoA to form, respectively, the (R)-homocitrate homologs (R)-2-hydroxy-1,2,5-pentanetricarboxylic acid and (R)-2-h
Probab=22.74 E-value=4.1e+02 Score=22.74 Aligned_cols=93 Identities=13% Similarity=0.001 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEe-
Q 048729 16 TTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILN- 93 (330)
Q Consensus 16 ~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~- 93 (330)
-+.+++.+..+.-++.+.+.|+.+..+-.++.+.+..+.+.+.. +.-.+.+-+.|...+ +...++++.+|+..+
T Consensus 144 ~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~----~~i~l~~H~Hn~~GlA~An~laAi~aG~~~iD 219 (268)
T cd07940 144 FLIEVVEAAIEAGATTINIPDTVGYLTPEEFGELIKKLKENVPN----IKVPISVHCHNDLGLAVANSLAAVEAGARQVE 219 (268)
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCC----CceeEEEEecCCcchHHHHHHHHHHhCCCEEE
Confidence 34445555555557888888888888888888877777765411 013577777777665 556677888887554
Q ss_pred ----ecC---CCCCHHHHHHHHHhcC
Q 048729 94 ----NIN---TRLDAHTLSVLLQHSE 112 (330)
Q Consensus 94 ----~l~---~~~~~~~l~~~l~~~~ 112 (330)
.+. .+.+-+.+...+...+
T Consensus 220 ~s~~GlG~~aGN~~tE~lv~~L~~~~ 245 (268)
T cd07940 220 CTINGIGERAGNAALEEVVMALKTRY 245 (268)
T ss_pred EEeeccccccccccHHHHHHHHHhcc
Confidence 221 2334456666666554
No 352
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=22.68 E-value=4.4e+02 Score=23.62 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~ 93 (330)
.-+.+++....+.-++.+.+.|+.+.++-.++.+.+..+-+.+ .+.-.|.+-+.|+..+ +.-.++++.+|+..+
T Consensus 143 e~l~~~a~~~~~~Ga~~i~i~DT~G~~~P~~v~~~v~~l~~~l-----~~~i~ig~H~HnnlGla~ANslaAi~aGa~~i 217 (333)
T TIGR03217 143 EKLAEQAKLMESYGADCVYIVDSAGAMLPDDVRDRVRALKAVL-----KPETQVGFHAHHNLSLAVANSIAAIEAGATRI 217 (333)
T ss_pred HHHHHHHHHHHhcCCCEEEEccCCCCCCHHHHHHHHHHHHHhC-----CCCceEEEEeCCCCchHHHHHHHHHHhCCCEE
Confidence 3455566665566688889999999999999888888777654 2334688888887665 555577788998654
Q ss_pred ecC--------CCCCHHHHHHHHHhcCC
Q 048729 94 NIN--------TRLDAHTLSVLLQHSES 113 (330)
Q Consensus 94 ~l~--------~~~~~~~l~~~l~~~~~ 113 (330)
=.+ .+.+-+.+...++..+.
T Consensus 218 D~Sl~G~G~~aGN~~~E~lv~~l~~~g~ 245 (333)
T TIGR03217 218 DASLRGLGAGAGNAPLEVFVAVLDRLGW 245 (333)
T ss_pred EeecccccccccCccHHHHHHHHHhcCC
Confidence 221 13445566666665543
No 353
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=22.54 E-value=5.1e+02 Score=22.40 Aligned_cols=66 Identities=8% Similarity=0.056 Sum_probs=40.0
Q ss_pred HHHHcCC-CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccc
Q 048729 56 SLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLH 122 (330)
Q Consensus 56 ~L~~~g~-~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~ 122 (330)
.+.+.|. ++|+.|.....-+....++ +++...|..+..+-+...+......++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv~~SsGN~g~alA-~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTIIEPTSGNTGIGLA-MVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEEEeCCChHHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3344453 3566665533333333333 5666788866555444444556679999999999998765
No 354
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=22.45 E-value=5.2e+02 Score=22.47 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=52.3
Q ss_pred CCcEEEeCCeeecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHH
Q 048729 30 DCPSLVYNNTTYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLL 108 (330)
Q Consensus 30 ~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g-~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l 108 (330)
.++.+-..+..-|.+-=.+.+..+.....+.| +.+|+.|.....-+....++ ++|...|..+..+-|...+......+
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g~~vv~aSsGN~g~alA-~~a~~~G~~~~i~~p~~~~~~k~~~~ 101 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGDVLIEATSGNTGIALA-MIAALKGYRMKLLMPDNMSQERKAAM 101 (290)
T ss_pred CeEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 35555555544343333333333334444445 47777666544444444444 56667888666555544445566789
Q ss_pred HhcCCcEEEEcc
Q 048729 109 QHSESKLVFVDH 120 (330)
Q Consensus 109 ~~~~~~~i~~~~ 120 (330)
+.++++++.+..
