BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048735
(579 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 237/343 (69%), Gaps = 9/343 (2%)
Query: 222 NNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI-DIEMILSEVI 280
NN + + +Y +E+ RGR++ +A ++ GCRFLQ+K+ + +IEMI SEVI
Sbjct: 228 NNHFNHQLQQYLSLNYLCLEDFRGRVVPLAMNQHGCRFLQEKLQNNVTVKEIEMIFSEVI 287
Query: 281 DDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD 340
+ +LM Q N+++QKL+ + NEEQ T+++LS ++Q +L+ IC ++ G+RVMQKLL
Sbjct: 288 HHVAQLMLDQFGNYVVQKLVEICNEEQRTQILLSATTNQYQLIFICLNMHGTRVMQKLL- 346
Query: 341 AGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE 400
EY T T EQ S+ +SAL +TV+L+K G+HVI+ CL+ F L++E+AE
Sbjct: 347 --EYLT----TPEQISIAMSALWPVTVALTKDTSGHHVIQHCLKLFSCQDNMYLIKEVAE 400
Query: 401 NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP 460
NC ++AT+RSGCC+LQ C+ +Q E + +L+A+++ANA L+E YGNYVVQ+++GLKIP
Sbjct: 401 NCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQHLMGLKIP 460
Query: 461 QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
+V +++ Q G + +LS K SNVV+K L+ES +EQS+ II E++R P + L+LDP+
Sbjct: 461 EVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNVSMLLLDPF 520
Query: 521 GNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
GN+VIQ+A VS+G IR L +LV ++P ++S++YGK VL
Sbjct: 521 GNFVIQSALSVSKG-HIRNALVNLVRLHAPSMRSNLYGKKVLT 562
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 226/342 (66%), Gaps = 11/342 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+YSS+E++RGR+ +VA+D+ GCRFLQKKV+E P EMI EV D L++L+ Q AN+L
Sbjct: 306 NYSSLEQVRGRMAMVARDQDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIVDQFANYL 365
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA-GEYPTRQQLTQEQ 354
+QKL N Q+ +L+LS+V + +RL IC + G+R MQK+++ YP EQ
Sbjct: 366 VQKLFLACNGVQINQLLLSLVQNGERLKNICIHMHGTRAMQKIIEIINNYP-------EQ 418
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
++ LVSAL NITV L+K+ +G+HVI++CL+ F +YT+ LL EIA++C+++A D+SGCC+
Sbjct: 419 KASLVSALGNITVYLAKNHNGHHVIQQCLKCFEVEYTQYLLAEIAQSCIEIARDKSGCCV 478
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ + + E K I + ANA VLS YGNYVVQY+L + IP A ++ QL G++
Sbjct: 479 LQKALDSSYGELKECFITTITANASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQF 538
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS+ K SNVV+KCL E E + GI+ E+ P I++++ P+GNYV Q+A +V+
Sbjct: 539 VNLSMDKFGSNVVEKCLKECNEINAAGIVQELADSPSILRVLQHPFGNYVAQSALEVA-P 597
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRV 576
+ Q L +++ L SH++GK VLA+ R K +NRV
Sbjct: 598 EDLYQYLERVIIFFERELHSHLHGKKVLARTRSGKR--NNRV 637
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 220/325 (67%), Gaps = 2/325 (0%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E L GRI AKD+ GC+ ++K ++ I+M+L E+ID + ELM H N+++QKL
Sbjct: 209 LENLMGRIARYAKDQFGCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYVVQKL 268
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ-SLL 358
+ V +EEQ T+++L+V ++ +L+ IC ++ G+R +QKLL+ + +T QQ SL+
Sbjct: 269 VEVCSEEQRTRILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQVSLI 328
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+SAL + V L+K +G+HVIK CL+ F P+ K LL+ +A+NC D+ATD+SGCC+LQ C
Sbjct: 329 MSALSSGAVELAKDMNGHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKSGCCVLQQC 388
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + E + RL+A + A L++ YGNYV+Q++LGL+ P +TA++ QL G + LS
Sbjct: 389 VDHSMGEPRDRLVASITNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQLEGYFAVLS 448
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
K SNVV+KCLLES EQ T II+E++R P L++DPYGN+VIQ+A VS+G ++
Sbjct: 449 CDKFGSNVVEKCLLESRAEQCTQIISELLRSPCSSMLLVDPYGNFVIQSALKVSKG-LVQ 507
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLA 563
+ +L+ N P ++S +YG+ +LA
Sbjct: 508 GAMLELIRQNIPAMRSSIYGRKLLA 532
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 215/327 (65%), Gaps = 8/327 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S++E+ GR+ L+AKD+ GCRFLQ+K E P DIE I EVID + ELM N+L+
Sbjct: 417 YNSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLV 476
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NE+Q +++ ++ L+RI D+ G+R +QK+++ + P +Q S
Sbjct: 477 QKLLEVCNEDQRMQILCAITRKAGELVRISCDMHGTRAVQKVIETLKTP-------QQFS 529
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VS+LK V+L K+ +GNHV +RCLQ P++++ L E NC++LATDR GCC+LQ
Sbjct: 530 MVVSSLKPGIVTLIKNMNGNHVAQRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQ 589
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ ++ EQ+ LI+++ +NA +LS+ +GNYVVQ++ L++P TA+++ QL G Y
Sbjct: 590 KCLSHSEGEQRRCLISEITSNALILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGD 649
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ K SSNV++KCL + EE II ++I + + Q++ DPYGNYVIQ A S+G
Sbjct: 650 LSMQKYSSNVIEKCLKYASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQAALHQSKG-A 708
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ L + + + P L++ YGK VL+
Sbjct: 709 LHAALVEAIRPHVPVLRTSPYGKKVLS 735
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 222/332 (66%), Gaps = 8/332 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y S E+L G+++ +AKD GC+FLQK ++ I+M+ EVI + L+ N+++
Sbjct: 180 YLSWEDLSGKVVALAKDPYGCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYVV 239
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ VL+EEQ T ++ + + +L+RIC D+ G+RV+QKLL+ P +Q S
Sbjct: 240 QKLVEVLSEEQRTGILRMLTRTDFQLVRICLDVHGTRVVQKLLNCITNP-------QQVS 292
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VSAL V+L +G+HVI+ + F + K +L+++AENC +AT++SGCC+LQ
Sbjct: 293 IVVSALSQGAVALITDSNGHHVIQHFFKHFSTEDNKYILKQVAENCFGIATNKSGCCVLQ 352
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ ++ E + RL+A+++ANA +L+E YGNYVVQ+IL LK P++T +++AQ G Y A
Sbjct: 353 RCVEYSEGEARDRLLAEIIANALLLAEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMA 412
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS K SNVV+ CLL + EEQST II E++R+P + L++DP+GN+VIQ A +SQG +
Sbjct: 413 LSCNKYGSNVVESCLLTTREEQSTQIILELLRNPLVSMLLVDPFGNFVIQKALSISQG-Q 471
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
+++ L L+ N+ ++S++YG+ VL + N
Sbjct: 472 VQRYLVALIQRNAQKMRSNIYGQKVLVWLNKN 503
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 231/376 (61%), Gaps = 22/376 (5%)
Query: 196 SYSNLSH-GFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDE 254
S ++L+H G L + HL S + + N A+ Y+S++E+ GRI L+AKD+
Sbjct: 253 SLAHLNHNGKLLSNAHLFHSLSTPTAGTNLRAQP------PKYNSVDEVTGRIYLMAKDQ 306
Query: 255 QGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILS 314
GCRFLQ+ E P D+E I E+ID + ELM N+L+QKL+ V NE+Q +++ +
Sbjct: 307 HGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRT 366
Query: 315 VVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPH 374
+ L+RI D+ G+R +QK+++ + P EQ S++VSALK V+L K+ +
Sbjct: 367 ITRKAGELVRISCDMHGTRAVQKVIETLKTP-------EQFSMVVSALKPCIVTLIKNMN 419
Query: 375 GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADV 434
GNHV +RCLQ P+Y++ L E NC++LATDR GCC+LQ C+ ++ EQ+ L++++
Sbjct: 420 GNHVAQRCLQYLMPEYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEI 479
Query: 435 VANAYVLSEHSYG-------NYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
+NA +LS+ +G NYVVQ++ L++P D++ QL G Y LS+ K SSNVV
Sbjct: 480 TSNALILSQDPFGYCIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVV 539
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+KCL +GE + T II E+I + + Q++ DP+GNYVIQ A S+G + L + +
Sbjct: 540 EKCLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYVIQAALQQSKG-ALHAALVEAIRP 598
Query: 548 NSPFLQSHMYGKNVLA 563
+ P LQ+ YGK VL+
Sbjct: 599 HVPTLQTSPYGKKVLS 614
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 215/333 (64%), Gaps = 8/333 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+SI E RG+I +AKD+ GCRFLQ+ E++ DIEMI +E+ID + ELM N+L+
Sbjct: 272 YNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLV 331
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NE+Q +++ S+ L++I D+ G+R +QK+++ + +E+ S
Sbjct: 332 QKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAK-------REEEIS 384
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+++SALK+ V L K+ +GNHV++RCLQ P K L E +C++LATDR GCC+LQ
Sbjct: 385 IIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQ 444
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ ++ EQK L++++ +NA +LS+ +GNYV+QY+ L++ T +++ QL G Y
Sbjct: 445 KCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTE 504
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ KCSSNVV+KCL + ++ II E+I + + Q++LDPYGNYVIQ A S+G
Sbjct: 505 LSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKG-N 563
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+ L D + N L+++ YGK VL+ + K
Sbjct: 564 VHALLVDAIKLNISSLRTNPYGKKVLSALSSKK 596
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 213/332 (64%), Gaps = 11/332 (3%)
Query: 203 GFLSDHHHLGSSTNA-SSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQ 261
G + H GS N S+ N+ R Y S E+L G+I+ +AKD+ GC+FLQ
Sbjct: 147 GLMQRESHYGSMNNVLVSKSQNY---GRRPPWLQDYVSWEDLSGKIVALAKDQHGCKFLQ 203
Query: 262 KKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR 321
+ ++ I+M+ EVID + L+ N+++QKLI V++EEQ T+++ + + +
Sbjct: 204 RLIESATREQIDMLFYEVIDYVGGLIADPFGNYVVQKLIEVISEEQRTRVLRMLTRTDFQ 263
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
L+RIC D+ G+R +QKLL+ P Q SL+VSAL V+L K +G+HVI+
Sbjct: 264 LVRICLDVHGTRAVQKLLNCITNPL-------QVSLVVSALNQGAVALIKDSNGHHVIQH 316
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
++ F P K +L+++AE C ++AT++SGCC+LQ C+ ++ E + RL+A+++ANA +L
Sbjct: 317 SMKHFSPQDNKYILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRLVAEIIANALLL 376
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+E YGNYVVQ+IL LK+PQ+T +++ Q G Y ALS K SNVV+KCLL + E+QST
Sbjct: 377 AEDHYGNYVVQHILDLKMPQITENLLTQFEGSYMALSCNKYGSNVVEKCLLTTSEDQSTQ 436
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
II E++ +P L++DP+GN+VIQ A VSQ
Sbjct: 437 IILELLSNPGASMLLVDPFGNFVIQKALSVSQ 468
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 215/333 (64%), Gaps = 8/333 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S+ E RG+I +AKD+ GCRFLQ+ E++ DIEMI E+ID + ELM N+L+
Sbjct: 274 YNSLAEARGKIYYLAKDQHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELMIDPFGNYLV 333
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NE+Q +++ S+ L++I D+ G+R +QK+++ + +E+ S
Sbjct: 334 QKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAK-------REEEIS 386
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+++SALK+ V+L K+ +GNHV++RCLQ P K L E +C+DLATDR GCC+LQ
Sbjct: 387 IIISALKHGIVNLIKNVNGNHVVQRCLQYLLPHCGKFLFEAAITHCVDLATDRHGCCVLQ 446
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ ++ EQK L++++ +NA +LS+ +GNYV+QY+ L++ T +++ QL G Y
Sbjct: 447 KCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTE 506
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ KCSSNVV+KCL + ++ II E+I + + Q++LDPYGNYVIQ A S+G
Sbjct: 507 LSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALRQSKG-N 565
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+ L D + + L+++ YGK VL+ + K
Sbjct: 566 VHALLVDAIKLHISSLRTNPYGKKVLSALSSKK 598
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 215/338 (63%), Gaps = 8/338 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
++ + S+ +L+GR+ + A+ + R LQ +DER P IEMI EV D +H+LM Q N
Sbjct: 284 QSDHPSLYKLKGRVAVAARSQILYRVLQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGN 343
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
H+IQKL V +E QMT+LILS++ +Q+RLL +C L G+R MQK+++ + P +
Sbjct: 344 HVIQKLFEVCSEAQMTQLILSLIHNQRRLLGLCFHLVGTRAMQKMIEHIKTP-------K 396
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q+ LL L TV LS++ +G HVI++CL+ FP D K L++EIAE+ LD+A D+SGCC
Sbjct: 397 QRLLLTQVLIRRTVILSQNQNGYHVIQKCLEHFPFDDIKPLIKEIAESFLDIAMDKSGCC 456
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+L + AQ E K L+ + +ANA +LSE YGNYVVQ++L +I T ++ +L G
Sbjct: 457 VLNRALDCAQGELKHLLLLETIANAMLLSESPYGNYVVQHVLDERIQHATIGILEKLKGY 516
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ +LS+ K SNVV+KCL+ SGEE ++ II E + P V + + +GNYV+Q A +VS+
Sbjct: 517 FVSLSMNKFGSNVVEKCLIWSGEENASMIIEEFMHSPYFVNICRNNFGNYVVQKALEVSK 576
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
G IR L + D+ P L S + K V+ K R + R
Sbjct: 577 G-GIRNALVSRINDSYPDLYSDINAKRVVRKARDIRFR 613
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 215/341 (63%), Gaps = 16/341 (4%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+SI E RG+I +AKD+ GCRFLQ+ E++ DIEMI +E+ID + ELM N+L+
Sbjct: 272 YNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLV 331
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NE+Q +++ S+ L++I D+ G+R +QK+++ + +E+ S
Sbjct: 332 QKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAK-------REEEIS 384
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+++SALK+ V L K+ +GNHV++RCLQ P K L E +C++LATDR GCC+LQ
Sbjct: 385 IIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQ 444
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYG--------NYVVQYILGLKIPQVTADVVA 468
C+ ++ EQK L++++ +NA +LS+ +G NYV+QY+ L++ T +++
Sbjct: 445 KCLGYSEGEQKQHLVSEIASNALLLSQDPFGIDANFFCRNYVLQYVFELQLQWATFEILE 504
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTA 528
QL G Y LS+ KCSSNVV+KCL + ++ II E+I + + Q++LDPYGNYVIQ A
Sbjct: 505 QLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAA 564
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
S+G + L D + N L+++ YGK VL+ + K
Sbjct: 565 LKQSKG-NVHALLVDAIKLNISSLRTNPYGKKVLSALSSKK 604
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 208/327 (63%), Gaps = 10/327 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S++E+ GRI ++KD+ GCRFLQ+K + +P D++ I E+ID + ELM N+L+
Sbjct: 389 YNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLV 448
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V E+Q +++ ++ L+RI ++ G+R +QK+++ T EQ S
Sbjct: 449 QKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLR-------TSEQFS 501
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VS+LK V+L K +GNHV + CLQ P+Y + L E NC++LATDR GCC+LQ
Sbjct: 502 MIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQ 561
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ + EQ+ R+I ++ +NA +LS+ +GNYVVQY+ + P D++ QL G Y
Sbjct: 562 KCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGD 619
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LSL K SSNVV+KCL +G+E II E+I +P I Q++ DPYGNYVIQ A + S+G
Sbjct: 620 LSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSKG-A 678
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLA 563
I L +++ + L++ YGK VL+
Sbjct: 679 IHAALIEVIRSHVHVLRTSPYGKKVLS 705
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 208/327 (63%), Gaps = 10/327 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S++E+ GRI ++KD+ GCRFLQ+K + +P D++ I E+ID + ELM N+L+
Sbjct: 400 YNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLV 459
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V E+Q +++ ++ L+RI ++ G+R +QK+++ T EQ S
Sbjct: 460 QKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLR-------TSEQFS 512
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VS+LK V+L K +GNHV + CLQ P+Y + L E NC++LATDR GCC+LQ
Sbjct: 513 MIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQ 572
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ + EQ+ R+I ++ +NA +LS+ +GNYVVQY+ + P D++ QL G Y
Sbjct: 573 KCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGD 630
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LSL K SSNVV+KCL +G+E II E+I +P I Q++ DPYGNYVIQ A + S+G
Sbjct: 631 LSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSKG-A 689
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLA 563
I L +++ + L++ YGK VL+
Sbjct: 690 IHAALIEVIRSHVHVLRTSPYGKKVLS 716
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 219/345 (63%), Gaps = 14/345 (4%)
Query: 219 SRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSE 278
SR++N + R Y+S++E+ GRI L+AKD+ GCRFLQ+K+ E N DIE I E
Sbjct: 479 SRHDNLRLQTR------KYNSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLE 532
Query: 279 VIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKL 338
++ + ELM H N+L+QKL+ V +E+Q T+++ ++ + LL + ++ G+R +QK+
Sbjct: 533 IVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKV 592
Query: 339 LDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
++ + P EQ ++V++LK V+L K +G HV + CLQ P Y + L E +
Sbjct: 593 IETIKSP-------EQFLMVVASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAV 645
Query: 399 AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK 458
+ +C++LATD GC +LQ C+ + E + RL++ ++ANA +LS+ +GNYVVQY+ L+
Sbjct: 646 SAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELE 705
Query: 459 IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILD 518
+V+ QL G Y LS+ K SSNVV+KCL +GEE+ II E + HP++ Q++LD
Sbjct: 706 GSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLD 765
Query: 519 PYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
PY NYVIQTA + S+G + L + + + P L+++ YGK VL+
Sbjct: 766 PYANYVIQTALNHSKG-ALHAALLEAIRPHIPALRTNPYGKKVLS 809
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 219/345 (63%), Gaps = 14/345 (4%)
Query: 219 SRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSE 278
SR++N + R Y+S++E+ GRI L+AKD+ GCRFLQ+K+ E N DIE I E
Sbjct: 479 SRHDNLRLQTR------KYNSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLE 532
Query: 279 VIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKL 338
++ + ELM H N+L+QKL+ V +E+Q T+++ ++ + LL + ++ G+R +QK+
Sbjct: 533 IVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKV 592
Query: 339 LDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
++ + P EQ ++V++LK V+L K +G HV + CLQ P Y + L E +
Sbjct: 593 IETIKSP-------EQFLMVVASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAV 645
Query: 399 AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK 458
+ +C++LATD GC +LQ C+ + E + RL++ ++ANA +LS+ +GNYVVQY+ L+
Sbjct: 646 SAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELE 705
Query: 459 IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILD 518
+V+ QL G Y LS+ K SSNVV+KCL +GEE+ II E + HP++ Q++LD
Sbjct: 706 GSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLD 765
Query: 519 PYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
PY NYVIQTA + S+G + L + + + P L+++ YGK VL+
Sbjct: 766 PYANYVIQTALNHSKG-ALHAALLEAIRPHIPALRTNPYGKKVLS 809
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 219/345 (63%), Gaps = 14/345 (4%)
Query: 219 SRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSE 278
SR++N + R Y+S++E+ GRI L+AKD+ GCRFLQ+K+ E N DIE I E
Sbjct: 378 SRHDNLRLQTR------KYNSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLE 431
Query: 279 VIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKL 338
++ + ELM H N+L+QKL+ V +E+Q T+++ ++ + LL + ++ G+R +QK+
Sbjct: 432 IVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKV 491
Query: 339 LDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
++ + P EQ ++V++LK V+L K +G HV + CLQ P Y + L E +
Sbjct: 492 IETIKSP-------EQFLMVVASLKPGIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAV 544
Query: 399 AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK 458
+ +C++LATD GC +LQ C+ + E + RL++ ++ANA +LS+ +GNYVVQY+ L+
Sbjct: 545 SAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIANALILSQDPFGNYVVQYVFELE 604
Query: 459 IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILD 518
+V+ QL G Y LS+ K SSNVV+KCL +GEE+ II E + HP++ Q++LD
Sbjct: 605 GSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLD 664
Query: 519 PYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
PY NYVIQTA + S+G + L + + + P L+++ YGK VL+
Sbjct: 665 PYANYVIQTALNHSKG-ALHAALLEAIRPHIPALRTNPYGKKVLS 708
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 206/325 (63%), Gaps = 10/325 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S++E+ GRI ++KD+ GCRFLQ+K + +P D++ I E+ID + ELM N+L+
Sbjct: 430 YNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLV 489
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V E+Q +++ ++ L+RI ++ G+R +QK+++ T EQ S
Sbjct: 490 QKLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLR-------TSEQFS 542
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VS+LK V+L K +GNHV + CLQ P+Y + L E NC++LATDR GCC+LQ
Sbjct: 543 MIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMPEYREFLXEAAITNCVELATDRHGCCVLQ 602
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ + EQ+ R+I ++ +NA +LS+ +GNYVVQY+ + P D++ QL G Y
Sbjct: 603 KCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGD 660
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LSL K SSNVV+KCL +G+E II E+I +P I Q++ DPYGNYVIQ A + S+G
Sbjct: 661 LSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSKG-A 719
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNV 561
I L +++ + L++ YGK V
Sbjct: 720 IHAALIEVIRSHVHVLRTSPYGKKV 744
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 201/329 (61%), Gaps = 9/329 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
++S++E+RGRI L+AKD+ GCRFLQ+K E DIE I E+ID + ELM N+L+
Sbjct: 408 FNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLV 467
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V N+ Q +++ + + L+ I D+ G+R +QK+++ + TQEQ
Sbjct: 468 QKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLK-------TQEQVH 520
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VSALK+ V+L K+ +GNHV + CL P + L + +C+DLA DR GCC+LQ
Sbjct: 521 MIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQ 580
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ + + LI ++ NA ++S+ YGNYVVQ+IL L + T ++ QL G Y
Sbjct: 581 KCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGD 640
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ K SSNVV+KCL +G Q T I+ E+I P +++ DPYGNY IQTA + ++G
Sbjct: 641 LSMQKYSSNVVEKCLQFAG-GQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEG-T 698
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + P L+ YGK VLA V
Sbjct: 699 LHTKLVEAIRPHVPVLRMSPYGKKVLAIV 727
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 201/329 (61%), Gaps = 9/329 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
++S++E+RGRI L+AKD+ GCRFLQ+K E DIE I E+ID + ELM N+L+
Sbjct: 375 FNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLV 434
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V N+ Q +++ + + L+ I D+ G+R +QK+++ + TQEQ
Sbjct: 435 QKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLK-------TQEQVH 487
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VSALK+ V+L K+ +GNHV + CL P + L + +C+DLA DR GCC+LQ
Sbjct: 488 MIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQ 547
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ + + LI ++ NA ++S+ YGNYVVQ+IL L + T ++ QL G Y
Sbjct: 548 KCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGD 607
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ K SSNVV+KCL +G Q T I+ E+I P +++ DPYGNY IQTA + ++G
Sbjct: 608 LSMQKYSSNVVEKCLQFAG-GQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEG-T 665
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + P L+ YGK VLA V
Sbjct: 666 LHTKLVEAIRPHVPVLRMSPYGKKVLAIV 694
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 201/330 (60%), Gaps = 8/330 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y SI+E+ GR+ +++KD+ CRFLQK + E DI+ I E+ID++ +LM +A++L
Sbjct: 421 TYKSIDEVMGRVCMLSKDQDACRFLQKLLSEGTQEDIDKIFGEIIDNVGDLMVDPTAHYL 480
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QK++ +Q T +I + + +L + ++ G+RV+QK++D P +Q
Sbjct: 481 VQKILEECTNDQRTHMIREITKAPIKLHKASCNVHGTRVVQKVIDTMNTP-------DQV 533
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S+LVSAL + L +GNHV+ CLQK P++ +LE A L LA DR GCC+L
Sbjct: 534 SMLVSALNTGMMCLMTDSYGNHVVDHCLQKLLPEHKAFILEAAASCYLQLARDRHGCCVL 593
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + +EQ+ L+ + ++A LSE YGNYV+Q+IL L I +T VV +LAG +
Sbjct: 594 QKCIGHSSDEQRNNLLCKITSSALTLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFG 653
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ KC S+VV+ CL + IINE++ P+++ +ILD YGN+VIQTA QG
Sbjct: 654 NLSMQKCGSHVVEHCLKLAPRLICDRIINELMHDPKLLDIILDQYGNFVIQTALKQCQGE 713
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + ++ +QS+MYGK VL+++
Sbjct: 714 H-HAAFVETIKPHTAVMQSNMYGKKVLSRI 742
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 212/350 (60%), Gaps = 13/350 (3%)
Query: 224 FYARARHHHH----RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEV 279
F +R HH + Y+ ++E+ GRI L+AKD+ GCRFLQKK DE P D++ I E+
Sbjct: 7 FDSRLSVAHHLQQQQPKYTKLDEVEGRIYLIAKDQHGCRFLQKKFDEGGPEDVQKIFYEI 66
Query: 280 IDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL 339
I + ELM+ N+L+QKL+ V +E Q + IL VV++ L++I ++ G+R +QKL+
Sbjct: 67 IGHITELMKDPFGNYLVQKLLEVCDESQRME-ILRVVTTDGELVKISLNMHGTRAVQKLI 125
Query: 340 DAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA 399
+ + P +Q +++++AL V L K +GNHV++RCLQK + ++ + + A
Sbjct: 126 ETLKSP-------DQVTMVITALTEGVVELIKDLNGNHVVQRCLQKLSHEDSQFIFDAAA 178
Query: 400 ENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+C+++AT R GCC++Q C+ A QK RL+A + ANA LS+ YGNYVVQYIL LK
Sbjct: 179 AHCVEIATHRHGCCVMQRCVDFASAPQKQRLVAVIAANALTLSQDPYGNYVVQYILDLKQ 238
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDP 519
T++V+ +L G Y L++ K SSNVV+KCL EE ++ E+ + QL+ D
Sbjct: 239 GWATSEVMLRLEGSYAFLAMQKFSSNVVEKCLKLGVEEHRGRLVRELTASSRLGQLLQDQ 298
Query: 520 YGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
Y NYVIQ+A V +G + L D + P L++ YGK +L++ K
Sbjct: 299 YANYVIQSALSVCKG-PLHAGLVDAIRPYLPALRNSPYGKRILSRTNIKK 347
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 204/333 (61%), Gaps = 9/333 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+ +EE+ GRI L+AKD+ GCRFLQKK DE D++ I E+I + ELM+ N+L+
Sbjct: 38 YTKLEEVEGRIYLIAKDQHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLV 97
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V +E Q + IL VV+ L++I ++ G+R +QKL++ + P EQ +
Sbjct: 98 QKLLEVCDESQRME-ILRVVTMDGELVKISLNMHGTRAVQKLIETLKSP-------EQVT 149
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++++AL V L K +GNHV++RCLQK + ++ + + A +C+++AT R GCC++Q
Sbjct: 150 MVITALTEGVVELIKDLNGNHVVQRCLQKLCHEDSQFIFDAAAAHCVEIATHRHGCCVMQ 209
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ A QK RL+A + ANA LS+ YGNYVVQYIL LK T++V+ +L G Y
Sbjct: 210 RCVDFASAPQKQRLVAVIAANALALSQDPYGNYVVQYILDLKQGWATSEVMVRLEGSYAF 269
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
L++ K SSNVV+KCL EE ++ E+ + QL+ D Y NYVIQ+A V +G
Sbjct: 270 LAMQKFSSNVVEKCLKLGMEENRGRLVRELTASSRLGQLLQDQYANYVIQSALSVCKG-P 328
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+ L D + P L++ YGK +L++ K
Sbjct: 329 LHAGLVDAIRPYLPALRNSPYGKRILSRTNIKK 361
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 9/325 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+EE+ GRI AKD+ GCRFLQKK E + +I+ I +EVID L +LM N+L+QKL
Sbjct: 1 LEEIEGRIYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKL 60
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ V N+ Q + IL VV+ L+ I ++ G+R +QKL++ + P EQ S++
Sbjct: 61 LEVSNDTQRRE-ILRVVTRNGELVNISLNMHGTRAVQKLIETLKSP-------EQVSMVT 112
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S+L V+L K +GNHV+++CLQK + + +++ A +C+D+ T R GCC+LQ CI
Sbjct: 113 SSLMQGVVTLIKDSNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCI 172
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A Q L++++ ANA +LS+ YGNYVVQYIL L+ +T DV+ +L G + L++
Sbjct: 173 DFASGTQCHFLVSEIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAM 232
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KCL +S E+ II EII + QL+ DP+ NYVIQ A V++G +
Sbjct: 233 QKFSSNVVEKCLKQSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVAKG-SLHT 291
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAK 564
L D + + P L+S +GK +L++
Sbjct: 292 ALVDAIRPHVPVLRSSPFGKRILSR 316
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 207/340 (60%), Gaps = 8/340 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+ SYSS++E+ G+I L+AKD+ GCRFLQ+ E +++ + +I+ + EL+ N
Sbjct: 439 QMSYSSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGN 498
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L+QKL+ N +Q ++ + +L++ D+ G+RV+QK+++ P +
Sbjct: 499 YLVQKLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSP-------D 551
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ S++V AL + ++L +G HV RCLQKF ++ LL E +LA DR GCC
Sbjct: 552 EVSMVVCALSSGAITLMMDANGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCC 611
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q CI A +EQK +L+ ++ + A LSEH YGNYVVQYIL L I T +++ +L G
Sbjct: 612 IIQKCILHANKEQKNQLLYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEGH 671
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ +LS+ K SSNVV+KCL E+ + II+E+I P+++ +++DPYGNYVIQTA +
Sbjct: 672 FGSLSMQKSSSNVVEKCLKEASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALKECE 731
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFH 573
+R L + + L+++M+GK +L+K KNR H
Sbjct: 732 DAAVRAVLIGAIRPHVAALRNNMFGKRILSKTY-LKNRKH 770
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
+Y L +KIPQ++ V ++ G+ L+ + +Q+ E E + + II H
Sbjct: 430 EYGLAMKIPQMSYSSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEH-- 487
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQ--SHMYGKNVLAKV 565
I +L++DP+GNY++Q + + +Y++ ++ M+G V+ KV
Sbjct: 488 IGELVVDPFGNYLVQKLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKV 543
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 202/325 (62%), Gaps = 9/325 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+EE+ GRI AKD+ GCRFLQKK E + +I+ I +EVID L +LM N+L+QKL
Sbjct: 1 LEEIEGRIYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKL 60
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ V N+ Q + IL V+ L+ I ++ G+R +QKL++ + P EQ S++
Sbjct: 61 LEVSNDTQRRE-ILRGVTRNGELVNISLNMHGTRAVQKLIETLKSP-------EQVSMVT 112
