BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048731
(904 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GPJ1|SKEL2_DROME Protein Skeletor, isoforms D/E OS=Drosophila melanogaster
GN=Skeletor PE=1 SV=3
Length = 1503
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 125/293 (42%), Gaps = 45/293 (15%)
Query: 51 LRGV-------VSVIDDCSFRVSQFEML-SGSDVHWWGANATDFDNITSGFIVSDHSLNE 102
LRGV + ++D + V F D +W + G + D + E
Sbjct: 157 LRGVHGVSSDNIVIVDAQTLLVPNFSYDGEAPDAKFWVGRGQR--PTSDGLRIPDENGKE 214
Query: 103 T----YKNATFTVLLLENITWEQIPVLSIWDSFTASDFGHMVLNGSDSGITLSSGLAPSP 158
Y+ T + L E++T I +W DFGH + L GL
Sbjct: 215 NPLRRYERKTIVLTLPEDLTIFDIGHFGVWCEAFTVDFGH---------VRLPEGLN--- 262
Query: 159 TPSSTRVLG-APTMFDNCKVLSKE--FRIRWTLYADENSIEIGLEAATGTQNYMAFGWAN 215
P S ++LG +P NC+VL + F +RW + + SI + L A +YM+FG +
Sbjct: 263 VPPSLKMLGISPQSKLNCEVLYDDLAFEVRWAVAGE--SIVVQLVAKLEPNHYMSFGIS- 319
Query: 216 PNATSGFMLGADVAMTGF-KQEGLPFVDDFYITKYSECVNKDGSYSGVCPDA-IYEGSDS 273
PN M+GAD + Q G F D+++ ++C G CPD I E +
Sbjct: 320 PNKNISQMIGADAVVAWVDPQTGNGFATDYFLEGKAQCSGG----RGACPDTKISEKT-- 373
Query: 274 GGLVNNTRLVYGHRRDGVSFIRYKRPLVSSDKKYDFSVNYTENMQVVWALGLL 326
N+ RL+ +G S + Y+R L ++D + D ++ T VVWA+G L
Sbjct: 374 ----NSIRLLNAAMVNGYSIVTYQRSLAATD-RLDLPISITGAESVVWAIGPL 421
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 54/148 (36%), Gaps = 50/148 (33%)
Query: 406 FYINKKEAPVLRVERGVPVKFSIQAGHDV-------ALYITSDILGGNASLRNVTET--- 455
+YIN P + V RG F ++ G++ YI+ D +GG R +
Sbjct: 576 WYINGLLIPEIHVVRGKTYTFVVEGGNNPDIPAKYHPFYISDDPVGGYEHKREEEKKAVR 635
Query: 456 IYAG--------------------GPEAEGVKA--------------------SPMELVW 475
IYAG P+ EG A P + W
Sbjct: 636 IYAGVHRSRSGQVTPTGVGRLCNWTPDVEGPPADDYQSFGAYQRTLTLKCDAGEPGVITW 695
Query: 476 APDRNTPDEVYYQSLYDQKMGWRIQVVD 503
PDRNTPD VYY + +GW+I V D
Sbjct: 696 KPDRNTPDTVYYHCFTHRYLGWKIHVHD 723
>sp|Q9VGY6|SKEL1_DROME Protein Skeletor, isoforms B/C OS=Drosophila melanogaster
GN=Skeletor PE=1 SV=2
Length = 784
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 35/246 (14%)
Query: 90 TSGFIVSDHSLNET----YKNATFTVLLLENITWEQIPVLSIWDSFTASDFGHMVLNGSD 145
+ G + D + E Y+ T + L E++T I +W DFGH
Sbjct: 202 SDGLRIPDENGKENPLRRYERKTIVLTLPEDLTIFDIGHFGVWCEAFTVDFGH------- 254
Query: 146 SGITLSSGLAPSPTPSSTRVLG-APTMFDNCKVLSKE--FRIRWTLYADENSIEIGLEAA 202
