Query 048730
Match_columns 195
No_of_seqs 233 out of 1076
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 12:29:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048730hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02392 probable steroid redu 100.0 3.1E-47 6.7E-52 329.4 17.5 167 21-195 1-260 (260)
2 KOG1638 Steroid reductase [Lip 100.0 1.5E-43 3.2E-48 301.1 15.1 160 31-195 7-257 (257)
3 PF02544 Steroid_dh: 3-oxo-5-a 100.0 1.2E-35 2.5E-40 238.1 12.7 115 80-195 34-150 (150)
4 PLN03164 3-oxo-5-alpha-steroid 100.0 1.6E-31 3.4E-36 236.8 13.1 109 86-195 210-323 (323)
5 PLN02560 enoyl-CoA reductase 100.0 1.4E-31 3E-36 237.2 12.7 113 82-194 188-308 (308)
6 KOG1640 Predicted steroid redu 99.9 4.4E-25 9.5E-30 192.2 10.6 109 86-195 193-304 (304)
7 KOG1639 Steroid reductase requ 99.9 4.3E-24 9.2E-29 183.1 6.1 115 79-194 179-297 (297)
8 PF04191 PEMT: Phospholipid me 99.7 6.2E-17 1.3E-21 120.8 11.9 98 86-183 2-106 (106)
9 PF06966 DUF1295: Protein of u 99.7 6E-17 1.3E-21 138.4 9.8 103 86-188 120-233 (235)
10 COG3752 Steroid 5-alpha reduct 99.7 1.7E-16 3.7E-21 136.5 7.8 110 84-194 147-266 (272)
11 COG2020 STE14 Putative protein 99.6 1.7E-15 3.7E-20 125.5 12.1 110 86-195 69-186 (187)
12 PF04140 ICMT: Isoprenylcystei 99.5 5.2E-13 1.1E-17 99.7 11.0 87 91-177 2-94 (94)
13 PF01222 ERG4_ERG24: Ergostero 99.4 2.5E-12 5.5E-17 119.0 9.9 109 87-195 304-432 (432)
14 KOG4650 Predicted steroid redu 99.3 3.4E-11 7.3E-16 104.2 10.0 107 86-194 176-296 (311)
15 KOG2628 Farnesyl cysteine-carb 99.2 8.1E-11 1.8E-15 98.2 8.1 114 81-194 77-200 (201)
16 KOG1435 Sterol reductase/lamin 99.1 7.9E-11 1.7E-15 108.0 5.0 107 89-195 302-428 (428)
17 COG1755 Uncharacterized protei 99.0 3.8E-09 8.3E-14 86.2 10.6 94 86-179 70-169 (172)
18 PLN02797 phosphatidyl-N-dimeth 96.5 0.015 3.3E-07 47.4 8.1 76 87-165 66-146 (164)
19 PF07298 NnrU: NnrU protein; 96.4 0.025 5.5E-07 47.4 8.7 64 125-192 96-163 (191)
20 KOG4142 Phospholipid methyltra 95.8 0.031 6.6E-07 46.4 6.3 75 86-161 97-178 (208)
21 COG4094 Predicted membrane pro 87.9 0.8 1.7E-05 39.1 4.2 73 121-194 99-174 (219)
22 PF11118 DUF2627: Protein of u 44.8 31 0.00067 25.1 3.2 52 57-115 17-69 (77)
23 PF15584 Imm44: Immunity prote 37.7 17 0.00036 27.4 1.0 20 116-135 21-49 (94)
24 PF05653 Mg_trans_NIPA: Magnes 30.9 2.4E+02 0.0053 24.9 7.5 48 133-180 46-103 (300)
25 PF13789 DUF4181: Domain of un 29.7 2.1E+02 0.0046 21.4 6.0 55 119-173 15-81 (110)
26 PF12351 Fig1: Ca2+ regulator 29.4 3.2E+02 0.007 22.4 7.7 97 31-148 71-170 (182)
27 PF11688 DUF3285: Protein of u 25.8 72 0.0016 20.8 2.3 23 29-51 19-41 (45)
28 PF01307 Plant_vir_prot: Plant 23.0 1.4E+02 0.0031 22.7 3.9 12 116-127 38-49 (104)
29 COG0573 PstC ABC-type phosphat 21.4 1.4E+02 0.003 27.1 4.1 29 86-114 281-309 (310)
No 1
>PLN02392 probable steroid reductase DET2
Probab=100.00 E-value=3.1e-47 Score=329.44 Aligned_cols=167 Identities=77% Similarity=1.500 Sum_probs=152.8
Q ss_pred cccCCCCCchHHHHHHHHHHHHHhhhhhhhhhhheeccCCCcccccc---------------------------------
Q 048730 21 MASSSSSSSDQAFFNNCLLTLYLIAPPTFISLRFLQAPYGKHHRSGW--------------------------------- 67 (195)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~a~yg~~~~~~~--------------------------------- 67 (195)
|+|+| +++|+.++++|+++|++||++|+|++|||||+.+++|
T Consensus 1 ~~~~~-----~~~~~~~l~~~~~~~~~~~~~l~f~~apYGk~~~~~~g~~vp~rlaW~lmE~P~~~~~~~~~~~~~~~~~ 75 (260)
T PLN02392 1 MALSD-----QSLFHYSLLALYLIGPPTFISLKFLQAPYGKHNRLGWGPTVSPPLAWFLMESPTLWLTLLLFPLGQHFTN 75 (260)
T ss_pred CCcch-----HHHHHHHHHHHHHHHHHHHHHHHhcCcCcCCCCCCCCCcCCCchHHHHHhhccHHHHHHHHHhcCccccc
Confidence 67888 9999999999999999999999999999999998766
Q ss_pred -----------------------------------------------------------cccccCCCCCCCCchhHH-HH
Q 048730 68 -----------------------------------------------------------VSHYKDYDGESDGRLFWW-RF 87 (195)
Q Consensus 68 -----------------------------------------------------------~~~~~~~~~~~~~~w~~~-~~ 87 (195)
++|+.+ .|+++|..+ ++
T Consensus 76 ~~~~vl~~lf~~HY~~Ra~i~Pl~~~~~~~~~~~~p~p~~i~~~a~~F~~~Ng~lq~~wl~~~~~---~y~~~~~~~~~~ 152 (260)
T PLN02392 76 PKALLLMSPYLLHYFHRTCIYPLRLYRSTSQQNTKGFPVSMALLAFGFNLLNAYLQARWVSHYKD---DYEDGGWFWWRF 152 (260)
T ss_pred cHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhccCC---cCCCcccccHHH
Confidence 112211 245565544 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 048730 88 LIGLVIFFCGMWVNIWSDKVLVGLKKQGGGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLYTCANLVPR 167 (195)
Q Consensus 88 ~iGl~Lf~iG~~~n~~sd~~L~~LR~~g~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~~~~~l~~r 167 (195)
++|+++|++|+.+|+++|.+|++|||++++|+||+||+|+||+||||+||+++|+|++++++|+.+++|++++++||.+|
T Consensus 153 ~iG~~lF~~g~~~N~~sh~~L~~LRk~g~~Y~iP~GGlF~~VscPnYf~EileW~gfal~t~s~~~~~F~~~~~~nl~~r 232 (260)
T PLN02392 153 FGGLVVFLWGMRINVWSDRVLVGLKREGGGYKVPRGGWFELVSCPNYFGEIVEWLGWAVMTWSWAGFGFFLYTCSNLVPR 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCeeECCCCCCcCeEcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCcccccCcceeccccC
Q 048730 168 ALAHHKWYLEKFGEDYPKHRKAVIPFLY 195 (195)
Q Consensus 168 A~~~~~wY~~kFGeeYp~~Rk~lIPfI~ 195 (195)
|.++|+||+||||||||++||++|||||
T Consensus 233 A~~~hkwY~~kFg~~ypk~RkaiIPfi~ 260 (260)
T PLN02392 233 ACANHKWYLEKFGEDYPKGRKAVIPFLY 260 (260)
T ss_pred HHHHHHHHHHHccccccCCCeEecCccC
Confidence 9999999999999999999999999996
No 2
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=301.08 Aligned_cols=160 Identities=51% Similarity=0.992 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhee-ccCCCccc------------ccc------------------------------
Q 048730 31 QAFFNNCLLTLYLIAPPTFISLRFLQ-APYGKHHR------------SGW------------------------------ 67 (195)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~f~~-a~yg~~~~------------~~~------------------------------ 67 (195)
++.+-..++.|...|.++++++...+ ++||+++. .+|
T Consensus 7 ~~~il~~~~~~~~~~~~~~~~l~~~~ks~yGr~s~s~~~~~~~ip~~~aw~iqe~Paf~~pl~~~~~~~~~~~~~~~~L~ 86 (257)
T KOG1638|consen 7 REIILAGSWTLIGAGALAFLALKRQRKSGYGRHSSSLNPTKTRIPPRIAWFIQELPAFAIPLYSLFRGPSSDLPPGLLLL 86 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccCCceecCCCcchhcCCCchhHHHHhcCcHHHhhHHHhcCCCcccccccHHHH
Confidence 67777888899999999999999966 99999942 112
Q ss_pred ----------------------------------------------cccccCCCCCCCCchhHH-HHHHHHHHHHHHHHH
Q 048730 68 ----------------------------------------------VSHYKDYDGESDGRLFWW-RFLIGLVIFFCGMWV 100 (195)
Q Consensus 68 ----------------------------------------------~~~~~~~~~~~~~~w~~~-~~~iGl~Lf~iG~~~ 100 (195)
++|++++ ++.|.++ ++++|+.+|+.|+.+
T Consensus 87 ~~flvHYf~R~liypf~~~~~~~~p~~i~a~a~~F~~~NG~lqg~y~~~~~~~----~d~~~~~~r~liG~~lfv~Gm~i 162 (257)
T KOG1638|consen 87 SAFLVHYFHRALIYPFLIRSSNPSPAIIVALAIAFCTLNGTLQGLYLSHYQLY----EDPWVTDIRFLIGVVLFVTGMLI 162 (257)
T ss_pred HHHHHHHHHHHHhheeeecCCCCccHHHHHHHHHHHHhhHHHHHHHHHhcccc----cCCCchhHHHHHHHHHHHHHhhh
Confidence 4566665 5677777 999999999999999
Q ss_pred HHHHHHHHhhcccCC-CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 048730 101 NIWSDKVLVGLKKQG-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLYTCANLVPRALAHHKWYLEKF 179 (195)
Q Consensus 101 n~~sd~~L~~LR~~g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~~~~~l~~rA~~~~~wY~~kF 179 (195)
|+++|.+|++|||++ ++|+||+||+|+||+||||+|||++|+|+|+++||++++.|++++++|+.+||.++|+||+|||
T Consensus 163 N~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~l~pRA~ahH~WY~~kF 242 (257)
T KOG1638|consen 163 NIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICNLGPRAYAHHKWYLKKF 242 (257)
T ss_pred hhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 999999999999998 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCcceeccccC
Q 048730 180 GEDYPKHRKAVIPFLY 195 (195)
Q Consensus 180 GeeYp~~Rk~lIPfI~ 195 (195)
||||++||++||||+
T Consensus 243 -e~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 243 -EDYPKNRKALIPFVF 257 (257)
T ss_pred -ccCCccceeeccccC
Confidence 899999999999996
No 3
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1.3.99.5 from EC catalyse the conversion of 3-oxo-5-alpha-steroid + acceptor to 3-oxo-delta(4)-steroid + reduced acceptor. The steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during foetal development []. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related steroid reductase enzyme, DET2, is found in plants such as Arabidopsis. Mutations in this enzyme cause defects in light-regulated development []. This domain is present in both type 1 and type 2 forms.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006629 lipid metabolic process, 0005737 cytoplasm, 0016021 integral to membrane
Probab=100.00 E-value=1.2e-35 Score=238.12 Aligned_cols=115 Identities=49% Similarity=0.977 Sum_probs=109.0
Q ss_pred CchhHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHH
Q 048730 80 GRLFWW-RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFF 157 (195)
Q Consensus 80 ~~w~~~-~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~ 157 (195)
.+|... +.++|+++|++|+..|+.+|.+|+++|+++ ++|++|+||+|++|+||||++|+++|+|++++++|+++++++
T Consensus 34 ~~~~~~~~~~~g~~lf~~g~~~n~~~h~~L~~lr~~~~~~y~iP~gg~F~~vscP~Y~~Eil~w~~f~l~~~~~~~~~f~ 113 (150)
T PF02544_consen 34 YTWLPSPRFIIGLALFLIGSIGNFYSHLILANLRKPGSKKYKIPKGGLFEYVSCPHYFFEILIWIGFALLTGSWPSYAFA 113 (150)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCceeCCCCCCcceeeehhhHHHHHHHHHHHHHHhhhhhHHHH
Confidence 345443 889999999999999999999999999988 679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCcccccCcceeccccC
Q 048730 158 LYTCANLVPRALAHHKWYLEKFGEDYPKHRKAVIPFLY 195 (195)
Q Consensus 158 l~~~~~l~~rA~~~~~wY~~kFGeeYp~~Rk~lIPfI~ 195 (195)
+++++||.+||..+|+||++|| +|||++||++|||||
T Consensus 114 ~~~~~~l~~~A~~~h~wY~~~F-~~yp~~R~~lIPfi~ 150 (150)
T PF02544_consen 114 LFVVVNLSPRAVQTHRWYKKKF-KEYPKNRKALIPFIF 150 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-ccccCCCeEecCccC
Confidence 9999999999999999999999 899999999999997
No 4