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S+L V+L K +GNHV+++CLQK + + +++ A +C+D+ T R GCC+LQ CI
Sbjct: 113 SSLMQGVVTLIKDSNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCI 172
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A Q L++++ ANA +LS+ YGNYVVQYIL L+ +T DV+ +L G + L++
Sbjct: 173 DFASGTQCHFLVSEIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAM 232
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KCL +S E+ II EII + QL+ DP+ NYVIQ A V++G +
Sbjct: 233 QKFSSNVVEKCLKQSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVAKG-SLHT 291
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAK 564
L D + + P L+S +GK +L++
Sbjct: 292 ALVDAIRPHVPVLRSSPFGKRILSR 316
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 204/334 (61%), Gaps = 17/334 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+S++E G+I L+AKD+ GCRFLQ+ E DIEMI E+I + ELM N+LIQ
Sbjct: 416 NSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQ 475
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+GV +E+Q + IL ++ L+RI ++ G+R +QKL++ + P EQ SL
Sbjct: 476 KLLGVCDEDQRLQ-ILYKINRPGELIRISCNMHGTRAVQKLIETLKTP-------EQFSL 527
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYT-KDLLEEIAENCLDLATDRSGCCLLQ 416
+VS LK V L K+ +GNHV + CLQ PDY K L + ++C+++ATDR GCC+LQ
Sbjct: 528 IVSLLKTGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQ 587
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK-----IPQVTADVVAQLA 471
C+ ++ + RL+++VV NA VLS+ YGNYVVQ+ L L +P VT+ + +L
Sbjct: 588 KCLAVSDARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLE 647
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
G + LS+ K SSNVV++C+ +G+E +++E+I Q++L+PYGNY +Q
Sbjct: 648 GHFSDLSIQKYSSNVVERCVY-AGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLAR 706
Query: 532 SQ--GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
S + L + + P L+++MYGK VLA
Sbjct: 707 SGICKSSVHAKLVAAIRPHVPLLRTNMYGKKVLA 740
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 204/334 (61%), Gaps = 17/334 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+S++E G+I L+AKD+ GCRFLQ+ E DIEMI E+I + ELM N+LIQ
Sbjct: 416 NSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQ 475
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+GV +E+Q + IL ++ L+RI ++ G+R +QKL++ + P EQ SL
Sbjct: 476 KLLGVCDEDQRLQ-ILYKINRPGELIRISCNMHGTRAVQKLIETLKTP-------EQFSL 527
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYT-KDLLEEIAENCLDLATDRSGCCLLQ 416
+VS LK V L K+ +GNHV + CLQ PDY K L + ++C+++ATDR GCC+LQ
Sbjct: 528 IVSLLKTGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQ 587
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK-----IPQVTADVVAQLA 471
C+ ++ + RL+++VV NA VLS+ YGNYVVQ+ L L +P VT+ + +L
Sbjct: 588 KCLAVSDARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLE 647
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
G + LS+ K SSNVV++C+ +G+E +++E+I Q++L+PYGNY +Q
Sbjct: 648 GHFSDLSIQKYSSNVVERCVY-AGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLAR 706
Query: 532 SQ--GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
S + L + + P L+++MYGK VLA
Sbjct: 707 SGICKSSVHAKLVAAIRPHVPLLRTNMYGKKVLA 740
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 206/340 (60%), Gaps = 8/340 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+ SYSS++E+ G+I L+AKD+ GCRFLQ+ E +++ + +I+ + EL+ N
Sbjct: 438 QMSYSSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGN 497
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L+QKL+ N +Q ++ + +L++ D+ G+RV+QK+++ P +
Sbjct: 498 YLVQKLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSP-------D 550
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ S++V AL + ++L +G HV RCLQKF ++ LL E +LA DR GCC
Sbjct: 551 EVSMVVCALSSGAITLMMDANGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCC 610
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q CI A +EQK +L+ ++ + A LSEH YGNYVVQYIL L I T +++ +L
Sbjct: 611 IIQKCILHANKEQKNQLLYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEDH 670
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ +LS+ K SSNVV+KCL E+ + II+E+I P+++ +++DPYGNYVIQTA +
Sbjct: 671 FGSLSMQKSSSNVVEKCLKEASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALKECE 730
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFH 573
+R L + + L+++M+GK +L+K KNR H
Sbjct: 731 DAAVRAVLIGAIRPHVAALRNNMFGKRILSKTY-LKNRKH 769
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
+Y L +KIPQ++ V ++ G+ L+ + +Q+ E E + + II H
Sbjct: 429 EYGLAMKIPQMSYSSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEH-- 486
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQ--SHMYGKNVLAKV 565
I +L++DP+GNY++Q + + +Y++ ++ M+G V+ KV
Sbjct: 487 IGELVVDPFGNYLVQKLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKV 542
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 207/328 (63%), Gaps = 8/328 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S+ E RG I L+AKD+ GCRFLQ+ DE P D+++I +E+ID + ELM + N+L+
Sbjct: 439 YNSLAEARGLIYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLM 498
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V +E+Q ++IL V +L+RI ++ G+RV+QKL++ TRQQ+ S
Sbjct: 499 QKLLDVCDEKQRMQIILMVTEEPGQLVRISLNIHGTRVVQKLIET--LKTRQQI-----S 551
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L+V+AL+ ++L K +GNHV++ CLQ + K + A+ C+D+AT + GCC+LQ
Sbjct: 552 LVVAALEPGFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQ 611
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI ++ E + +L+ ++ ANA +L++ +GNYVVQ+IL L+IP TA + Q +Y
Sbjct: 612 RCIGHSRGEHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVH 671
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ K S+VV+KCL +E + +I+E++ P QL+ DP+ NYVIQ+A S+G
Sbjct: 672 LSMQKFGSHVVEKCLAVFNDENQSRVIHELLSAPHFEQLLQDPHANYVIQSALRHSEG-H 730
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ L + + + ++ Y K + ++
Sbjct: 731 VHNLLVEAIESHKAISRNSPYSKKIFSQ 758
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 207/329 (62%), Gaps = 8/329 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y+S+ E +G I L+AKD+ GCRFLQ+ DE P D+++I +E+ID + ELM + N+L
Sbjct: 445 NYNSLAEAQGLIYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYL 504
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V +E Q ++IL V +L+RI + G+RV+QK+++ TRQQ+
Sbjct: 505 MQKLLDVCDENQRMQMILMVTEEPGQLVRISLNTHGTRVVQKVIET--LKTRQQI----- 557
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL+V+AL+ ++L K +GNHV++ CLQ + K + A+ C+D+AT + GCC+L
Sbjct: 558 SLVVAALEPGFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVL 617
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI ++ E + +L+ ++ ANA +L++ +GNYVVQ+IL L+IP TA + Q G+Y
Sbjct: 618 QRCIGHSRGEHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFEGKYV 677
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K S+VV+KCL +E + +I+E++ P QL+ DP+ NYVIQ+A S+G
Sbjct: 678 HLSMQKFGSHVVEKCLAVFNDENRSRVIHELLSAPHFEQLLQDPHANYVIQSAVRHSEG- 736
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ L + + + ++ Y K + ++
Sbjct: 737 HVHNLLVEAIESHKAISRNSPYSKKIFSQ 765
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 224/378 (59%), Gaps = 12/378 (3%)
Query: 204 FLSDHHHLGSSTNASSRYNNFYARARH---HHHRTSYSSIEELRGRIILVAKDEQGCRFL 260
F ++H+HL + +N SSR + ++ +Y+S++E+ GRI ++AKD+ GCRFL
Sbjct: 399 FSNEHNHLDNQSNDSSRLDRLHSEFLSLVMQSREPNYNSVDEVAGRIYMLAKDQNGCRFL 458
Query: 261 QKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
QK + + D+E + E+ID + +LM N+L+QKL+ +E+Q +++ V
Sbjct: 459 QKVFAQGSQEDVEKVFGEIIDHIGDLMVDPFGNYLVQKLLEGCSEDQRMRILCEVTKMPG 518
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIK 380
+L+ + ++ G+R +QK+++ P +Q S +VSAL + L P+G+HV
Sbjct: 519 QLIAVSCNMHGTRAVQKIIETINSP-------DQVSKVVSALSPGAMHLMLDPNGSHVAN 571
Query: 381 RCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV 440
RCLQK P+ LL+ + L+LAT + GCC++Q CI + +EQK L+++++++A
Sbjct: 572 RCLQKLLPESKVFLLDAATLHYLELATHQQGCCIIQKCIEHSNDEQKYSLLSNIISSALT 631
Query: 441 LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQST 500
LS+ +GNYV+Q IL I T +V +L G + LS+ KC S+VV+ CL ++ + +
Sbjct: 632 LSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLSMQKCGSHVVENCLRQAPQHKRD 691
Query: 501 GIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKN 560
II E++ P++ +++D +GN+VIQTA + +G + + + ++ +QSHMYGK
Sbjct: 692 RIIGELMNDPKLPHIMVDQFGNFVIQTALEHCKG-TLHTAFVEAIRPHAAAMQSHMYGKR 750
Query: 561 VLAKVRGNKNRFHNRVAM 578
VL+K KN+ H V +
Sbjct: 751 VLSKTY-LKNKQHRVVVL 767
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 205/327 (62%), Gaps = 8/327 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S+ E +G I ++AKD+ GCRFLQ+ DE P D+++I +E+ID + ELM + N+L+
Sbjct: 486 YNSLVEAQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLM 545
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NEEQ ++++ + L+RI + G+RV+QKL++ TRQQ+++
Sbjct: 546 QKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIET--LKTRQQISR---- 599
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++SAL+ ++L K +GNHVI+RCLQ + K + A+ C+++AT + GCC+LQ
Sbjct: 600 -VISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQ 658
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + E + L+A++ +N ++L++ ++GNYVVQ+IL LKIP T++++AQ G Y
Sbjct: 659 RCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVH 718
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS + SS+VV+KCL EE + I++E++ QL+ P+ NYVIQ A V +G
Sbjct: 719 LSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKALQVYEG-P 777
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ + + + +++ Y K + +
Sbjct: 778 LHNAFIEAIESHKAIMRNSPYSKKIFS 804
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 197/329 (59%), Gaps = 7/329 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
YSS++E+ G + +AKD+ GCRFLQ+ E + D + VI+ + ELM N+LI
Sbjct: 357 YSSVDEVVGELYHLAKDQNGCRFLQRIFIEGSREDARKVFDGVIEHIDELMVDPFGNYLI 416
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QK+ N+ Q ++ + +L+ + ++ G+RV+QK++++ T ++ S
Sbjct: 417 QKIFEKCNDNQKMHILYEITKIPGQLIEVACNMHGTRVVQKVIESIS-------TSDEVS 469
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++VSAL + ++L +G HV +RCL K P+ L+ + C++LA DR GCC++Q
Sbjct: 470 MVVSALSHGAITLMMDSNGCHVAERCLLKLSPEGKAFLVNAATKYCVELAKDRQGCCIIQ 529
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A +EQ+ RL+ + A L+E YGNYV+Q++LGL + T +V+ +L G Y
Sbjct: 530 KCIAHASKEQRNRLLYSITTRALELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGY 589
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS KCSSNVV+KCL E+ E + II E+I P ++ +++D YGNYVIQTA S+G
Sbjct: 590 LSTQKCSSNVVEKCLREAPERERARIILELIHDPRLLNVLVDKYGNYVIQTALRESEGTA 649
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + ++ L+++MYGK VL+K
Sbjct: 650 VEAALIRAIKPHAGALRNNMYGKRVLSKA 678
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y SI+E GR+ +++KD+ CRFLQK + E DI+ I SE+I+++ ELM +A++L
Sbjct: 402 TYKSIDEAMGRVCILSKDQDACRFLQKVLTEGTQEDIDKIFSEIIENVGELMVDPTAHYL 461
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QK++ V +Q T LI + + L + ++ G+RV+QK+++ T +Q
Sbjct: 462 VQKILEVCTNDQRTYLIREITKAPISLHKASCNMHGTRVVQKVIETMN-------TSDQV 514
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S++VS L + L +GNHV CL+K P++ LLE L LA DR GCC+L
Sbjct: 515 SMVVSTLNTGIMRLMTDSYGNHVALHCLEKLLPEHKAFLLETATSRYLQLARDRHGCCVL 574
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + +EQ+ L+ + ++A VLSE YGNYV+Q+IL L I T +V +LAG +
Sbjct: 575 QKCIENSSDEQRNNLLCKITSSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFG 634
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ KC S+VV+ C L+ IINE++ P+++ +ILD YGN+VIQTA QG
Sbjct: 635 NLSMQKCGSHVVEHC-LKLPRPICDRIINELMHDPKLLHIILDQYGNFVIQTALKQCQGE 693
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + ++ LQS+MYGK VL++
Sbjct: 694 Q-HAAFVETIRPHTAVLQSNMYGKRVLSRT 722
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 205/333 (61%), Gaps = 9/333 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RGR+ +AKD G + LQ+ ++ P + E+I+ + ELM +I K+
Sbjct: 209 FDEFRGRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKM 268
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ V N++Q T+++L V + +RIC L GSR ++KLL+ + T+EQ+ L++
Sbjct: 269 VEVCNQDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLE-------KVTTREQRGLIM 321
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
SAL + LSK +G+ V+ CL+ FP T+ L IA N L L+ D++GCC+LQYC+
Sbjct: 322 SALTPGAIVLSKDINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCV 381
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
AQ K LI +++ +A +L+E YGNYV+Q+++ LKIP V+ ++ QL ++ +LS
Sbjct: 382 SHAQGATKNLLIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSC 441
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR-IR 538
K SNVV+K L +SG + S+ II E++ P + +L+ DPYGN+VI TA + +G R I+
Sbjct: 442 NKYGSNVVEKFLHDSGVDISSCIIIELLNDPNVTRLLTDPYGNFVISTALNKFKGARFIK 501
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L +LV NS ++S+M+GK VL K G KNR
Sbjct: 502 NALEELVEANSQMMRSNMFGKKVLDKFEG-KNR 533
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 208/331 (62%), Gaps = 10/331 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S++E+ GRI +AKD+ GCRFLQ++ DE D++ I E+ID + +LM N+L+QK
Sbjct: 1 SLKEVEGRIYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQK 60
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ V E+Q + IL VV S L+ I ++ G+R +QKL++ + P EQ S++
Sbjct: 61 LLEVCTEDQRLE-ILRVVCSGDELISISLNMHGTRAVQKLIETLKSP-------EQVSMI 112
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
S+L+ V L K +GNHV++RCLQ+ + + + + A++C+++ T R GCC+LQ C
Sbjct: 113 TSSLEQGIVILIKDLNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRC 172
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ ++ QK RL+ ++ ANA VLS+ YGNYVVQYIL + P + +V+AQL G + L+
Sbjct: 173 VDFSKGVQKERLVGEIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLA 231
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ K SSNVV+KCL + +++ II+E+ + + QL+ DP+ NYVIQ A V++G +
Sbjct: 232 MQKFSSNVVEKCLKQGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKG-ALH 290
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+L + + + P L+S YGK +L + K
Sbjct: 291 ASLVEAIRPHLPALRSSPYGKRILCRTNLKK 321
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 198/330 (60%), Gaps = 8/330 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y S++E+ GRI ++AKD+ GCRFLQK E D E IL+E+ID ELM N+L
Sbjct: 413 NYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKEDFEKILAEIIDHFGELMIDPFGNYL 472
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ +++Q T++I + L+ + ++ G+R +QK++D P EQ
Sbjct: 473 VQKLLEECSDDQRTRIICEITRVPGELITVACNMHGTRTVQKVIDTINTP-------EQI 525
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S +VSAL + L +G+HV +RCL+K P+Y LL+ A L LA D+ GCC++
Sbjct: 526 SKVVSALSPGAMRLMTDTNGSHVAQRCLKKLLPEYKAFLLDVAALRFLRLAKDQHGCCII 585
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + +EQK L+ + ++A LSE YGNYV+Q+++ L I T+ +V +L G +
Sbjct: 586 QKCIEHSNDEQKYNLLCKITSSALSLSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFG 645
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ KC S+VV+ CL ++ E II+E++ ++ ++ DP+GN+VIQTA +G
Sbjct: 646 YLSMQKCGSHVVENCLKQASELDREMIIHELMADSKLPHIMADPFGNFVIQTALKECKG- 704
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + + ++P LQ+ +Y K VL+K
Sbjct: 705 ELHSSFVEAIRPHAPALQNDVYAKRVLSKT 734
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
+Y L +K Q+ V ++AGR + L+ + +QK E +E I+ EII H
Sbjct: 402 EYDLAMKSTQLNYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKEDFEKILAEIIDH-- 459
Query: 512 IVQLILDPYGNYVIQTAW-DVSQGRRIR 538
+L++DP+GNY++Q + S +R R
Sbjct: 460 FGELMIDPFGNYLVQKLLEECSDDQRTR 487
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 197/311 (63%), Gaps = 12/311 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
YSS+ E +G I L++KD+ GCRFLQK DE P D+++I +E+ID + E M + N+L+
Sbjct: 455 YSSLAEAQGYIYLMSKDQHGCRFLQKMFDEGTPEDVQVIFNEIIDHVVEPMVNPFGNYLM 514
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NEEQ +++L + +L+RI + G+RV+QKL++ TRQQ+ S
Sbjct: 515 QKLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLIET--LKTRQQI-----S 567
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L VSAL+ ++L K +GNHV++RCL + K + A+ C+D+AT + GCC+LQ
Sbjct: 568 LAVSALEPGFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQ 627
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + E + +LIA++ ANA +L++ +GNYVVQ+IL LKIP TA + Q G Y
Sbjct: 628 RCIGHSNGEYQEKLIAEICANALLLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAH 687
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS K S+VV+KCL +E + +I E++ P L+ DP+ NYV+Q+A S+GR
Sbjct: 688 LSRQKFGSHVVEKCLAVFNDENRSRVILELLSMPHFEHLLQDPHANYVVQSALRHSEGR- 746
Query: 537 IRQTLYDLVVD 547
L++L+V+
Sbjct: 747 ----LHNLLVE 753
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 206/333 (61%), Gaps = 11/333 (3%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
+R ++ +A D +GC++LQ K+++ NP D+E ILS V D +H+LM H + N+LI+K+
Sbjct: 90 MRELVLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTHNN-NYLIKKIFQA 148
Query: 303 ---LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQM ++LS++S Q+L +C D G+RVMQ +L +L+ +++V
Sbjct: 149 RSGVTPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLK------NIKLSFTTYNVVV 202
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ IT++L KS +G +VI +CL+ F ++ + +L+++A NC+D+ TD+ GC ++Q C+
Sbjct: 203 CTMHRITLALVKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCL 262
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
L + K+ L+ ++++NA +L+E YGNYV+Q+++ ++ ++ QL G++ S+
Sbjct: 263 SLVEGSVKSLLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSM 322
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+ L S E I+ EI++ + + ++ DP+GNYV Q A ++GR R+
Sbjct: 323 SKHSSNVVEDLLRFSNENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCTKGRLHRE 382
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
L L+ N LQSH+YGK VL ++RF
Sbjct: 383 -LAKLITSNKRILQSHLYGKRVLTMAMTERSRF 414
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 207/330 (62%), Gaps = 10/330 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++E+ GRI +AKD+ GCRFLQ++ DE D++ I E+ID + +LM N+L+QKL
Sbjct: 1 LKEVEGRIYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKL 60
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ V E+Q + IL VV S L+ I ++ G+R +QKL++ + P EQ S++
Sbjct: 61 LEVCTEDQRLE-ILRVVCSGDELISISLNMHGTRAVQKLIETLKSP-------EQVSMIT 112
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S+L+ V L K +GNHV++RCLQ+ + + + + A++C+++ T R GCC+LQ C+
Sbjct: 113 SSLEQGIVILIKDLNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCV 172
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ QK RL+ ++ ANA VLS+ YGNYVVQYIL + P + +V+AQL G + L++
Sbjct: 173 DFSKGVQKERLVGEIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAM 231
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KCL + +++ II+E+ + + QL+ DP+ NYVIQ A V++G +
Sbjct: 232 QKFSSNVVEKCLKQGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKG-ALHA 290
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+L + + + P L+S YGK +L + K
Sbjct: 291 SLVEAIRPHLPALRSSPYGKRILCRTNLKK 320
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 213/350 (60%), Gaps = 22/350 (6%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S+ E +G I ++AKD+ GCRFLQ+ DE P D+++I +E+ID + ELM + N+L+
Sbjct: 325 YNSLVEAQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLM 384
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NEEQ ++++ + L+RI + G+RV+QKL++ TRQQ+++
Sbjct: 385 QKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIET--LKTRQQISR---- 438
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKD-------------LLEEIAENCL 403
++SAL+ ++L K +GNHVI+RCLQ + K+ + A+ C+
Sbjct: 439 -VISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAAAKYCV 497
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
++AT + GCC+LQ CI + E + L+A++ +N ++L++ ++GNYVVQ+IL LKIP T
Sbjct: 498 EIATHQHGCCVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSAT 557
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNY 523
++++AQ G Y LS + SS+VV+KCL EE + I++E++ QL+ P+ NY
Sbjct: 558 SNLIAQFEGNYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANY 617
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFH 573
VIQ A V +G ++ +T + + ++S+M G + +G K FH
Sbjct: 618 VIQKALQVYEG-KLEETCNIYFISSQGCIKSNM-GACAASAPKGLKAEFH 665
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 205/338 (60%), Gaps = 23/338 (6%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
YSS+ E +G I L+AKD+ GCRFLQK DE P D+ MI +E+ID + ELM + N+L+
Sbjct: 127 YSSLAEAQGYIYLMAKDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLM 186
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V NEEQ +++L + +L+RI + G+RV+QKL++ TRQQ+ S
Sbjct: 187 QKLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLVET--LKTRQQI-----S 239
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L VSAL+ ++L K +GNHV++RCL + K + A+ C+D+AT + GCC+LQ
Sbjct: 240 LAVSALEPGFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQ 299
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + E + +LIA++ ANA +L++ +GNYVVQ+IL LKI VT + Q G Y
Sbjct: 300 RCIGHSSGEYREKLIAEICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVH 359
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS K S+VV+KCL +E + +I E++ P L+ DP+ NYV+Q+A S+G
Sbjct: 360 LSRQKFGSHVVEKCLAAFNDENRSRVILELLSTPHFEHLLQDPHANYVVQSALRHSEGH- 418
Query: 537 IRQTLYDLVVD----------NSPFLQSHMYGKNVLAK 564
L++L+V+ NSP+ ++ + +L K
Sbjct: 419 ----LHNLLVEAIESHKAVSRNSPY-SKKIFSQKLLKK 451
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 209/334 (62%), Gaps = 13/334 (3%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+LRGR++L+A D+ CR LQ+ + + + +I E+I+ + +LM N+++Q+++
Sbjct: 181 DLRGRVLLLATDQHECRTLQETMRKLTREEFYIIFLELINHVTDLMVDPFGNYVVQRMVE 240
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ EEQ+++++LS+ +L+RIC G R ++KLL+ + TQEQ+ L++SA
Sbjct: 241 ICTEEQLSQIVLSLAQCNFQLVRICLSAHGIRGVEKLLE-------RVTTQEQRDLVLSA 293
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L L+K +G+ V+ CL++F + ++LL +A C ++ATD++GC +LQ CI
Sbjct: 294 LCPGAAILAKDVNGHRVLLHCLKQFSGEDNENLLNVVANKCFEIATDKTGCVVLQQCINH 353
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
AQ E K +L+ ++ + +L+E YGNYVVQ++L LK+P V ++ QL GR+F L+ K
Sbjct: 354 AQGETKQKLLDAIILHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQLKGRFFYLACNK 413
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR----- 536
SNVV++ L +SGE+ ST I+ E++ +P + L++DPYGNYVI++A S+ +
Sbjct: 414 YGSNVVERFLQDSGEKHSTSIVLELLHNPNVAMLLVDPYGNYVIKSALSASKLLKVELQG 473
Query: 537 -IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+R L L+ NS ++S++YGK +LA K
Sbjct: 474 HVRNRLERLIKLNSLIMRSNLYGKKLLAWFEKGK 507
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 197/330 (59%), Gaps = 7/330 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y+S++E+ G + +AKD+ GCRFLQ+ E + D + + VI+ + ELM N+L
Sbjct: 349 NYNSVDEVVGELYHLAKDQNGCRFLQRIFTEGSQEDAQKVFDGVIEHIDELMIDPFGNYL 408
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQKL+ N+ Q ++ + +L+++ ++ G+RV+QK+++ T ++
Sbjct: 409 IQKLLEQCNDNQKMHILYEITKIPGQLVKVACNMHGTRVVQKVIETVS-------TSDEV 461
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S++VSAL + ++L +G+HV RCLQK P LL + C++LA DR GCC++
Sbjct: 462 SMVVSALSHGAITLMMDANGSHVAHRCLQKLSPKCKAFLLNAATKYCVELAKDRQGCCII 521
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI A +EQK +L+ + A L+EH YGNYV+Q+IL LK+ +++ +L G Y
Sbjct: 522 QKCIIHANKEQKNKLLYSITGRALNLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYG 581
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ KCSSNVV+KCL E+ + II E+I P++ ++LD YGNYVIQTA+
Sbjct: 582 YLSMQKCSSNVVEKCLKEARGPKRAKIILELINDPKLQNILLDQYGNYVIQTAFRECGDA 641
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + L+++M+GK +L+K
Sbjct: 642 AVEAALVRAIKPHISALRNNMFGKRILSKT 671
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 187/299 (62%), Gaps = 8/299 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y S+ E +G I +AKD GCRFLQ+ D D++++ +E I + ELM + N+L
Sbjct: 401 NYCSLAEAQGCIYSLAKDHNGCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYL 460
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL V NE+Q +++L++ L+RI + G+RV+QKL+ TRQQ+
Sbjct: 461 MQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMT--LKTRQQI----- 513
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL+V AL+ + L+K HGNHV++RCL+ + K + A+ C+D+AT R GCC+L
Sbjct: 514 SLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVL 573
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + + +L+A++ AN +L++ +GNYV+QYI+ LKIP A +++Q G Y
Sbjct: 574 QRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEGNYV 633
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS+ K SS+VV+KC L+ EE I++E + P QL+ DP+ NYVIQ+A +V++G
Sbjct: 634 HLSMQKFSSHVVEKC-LKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVTKG 691
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 399 AENCL-DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL 457
A+ C+ LA D +GC LQ A E + + + + L + +GNY++Q + +
Sbjct: 408 AQGCIYSLAKDHNGCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYLMQKLFDV 467
Query: 458 KIPQVTADVVAQLA---GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+V L G +SL + VVQK ++ Q ++ + P +
Sbjct: 468 CNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQISLV-VLALEPYFLD 526
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYD---LVVDNSPFLQSHMYGKNVLAK 564
L D +GN+V+Q + I+ YD VD + +H +G VL +
Sbjct: 527 LTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVD----IATHRHGCCVLQR 575
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++E+L G I + KD+ GCR+LQKK+++RNP + MI E + ELM
Sbjct: 363 NRFANVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFG 422
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+E+ T LI ++ L+RI + G+R +QK++ E+ + T
Sbjct: 423 NYLCQKLLEYCNDEERTVLI---ENASHDLVRIALNQHGTRALQKMI---EFIS----TA 472
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++ AL+ V L + +GNHVI++CL K P + + + + ++C+D+ T R GC
Sbjct: 473 GQVQTIIGALRYRVVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGC 532
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A +QKA LI + NAYVL + +GNYVVQYIL L P T +VA AG
Sbjct: 533 CVLQRCIDHASGDQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAG 592
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
R LS K SSNV++KCL + E +I E+++ ++ L+ D + NYVIQTA D +
Sbjct: 593 RVAQLSKQKFSSNVIEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYA 652
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
++ L + + + P +++ YG+ + AK++GN+NR
Sbjct: 653 N-LNMKTRLIEAIRPHLPAIRTTPYGRRIQAKIQGNENR 690
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++E+L G I + KD+ GCR+LQKK+++RNP + MI E + ELM
Sbjct: 657 NRFANVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFG 716
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+E+ T LI ++ L+RI + G+R +QK++ E+ + T
Sbjct: 717 NYLCQKLLEYCNDEERTVLI---ENASHDLVRIALNQHGTRALQKMI---EFIS----TA 766
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++ AL+ V L + +GNHVI++CL K P + + + + ++C+D+ T R GC
Sbjct: 767 GQVQTIIGALRYRVVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGC 826
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A +QKA LI + NAYVL + +GNYVVQYIL L P T +VA AG
Sbjct: 827 CVLQRCIDHASGDQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAG 886
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
R LS K SSNV++KCL + E +I E+++ ++ L+ D + NYVIQTA D +
Sbjct: 887 RVAQLSKQKFSSNVIEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYA 946
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
++ L + + + P +++ YG+ + AK++GN+NR
Sbjct: 947 N-LNMKTRLIEAIRPHLPAIRTTPYGRRIQAKIQGNENR 984
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 196/333 (58%), Gaps = 11/333 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++E+L G I + KD+ GCR+LQKK+++RNP + MI E + ELM N+L QK
Sbjct: 660 ALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQK 719
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ N+E+ T LI ++ L+RI + G+R +QK+++ P + Q +
Sbjct: 720 LLEYCNDEERTVLI---ENASHDLVRIALNQHGTRALQKMIEFISTPGQVQT-------I 769
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ AL+ V L + +GNHVI++CL K P + + + + ++C+D+ T R GCC+LQ C
Sbjct: 770 IGALRFRVVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRC 829
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I A +QKA LI + NAYVL + +GNYVVQYIL L P T +VA GR LS
Sbjct: 830 IDHASGDQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLS 889
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
K SSNV++KCL + E +I E+++ ++ L+ D + NYVIQTA D + ++
Sbjct: 890 KQKFSSNVIEKCLRCAQEPSKDMLIEEMLQPNQLDSLLRDSFANYVIQTALDYAN-PNMK 948
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + + P +++ YG+ + AK++GN+NR
Sbjct: 949 TRLIEAIRPHLPAIRTTPYGRRIQAKIQGNENR 981
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 203/334 (60%), Gaps = 12/334 (3%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
+ + SIEE+ G+++ VAKD+ GCRFLQ+K DE P I+ +L EV++ L ELM N+
Sbjct: 52 SRFQSIEEVLGQVMAVAKDQNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNY 111
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQKL+ +E+Q +L + ++ L+++ + G+R +QKL++ ++EQ
Sbjct: 112 LIQKLLDRCSEDQRLA-VLKKAAERKELVQVALNTHGTRAVQKLIET-------LTSREQ 163
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+L+ AL+ VSL + +GNHVI+RCLQ+ P+ ++ + + A + +D+AT R GCC+
Sbjct: 164 VALVTDALRGGVVSLIRDLNGNHVIQRCLQRLGPEDSQFVYDAAAAHTMDIATHRHGCCV 223
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI A QK RL+ + ++A LS+ +GNYVVQY+L L + T ++ QL G Y
Sbjct: 224 LQRCIDFATPPQKRRLVDQITSHALPLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHY 283
Query: 475 FALSLGKCSSNVVQKCLLESGE---EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
L+ K SSNVV+KCL G+ E +I E++ P + +L+ DPY NYV+Q+A V
Sbjct: 284 PELAQQKFSSNVVEKCLKLGGQSLAEMRERVIRELLNSPLMPRLLQDPYANYVLQSALSV 343