+ L GL P S ++LG +P NC+VL + F +RW + + SI + L A
Sbjct: 255 --VRLPEGLN---VPPSLKMLGISPQSKLNCEVLYDDLAFEVRWAVAGE--SIVVQLVAK 307
Query: 203 TGTQNYMAFGWANPNATSGFMLGADVAMTGFK-QEGLPFVDDFYITKYSECVNKDGSYSG 261
+YM+FG +PN M+GAD + Q G F D+++ ++C G
Sbjct: 308 LEPNHYMSFG-ISPNKNISQMIGADAVVAWVDPQTGNGFATDYFLEGKAQCSGG----RG 362
Query: 262 VCPDA-IYEGSDSGGLVNNTRLVYGHRRDGVSFIRYKRPLVSSDKKYDFSVNYTENMQVV 320
CPD I E + N+ RL+ +G S + Y+R L ++D + D ++ T VV
Sbjct: 363 ACPDTKISEKT------NSIRLLNAAMVNGYSIVTYQRSLAATD-RLDLPISITGAESVV 415
Query: 321 WALGLL 326
WA+G L
Sbjct: 416 WAIGPL 421
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 54/148 (36%), Gaps = 50/148 (33%)
Query: 406 FYINKKEAPVLRVERGVPVKFSIQAGHDV-------ALYITSDILGGNASLRNVTET--- 455
+YIN P + V RG F ++ G++ YI+ D +GG R +
Sbjct: 576 WYINGLLIPEIHVVRGKTYTFVVEGGNNPDIPAKYHPFYISDDPVGGYEHKREEEKKAVR 635
Query: 456 IYAG--------------------GPEAEGVKA--------------------SPMELVW 475
IYAG P+ EG A P + W
Sbjct: 636 IYAGVHRSRSGQVTPTGVGRLCNWTPDVEGPPADDYQSFGAYQRTLTLKCDAGEPGVITW 695
Query: 476 APDRNTPDEVYYQSLYDQKMGWRIQVVD 503
PDRNTPD VYY + +GW+I V D
Sbjct: 696 KPDRNTPDTVYYHCFTHRYLGWKIHVHD 723
>sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1 OS=Mus musculus GN=FRRS1 PE=1 SV=1
Length = 592
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 48/357 (13%)
Query: 517 DDQQVTFFWTLSKDKESISFAARGEKKSGYLAIGFGSG--MVNSYAYVGWIDD----IGK 570
+ + F + ++D +S+ G GY++ F M + AY+ +D I
Sbjct: 214 EKEPACVFLSFTRDNQSVMVEMSG-PSDGYVSFAFSHDQWMGDDDAYLCIREDQTVDIQP 272
Query: 571 GHVNTYWIDSMDASGVHPTVENMTYVRCKSENGFITLEFTRPLKPSCNHSHRNSPKCKNI 630
++ MD+ G T+E+M + + +G I F R + P+ KN
Sbjct: 273 SYLTGRSYPVMDSRG---TLEDMAW---RLADGVIQCSFRRNI---------TLPEAKNR 317
Query: 631 IDPTTPLKVIWAMGSSWTDGHLTERNMHFVKSQRPVRVLLLRGSAEAEQDL-----RPVL 685
+ +A G S DG + F SQ+P+ + + + P+L
Sbjct: 318 FVLNESYYIFFAEGPS-HDGRI------FRHSQQPLITYEKYNVTDTPKSVGGSRSSPLL 370
Query: 686 AVHGFMMFLAWGILLPGGILAARYLKHV-------KGDGWYQIHVYLQYSGLAIVLLALL 738
HG +MF+AW + G+L AR+ + V + W+Q+H L + + +A +
Sbjct: 371 KAHGALMFVAWMTTVSIGVLVARFFRSVWSKAFFLREAAWFQVHRMLMVATSLLTCVAFV 430
Query: 739 FAVAELRGF-YVSSLHVKFGITATVLACVQPLNAFVRPKKPANGEEISSKRLIWEYLHFI 797
G+ + + H G T LA +QPL A RP P + +R ++ + H+
Sbjct: 431 LPFVYRGGWSWRAGYHPYLGCTVMTLAVLQPLLATFRP--PLH----DPRRQVFNWTHWS 484