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Probab=99.97 E-value=1.6e-31 Score=236.75 Aligned_cols=109 Identities=38% Similarity=0.735 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc--CC-CCcccccCCccccccCchhHHHHHHHHHHHHHhh--hHHHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKK--QG-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTW--SWVGLGFFLYT 160 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~--~g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~--S~~~~~f~l~~ 160 (195)
..++|+++|++|+..|+.+|.+|++||+ ++ ++|+||+||+|++|+||||++||++|+|++++++ +...+++++++
T Consensus 210 ~q~iGl~lFlig~~~n~~~H~iLa~LR~~k~~~~~Y~IP~GglF~~VSCPHYf~EIliw~gfal~t~~~~~~~~l~~~~v 289 (323)
T PLN03164 210 FQWIGAAIFLWGWIHQYRCHAILGSLREHKKQADEYVIPYGDWFEMVSCPHYLAEIVIYAGLLIASGGTDLTIWLLFGFV 289 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCCceEECCCCCCcCeEcCCcHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 3589999999999999999999999994 33 5799999999999999999999999999999997 46667888999
Q ss_pred HHHHHHHHHHHHHHHHHhhCcccccCcceeccccC
Q 048730 161 CANLVPRALAHHKWYLEKFGEDYPKHRKAVIPFLY 195 (195)
Q Consensus 161 ~~~l~~rA~~~~~wY~~kFGeeYp~~Rk~lIPfI~ 195 (195)
++||..||.++|+||+||| +|||++||++|||||
T Consensus 290 ~~nL~~~A~~tHkWY~kkF-~dYPk~RkAIIPfI~ 323 (323)
T PLN03164 290 VANLTFAAAETHRWYLQKF-ENYPRNRYAIIPFVY 323 (323)
T ss_pred HHHHHHHHHHHHHHHHHhc-cccccCceEecCccC
Confidence 9999999999999999999 699999999999996
No 5
>PLN02560 enoyl-CoA reductase
Probab=99.97 E-value=1.4e-31 Score=237.16 Aligned_cols=113 Identities=31% Similarity=0.572 Sum_probs=104.1
Q ss_pred hhHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccC-C-CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHH
Q 048730 82 LFWW-RFLIGLVIFFCGMWVNIWSDKVLVGLKKQ-G-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFL 158 (195)
Q Consensus 82 w~~~-~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~-g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l 158 (195)
|... ++++|+++|++|+..|+++|.+|++||++ | ++|+||+||+|++|+||||++|+++|+|++++++|+++++|++
T Consensus 188 ~~~~~~~~~g~~lf~~~~~~N~~~h~~L~~LR~~~g~~~y~IP~g~lF~~VscPnY~~Ei~~W~gf~~~t~~~~~~~F~~ 267 (308)
T PLN02560 188 PVSETQMKVGFGFGLVCQLANFYCHIILRNLRKPDGKGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIATQTVAGYLFLA 267 (308)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCeeCCCCCCcCeecCCcHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3334 78999999999999999999999999998 7 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCc-----ccccCcceecccc
Q 048730 159 YTCANLVPRALAHHKWYLEKFGE-----DYPKHRKAVIPFL 194 (195)
Q Consensus 159 ~~~~~l~~rA~~~~~wY~~kFGe-----eYp~~Rk~lIPfI 194 (195)
++++||.+||..+|+||++||++ +||++|++++||+
T Consensus 268 ~~~~~m~~wA~~kh~~Y~k~F~d~~~~~~yp~~~~~~pp~~ 308 (308)
T PLN02560 268 VAAAIMTNWALAKHRRLKKLFDGKDGRPKYPRRWVILPPFL 308 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccccCCCceEeCCCcC
Confidence 99999999999999999999976 5998666666764
No 6
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism]
Probab=99.92 E-value=4.4e-25 Score=192.19 Aligned_cols=109 Identities=44% Similarity=0.779 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC---CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG---GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLYTCA 162 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g---~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~~~~ 162 (195)
.+++|+++|++|.+.|..||.+|+++|+.. +.|.+|+||+|++|+||||++|+++++|++....++..++.+.|+++
T Consensus 193 ~q~~g~~iF~i~s~~Qy~~h~iL~nlrk~~~~~~~~~ip~g~~F~~Vs~Ph~L~Ei~iY~~ia~~~~~~~iwLv~~~V~~ 272 (304)
T KOG1640|consen 193 LQWLGLGIFAIGSIHQYASHEILGNLRKYPRQAKAYLIPKGGWFKLVSCPHYLAEIIIYVGIALGAPDLTIWLVFGWVAA 272 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhheecCCCCEeeecCChHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 789999999999999999999999999987 56999999999999999999999999998888888888888899999
Q ss_pred HHHHHHHHHHHHHHHhhCcccccCcceeccccC
Q 048730 163 NLVPRALAHHKWYLEKFGEDYPKHRKAVIPFLY 195 (195)
Q Consensus 163 ~l~~rA~~~~~wY~~kFGeeYp~~Rk~lIPfI~ 195 (195)
|++..|.++|+||++|| |+||++|+++|||++
T Consensus 273 N~t~aA~~Th~wY~~kF-~~yp~~R~AiiPfl~ 304 (304)
T KOG1640|consen 273 NLTYAALETHRWYLKKF-ENYPKNRHAIIPFLY 304 (304)
T ss_pred HHHHHHHHHHHHHHHhh-ccCcccccccccccC
Confidence 99999999999999999 899999999999986
No 7
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism]
Probab=99.89 E-value=4.3e-24 Score=183.12 Aligned_cols=115 Identities=33% Similarity=0.537 Sum_probs=104.3
Q ss_pred CCchhHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCcccc--cCCccccccCchhHHHHHHHHHHHHHhhhHHHH
Q 048730 79 DGRLFWW-RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-GGYKVP--RGGWFELVSCPNYFGEILEWFGWAVMTWSWVGL 154 (195)
Q Consensus 79 ~~~w~~~-~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-~~~~iP--~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~ 154 (195)
++.-... +..+|++.|+++.+.|+.+|..|++||..+ +.+++| +|-+|++|+||||+.|+..|+||+++++++++.