T Consensus 102 ~~~GA~v~~v~~ 113 (290)
T TIGR01138 102 RAYGAELILVTK 113 (290)
T ss_pred HHcCCEEEEeCC
Confidence 999999999875
No 355
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=22.33 E-value=3.3e+02 Score=21.24 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=27.9
Q ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Q 048729 41 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 81 (330)
Q Consensus 41 ~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~~~~ 81 (330)
+||.|+.+.++++|..+...| + -|.|.-.+..+.-+...
T Consensus 10 is~~~i~~~i~~la~~I~~~~-~-~d~vvgv~~GG~~fa~~ 48 (156)
T PRK09177 10 VSWDQLHRDARALAWRLLPAG-Q-WKGIIAVTRGGLVPAAI 48 (156)
T ss_pred cCHHHHHHHHHHHHHHHHhhC-C-CCEEEEEecCCeehHHH
Confidence 799999999999999998654 2 35665555555444333
No 356
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=22.33 E-value=2.6e+02 Score=25.81 Aligned_cols=61 Identities=10% Similarity=0.034 Sum_probs=32.2
Q ss_pred CCCCEEEEECCCCHHHH-----HHH----HHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 63 QRGHVVSVVAPNVPSMY-----ELQ----FGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 63 ~~gd~V~~~~~~~~~~~-----~~~----la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
+|||+|+.+...+=.++ ... ...........++++ ...-+++.+++++.+|++|++..+..
T Consensus 108 ~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y 180 (399)
T PF00464_consen 108 KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY 180 (399)
T ss_dssp -TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST
T ss_pred hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhc
Confidence 67777777665542221 111 022233445556663 44568999999999999999986543
No 357
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=22.33 E-value=4.4e+02 Score=22.51 Aligned_cols=93 Identities=11% Similarity=0.012 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEEe
Q 048729 15 LTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILN 93 (330)
Q Consensus 15 ~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~~ 93 (330)
.-+.+++....+.-++.+.+.|+-+..+=.++.+.+..+.+.+ +. -.+.+-+.|...+ +.-.++++.+|+..+
T Consensus 141 ~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~v~~lv~~l~~~~---~~---~~l~~H~Hn~~GlA~AN~laAi~aGa~~v 214 (263)
T cd07943 141 EELAEQAKLMESYGADCVYVTDSAGAMLPDDVRERVRALREAL---DP---TPVGFHGHNNLGLAVANSLAAVEAGATRI 214 (263)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhC---CC---ceEEEEecCCcchHHHHHHHHHHhCCCEE
Confidence 3455556665666688888888888888888777777666443 21 2577777777665 556688888897654
Q ss_pred ecC--------CCCCHHHHHHHHHhcCC
Q 048729 94 NIN--------TRLDAHTLSVLLQHSES 113 (330)
Q Consensus 94 ~l~--------~~~~~~~l~~~l~~~~~ 113 (330)
=.. .+.+-+.+...++..+.
T Consensus 215 d~s~~GlG~~aGN~~~E~lv~~L~~~g~ 242 (263)
T cd07943 215 DGSLAGLGAGAGNTPLEVLVAVLERMGI 242 (263)
T ss_pred EeecccccCCcCCccHHHHHHHHHhcCC
Confidence 222 13445666666665443
No 358
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=22.16 E-value=4.4e+02 Score=24.06 Aligned_cols=73 Identities=14% Similarity=-0.042 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEeCCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHhhhcCcEE
Q 048729 14 PLTTLGFLERAAAAYTDCPSLVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAIL 92 (330)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~T~~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~-~~~~la~~~~G~~~ 92 (330)
+.-+.+++....+.-++.+.+.|+.+..+=.++.+.+..+...+ ++ .+.+-+.|...+ ++-.++++.+|+..