Query: 798 VGRFAIIAGIVALFTGMKHLGERYGSENVHGLIWALIVWFLIVALIVVYLEFREKQR 854
VG A I + A+F GM G S + +VW + +I+ +R ++
Sbjct: 485 VGTAARIIAVAAMFLGMDLPGLNLPSPQKTYAMMGFVVWHIGTEVILEIHAYRLSRK 541
>sp|Q6INU7|FRRS1_XENLA Putative ferric-chelate reductase 1 OS=Xenopus laevis GN=frrs1 PE=2
SV=1
Length = 590
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 40/307 (13%)
Query: 523 FFWTLSKDKESISFAARGEKKSGYL--AIGFGSGMVNSYAYVGWIDDIGKGHVNTYWIDS 580
FF + KD +S+ G + GY+ A+ M + AY+ +D G +N +I
Sbjct: 219 FFLSFRKDGQSVLVEMSGPGQ-GYISFALSHDQWMGDDDAYLCVKEDDGV-QINPAYIRG 276
Query: 581 MDASGVHPTVENMTYVR---CKSENGFITLEFTRPLKPSCNHSHRNSPKCKNIIDPTTPL 637
HP V +M +R + E+G I F R ++ P K D
Sbjct: 277 RS----HPEVSSMDVLRDVAWRLEDGVIQCSFRRNIQ---------IPIPKERFDLGRSY 323
Query: 638 KVIWAMGSSWTDGHLTERNMHFVKSQRPVRVLLLRGSAEAEQDLRP-VLAVHGFMMFLAW 696
+ A G + DG L + + + R + + + P ++ +HG MMF+AW
Sbjct: 324 FIFLADGDA-KDGLLYRHHRQPLMTNR--KYCITDFPEDVGGSRSPLIIKLHGAMMFIAW 380
Query: 697 GILLPGGILAARYLKHVKGDG-------WYQIHVYLQYSGLAIVLLALLFAVAELRGFYV 749
+ G++ AR+ K V W+QIH L + + + ++A + RG++
Sbjct: 381 MTTVSIGVIIARFFKPVWPTSSLFGEKIWFQIHRCLMITTVFLTVVAFVLPFI-YRGYFS 439
Query: 750 --SSLHVKFGITATVLACVQPLNAFVRPKKPANGEEISSKRLIWEYLHFIVGRFAIIAGI 807
+ H G+T +L +QP+ A RP + +R I+ + H+ G A I +
Sbjct: 440 KRAGYHPHLGVTVMILTVLQPVLAVFRPPPQTH------RRGIFNWTHWATGTAARIIAV 493
Query: 808 VALFTGM 814
A+F GM
Sbjct: 494 AAMFLGM 500
>sp|Q6ZNA5|FRRS1_HUMAN Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2
Length = 592
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 524 FWTLSKDKESISFAARGEKKSGYL--AIGFGSGMVNSYAYVGWIDD----IGKGHVNTYW 577
F + ++D +S+ G K GYL A+ M + AY+ +D I H+
Sbjct: 221 FLSFTRDDQSVMVEMSGPSK-GYLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRS 279
Query: 578 IDSMDASGVHPTVENMTYVRCKSENGFITLEFTRPLKPSCNHSHRNSPKCKNIIDPTTPL 637
MD+ T+E+M + + +G + F R + P KN D T
Sbjct: 280 HPVMDSRD---TLEDMAW---RLADGVMQCSFRRNI---------TLPGVKNRFDLNTSY 324
Query: 638 KVIWAMGSSWTDGHLTERNMHFVKSQRPVRVLLLRGSAEAEQDLRP-----VLAVHGFMM 692
+ A G++ DG + + SQ+P+ ++ +++ +L VHG +M
Sbjct: 325 YIFLADGAA-NDGRI------YKHSQQPLITYEKYDVTDSPKNIGGSHSVLLLKVHGALM 377
Query: 693 FLAWGILLPGGILAARYLKHVKGD-------GWYQIHVYLQYSGLAIVLLALLFAVAELR 745
F+AW + G+L AR+ K V W+Q+H L ++ + +A +
Sbjct: 378 FVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRG 437