T Consensus 179 t~~~~~~~~~~~~l~~fv~~el~NF~~HI~LR~lrp~g~k~r~ip~~~g~lFnlvscpNYt~Ev~sWi~F~i~tq~l~a~ 258 (297)
T KOG1639|consen 179 TPPKLGKLQVKLGLGGFVLCELGNFSCHILLRNLRPAGSKKRRIPLPDGFLFNLVSCPNYTYEVGSWIGFAIMTQCLAAY 258 (297)
T ss_pred CCcchhhhhhhhhhHHHhhhhhcceeeEeehhhccCCcCccceeecCCccEEEEEecCCcceehHHHHHHHHHHHHHHHH
Confidence 3343434 789999999999999999999999999998 455555 566899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcccccCcceecccc
Q 048730 155 GFFLYTCANLVPRALAHHKWYLEKFGEDYPKHRKAVIPFL 194 (195)
Q Consensus 155 ~f~l~~~~~l~~rA~~~~~wY~~kFGeeYp~~Rk~lIPfI 194 (195)
+|+....++|..||..+|+.|+|+| .|||++|+.+|||+
T Consensus 259 lFl~vg~aqMtiWA~~Kh~~ylKeF-p~Ypr~r~~iiPFv 297 (297)
T KOG1639|consen 259 LFLTVGAAQMTIWAKGKHRRYLKEF-PDYPRRRKIIIPFV 297 (297)
T ss_pred HHHHHHHHHHHHHHHhhhHhHhhhc-ccCCccccccCCCC
Confidence 9999999999999999999999999 59999999999996
No 8
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=99.73 E-value=6.2e-17 Score=120.81 Aligned_cols=98 Identities=27% Similarity=0.483 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC------CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG------GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLY 159 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g------~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~ 159 (195)
+.++|++++++|..+..++...+++-++.. ++.+++++|+|++||||+|+|.++.++|.+++++|+..++..+.
T Consensus 2 ~~~~G~~l~~~g~~l~~~~~~~l~~~~~~~~~~~~~~~~~Lvt~G~Y~~vRhPmY~g~~l~~~G~~l~~~s~~~l~~~~~ 81 (106)
T PF04191_consen 2 RFVLGLLLILAGIALAIWAFKALGRFGTYYGDFFGREPQRLVTTGPYRYVRHPMYLGFLLILLGIALMLGSWLGLLLAVL 81 (106)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCeecCCcccccCCcccccCCccCcCChHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 467999999999999999999998877642 34679999999999999999999999999999999887665544
Q ss_pred H-HHHHHHHHHHHHHHHHHhhCccc
Q 048730 160 T-CANLVPRALAHHKWYLEKFGEDY 183 (195)
Q Consensus 160 ~-~~~l~~rA~~~~~wY~~kFGeeY 183 (195)
. +.........||++++++|||||
T Consensus 82 ~~~~~~~~~~~~EE~~L~~~fG~~Y 106 (106)
T PF04191_consen 82 AFLLYYIFIIRFEERFLERRFGEEY 106 (106)
T ss_pred HHHHHHHHHHHhHHHHHHHHhCcCC
Confidence 4 44444445589999999999998
No 9
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=99.70 E-value=6e-17 Score=138.40 Aligned_cols=103 Identities=24% Similarity=0.358 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCcccccCCccccccCchhHHHHHHHHHHHHHhhhH------HHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSW------VGLGFFL 158 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~------~~~~f~l 158 (195)
..++|++++++|+.++..+|.|+.++|+++ ++.++.++|+|+|+|||||+||++.|+|+++++.+. .+++-.+
T Consensus 120 ~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~~~~~~~~~~~~~pl 199 (235)
T PF06966_consen 120 LDILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAISSGSGWLWWAIIGPL 199 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 678999999999999999999999999877 567799999999999999999999999999998542 1122222
Q ss_pred HHHH-HHHHH-HHHHHHHHHHhhC--cccccCcc
Q 048730 159 YTCA-NLVPR-ALAHHKWYLEKFG--EDYPKHRK 188 (195)
Q Consensus 159 ~~~~-~l~~r-A~~~~~wY~~kFG--eeYp~~Rk 188 (195)
++.. .+... +...|+...+|+| ++|.++.+
T Consensus 200 ~~~~~l~~~sgip~~E~~~~~kyg~~~~Y~~Y~~ 233 (235)
T PF06966_consen 200 FMTLLLLFVSGIPLLEKRMAKKYGDRPAYQEYQR 233 (235)
T ss_pred HHHHHHHHHcCchHHHHHHHHhcCCCHhHHHHHh
Confidence 2222 22222 4456777788887 66665443
No 10
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only]
Probab=99.66 E-value=1.7e-16 Score=136.54 Aligned_cols=110 Identities=26% Similarity=0.397 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHH--HH---HHH
Q 048730 84 WWRFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWV--GL---GFF 157 (195)
Q Consensus 84 ~~~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~--~~---~f~ 157 (195)
.+..++|++++++|..++..+|.||-.+|+++ +++++.+.|+||++||||||||.+.|+|+.+++.|-. .+ .-+
T Consensus 147 ~~~d~~g~~iwivg~~fE~lgD~QL~~Fk~~P~nkgkll~~GLWr~tRHPNYFgE~l~Wwg~~Lia~~~~~~~W~~~sPl 226 (272)
T COG3752 147 GWWDVIGLAIWIVGIVFEALGDAQLWVFKKDPRNKGKLLDTGLWRWTRHPNYFGEALVWWGFYLIAISEWLLLWAVASPL 226 (272)
T ss_pred cHHHHHHHHHHHHHHHHHHhhHHHHHHHHhChhhccccccccceecccCcchHHHHHHHHHHHHHHHhhhhHhhhcccHH
Confidence 33577999999999999999999999999988 6799999999999999999999999999999875311 11 111
Q ss_pred HHH--HHHHHHHHHHHHHHHH--HhhCcccccCcceecccc
Q 048730 158 LYT--CANLVPRALAHHKWYL--EKFGEDYPKHRKAVIPFL 194 (195)
Q Consensus 158 l~~--~~~l~~rA~~~~~wY~--~kFGeeYp~~Rk~lIPfI 194 (195)
+++ +......-..||+.|+ ++| +||.+++.++.|++
T Consensus 227 lmt~LL~~vSGvp~l~ekm~k~r~~f-r~Yq~rt~~F~P~~ 266 (272)
T COG3752 227 LMTWLLVHVSGVPPLEEKMLKSRPGF-REYQRRTNAFFPRP 266 (272)
T ss_pred HHHHHHHHhcCCChHHHHHhcccHhH-HHHHHHhcccCCCC
Confidence 112 1111111124666664 556 78999999999986
No 11
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.7e-15 Score=125.50 Aligned_cols=110 Identities=24% Similarity=0.353 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC----CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG----GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLYTC 161 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g----~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~~~ 161 (195)
...+|+.++.+|..+-.+++.++.+-.+.. ++|++.++|+|++||||.|+|.++..+|..+...|+.+++.++..+
T Consensus 69 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LVttG~Y~~VRHP~Y~~~~l~~~g~~~~~~~~~~l~~~~~~~ 148 (187)
T COG2020 69 IVGLGLLLVGLGLALRLWAMRTLGRSWTVSVKARKGHELVTTGPYSIVRHPIYLGLLLFALGTGLLLGSLWALLIFVVLV 148 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCeeEecCCcceecCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 678999999999999999999888754432 5799999999999999999999999999999999988887776666
Q ss_pred HHH-HHHHHHHHHHHHHhhCccc---ccCcceeccccC
Q 048730 162 ANL-VPRALAHHKWYLEKFGEDY---PKHRKAVIPFLY 195 (195)
Q Consensus 162 ~~l-~~rA~~~~~wY~~kFGeeY---p~~Rk~lIPfI~ 195 (195)
..+ ..++..||+.++++||+|| .++.+++||.+.