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
S ++ L D + P L+ +GK +L+K+
Sbjct: 344 SSA-QLHNDLVDAMRPYLPSLRGTPHGKRILSKI 376
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 201/328 (61%), Gaps = 15/328 (4%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G + L+AKD+ GCRFLQ+ DE D +I +EVI + ELM N+L+QKL+
Sbjct: 336 DIQGYVYLMAKDQHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 395
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V EEQ T+++L + +L+RI + G+RV+Q+L++ T +Q SL+ SA
Sbjct: 396 VCTEEQRTQIVLVATAEPGQLIRISLNAYGTRVVQRLVETIR-------TGKQISLVKSA 448
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L+ + L K +GNHVI+RCLQ + K + + + C ++AT R GCC+LQ CI
Sbjct: 449 LRPGFLDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAY 508
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
+ +Q+ +LIA++ N+ +L++ +GNY VQ+++ L+IP A ++AQL G Y LS+ K
Sbjct: 509 SMRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQK 568
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
SS++V++CL+ E + I+ E+I P QL+ DPY N+VIQ A ++G I +L
Sbjct: 569 FSSHMVERCLMHCPESRPQ-IVRELISVPHFDQLLQDPYANFVIQAALAATKG-PIHASL 626
Query: 542 YDL-----VVDNSPFLQSHMYGKNVLAK 564
++ ++ N+P+ + ++ +N+L K
Sbjct: 627 VEVIRPHSILRNNPYCK-RIFSRNLLKK 653
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 203/331 (61%), Gaps = 14/331 (4%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S +S+ E++G+I L+A+D+ GCR+LQ+ DE DI++I +E+ID + ELM N++
Sbjct: 881 SINSLSEVQGKIYLMAQDQNGCRWLQRIFDEGTSQDIQIIFNEIIDHVVELMLKPFGNYV 940
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQK + V NEEQ +++ V +LLRIC + G+R +QKL++ TRQQ+
Sbjct: 941 IQKFLDVCNEEQRLQIVFMVTEEPGQLLRICLNTYGTRAVQKLIET--LKTRQQI----- 993
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S +V AL+ + L K +GNHVI+RCLQ D K + + A+ + +AT R GCC++
Sbjct: 994 SFVVMALRPGFLDLVKDQNGNHVIQRCLQCLHNDDNKFIFDAAAKFSVQIATHRHGCCVM 1053
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + + + +LI ++ NA +L++ +GNYVVQYI+ LK P ++++Q Y
Sbjct: 1054 QRCITHSTGKHREKLITEISKNALLLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYV 1113
Query: 476 ALSLGKCSSNVVQKCL--LESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
LS+ K SS+VV+KCL LE EQ I++E+I QL+ DP+ NYVIQ+A V++
Sbjct: 1114 HLSMQKFSSHVVEKCLKHLEESREQ---IVHELISVSRFEQLLQDPFANYVIQSALAVTK 1170
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
G +R +L V + L+++ Y K + ++
Sbjct: 1171 G-PLRASLVAAVRPHV-ILRTNPYSKRIFSR 1199
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 198/328 (60%), Gaps = 12/328 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+EE+ GRI +AKD+ GCRFLQ K++E NP I MIL+E D L ELM N+L QK
Sbjct: 523 SMEEIVGRIFELAKDQHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQK 582
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L N +Q ++ + S L ++ ++ G+RV+Q++++ E ++Q S +
Sbjct: 583 LFECCNFQQRLSILQNTCSV---LAQVSMNMHGTRVVQRIIECME-------GEDQISTV 632
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+AL L K +GNHVI+RCLQK P + + + + + +C++LAT R GCC++Q C
Sbjct: 633 CTALTPFASQLMKDVNGNHVIQRCLQKVAPTHNQFIFDAVVSHCVELATHRHGCCVIQRC 692
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ A QK ++ ++ NA+ L + ++GNYVVQY+L LK A ++AQLAG + LS
Sbjct: 693 LDYAIPLQKEQVCMEICENAFTLVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELS 752
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDVSQGRRI 537
+ K SSNVV+KCL + E +I E++ E++ +L+ D YGNYV+Q A ++Q ++
Sbjct: 753 VQKFSSNVVEKCLQQVDPETRKHLIYELMSDRELLGRLLHDAYGNYVVQRALQLAQSPQL 812
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q +++ + L+S YGK + +K+
Sbjct: 813 EQ-FCEIIRPHLSSLKSTPYGKRIYSKI 839
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ +D G +Q +D +N I I++++ L+EL + ++++++K + ++ E
Sbjct: 715 LVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKCLQQVDPETRK 774
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
LI ++S ++ L R+ D G+ V+Q+ L + P +Q + ++ SL
Sbjct: 775 HLIYELMSDRELLGRLLHDAYGNYVVQRALQLAQSPQLEQFCE--------IIRPHLSSL 826
Query: 370 SKSPHGNHVIKRCLQKFP 387
+P+G + + +++FP
Sbjct: 827 KSTPYGKRIYSKIVRRFP 844
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++E+L G I + KD+ GCR+LQKK+++RNP + MI E + ELM
Sbjct: 193 NRFANLALEQLGGEIYNLCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFG 252
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+E+ T LI ++ L+RI + G+R +QK+++ T+
Sbjct: 253 NYLCQKLLEYCNDEERTVLI---ENASHDLVRIALNQHGTRALQKMIEFIS-------TE 302
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++++ +LKN V L + +GNHVI++CL + ++ + + + +C+D+ T R GC
Sbjct: 303 TQINIIIRSLKNRVVELIQDLNGNHVIQKCLNRLTAQQSQFIFDAVGIHCIDVGTHRHGC 362
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A +QK+ LI + NAYVL + +GNYVVQYIL L P T +VA G
Sbjct: 363 CVLQRCIDHASGDQKSWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQG 422
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
R LS K SSNV++KCL + E +I E+++ E+ +L+ D + NYVIQTA D +
Sbjct: 423 RVGQLSKQKFSSNVIEKCLRCAKEPSKDMLIEEMLQPTELDRLLRDSFANYVIQTALDYA 482
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
++ L + + + P +++ YG+ + AK++GN+ R
Sbjct: 483 -NPAMKTRLIEAIRPHLPAIRTTPYGRRIQAKIQGNEGR 520
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 192/332 (57%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E L G I + KD+ GCR+LQKK+++RNP + MI E + ELM N+L QKL
Sbjct: 626 LESLGGEIYALCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKL 685
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI ++ L+RI + G+R +QK+++ P + Q ++
Sbjct: 686 LEFCNDDERTVLI---ENASHDLVRIALNQHGTRALQKMIEFISTPGQIQT-------II 735
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL++ V L + +GNHVI++CL K + + + + +C+D+ T R GCC+LQ CI
Sbjct: 736 EALRHRVVELIQDLNGNHVIQKCLNKLSSTDAQFIFDAVGTHCVDVGTHRHGCCVLQRCI 795
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQKA LI + NAYVL + +GNYVVQYIL L P T +VA GR LS
Sbjct: 796 DHASGEQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSK 855
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + E +I E+++ E+ +L+ D + NYVIQTA D + ++
Sbjct: 856 QKFSSNVIEKCLRCAQEPSKDMLIEEMLQPAELDRLLRDSFANYVIQTALDYAN-PNMKA 914
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK++GN+ R
Sbjct: 915 RLIEAIRPYLPAIRTTPYGRRIQAKIQGNEGR 946
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 197/355 (55%), Gaps = 25/355 (7%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR+NN +E++ G I + KD+ GCR+LQKK+D+RN I MI
Sbjct: 254 AMSRFNNL--------------PLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIW 299
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E + ELM N+L QKL+ + +E++ T LI + S ++RI + G+R +Q
Sbjct: 300 LETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIRNATSD---MVRIALNAHGTRALQ 356
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K++D+ P Q +L++ AL+N V L + +GNHVI++CL K + +
Sbjct: 357 KMIDSVSSPA-------QINLIIEALRNRVVELIQDLNGNHVIQKCLNKLNATDASFIFD 409
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ +NC+++ T R GCC+LQ CI A +K LI + ANA L + +GNYVVQYI+
Sbjct: 410 AVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITANAVTLVQDPFGNYVVQYIID 469
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L P T +V Q GR LS K SSNVV+KCL + I++EI+ EI QL+
Sbjct: 470 LNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASPNSKDRIVSEIMSQNEIKQLM 529
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
D YGNYV+QTA D + ++ L + + + P +++ YG+ + AK++ N+
Sbjct: 530 QDSYGNYVVQTALDYAT-PSMKHQLVEAIRPHLPAVRATPYGRRIQAKIQTYDNQ 583
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 197/355 (55%), Gaps = 25/355 (7%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR+NN +E++ G I + KD+ GCR+LQKK+D+RN I MI
Sbjct: 255 AMSRFNNL--------------PLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIW 300
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E + ELM N+L QKL+ + +E++ T LI + S ++RI + G+R +Q
Sbjct: 301 LETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIRNATSD---MVRIALNAHGTRALQ 357
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K++D+ P Q +L++ AL+N V L + +GNHVI++CL K + +
Sbjct: 358 KMIDSVSSPA-------QINLIIEALRNRVVELIQDLNGNHVIQKCLNKLNATDASFIFD 410
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ +NC+++ T R GCC+LQ CI A +K LI + ANA L + +GNYVVQYI+
Sbjct: 411 AVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITANAVTLVQDPFGNYVVQYIID 470
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L P T +V Q GR LS K SSNVV+KCL + I++EI+ EI QL+
Sbjct: 471 LNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASPNSKDRIVSEIMSQNEIKQLM 530
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
D YGNYV+QTA D + ++ L + + + P +++ YG+ + AK++ N+
Sbjct: 531 QDSYGNYVVQTALDYAT-PSMKHQLVEAIRPHLPAVRATPYGRRIQAKIQTYDNQ 584
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 200/340 (58%), Gaps = 14/340 (4%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ S+EE G++ ++A+D+ GCRFLQ+K DE + + E+I ++ +LM N+L+
Sbjct: 5 FGSVEECVGQVGVLARDQHGCRFLQRKFDEEGEEAVNLCFEEIIAEVVDLMMDPFGNYLV 64
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQ---RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
QKL+ +EQ ++ +V L+ + + G+R +QKL++ P E
Sbjct: 65 QKLLECCTDEQRMGVLRAVAKDGDGVPELVSVALNTHGTRAVQKLVETLRTP-------E 117
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +L ALK V+L K +GNHVI+RCLQ+ + + + + + C+++AT R GCC
Sbjct: 118 QVALATEALKPGVVTLIKDLNGNHVIQRCLQRLGAEDNQFVYDAARKCCVEIATHRHGCC 177
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A + Q+ L+ ++ A A VLS+ +GNYVVQYIL L +P A+V+ +LAG
Sbjct: 178 VLQRCIDHAADGQRRALVQEIAAQALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGN 237
Query: 474 YFALSLGKCSSNVVQKCLL---ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
Y LS+ K SSNVV+KCL S EE ++ EI+ P + +L++DPYGNYV+Q+
Sbjct: 238 YAELSMQKFSSNVVEKCLKLADASLEEHRNVVVREIMTSPLLDRLLMDPYGNYVVQSTLS 297
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKN 570
V++G + L D + + P +++ +GK +L + NK
Sbjct: 298 VTKG-ALHSELVDRIRPHLPLIKNSPFGKRILRLLLENKK 336
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 194/328 (59%), Gaps = 9/328 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y S+ LRG + +A+D+ GCRFLQ+++D+ +++ I + V ELM + N+L+
Sbjct: 197 YESLAGLRGFMYHIARDQHGCRFLQQRLDD-GKREVDFIFAGVARHAVELMVNPFGNYLM 255
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V ++EQ ++L++ L+RI ++ G+R +QKL+++ T+E+
Sbjct: 256 QKLLAVCDDEQRMAIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLR-------TREEIQ 308
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L+V AL+ + L K P+GNHV++RCLQ F + K + E A +CLD+ GCC+LQ
Sbjct: 309 LVVQALRPGFLELIKDPNGNHVVQRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQ 368
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + EQ+ +L+A + +N + L++ +YGNYVVQY++ LK+P A + Q GRY
Sbjct: 369 RCIARSGGEQREKLVAAIASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIH 428
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS+ K SSNVV+KCL E II E++ P QL+ P+ NYVI +A S+G
Sbjct: 429 LSMQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKG-S 487
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ L + + + L++ Y K + ++
Sbjct: 488 LHSALTNAIRPHVELLRTSPYCKRIYSR 515
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 196/356 (55%), Gaps = 25/356 (7%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR+NN +E++ G I + KD+ GCR+LQKK+D+RN I MI
Sbjct: 231 AMSRFNNL--------------PLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIW 276
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E + ELM N+L QKL+ + +E++ T LI + ++RI + G+R +Q
Sbjct: 277 LETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIRNATPD---MVRIALNAHGTRALQ 333
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K++D+ P Q +L++ AL+N V L + +GNHVI++CL K + +
Sbjct: 334 KMIDSVSSPV-------QINLIIEALRNRVVELIQDLNGNHVIQKCLNKLDATDASFIFD 386
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ +NC+++ T R GCC+LQ CI A +K LI + ANA L + +GNYVVQYI+
Sbjct: 387 AVGQNCVEVGTHRHGCCVLQRCIDHADGSKKIWLIERITANAVTLVQDPFGNYVVQYIID 446
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L P T +V Q GR LS K SSNVV+KCL + I++EI+ EI QL+
Sbjct: 447 LNEPSFTEPLVRQFLGRIPQLSKHKFSSNVVEKCLRCASPNSKDMIVSEIMSQNEIKQLM 506
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
D YGNYV+QTA D + ++ L + + + P +++ YG+ + AKV+ N+
Sbjct: 507 QDSYGNYVVQTALDYAT-PGMKHQLVEAIRPHLPAVRATPYGRRIQAKVQTYDNQI 561
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 219/380 (57%), Gaps = 20/380 (5%)
Query: 195 PSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRT-----SYSSIEELRGRIIL 249
P S S F SD + + + +N A ++ + T S ++ +++G + L
Sbjct: 281 PMVSKCSEPFSSDESFFMNGKSIDHQRSNTRALMSNNGNPTEICHPSLPNMCDIQGYVYL 340
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+AKD+ GCRFLQ+ DE +D +I +EVI + ELM N+L+QKL+ V EEQ T
Sbjct: 341 MAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRT 400
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
+++L +L+RI + G+RV+Q+L++ + +Q SL+ AL+ + L
Sbjct: 401 QIVLVATEEPGQLIRISLNAYGTRVVQRLVETIR-------SGKQISLVKLALRPGFLDL 453
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR 429
K +GNHVI+RCLQ + K + + + C ++AT R GCC+LQ CI + +Q+ +
Sbjct: 454 IKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREK 513
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
LIA++ N+ +L++ +GNY VQ+++ L+IP A ++AQL G Y LS+ K SS++V++
Sbjct: 514 LIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVER 573
Query: 490 CLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL----- 544
CL+ E + I+ E++ P QL+ DPY N+VIQ A ++G + +L ++
Sbjct: 574 CLMHCPESRPQ-IVRELVSVPHFDQLLQDPYANFVIQAALAATKG-PLHASLVEVIRPHS 631
Query: 545 VVDNSPFLQSHMYGKNVLAK 564
++ N+P+ + ++ +N+L K
Sbjct: 632 ILRNNPYCK-RIFSRNLLKK 650
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 196/332 (59%), Gaps = 13/332 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y+S+E+L G I + +D+ GCRFLQKK++E +P E+I EV D + ELM N+L
Sbjct: 595 AYTSVEQLVGSIYPLCRDQHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYL 654
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
QKL+ N++Q +I V + ++RI ++ G+R +QK++ EY T T EQ
Sbjct: 655 CQKLLEHCNDQQRLTIIEKVGTD---IVRISMNMHGTRAVQKMI---EYLT----TPEQI 704
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCC 413
L+ +LK+ V L + +GNHVI++CL K P + + + ++ NC+ +AT R GCC
Sbjct: 705 ELIKRSLKDSVVQLIQDLNGNHVIQKCLNKLSPQDNQFIYDSVSSDGNCVAVATHRHGCC 764
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A E QK +LI +V+AN+ VL + YGNYVVQY+L L + ++ + G
Sbjct: 765 VLQRCIDHASESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGH 824
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
L+ K SSNVV+KCL + +I E+I + ++ L+ DPY NYVIQT+ +S+
Sbjct: 825 VPILATQKFSSNVVEKCLHVADATTRGNLIQEVIDYDNLLYLLQDPYANYVIQTSLSISE 884
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + P L++ YGK + K+
Sbjct: 885 PHQ-HTKLVEAIRPHLPLLKNTPYGKRIQNKI 915
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 202/329 (61%), Gaps = 10/329 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S + E +G + +AKD+ GCRFLQ ++ + +D +I SEVI + ELM N+L
Sbjct: 192 SLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYL 251
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V NEEQ T++IL V S +L+RI + G+RV+Q+L+++ + T++Q
Sbjct: 252 MQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIK-------TRKQI 304
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL+ SAL+ ++L + +GNHVI+RCLQ + + + E+ + C+D+AT R GCC+L
Sbjct: 305 SLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVL 364
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + Q+ +L+ ++ N+ L++ YGNY VQ++L L+ A ++AQL G Y
Sbjct: 365 QKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYV 424
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SS++V++CL E + I+ E+I P LI DPY N+VIQ A V++G
Sbjct: 425 ELSMQKFSSHMVERCLTHCPESRPQ-IVRELISVPHFDILIQDPYANFVIQAALAVTKG- 482
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ TL +++ +S L+++ Y K + ++
Sbjct: 483 SLHATLVEVIRPHS-ILRNNPYCKRIFSR 510
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 202/329 (61%), Gaps = 10/329 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S + E +G + +AKD+ GCRFLQ ++ + +D +I SEVI + ELM N+L
Sbjct: 191 SLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYL 250
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V NEEQ T++IL V S +L+RI + G+RV+Q+L+++ + T++Q
Sbjct: 251 MQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIK-------TRKQI 303
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL+ SAL+ ++L + +GNHVI+RCLQ + + + E+ + C+D+AT R GCC+L
Sbjct: 304 SLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVL 363
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + Q+ +L+ ++ N+ L++ YGNY VQ++L L+ A ++AQL G Y
Sbjct: 364 QKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYV 423
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SS++V++CL E + I+ E+I P LI DPY N+VIQ A V++G
Sbjct: 424 ELSMQKFSSHMVERCLTHCPESRPQ-IVRELISVPHFDILIQDPYANFVIQAALAVTKG- 481
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ TL +++ +S L+++ Y K + ++
Sbjct: 482 SLHATLVEVIRPHS-ILRNNPYCKRIFSR 509
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 217/381 (56%), Gaps = 28/381 (7%)
Query: 202 HGFLSDH---HHLGSSTNASSRYNNFYARARH---------HHHRTSYS---SIEELRGR 246
+GF++D+ + S+ + +FY R RH H H +YS + RG
Sbjct: 50 YGFINDNPTMEEIYSAMGGLFTHLDFY-RMRHRASVEAALPHPHTDNYSNHFASPPWRGF 108
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV---L 303
++ +A + + C++LQ +DE NP+ + MIL EV D LHELM H+ ++LIQK+ +
Sbjct: 109 VVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGM 168
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
+QM + ++S+ ++L +C D G+R MQ ++ +P ++V L+
Sbjct: 169 TCQQMDLTVFLIISNHRKLKDVCMDHHGTRAMQTMIANVRHPF-------TGYVVVYMLQ 221
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
+IT+ L K+ +G++VI +C++ FPP + K +L+E+A NC+D+ATD+ GC ++ C+
Sbjct: 222 HITIPLMKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGG 281
Query: 424 EEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
L+A +++NA +LSE YGNYVVQ ++ +KIP +V +L ++ LS+ K
Sbjct: 282 RTSAIDILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKY 341
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
+SNVV+ L S ++ I EI+R + ++ DPYGNYV Q A ++G +R+
Sbjct: 342 ASNVVEYLLSFSNQDAVKVIAEEIMRSRNFLNVLHDPYGNYVAQRALRCTKG-HVRRRFS 400
Query: 543 DLVVDNSPFLQSHMYGKNVLA 563
L+ + LQSH+YGKNVL
Sbjct: 401 SLIKSHRLALQSHIYGKNVLT 421
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 196/340 (57%), Gaps = 12/340 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++E L G I + KD+ GCRFLQKK++ERN I MI E + ELM
Sbjct: 617 NRFANVALESLGGEIYSLCKDQHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFG 676
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+E+ T LI ++ Q LLRI + G+R +QK++ E+ + T
Sbjct: 677 NYLCQKLLEFCNDEERTVLI---ENASQDLLRIALNQHGTRALQKMI---EFIS----TA 726
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++ AL+ V L + +GNHVI++CL K P + + + + +C+D+ T R GC
Sbjct: 727 GQIQTIIEALRYQVVELIQDLNGNHVIQKCLNKLSPLDAQFIFDAVGRHCVDVGTHRHGC 786
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A +QKA LI + NA+ L + +GNYVVQYIL L P T +VA AG
Sbjct: 787 CVLQRCIDHASGDQKAWLIRQISNNAFTLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAG 846
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP-EIVQLILDPYGNYVIQTAWDV 531
R LS K SSNV++KCL + E +I E++ P ++ +L+ D + NYV+QTA D
Sbjct: 847 RVGQLSRQKFSSNVIEKCLRCAQEPSKDMLIEEMLATPADLERLLRDSFANYVVQTALDY 906
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ ++ L D + P +++ YG+ + AK++G + R
Sbjct: 907 AN-PAMKTRLIDAIRPILPQIRTTPYGRRIQAKLQGAEGR 945
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 179/298 (60%), Gaps = 8/298 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y ++ ++G I +AKD+ GCRFLQ+K +E ++ I +I+ + ELM + AN+L+
Sbjct: 363 YENMVGVKGYIYFMAKDQNGCRFLQQKFEEGKQ-HVDAIFEGIINHIAELMTNSFANYLV 421
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V +EEQ ++I + +LLRI + G+R +QKL++ R+Q+
Sbjct: 422 QKLLDVCDEEQRLRIIAVLTEDPVKLLRISLNTHGTRAVQKLIET--VKIRKQIV----- 474
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L++SA++ + L +GNHVI++CL F + K + E A +C ++A R GCC+LQ
Sbjct: 475 LIISAIQPGFMHLVNDLNGNHVIQKCLTNFGVEENKFIFEAAAAHCFEMAIHRHGCCVLQ 534
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A+ E +A+LI +V A+A+ L++ +GNYVVQY+L KIP A + AQ G Y
Sbjct: 535 KCITSARGEYQAKLIVEVCAHAFQLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVY 594
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS K SSNVV+KCL +E I+ ++I QL+ DP+ NYVI TA S+G
Sbjct: 595 LSKQKVSSNVVEKCLKVFSDEDKAAIVFDLISVTHFEQLLQDPFANYVIHTALVNSRG 652
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 204/343 (59%), Gaps = 18/343 (5%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ S+E G+I ++A+D+ GCRFLQ+K DE +++ E+I + ELM N+L+
Sbjct: 5 FVSVENCVGQISVLARDQHGCRFLQRKFDEEGSKAVDLCYDEIIAEAVELMMDPFGNYLV 64
Query: 297 QKLIGVLNEEQMTKLI--LSVVSSQQ-----RLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
QKLI ++EQ + ++ +SVV + L+ I + G+R +QKL++ P
Sbjct: 65 QKLIECCSDEQRSGVLRAVSVVKADNPDGLPELVTIALNTHGTRAVQKLIEMLNSP---- 120
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
E+ SL +AL+ V+L K +GNHVI+RCLQ+ D + + + +C+++AT R
Sbjct: 121 ---EEVSLATTALRPGVVTLIKDLNGNHVIQRCLQRLSCDDNQFIYDAAKVHCVEIATHR 177
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GCC+LQ CI A EEQ+ L+ ++ + A VLS+ +GNYVVQYIL L + +V+ Q
Sbjct: 178 HGCCVLQRCIDHATEEQRRPLVHEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQ 237
Query: 470 LAGRYFALSLGKCSSNVVQKCLL---ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
L G Y LS+ K SSNVV+KCL S E+ ++ EI++ P + +L++DPYGNYV+Q
Sbjct: 238 LLGNYAELSMQKFSSNVVEKCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQ 297
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+ V++G + L + + + P +++ +GK +L + NK
Sbjct: 298 STLTVTKG-VLHTELVERIRPHLPLIKNSPFGKRILRLLLENK 339
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 202/329 (61%), Gaps = 10/329 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S + E +G + L+AKD+ GCRFLQ+ ++ + +D +I +EVI + ELM N+L
Sbjct: 202 SLPKVSEFQGYVYLMAKDQHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYL 261
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V NEEQ T++IL V S +L+RI + G+RV+Q+L+++ + T++Q
Sbjct: 262 MQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIK-------TRKQI 314
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL+ AL+ ++L + +GNHVI+RCL+ + + E+ + C+D+AT R GCC+L
Sbjct: 315 SLVKLALRPGFLNLIRDLNGNHVIQRCLKCLSTKDNEFIFEDATKFCIDIATHRHGCCVL 374
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + Q+ +L+ ++ N+ L++ YGNY VQ++L L+ A ++AQL G Y
Sbjct: 375 QKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYV 434
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SS++V++CL E + I+ E+I P LI DPY N+VIQ A V++G
Sbjct: 435 ELSMQKFSSHMVERCLTHCPESRPQ-IVRELISVPHFDILIQDPYANFVIQAALAVTKG- 492
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ TL +++ +S L+++ Y K + ++
Sbjct: 493 SLHATLVEVIRPHS-ILRNNPYCKRIFSR 520
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 214/410 (52%), Gaps = 42/410 (10%)
Query: 186 RYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFY---ARARHHHHRTSYSS--- 239
R+ T N S +N + ++ H +A ++ +F+ + R H R S
Sbjct: 498 RFPTYNQMS--IANKIYAVPTNQFHGLGQVSAPAKTTDFFHPTSPGRGHSRRGFESDGNR 555
Query: 240 -----IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
IE L I L+ KD+ GCRFLQ+K++E+NP DIE+I E + ELM N+
Sbjct: 556 FSNLDIEALGNEIYLLCKDQHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNY 615
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
L QKL+ N EQ +KL V ++ L+ I + G+R +QK+++ P +Q
Sbjct: 616 LCQKLLEHTNNEQRSKL---VNNAAPHLVEIALNQHGTRALQKMIEFLSTP-------DQ 665
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+++AL+ V L + +GNHVI++CL + P+ + + + + +N + + T R GCC+
Sbjct: 666 IQTVINALRGKVVELIQDLNGNHVIQKCLNRLKPEDAQFIFDAVGKNSVTVGTHRHGCCV 725
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI A Q+A+LIA + NA+ L +GNYVVQYIL L P++ ++ + GR
Sbjct: 726 LQRCIDHASTPQRAQLIAHITENAFALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRI 785
Query: 475 FALSLGKCSSNVVQK------------------CLLESGEEQSTGIINEIIRHPEIVQLI 516
LS+ K SSNV++K C+ S +E ++ EI+ PE+ +LI
Sbjct: 786 IELSMQKFSSNVIEKVCPFQIQRPIPSGLTLAQCIRVSSKETRALMVKEIVNPPELEKLI 845
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D Y NYVIQTA D ++ R L D + P ++ YG+ + +K++
Sbjct: 846 RDSYANYVIQTALDYAEADS-RTMLVDNLRPIMPSIRMTPYGRRIQSKIQ 894
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 199/344 (57%), Gaps = 13/344 (3%)
Query: 195 PSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRT-----SYSSIEELRGRIIL 249
P S S F SD + + + +N A ++ + T S ++ +++G + L
Sbjct: 281 PMVSKCSEPFSSDESFFMNGKSIDHQRSNTRALMSNNGNPTEICHPSLPNMCDIQGYVYL 340
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+AKD+ GCRFLQ+ DE +D +I +EVI + ELM N+L+QKL+ V EEQ T
Sbjct: 341 MAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRT 400
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
+++L +L+RI + G+RV+Q+L++ + +Q SL+ AL+ + L
Sbjct: 401 QIVLVATEEPGQLIRISLNAYGTRVVQRLVETIR-------SGKQISLVKLALRPGFLDL 453
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR 429
K +GNHVI+RCLQ + K + + + C ++AT R GCC+LQ CI + +Q+ +
Sbjct: 454 IKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREK 513
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
LIA++ N+ +L++ +GNY VQ+++ L+IP A ++AQL G Y LS+ K SS++V++
Sbjct: 514 LIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVER 573
Query: 490 CLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
CL+ E + I+ E++ P QL+ DPY N+VIQ A ++
Sbjct: 574 CLMHCPESRPQ-IVRELVSVPHFDQLLQDPYANFVIQAALAATK 616
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 184/310 (59%), Gaps = 9/310 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y ++ +G I +AKD+ GCRFLQ+K +E ++I +ID + ELM + AN+L+
Sbjct: 386 YENMVGAKGYIYFMAKDQNGCRFLQQKFEEGKD-QADLIFEGIIDHIPELMANSFANYLV 444
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V +EEQ ++I + +LLR+ + G+R +QKL++ + TR+Q+
Sbjct: 445 QKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVK--TRKQIM----- 497
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L++SAL+ + L P+GNHVI++CL+ F + K + E A +C+++A +R GCC+LQ
Sbjct: 498 LIISALQPGFIHLVNDPNGNHVIQKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQ 557
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A E + +LI + A+ L++ +GNYV+QY+L LKIP A + + G Y
Sbjct: 558 SCISNAYGEYQIKLIMQICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVY 617
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS K SNVV+KCL ++ II E+I QL+ DPY NYVI TA ++G
Sbjct: 618 LSKQKVGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALVQTRG-H 676
Query: 537 IRQTLYDLVV 546
+R L + ++
Sbjct: 677 LRSALVNAIL 686
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 193/329 (58%), Gaps = 11/329 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y++IE+ G+I + KD+ GCRFLQ+K++E+N I++I EV + + ELM N+L
Sbjct: 769 YTTIEQAAGKIYSLCKDQIGCRFLQRKIEEQNESVIQIIFDEVFEHVGELMTDPFGNYLC 828
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ E Q T ++ V L+ I ++ G+R +QKL + + + Q
Sbjct: 829 QKLLEHCTEAQRTAIVQRVAP---ELVSISLNMHGTRAVQKLTECLK-------ERGQIE 878
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L++SA ++ V+L K +GNHVI+RCLQ+F + + + +A NC+ +AT R GCC++Q
Sbjct: 879 LVISAFRDAVVTLIKDLNGNHVIQRCLQRFSAADNQFIYDAVASNCVQVATHRHGCCVMQ 938
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A E QK +L+ +V + L + +GNYVVQY+L L IP+ + +V Q G
Sbjct: 939 RCIDNATEAQKHQLVNEVTFHVLNLVQDPFGNYVVQYVLDLNIPRFSDALVNQFLGNICP 998
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
L++ K SSNV++KCL S T ++ E++ + +L+ DP+GNYVIQTA + ++
Sbjct: 999 LAIQKFSSNVIEKCLRASEPATRTTMMLELLDERWLPRLLQDPFGNYVIQTALGIGDAQQ 1058
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + + + ++ YGK + AK+
Sbjct: 1059 LN-IMVEGIRPHFNLIRHTPYGKKIEAKL 1086
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 195/355 (54%), Gaps = 25/355 (7%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
+N SR+ NF +E RG + + KD+ GCR+LQ+K++ERNP +++
Sbjct: 632 SNQLSRFTNF--------------PLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQL 677
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
I E + ELM N+L QKL+ N+EQ T LI + + +L++I + G+R
Sbjct: 678 IFDETNMHVVELMTDPFGNYLCQKLLEFSNDEQRTALINNAAN---QLVKIALNQHGTRA 734
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK+++ P EQ ++ AL++ V L + +GNHVI++CL + + + +
Sbjct: 735 LQKMIEFISTP-------EQIQTVIQALRDHVVELVQDLNGNHVIQKCLNRLSAEDAQFI 787
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + NC+ + T R GCC+LQ CI A EQ+ARLIA + ANA+ L + +GNYVVQYI
Sbjct: 788 YDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAFALVQDPFGNYVVQYI 847
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L L P T + G ALS K SSNV++KCL + + +I+E++ E+ +
Sbjct: 848 LDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMRRQMIDEMLAGTELEK 907
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
++ D + NYV+QTA D + R + D + P ++ +G+ + K+ ++
Sbjct: 908 MLRDSFANYVVQTAMDFAD-PETRARIVDAIRPILPSIRQTPHGRRIAGKMMASE 961
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 195/355 (54%), Gaps = 25/355 (7%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
+N SR+ NF +E RG + + KD+ GCR+LQ+K++ERNP +++
Sbjct: 632 SNQLSRFTNF--------------PLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQL 677
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
I E + ELM N+L QKL+ N+EQ T LI + + +L++I + G+R
Sbjct: 678 IFDETNMHVVELMTDPFGNYLCQKLLEFSNDEQRTALINNAAN---QLVKIALNQHGTRA 734
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK+++ P EQ ++ AL++ V L + +GNHVI++CL + + + +
Sbjct: 735 LQKMIEFISTP-------EQIQTVIQALRDHVVELVQDLNGNHVIQKCLNRLSAEDAQFI 787
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + NC+ + T R GCC+LQ CI A EQ+ARLIA + ANA+ L + +GNYVVQYI
Sbjct: 788 YDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAFALVQDPFGNYVVQYI 847
