Citrus Sinensis ID: 048733

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------
MTEAAVNFALETLGPLLVEEIRLLGGVRKEVQSIKSELESLRSFLKDADARAAVEELEGGGEESVRTWVKQLRDEAYRIEDFIDEYALMVAKLPHESGLVGVLHRISRFIKKLRRRRGVAAEIQDIESALADIKRRGESYRFRSIDEPSRSGTRNVIPHDSRVRSFFVEDDEVVGIESIKDKLIDLMLNGRSKRSVVAVVGEGGLGKTTLAGKLFNNEGLKTHFSCRAWVTVGKEYNKNDLLRTIIKEFHRLSKHGRDGPDRHAEGPLLPTPEEIHNMEETDLITTLRDHLKDKSYMVVLDDVWKIDFWRDVEHALLDNKKCSRIIVTTRHMNVAKFCKLSSSVRIHELETLPPDEAWKLFCRKAFGPSSGGCCPSELKELSQDILAKCGGLPLAIVAVGGLLSTKNRIVSEWKKLFDRLGSMLGSDPHLKDCNRVLSEGYYDLPHHLKSCLLYFGLFPESCKINRGRLIRLWIAEGLVQYSKRFTSEQVAAEYLDELIDRSLVQVSNREIPGRAIICHVHDLMHEIIIRKTEELGFSRLLNGEDSSHCSKTRRITIQRSIDDGALESIKDSKVRSVILFNVDKLPDSFVKSCIANFKLMKVLDLEDSPINYLPEGVGNLFNLHLLNARNTKILDLAHTFVSELPEEIRNLKKLRSLIVFHYKYITGSIIPTEAAAKIHRGFGSLRGLQSLRGLLALPTIEADSQVLKELMMLRQLNMLSIRRQNGNGRDLCALIANLENVETLGVLMKSKEEILDLQSLSSPPQHLQYLSLRGNMKKLPDWILKLKNLIGSRLILSGLTEDPISWFPKLRKLVLLNFEAVKSVIIEKGAMPDIRELWIGPCPLLMEIPIGIDHLRNLELLTFHDMSKQVCCMTKNEKWEVTEHIPD
cHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEECccccHHHHHHHHHccccccEEEEEECcccccHHHHHHHHHccccccccccEEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHccccCEEEEEEccccHHHHHHHHHHccccccccEEEEEcccHHHHHHccccccccEEEcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccEEEEEcccccCEEEEEEcHHHHHHHHHHHHHcccEEEcccccccccccEEEEEEEcccccccccccccccEEEEEEEccccccccccccccccccEEEEEECccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEEccEEccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccEEEECccccccHHHHHHHHccccccEEEEEEcccccccccccccccccccEEEEEEEEcccccHHHcccccccEEEEEECcccccccccccccccccccccccccEEEECccccccccEEEEcccccccccccHHHccccccEEEECcccHHHHHHcccccccccccccc
MTEAAVNFALETLGPLLVEEIRLLGGVRKEVQSIKSELESLRSFLKDADARAA*****GGGEESVRTWVKQLRDEAYRIEDFIDEYALMVAKLPHESGLVGVLHRISRFIKKLRRRRGVAAEIQDIESALADIKRRGESYR********************RVRSFFVEDDEVVGIESIKDKLIDLMLNGRSKRSVVAVVGEGGLGKTTLAGKLFNNEGLKTHFSCRAWVTVGKEYNKNDLLRTIIKEFHRL*************GPLLPTPEEIHNMEETDLITTLRDHLKDKSYMVVLDDVWKIDFWRDVEHALLDNKKCSRIIVTTRHMNVAKFCKLSSSVRIHELETLPPDEAWKLFCRKAFGPSSGGCCPSELKELSQDILAKCGGLPLAIVAVGGLLSTKNRIVSEWKKLFDRLGSMLGSDPHLKDCNRVLSEGYYDLPHHLKSCLLYFGLFPESCKINRGRLIRLWIAEGLVQYSKRFTSEQVAAEYLDELIDRSLVQVSNREIPGRAIICHVHDLMHEIIIRKTEELGFSRLLNGED*****KTRRITIQRSIDDGALESIKDSKVRSVILFNVDKLPDSFVKSCIANFKLMKVLDLEDSPINYLPEGVGNLFNLHLLNARNTKILDLAHTFVSELPEEIRNLKKLRSLIVFHYKYITGSIIPTEAAAKIHRGFGSLRGLQSLRGLLALPTIEADSQVLKELMMLRQLNMLSIRRQNGNGRDLCALIANLENVETLGVLMKSKEEILDLQSLSSPPQHLQYLSLRGNMKKLPDWILKLKNLIGSRLILSGLTEDPISWFPKLRKLVLLNFEAVKSVIIEKGAMPDIRELWIGPCPLLMEIPIGIDHLRNLELLTFHDMSKQVCCMTKNEKWEVTEHIP*