T Consensus 149 ~~~~~~~i~~EEr~L~~~fg~~Y~~Y~~rV~r~iP~~~ 186 (187)
T COG2020 149 ALLFLFRIREEERYLRAEFGDEYREYRKRVPRLIPPLV 186 (187)
T ss_pred HHHHHHHhhHHHHHHHHHhhHHHHHHHHhCCccCCCCC
Confidence 556 6799999999999999755 567788999763
No 12
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2.1.1.100 from EC) carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif. In Saccharomyces cerevisiae (Baker's yeast) this methylation is carried out by Ste14p, an integral endoplasmic reticulum membrane protein. Ste14p is the founding member of the isoprenylcysteine carboxyl methyltransferase (ICMT) family, whose members share significant sequence homology [].; GO: 0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity, 0006481 C-terminal protein methylation, 0016021 integral to membrane; PDB: 4A2N_B.
Probab=99.48 E-value=5.2e-13 Score=99.68 Aligned_cols=87 Identities=22% Similarity=0.342 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCC----CCcccccCCccccccCchhHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHH
Q 048730 91 LVIFFCGMWVNIWSDKVLVGLKKQG----GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSW--VGLGFFLYTCANL 164 (195)
Q Consensus 91 l~Lf~iG~~~n~~sd~~L~~LR~~g----~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~--~~~~f~l~~~~~l 164 (195)
++++++|..+..++...|++..+.. ++|++.|+|+|+++|||||+|.++..+|...+..|. .++++.+.....+
T Consensus 2 l~~~i~g~~lr~~a~~~LG~~ft~~v~~~~~h~lVt~GpY~~vRHP~Y~g~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l 81 (94)
T PF04140_consen 2 LGLFIAGQLLRYWAIRTLGRYFTHRVIIQPGHKLVTSGPYRYVRHPSYLGNIIWELGGQLLLFNAWLTALILFALVAWLL 81 (94)
T ss_dssp ---HHHHHHHHHHHHHHHGGG--SS--EETT-----SSTTTTBSSHHHHH-HHHHHHHHHHHHT-HHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHccccCcEEEEecCCCEEecccccccccCchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4568899999999999999988764 789999999999999999999888878877776654 4444444445555
Q ss_pred HHHHHHHHHHHHH
Q 048730 165 VPRALAHHKWYLE 177 (195)
Q Consensus 165 ~~rA~~~~~wY~~ 177 (195)
..|++.||+.+.|
T Consensus 82 ~~RI~~EE~~L~~ 94 (94)
T PF04140_consen 82 FVRIREEERALIE 94 (94)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC
Confidence 5899999987754
No 13
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis. They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane
Probab=99.37 E-value=2.5e-12 Score=118.95 Aligned_cols=109 Identities=22% Similarity=0.389 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCC--------------CCcccccCCccccccCchhHHHHHHHHHHHHHhh--h
Q 048730 87 FLIGLVIFFCGMWVNIWSDKVLVGLKKQG--------------GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTW--S 150 (195)
Q Consensus 87 ~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g--------------~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~--S 150 (195)
...-.++.++|..++-.|+.|..++|+++ ++.++-.+|+|.++|||||+||++.-+++++.++ |
T Consensus 304 ~~~i~~l~~~gy~i~r~sn~QK~~FR~~p~~p~~~~~~~~~t~~G~~LL~SGwWg~~Rh~NY~gdil~a~aw~l~~gf~~ 383 (432)
T PF01222_consen 304 AAAILALGLVGYYIFRGSNSQKNRFRRNPKDPKVIHLKYIPTKRGSKLLVSGWWGIARHPNYLGDILMALAWCLPCGFSS 383 (432)
T ss_pred HHHHHHHHHHHHHHHHHhchhHHHhcCCCCCCcccccceeecCCCCeEEEcChhHhhcccchHHHHHHHHHHHHHHhcCc
Confidence 33446677899999999999999999654 2457778999999999999999999999999875 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccc----cCcceeccccC
Q 048730 151 WVGLGFFLYTCANLVPRALAHHKWYLEKFGEDYP----KHRKAVIPFLY 195 (195)
Q Consensus 151 ~~~~~f~l~~~~~l~~rA~~~~~wY~~kFGeeYp----~~Rk~lIPfI~ 195 (195)
+.....+++.+..+..|+.+.|++.++|+|++.. +-+.++||+||
T Consensus 384 ~~pyfy~~~~~~lL~hR~~RD~~rC~~KYG~~W~~Yc~~Vpy~~iP~iy 432 (432)
T PF01222_consen 384 ILPYFYPIFFTILLIHRARRDEERCRKKYGKDWDEYCKRVPYRIIPGIY 432 (432)
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHhhCHHHHHHHHhCCEEEeCCcC
Confidence 6666667778888999999999999999996543 35779999997
No 14
>KOG4650 consensus Predicted steroid reductase [General function prediction only]
Probab=99.26 E-value=3.4e-11 Score=104.20 Aligned_cols=107 Identities=23% Similarity=0.361 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC-----CCcccccCCccccccCchhHHHHHHHHHHHHHhhh------HHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-----GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWS------WVGL 154 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-----~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S------~~~~ 154 (195)
..++|..+++.|..+...+|.|+-++++.. .+..-...|+|||+|||||+||.+.|.|+.+.++. ++.+
T Consensus 176 wD~I~~~m~~~gfvie~~ADqQ~~~f~~~~~~l~~~Gk~~~d~GlwrySRHPNylgEqL~Wwglyvfa~~~~egl~wtvi 255 (311)
T KOG4650|consen 176 WDVIGWTMWVFGFVIEALADQQKLSFKEARYDLENLGKGWCDVGLWRYSRHPNYLGEQLLWWGLYVFAAPVLEGLEWTVI 255 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHhhhcCHHHcCCccccccceeeccCccHHHHHHHHHHHHHHHhhhhccchHHHH
Confidence 588999999999999999999999988432 23337899999999999999999999999998753 2222
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHhhC--cccccCcceecccc
Q 048730 155 GFFLYT-CANLVPRALAHHKWYLEKFG--EDYPKHRKAVIPFL 194 (195)
Q Consensus 155 ~f~l~~-~~~l~~rA~~~~~wY~~kFG--eeYp~~Rk~lIPfI 194 (195)
.-..++ +..+ ..+..|+...||+. ..|.+.+.++||..