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L L P T + G ALS K SSNV++KCL + + +I+E++ E+ +
Sbjct: 848 LDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMRRQMIDEMLAGTELEK 907
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
++ D + NYV+QTA D + R + D + P ++ +G+ + K+ ++
Sbjct: 908 MLRDSFANYVVQTAMDFAD-PETRARIVDAIRPILPSIRQTPHGRRIAGKMMASE 961
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 183/326 (56%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 584 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 643
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK+++ P EQ ++
Sbjct: 644 LEYSNDEQRTALINNAA---HQLVKIALNQHGTRALQKMIEFISTP-------EQTQTVI 693
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 694 HALEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 753
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 754 DHASGEQRARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSK 813
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I E++ E+ +++ D + NYV+QTA D + R
Sbjct: 814 QKFSSNVIEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADS-ETRT 872
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L D + P ++ +G+ + K+
Sbjct: 873 RLIDAIRPILPSIRQTPHGRRIAGKM 898
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 183/326 (56%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 584 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 643
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK+++ P EQ ++
Sbjct: 644 LEYSNDEQRTALINNAA---HQLVKIALNQHGTRALQKMIEFISTP-------EQTQTVI 693
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 694 HALEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 753
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 754 DHASGEQRARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSK 813
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I E++ E+ +++ D + NYV+QTA D + R
Sbjct: 814 QKFSSNVIEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADS-ETRT 872
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L D + P ++ +G+ + K+
Sbjct: 873 RLIDAIRPILPSIRQTPHGRRIAGKM 898
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 191/351 (54%), Gaps = 25/351 (7%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
+N SR+ NF +E RG + + KD+ GCR+LQ+K++ERNP ++
Sbjct: 626 SNQLSRFTNF--------------PLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQF 671
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
I E + ELM N+L QKL+ N+EQ T LI + +L++I + G+R
Sbjct: 672 IFDETNMHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNAA---HQLVKIALNQHGTRA 728
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK+++ P EQ ++ AL++ V L + +GNHVI++CL + + + +
Sbjct: 729 LQKMIEFISTP-------EQIQTVIQALRDHVVELVQDLNGNHVIQKCLNRLSAEDAQFI 781
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + NC+ + T R GCC+LQ CI A EQ+ARLIA + ANA+ L + +GNYVVQYI
Sbjct: 782 YDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAFALVQDPFGNYVVQYI 841
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L L P T + G ALS K SSNV++KCL + + +I+E++ E+ +
Sbjct: 842 LDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMRRQMIDEMLAGAELEK 901
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ D + NYV+QTA D + R + D + P ++ +G+ + K+
Sbjct: 902 MLRDSFANYVVQTAMDFAD-PETRARIVDAIRPILPSIRQTPHGRRIAGKM 951
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 183/326 (56%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 503 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 562
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK+++ P EQ ++
Sbjct: 563 LEYSNDEQRTALINNAA---HQLVKIALNQHGTRALQKMIEFISTP-------EQTQTVI 612
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 613 HALEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 672
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 673 DHASGEQRARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSK 732
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I E++ E+ +++ D + NYV+QTA D + R
Sbjct: 733 QKFSSNVIEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADS-ETRT 791
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L D + P ++ +G+ + K+
Sbjct: 792 RLIDAIRPILPSIRQTPHGRRIAGKM 817
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 239/471 (50%), Gaps = 49/471 (10%)
Query: 96 PESGLSRPSQFAAPRPPLSQYLPYPIPLNQAQYSFINSLPTSFPLENHETIDLQSGFDLQ 155
P+S LS+P+ A PP L N +N+ P F G+ +Q
Sbjct: 475 PQSTLSQPTTLQASAPPFGPQLTTGTAPNNVGAPAVNTFPPPF-----------YGYGIQ 523
Query: 156 SGFEGLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGF-LSDHHHLGSS 214
G P P N +Q N +A Y A P Y+ GF L++ G +
Sbjct: 524 -----------GYPVPVNGQLQ-NFNSAAASYG----AYPPYA----GFRLAE----GQA 559
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
+A+ R N ++ R + +E RG + + KD+ GCR+LQ+K++ER+P +++
Sbjct: 560 KSAAPRRNGDTESSQLS--RFTNFPLEHYRGELYSLCKDQHGCRYLQRKLEERDPEHVQL 617
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
I E + ELM N+L QKL+ N++Q T LI + +L++I + G+R
Sbjct: 618 IFDETHLHVVELMTDPFGNYLCQKLLEYSNDDQRTALINNAA---HQLVKIALNQHGTRA 674
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK++ E+ + T EQ ++ AL++ V L + +GNHVI++CL + + + +
Sbjct: 675 LQKMI---EFIS----TAEQTQTVIQALRDHVVELVQDLNGNHVIQKCLNRLSAEDAQFI 727
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + NC+ + T R GCC+LQ CI A EQ+ARLIA + +NA+ L + +GNYVVQYI
Sbjct: 728 YDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFALVQDPFGNYVVQYI 787
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L L P T + G ALS K SSNV++KCL + + +I+E++ E+ +
Sbjct: 788 LDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCLRTADFQIKRQMIDEMLVGVELEK 847
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ D + NYV+QTA D + R + D + P ++ +G+ + K+
Sbjct: 848 MLRDSFANYVVQTAMDFAD-PETRGRIVDAIRPILPSIRQTPHGRRIAGKM 897
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 193/330 (58%), Gaps = 9/330 (2%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
+ Y S+ LRG + VA+D+ GCRFLQ+++D+ +++ I + V +LM + N+
Sbjct: 159 SKYESLVGLRGYMYHVARDQHGCRFLQQRLDD-GKREVDFIFTGVARHAVDLMVNPFGNY 217
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
L+QKL+ V +EEQ ++L++ L+RI ++ G+R +QKL+++ + +E+
Sbjct: 218 LMQKLLAVCSEEQRMGIVLTLTKEPFVLVRISLNVHGTRAVQKLIESLK-------AREE 270
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
L+V+AL+ + L K P+GNHV+++CLQ F D K + + A CLD+ GCC+
Sbjct: 271 IQLVVAALRPGFLELIKDPNGNHVVQKCLQSFGADDNKPIFDAAAIYCLDIGMQCHGCCV 330
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI + E K +L+A + N + L++ +YGNYVVQY++ LK+ A + Q G+Y
Sbjct: 331 LQRCIARSTGEHKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKY 390
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS+ K SSNVV+KCL E II +++ P+ +L+L PY NYV+ A S+G
Sbjct: 391 IHLSMQKFSSNVVEKCLKVFKEADKANIILQLLAAPQFERLLLHPYANYVVYAALQNSKG 450
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ L + + + L++ Y K + ++
Sbjct: 451 -SLHSALTNAIRPHVELLRTSPYCKRIYSR 479
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 193/334 (57%), Gaps = 11/334 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E + HELM
Sbjct: 522 NRFAGTRLEDLQGEIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFG 581
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q+
Sbjct: 582 NYLCQKLLEFATDEQRNLICESVA---QELVNISLNMHGTRAVQKMIDF--LSTRRQIHS 636
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++ AL V+L K +GNHVI++CL K P+ + + +A NC+++AT R GC
Sbjct: 637 -----IILALSLHVVALIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGC 691
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q G
Sbjct: 692 CVLQRCIDHASEHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQG 751
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNV++KC+ + +I+E++ + +L+ D YGNY +QTA D +
Sbjct: 752 NVCALSVQKFSSNVIEKCVRVAEHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTALDYA 811
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R L + + P +++ YGK + K++
Sbjct: 812 EPAQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 844
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 193/334 (57%), Gaps = 11/334 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E + HELM
Sbjct: 526 NRFAGTRLEDLQGEIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFG 585
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q+
Sbjct: 586 NYLCQKLLEFATDEQRNLICESVA---QELVNISLNMHGTRAVQKMIDF--LSTRRQIHS 640
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++ AL V+L K +GNHVI++CL K P+ + + +A NC+++AT R GC
Sbjct: 641 -----IILALSLHVVALIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGC 695
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q G
Sbjct: 696 CVLQRCIDHASEHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQG 755
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNV++KC+ + +I+E++ + +L+ D YGNY +QTA D +
Sbjct: 756 NVCALSVQKFSSNVIEKCVRVAEHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTALDYA 815
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R L + + P +++ YGK + K++
Sbjct: 816 EPAQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 848
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 187/326 (57%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 589 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 648
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK++ E+ + T EQ ++
Sbjct: 649 LEYSNDEQRTDLINNAA---HQLVKIALNQHGTRALQKMI---EFIS----TAEQTQTVI 698
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+L++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 699 HSLEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 758
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QKARLIA + ANA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 759 DHASGDQKARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSK 818
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + + +I+E++ E+ +++ D + NYV+QTA D + R
Sbjct: 819 QKFSSNVIEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADA-ETRA 877
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D + P ++ +G+ + K+
Sbjct: 878 RIVDCIRPILPSIRQTPHGRRIAGKM 903
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE L D+ GC LQ + E + + + L +GNY
Sbjct: 584 FTNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNY 643
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIR 508
+ Q +L + D++ A + ++L + + +QK + S EQ+ +I+ +
Sbjct: 644 LCQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED 703
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
H +V+L+ D GN+VIQ + Q +YD V N + +H +G VL +
Sbjct: 704 H--VVELVQDLNGNHVIQKCLNRLSAEDA-QFIYDAVGANCVVVGTHRHGCCVLQR 756
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 187/326 (57%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 587 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 646
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK++ E+ + T EQ ++
Sbjct: 647 LEYSNDEQRTDLINNAA---HQLVKIALNQHGTRALQKMI---EFIS----TAEQTQTVI 696
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+L++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 697 HSLEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 756
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QKARLIA + ANA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 757 DHASGDQKARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSK 816
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + + +I+E++ E+ +++ D + NYV+QTA D + R
Sbjct: 817 QKFSSNVIEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADA-ETRA 875
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D + P ++ +G+ + K+
Sbjct: 876 RIVDCIRPILPSIRQTPHGRRIAGKM 901
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE L D+ GC LQ + E + + + L +GNY
Sbjct: 582 FTNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNY 641
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIR 508
+ Q +L + D++ A + ++L + + +QK + S EQ+ +I+ +
Sbjct: 642 LCQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED 701
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
H +V+L+ D GN+VIQ + Q +YD V N + +H +G VL +
Sbjct: 702 H--VVELVQDLNGNHVIQKCLNRLSAEDA-QFIYDAVGANCVVVGTHRHGCCVLQR 754
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 193/354 (54%), Gaps = 12/354 (3%)
Query: 212 GSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPID 271
G + SR +N + T++ +E RG + + KD+ GCR+LQ+K++ERNP
Sbjct: 206 GPAKTMGSRRSNGEGESAQLSRFTNFP-LEHYRGELYGLCKDQHGCRYLQRKLEERNPDH 264
Query: 272 IEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSG 331
++MI E + ELM N+L QKL+ N+EQ T LI + +L++I + G
Sbjct: 265 VQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNAA---HQLVKIALNQHG 321
Query: 332 SRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYT 391
+R +QK+++ P EQ ++ AL++ V L + +GNHVI++CL + +
Sbjct: 322 TRALQKMIEFISTP-------EQTQTVIHALEDHVVELVQDLNGNHVIQKCLNRLSAEDA 374
Query: 392 KDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ + + + NC+ + T R GCC+LQ CI A EQ+ARLIA + +NA+ L + +GNYVV
Sbjct: 375 QFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFALVQDPFGNYVV 434
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
QYIL L P T + G ALS K SSNV++KCL + +I E++ E
Sbjct: 435 QYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADGPVRGQLIEEMLSGSE 494
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +++ D + NYV+QTA D + R L D + P ++ +G+ + K+
Sbjct: 495 LEKMLRDSFANYVVQTAMDFAD-SETRTRLIDAIRPILPSIRQTPHGRRIAGKM 547
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 193/329 (58%), Gaps = 12/329 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ S++E G+I ++A+D+ GCRFLQ+K D+ + E+I ++ +LM N+L+
Sbjct: 5 FGSVDECLGQIGVLARDQHGCRFLQRKFDDEGEDAVNKCYDEIIAEVVDLMMDPFGNYLV 64
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ N+EQ T IL L+ + + G+R +QKL++ P +L E
Sbjct: 65 QKLLECCNDEQRTG-ILKAGDGVPELVSVALNTHGTRAVQKLVETLRTPEHIRLATE--- 120
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
ALK V+L K +GNHVI+RCLQ+ + + + + +++AT R GCC+LQ
Sbjct: 121 ----ALKPGVVTLIKDLNGNHVIQRCLQRLEAEDNQFVYDAAKACSVEIATHRHGCCVLQ 176
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ A + Q+ L+ ++ A A VLS+ +GNYVVQYIL L +P A+V+ +L G Y
Sbjct: 177 RCVDHAADSQRRALVNEIAAQALVLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAE 236
Query: 477 LSLGKCSSNVVQKCLLESG---EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
LS+ K SSNVV+KCL +G EE ++ EI+ P + +L++DPYGNYV+Q+ V++
Sbjct: 237 LSMQKFSSNVVEKCLKLAGQELEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLTVTK 296
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
G + L + + + P +++ +GK +L
Sbjct: 297 G-SLHAELVERIRPHLPLIKNSPFGKRIL 324
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 191/327 (58%), Gaps = 9/327 (2%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ LRG + +A+D+ GCR LQ+++D+ +++ I + V +LM N+L+QK
Sbjct: 241 SLAGLRGVMSHIARDQHGCRLLQQRLDD-GKREVDHIFAGVSRHAAQLMVDPFGNYLMQK 299
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ V + Q L+L++ + L+RI ++ G+R +QKL+++ T+E+ SL+
Sbjct: 300 LLAVCDAGQRMALVLTLTADAFVLVRISLNVHGTRAVQKLIESLR-------TREEISLV 352
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ AL+ + L K P+GNHV+++CLQ F D K + + A +CLD+ GCC+LQ C
Sbjct: 353 IDALRPGFLELIKDPNGNHVVQKCLQAFEADDNKAIFDAAALHCLDIGMQCHGCCVLQRC 412
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I ++ E + +L+A + N + L++ +YGNYVVQY++ LKIP + + Q G+Y LS
Sbjct: 413 IARSRGEHRDKLVAAIAGNGFKLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLS 472
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ K SSNVV+KCL E II EI+ P + QL+ PY NYVI +A S+G +
Sbjct: 473 MQKFSSNVVEKCLKVFKEVDKAKIILEILATPHLEQLLQHPYANYVIYSALQNSKG-SLH 531
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKV 565
L + + + L++ Y K + ++
Sbjct: 532 SALTNAIRPHVELLRTSPYCKRIYSRA 558
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 194/327 (59%), Gaps = 11/327 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L+G I + KD+ GCRFLQKK++E NP +MI SE ELM N+L QK+
Sbjct: 528 LEDLQGDIFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLCQKM 587
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +EQ LI+ +V+S+ L+ I ++ G+R +QK++D P ++ S++V
Sbjct: 588 LEYCTDEQRN-LIVELVASE--LVTISLNMHGTRAVQKMIDFLSTP------RQIHSIIV 638
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ N+ V+L K +GNHV+++CL + + + + +A +C+++AT R GCC+LQ CI
Sbjct: 639 ALSMNV-VTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCI 697
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A E Q+ +L+A++ NA L + +GNYVVQY+L L IP+ T VV Q G LS+
Sbjct: 698 DHASEAQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSV 757
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S +I E++ + +L+ D + NYV+QT+ D + + R
Sbjct: 758 QKFSSNVMEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQ-RM 816
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVR 566
L + + P +++ YGK + +K++
Sbjct: 817 RLVECIRPILPVIRNTPYGKRIQSKLQ 843
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 191/329 (58%), Gaps = 14/329 (4%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++E+ G I +A+D+ GCRFLQK+++ R P ++ I EV+ +HELM N+L QK
Sbjct: 282 TLEKAEGNINSLARDQHGCRFLQKQLENRIPHEVHAIYREVLPHVHELMIDPFGNYLCQK 341
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ-SL 357
L+ +++ T+LI + S + ++ I + G+R +QK+++ ++ E Q +
Sbjct: 342 LLEYCTDDERTELIKN---SAKDMVPIALNQHGTRALQKMIE--------HVSNEVQIQM 390
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ ALK V+L + +GNHVI++CL K P+ + + + ENC+D+ T R GCC+LQ
Sbjct: 391 ITDALKMQVVTLIQDLNGNHVIQKCLNKLSPEQSHFIFNAVGENCIDVGTHRHGCCVLQR 450
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI A +QKA LI + NAY L + +GNYV+QYI+ L P T +VAQ L
Sbjct: 451 CIDHANGQQKAWLIQCITNNAYRLVQDPFGNYVIQYIIDLNEPSFTEPLVAQFRTHILTL 510
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEII-RHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
S K SSNVV+KCL S E+ I++E++ EI + + D Y NYV QTA D
Sbjct: 511 SKLKFSSNVVEKCLRCSSEQSKNMIVSELLDAGSEIERCLRDSYANYVYQTALDHGT-ND 569
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++Q L DL+ + +++ YG+ + AK+
Sbjct: 570 MKQRLVDLIRPHLASIRNTPYGRRISAKI 598
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 187/326 (57%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 352 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 411
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK++ E+ + T EQ ++
Sbjct: 412 LEYSNDEQRTDLINNAA---HQLVKIALNQHGTRALQKMI---EFIS----TAEQTQTVI 461
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+L++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 462 HSLEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 521
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QKARLIA + ANA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 522 DHASGDQKARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSK 581
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + + +I+E++ E+ +++ D + NYV+QTA D + R
Sbjct: 582 QKFSSNVIEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADA-ETRA 640
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D + P ++ +G+ + K+
Sbjct: 641 RIVDCIRPILPSIRQTPHGRRIAGKM 666
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE L D+ GC LQ + E + + + L +GNY
Sbjct: 347 FTNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNY 406
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIR 508
+ Q +L + D++ A + ++L + + +QK + S EQ+ +I+ +
Sbjct: 407 LCQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED 466
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
H +V+L+ D GN+VIQ + Q +YD V N + +H +G VL +
Sbjct: 467 H--VVELVQDLNGNHVIQKCLNRLSAEDA-QFIYDAVGANCVVVGTHRHGCCVLQR 519
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 25/357 (7%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
+ A +RYNN S+E+ G I + KD+ GCR+LQK+++ R P I M
Sbjct: 580 SEAMARYNNL--------------SLEQCAGNIYSLCKDQHGCRYLQKQLENRIPAQIHM 625
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
I EV + ELM N+L QKL+ ++E+ T LI + ++RI + G+R
Sbjct: 626 IWLEVNQHIVELMMDPFGNYLCQKLVEFCSDEERTVLIQNAAP---EMVRIALNQHGTRA 682
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK+++ T Q +L+V AL++ V L + +GNHVI++CL K +
Sbjct: 683 LQKMIE-------HVTTPAQVNLIVEALRHQVVELIQDLNGNHVIQKCLNKLSATDASFI 735
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + +NC+++ T R GCC+LQ CI A QK LI + A+A L + +GNYVVQYI
Sbjct: 736 FDAVGKNCVEVGTHRHGCCVLQRCIDHADGAQKVWLIECITAHAVTLVQDPFGNYVVQYI 795
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ L T +V Q GR +LS K SSNVV+KCL + + I+NE++ E+ +
Sbjct: 796 IDLNEETFTEPLVNQFKGRIISLSKHKFSSNVVEKCLRCASDAARDMIVNELLTPGEMER 855
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L+ D + NYVIQTA D + ++ L + + + P +++ YG+ + AK++ R
Sbjct: 856 LLRDSFANYVIQTALDYATA-NMKPRLVEAIRPSLPSIRATPYGRRIQAKIQAYDAR 911
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 13/334 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++E + G+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QK
Sbjct: 566 ALENVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQK 625
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ N+++ T LI + + ++RI + G+R +QK++ E+ T T Q ++
Sbjct: 626 LLEYCNDDERTVLIQNAAAD---MVRIALNQHGTRALQKMI---EFVT----TSTQIEMI 675
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
++AL+ V L + +GNHVI++CL K + + + + NC+D+ T R GCC+LQ C
Sbjct: 676 INALRYQVVELIQDLNGNHVIQKCLNKLSAKDAQFIFDAVGTNCVDVGTHRHGCCVLQRC 735
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I A +QK LI+ + +A +L + +GNYVVQYI+ L P T +V R LS
Sbjct: 736 IDHASGDQKVWLISKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLS 795
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD-VSQGRRI 537
K SSNV++KCL S E I+ E++ EI +L+ D Y NYVIQTA + + +
Sbjct: 796 RHKFSSNVIEKCLRCSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHSKF 855
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L D + P ++S YG+ + AK++ + R
Sbjct: 856 R--LVDAIRPILPSIRSTPYGRRIQAKIQAFEGR 887
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 201/332 (60%), Gaps = 17/332 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+S+ + G + L+AKD+ GCR LQK VDE N +D+ +I EVI+++ EL N+LIQ
Sbjct: 237 ASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQ 296
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KLI V NEEQ T++++ + S L++I + G+RV+QKL++ T+EQ SL
Sbjct: 297 KLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIET-------VTTKEQISL 349
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ SAL +SL + +GNHVI CL+ F P+ K +LE + C+++AT R GCC+LQ
Sbjct: 350 VKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQR 409
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ + EQ +L+ ++ N+ +L++ +GNY+VQYI+ K+ V +V+ +L G Y L
Sbjct: 410 CVSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKL 467
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+ K S+VV+KCL E +S I+NE++ L+ DPY NYVIQ A ++G +
Sbjct: 468 ATQKFGSHVVEKCLRYYPESRSQ-IVNELVSVLNFGYLLQDPYANYVIQCALSKTKG-FV 525
Query: 538 RQTLYDLV-----VDNSPFLQSHMYGKNVLAK 564
R +L + V + +P+ + ++ KN+ K
Sbjct: 526 RASLVEKVRRYENLKMTPYCK-RIFSKNLWKK 556
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 312 ILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSK 371
+ S+V S + + D G R++QK +D G + + +E + N + L
Sbjct: 236 LASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKE--------VINNVIELGT 287
Query: 372 SPHGNHVIKRCLQKFPPDYTKDLLEEIAEN---CLDLATDRSGCCLLQYCIPLAQEEQKA 428
P GN++I++ ++ + +L + + ++ + G ++Q I +++
Sbjct: 288 DPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQI 347
Query: 429 RLIADVVANAYV-LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ + ++ L GN+V+ L P ++ ++ + V+
Sbjct: 348 SLVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVL 407
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
Q+C+ S EQ +++EI R+ + L DP+GNY++Q + G
Sbjct: 408 QRCVSYSVGEQHEKLVDEISRNSLL--LAQDPFGNYLVQYIIEKKVG------------- 452
Query: 548 NSPFLQSHMYGKNVLAKVRGN 568
G NVL ++RGN
Sbjct: 453 ----------GVNVLFELRGN 463
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 196/336 (58%), Gaps = 18/336 (5%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ SIEE G+I ++A+D+ GCRFLQ+K DE I+ E+I++ +LM N+L+
Sbjct: 362 FGSIEECVGQISILARDQYGCRFLQRKFDEDGSAAIDACFDEIIEEAVDLMMDPFGNYLL 421
Query: 297 QKLIGVLNEEQMTKLI--LSVVSSQQ-----RLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
QKL+ +++Q ++ +SVV+ L+ I + G+R +QKL++
Sbjct: 422 QKLLECCSDKQRADVVRAVSVVNENANTGLPELVSIALNAHGTRAVQKLIETLS------ 475
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+ E+ L AL+ V+L K +GNHV++RCLQ+ + + + E ++ +++AT R
Sbjct: 476 -SDEEIELTTKALRPGVVTLIKDLNGNHVVQRCLQRLSAEDNQFIYEAAKKHSVEIATHR 534
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GCC+LQ CI A EEQK L+ ++ A LS +GNYVVQYIL L + A+V+ +
Sbjct: 535 HGCCVLQRCIDHATEEQKRPLVQEIADQALTLSRDPFGNYVVQYILDLGLSWANAEVMMR 594
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESG---EEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
L G Y LS+ K SSNVV+KCL + EE ++ EI+ P + +L++DPYGNYV+Q
Sbjct: 595 LVGNYAELSMQKFSSNVVEKCLKLADQQLEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQ 654
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ V++G + L + + + P +++ +GK +L
Sbjct: 655 STLMVTKG-PLHADLVERIRPHLPLIKNSPFGKRIL 689
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 189/326 (57%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L+G + + KD+ GCRFLQ+K++E NP +MI SE+ ELM N+L QKL
Sbjct: 443 LEDLQGDMPALCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKL 502
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ LI S+ L+ I ++ G+R +QKLLD TR+Q+ QSL++
Sbjct: 503 FEFATDEQRDALIDSISG---ELVSISLNMHGTRAVQKLLDF--LTTRRQV----QSLIM 553
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ N+ V+L K + NHVI++CL PP+ + + +A NC+++AT R GCC+LQ CI
Sbjct: 554 ALNLNV-VTLIKDLNSNHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCI 612
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A E Q+ +L+ ++ N+ +L +GNYVVQY+L L + +V Q G LS
Sbjct: 613 DHASESQRIQLVTEITYNSLILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSA 672
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KC+ + ++NE + + +++ D + NYV+QTA D ++ + +Q
Sbjct: 673 QKFSSNVVEKCIRVADAAGRKVLVNEFLNRNNLERMLRDSFANYVVQTALDWAEPAQ-KQ 731
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L ++ P +++ YGK + AK+
Sbjct: 732 ELVRMITPLMPSIRNTPYGKRISAKI 757
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 40/260 (15%)
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
G P R T L + L+ +L K HG ++R L++ P+Y + EI +
Sbjct: 426 GMKPKRDVETNRFAGLRLEDLQGDMPALCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPH 485
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG-------------- 447
+L TD G L Q A +EQ+ LI + +S + +G
Sbjct: 486 FAELMTDAFGNYLSQKLFEFATDEQRDALIDSISGELVSISLNMHGTRAVQKLLDFLTTR 545
Query: 448 -----------------------NYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
N+V+Q L P+ + +A ++ +
Sbjct: 546 RQVQSLIMALNLNVVTLIKDLNSNHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGC 605
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
V+Q+C+ + E Q ++ EI + I L+ DP+GNYV+Q D++ R I + +
Sbjct: 606 CVLQRCIDHASESQRIQLVTEITYNSLI--LVGDPFGNYVVQYVLDLNDNRFI-EAIVRQ 662
Query: 545 VVDNSPFLQSHMYGKNVLAK 564
V N L + + NV+ K
Sbjct: 663 FVGNVCTLSAQKFSSNVVEK 682
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 196/331 (59%), Gaps = 11/331 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+ + +E+L+G I + KD+ GCRFLQKK++E P +MI SE ELM N+L
Sbjct: 524 ATTQLEDLQGDIFALCKDQHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYL 583
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
QK++ +EQ LI+ +V+ + L+ I ++ G+R +QK++D TR+Q+
Sbjct: 584 CQKMLEYCTDEQR-NLIVELVAPE--LVTISLNMHGTRAVQKMIDF--LSTRRQI----H 634
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S++V+ N+ V+L K +GNHV+++CL + + + + +A +C+++AT R GCC+L
Sbjct: 635 SIIVALSMNV-VTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVL 693
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI A E Q+ +L+A++ NA L + +GNYVVQY+L L IP+ T VV Q G
Sbjct: 694 QRCIDHASESQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVC 753
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SSNV++KC+ S +I E++ + +L+ D + NYV+QT+ D +
Sbjct: 754 LLSVQKFSSNVIEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADAV 813
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ R L + + P +++ YGK + +K++
Sbjct: 814 Q-RMRLVECIRPILPVIRNTPYGKRIQSKLQ 843
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 188/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E R +I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 631 LESFRSQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKL 690
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK+++ P +Q L++
Sbjct: 691 LEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMIEYVNTP-------QQVHLII 740
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ CI
Sbjct: 741 EALRFRVVELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCI 800
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QK L+A + A+A +L + +GNYVVQYI+ L P T VVA G LS
Sbjct: 801 DHASGDQKQWLVARITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSR 860
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + I+ E++ PEI +L+ D + NYVIQTA + + +++
Sbjct: 861 HKFSSNVIEKCLRCAQPPSRDMIVEEMLAAPEIERLLRDSFANYVIQTALEFAT-PQLKY 919
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ R
Sbjct: 920 RLVEAIRPVLPQIRTTPYGRRIQAKISAYDGR 951
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 181/291 (62%), Gaps = 10/291 (3%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+S+ ++ G + L+AKD+ GCRFLQK V E +D+ ++ EVI+ + EL N+ IQ
Sbjct: 253 ASMVDIYGSVCLMAKDQLGCRFLQKFVGEGRFVDVMIVFKEVINHIAELGIDPFGNYFIQ 312
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ V NEEQ T++++ + S L++I + G+RV+QKL++ T+EQ SL
Sbjct: 313 KLLEVCNEEQRTQILIRLTSKPGLLIKISINNYGTRVVQKLIET-------VTTKEQISL 365
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ SAL +SL + +GNHVI CL+ F P+ K +LE + C ++AT R GCC+LQ