Query: 746 GFYV-SSLHVKFGITATVLACVQPLNAFVRPKKPANGEEISSKRLIWEYLHFIVGRFAII 804
G+ + H G LA +QPL A RP P + +R ++ + H+ +G A I
Sbjct: 438 GWSRHAGYHPYLGCIVMTLAVLQPLLAVFRP--PLH----DPRRQMFNWTHWSMGTAARI 491
Query: 805 AGIVALFTGM 814
+ A+F GM
Sbjct: 492 IAVAAMFLGM 501
>sp|A4QP81|FRRS1_DANRE Putative ferric-chelate reductase 1 OS=Danio rerio GN=frrs1 PE=2
SV=1
Length = 573
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 46/314 (14%)
Query: 545 GYLAIGFG--SGMVNSYAYVGWIDDIGKGHVNTYWIDSMDASGVHPTVENMTYVRCKSEN 602
GY+AIGF M N Y+ D+ G V + +S + ++ N+T + N
Sbjct: 238 GYVAIGFSDDQQMGNDDVYICGKDNNGNLQVQ-HAFNSGRSRPAILSLGNVTDILTAVTN 296
Query: 603 GFITLEFTRPLKPSCNHSHRNSPKCKNIIDPTTPLKVIWAMGSSWTDGHLTERNMHFVKS 662
G I +C+ RN+ + T ++ A GSS + G++ +V S
Sbjct: 297 GNI----------NCSFISRNTISTASRAATTNEYYLMIAAGSS-SQGNIQFHTNKYVTS 345
Query: 663 QRPVRVLLLRGSA--EAEQDLRPVLAVHGFMMFLAWGILLPGGILAARYLKHV-KGDG-- 717
+V LL S +E++ P++ HG +M ++W G++ ARYLK V KG G
Sbjct: 346 ---TKVNLLNPSVVITSEEEFPPMVKAHGCLMLISWMATGSIGMIIARYLKGVAKGQGCF 402
Query: 718 ----WYQIHVYLQY--SGLAIVLLALLFAVAELRGFYVSSLHVKFGITATVLACVQPLNA 771
W+ HV L + ++F A G + H G +L+ +QP+ A
Sbjct: 403 GKDFWFVAHVSLMTLSIIATAIAFIIVFVSA---GDWAGGAHPVLGCLVMILSLIQPIVA 459
Query: 772 FVRPKKPANGEEISSKRLIWEYLHFIVGRFAI-IAGIVALFTGMKHLGERYGSE----NV 826
R E +R ++ + H FAI + A+FTG+ L E Y S+ V
Sbjct: 460 AFRC------EPQHERRFVFNWAH-SCNAFAIKCLAVAAIFTGLA-LFEEYDSDGWMLKV 511
Query: 827 HG--LIWALIVWFL 838
G L W +++ L
Sbjct: 512 MGGYLAWEALMYIL 525
>sp|Q8MSU3|FRRS1_DROME Putative ferric-chelate reductase 1 homolog OS=Drosophila
melanogaster GN=CG8399 PE=2 SV=1
Length = 647
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 642 AMGSSWTDGHLTERNMHFVKSQRPVRVLLLRGSAEAEQDL----RPVLAVHGFMMFLAWG 697
A GSS + + ++ + S +P+ + AE QDL R ++ +HG M AW
Sbjct: 366 ASGSSLKENSVGYHDIGRLPSAQPINL------AEV-QDLSGSSRLLIQLHGAFMIAAWI 418
Query: 698 ILLPGGILAARYLKHV-------KGDGWYQIHVYLQYSGLAIVLLALLFAVAELRGFYVS 750
GI+ ARY K D W+ H L + ++ + A + EL+ V
Sbjct: 419 GTTSLGIIFARYFKQTWVGSQSCGTDQWFAWHRLLMVTTWSLTVAAYVLIWVELKQ-AVW 477
Query: 751 SLHVKFGITATVLACVQPLNAFVRPKKPANGEEISSKRLIWEYLHFIVGRFAIIAGIVAL 810
H G+ +L +QP+ A RP KR + + H++ G A I GIV +
Sbjct: 478 HAHSIIGLITVILCFIQPIGALFRPGPN------DKKRPYFNWGHWLGGNLAHILGIVTI 531
Query: 811 FTGMK 815