T Consensus 256 ~~lv~~~~l~~--~t~lie~~~v~~~~aYR~Yqktts~~ip~~ 296 (311)
T KOG4650|consen 256 AGLVFLTLLLL--FTSLIELLEVEKYPAYRVYQKTTSRFIPRL 296 (311)
T ss_pred HHHHHHHHHHH--HHhhhhhhhhhhhHHHHHHHhccccccccc
Confidence 222222 2222 22223333333332 45677888899853
No 15
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=8.1e-11 Score=98.21 Aligned_cols=114 Identities=24% Similarity=0.305 Sum_probs=79.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cCCCCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHH
Q 048730 81 RLFWWRFLIGLVIFFCGMWVNIWSDKVLVGLK------KQGGGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGL 154 (195)
Q Consensus 81 ~w~~~~~~iGl~Lf~iG~~~n~~sd~~L~~LR------~~g~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~ 154 (195)
+|++.+..+|+.++++|.+..-.+..+..+.- +..++|++++.|+|+|+|||.|.|-++-+.|--++..|+..+
T Consensus 77 ~~l~~~~~~gl~~~~~Ge~~r~~amitag~~f~H~va~~k~~~h~lv~~GvY~y~RHPsY~g~flw~~gtq~~L~npis~ 156 (201)
T KOG2628|consen 77 SWLWSRIGLGLLMLILGEALRKIAMITAGTSFTHYVATKKVSDHKLVTSGVYAYVRHPSYVGFFLWAAGTQTMLCNPISL 156 (201)
T ss_pred eeeeeeccCceeeeehHHHHHHHHHHHHHHHHHHHHhhccccCceeEeccchhheeCchHHHHHHHHHHHHHHHhCHHHH
Confidence 33333333555555555554444433332211 122679999999999999999999999999999998888777
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHhhCcccccCcc---eecccc
Q 048730 155 GFFLYTCA-NLVPRALAHHKWYLEKFGEDYPKHRK---AVIPFL 194 (195)
Q Consensus 155 ~f~l~~~~-~l~~rA~~~~~wY~~kFGeeYp~~Rk---~lIPfI 194 (195)
++.++++. ....|+..||+-+.+-||+||.+++| .=||||
T Consensus 157 v~f~~V~w~ff~~Ri~~EE~~Li~fFg~~Y~eY~kkV~sGiPfi 200 (201)
T KOG2628|consen 157 VAFLLVVWRFFADRIKEEEKYLISFFGSSYVEYAKKVPSGIPFI 200 (201)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHhCCcCCCCC
Confidence 66655554 44579999999999999987755444 448886
No 16
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.10 E-value=7.9e-11 Score=107.97 Aligned_cols=107 Identities=24% Similarity=0.442 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCC--------------CCcccccCCccccccCchhHHHHHHHHHHHHHhh--hHH
Q 048730 89 IGLVIFFCGMWVNIWSDKVLVGLKKQG--------------GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTW--SWV 152 (195)
Q Consensus 89 iGl~Lf~iG~~~n~~sd~~L~~LR~~g--------------~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~--S~~ 152 (195)
.=.++.+.|..+.-.|+.|.-++|++. ++.++-..|+|.++|||||+||++.-++|++.++ |..
T Consensus 302 ~i~~l~l~gyyifr~an~QK~~FRkn~~~~~~~~i~~i~t~~Gs~LL~SGwWG~aRh~nY~gD~i~alawslp~gf~s~l 381 (428)
T KOG1435|consen 302 GILVLLLLGYYIFRGANAQKNEFRKNPGDPKLKNIKTIYTSTGSKLLVSGWWGVARHPNYLGDLIMALAWSLPCGFNSPL 381 (428)
T ss_pred HHHHHHHhheeEeeccchhHHHHhcCCCCCccccccceEeccCCeEEeechhhhhcCcCcHHHHHHHHHHHHhccCCCCc
Confidence 346677889999999999999999873 3577888999999999999999999999999885 666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCcccc----cCcceeccccC
Q 048730 153 GLGFFLYTCANLVPRALAHHKWYLEKFGEDYP----KHRKAVIPFLY 195 (195)
Q Consensus 153 ~~~f~l~~~~~l~~rA~~~~~wY~~kFGeeYp----~~Rk~lIPfI~ 195 (195)
.....++....++.|+.+.|.+.++|+|++.. +-+.++||+||
T Consensus 382 pyfy~iyf~~LLvhR~~RDe~rC~~KYG~~W~~Yc~~VpyriiP~Vy 428 (428)
T KOG1435|consen 382 PYFYPIYFTLLLVHRAARDEHRCRSKYGEDWEEYCRKVPYRILPYVY 428 (428)
T ss_pred chHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHhhCCcccCCCCC
Confidence 66667788888889998877788999995543 46789999986
No 17
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.00 E-value=3.8e-09 Score=86.25 Aligned_cols=94 Identities=24% Similarity=0.304 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC----CCcccccCCccccccCchhHH-HHHHHHHHHHHhhh-HHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG----GGYKVPRGGWFELVSCPNYFG-EILEWFGWAVMTWS-WVGLGFFLY 159 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g----~~~~iP~gGlFryVr~PnYfg-EiL~wlGfal~t~S-~~~~~f~l~ 159 (195)
.-.+|+++++......+++...|++.++.. ++|++.+.|+||+++||||+- -+.|-+|..+++.- .+++++...
T Consensus 70 ~~~~gl~~~l~s~~ll~~vi~~LG~iWttki~ilP~h~~v~sglfk~~kHPNYflnIipEligl~Ll~~A~~Ta~l~~p~ 149 (172)
T COG1755 70 LSIIGLALLLFSQILLYWVIKSLGEIWTTKIMILPNHQIVRSGLFKTMKHPNYFLNIIPELIGLPLLCQAWYTALLFSPI 149 (172)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhheeeEEEeCCceeeccccchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455899999999999999999999999876 789999999999999999999 78899999999864 467777777
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 048730 160 TCANLVPRALAHHKWYLEKF 179 (195)
Q Consensus 160 ~~~~l~~rA~~~~~wY~~kF 179 (195)
-...+..|.+.||+-+.+-+
T Consensus 150 ya~~L~vRIr~EekaL~~~~ 169 (172)
T COG1755 150 YALLLYVRIRQEEKALAELF 169 (172)
T ss_pred HHHHHhhhhhHHHHHHHHhc
Confidence 78888899999999887655
No 18
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase
Probab=96.54 E-value=0.015 Score=47.40 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCC-C----CcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 048730 87 FLIGLVIFFCGMWVNIWSDKVLVGLKKQG-G----GYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFLYTC 161 (195)
Q Consensus 87 ~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-~----~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l~~~ 161 (195)
.+.+.+++.+|..+|+.+-..|+.-++-- + --..+++-+|++.++|+|-|.++..+|.++....- ..++|++
T Consensus 66 pl~~~~L~aiGq~Lv~ss~~~LG~tGTYlGdyFGilm~~VT~FPFnv~~nPmY~GStl~fLg~al~~p~~---~~~lW~l 142 (164)
T PLN02797 66 PLYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKNIPWVTEFPFGVIRDPQYVGSILSLLACLSWVPFQ---YILLWCL 142 (164)
T ss_pred hHHHHHHHHHhhHHHHHHHHHhCCceeeehhhhcccccccccCCCCCCCCcchhhHHHHHHHHHHHhhHH---HHHHHHH
Confidence 45789999999999999999888755421 0 11357999999999999999999999999987332 3445555
Q ss_pred HHHH
Q 048730 162 ANLV 165 (195)
Q Consensus 162 ~~l~ 165 (195)
..+.