Sbjct: 366 VKSALVPGFLSLVRELNGNHVILNCLKFFGPNDNKFILEAAIKFCTEIATHRHGCCVLQR 425
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ + EQ +L+ ++ N+ +L++ YGNYVVQYI+ K+ V +V+ +L G Y L
Sbjct: 426 CVSYSVGEQHEKLVGEISRNSLLLAQDPYGNYVVQYIIEKKVGGV--NVMFELRGNYVKL 483
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTA 528
+ K S+VV+KC+ E +S I++E++ P QL+ DPY NYVIQ+A
Sbjct: 484 ATQKFGSHVVEKCIRFYPESRSQ-IVHELVSVPNFEQLVQDPYANYVIQSA 533
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 197/339 (58%), Gaps = 11/339 (3%)
Query: 228 ARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELM 287
AR + + +++L+G I + KD+ GCRFLQKK++E NP +MI SE ELM
Sbjct: 526 ARGKGELDATTQLDDLQGDIFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELM 585
Query: 288 RHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
N+L QK++ +EQ LI+ +V+ + L+ I ++ G+R +QK++D P
Sbjct: 586 TDPFGNYLCQKMLEYCTDEQR-NLIVELVAPE--LVTISLNMHGTRAVQKMIDFLSTP-- 640
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLAT 407
++ S++V+ N+ V+L K +GNHV+++CL + + + + +A +C+++AT
Sbjct: 641 ----RQIHSIIVALSMNV-VTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVAT 695
Query: 408 DRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
R GCC+LQ CI A E Q+ +L+A++ NA L + +GNYVVQY+L L IP+ T VV
Sbjct: 696 HRHGCCVLQRCIDHASEAQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVV 755
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQT 527
Q G LS+ K SSNV++KC+ S +I E++ + +L+ D + NYV+QT
Sbjct: 756 RQFVGNVCLLSVQKFSSNVIEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQT 815
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ D + + R L + + P +++ YGK + +K++
Sbjct: 816 SLDYADPVQ-RMRLVECIRPILPVIRNTPYGKRIQSKLQ 853
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 189/331 (57%), Gaps = 11/331 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERNP ++MI E + ELM N+L QKL
Sbjct: 587 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 646
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK++ E+ + T EQ ++
Sbjct: 647 LEYSNDEQRTDLINNAA---HQLVKIALNQHGTRALQKMI---EFIS----TAEQTQTVI 696
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+L++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 697 HSLEDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 756
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QKARLIA + ANA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 757 DHASGDQKARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSK 816
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + + +I+E++ E+ +++ D + NYV+QTA D + R
Sbjct: 817 QKFSSNVIEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADA-ETRA 875
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKN 570
+ D + P ++ +G+ + K+ ++
Sbjct: 876 RIVDCIRPILPSIRQTPHGRRIAGKMMASEG 906
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE L D+ GC LQ + E + + + L +GNY
Sbjct: 582 FTNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNY 641
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIR 508
+ Q +L + D++ A + ++L + + +QK + S EQ+ +I+ +
Sbjct: 642 LCQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED 701
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
H +V+L+ D GN+VIQ + Q +YD V N + +H +G VL +
Sbjct: 702 H--VVELVQDLNGNHVIQKCLNRLSAEDA-QFIYDAVGANCVVVGTHRHGCCVLQR 754
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 187/321 (58%), Gaps = 16/321 (4%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
SS+ + G++ +AKD+ GCRFLQKK+ + ++M+ E+ D + ELM N+L Q
Sbjct: 403 SSMTDAVGKVYKLAKDQYGCRFLQKKITDGEQ-GLQMVFDEIYDHIVELMTDPFGNYLCQ 461
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ E T LI+ VS + L+ I ++ G+R +QKL++ TQ+Q
Sbjct: 462 KLVEHCTNEHKT-LIIRAVS--KDLINISMNMHGTRAVQKLIEC-------LTTQDQIGE 511
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ ALK+ V L K +GNHVI+RCLQ+ P+ + + +A C+++AT + GCC+LQ
Sbjct: 512 IIEALKDSVVPLIKDLNGNHVIQRCLQQLIPENKQFIYNAVAGRCVEVATHKHGCCVLQR 571
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI A E Q+ LI +V+ANA+ L ++ +GNYVVQY+L L + ++A+ G +L
Sbjct: 572 CIDHAAESQRMMLIKEVIANAHTLIQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASL 631
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAW---DVSQG 534
S+ K SSNV++KCL E +I E++ + L+ D +GNYV+QTA D +Q
Sbjct: 632 SINKFSSNVIEKCLRIGNENVKNTMIEEVLEDRNLSALLQDSFGNYVVQTAISISDANQF 691
Query: 535 RRIRQTL--YDLVVDNSPFLQ 553
R + Y ++ N+P+ +
Sbjct: 692 ARFNNNVKPYLPIIKNAPYYK 712
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 189/330 (57%), Gaps = 9/330 (2%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
+ Y S+ LRG + VA+D+ GCRFLQ+++D+ +++ + + V +LM + N+
Sbjct: 181 SKYESLVGLRGYMYHVARDQHGCRFLQQRLDD-GKREVDFVFAGVARHAVDLMVNPFGNY 239
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
L+QKL+ V + EQ L+ ++ L+RI ++ G+R +QKL+++ T+E+
Sbjct: 240 LMQKLLAVCDREQRMALVRALTKDPFVLVRISLNVHGTRAVQKLIESLR-------TREE 292
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
L+V+AL+ + L K P+GNHV+++CLQ F D K + A CLD+ GCC+
Sbjct: 293 IQLVVAALRPGFLELIKDPNGNHVVQKCLQAFEADDNKPIFAAAAIYCLDIGMQCHGCCV 352
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI + E K +L+A + N + L++ +YGNYVVQY++ LK+ A + Q G+Y
Sbjct: 353 LQRCIARSTGEHKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVATANASLAQQFEGKY 412
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS+ K SSNVV+KCL E II E++ P +L+ PY NYV+ +A S+G
Sbjct: 413 IHLSMQKFSSNVVEKCLKVFKEADKATIILELLAAPHFERLLQHPYANYVVYSALQNSKG 472
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ L + + + L++ Y K + ++
Sbjct: 473 -SLHSALTNAIRPHVELLRTSPYCKRIYSR 501
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 214/420 (50%), Gaps = 15/420 (3%)
Query: 154 LQSGFEGLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGS 213
+ +GF LN+ G N + Q + T A Y S S G+
Sbjct: 525 MTNGFNNLNMHMAG--GANGFSPQAQWSPSGPAQYTQPPAYGGYQQFSPSGPSGQAVAGA 582
Query: 214 STNASSRYNNFYARARHHHHRTSYSSI--EELRGRIILVAKDEQGCRFLQKKVDERNPID 271
S R N R + ++SI E+L G I + KD+ GCRFLQ+K++ERN
Sbjct: 583 GRFDSPRANTQQRRQAAEEAQAKFNSIKVEQLTGEIYTLCKDQHGCRFLQRKLEERNEQT 642
Query: 272 IEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSG 331
++ I EV + + ELM N+L QKL+ N++Q T+LI + + ++ +I + G
Sbjct: 643 VQAIFEEVRNHMIELMVDPFGNYLCQKLLESANDDQRTELIKNAMP---QMTKIALNQHG 699
Query: 332 SRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYT 391
+R +QK+++ P EQ +L++ AL+N V L + +GNHVI++CL +
Sbjct: 700 TRALQKMIEFISTP-------EQTALIIEALRNDVVLLIQDLNGNHVIQKCLNHLSSNDA 752
Query: 392 KDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ + + NC+ + T R GCC+LQ CI A QK ++ V+ NAY L + +GNYVV
Sbjct: 753 IFIFDAVGANCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVIRNAYSLVQDPFGNYVV 812
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
QYIL L P T + G LS K SSNV++KC+ + E II+EI+
Sbjct: 813 QYILDLSEPCFTEPLCRAFYGEIANLSRQKFSSNVMEKCIRCASNETKRAIISEIMAPQT 872
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
I +++ D + NYV+QTA D + ++ TL + + P +++ +G+ + +K+ NR
Sbjct: 873 IEKMLRDGFANYVVQTAMDFAD-EDLKPTLVENIRMVIPAIRNTPHGRRIQSKISDYDNR 931
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 187/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E++ G I + KD+ GCR+LQK+++ R P I MI E + ELM N+L QKL
Sbjct: 605 LEQVGGTIYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKL 664
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + S L+RI + G+R +QK+++ P Q +L+V
Sbjct: 665 LEYCNDDERTVLIQNASSD---LVRIALNQHGTRALQKMIEHVTTPV-------QINLIV 714
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+N V L + +GNHVI++CL K + + + ++C+++ T R GCC+LQ CI
Sbjct: 715 EALRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCI 774
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK LI + A+A L + +GNYVVQY++ L T +V Q R ALS
Sbjct: 775 DHADGAQKVWLIERITAHAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSK 834
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KCL + E+ I++E++ EI +L+ D +GNYVIQTA D S +
Sbjct: 835 HKFSSNVVEKCLRCASEQSRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYSTPMS-KH 893
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + N P +++ YG+ + AK++ R
Sbjct: 894 RLVEAIRPNLPSIRATPYGRRIQAKIQAYDAR 925
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 191/335 (57%), Gaps = 17/335 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 584 LESFRGQIYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKL 643
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +Q L++
Sbjct: 644 LEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQQVHLII 693
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ CI
Sbjct: 694 EALRFRVVELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCI 753
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQK L+ + +A +L + +GNYVVQYI+ L P T +VA G LS
Sbjct: 754 DHASGEQKPWLVGRITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSR 813
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QGRR 536
K SSNV++KCL S I+ E++ E+ +L+ D + NYVIQTA + + Q R
Sbjct: 814 HKFSSNVIEKCLRCSQAPSKDMIVEELLAPQEMERLLRDSFANYVIQTALEFATPHQKYR 873
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ +++ ++ P +++ YG+ + AKV NR
Sbjct: 874 LVESIRPIL----PQIRTTPYGRRIQAKVSAYDNR 904
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 194/332 (58%), Gaps = 13/332 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y+SI+++ G I + +D+ GCRFLQKK++E + E+I EV D + ELM N+L
Sbjct: 705 TYTSIDQVMGSIYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYL 764
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
QKL+ N+ Q +I V + ++RI ++ G+R +QK++ EY T T EQ
Sbjct: 765 CQKLLEHCNDRQRLTIIEKVGTD---IVRISMNMHGTRAVQKMI---EYLT----TPEQI 814
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN--CLDLATDRSGCC 413
L+ +LK+ V L + +GNHVI++CL K P + + + ++ + C+ +AT R GCC
Sbjct: 815 QLIKRSLKDSVVPLIQDLNGNHVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCC 874
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A E QK +LI +V+AN+ VL + YGNYVVQY+L L + ++ + G
Sbjct: 875 VLQRCIDHASESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGH 934
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
L+ K SSNVV+KCL + +I E+I + ++ L+ DPY NYVIQT+ +S+
Sbjct: 935 VPILATQKFSSNVVEKCLHVADAITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISE 994
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + P L++ YGK + K+
Sbjct: 995 PHQ-HTKLVEAIRPHLPLLKNTPYGKRIQNKI 1025
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 191/335 (57%), Gaps = 17/335 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 574 LESFRGQIYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKL 633
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +Q L++
Sbjct: 634 LEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQQVHLII 683
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ CI
Sbjct: 684 EALRFRVVELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCI 743
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQK L+ + +A +L + +GNYVVQYI+ L P T +VA G LS
Sbjct: 744 DHASGEQKPWLVGRITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSR 803
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QGRR 536
K SSNV++KCL S I+ E++ E+ +L+ D + NYVIQTA + + Q R
Sbjct: 804 HKFSSNVIEKCLRCSQAPSKDMIVEELLAPQEMERLLRDSFANYVIQTALEFATPHQKYR 863
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ +++ ++ P +++ YG+ + AKV NR
Sbjct: 864 LVESIRPIL----PQIRTTPYGRRIQAKVSAYDNR 894
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 188/333 (56%), Gaps = 11/333 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++E + G+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QK
Sbjct: 376 ALENVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQK 435
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ N+++ T LI + + ++RI + G+R +QK+++ PT Q ++
Sbjct: 436 LLEFCNDDERTVLIQNAAAD---MVRIALNQHGTRALQKMIEFVTTPT-------QIEMI 485
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
++AL+ V L + +GNHVI++CL K + + + + +C+D+ T R GCC+LQ C
Sbjct: 486 INALRFQVVELIQDLNGNHVIQKCLNKLSAQDAQFIFDAVGTHCVDVGTHRHGCCVLQRC 545
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I A +QK LIA + +A +L + +GNYVVQYI+ L P T +V R LS
Sbjct: 546 IDHASGDQKTWLIAKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLS 605
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
K SSNV++KCL S E I+ E++ EI +L+ D Y NYVIQTA + + +
Sbjct: 606 RHKFSSNVIEKCLRCSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHG-K 664
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L D + P ++S YG+ + AK++ + R
Sbjct: 665 FRLVDAIRPILPSIRSTPYGRRIQAKIQAFEGR 697
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 187/333 (56%), Gaps = 11/333 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++E + G+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QK
Sbjct: 8 ALESVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQK 67
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ N+++ T LI + ++RI + G+R +QK+++ PT Q ++
Sbjct: 68 LLEFCNDDERTVLIQNAAVD---MVRIALNQHGTRALQKMIEFVTTPT-------QIGMI 117
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
++AL+ V L + +GNHVI++CL K + + + + NC+D+ T R GCC+LQ C
Sbjct: 118 INALRFQVVELIQDLNGNHVIQKCLNKLSALDAQFIFDAVGTNCVDVGTHRHGCCVLQRC 177
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I A EQK LIA + +A +L + +GNYVVQYI+ L P T +V R LS
Sbjct: 178 IDHASGEQKVWLIAKITEHAPILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLS 237
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
K SSNV++KCL S E I+ E++ EI +L+ D Y NYVIQTA + + +
Sbjct: 238 RHKFSSNVIEKCLRCSQEPSRDMIVEELLSPGEIERLLRDSYANYVIQTALEYATPHS-K 296
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L D + P ++S YG+ + AK++ + R
Sbjct: 297 YRLVDAIRPILPAIRSTPYGRRIQAKIQAFEGR 329
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 190/334 (56%), Gaps = 11/334 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +EEL+G I + KD+ GCR+LQKK++E P +MI E ELM
Sbjct: 551 NRFAGTRLEELQGEIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFG 610
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ ++Q + SV Q L+ I ++ G+R +QK++D TR+Q+
Sbjct: 611 NYLCQKLLEFATDDQRNLICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQIHS 665
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++ AL VSL K +GNHVI++CL K P+ + + +A NC+++AT R GC
Sbjct: 666 -----IILALSLHVVSLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGC 720
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q G
Sbjct: 721 CVLQRCIDHASEAQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLG 780
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D +
Sbjct: 781 NICALSVQKFSSNVMEKCIRVAEHNTRKLVIEELLNRTRLEKLLRDSYGNYCVQTALDYA 840
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R L + + P +++ YGK + K++
Sbjct: 841 EPGQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 873
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 188/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E++ G I + KD+ GCR+LQK+++ R P I MI E + ELM N+L QKL
Sbjct: 594 LEQVGGTIYSLCKDQHGCRYLQKQLENRIPDQIHMIWLETNQHVVELMTDPFGNYLCQKL 653
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T L+ + S+ ++ I + G+R +QK+++ TQ Q +L+V
Sbjct: 654 LEYCNDDERTVLVQNSTSN---MVTIALNQHGTRALQKMIE-------HVTTQVQINLIV 703
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+N V L + +GNHVI++CL K + + + ++C+++ T R GCC+LQ CI
Sbjct: 704 EALRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCI 763
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK LI + +A L + +GNYVVQYI+ L P T +V Q GR LS
Sbjct: 764 DHADGAQKIWLIERITDHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSK 823
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNVV+KCL + EE I++E++ EI +L+ D +GNYVIQTA D + +
Sbjct: 824 HKFSSNVVEKCLRCAAEESRDMIVSELLTPGEIDRLLRDSFGNYVIQTALDYATPMS-KH 882
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK++ + R
Sbjct: 883 RLIEAIRPILPSIRATPYGRRIQAKIQTHDTR 914
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 185/326 (56%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG + + KD+ GCR+LQ+K++ERN ++MI E + ELM N+L QKL
Sbjct: 602 LEHYRGELYGLCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKL 661
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L++I + G+R +QK+++ P EQ + ++
Sbjct: 662 LEYSNDEQRTTLINNAA---HQLVKIALNQHGTRALQKMIEFISTP-------EQTTTVI 711
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+L++ V L + +GNHVI++CL + + + + + + NC+ + T R GCC+LQ CI
Sbjct: 712 QSLQDHVVELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCI 771
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 772 DHASGEQRARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSK 831
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + + +I+E++ E+ +++ D + NYV+QTA D + R
Sbjct: 832 QKFSSNVIEKCLRTADVQIRRQMIDEMLAGNELEKMLRDSFANYVVQTAMDFADA-DTRT 890
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + P ++ +G+ + K+
Sbjct: 891 RIVECIRPILPSIRQTPHGRRIAGKM 916
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE L D+ GC LQ + E + + + L +GNY
Sbjct: 597 FTNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNY 656
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIR 508
+ Q +L + ++ A + ++L + + +QK + S EQ+T +I +
Sbjct: 657 LCQKLLEYSNDEQRTTLINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTTTVIQSLQD 716
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
H +V+L+ D GN+VIQ + Q +YD V N + +H +G VL +
Sbjct: 717 H--VVELVQDLNGNHVIQKCLNRLSAEDA-QFIYDAVGANCVVVGTHRHGCCVLQR 769
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 181/292 (61%), Gaps = 10/292 (3%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+S+ + G + L+AKD+ GCR LQK VDE N +D+ +I EVI+++ EL N+LIQ
Sbjct: 237 ASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQ 296
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KLI V NEEQ T++++ + S L++I + G+RV+QKL++ T+EQ SL
Sbjct: 297 KLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIET-------VTTKEQISL 349
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ SAL +SL + +GNHVI CL+ F P+ K +LE + C+++AT R GCC+LQ
Sbjct: 350 VKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQR 409
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ + EQ +L+ ++ N+ +L++ +GNY+VQYI+ K+ V +V+ +L G Y L
Sbjct: 410 CVSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKL 467
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAW 529
+ K S+VV+KCL E +S I+NE++ L+ DPY NYVIQ A
Sbjct: 468 ATQKFGSHVVEKCLRYYPESRSQ-IVNELVSVLNFGYLLQDPYANYVIQCAL 518
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 312 ILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSK 371
+ S+V S + + D G R++QK +D G + + +E + N + L
Sbjct: 236 LASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKE--------VINNVIELGT 287
Query: 372 SPHGNHVIKRCLQKFPPDYTKDLLEEIAEN---CLDLATDRSGCCLLQYCIPLAQEEQKA 428
P GN++I++ ++ + +L + + ++ + G ++Q I +++
Sbjct: 288 DPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQI 347
Query: 429 RLIADVVANAYV-LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ + ++ L GN+V+ L P ++ ++ + V+
Sbjct: 348 SLVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVL 407
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
Q+C+ S EQ +++EI R+ + L DP+GNY++Q + G
Sbjct: 408 QRCVSYSVGEQHEKLVDEISRNSLL--LAQDPFGNYLVQYIIEKKVG------------- 452
Query: 548 NSPFLQSHMYGKNVLAKVRGN 568
G NVL ++RGN
Sbjct: 453 ----------GVNVLFELRGN 463
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 189/337 (56%), Gaps = 19/337 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L+G I + KD+ GCRFLQ+K++ERN +++I EV + +LM N+L QKL
Sbjct: 601 VEQLQGEIYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKL 660
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N++Q T LI + ++ + +I + G+R +QK++ EY + T EQ +L++
Sbjct: 661 LESTNDDQRTVLIQN---AKPAMTKIALNQHGTRALQKMI---EYIS----TPEQTALII 710
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+N V L + +GNHVI++CL + + NC+ + T R GCC+LQ CI
Sbjct: 711 DALRNDVVLLIQDLNGNHVIQKCLNHLSSIDAAFIFHAVGNNCITVGTHRHGCCVLQRCI 770
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK ++ V+ NAY L + +GNYVVQYIL L P T + G ALS
Sbjct: 771 DHADGLQKGEMVDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCQAFFGEIPALSR 830
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S E ++ EI+ + +L+ D + NYV+QTA D +
Sbjct: 831 QKFSSNVIEKCIRCSSETTKRSLVQEIMPTQVLEKLLRDGFANYVVQTAMDFAD-----P 885
Query: 540 TLYDLVVDNS----PFLQSHMYGKNVLAKVRGNKNRF 572
L L+V+N P +++ +G+ +L+K+ NR+
Sbjct: 886 DLKPLLVENVRQILPGIRNTPHGRRILSKISDYDNRY 922
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 104/264 (39%), Gaps = 54/264 (20%)
Query: 347 RQQLTQEQQ----SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENC 402
R+Q ++ Q S+ V L+ +L K HG ++R L++ + + EE+ +
Sbjct: 585 RRQAAEDAQAKFNSIKVEQLQGEIYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTHM 644
Query: 403 LDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG-LKIPQ 461
+DL D G L Q + ++Q+ LI + ++ + +G +Q ++ + P+
Sbjct: 645 VDLMVDPFGNYLCQKLLESTNDDQRTVLIQNAKPAMTKIALNQHGTRALQKMIEYISTPE 704
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCL------------------------------ 491
TA ++ L L ++V+QKCL
Sbjct: 705 QTALIIDALRNDVVLLIQDLNGNHVIQKCLNHLSSIDAAFIFHAVGNNCITVGTHRHGCC 764
Query: 492 -----------LESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
L+ GE +++ +IR+ L+ DP+GNYV+Q D+S+ +
Sbjct: 765 VLQRCIDHADGLQKGE-----MVDHVIRN--AYALVQDPFGNYVVQYILDLSE-PCFTEP 816
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAK 564
L P L + NV+ K
Sbjct: 817 LCQAFFGEIPALSRQKFSSNVIEK 840
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 185/326 (56%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERNP +++I SE + ELM N+L QKL
Sbjct: 597 LEHYKGELYSLCKDQHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNYLCQKL 656
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + L++I + G+R +QK++ E+ + T +Q ++
Sbjct: 657 LEYSNDEQRTALIDNAAP---ELVKIALNQHGTRALQKMI---EFIS----TSKQTQTVI 706
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ V L + +GNHVI++CL + P+ + + E + NC+ + T R GCC+LQ CI
Sbjct: 707 NALQYHVVDLVQDLNGNHVIQKCLNRLTPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCI 766
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QKARLI+ + ++++ L + +GNYVVQYIL L P T + + AG LS
Sbjct: 767 DHASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSK 826
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I+E + E+ +++ D + NYV+QTA D R
Sbjct: 827 QKFSSNVIEKCLRTADNYMKRQMIDEFLAGNELEKMLRDSFANYVVQTAMDFCD-LETRN 885
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + V P ++ +G+ + K+
Sbjct: 886 RIVEAVRPILPSIRQTPHGRRIAGKI 911
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 185/328 (56%), Gaps = 11/328 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ +G + + KD+ GCR+LQ+K++ERNP ++MI +E + ELM N+L QKL
Sbjct: 580 LEQYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKL 639
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N++Q T+LI + +L+ I + G+R +QK+++ P +Q +++
Sbjct: 640 LEYSNDDQRTRLIHNAAP---QLVPIALNQHGTRALQKMIEFVSTP-------QQIQMVI 689
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL + + + + + + +C+ + T R GCC+LQ CI
Sbjct: 690 DALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCI 749
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G LS
Sbjct: 750 DHASGEQRARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSK 809
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I+EI+ E+ ++ D Y NYV+QTA D + R
Sbjct: 810 QKFSSNVIEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADN-RN 868
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
+ + V P ++ +G+ + K+ G
Sbjct: 869 RIIEAVRPILPSIRQTPHGRRIAGKIAG 896
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 185/328 (56%), Gaps = 11/328 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ +G + + KD+ GCR+LQ+K++ERNP ++MI +E + ELM N+L QKL
Sbjct: 580 LEQYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKL 639
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N++Q T+LI + +L+ I + G+R +QK+++ P +Q +++
Sbjct: 640 LEYSNDDQRTRLIHNAAP---QLVPIALNQHGTRALQKMIEFVSTP-------QQIQMVI 689
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL + + + + + + +C+ + T R GCC+LQ CI
Sbjct: 690 DALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCI 749
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G LS
Sbjct: 750 DHASGEQRARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSK 809
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I+EI+ E+ ++ D Y NYV+QTA D + R
Sbjct: 810 QKFSSNVIEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADN-RN 868
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
+ + V P ++ +G+ + K+ G
Sbjct: 869 RIIEAVRPILPSIRQTPHGRRIAGKIAG 896
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 196/328 (59%), Gaps = 18/328 (5%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G+I ++A+D+ GCRFLQ+K DE +++ E+I + ELM N+L+QKLI +
Sbjct: 1 GQISVLARDQHGCRFLQRKFDEEGAKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCS 60
Query: 305 EEQMTKLI--LSVVSSQQ-----RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+EQ + ++ +SVV L+ I + G+R +QKL++ P E+ SL
Sbjct: 61 DEQRSGVLRAVSVVKDDSLDGLPELVTIALNTHGTRAVQKLIEMLNSP-------EEVSL 113
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+AL+ V+L K +GNHVI+RCLQ+ + + + + +C+++AT R GCC+LQ
Sbjct: 114 ATNALRPGVVTLIKDLNGNHVIQRCLQRLSSEDNQFIYDAAKVHCVEIATHRHGCCVLQR 173
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI A +EQ+ L+ ++ + A VLS+ +GNYVVQYIL L + +V+ QL G Y L
Sbjct: 174 CIDHAIDEQRRPLVLEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAEL 233
Query: 478 SLGKCSSNVVQKCLL---ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
S+ K SSNVV+KCL S E+ ++ EI++ P + +L++DPYGNYV+Q+ V++G
Sbjct: 234 SMQKFSSNVVEKCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVTKG 293
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ L + + + P +++ +GK +L
Sbjct: 294 -VLHTELVERIRPHLPLIKNSPFGKRIL 320
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 188/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L G I + KD+ GCRFLQ+K++ERN ++ I EV D + ELM N+L QKL
Sbjct: 83 VEQLVGEIYGLCKDQHGCRFLQRKLEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKL 142
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +N+EQ T LI++ + + +I + G+R +QK++ EY T + TQE ++
Sbjct: 143 LESVNDEQRTALIVNAAPA---MNKIALNQHGTRALQKMI---EYITTPEQTQE----II 192
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+N V L + +GNHVI++CL + E + NC+ + T R GCC+LQ CI
Sbjct: 193 KALRNDVVLLIQDLNGNHVIQKCLNHLSSIDATFIFEAVGNNCITVGTHRHGCCVLQRCI 252
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK ++ V+ANAY L + +GNYVVQYIL L P T + G ALS
Sbjct: 253 DHADGLQKGEMVDHVIANAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIPALSR 312
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ + E I+ EI+ + +L+ D + NYV+QTA D + ++
Sbjct: 313 QKFSSNVIEKCIRCASVETRREIVREIMPPQTLEKLLRDGFANYVVQTAMDFAD-DELKA 371
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+++ V P +++ +G+ + +K+ NR
Sbjct: 372 LMFENVRSILPGIRNTPHGRRIQSKLAEYDNR 403
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 182/333 (54%), Gaps = 11/333 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+ + + I +L G I ++ KD+ GCR LQ+K+DER+ I +EV D + ELM
Sbjct: 11 QKYAQTDIRDLVGEIYMLCKDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFG 70
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+G N+EQ T LI + + + + +I + G+R +QK+++ P
Sbjct: 71 NYLCQKLLGGTNDEQRTALIRNAMPA---MTKIALNQHGTRALQKMIEFISTP------- 120
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
EQ S+++ AL+ V L + +GNHVI+ CL + + + + + NC+ + T R GC
Sbjct: 121 EQTSMIIDALRYDVVQLIQDLNGNHVIQNCLNHLSSEDAQFIFDAVGANCVTVGTHRHGC 180
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A QK RL+ V+ NA+ L + +GNYVVQYIL L P T +
Sbjct: 181 CVLQRCIDHASGLQKGRLVDQVIHNAFSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQK 240
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS K SSNVV+KC+ +G E +I EI+ E+ +L+ D + NYV+QTA D +
Sbjct: 241 NVVFLSKQKFSSNVVEKCIRCAGAETKRMLIAEIVAPTELEKLLRDSFANYVVQTAMDFA 300
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + P ++S YG+ + K+
Sbjct: 301 D-EDTKPILMGNIRPMVPAIRSTPYGRRIQTKL 332
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
LQK+ +DL+ EI C D+ GC LQ + E + +V + L
Sbjct: 10 LQKYAQTDIRDLVGEIYMLC----KDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELM 65
Query: 443 EHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGI 502
+GNY+ Q +LG + ++ ++L + + +QK + + T +
Sbjct: 66 TDPFGNYLCQKLLGGTNDEQRTALIRNAMPAMTKIALNQHGTRALQKMIEFISTPEQTSM 125
Query: 503 INEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
I + +R+ ++VQLI D GN+VIQ + Q ++D V N + +H +G VL
Sbjct: 126 IIDALRY-DVVQLIQDLNGNHVIQNCLN-HLSSEDAQFIFDAVGANCVTVGTHRHGCCVL 183
Query: 563 AK 564
+
Sbjct: 184 QR 185
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 193/353 (54%), Gaps = 11/353 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E+L G I + KD+ GCR+LQKK++E P +MI E +LM
Sbjct: 515 NRFAGTRLEDLVGEIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFG 574
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D + L
Sbjct: 575 NYLCQKLLEYSTDEQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDLGD 631
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R GC
Sbjct: 632 VQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGC 691
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q AG
Sbjct: 692 CVLQRCIDHASEHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAG 751
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D +
Sbjct: 752 NVCALSVQKFSSNVIEKCIRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYA 811
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR-------GNKNRFHNRVAM 578
+ + R L + + P +++ YGK + K++ G HN+ A+
Sbjct: 812 EPSQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQREHSDAFGGGGYHHNQQAL 863