F +K
Sbjct: 532 FFSVK 536
>sp|A2VE04|FRRS1_BOVIN Ferric-chelate reductase 1 OS=Bos taurus GN=FRRS1 PE=2 SV=1
Length = 591
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 130/311 (41%), Gaps = 37/311 (11%)
Query: 517 DDQQVTFFWTLSKDKESISFAARGEKKSGYLAIGFGSG--MVNSYAYVGWIDD----IGK 570
+ ++ + ++D +S+ G K GYL++ F M + AYV ++D I
Sbjct: 214 EKERACVLLSFTRDDQSVMVEMSGPSK-GYLSVAFSHDRWMGDDDAYVCILEDQIVHIQP 272
Query: 571 GHVNTYWIDSMDASGVHPTVENMTYVRCKSENGFITLEFTRPLKPSCNHSHRNSPKCKNI 630
H+ MD +E+M + + +G + F R + P KN
Sbjct: 273 SHLTGRSHPIMDFGD---PLEDMAW---RLVDGVMQCSFRRNI---------TLPGVKNR 317
Query: 631 IDPTTPLKVIWAMGSSWTDGHLTERNMHFVKSQRPVRVLLLRGSAEAEQDLRPVLAVHGF 690
D + A G++ DG + + + + + V + L +L VHG
Sbjct: 318 FDLNASYYIFVADGAA-VDGRIHKHSQQPLITYEKYNVTGDPKNIGGSHSLL-LLKVHGA 375
Query: 691 MMFLAWGILLPGGILAARYLKHV-----KGD-GWYQIHVYLQYSGLAIVLLALLFAVAEL 744
+MF+AW + G+L AR+ K V GD W+Q+H L + A+ +A L
Sbjct: 376 LMFVAWMTTVSVGVLIARFFKPVWSKALFGDAAWFQVHRTLMLTTSALTFIAFLLPFIYR 435
Query: 745 RGF-YVSSLHVKFGITATVLACVQPLNAFVRPKKPANGEEISSKRLIWEYLHFIVGRFAI 803
G+ + + H G VLA +Q L A RP P + +R ++ + H+ +G A
Sbjct: 436 GGWNWHAGYHPYLGFIVMVLAVLQLLLAAFRP--PLH----DPRRQMFNWTHWSMGTAAR 489
Query: 804 IAGIVALFTGM 814
I + A+F GM
Sbjct: 490 IIAVAAMFLGM 500
>sp|Q6NP60|MOX12_DROME MOXD1 homolog 2 OS=Drosophila melanogaster GN=olf413 PE=2 SV=1
Length = 760
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 29/169 (17%)
Query: 171 MFDNCKVLSKEFRIRWTLYADENSIEIGLEAATGTQNYMAFGWANPNATSGFMLGADVAM 230
++D+ L+ +FRI W + + + EI T Y+ FG+ + G + GAD+A+
Sbjct: 108 IWDHAIDLNDDFRILWQIINQDITFEIQAR----TLGYVGFGF----SPDGNLAGADMAI 159
Query: 231 TGFKQEGLPFVDDFYITKYSECVNKDGSYSGVCPDAIYEGSDSGGLVNNTRLVYGHRRDG 290
G+ +G + D ++T+ N D P+ + + S + L+ G+
Sbjct: 160 -GWVDKGQTYFQDRHVTR-----NGD-------PEPVVDPS------QDYMLMLGYENAT 200
Query: 291 VSFIRYKRPLVSSDKKYDFSVNYTENMQVVWALGLLKPPD-TLTPYYLP 338
+ +R++R L + D +D ++ + M++++ PP ++ P LP
Sbjct: 201 HTVLRFRRKLDTCDPSHDIAIT-NDTMRLLYMYHAQDPPHGSVRPGTLP 248
>sp|P27303|EMRA_ECOLI Multidrug resistance protein A OS=Escherichia coli (strain K12)
GN=emrA PE=3 SV=2
Length = 390
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 587 HPTVENM-TYVRCKSENGFITLEFTRPLKPSCNHSHRNSPKCKNIIDPTTPLKVIWAMGS 645
P V+ T VR N ++ LE TR + P + R + + I PTTPL + +