T Consensus 143 gYvf 146 (164)
T PLN02797 143 GYVF 146 (164)
T ss_pred HHHH
Confidence 4443
No 19
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins. NnrU is thought to be involved in the reduction of nitric oxide. The exact function of NnrU is unclear. It is thought however that NnrU and perhaps NnrT are required for expression of both nirK and nor [].
Probab=96.36 E-value=0.025 Score=47.35 Aligned_cols=64 Identities=17% Similarity=0.307 Sum_probs=37.2
Q ss_pred ccccccCchhHHHHHHHHHHHHHh-hhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCccccc--Ccceecc
Q 048730 125 WFELVSCPNYFGEILEWFGWAVMT-WSWVGLG-FFLYTCANLVPRALAHHKWYLEKFGEDYPK--HRKAVIP 192 (195)
Q Consensus 125 lFryVr~PnYfgEiL~wlGfal~t-~S~~~~~-f~l~~~~~l~~rA~~~~~wY~~kFGeeYp~--~Rk~lIP 192 (195)
.++.+|||++.|-.+ |..--++. ++...++ |..+....+.... .++|. ++ +|++|++ ++-...|
T Consensus 96 i~r~~RHP~l~g~~l-WA~aHLl~nGd~~~~lLFg~~~~~al~~~~-~~~rr-~~-~g~~~~~~~~~~s~~~ 163 (191)
T PF07298_consen 96 IYRITRHPMLLGVLL-WALAHLLANGDLASLLLFGGFLAWALIGII-LIDRR-RR-FGDAWRAYPRRTSIWP 163 (191)
T ss_pred HHHHhcCchHHHHHH-HHHHHhhhcCcHHHHHHHHHHHHHHHHHHH-HHHHh-hc-cccccccccCCCCCCC
Confidence 999999999999664 65443443 3454433 3334333333333 34444 66 9888763 3445555
No 20
>KOG4142 consensus Phospholipid methyltransferase [Lipid transport and metabolism]
Probab=95.76 E-value=0.031 Score=46.39 Aligned_cols=75 Identities=24% Similarity=0.317 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------CCcccccCCccccccCchhHHHHHHHHHHHHHhhhHHHHHHHH
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQG-------GGYKVPRGGWFELVSCPNYFGEILEWFGWAVMTWSWVGLGFFL 158 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g-------~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t~S~~~~~f~l 158 (195)
..-+|+++|.+|..+-+.+...|+--.+-- .+-+ ++|-+|+..-||+|-|..+.++|+|++-+++++++..+
T Consensus 97 ~~~lg~alfglG~VLVLSSmykLG~~GTyLGDYFGiL~~eR-VtgFPFNv~dNPMY~GSTl~fLg~Al~~gkpaGLllt~ 175 (208)
T KOG4142|consen 97 AYSLGLALFGLGVVLVLSSMYKLGFAGTYLGDYFGILKEER-VTGFPFNVLDNPMYWGSTLNFLGWALMHGKPAGLLLTV 175 (208)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhccchhhhhhhhhhhhhhh-cccccccccCCcccccchHHHHHHHHHcCCcchhHHHH
Confidence 356899999999998887776665433211 2223 68999999999999999999999999999888877654
Q ss_pred HHH
Q 048730 159 YTC 161 (195)
Q Consensus 159 ~~~ 161 (195)
.+.
T Consensus 176 ~V~ 178 (208)
T KOG4142|consen 176 LVA 178 (208)
T ss_pred HHH
Confidence 443
No 21
>COG4094 Predicted membrane protein [Function unknown]
Probab=87.88 E-value=0.8 Score=39.08 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=44.2
Q ss_pred ccCCccccccCchhHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccc--ccCcceecccc
Q 048730 121 PRGGWFELVSCPNYFGEILEWFGWAVMTWS-WVGLGFFLYTCANLVPRALAHHKWYLEKFGEDY--PKHRKAVIPFL 194 (195)
Q Consensus 121 P~gGlFryVr~PnYfgEiL~wlGfal~t~S-~~~~~f~l~~~~~l~~rA~~~~~wY~~kFGeeY--p~~Rk~lIPfI 194 (195)
-.|+.=+..|||.-.|..+--+|=.+..+. .+.++|.-+....+..+...+. +-++++||.+ ++.++..+||.
T Consensus 99 ~~g~Ii~itRHP~l~g~~iWalaHll~nGd~~Svllfggf~l~~~~~~~~~~r-R~r~r~g~a~~~~~~~ts~~pfa 174 (219)
T COG4094 99 YEGRIIRITRHPQLLGVVIWALAHLLANGDTFSVLLFGGFLLWAVVGVWSGDR-RARKRYGEAFVAPVQVTSRIPFA 174 (219)
T ss_pred cCCceEEEecCchhHHHHHHHHHHhhccCceeeHHHHHHHHHHHHHHhhhhhh-hhhcccCcceeeeeccccccchh
Confidence 348888999999999987665565555442 2233333333333333333333 3377777655 56888999973
No 22
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=44.78 E-value=31 Score=25.11 Aligned_cols=52 Identities=27% Similarity=0.373 Sum_probs=34.0
Q ss_pred ccCC-CcccccccccccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 048730 57 APYG-KHHRSGWVSHYKDYDGESDGRLFWWRFLIGLVIFFCGMWVNIWSDKVLVGLKKQG 115 (195)
Q Consensus 57 a~yg-~~~~~~~~~~~~~~~~~~~~~w~~~~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~g 115 (195)
|.|| +..+.....+..+. .++.|.++.+|+++|++|.. +.+-.++-|=||++
T Consensus 17 a~yGiklMRD~~F~~~~~p-----~~~lwlqfl~G~~lf~~G~~--Fi~GfI~~RDRKrn 69 (77)
T PF11118_consen 17 AAYGIKLMRDTVFGILFSP-----FPSLWLQFLAGLLLFAIGVG--FIAGFILHRDRKRN 69 (77)
T ss_pred HHHHHHHHHHHHHHHhcCC-----chhHHHHHHHHHHHHHHHHH--HHHhHhheeecccc
Confidence 6788 44455544433222 23445599999999999876 46667777777765
No 23
>PF15584 Imm44: Immunity protein 44
Probab=37.68 E-value=17 Score=27.44 Aligned_cols=20 Identities=50% Similarity=1.092 Sum_probs=16.0
Q ss_pred CCcccccCCccc---------cccCchhH
Q 048730 116 GGYKVPRGGWFE---------LVSCPNYF 135 (195)
Q Consensus 116 ~~~~iP~gGlFr---------yVr~PnYf 135 (195)
+++++|..|.|+ ++.|||||
T Consensus 21 SG~~iP~~GIwEPv~~~~~K~~~gc~NYf 49 (94)
T PF15584_consen 21 SGQEIPCDGIWEPVDAPKPKLNVGCPNYF 49 (94)
T ss_pred cCCCcccCCeEccccCCCCccccCcchhh
Confidence 578899988885 46799997
No 24