T Consensus 144 ~~~l~~~~~~~~~~Ga~~I~l~DT~G~~~P~~v~~lv~~l~~~~---~~----~l~~H~Hnd~GlA~AN~laAv~aGa~~ 216 (378)
T PRK11858 144 LDFLIEFAKAAEEAGADRVRFCDTVGILDPFTMYELVKELVEAV---DI----PIEVHCHNDFGMATANALAGIEAGAKQ 216 (378)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHHHHHhc---CC----eEEEEecCCcCHHHHHHHHHHHcCCCE
Confidence 33455555555555688888889888888888888887776554 22 578888887665 55668888999865
Q ss_pred e
Q 048729 93 N 93 (330)
Q Consensus 93 ~ 93 (330)
+
T Consensus 217 v 217 (378)
T PRK11858 217 V 217 (378)
T ss_pred E
Confidence 5
No 359
>PRK06382 threonine dehydratase; Provisional
Probab=21.79 E-value=6.4e+02 Score=23.24 Aligned_cols=44 Identities=2% Similarity=0.027 Sum_probs=30.5
Q ss_pred HHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccchH
Q 048729 81 LQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 81 ~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 124 (330)
.-+++...|..+..+-|...+......++.++++++++...+.+
T Consensus 88 ~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 88 VAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred HHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 34677778886555555455555667799999999988775443
No 360
>PF03790 KNOX1: KNOX1 domain ; InterPro: IPR005540 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=21.77 E-value=80 Score=18.94 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=17.7
Q ss_pred CCCCHHHHHHHHHhhhcCcEE
Q 048729 72 APNVPSMYELQFGVPMSGAIL 92 (330)
Q Consensus 72 ~~~~~~~~~~~la~~~~G~~~ 92 (330)
.|..+.++.+.+.|.+.|+.+
T Consensus 10 HP~Y~~Ll~Ayi~C~KVGAP~ 30 (45)
T PF03790_consen 10 HPLYPRLLAAYIDCQKVGAPP 30 (45)
T ss_pred CCCcHHHHHHHHHHHhcCCCH
Confidence 466788899999999999864
No 361
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=21.77 E-value=5.7e+02 Score=23.19 Aligned_cols=55 Identities=7% Similarity=0.149 Sum_probs=34.8
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC------CCCHHHHHHHHHhc------CCcEEEEc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT------RLDAHTLSVLLQHS------ESKLVFVD 119 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~------~~~~~~l~~~l~~~------~~~~i~~~ 119 (330)
+++||.|.+..+.++.. +.++...|+.++.++. ..+.+.+...++.. ++++++..
T Consensus 99 ~~~gd~Vlv~~~~h~s~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDGLAHYTS---YVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECCCchHHH---HHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 36899887764444333 2345677887766653 25678888888753 56766654
No 362
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=21.72 E-value=5.2e+02 Score=24.06 Aligned_cols=55 Identities=15% Similarity=0.282 Sum_probs=27.8
Q ss_pred CCCCCEEEEECCCCHHHHHHH-HHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 62 IQRGHVVSVVAPNVPSMYELQ-FGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~-la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
+++||.|++..+........+ ..+...|+.+..++. .+.+.+...++. ++++++.
T Consensus 100 l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-~d~e~l~~ai~~-~tklV~l 155 (431)
T PRK08248 100 ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-SDPENFEAAITD-KTKALFA 155 (431)
T ss_pred hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-CCHHHHHHhcCC-CCeEEEE
Confidence 467777666554332222222 223456666666654 345566655543 4555544
No 363
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=21.60 E-value=6e+02 Score=23.40 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCC---CCCHHHHHHHHHhcCCcEEEEc
Q 048729 63 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT---RLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 63 ~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
++||.|++..|....+.. .+...|+.+++++. .+..+.+...++. ++++++..