Sbjct: 196 QPAVQQAATEVR----NAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATN 251
Query: 646 SWTDGHLTERNMHFVKSQRPVRV 668
W D + E + ++ +PV +
Sbjct: 252 MWVDANFKETQIANMRIGQPVTI 274
>sp|P0C627|UBX2B_RAT UBX domain-containing protein 2B OS=Rattus norvegicus GN=Ubxn2b
PE=1 SV=1
Length = 331
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 255 KDGSYSGVCPDAIYEGSDSGGLVNNTRLVYGHRRDGVSFIRYKRPLVSSDKKYDFSVNYT 314
K+ G P + E + S G R G SF YKR +Y + N
Sbjct: 90 KEAREHGAVP--LNEATRSSSDDKAKSFTGGGYRLGSSF--YKR------SEYIYGENQL 139
Query: 315 ENMQVV---WALGLLKPPDTLTPYYLPQNHGEPESVTYGHLVLNVSEHVNDCLGPLDAED 371
+++Q++ W+ G L PY P N ESV G + L + V+ LD ED
Sbjct: 140 QDVQILLRLWSNGFSLDDGELRPYSDPTNAQFLESVKRGEIPLELQRLVHGSQVSLDMED 199
Query: 372 KEDQDLI 378
+DQ+ I
Sbjct: 200 HQDQEYI 206
>sp|P40851|AXL1_YEAST Putative protease AXL1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AXL1 PE=1 SV=2
Length = 1208
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 12 LLVLLCFLTLSCSADPVKKCNKTSPYTGREYELSMVQHQLRGVVSVIDDCSFRVSQFEML 71
L+ L+ FL S P+++C+K S + E + +G S+I+ + ++E
Sbjct: 432 LIDLVSFLYQSSEDLPMEECSKLSGILQDDLECLTPPNIFKGFKSLIEIDDPNIEKYEN- 490
Query: 72 SGSDVHWWGANATDFDNITSGFIVSDH 98
+ +++ WW A F N F+ D+
Sbjct: 491 TKANIQWWTGQAIKFQNFLKSFMNHDN 517
>sp|A3DRP0|HEMA_I96A2 Hemagglutinin OS=Influenza A virus (strain A/USA:Memphis/10/1996
H1N1) GN=HA PE=3 SV=1
Length = 566
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 517 DDQQVTFFWTLSKDKESISFAARGEKKSGYLAI----GFGSGMVNSYAYVGWID---DIG 569
+ ++ ++WTL + ++I F A G + + A GFGSG++ S A +G D
Sbjct: 240 QEGRINYYWTLLEPGDTIIFEANGNLIAPWYAFALSRGFGSGIITSNASMGECDAKCQTP 299
Query: 570 KGHVNTYWIDSMDASGVHPTV--ENMTYVR 597
+G +N+ S+ VHP E YVR
Sbjct: 300 QGAINS----SLPFQNVHPVTIGECPKYVR 325
>sp|B4URD6|HEMA_I06A0 Hemagglutinin OS=Influenza A virus (strain
A/Russia:St.Petersburg/8/2006 H1N1) GN=HA PE=3 SV=1
Length = 565
Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 517 DDQQVTFFWTLSKDKESISFAARGE----KKSGYLAIGFGSGMVNSYAYVGWID---DIG 569
+ ++ ++WTL + ++I F A G + + L+ GFGSG++NS A + D
Sbjct: 239 QEGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTP 298
Query: 570 KGHVNTYWIDSMDASGVHPTV--ENMTYVR 597
+G +N+ S+ VHP E YVR
Sbjct: 299 QGAINS----SLPFQNVHPVTIGECPKYVR 324
>sp|Q14CS0|UBX2B_HUMAN UBX domain-containing protein 2B OS=Homo sapiens GN=UBXN2B PE=1