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=30.91 E-value=2.4e+02 Score=24.94 Aligned_cols=48 Identities=29% Similarity=0.441 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHHHhh----hHHHHHH------HHHHHHHHHHHHHHHHHHHHHhhC
Q 048730 133 NYFGEILEWFGWAVMTW----SWVGLGF------FLYTCANLVPRALAHHKWYLEKFG 180 (195)
Q Consensus 133 nYfgEiL~wlGfal~t~----S~~~~~f------~l~~~~~l~~rA~~~~~wY~~kFG 180 (195)
.|+-+-+-|+|+.++.- +..++.+ .......+...+.-.+..++|+++
T Consensus 46 ~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~ 103 (300)
T PF05653_consen 46 SYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLT 103 (300)
T ss_pred HHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccch
Confidence 56666677777766542 2222222 122233344444555556666553
No 25
>PF13789 DUF4181: Domain of unknown function (DUF4181)
Probab=29.66 E-value=2.1e+02 Score=21.44 Aligned_cols=55 Identities=18% Similarity=0.313 Sum_probs=29.0
Q ss_pred ccccCCcc--ccccCchhHHHHHHHHHHHHHh--h--------hHHHHHHHHHHHHHHHHHHHHHHH
Q 048730 119 KVPRGGWF--ELVSCPNYFGEILEWFGWAVMT--W--------SWVGLGFFLYTCANLVPRALAHHK 173 (195)
Q Consensus 119 ~iP~gGlF--ryVr~PnYfgEiL~wlGfal~t--~--------S~~~~~f~l~~~~~l~~rA~~~~~ 173 (195)
.+|+++.+ ++|..=|=.+|+..-+.+.++. . ........++.+.....||..|.+
T Consensus 15 ~i~k~~~~~~~~vn~~h~~~e~~i~i~~ii~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ra~mEWK 81 (110)
T PF13789_consen 15 NIPKKKFFSYKHVNKLHKKGEWIIFIIFIILIFIFLFIFIFRFFYPYILIFLFLIILFCFRAFMEWK 81 (110)
T ss_pred CCCCCcCCCCCchhHHHHHHHHHhhhhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777766 5555555666665555554443 1 122333344445555567755543
No 26
>PF12351 Fig1: Ca2+ regulator and membrane fusion protein Fig1
Probab=29.39 E-value=3.2e+02 Score=22.44 Aligned_cols=97 Identities=12% Similarity=0.222 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhheec--cCCCcccccccccccCCCCCCCCchhHH-HHHHHHHHHHHHHHHHHHHHHH
Q 048730 31 QAFFNNCLLTLYLIAPPTFISLRFLQA--PYGKHHRSGWVSHYKDYDGESDGRLFWW-RFLIGLVIFFCGMWVNIWSDKV 107 (195)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~f~~a--~yg~~~~~~~~~~~~~~~~~~~~~w~~~-~~~iGl~Lf~iG~~~n~~sd~~ 107 (195)
+-.|-..+.+-+++.++.|+.+.+... |=-++..+. ++. ... ...+..+++.+|...|+.+-..
T Consensus 71 ~iv~p~ll~~aiiL~~~~~lll~~~~~~~~~~P~~~~~-v~~------------~~l~l~~~~~~l~~~~a~~qH~a~~A 137 (182)
T PF12351_consen 71 NIVFPYLLMAAIILFLLCFLLLAYFPGSIPVLPFPSRA-VSK------------VALGLSFLSVLLWLVGAMWQHVASVA 137 (182)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHHccCcCCCCcHHH-HHH------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334556676667777888888777653 111111000 000 011 2344566666777777766654
Q ss_pred HhhcccCCCCcccccCCccccccCchhHHHHHHHHHHHHHh
Q 048730 108 LVGLKKQGGGYKVPRGGWFELVSCPNYFGEILEWFGWAVMT 148 (195)
Q Consensus 108 L~~LR~~g~~~~iP~gGlFryVr~PnYfgEiL~wlGfal~t 148 (195)
...+=.+.. +.. ...+=---.|.+.|++|+++.
T Consensus 138 ~~~~~~~~s-~g~-------v~~~~G~~a~~l~W~aF~f~~ 170 (182)
T PF12351_consen 138 SSTMIEDAS-MGI-------VKVKVGKAAMVLGWFAFAFLL 170 (182)
T ss_pred HHHHHHHhc-CCe-------EEeccchhHHhHHHHHHHHHH
Confidence 444333321 111 111222356889998888754
No 27
>PF11688 DUF3285: Protein of unknown function (DUF3285); InterPro: IPR021702 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=25.83 E-value=72 Score=20.82 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHHHHhhhhhhhh
Q 048730 29 SDQAFFNNCLLTLYLIAPPTFIS 51 (195)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~ 51 (195)
++++++++.|.+.-++|+++-++
T Consensus 19 g~~SL~HF~LT~~gll~~lv~la 41 (45)
T PF11688_consen 19 GGTSLFHFGLTAVGLLGFLVGLA 41 (45)
T ss_pred cCcchhHHHHHHHHHHHHHHHHH
Confidence 35889999999999998876654
No 28
>PF01307 Plant_vir_prot: Plant viral movement protein; InterPro: IPR001896 This family of membrane/coat proteins are found in a number of different ssRNA plant virus families that include Potexvirus, Hordeivirus and Carlavirus.
Probab=23.01 E-value=1.4e+02 Score=22.65 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=10.5
Q ss_pred CCcccccCCccc
Q 048730 116 GGYKVPRGGWFE 127 (195)
Q Consensus 116 ~~~~iP~gGlFr 127 (195)
+.|.+|.||-|+
T Consensus 38 niH~LPhGG~Yr 49 (104)
T PF01307_consen 38 NIHSLPHGGRYR 49 (104)
T ss_pred CCCCCCCCCccc
Confidence 459999999997
No 29
>COG0573 PstC ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=21.44 E-value=1.4e+02 Score=27.07 Aligned_cols=29 Identities=24% Similarity=0.511 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 048730 86 RFLIGLVIFFCGMWVNIWSDKVLVGLKKQ 114 (195)
Q Consensus 86 ~~~iGl~Lf~iG~~~n~~sd~~L~~LR~~ 114 (195)
.+.+|++||++.+.+|..+..+.+|.|++
T Consensus 281 L~~~glvLfvitl~~n~~a~~i~~r~~~~ 309 (310)
T COG0573 281 LFALGLVLFVITLLLNILARYIVRRRRRK 309 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 78899999999999999999999987764
Done!