T Consensus 163 ~pgd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~-~~k~i~~~ 218 (431)
T PRK15481 163 LPGDSVAVEDPCFLSSIN---MLRYAGFSASPVSVDAEGMQPEKLERALAQ-GARAVILT 218 (431)
T ss_pred CCCCEEEEeCCCcHHHHH---HHHHcCCeEEeeccCCCCCCHHHHHHHHhc-CCCEEEEC
Confidence 577888777776554432 23345665554432 4556677666654 56665543
No 364
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=21.37 E-value=2.8e+02 Score=22.93 Aligned_cols=49 Identities=18% Similarity=0.233 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCCcEEEeCC-----------eeecHHHHHHHHHHHHHHHHHcCCCCC
Q 048729 17 TLGFLERAAAAYTDCPSLVYNN-----------TTYTWSETHRRCLQVASSLSSVGIQRG 65 (330)
Q Consensus 17 ~~~~l~~~~~~~p~~~a~~~~~-----------~~~T~~el~~~~~~~a~~L~~~g~~~g 65 (330)
+.|-+.+..+.+|+..|+..++ ++-|..|-.+-.-.+|-.+.+.|+.|.
T Consensus 169 L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgipp~ 228 (238)
T KOG2631|consen 169 LKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIPPE 228 (238)
T ss_pred HHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Confidence 4588999999999999998643 446667777777777877888887643
No 365
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=21.36 E-value=5.2e+02 Score=22.77 Aligned_cols=57 Identities=11% Similarity=-0.012 Sum_probs=37.0
Q ss_pred HHcCCCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 048729 58 SSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFV 118 (330)
Q Consensus 58 ~~~g~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~ 118 (330)
...++++|++|++...-.....+..+ +...|+.++.+..+ +++ ..++++.+++.++.
T Consensus 159 ~~~~~~~g~~VlV~G~g~iG~~a~~~-a~~~G~~vi~~~~~--~~~-~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 159 LRASLPPGGRLGLYGFGGSAHLTAQV-ALAQGATVHVMTRG--AAA-RRLALALGAASAGG 215 (329)
T ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHH-HHHCCCeEEEEeCC--hHH-HHHHHHhCCceecc
Confidence 35688999999999874455444444 44568866555432 333 46778888877654
No 366
>PLN02368 alanine transaminase
Probab=21.36 E-value=6e+02 Score=23.44 Aligned_cols=65 Identities=11% Similarity=-0.044 Sum_probs=27.6
Q ss_pred HHHHHHHHHH-cC--CCCCCEEEEECCCCHHHHHHHHHhh-hcCcEEeecCCCCCHHHHHHHHHhcCCcEEE
Q 048729 50 CLQVASSLSS-VG--IQRGHVVSVVAPNVPSMYELQFGVP-MSGAILNNINTRLDAHTLSVLLQHSESKLVF 117 (330)
Q Consensus 50 ~~~~a~~L~~-~g--~~~gd~V~~~~~~~~~~~~~~la~~-~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~ 117 (330)
-+.+|+++.+ .| +.+. .|.+.......+..++.++. .-|-.++...|.+..- ...++..+.+++.