SV=1
Length = 331
Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 255 KDGSYSGVCPDAIYEGSDSGGLVNNTRLVYGHRRDGVSFIRYKRPLVSSDKKYDFSVNYT 314
K+ G P + E + + G + G R G SF + +Y + N
Sbjct: 90 KEAREHGAVP--LNEATRASGDDKSKSFTGGGYRLGSSFCKRS--------EYIYGENQL 139
Query: 315 ENMQVV---WALGLLKPPDTLTPYYLPQNHGEPESVTYGHLVLNVSEHVNDCLGPLDAED 371
+++Q++ W+ G L PY P N ESV G + L + V+ LD ED
Sbjct: 140 QDVQILLKLWSNGFSLDDGELRPYNEPTNAQFLESVKRGEIPLELQRLVHGGQVNLDMED 199
Query: 372 KEDQDLI 378
+DQ+ I
Sbjct: 200 HQDQEYI 206
>sp|Q9A352|GCSH_CAUCR Glycine cleavage system H protein OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=gcvH PE=3 SV=1
Length = 121
Score = 33.9 bits (76), Expect = 5.5, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 373 EDQDLIIADANVPLVVVTGEALHYPNPPNPVKVFYINKKEA-PVLRVERGVPVKFSIQAG 431
+D + +I + +V V +T A V ++ EA V++ G+ V S++A
Sbjct: 5 KDHEWVIVEGDVATVGITAYAAEQLG-----DVVFVETPEAGKVVKQGEGLAVVESVKAA 59
Query: 432 HDVALYITSDILGGNASLRNVTETIYA----GGPEAEGVKASPMELVWAPDRN 480
DV ++ +++ GN L ET+ A GG A+ A+P EL DR+
Sbjct: 60 SDVYAPVSGEVIEGNGELAGAPETVNALPESGGWFAKIKLANPAELDALMDRD 112
>sp|B8H4V5|GCSH_CAUCN Glycine cleavage system H protein OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=gcvH PE=3 SV=1
Length = 121
Score = 33.9 bits (76), Expect = 5.5, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 373 EDQDLIIADANVPLVVVTGEALHYPNPPNPVKVFYINKKEA-PVLRVERGVPVKFSIQAG 431
+D + +I + +V V +T A V ++ EA V++ G+ V S++A
Sbjct: 5 KDHEWVIVEGDVATVGITAYAAEQLG-----DVVFVETPEAGKVVKQGEGLAVVESVKAA 59
Query: 432 HDVALYITSDILGGNASLRNVTETIYA----GGPEAEGVKASPMELVWAPDRN 480
DV ++ +++ GN L ET+ A GG A+ A+P EL DR+
Sbjct: 60 SDVYAPVSGEVIEGNGELAGAPETVNALPESGGWFAKIKLANPAELDALMDRD 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 358,326,387
Number of Sequences: 539616
Number of extensions: 16196990
Number of successful extensions: 33090
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 33070
Number of HSP's gapped (non-prelim): 30
length of query: 904
length of database: 191,569,459
effective HSP length: 127
effective length of query: 777
effective length of database: 123,038,227
effective search space: 95600702379
effective search space used: 95600702379
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)