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 192/329 (58%), Gaps = 11/329 (3%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ +EEL+G I + KD+ GCRFLQKK++E N +MI SE ELM N+L Q
Sbjct: 225 TQLEELQGDIFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQ 284
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K++ +EQ LI+ +V+ + L+ I ++ G+R +QK++D P ++ S+
Sbjct: 285 KMLEYCTDEQ-RNLIVELVAPE--LVTISLNMHGTRAVQKMIDFLSTP------RQIHSI 335
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V+ N+ V+L K +GNHV+++CL + + + + +A +C+++AT R GCC+LQ
Sbjct: 336 IVALSMNV-VTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQR 394
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI A E Q+ +L+A++ NA L + +GNYVVQY+L L I + T VV Q G L
Sbjct: 395 CIDHASESQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLL 454
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
S+ K SSNV++KC+ S +I E++ + +L+ D Y NYV+QT+ D + +
Sbjct: 455 SVQKFSSNVMEKCIRVSEPGVRKQLIEELLNRARLEKLLRDSYANYVVQTSLDYADPVQ- 513
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R L + + P +++ YGK + +K++
Sbjct: 514 RMRLVECIRPILPVIRNTPYGKRIQSKLQ 542
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 184/328 (56%), Gaps = 11/328 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ RG + + KD+ GCR+LQ+K++ERN ++MI E + ELM N+L QKL
Sbjct: 607 LEQYRGELYGLCKDQHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNYLCQKL 666
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N++Q T+LI + +L+ I + G+R +QK+++ P +Q +++
Sbjct: 667 LEYSNDDQRTRLIHNAAP---QLVPIALNQHGTRALQKMIEFVSTP-------QQIRMVI 716
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL + + + + + + +C+ + T R GCC+LQ CI
Sbjct: 717 DALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCI 776
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A EQ+ARLIA + +NA+ L + +GNYVVQYIL L P T + G ALS
Sbjct: 777 DHASGEQRARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSK 836
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I+EI+ E+ ++ D Y NYV+QTA D + R
Sbjct: 837 QKFSSNVIEKCLRTAEYPMRCRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADN-RN 895
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
+ + V P ++ +G+ + K+ G
Sbjct: 896 RIIEAVRPILPSIRQTPHGRRIAGKIAG 923
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 188/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E R +I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 617 LESFRSQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKL 676
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK+++ P +Q L++
Sbjct: 677 LEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMIEYVNTP-------QQVHLII 726
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ CI
Sbjct: 727 EALRFRVVELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCI 786
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QK L+A + A+A +L + +GNYVVQYI+ L P T VVA G LS
Sbjct: 787 DHASGDQKQWLVARITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSR 846
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + I+ E++ EI +L+ D + NYVIQTA + + +++
Sbjct: 847 HKFSSNVIEKCLRCAQPPSKDMIVEEMLVPAEIERLLRDSFANYVIQTALEFAT-PQLKY 905
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ +R
Sbjct: 906 RLVEAIRPILPQIRTTPYGRRIQAKISAYDSR 937
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 207/370 (55%), Gaps = 13/370 (3%)
Query: 199 NLSHGFLSDHHHLGSSTNASSRYNNFYARAR--HHHHRTSYSSIEELRGRIILVAKDEQG 256
LSHG +++ G+ + + + + R+ +R + + +E+L+G I + KD+ G
Sbjct: 536 GLSHGTINNRMVGGADSKMNGLHGPKHKRSDLDREFNRFAGTRLEDLQGEIASLCKDQHG 595
Query: 257 CRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVV 316
CR+LQKK++E P ++I E ELM N+L QKL+ ++EQ + SV
Sbjct: 596 CRYLQKKLEEGVPEHRDIIFHETFGHFAELMTDPFGNYLCQKLVEFSSDEQRNVICESVA 655
Query: 317 SSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGN 376
Q L+ I ++ G+R +QK++D P Q ++ AL V+L K +GN
Sbjct: 656 ---QDLVTISLNMHGTRAVQKMIDFLSTP-------RQIHAIIVALSLHVVTLIKDLNGN 705
Query: 377 HVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVA 436
HVI++CL K P+ + + +A+NC+++AT R GCC+LQ CI A + Q+ +L+ ++
Sbjct: 706 HVIQKCLNKLVPEDNQFIYNAVAQNCVEVATHRHGCCVLQRCIDHASDSQRVQLVQEITY 765
Query: 437 NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGE 496
NA L + YGNYVVQYIL L + + V+ Q +G ALS+ K SSNV++KC+ +
Sbjct: 766 NALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALSVQKFSSNVIEKCVRVAEP 825
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+I+E++ + +L+ D +GNY +QTA D ++ + R L + + P +++
Sbjct: 826 HTRKLLIDELLHRNRLEKLLRDSFGNYCVQTALDYAEPTQ-RALLVEGIRPILPMIRNTP 884
Query: 557 YGKNVLAKVR 566
YGK + +K++
Sbjct: 885 YGKRIQSKLQ 894
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 189/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQKK++ERNP + MI +E + ELM N+L QKL
Sbjct: 341 LESFVGTIYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKL 400
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +Q +++
Sbjct: 401 LEFCNDDERTTLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQQVHIII 450
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL + PP + + + + NC+++ T R GCC+LQ CI
Sbjct: 451 EALRFRVVELIQDLNGNHVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCI 510
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QK LI + +A VL + +GNYVVQYI+ L P T +V LS
Sbjct: 511 DHASGDQKLWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSR 570
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL S I++E++R+ ++ +L+ D + NYVIQTA + + +
Sbjct: 571 HKFSSNVIEKCLRCSQPPSRDLIVDELLRNQDMERLLRDSFANYVIQTALEYAT-PHYKY 629
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ NR
Sbjct: 630 RLVEAIRPILPQIRTTPYGRRIQAKISAFDNR 661
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 188/335 (56%), Gaps = 11/335 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L G I + KD+ GCRFLQ+K++ERN +++I EV + + ELM N+L QKL
Sbjct: 625 VEQLTGEIYNLCKDQHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPFGNYLCQKL 684
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+ Q T LI + S + +I + G+R +QK++ EY + T EQ L+V
Sbjct: 685 LESANDNQRTILIENASPS---MTKIALNQHGTRALQKMI---EYIS----TPEQIQLIV 734
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL N V L + +GNHVI++CL + E + +C+ + T R GCC+LQ CI
Sbjct: 735 KALGNDVVVLIQDLNGNHVIQKCLNHLSSIDASFIFEAVGAHCITVGTHRHGCCVLQRCI 794
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK +++ V+ NAY L + +GNYVVQYIL L P T + G ALS
Sbjct: 795 DHADGLQKGQMVDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALSR 854
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S E +I E++ + +L+ D + NYV+QTA + S ++
Sbjct: 855 QKFSSNVIEKCIRCSSNETRRELIRELMVPQVLEKLLRDGFANYVVQTAMEFSDD-ELKP 913
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
TLY+ V P +++ +G+ + +K++ +R N
Sbjct: 914 TLYENVRMIIPGIRNTPHGRRIASKIQEYDSRMAN 948
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 235/476 (49%), Gaps = 47/476 (9%)
Query: 107 AAPRPPLSQYLPYP-IP-------LNQAQYS---FINSLPTSFPLENHETIDLQSGFDLQ 155
A P P+SQ P P IP + QYS F S ++P ++ +G L
Sbjct: 486 AGPMGPVSQGGPAPAIPTTGPAQAMQAHQYSNGGFFQSGGQTYPSLSNAVTTYPNGLPLL 545
Query: 156 SGFEGLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSST 215
+ + + L P++L +N N Y P+ + + + L
Sbjct: 546 A----TQLASMSLSAPSSLYPNQNYTGYGNIYT-----QPATRDSQARVIQNRRAL--DN 594
Query: 216 NASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMI 275
A +R+NN S+E++ G I + KD+ GCR+LQK+++ R P + MI
Sbjct: 595 EAMNRFNNL--------------SLEQVGGTIYELCKDQHGCRYLQKQLENRQPEHVHMI 640
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
E + ELM N+L QKL+ NEE+ T LI + + Q ++RI + G+R +
Sbjct: 641 WLETNQHVVELMTDPFGNYLCQKLLEYCNEEERTVLIQN---ASQDMVRIALNQHGTRAL 697
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QK+++ T EQ +++ +L+N V L + +GNHVI++CL K ++ +
Sbjct: 698 QKMIEFIN-------TDEQVQIIIESLRNRVVELIQDLNGNHVIQKCLNKLNCTQSQFIF 750
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ + ++ +D+ T R GCC+LQ CI A +QK LI + +A L + +GNYVVQYI+
Sbjct: 751 DAVGKSAIDVGTHRHGCCVLQRCIDHASGDQKVWLIQRITEHAVALVQDPFGNYVVQYII 810
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
L P T +V GR ALS K SSNV++KCL + + I EI+ EI +L
Sbjct: 811 DLNEPSFTEPLVGMFRGRISALSRHKFSSNVIEKCLRCAQDGSKDMIAEEILAPGEIERL 870
Query: 516 ILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ D + NYVIQTA + S + L D + P +++ YG+ + AK++ +R
Sbjct: 871 LRDSFANYVIQTALEYST-HYTKHRLVDAIRPILPNIRATPYGRRIQAKIQAFDSR 925
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 184/338 (54%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 598 RFGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 657
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 658 YLCQKLLEYSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 707
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q ++ AL+ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 708 QTQTVIKALRGRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCC 767
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 768 VLQRCIDHASGDQRARLIEQITKNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 827
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + +I E++ E+ +++ D + NYV+QTA D +
Sbjct: 828 IPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDFAD 887
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L D + P ++ +G+ + K+ +N+
Sbjct: 888 PDS-RNKLIDAIRPILPAIRQTPHGRRIAGKIMSAENQ 924
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 187/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 682 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 741
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 742 YLCQKLLEYSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 791
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 792 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCC 851
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A EQ+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 852 VLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 911
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + ++ E++ E+ +++ D + NYV+QTA D +
Sbjct: 912 IPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAMDFAD 971
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 972 P-EYRTKLIEAIRPILPAIRQTPHGRRIAGKILSVENQ 1008
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 189/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQKK++ERNP + MI +E + ELM N+L QKL
Sbjct: 340 LESFVGTIYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKL 399
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +Q +++
Sbjct: 400 LEFCNDDERTTLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQQVHIII 449
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL + PP + + + + NC+++ T R GCC+LQ CI
Sbjct: 450 EALRFRVVELIQDLNGNHVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCI 509
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QK LI + +A VL + +GNYVVQYI+ L P T +V LS
Sbjct: 510 DHASGDQKLWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSR 569
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL S I++E++R+ ++ +L+ D + NYVIQTA + + +
Sbjct: 570 HKFSSNVIEKCLRCSQPPSRDLIVDELLRNQDMERLLRDSFANYVIQTALEYAT-PHYKY 628
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ NR
Sbjct: 629 RLVEAIRPILPQIRTTPYGRRIQAKISAFDNR 660
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 187/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 603 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 662
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 663 YLCQKLLEYSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 712
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 713 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCC 772
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A EQ+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 773 VLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 832
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + ++ E++ E+ +++ D + NYV+QTA D +
Sbjct: 833 IPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAMDFAD 892
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 893 -PEYRTKLIEAIRPILPAIRQTPHGRRIAGKILSVENQ 929
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 195/352 (55%), Gaps = 13/352 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +E+L G I + KD+ GCR+LQKK++E P +MI E +LM N
Sbjct: 560 RFAGTRLEDLAGEIPSLCKDQHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGN 619
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ +EQ + SV + L+ I ++ G+R +QK++D TR+Q
Sbjct: 620 YLCQKLLEYSTDEQRNIICESVATD---LVNISLNMHGTRAVQKMIDF--LSTRRQTDHR 674
Query: 354 ---QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R
Sbjct: 675 YHGQIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 734
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A + Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 735 GCCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 794
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G ALS+ K SSNV++KC+ + +I+E++ + +L+ D YGNY +QTA D
Sbjct: 795 TGNVCALSVQKFSSNVIEKCIRVAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALD 854
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK----NRFHNRVAM 578
++ + R L D + P +++ YGK + K++ + FHN+ A+
Sbjct: 855 YAEPAQ-RALLVDGIRPVLPLIRNTPYGKRIQNKLQREQMDHFGGFHNQQAL 905
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 187/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 679 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 738
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 739 YLCQKLLEYSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 788
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 789 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCC 848
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A EQ+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 849 VLQRCIDHASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 908
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + ++ E++ E+ +++ D + NYV+QTA D +
Sbjct: 909 IPALSKQKFSSNVIEKCIRTADPQSRSSLVEEMLVPSELEKMLRDSFANYVVQTAMDFAD 968
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 969 -PEYRTKLIEAIRPILPAIRQTPHGRRIAGKILSVENQ 1005
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 188/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 352 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 411
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 412 YLCQKLLEFSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 461
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 462 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCC 521
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 522 VLQRCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 581
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + +++E++ E+ +++ D + NYV+QTA D +
Sbjct: 582 IPALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFAD 641
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 642 -PEYRTKLVEAIRPILPAIRQTPHGRRIAGKILSVENQ 678
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 194/342 (56%), Gaps = 11/342 (3%)
Query: 225 YARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
+ R +R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E
Sbjct: 549 HKRGEMELNRFAGTRLEDLQGEIPGLCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFA 608
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
+LM N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D
Sbjct: 609 DLMTDPFGNYLCQKLLEYATDEQRNLICESVA---QDLVNISLNMHGTRAVQKMIDF--L 663
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
TR+Q+ S++V AL V L K +GNHVI++CL K P+ + + +A NC++
Sbjct: 664 STRRQI----HSIIV-ALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVE 718
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
+AT R GCC+LQ CI A ++Q+ +L+ ++ NA L + YGNYVVQYIL L + +
Sbjct: 719 VATHRHGCCVLQRCIDHASDQQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSD 778
Query: 465 DVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
V+ Q G ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY
Sbjct: 779 GVIRQFTGNVCALSVQKFSSNVIEKCIRVAEHSTRKLLIEELLNRTRLEKLLRDSYGNYC 838
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+QTA D ++ + R L + + P +++ YGK + K++
Sbjct: 839 VQTALDYAEPGQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 879
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 189/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E++P ++MI E + ELM N
Sbjct: 232 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGN 291
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 292 YLCQKLLEFSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 341
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + E+C+ + T R GCC
Sbjct: 342 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGESCVPVGTHRHGCC 401
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 402 VLQRCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 461
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + +++E++ E+ +++ D + NYV+QTA D +
Sbjct: 462 IPALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFAD 521
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 522 -PEYRTKLVEAIRPILPAIRQTPHGRRIAGKILSVENQ 558
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 188/338 (55%), Gaps = 11/338 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 734 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 793
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 794 YLCQKLLEFSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 843
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++AL++ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 844 QTQTVINALRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCC 903
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 904 VLQRCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 963
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + +++E++ E+ +++ D + NYV+QTA D +
Sbjct: 964 ISALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFAD 1023
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 1024 P-EYRTKLVEAIRPILPAIRQTPHGRRIAGKILSVENQ 1060
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 192/340 (56%), Gaps = 6/340 (1%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E +LM
Sbjct: 23 NRFAGTRLEDLQGEIPALCKDQHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFG 82
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD--AGEYPTRQQL 350
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D + T +
Sbjct: 83 NYLCQKLLEYSTDEQRNIICESVA---QELVNISLNMHGTRAVQKMIDFLSTRRQTDGRY 139
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R
Sbjct: 140 NNHQIHSIILALSMHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 199
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A + Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 200 GCCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 259
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
AG ALS+ K SSNV++KC+ + +I+E++ + +L+ D YGNY +QTA D
Sbjct: 260 AGNVCALSVQKFSSNVIEKCIRVAEHNTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALD 319
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKN 570
++ + R L + + P +++ YGK + K++ +N
Sbjct: 320 YAEPAQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQREQN 358
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 189/336 (56%), Gaps = 9/336 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E +LM N
Sbjct: 569 RFAGTRLEDLQGEIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGN 628
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q +
Sbjct: 629 YLCQKLLEYSTDEQRNVICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQADPK 683
Query: 354 ---QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R
Sbjct: 684 YNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 743
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A + Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 744 GCCVLQRCIDHASDAQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 803
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D
Sbjct: 804 TGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALD 863
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ + R L + + P +++ YGK + K++
Sbjct: 864 YAEPSQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 898
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 181/326 (55%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E +G + + KD+ GCR+LQ+K++ERN +++I SE + ELM N+L QKL
Sbjct: 599 LEHYKGELYSLCKDQHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNYLCQKL 658
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + L++I + G+R +QK+++ P +Q ++
Sbjct: 659 LEYSNDEQRTALINNAAP---ELVKIALNQHGTRALQKMIEFISTP-------QQTQTVI 708
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ V L + +GNHVI++CL + P+ + + E + NC+ + T R GCC+LQ CI
Sbjct: 709 NALQYHVVDLVQDLNGNHVIQKCLNRLSPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCI 768
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QKARLI+ + ++++ L + +GNYVVQYIL L P T + A G LS
Sbjct: 769 DHASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSK 828
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + +I+E + E+ +++ D + NYV+QTA D R
Sbjct: 829 QKFSSNVIEKCLRTADNYMKREMIDEFLMGNELEKMLRDSFANYVVQTAMDFCD-LETRN 887
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + V P ++ +G+ + K+
Sbjct: 888 RIVEAVRPILPSIRQTPHGRRIAGKI 913
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L+G I + KD+ GCR+LQKK++E P +MI E ELM N+L QKL
Sbjct: 538 LEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFPELMTDPFGNYLCQKL 597
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q+ S++V
Sbjct: 598 LEYCTDEQRNLICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQI----HSIIV 648
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L K +GNHVI++CL K P+ + + +A NC+++AT R GCC+LQ C+
Sbjct: 649 -ALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCV 707
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q G ALS+
Sbjct: 708 DHASEPQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSV 767
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D ++ + R
Sbjct: 768 QKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPTQ-RA 826
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVR 566
L + + P +++ YGK + K++
Sbjct: 827 LLVEGIRPVLPLIRNTPYGKRIQNKLQ 853
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 193/342 (56%), Gaps = 17/342 (4%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E + G I + KD+ GCR+LQK+++ RNP + MI E + ELM
Sbjct: 644 NRYNNTPLEAVGGTIYELCKDQHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFG 703
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+++ T LI + Q ++RI + G+R +QK++ E+ + T+
Sbjct: 704 NYLCQKLLEYCNDDERTVLIQNAA---QDMVRIALNQHGTRALQKMI---EFIS----TE 753
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q +++ AL++ V L K +GNHVI++CL K P + + + + C+++ T R GC
Sbjct: 754 AQVQIIIEALRHCVVDLIKDLNGNHVIQKCLNKLTPANAQFIFDAVGGACVEVGTHRHGC 813
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A +QK LI + A L + YGNYVVQYI+ L T +VA+ G
Sbjct: 814 CVLQRCIDHASGDQKVWLIQRITEEAVTLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRG 873
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
R +LS K SSNVV+KCL S E I+ E++ E+ +L+ D Y NYV+QTA + +
Sbjct: 874 RICSLSRHKFSSNVVEKCLRCSLEPSRDMIVEEVLNSGEVERLVRDSYANYVVQTALEYA 933
Query: 533 QGRRIRQTLYDLVVDNSPFL---QSHMYGKNVLAKVRGNKNR 571
++ L D + PFL +S +G+ + AK++ +R
Sbjct: 934 T-PYMKARLVDSI---RPFLAQIRSTPHGRRIQAKIQAYDSR 971
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 191/331 (57%), Gaps = 13/331 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+SIE+L G I + +D+ GCRFLQKK+++ + E+I EV + + ELM N+L
Sbjct: 1019 YTSIEQLTGSIYPLCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLC 1078
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ N+ Q +I V ++RI ++ G+R +QK++ E+ T T EQ +
Sbjct: 1079 QKLLEHCNDRQRLMIIDKVGPD---IVRISMNMHGTRAVQKMI---EFLT----TPEQIA 1128
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCL 414
L+ +L N V L + +GNHVI++CL K P + + + ++ NC+ +AT R GCC+
Sbjct: 1129 LIKKSLANYVVPLIQDLNGNHVIQKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCV 1188
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI A E QK +LI +V++N+ VL + +GNYVVQY+L L P + ++ + G
Sbjct: 1189 LQRCIDHASESQKFQLINEVISNSLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNV 1248
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
L+ K SSNVV+KCL + +I EII + L+ DP+ NYVIQT+ +++
Sbjct: 1249 PILATQKFSSNVVEKCLHVADPMTRGNLIQEIIDCDILHNLLQDPFANYVIQTSLTIAEP 1308
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + P L++ YGK + K+
Sbjct: 1309 HQ-HTKLVEAIRPHLPMLKNTPYGKRIQNKI 1338
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 188/335 (56%), Gaps = 17/335 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E++ G I + KD+ GCR+LQK+++ R P I MI E + ELM N+L QKL
Sbjct: 371 LEQVGGTIYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKL 430
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ ++++ T LI + S ++ I + G+R +QK+++ TQ Q +L+V
Sbjct: 431 LEYCSDDERTVLIQNAAPS---MVSIALNQHGTRALQKMIE-------HVTTQVQINLIV 480
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+N V L + +GNHVI++CL K + + + ++C+++ T R GCC+LQ CI
Sbjct: 481 EALRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCI 540
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK L+ + +A L + +GNYVVQYI+ L T +V Q GR LS
Sbjct: 541 DHADGNQKVWLVECITEHAVTLVQDPFGNYVVQYIIDLNEATFTEPLVKQFEGRIAQLSK 600
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QGRR 536
K SSNVV+KCL + +E I++E++ EI +L+ D +GNYVIQTA D S R
Sbjct: 601 HKFSSNVVEKCLRCASDESRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYSTPISKHR 660
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ + + L+ P +++ YG+ + AK++ NR
Sbjct: 661 LIEAIRPLL----PSVRATPYGRRIQAKIQAYDNR 691
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 196/338 (57%), Gaps = 23/338 (6%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S++S+ E RG + L+A+D+ GC FLQK +E D+E+I E+I + ELM N++
Sbjct: 4 SFTSLNEFRGYVYLMAQDQNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYV 63
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V +E+ ++ + + L+RIC + G+RV+Q+L++ TRQQ++
Sbjct: 64 VQKLLDVCDEKHRLLIVRMITNEPGMLVRICLNTYGTRVVQRLIET--LKTRQQISS--- 118
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
++ ALK + L K +GNHVI+RCL + K + + + C+++AT R GCC++
Sbjct: 119 --VILALKPGVLDLVKDQNGNHVIQRCLNLLSNEDNKFIFDAATKFCVEIATHRHGCCVM 176
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI A + +L+ ++ N +L++ +GNYVVQYI+ LK A +++Q G Y
Sbjct: 177 QRCIAHATGKHWDKLMTEISRNGLLLAQDPFGNYVVQYIMDLKNSCSIAILLSQFKGNYV 236
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K S+VV++C L EE + I+ E++ P QL+ DP+ NYVIQ A V++G
Sbjct: 237 HLSMQKFGSHVVERC-LGHFEESRSQIVLELLSVPRFEQLLQDPFANYVIQCALAVTKG- 294
Query: 536 RIRQTLYDLVVD---------NSPFLQSHMYGKNVLAK 564
L+ L+V+ SP+ + ++ +N+L K
Sbjct: 295 ----ALHSLLVEAVRPHSTLRTSPYCK-RIFSRNLLKK 327
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 181/326 (55%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
IE R I + KD+ GCR+LQ+K++ERN ++MI +E + ELM N+L QKL
Sbjct: 234 IEYYRNEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKL 293
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T L+ +L++I + G+R +QK+++ T+EQ ++
Sbjct: 294 LEYSNDEQRTVLVNKAAP---QLVKIALNQHGTRALQKMIEFIS-------TEEQTQTVI 343
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
ALK+ V L + +GNHVI++CL + + ++ + + + C+ + T R GCC+LQ CI
Sbjct: 344 DALKDHVVELVQDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCI 403
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A Q+ARLI + NA+ L + +GNYVVQYIL L + T + + R LS
Sbjct: 404 DHASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSK 463
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + EE +I E++ E+ +++ D Y NYV+QTA D + R
Sbjct: 464 HKFSSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTAMDYAD-PATRA 522
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + P L+ +G+ + +K+
Sbjct: 523 RIVKYIEPILPSLRGTPHGRRIGSKI 548
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 188/336 (55%), Gaps = 9/336 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E +LM N
Sbjct: 115 RFAGTRLEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGN 174
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT-- 351
+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q
Sbjct: 175 YLCQKLLEYSTDEQRNVICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQTDVR 229
Query: 352 -QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R
Sbjct: 230 YNTQIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 289
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A + Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 290 GCCVLQRCIDHASDHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 349
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D
Sbjct: 350 TGNVCALSVQKFSSNVIEKCIRVAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTALD 409
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ + R L D + P +++ YGK + K++
Sbjct: 410 YAEPAQ-RALLVDGIRPVLPLIRNTPYGKRIQNKLQ 444
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 194/358 (54%), Gaps = 31/358 (8%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR+NN +E + G I + KD+ GCR+LQK+++ R P + MI
Sbjct: 581 AMSRFNNL--------------PLESVGGTIYELCKDQHGCRYLQKQLEGRVPDQVHMIW 626
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E + ELM N+L QKL+ NEE+ T LI + + Q ++RI + G+R +Q
Sbjct: 627 LETNQHVVELMTDPFGNYLCQKLLEFCNEEERTVLIQN---ASQDMVRIALNQHGTRALQ 683
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K+++ T+EQ +++ +L++ V L + +GNHVI++CL K +++ + +
Sbjct: 684 KMIEFIN-------TEEQVQIIIESLRDRVVELIQDLNGNHVIQKCLNKLSCLHSQFIFD 736
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ +++ T R GCC+LQ CI A +QK LIA + +A L + +GNYVVQYI+
Sbjct: 737 AVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITEHAVTLVQDPFGNYVVQYIID 796