T Consensus 113 R~aia~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y--~~~~~~~g~~~v~ 181 (407)
T PLN02368 113 RKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLY--SATISLLGGTLVP 181 (407)
T ss_pred HHHHHHHHHHhcCCCCChh-hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccH--HHHHHHcCCEEEE
Confidence 3555566642 35 3333 34443333333333333443 2454444444555422 2334445555443
No 367
>KOG0330 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=21.32 E-value=2.3e+02 Score=26.08 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=40.6
Q ss_pred CCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcC---CcEEEEcc
Q 048729 64 RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSE---SKLVFVDH 120 (330)
Q Consensus 64 ~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~---~~~i~~~~ 120 (330)
.|-.+.+++..+...-..-+.+-.+|...+|++..++...-...+++++ .+++++++
T Consensus 299 ~g~s~iVF~~t~~tt~~la~~L~~lg~~a~~LhGqmsq~~Rlg~l~~Fk~~~r~iLv~TD 358 (476)
T KOG0330|consen 299 AGNSVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSILVCTD 358 (476)
T ss_pred cCCcEEEEEeccchHHHHHHHHHhcCcceecccchhhHHHHHHHHHHHhccCCcEEEecc
Confidence 4457888888776665555667788999999999999887666666555 35555544
No 368
>cd06410 PB1_UP2 Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=21.25 E-value=3.1e+02 Score=19.49 Aligned_cols=62 Identities=16% Similarity=0.084 Sum_probs=39.6
Q ss_pred EecCceEEEEecCCCeEEeCCeecCHHHHHHHHhcCcCcceEEEEeecCCCCCceeEEEEEecCC
Q 048729 210 MHADGYVEIKDRSKDVIISGGENICSAEVESVLYSITAVNEAAVVARPDMFWGEIPCAFVSLKRD 274 (330)
Q Consensus 210 ~~~~G~l~~~GR~dd~ik~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 274 (330)
+..+|.+.+.|-.-..+.+.-- ++..++...+.++-++.....+-..-+. +-+.+++.+..+
T Consensus 11 r~~dg~l~Y~GG~tr~i~V~r~-~s~~el~~kl~~~~~~~~~~~lky~Lp~--edld~Lisv~~D 72 (97)
T cd06410 11 RPPDGQLRYVGGETRIVSVDRS-ISFKELVSKLSELFGAGVVVTLKYQLPD--EDLDALISVSND 72 (97)
T ss_pred cCCCCCEEEcCCceEEEEEcCC-CCHHHHHHHHHHHhCCCCceEEEEEcCC--CCcceeEEecCc
Confidence 3568889888877777775433 8889999999887666654444444332 223355555554
No 369
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=21.11 E-value=5.9e+02 Score=22.63 Aligned_cols=76 Identities=9% Similarity=-0.046 Sum_probs=35.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCC-EEEEECCCCHHHHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 42 TWSETHRRCLQVASSLSSVGIQRGH-VVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 42 T~~el~~~~~~~a~~L~~~g~~~gd-~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
.|.++.+.+++....| .|.+++. .|++...-+..+..++.++...|...+.+.+..-...+..+.+..+.++....
T Consensus 32 ~~~~~~~~~r~~la~l--~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 32 DYNIVVEQIRQQLLAL--ATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHHHHHHH--hCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 3555544444333333 3555543 34444433444444444555555443333333323344556666777666543
No 370
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=21.07 E-value=5.8e+02 Score=22.53 Aligned_cols=77 Identities=8% Similarity=-0.038 Sum_probs=40.0
Q ss_pred cHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH-HHHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 048729 42 TWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 42 T~~el~~~~~~~a~~L~-~~g~~~gd~V~~~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
.|....+..+++...+. -.|..+.+ +.++.+++.+ ....+.+.+..|-.++...+..........++..+.+++...
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 34444444444444444 33664444 4444555444 344445666667766554443333334566777787777664
No 371
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=20.99 E-value=6.1e+02 Score=22.94 Aligned_cols=11 Identities=0% Similarity=0.087 Sum_probs=6.5
Q ss_pred CHHHHHHHHHh
Q 048729 282 TEKEIIEYCRA 292 (330)
Q Consensus 282 ~~~~l~~~l~~ 292 (330)
..+++.+.+.+
T Consensus 334 ~~~~l~~~L~~ 344 (398)
T TIGR03392 334 HHSDLAALLAE 344 (398)
T ss_pred CHHHHHHHHHh
Confidence 34667666654
No 372
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=20.91 E-value=6.4e+02 Score=23.49 Aligned_cols=19 Identities=32% Similarity=0.232 Sum_probs=13.7
Q ss_pred HHHHHHHHhcCcCcceEEE
Q 048729 235 SAEVESVLYSITAVNEAAV 253 (330)
Q Consensus 235 ~~~iE~~l~~~~~v~~~~v 253 (330)
...+-+.|..||.|..+.-
T Consensus 303 A~~la~~L~~~p~V~~V~y 321 (433)
T PRK08134 303 TRKVVAFLASHPAVARVAH 321 (433)
T ss_pred HHHHHHHHHhCCCccEEEC
Confidence 3456677889999887743
No 373
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=20.79 E-value=4.9e+02 Score=21.53 Aligned_cols=86 Identities=3% Similarity=0.009 Sum_probs=56.5
Q ss_pred CeeecHHHHHHHHHHHHHHHH-------HcC-C--CCCCEEEEECCCC--HHHHHHH--HHhhhcCcEEeecCCCCCHHH
Q 048729 38 NTTYTWSETHRRCLQVASSLS-------SVG-I--QRGHVVSVVAPNV--PSMYELQ--FGVPMSGAILNNINTRLDAHT 103 (330)
Q Consensus 38 ~~~~T~~el~~~~~~~a~~L~-------~~g-~--~~gd~V~~~~~~~--~~~~~~~--la~~~~G~~~~~l~~~~~~~~ 103 (330)
.+++|-.|.+..++.+...+. ... - ..+ +|.+..+.. ++.-..+ .-+-..|.-++-+..+.+++.