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MTEAAVNFALETLGPLLVEEIRLLGGVRKEVQSIKSELESLRSFLKDADARAAVEELEGGGEESVRTWVKQLRDEAYRIEDFIDEYALMVAKLPHESGLVGVLHRISRFIKKLRRRRGVAAEIQDIESALADIKRRGESYRFRSIDEPSRSGTRNVIPHDSRVRSFFVEDDEVVGIESIKDKLIDLMLNGRSKRSVVAVVGEGGLGKTTLAGKLFNNEGLKTHFSCRAWVTVGKEYNKNDLLRTIIKEFHRLSKHGRDGPDRHAEGPLLPTPEEIHNMEETDLITTLRDHLKDKSYMVVLDDVWKIDFWRDVEHALLDNKKCSRIIVTTRHMNVAKFCKLSSSVRIHELETLPPDEAWKLFCRKAFGPSSGGCCPSELKELSQDILAKCGGLPLAIVAVGGLLSTKNRIVSEWKKLFDRLGSMLGSDPHLKDCNRVLSEGYYDLPHHLKSCLLYFGLFPESCKINRGRLIRLWIAEGLVQYSKRFTSEQVAAEYLDELIDRSLVQVSNREIPGRAIICHVHDLMHEIIIRKTEELGFSRLLNGEDSSHCSKTRRITIQRSIDDGALESIKDSKVRSVILFNVDKLPDSFVKSCIANFKLMKVLDLEDSPINYLPEGVGNLFNLHLLNARNTKILDLAHTFVSELPEEIRNLKKLRSLIVFHYKYITGSIIPTEAAAKIHRGFGSLRGLQSLRGLLALPTIEADSQVLKELMMLRQLNMLSIRRQNGNGRDLCALIANLENVETLGVLMKSKEEILDLQSLSSPPQHLQYLSLRGNMKKLPDWILKLKNLIGSRLILSGLTEDPISWFPKLRKLVLLNFEAVKSVIIEKGAMPDIRELWIGPCPLLMEIPIGIDHLRNLELLTFHDMSKQVCCMTKNEKWEVTEHIPD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Disease resistance protein RPM1 Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of the hypersensitive response.probableQ39214

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ECO, chain A
Confidence level:very confident
Coverage over the Query: 549-662,674-867
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Template: 3QFL, chain A
Confidence level:very confident
Coverage over the Query: 4-119
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Template: 2A5Y, chain B
Confidence level:very confident
Coverage over the Query: 174-255,270-537
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Template: 3SFZ, chain A
Confidence level:very confident
Coverage over the Query: 167-254,272-476,488-535
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View the model in PyMOL
Template: 2FNA, chain A
Confidence level:confident
Coverage over the Query: 169-528
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Template: 3FXI, chain A
Confidence level:probable
Coverage over the Query: 592-743,755-817
View the alignment between query and template
View the model in PyMOL