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L P T +V GR LS K SSNV++KCL S + I EI+ EI +LI
Sbjct: 797 LNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSADVSKDMIAEEILAPGEIERLI 856
Query: 517 LDPYGNYVIQTAWDVS---QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
D + NYVIQTA + S R+ +T+ ++ P ++S YG+ + AK++ NR
Sbjct: 857 RDSFANYVIQTALEYSTPMTKHRLVETIRPIL----PTVRSTPYGRRIQAKIQAFDNR 910
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 229/459 (49%), Gaps = 37/459 (8%)
Query: 135 PTSFPLENHETIDLQSGFDLQSGFEGLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNAS 194
P +F LQS +D+ S + LN DG R N + N + N TT ++
Sbjct: 435 PLTFGTPQSLDNSLQSQYDVDSIY--LNQDG----RLNGYGLDGN--SRLNGSGTTGGST 486
Query: 195 PSYSNLSHGFLSDHHH-------LGSSTNASSRYNNFYARARHHH-----HRTSYSSIEE 242
Y HHH +G+ S N +H +R + + +E+
Sbjct: 487 ALY----------HHHGSRYGLAMGARMGGSDNKMNGLHGPKHKRGDIDLNRFAGTRLED 536
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L+G I + KD+ GCR+LQKK++E N +MI E ELM N+L QKL+
Sbjct: 537 LQGEIASLCKDQHGCRYLQKKLEEGNAEHRDMIFRETFGHFAELMTDPFGNYLCQKLLEY 596
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ--SLLVS 360
++Q + SV Q L+ I ++ G+R +QK++D + L Q S++V
Sbjct: 597 STDDQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTQRQADLRYNAQIHSIIV- 652
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
AL V L K +GNHVI++CL K P+ + + +A NC+++AT R GCC+LQ CI
Sbjct: 653 ALSLHVVVLIKDLNGNHVIQKCLNKLTPEDNQFIYNAVAANCVEVATHRHGCCVLQRCID 712
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
A + Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q G ALS+
Sbjct: 713 HASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQ 772
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
K SSNV++KC+ + +I E++ + +L+ D +GNY +QTA D ++ + R
Sbjct: 773 KFSSNVIEKCIRVAEHNTRKMLIEELLNRTRLEKLLRDSFGNYCVQTALDYAESGQ-RAL 831
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAMW 579
L + + P +++ YGK + +K++ + N M
Sbjct: 832 LVEGIRPILPLIRNTPYGKRIQSKLQREQMELANANGMG 870
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 22/383 (5%)
Query: 194 SPSYSNLSHGF-LSDHHHLGSSTNASSRYNNFYARARH----------HHHRTSYSSIEE 242
SP SN +HGF L+ A SR+ AR R + +E+
Sbjct: 542 SPMQSNGNHGFVLTSQPPFAQPFQAYSRFLENPARVGQVRRNGEAEAGAFSRFANVPLEQ 601
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
RG + + KD+ GCR+LQ+K++ER P +++MI E + ELM N+L QKL+
Sbjct: 602 YRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEF 661
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
N+EQ T LI + +L+ I + G+R +QK+++ P EQ ++ AL
Sbjct: 662 SNDEQRTALINNAAP---QLVSIALNQHGTRALQKMIEFISTP-------EQTQTVIKAL 711
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
++ V L + +GNHVI++CL + + + + + +C+ + T R GCC+LQ CI A
Sbjct: 712 RDKVVDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHA 771
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+Q+A+LIA + A++Y L + +GNYVVQYIL L P+ T + G+ LS K
Sbjct: 772 SGDQRAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKF 831
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SSNV++KCL + + +I E++ E+ +++ D + NYV+QTA D + R L
Sbjct: 832 SSNVIEKCLRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYAD-PETRVALI 890
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ V P ++ +G+ + K+
Sbjct: 891 EAVRPILPSIRQTPHGRRIAGKI 913
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 22/383 (5%)
Query: 194 SPSYSNLSHGF-LSDHHHLGSSTNASSRYNNFYARARH----------HHHRTSYSSIEE 242
SP SN +HGF L+ A SR+ AR R + +E+
Sbjct: 542 SPMQSNGNHGFVLTSQPPFAQPFQAYSRFLENPARVGQVRRNGETEAGAFSRFANVPLEQ 601
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
RG + + KD+ GCR+LQ+K++ER P +++MI E + ELM N+L QKL+
Sbjct: 602 YRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEF 661
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
N+EQ T LI + +L+ I + G+R +QK+++ P EQ ++ AL
Sbjct: 662 SNDEQRTALINNAAP---QLVSIALNQHGTRALQKMIEFISTP-------EQTQTVIKAL 711
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
++ V L + +GNHVI++CL + + + + + +C+ + T R GCC+LQ CI A
Sbjct: 712 RDKVVDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHA 771
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+Q+A+LIA + A++Y L + +GNYVVQYIL L P+ T + G+ LS K
Sbjct: 772 SGDQRAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKF 831
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SSNV++KCL + + +I E++ E+ +++ D + NYV+QTA D + R L
Sbjct: 832 SSNVIEKCLRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYAD-PETRVALI 890
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ V P ++ +G+ + K+
Sbjct: 891 EAVRPILPSIRQTPHGRRIAGKI 913
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 22/383 (5%)
Query: 194 SPSYSNLSHGF-LSDHHHLGSSTNASSRYNNFYARARH----------HHHRTSYSSIEE 242
SP SN +HGF L+ A SR+ AR R + +E+
Sbjct: 522 SPMQSNGNHGFVLTSQPPFAQPFQAYSRFLENPARVGQVRRNGEAEAGAFSRFANVPLEQ 581
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
RG + + KD+ GCR+LQ+K++ER P +++MI E + ELM N+L QKL+
Sbjct: 582 YRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEF 641
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
N+EQ T LI + +L+ I + G+R +QK+++ P EQ ++ AL
Sbjct: 642 SNDEQRTALINNAAP---QLVSIALNQHGTRALQKMIEFISTP-------EQTQTVIKAL 691
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
++ V L + +GNHVI++CL + + + + + +C+ + T R GCC+LQ CI A
Sbjct: 692 RDKVVDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHA 751
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+Q+A+LIA + A++Y L + +GNYVVQYIL L P+ T + G+ LS K
Sbjct: 752 SGDQRAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKF 811
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SSNV++KCL + + +I E++ E+ +++ D + NYV+QTA D + R L
Sbjct: 812 SSNVIEKCLRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYAD-PETRVALI 870
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ V P ++ +G+ + K+
Sbjct: 871 EAVRPILPSIRQTPHGRRIAGKI 893
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 194/358 (54%), Gaps = 31/358 (8%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR+NN +E + G I + KD+ GCR+LQK+++ R P + MI
Sbjct: 339 AMSRFNNL--------------PLESVGGTIYELCKDQHGCRYLQKQLEGRVPDQVHMIW 384
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E + ELM N+L QKL+ NEE+ T LI + + Q ++RI + G+R +Q
Sbjct: 385 LETNQHVVELMTDPFGNYLCQKLLEFCNEEERTVLIQN---ASQDMVRIALNQHGTRALQ 441
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K+++ T+EQ +++ +L++ V L + +GNHVI++CL K +++ + +
Sbjct: 442 KMIEFIN-------TEEQVQIIIESLRDRVVELIQDLNGNHVIQKCLNKLSCLHSQFIFD 494
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ +++ T R GCC+LQ CI A +QK LIA + +A L + +GNYVVQYI+
Sbjct: 495 AVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITEHAVTLVQDPFGNYVVQYIID 554
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L P T +V GR LS K SSNV++KCL S + I EI+ EI +LI
Sbjct: 555 LNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSADVSKDMIAEEILAPGEIERLI 614
Query: 517 LDPYGNYVIQTAWDVS---QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
D + NYVIQTA + S R+ +T+ ++ P ++S YG+ + AK++ NR
Sbjct: 615 RDSFANYVIQTALEYSTPMTKHRLVETIRPIL----PTVRSTPYGRRIQAKIQAFDNR 668
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 191/345 (55%), Gaps = 13/345 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E+L G I + KD+ GCR+LQKK++E P +MI E +LM
Sbjct: 522 NRFAGTRLEDLVGEIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFG 581
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL-- 350
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q
Sbjct: 582 NYLCQKLLEYSTDEQRNVICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQTDL 636
Query: 351 -TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
Q ++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R
Sbjct: 637 RCNGQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHR 696
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GCC+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 697 HGCCVLQRCIDHASEHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQ 756
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAW 529
G ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA
Sbjct: 757 FTGNVCALSVQKFSSNVIEKCVRVAEHNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 816
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
D ++ + R L + + P +++ YGK + K++ R HN
Sbjct: 817 DYAEPAQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ----REHN 856
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 182/326 (55%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
IE R I + KD+ GCR+LQ+K++ERN ++MI +E + ELM N+L QKL
Sbjct: 586 IEYYRNEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKL 645
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T L V + +L++I + G+R +QK+++ T+EQ ++
Sbjct: 646 LEYSNDEQRTVL---VNKAAPQLVKIALNQHGTRALQKMIEFIS-------TEEQTQTVI 695
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
ALK+ V L + +GNHVI++CL + + ++ + + + C+ + T R GCC+LQ CI
Sbjct: 696 DALKDHVVELVQDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCI 755
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A Q+ARLI + NA+ L + +GNYVVQYIL L + T + + R LS
Sbjct: 756 DHASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSK 815
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + EE +I E++ E+ +++ D Y NYV+QTA D + R
Sbjct: 816 HKFSSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTAMDYAD-PATRA 874
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + P L+ +G+ + +K+
Sbjct: 875 RIVKYIEPILPSLRGTPHGRRIGSKI 900
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 189/337 (56%), Gaps = 19/337 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ RG+I + KD+ GCR+LQKK++ERN + MI E + ELM N+L QKL
Sbjct: 321 LDSFRGQIYELCKDQHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKL 380
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + QR+ I + G+R +QK++ EY + T +Q L++
Sbjct: 381 LEFCNDDERTVLIQN---ASQRMEDIALNQHGTRALQKMI---EYVS----TPQQIHLII 430
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDLATDRSGCCLLQY 417
AL+N V L K +GNHVI++CL K + + + + + C+++ T R GCC+LQ
Sbjct: 431 EALRNRVVKLIKDLNGNHVIQKCLNKLTATDAQFIFDAVGNGDKCVEVGTHRHGCCVLQR 490
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI A EQK LI + +A +L + +GNYVVQYI+ L P T +V G L
Sbjct: 491 CIDHATGEQKLWLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQL 550
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QG 534
S K SSNV++KCL + I+ E++ PE+ +L+ D + NYVIQTA + S Q
Sbjct: 551 SRHKFSSNVIEKCLRCAQAPSKDMIVEELLSQPEMERLLRDSFANYVIQTALEFSTPHQK 610
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R+ + + ++ P +++ +G+ + AK+ NR
Sbjct: 611 YRLVEAIRPIL----PQIRTTPHGRRIQAKIAAYDNR 643
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 187/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E + G+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 441 LEHVGGQIYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKL 500
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + Q ++RI + G+R +QK++ E+ T T Q +++
Sbjct: 501 LEYCNDDERTVLIQNAA---QDMVRIALNQHGTRALQKMI---EFVT----TSIQVQMII 550
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + +C+D+ T R GCC+LQ CI
Sbjct: 551 DALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCI 610
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK LI + +A VL + +GNYVVQYI+ L P T VV R LS
Sbjct: 611 DHADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSR 670
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++K L S + I++E+++ E+ +L+ D Y NYVIQTA + + +
Sbjct: 671 HKFSSNVIEKLLRCSQAQGRDMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEG-KH 729
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ +++ P ++S YG+ + AKV+ +R
Sbjct: 730 RMVEVIRPFLPAVRSTPYGRRIQAKVQAYDSR 761
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
Q Q+L + + L K HG +++ L++ PD + E ++ ++L TD G
Sbjct: 434 QRYQNLPLEHVGGQIYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFG 493
Query: 412 --CC--LLQYC------------------IPLAQEEQKA--RLIADVVANAYV------- 440
C LL+YC I L Q +A ++I V + V
Sbjct: 494 NYLCQKLLEYCNDDERTVLIQNAAQDMVRIALNQHGTRALQKMIEFVTTSIQVQMIIDAL 553
Query: 441 ------LSEHSYGNYVVQYILG-LKIP--QVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
L + GN+V+Q L L P Q D V G C V+Q+C+
Sbjct: 554 RYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCC---VLQRCI 610
Query: 492 LESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPF 551
+ Q +I +I H + L+ DP+GNYV+Q D+++ + + + +
Sbjct: 611 DHADGAQKVWLIGKITEHAPV--LVQDPFGNYVVQYIIDLNE-PAFTEPVVGMFRNRICQ 667
Query: 552 LQSHMYGKNVLAKV 565
L H + NV+ K+
Sbjct: 668 LSRHKFSSNVIEKL 681
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 187/334 (55%), Gaps = 11/334 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + +E+++G + + KD+ GCRFLQKK++E P +MI +E+ ELM
Sbjct: 3 NRFANIRLEDMQGDMFGLCKDQHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFG 62
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ +EQ LI S+ L+ I ++ G+R +QK++D TQ
Sbjct: 63 NYLSQKLLEYSTDEQRDLLIESISGE---LVSISLNMHGTRAVQKMIDFLS-------TQ 112
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q L+ AL V+L K +GNHVI++CL PP+ + + +A NC+++AT R GC
Sbjct: 113 RQVQSLIIALNLNVVTLIKDLNGNHVIQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGC 172
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ N+ L + +GNYVVQY+L L + +V Q G
Sbjct: 173 CVLQRCIDHASESQRIQLVTEITYNSLSLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLG 232
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNVV+KC+ S ++ E+ + +L+ D + NYV+QTA D S
Sbjct: 233 NVCALSMQKFSSNVVEKCIRVSDPAGRRALVEELSGRQRLERLLRDSFANYVVQTALDYS 292
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ R L D + P +++ YGK + +K++
Sbjct: 293 DPAQ-RAQLVDNIRPILPMIRNTPYGKRIQSKIQ 325
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 187/332 (56%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E + G+I + KD+ GCR+LQKK++ERNP + MI E + ELM N+L QKL
Sbjct: 762 LEHVGGQIYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKL 821
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + Q ++RI + G+R +QK++ E+ T T Q +++
Sbjct: 822 LEYCNDDERTVLIQNAA---QDMVRIALNQHGTRALQKMI---EFVT----TSIQVQMII 871
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + +C+D+ T R GCC+LQ CI
Sbjct: 872 DALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCI 931
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A QK LI + +A VL + +GNYVVQYI+ L P T VV R LS
Sbjct: 932 DHADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSR 991
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++K L S + I++E+++ E+ +L+ D Y NYVIQTA + + +
Sbjct: 992 HKFSSNVIEKLLRCSQAQGRDMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEG-KH 1050
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ +++ P ++S YG+ + AKV+ +R
Sbjct: 1051 RMVEVIRPFLPAVRSTPYGRRIQAKVQAYDSR 1082
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 102/255 (40%), Gaps = 48/255 (18%)
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
Q Q+L + + L K HG +++ L++ PD + E ++ ++L TD G
Sbjct: 755 QRYQNLPLEHVGGQIYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFG 814
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL- 470
L Q + ++++ LI + + ++ + +G +Q ++ VT + Q+
Sbjct: 815 NYLCQKLLEYCNDDERTVLIQNAAQDMVRIALNQHGTRALQKMIEF----VTTSIQVQMI 870
Query: 471 --AGRYFALSL----------GKCSSN----------------------------VVQKC 490
A RY + L KC + V+Q+C
Sbjct: 871 IDALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRC 930
Query: 491 LLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSP 550
+ + Q +I +I H + L+ DP+GNYV+Q D+++ + + + +
Sbjct: 931 IDHADGAQKVWLIGKITEHAPV--LVQDPFGNYVVQYIIDLNE-PAFTEPVVGMFRNRIC 987
Query: 551 FLQSHMYGKNVLAKV 565
L H + NV+ K+
Sbjct: 988 QLSRHKFSSNVIEKL 1002
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 192/337 (56%), Gaps = 14/337 (4%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + + +E L G I + KD+ GCR+LQKK++ERNP ++MI E + ELM
Sbjct: 585 NRFANTPLESLTGNIYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFG 644
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ N+EQ T L V ++ +L++I + G+R +QK++ EY T T
Sbjct: 645 NYLCQKLLEYANDEQRTVL---VNTAAPQLVKIALNQHGTRALQKMI---EYIT----TP 694
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK--DLLEEIAENCLDLATDRS 410
EQ ++ AL++ V L + +GNHVI++CL ++ + K + + + E+C+ + T R
Sbjct: 695 EQICTVIHALQSKVVELIQDLNGNHVIQKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRH 754
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A QK +LI + A+A L +GNYVVQYIL L P ++ ++ +
Sbjct: 755 GCCVLQRCIDHAAGAQKVKLIQKITAHAIELVVDPFGNYVVQYILDLADPMLSEPLILKF 814
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-RHPEIVQLILDPYGNYVIQTAW 529
GR LS K SSNV++KC+ + +I E++ E+ L+ D Y NYVIQTA
Sbjct: 815 RGRVCELSKQKFSSNVIEKCIRVAEPPTKKILIEEMLPNQAELEALLRDSYANYVIQTAM 874
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D + +Q L D + P ++ YG+ + +K++
Sbjct: 875 DYAS-PETKQQLVDSIRPILPAIRMTPYGRRIQSKIQ 910
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 190/335 (56%), Gaps = 13/335 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + S +E+L G I L+ KD+ GCRFLQKK++E P ++I E ELM
Sbjct: 512 NRYASSRLEDLIGEIPLMCKDQHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFG 571
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ +EQ + SV L+ I ++ G+R +QK++D TQ
Sbjct: 572 NYLCQKLLEYSTDEQRNLICESVAGD---LVTISLNMHGTRAVQKMIDF-------LSTQ 621
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++ AL V+L K +GNHVI++CL + P+ + + +A +C+++AT R GC
Sbjct: 622 RQIVAIIRALSLHVVTLIKDLNGNHVIQKCLNRLVPEDNQFIYNAVATHCVEVATHRHGC 681
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C+LQ CI A E Q+ +L+ ++ +A L + YGNYVVQYIL L + + V+ Q G
Sbjct: 682 CVLQRCIDHASETQRLQLVTEITYHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFG 741
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS+ K SSNV++KC+ + +I E++ + +L+ D +GNY +QTA D +
Sbjct: 742 NVCALSVQKFSSNVIEKCIRVAEHNTRKLLIEELLNRSRLEKLLRDSFGNYCVQTALDYA 801
Query: 533 Q-GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ G+R+ L + + P +++ YGK + +K++
Sbjct: 802 EPGQRM--LLVEGIRPILPLIRNTPYGKRIQSKLQ 834
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 203/332 (61%), Gaps = 19/332 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+AKD+ GCR LQK V+E +D ++I E+ID + EL N+++QK
Sbjct: 247 SMVEIYGSVNLMAKDQIGCRVLQKLVEEGTVLDAKVIFHEIIDHVVELSMDPFGNYIVQK 306
Query: 299 LIGVLNEEQMTKLILSVVSSQQR-LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L+ V +EEQ T LI+SV++S+ R L++IC + G+RV+QK+++ + T++Q +L
Sbjct: 307 LLEVSDEEQRT-LIVSVLTSKPRELIQICLNTYGTRVVQKMIETVK-------TKQQIAL 358
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ LK ++L K +GNHVI+ CLQ P+ K +LE + C ++A R GCC+LQ
Sbjct: 359 VKFGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNKFVLEAATKYCAEIAIHRHGCCVLQC 418
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ + Q+ RL+A++ NA LS+ +GNYVVQY++ ++ V ++ + Y L
Sbjct: 419 CLSNSVGLQRERLVAEISRNALHLSQDPFGNYVVQYLIEQQVSAV--KLLVRFRMHYAEL 476
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+ K SS+V++KCL + E ++ I+ E+I P L+ DPY NYVIQTA V++G +
Sbjct: 477 ATQKFSSHVIEKCLRKYPESRAE-IVRELICVPNFEYLLQDPYANYVIQTALSVTKG-PV 534
Query: 538 RQTLYDLV-----VDNSPFLQSHMYGKNVLAK 564
R L + V + +SP+ + ++ K +L K
Sbjct: 535 RAKLVEKVYRFGKLRSSPYCKK-IFSKTILKK 565
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 218/417 (52%), Gaps = 16/417 (3%)
Query: 150 SGFDLQSGFEGLNIDGL-GLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDH 208
SGF LQ D L G+ PN + N A A A +Y G+ S
Sbjct: 357 SGFSLQDNARPYGADPLYGMFVPNTAPLPLNSAIAA---AFVPGAYDNYGFDDDGYGSGA 413
Query: 209 HHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERN 268
+ G S N A A +R + IE+L+G ++++ KD+ GCR+LQ+K++E +
Sbjct: 414 LYPGGSIG----LKNKRADADREFNRFAGVRIEDLQGELLMLCKDQHGCRYLQRKLEEGD 469
Query: 269 PIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDD 328
+MI E ELM N+L QKL+ +EQ + +I SV + L+ I +
Sbjct: 470 AGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYSTDEQRSAIIDSVAND---LVAISLN 526
Query: 329 LSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP 388
+ G+R +QK++D P RQ +Q L+ AL V+L K +GNHVI++CL K P
Sbjct: 527 MHGTRAVQKMVDFLSAP-RQA---KQIRTLIYALSMNVVALIKDLNGNHVIQKCLNKLCP 582
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + IA N +++AT R GCC+LQ I A Q+ +L+ +++ N+ L + +GN
Sbjct: 583 EDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFNSLYLVQDPFGN 642
Query: 449 YVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR 508
YV+QYIL L + + ++ G +LS+ K SSNVV+KC+ + E +++E++
Sbjct: 643 YVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPEVRKSLVSEVLN 702
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +L+ D YGNYVIQT D + + R L + + P +++ YGK + +K+
Sbjct: 703 RSRLEKLLRDSYGNYVIQTILDYCELSQ-RMVLVECIRPILPSIRNTPYGKRIQSKL 758
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 202/336 (60%), Gaps = 14/336 (4%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
++S + + +G I +AKD+ GCRFLQ+ +DE D+ ++ + VIDD+ ELM N+L
Sbjct: 300 NFSPLAKFQGYIYYLAKDQNGCRFLQRMIDEGTSEDVLVLFNGVIDDVVELMIDPFGNYL 359
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V E++ +++ + +L++ +L G+RV+QKL+ + +++Q
Sbjct: 360 VQKLLDVCGEDERLQVVSMLTEEPGQLVKTSLNLHGTRVVQKLITTVD-------SRKQI 412
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
++L SA+++ ++L K +GNHVI+RCLQ F + + + C+++AT + GCC+L
Sbjct: 413 AMLRSAIQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVL 472
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + + K L+ ++ + ++L++ +GNYVVQYI+ ++ P + + +Q G Y
Sbjct: 473 QRCIDYSTGKYKDMLVKEICRHGHLLAQDPFGNYVVQYIIEMENPSASLKLHSQFKGNYA 532
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SS+VV+KCL+ E +S I+ E+ P + +L+ DPY NYV+Q A V++G
Sbjct: 533 NLSMQKFSSHVVEKCLVHIVEIRSR-IVQELSSFPHLERLLQDPYANYVVQRALGVTKG- 590
Query: 536 RIRQTLYDLVVDNSPF--LQSHMYGKNVLAKVRGNK 569
+ +L + V P+ L+S Y K + ++ NK
Sbjct: 591 SLHASLAEAV---RPYKTLRSSPYCKRIFSRSLLNK 623
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 170/578 (29%), Positives = 271/578 (46%), Gaps = 68/578 (11%)
Query: 28 TSQQSHVASQNLHLIPIYQKPNQQDYHVEN-PSLQNPTTQDQLSG--------HLHYSNY 78
+S ++ ASQ +H P Q Y + P+++NP ++G H H N
Sbjct: 96 SSNEASGASQAIHAPPKLQS----SYSANDIPTVKNPAGSSMMNGSANNHAQQHFHNHNA 151
Query: 79 PYDK--SLAMEPSTCRCRTPESGLSRPSQFAAPRPPLSQYL-----PY-PIPLNQAQYSF 130
+ + AM R + ++G++ AA P ++ L P+ P A ++
Sbjct: 152 SIGRIPAGAMPTRHARELSNDNGINASRDQAAVFPSINSALQASAAPFGPTMATTAPHTA 211
Query: 131 I--NSLPTSFPLENHETIDLQSGFDLQSGFEGLNIDGLGLPRPNNLTV---QRNLVAATN 185
+ P S P T GF +GF + ++L+ Q NL A N
Sbjct: 212 TPHATAPVSSPSSTAPTNPYGGGFYQPNGFSSPSTTSSPSYGAHSLSTGMQQMNLNGAGN 271
Query: 186 RYATTNNASPSYSNLSH---GFLSD------HHHLGSSTNASSRYNNFYARARHHHHRTS 236
A + + YSN+ + G D H A SRY N
Sbjct: 272 GSAYSPQSYSPYSNVPYPQNGQPRDSQARVIQHRRQLDNEAMSRYQNM------------ 319
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+E RG+I + KD+ GCR+LQKK++ER + MI E + ELM N+L
Sbjct: 320 --PLESFRGQIYELCKDQHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLC 377
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ N+++ T LI + + + ++RI + G+R +QK++ EY + T +Q
Sbjct: 378 QKLLEFCNDDERTVLIQN---ASKDMVRIALNQHGTRALQKMI---EYVS----TPQQVH 427
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L++ AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ
Sbjct: 428 LIIEALRFRVVELIQDLNGNHVIQKCLNKLTASDAQFIFDAVGNNCVEVGTHRHGCCVLQ 487
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A +QK LI + +A +L + +GNYVVQYI+ L P T +VA G
Sbjct: 488 RCIDHATGQQKLWLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQ 547
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---Q 533
LS K SSNV++KCL + I+ EI+ E+ + + D + NYVIQTA D S Q
Sbjct: 548 LSRHKFSSNVIEKCLRCAQAPSKDMIVEEILN--EMERFLRDSFANYVIQTALDFSTPHQ 605
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R+ + + ++ P +++ YG+ + AK+ NR
Sbjct: 606 KYRLVEAIRPIL----PQVRTTPYGRRIQAKIAAYDNR 639
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 179/298 (60%), Gaps = 8/298 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ S+ + + I +AKD+ GCRFLQ+ VDE DI ++ +I ++ ELM N+L+
Sbjct: 331 FYSVPDAQCYIYNLAKDQNGCRFLQRMVDEGTYQDICIVFEGIIGNVVELMIDSFGNYLV 390
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V ++Q+ +++L + + +L+RI + G+RV+QKL++ + EQ S
Sbjct: 391 QKLLDVCTDDQLLQIVLLLTNHPTQLVRISLNTHGTRVVQKLIET-------LTSDEQVS 443
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L+ SA++ + L K +GNHVI+RCLQ F + + + + C+++AT R GCC+LQ
Sbjct: 444 LVKSAIQPGFLDLIKDLNGNHVIQRCLQCFSCQDNQFIFDAAVKFCVEIATHRHGCCVLQ 503
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + + + +L+ ++ + +L++ ++GNYVVQY++ P V+ +++Q G +
Sbjct: 504 CCIHHSTGKNRDKLVTEICKHGLLLAQDAFGNYVVQYVIESDTPAVSVKLLSQFKGSFVI 563
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS K SS+VV+KCL G + I+ E+ P QL+ DPY NYVI++A ++G
Sbjct: 564 LSTQKFSSHVVEKCLKHIGNSRPR-IVGELTSVPRFEQLLQDPYANYVIRSALLFTKG 620
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 205/374 (54%), Gaps = 11/374 (2%)
Query: 194 SPSYSNLSHGFLSDHHHLGS-STNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAK 252
+P + +GF D + GS S N A +R + IE+L+G ++ + K
Sbjct: 397 TPQVAYDPYGFDEDGYGSGSLYPGGSMGLKNKRADQDREFNRFAGVRIEDLKGELLSLCK 456
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ GCR+LQKK+++ +P +MI +E ELM N+L QKL+ EEQ + +I
Sbjct: 457 DQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAII 516
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
SV + L+ I ++ G+R +QK++D P + + Q L+ AL V+L K
Sbjct: 517 DSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPK----QIRTLILALSMNVVALIKD 569
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++CL K P+ + + IA N +++AT R GCC+LQ I A Q+ +L+
Sbjct: 570 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 629
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
+++ N+ L + +GNYV+QYIL L + + ++ G +LS+ K SSNVV+KC+
Sbjct: 630 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 689
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ-GRRIRQTLYDLVVDNSPF 551
+ E ++ E++ + +L+ D YGNYVIQT D + G+R+ L + + P
Sbjct: 690 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRM--VLVECIRPILPS 747
Query: 552 LQSHMYGKNVLAKV 565
+++ YGK + +K+
Sbjct: 748 IRNTPYGKRIQSKL 761
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 187/342 (54%), Gaps = 13/342 (3%)
Query: 227 RARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
R + +T Y+S + +L G I + KD+ GCR+LQ+K+DER +E++ E+ D +
Sbjct: 698 RLANEEAQTRYNSLTVGQLTGEIYSLCKDQHGCRYLQRKLDERADNAVEIVFVEIKDHII 757
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
ELM N+L QKL+ ++EQ T LI + SS + +I + G+R +QK++ EY
Sbjct: 758 ELMTDPFGNYLCQKLLECTDDEQRTVLIKNSASS---MTKIALNQHGTRALQKMI---EY 811
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
+ T +Q +++ AL+ V L + +GNHVI++CL P+ + + + + NC+
Sbjct: 812 IS----TPQQIQIIIEALRYDVVLLIQDLNGNHVIQKCLNHLSPENAQFIFDSVGTNCIA 867
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
+ T R GCC+LQ CI A QK L+ V+ NA+ L + +GNYVVQYIL L P T
Sbjct: 868 VGTHRHGCCVLQRCIDHASGLQKGALVDQVINNAFALVQDPFGNYVVQYILDLGEPCFTE 927
Query: 465 DVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
+ A + LS K SSNVV+KC+ + +I EI E+ L+ D + NYV
Sbjct: 928 PLCQSFAHQVAYLSKQKFSSNVVEKCIRCATGNVRRAVILEIAEPRELAMLLRDSFANYV 987
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+QTA D + + L + V P ++ YG+ + K++
Sbjct: 988 VQTAMDFAD-EETKNLLMENVRPILPSIRHTPYGRRIATKLQ 1028
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 205/374 (54%), Gaps = 11/374 (2%)
Query: 194 SPSYSNLSHGFLSDHHHLGS-STNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAK 252
+P + +GF D + GS S N A +R + IE+L+G ++ + K
Sbjct: 398 TPQVAYDPYGFDEDGYGSGSLYPGGSMGLKNKRADQDREFNRFAGVRIEDLKGELLSLCK 457
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ GCR+LQKK+++ +P +MI +E ELM N+L QKL+ EEQ + +I
Sbjct: 458 DQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAII 517
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
SV + L+ I ++ G+R +QK++D P + + Q L+ AL V+L K
Sbjct: 518 DSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPK----QIRTLILALSMNVVALIKD 570
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++CL K P+ + + IA N +++AT R GCC+LQ I A Q+ +L+
Sbjct: 571 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 630
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
+++ N+ L + +GNYV+QYIL L + + ++ G +LS+ K SSNVV+KC+
Sbjct: 631 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 690
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ-GRRIRQTLYDLVVDNSPF 551
+ E ++ E++ + +L+ D YGNYVIQT D + G+R+ L + + P
Sbjct: 691 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRM--VLVECIRPILPS 748
Query: 552 LQSHMYGKNVLAKV 565
+++ YGK + +K+
Sbjct: 749 IRNTPYGKRIQSKL 762
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 205/374 (54%), Gaps = 11/374 (2%)
Query: 194 SPSYSNLSHGFLSDHHHLGS-STNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAK 252
+P + +GF D + GS S N A +R + IE+L+G ++ + K
Sbjct: 397 TPQVAYDPYGFDEDGYGSGSLYPGGSVGLKNKRADQDREFNRFAGVRIEDLKGELLSLCK 456
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ GCR+LQKK+++ +P +MI +E ELM N+L QKL+ EEQ + +I
Sbjct: 457 DQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAII 516
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
SV + L+ I ++ G+R +QK++D P + + Q L+ AL V+L K
Sbjct: 517 DSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPK----QIRTLILALSMNVVALIKD 569
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++CL K P+ + + IA N +++AT R GCC+LQ I A Q+ +L+
Sbjct: 570 LNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVT 629
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
+++ N+ L + +GNYV+QYIL L + + ++ G +LS+ K SSNVV+KC+
Sbjct: 630 EIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIR 689
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ-GRRIRQTLYDLVVDNSPF 551
+ E ++ E++ + +L+ D YGNYVIQT D + G+R+ L + + P
Sbjct: 690 VADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRM--VLVECIRPILPS 747