T Consensus 52 ~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~-~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 52 AGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKG-KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC-eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 467888888766655555443 222 1 223 444444433 4443333 334467999999999999999
Q ss_pred HHHHHHhcCCcEEEEcccchH
Q 048729 104 LSVLLQHSESKLVFVDHLHTY 124 (330)
Q Consensus 104 l~~~l~~~~~~~i~~~~~~~~ 124 (330)
+...+.+.+|+++..+.....
T Consensus 131 ~v~~~~~~~~~~V~lS~~~~~ 151 (213)
T cd02069 131 ILEAAKEHKADIIGLSGLLVP 151 (213)
T ss_pred HHHHHHHcCCCEEEEccchhc
Confidence 999999999999987654443
No 374
>KOG2713 consensus Mitochondrial tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=20.57 E-value=2.7e+02 Score=24.37 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHhhh
Q 048729 44 SETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPM 87 (330)
Q Consensus 44 ~el~~~~~~~a~~L~~~g~~~gd~V~~~~~~~~~~--~~~~la~~~ 87 (330)
++|.+....++..|.++|+.|....+++-+.-+.. +.++|+|+.
T Consensus 68 ~~lrq~~~dm~A~lLAcGIdp~Ks~lF~QS~Vpqh~el~WlLsslt 113 (347)
T KOG2713|consen 68 AELRQATHDMAASLLACGIDPEKSSLFVQSDVPQHAELSWLLSSLT 113 (347)
T ss_pred HHHHHHHHHHHHHHHHhccCcccceeeeeccchHHHHHHHHHHhcc
Confidence 58999999999999999999998877777766655 455566653
No 375
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=20.53 E-value=3.9e+02 Score=20.30 Aligned_cols=59 Identities=14% Similarity=0.062 Sum_probs=42.0
Q ss_pred CCEEEEECCCC-HHH--HHHHHHhhhcCcEEeecCCCCCHHHHHHHHHhcCCcEEEEcccch
Q 048729 65 GHVVSVVAPNV-PSM--YELQFGVPMSGAILNNINTRLDAHTLSVLLQHSESKLVFVDHLHT 123 (330)
Q Consensus 65 gd~V~~~~~~~-~~~--~~~~la~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 123 (330)
...|+-+.+.. ++. ......+-..|.-++-+....+++++...+.+.+|+++..+....
T Consensus 4 ~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~ 65 (137)
T PRK02261 4 KTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG 65 (137)
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc
Confidence 33444444433 443 333344557899999999999999999999999999998875433
No 376
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=20.51 E-value=96 Score=15.61 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=13.7
Q ss_pred CCCCCCCCcccHHHHHHH
Q 048729 308 ELPKTSTGKIQKYLLREF 325 (330)
Q Consensus 308 ~lP~t~~GKv~r~~l~~~ 325 (330)
.+-.+.+|+++..++.+.
T Consensus 7 ~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 7 QFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHTTTSSSEEEHHHHHHH
T ss_pred HHcCCCCCcCCHHHHHHH
Confidence 345678899999888764
No 377
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=20.25 E-value=3.5e+02 Score=24.04 Aligned_cols=49 Identities=10% Similarity=0.081 Sum_probs=38.5
Q ss_pred EEEecCceEEEEecCCCeEE-eCCeecCHHHHHHHHhcCcCcceEEEEeecC
Q 048729 208 GVMHADGYVEIKDRSKDVII-SGGENICSAEVESVLYSITAVNEAAVVARPD 258 (330)
Q Consensus 208 ~~~~~~G~l~~~GR~dd~ik-~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 258 (330)
+++.+.|.+|+.|-.|.-|| +.| |+-.-|+.+-++|.+-.-|.++...+
T Consensus 267 V~Ys~t~~lYvTaSkDG~IklwDG--VS~rCv~t~~~AH~gsevcSa~Ftkn 316 (430)
T KOG0640|consen 267 VRYSSTGSLYVTASKDGAIKLWDG--VSNRCVRTIGNAHGGSEVCSAVFTKN 316 (430)
T ss_pred EEecCCccEEEEeccCCcEEeecc--ccHHHHHHHHhhcCCceeeeEEEccC
Confidence 56778899999999999999 788 56677888888898866665555444
No 378
>PRK07050 cystathionine beta-lyase; Provisional
Probab=20.17 E-value=5.8e+02 Score=23.37 Aligned_cols=18 Identities=17% Similarity=0.071 Sum_probs=13.1
Q ss_pred HHHHHHHhcCcCcceEEE
Q 048729 236 AEVESVLYSITAVNEAAV 253 (330)
Q Consensus 236 ~~iE~~l~~~~~v~~~~v 253 (330)
..|.+.|.++|.|..+.-
T Consensus 273 ~~la~~L~~~p~v~~v~~ 290 (394)
T PRK07050 273 LEVAEWLKARPEIATVLH 290 (394)
T ss_pred HHHHHHHHhCCCccEEEC
Confidence 346777888998887663
No 379
>PRK15029 arginine decarboxylase; Provisional
Probab=20.07 E-value=3.9e+02 Score=27.12 Aligned_cols=60 Identities=22% Similarity=0.162 Sum_probs=42.2
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHhhhcCcEEeecCCCC---------C-----HHHHHHHHHhcC-Cc---------EEE
Q 048729 62 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL---------D-----AHTLSVLLQHSE-SK---------LVF 117 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~la~~~~G~~~~~l~~~~---------~-----~~~l~~~l~~~~-~~---------~i~ 117 (330)
.++||.|+ +-.|++-.+.. |+..+|+.++-+.|.. + ++.+.+.++... ++ +++
T Consensus 242 ~~~gd~Vl-v~RN~HKSv~~--al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl 318 (755)
T PRK15029 242 MTDNDVVV-VDRNCHKSIEQ--GLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV 318 (755)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE
Confidence 37899665 66777776665 8999999999887543 3 778888886653 23 567
Q ss_pred EcccchH
Q 048729 118 VDHLHTY 124 (330)
Q Consensus 118 ~~~~~~~ 124 (330)
+.|.+..
T Consensus 319 t~PTY~G 325 (755)
T PRK15029 319 TNCTYDG 325 (755)
T ss_pred ECCCCcc
Confidence 7776554
No 380
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=20.03 E-value=2.6e+02 Score=25.66 Aligned_cols=58 Identities=9% Similarity=0.045 Sum_probs=35.0
Q ss_pred CCCCCEEEEECCCCHHHHHHHH--HhhhcCcEEee--cC---CCCCHHHHHHHHHhcCCcEEEEc
Q 048729 62 IQRGHVVSVVAPNVPSMYELQF--GVPMSGAILNN--IN---TRLDAHTLSVLLQHSESKLVFVD 119 (330)
Q Consensus 62 ~~~gd~V~~~~~~~~~~~~~~l--a~~~~G~~~~~--l~---~~~~~~~l~~~l~~~~~~~i~~~ 119 (330)
+++||.|++..+....+..... .....|+.++. ++ ...+.+.+...++..++++++..
T Consensus 108 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~ 172 (416)
T PRK00011 108 LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAG 172 (416)
T ss_pred cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEEC
Confidence 4789998888776543322111 11233444443 33 24678888888877678877764
Done!