Query: 552 LQSHMYGKNVLAKV 565
+++ YGK + +K+
Sbjct: 748 IRNTPYGKRIQSKL 761
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 181/329 (55%), Gaps = 11/329 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK+++RN I++I E + ELM N+L QKL+
Sbjct: 615 RHEIYTLCKDQHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQKLLEFC 674
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + + ++ I + G+R +QK++ EY + T++Q +++ AL
Sbjct: 675 NDEQRNTLVRNASPA---MVSIALNQHGTRALQKMI---EYIS----TEDQTQMIIQALS 724
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL P + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 725 GQVVDLIQDLNGNHVIQKCLNHLKPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAA 784
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK L+ + NA+ L + +GNYVVQYIL L T + GR LS K S
Sbjct: 785 GYQKIDLVHRITQNAFSLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFS 844
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + + +I E++ E+ L+ D YGNYVIQTA + + G + L +
Sbjct: 845 SNVIEKCIRCANMDAKAMMIQELLDMVELEMLMRDQYGNYVIQTALEFAPG-ELALHLIE 903
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
+ P +++ YG+ ++AKV+ + R
Sbjct: 904 SMRPILPTIRATPYGRRIMAKVQEREGRL 932
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 190/331 (57%), Gaps = 13/331 (3%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+SI+++ I + +D+ GCRFLQKK++E + E+I EV + + ELM N+L
Sbjct: 1025 YTSIDQISSSIYPLCRDQHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLC 1084
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ N+ Q +I V ++RI ++ G+R +QK++ E+ T T EQ +
Sbjct: 1085 QKLLEHCNDRQRLVIIDKVGPD---IVRISMNMHGTRAVQKMI---EFLT----TPEQIA 1134
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCL 414
L+ +L V L + +GNHVI++CL K P + + + ++ NC+ +AT R GCC+
Sbjct: 1135 LIKKSLAQHVVPLIQDLNGNHVIQKCLNKLAPPDNQFIYDSVSSSANCIAVATHRHGCCV 1194
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ CI A E QK +LI +V+AN+ VL + +GNYVVQY+L L P +T ++ + G
Sbjct: 1195 LQRCIDHASETQKVQLIQEVIANSLVLVQDPFGNYVVQYVLDLPFPGLTCEMAKRFVGHV 1254
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
L+ K SSNVV+KCL + +I E+I ++ L+ DP+ NYVIQT+ +++
Sbjct: 1255 SILATQKFSSNVVEKCLHVADPITRGNLIQELIDCDTLLHLLQDPFANYVIQTSLTIAEP 1314
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + + + L++ YGK + K+
Sbjct: 1315 HQ-HTKLVEAIKPHLAQLKNTPYGKRIQNKI 1344
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 187/335 (55%), Gaps = 13/335 (3%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR--HQS 291
R + + +E+L+G I + KD+ GCR+LQKK++E +MI E ELM
Sbjct: 524 RFAGTRLEDLQGEIPALCKDQHGCRYLQKKLEEGVVEHRDMIFRETFSHFAELMTVLDPF 583
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+L QKL+ +EQ + SV Q L+ I ++ G+R +QK++D TR+Q+
Sbjct: 584 GNYLCQKLLEYSTDEQRNLICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQIH 638
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++ AL V L K +GNHVI++CL K P+ + + +A NC+++AT R G
Sbjct: 639 S-----IILALSLHVVVLIKDLNGNHVIQKCLNKLSPEDNQFIYNAVAANCVEVATHRHG 693
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
CC+LQ CI A + Q+ +L+ ++ NA L + YGNYVVQY+L L + + V+ Q
Sbjct: 694 CCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQFT 753
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
G ALS+ K SSNV++KC+ + +I E++ + +L+ D YGNY +QTA D
Sbjct: 754 GNVCALSVQKFSSNVIEKCIRVAEHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTALDY 813
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ + R L + + P +++ YGK + K++
Sbjct: 814 AEASQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 847
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 189/336 (56%), Gaps = 7/336 (2%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +E+L G I + KD+ GCR+LQKK++E P +MI E +LM N
Sbjct: 27 RFAGTRLEDLAGEIPSLCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGN 86
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ + SV L+ I ++ G+R +QK++D P + +++
Sbjct: 87 YLCQKLLEFANDEQRNLICESVALD---LVGISLNMHGTRAVQKMIDYLSTPRQARVSCS 143
Query: 354 ---QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
Q ++ AL V+L K +GNHVI++CL + P+ + + +A +C+++AT R
Sbjct: 144 SILQIHAIIIALSMNVVTLIKDLNGNHVIQKCLNRLAPEDNQFIYNAVAAHCVEVATHRH 203
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ CI A E Q+ +L+ ++ NA L + YGNYVVQYIL L + + V+ Q
Sbjct: 204 GCCVLQRCIDHASEAQRMQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 263
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G LS+ K SSNV++KC+ + ++ E + ++ +L+ D +GNY +QTA D
Sbjct: 264 VGNVIPLSMQKFSSNVIEKCIRVAEPSTRKLLVEEFLSRAKLEKLLRDSFGNYCVQTALD 323
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R +L + + P +++ YGK + +K++
Sbjct: 324 YADPAQ-RLSLVEGIRPILPLIRNTPYGKRIQSKLQ 358
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 200/332 (60%), Gaps = 19/332 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+AKD+ GCR LQK V+E + ++IL +ID + EL N+++QK
Sbjct: 353 SMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQK 412
Query: 299 LIGVLNEEQMTKLILSVVSSQQR-LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L V +EEQ T LI+SV++S R L+RIC + G+RV+QK+++ + T++Q +L
Sbjct: 413 LFDVSDEEQRT-LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVK-------TKQQIAL 464
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ S LK ++L K +GNHVI+ CLQ P+ + +LE + C ++A R GCC+LQ
Sbjct: 465 VKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQC 524
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI + Q+ RL+A++ N+ LS+ +GNYVVQY++ ++ V ++ Q Y L
Sbjct: 525 CISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAEL 582
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+ K SS+V++KCL + E ++ I+ E++ P L+ DPY NYVIQTA V++G +
Sbjct: 583 ATQKFSSHVIEKCLRKYPESRAE-IVRELLCVPNFEYLLQDPYANYVIQTALSVTKG-PV 640
Query: 538 RQTLYDLV-----VDNSPFLQSHMYGKNVLAK 564
R L V + +SP+ + ++ K +L K
Sbjct: 641 RAKLVAKVYRYGKLHSSPYCKK-IFSKTILKK 671
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 185/332 (55%), Gaps = 11/332 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ G+I + KD+ GCR+LQKK++ERN + MI E + ELM N+L QKL
Sbjct: 358 LDSFTGQIYDLCKDQHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKL 417
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +Q L++
Sbjct: 418 LEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQQVHLII 467
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ V L + +GNHVI++CL K + + + + NC+++ T R GCC+LQ CI
Sbjct: 468 EALRFRVVELIQDLNGNHVIQKCLNKLTAPDAQFIFDAVGHNCIEVGTHRHGCCVLQRCI 527
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +QK LI + +A VL + +GNYVVQYI+ L P T +V G LS
Sbjct: 528 DHASGDQKLWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSR 587
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KCL + I+ E++ E+ +L+ D + NYVIQTA + + + Q
Sbjct: 588 HKFSSNVIEKCLRCAQAPSKDMIVEELLGPQEMERLLRDSFANYVIQTALEYATPHQKYQ 647
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ NR
Sbjct: 648 -LVESIRPILPQIRTTPYGRRIQAKISAFDNR 678
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 666 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKL 725
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 726 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 775
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 776 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 835
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +Q+A+LI + ++Y L + +GNYV+QYIL L P T + A G ALS
Sbjct: 836 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSK 895
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D + R
Sbjct: 896 QKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPES-RN 954
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
TL + V P ++S +G+ + K+
Sbjct: 955 TLIEAVRPLLPGIRSQPHGRRIAGKI 980
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 621 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKL 680
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 681 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 730
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 731 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 790
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +Q+A+LI + ++Y L + +GNYV+QYIL L P T + A G ALS
Sbjct: 791 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSK 850
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D + R
Sbjct: 851 QKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPES-RN 909
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
TL + V P ++S +G+ + K+
Sbjct: 910 TLIEAVRPLLPGIRSQPHGRRIAGKI 935
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 621 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKL 680
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 681 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 730
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 731 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 790
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +Q+A+LI + ++Y L + +GNYV+QYIL L P T + A G ALS
Sbjct: 791 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSK 850
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D + R
Sbjct: 851 QKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPES-RN 909
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
TL + V P ++S +G+ + K+
Sbjct: 910 TLIEAVRPLLPGIRSQPHGRRIAGKI 935
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 621 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKL 680
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 681 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 730
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 731 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 790
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +Q+A+LI + ++Y L + +GNYV+QYIL L P T + A G ALS
Sbjct: 791 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSK 850
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D + R
Sbjct: 851 QKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPES-RN 909
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
TL + V P ++S +G+ + K+
Sbjct: 910 TLIEAVRPLLPGIRSQPHGRRIAGKI 935
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 200/332 (60%), Gaps = 19/332 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+AKD+ GCR LQK V+E + ++IL +ID + EL N+++QK
Sbjct: 246 SMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQK 305
Query: 299 LIGVLNEEQMTKLILSVVSSQQR-LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L V +EEQ T LI+SV++S R L+RIC + G+RV+QK+++ + T++Q +L
Sbjct: 306 LFDVSDEEQRT-LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVK-------TKQQIAL 357
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ S LK ++L K +GNHVI+ CLQ P+ + +LE + C ++A R GCC+LQ
Sbjct: 358 VKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQC 417
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI + Q+ RL+A++ N+ LS+ +GNYVVQY++ ++ V ++ Q Y L
Sbjct: 418 CISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAVK--LLVQFRMHYAEL 475
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+ K SS+V++KCL + E ++ I+ E++ P L+ DPY NYVIQTA V++G +
Sbjct: 476 ATQKFSSHVIEKCLRKYPESRAE-IVRELLCVPNFEYLLQDPYANYVIQTALSVTKG-PV 533
Query: 538 RQTLYDLV-----VDNSPFLQSHMYGKNVLAK 564
R L V + +SP+ + ++ K +L K
Sbjct: 534 RAKLVAKVYRYGKLHSSPYCKK-IFSKTILKK 564
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 499 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKL 558
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 559 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 608
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 609 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 668
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +Q+A+LI + ++Y L + +GNYV+QYIL L P T + A G ALS
Sbjct: 669 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSK 728
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D + R
Sbjct: 729 QKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPES-RN 787
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
TL + V P ++S +G+ + K+
Sbjct: 788 TLIEAVRPLLPGIRSQPHGRRIAGKI 813
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 201/356 (56%), Gaps = 14/356 (3%)
Query: 213 SSTNASSRYNNFYARARHHHHRTS-YSSI--EELRGRIILVAKDEQGCRFLQKKVDERNP 269
S+ NA + + +H S +SSI E+L G+I +++KD+ GCR+LQ+K++E+N
Sbjct: 221 SNLNALKFHATLQKQKKHSQEEASRFSSIMLEDLVGQISVLSKDQHGCRYLQRKLEEQNE 280
Query: 270 IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDL 329
++MI E+ + ELM N+L QKL+ EEQ L+ V L + ++
Sbjct: 281 KHLDMIYVEIFPNFAELMTDPFGNYLCQKLLEYCTEEQRNMLVEHVAPD---LAAVSLNM 337
Query: 330 SGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
G+R +QKL+ E+ + T Q S +V AL VSL K +GNHVI++CL + +
Sbjct: 338 HGTRAVQKLI---EFLS----THHQISTVVRALALNVVSLIKDLNGNHVIQKCLNRLSHE 390
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ + + ++C ++AT R GCC+LQ CI A + Q+ +L+A++ +A L + +GNY
Sbjct: 391 NNQFIYNAVRKHCTEIATHRHGCCVLQRCIDHASDSQRVQLVAEITYHALTLVQDPFGNY 450
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
VVQY+L L + + +V + G LS+ K SSNV++KC+ + E +I+E++
Sbjct: 451 VVQYVLDLAEIKFSEAIVHRFLGNICLLSVQKFSSNVIEKCIRVASSETRALLIDELLNK 510
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +L+ D Y NYV+QT+ D ++ + R L + + P +++ YGK + K+
Sbjct: 511 ERLDKLLRDSYANYVVQTSLDYAEPAQ-RLQLVECIRPILPSIRNTPYGKRIQTKI 565
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 182/299 (60%), Gaps = 8/299 (2%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
++S + + G I +AK + GCRFLQ+ +DE + ++ + VIDD+ ELM N+L
Sbjct: 299 NFSPLSKFHGYIYYLAKHQNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNYL 358
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ V +++ +++ + +L++ ++ G+RV+QKL+ + +++Q
Sbjct: 359 VQKLLDVGGDDERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITTVD-------SRKQI 411
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
++L+SA+++ ++L K +GNHVI+RCLQ F + + + C+++AT + GCC+L
Sbjct: 412 AMLMSAIQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVL 471
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI + + + +L+ ++ + +L++ +GNYVVQYI+ ++ P + + +Q G Y
Sbjct: 472 QRCIDYSTGKYQDKLVKEICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYT 531
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS+ K SS+VV+KCL+ E +S I+ E + P QL+ D YGNYV+Q A V++G
Sbjct: 532 NLSMQKYSSHVVEKCLVHLAEIKSR-IVQEFLSFPHFEQLLQDLYGNYVVQRALGVTKG 589
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 186/326 (57%), Gaps = 9/326 (2%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ LRG + +A+D+ GCR LQ+++D+ +++ I + V +LM N+L+QK
Sbjct: 158 SLAGLRGVMYHMARDQHGCRLLQQRLDD-GKREVDYIFAGVSRHAAQLMVDPFGNYLMQK 216
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ V ++ Q L+L++ + L+RI ++ G+R +QKL++ + +E+ L+
Sbjct: 217 LLAVCDDGQRMTLVLTLTADPFALVRISLNVHGTRAVQKLIE-------RLSAREEIGLV 269
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ AL+ + L K +GNHV+++CL F + K + A +C+D+ GCC+LQ C
Sbjct: 270 MDALRPGFLELIKDTNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRC 329
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I ++ E + +L+A + N + L+E +YGNYVVQ +L LKIP + + Q G+Y LS
Sbjct: 330 IARSRGEHRDKLVAAIAHNGFKLAEDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLS 389
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ K SSNVV+KCL E II E++ P + QL+ Y NYV+ +A S+G +
Sbjct: 390 MQKFSSNVVEKCLKVFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSALKNSKG-SLH 448
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAK 564
L + ++ + L++ Y K + +K
Sbjct: 449 SALINAILPHEELLRTSPYCKRIYSK 474
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 197/355 (55%), Gaps = 22/355 (6%)
Query: 216 NASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMI 275
NA + +N Y H + + ++ + +AKD+ GCR LQK +D+ P +E+I
Sbjct: 176 NAGGKVDNIYDPTYIHFNLNTL--LQSNNASLSDMAKDQSGCRLLQKSLDDI-PAALEII 232
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
L EV+D+L +LM N+L QKL+ V +E+Q++ LI ++ ++ L++I ++ G+R +
Sbjct: 233 LKEVLDNLVDLMTDPFGNYLCQKLMVVCSEKQLSLLINALWNN---LVQISLNMHGTRAV 289
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QKL++ + T+E L++ L+ + L K +GNHVI++CL P + +
Sbjct: 290 QKLIEIVK-------TRENTQYLITILEGGVLDLIKDLNGNHVIQKCLLCLPSTDCQFIY 342
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ + NC++LAT R GCC++Q CI A EQ+A L+ ++V N VL E ++GNYVVQY++
Sbjct: 343 DAMENNCVELATHRHGCCVMQRCIDSANLEQRASLVENIVDNTLVLVEDAFGNYVVQYVM 402
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP--EIV 513
LK + ++ L + L+ K SSNVV++ L+ +E I+ ++ P
Sbjct: 403 KLKDETINCKILELLLPNLYELAKQKFSSNVVERLLIYGPDEVRKSIVETLLNEPPEAFK 462
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMY---GKNVLAKV 565
LILDPYGNYVIQ ++G + L + P+L GK + AK+
Sbjct: 463 MLILDPYGNYVIQRMLSFTRGEELNSILNMI----KPYLNELRVLSTGKRIAAKI 513
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 171/294 (58%), Gaps = 8/294 (2%)
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
+++ I + V ELM + N+L+QKL+ V ++EQ ++L++ L+RI ++
Sbjct: 213 EVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVLTLTKDPFVLVRISLNVH 272
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
G+R +QKL+++ T+E+ L+V AL+ + L K P+GNHV++RCLQ F +
Sbjct: 273 GTRAVQKLIESLR-------TREEIQLVVEALRPGFLELIKDPNGNHVVQRCLQSFDAND 325
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
K + E A +CLD+ GCC+LQ CI + EQ+ +L+A + +N + L++ +YGNYV
Sbjct: 326 NKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNYV 385
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP 510
VQY++ LK+P A + Q GRY LS+ K SSNVV+KCL E II E++ P
Sbjct: 386 VQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAVP 445
Query: 511 EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
QL+ P+ NYVI +A S+G + L + + + L++ Y K + ++
Sbjct: 446 HFEQLLQHPFANYVIYSAIQNSKG-SLHSALTNAIRPHVELLRTSPYCKRIYSR 498
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 189/338 (55%), Gaps = 13/338 (3%)
Query: 230 HHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRH 289
H T+Y+ + I+ + KD+ GCR+LQK+++ RN + I D + +LM+
Sbjct: 652 HMRSTTNYNFDSLMPHDIVELCKDQHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQD 711
Query: 290 QSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
AN+L QK+ N+EQ T L+ + ++++I + G+R +QK++ EY +
Sbjct: 712 PFANYLCQKMYEFCNDEQRTALVHNAAP---QMVKIALNQHGTRALQKMI---EYVS--- 762
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
T EQ ++++ AL++ V+L + +GNHVI++CL ++ + E + C+ + T R
Sbjct: 763 -TAEQINIIIEALRHNVVTLIQDLNGNHVIQKCLNHLGSKDSQFIFEAVGAACIVVGTHR 821
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GCC+LQ CI A +Q+ LI + ANAY L + +GNYVVQYIL L+ Q T +
Sbjct: 822 HGCCVLQRCIDHASGDQRIALIGAITANAYSLVQDPFGNYVVQYILDLQEEQFTIPMCNA 881
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAW 529
G LS K SSNVV+KC+ S E +I E++ E+ +LI D Y NYV+QT+
Sbjct: 882 FRGNVPMLSKQKFSSNVVEKCIRVSNAETRRNLIEELLIPGELEKLIRDSYANYVVQTSL 941
Query: 530 DVSQG-RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D + +IR L + + +++ YG+ +++K++
Sbjct: 942 DYADAPTKIR--LVEAIRPMLSAIRTTPYGRRIMSKIQ 977
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 190/341 (55%), Gaps = 17/341 (4%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + ++ G I + KD+ GCR+LQKK++ERN + +I E + ELM N
Sbjct: 598 RYQNTPLDSFVGNIYELCKDQHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGN 657
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+++ T LI + + Q ++RI + G+R +QK++ EY + T +
Sbjct: 658 YLCQKLLEFCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMI---EYVS----TPQ 707
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +++ AL+ V L + +GNHVI++CL K P + + + + +C+++ T R GCC
Sbjct: 708 QVHIIIEALRYRVVELIQDLNGNHVIQKCLNKLTPPDAQFIFDAVGGSCVEVGTHRHGCC 767
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +QK LI + +A +L + +GNYVVQYI+ L P T +V
Sbjct: 768 VLQRCIDHASGDQKLWLIQRITEHARILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDC 827
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS- 532
LS K SSNV++KCL + I+ E++R+ E+ +L+ D + NYVIQTA + +
Sbjct: 828 ITQLSRHKFSSNVIEKCLRCAQPPSKDLIVEELLRNQEMERLLRDSFANYVIQTALEYAT 887
Query: 533 --QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
Q R+ + + ++ P +++ YG+ + AK+ NR
Sbjct: 888 PHQKHRLVEAIRPIL----PQIRTTPYGRRIQAKISAFDNR 924
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 183/329 (55%), Gaps = 11/329 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK++ERNP I++I E + ELM N+L QKL+
Sbjct: 593 RQEIYGLCKDQHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGNYLCQKLLEYC 652
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + S+ +++I + G+R +QK++ E+ + T EQ +++ AL
Sbjct: 653 NDEQRNTLVRNATSA---MVQIAFNQHGTRALQKMI---EFIS----TDEQTQMIIQALS 702
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 703 GEVVDLIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHAS 762
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK LI + A+++ L + +GNYV+QYIL L T + G+ LS+ K S
Sbjct: 763 GFQKVDLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQKFS 822
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + + +I E++ ++ L+ D +GNYVIQTA + + + L +
Sbjct: 823 SNVIEKCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPA-ELCMHLIE 881
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
++ P ++ YG+ +++KV ++R
Sbjct: 882 MMRPLLPSIRQTPYGRRIMSKVGERESRL 910
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 187/333 (56%), Gaps = 14/333 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLIQK 298
+E RG+I + KD+ GCR+LQKK++ER ++ + MI E + ELM N+L QK
Sbjct: 311 LESFRGQIYELCKDQYGCRYLQKKLEERVHMNQVHMIWLETNQHVIELMTDPFGNYLCQK 370
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ + N+++ T LI + + Q ++RI + G+R +QK+++ P +Q L+
Sbjct: 371 LLELCNDDERTVLIQN---ASQDMVRIALNQHGTRALQKMIETVSTP-------QQVHLI 420
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ AL+ V L + +GNHVI++CL K + + + + E C+++ T R GCC+LQ C
Sbjct: 421 IEALRYRVVQLIQDLNGNHVIQKCLNKLTASDAQFIFDAVGEKCVEVGTHRHGCCVLQRC 480
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I A +QK LI + +A +L + +GNYVVQYI+ L P T +VA G LS
Sbjct: 481 IDHATGDQKLWLIQCITKDARILVQDPFGNYVVQYIIDLHEPTFTEPIVASFEGCISMLS 540
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
K SSNV++KCL + I++E++ +I + D + NYV+QTA D S +++
Sbjct: 541 RHKFSSNVIEKCLRCAQPPSKDMIVSELLG--DIEGCLQDSFANYVVQTALDFST-PQLK 597
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
L + + P +++ YG+ + AK+ NR
Sbjct: 598 HRLVEAIRPVLPKIRTTPYGRRIQAKIAAYDNR 630
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 189/353 (53%), Gaps = 26/353 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +E+L+G I + KD+ GCR+LQKK++E P +MI E +LM N
Sbjct: 578 RFAGTRLEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGN 637
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT-- 351
+L QKL+ ++Q + SV Q L+ I ++ G+R +QK++D TR+Q +
Sbjct: 638 YLCQKLLEYSTDDQRNVICESVA---QDLVNISLNMHGTRAVQKMIDF--LSTRRQASLV 692
Query: 352 ------------------QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKD 393
Q ++ AL V L K +GNHVI++CL K P+ +
Sbjct: 693 PARFHYIAYRDGQTDLKYNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQF 752
Query: 394 LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQY 453
+ +A NC+++AT R GCC+LQ C+ A + Q+ +L+ ++ NA L + YGNYVVQY
Sbjct: 753 IYNAVAANCVEVATHRHGCCVLQRCVDHASDIQRVQLVNEITYNALTLVQDPYGNYVVQY 812
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV 513
IL L + + V+ Q G ALS+ K SSNV++KC+ + +I E++ +
Sbjct: 813 ILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLE 872
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+L+ D YGNY +QTA D ++ + R L + + P +++ YGK + K++
Sbjct: 873 KLLRDSYGNYCVQTALDYAEPSQ-RALLVEGIRPVLPLIRNTPYGKRIQNKLQ 924
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 186/326 (57%), Gaps = 9/326 (2%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ LRG + +A+D+ GCR LQ+++D+ +++ I + V +LM N+L+QK
Sbjct: 158 SLAGLRGVMYHMARDQHGCRLLQQRLDD-GKREVDYIFAGVSRHAAQLMVDPFGNYLMQK 216
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ V ++ Q L+L++ + L+RI ++ G+R +QKL++ + +E+ L+
Sbjct: 217 LLAVCDDGQRMTLVLTLTADPFALVRISLNVHGTRAVQKLIE-------RLSAREEIGLV 269
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ AL+ + L K +GNHV+++CL F + K + A +C+D+ GCC+LQ C
Sbjct: 270 MDALRPGFLELIKDTNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRC 329
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
I ++ E + +L+A + N + L++ +YGNYVVQ +L LKIP + + Q G+Y LS
Sbjct: 330 IARSRGEHRDKLVAAIAHNGFKLAQDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLS 389
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ K SSNVV+KCL E II E++ P + QL+ Y NYV+ +A S+G +
Sbjct: 390 MQKFSSNVVEKCLKVFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSALKNSKG-SLH 448
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAK 564
L + ++ + L++ Y K + +K
Sbjct: 449 SALINAILPHEELLRTSPYCKRIYSK 474
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 187/326 (57%), Gaps = 14/326 (4%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G ++ +A+D+ GCR LQ++++ + I +L+EV+D+L+ LM N+L QKL+
Sbjct: 219 QILGNVVSIAQDQTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMTDPFGNYLCQKLMS 278
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V + +Q+ K+I S + + + IC ++ G+R +QKL++ +T+E + + S
Sbjct: 279 VCDSDQLGKII---TSCEPQFISICLNMHGTRAIQKLIEV--------VTEENITRITSI 327
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V L +GNHVI++CL ++ + + + ENC+ LAT R GCC++Q CI
Sbjct: 328 LSTGVVDLVNDLNGNHVIQKCLVSLSSEHCDFIYKAMNENCVYLATHRHGCCVMQRCIDA 387
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
A Q+A+LI + + L E +YGNYV+QY+L LK + + +VA L + K
Sbjct: 388 ASPAQRAKLIDTISSKTLELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVTKFAKQK 447
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVSQGRRIRQ 539
SSNVV++CL+ E + +I++ + P V LILDP+GNYVIQ +V+Q +
Sbjct: 448 FSSNVVERCLIFCPLEVRSTLISKFLNVPFDVLKDLILDPFGNYVIQRVLNVAQPDEL-T 506
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
+L D + + L+ GK + AK+
Sbjct: 507 SLLDSIQPHLEELKVASSGKRIAAKI 532
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 172/301 (57%), Gaps = 19/301 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ G++ + KD+ GCRFLQ+++D P I E + ELM N+LIQKL
Sbjct: 409 LEDYIGKLYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKL 468
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ ++ EQ L V SS + + I D G+R +QKL++ T+E+ +++
Sbjct: 469 VERVSAEQRITL---VKSSADQFVSIALDPHGTRALQKLVECIS-------TEEESRIII 518
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
++LKN V LSK +GNHV+++CLQKF ++ + + +C+ +AT R GCC+LQ C+
Sbjct: 519 ASLKNSVVQLSKDLNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCL 578
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG----LKIPQVTADVVAQLAGRYF 475
++Q+ +L A V+AN L+ +GNYVVQYIL L P T +V L R
Sbjct: 579 DYGSDQQRDQLCAQVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVI 638
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLILDPYGNYVIQTAWDVS 532
LSL K SNVV+K L S + +I+E++ P + QL+ D +GNYV+QTA DVS
Sbjct: 639 ELSLHKFGSNVVEKILRTSAVAEL--MISELLATGGQPGVEQLLHDGFGNYVLQTALDVS 696
Query: 533 Q 533
+
Sbjct: 697 K 697
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 172/301 (57%), Gaps = 19/301 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ G++ + KD+ GCRFLQ+++D P I E + ELM N+LIQKL
Sbjct: 409 LEDYIGKLYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKL 468
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ ++ EQ L V SS + + I D G+R +QKL++ T+E+ +++
Sbjct: 469 VERVSAEQRITL---VKSSADQFVSIALDPHGTRALQKLVECIS-------TEEESRIII 518
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
++LKN V LSK +GNHV+++CLQKF ++ + + +C+ +AT R GCC+LQ C+
Sbjct: 519 ASLKNSVVQLSKDLNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCL 578
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG----LKIPQVTADVVAQLAGRYF 475
++Q+ +L A V+AN L+ +GNYVVQYIL L P T +V L R
Sbjct: 579 DYGSDQQRDQLCAQVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVI 638
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLILDPYGNYVIQTAWDVS 532
LSL K SNVV+K L S + +I+E++ P + QL+ D +GNYV+QTA DVS
Sbjct: 639 ELSLHKFGSNVVEKILRTSAVAEL--MISELLATGGQPGVEQLLHDGFGNYVLQTALDVS 696
Query: 533 Q 533
+
Sbjct: 697 K 697
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 202/350 (57%), Gaps = 21/350 (6%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI----------EMIL 276
+ H +R +E+++G I + KD+ GCR+LQKK+++ + +D ++I
Sbjct: 167 KVDHDLNRFIGVKLEDIKGEIYSLCKDQHGCRYLQKKLEDDDAVDEVVDGVQLTSRQLIF 226
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
+++ ELM N+L QK++ N++Q L +V L+ I ++ G+R +Q
Sbjct: 227 NQIYTHFSELMTDPFGNYLCQKMLEFANDQQRDTLCETV---SPELVTISLNMHGTRAVQ 283
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K++D TR+Q+ ++++S N+ V+L K +GNHVI++CL + P+ + +
Sbjct: 284 KMIDY--LSTRRQIN----TIIMSLSLNV-VTLIKDLNGNHVIQKCLNRLIPNDNQFIYN 336
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+A NC+++AT R GCC+LQ CI A ++Q+ +L+ ++ +A L + +GNYVVQY+L
Sbjct: 337 AVASNCIEVATHRHGCCVLQRCIDHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLD 396
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L + + VV Q G ALS+ K SSNV++KC+ + + +I+E+ P + +L+
Sbjct: 397 LNDNRFSDGVVRQFLGHICALSVQKFSSNVIEKCIRVADASTRSSVIDELNHRPRLEKLL 456
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D +GNYV+QTA D ++ + R L + + P +++ YGK + +K++
Sbjct: 457 RDAFGNYVVQTALDFAEPVQ-RIALVEAIRPILPMIRNTPYGKRIQSKLQ 505
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 196/354 (55%), Gaps = 28/354 (7%)
Query: 201 SHGFLSDHHHLGSSTNASSR-YNNFYARARHHHHRT-------------SYSSIEELRGR 246
++GF S HHH G + + R YNN+ H R + + + + +G
Sbjct: 339 NNGFNSHHHHQGGNNGPNGRRYNNYNGNYHGHGRRNMGQRRRGEDASKFANARLADFQGE 398
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I + KD+ GCRFLQK++D N +I E+ + ELM N+LIQKL+ +N+E
Sbjct: 399 IYSLCKDQHGCRFLQKQLD-LNTGSSTIIFDEIHQHVIELMIDPFGNYLIQKLLEKVNDE 457
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q L+ + S + + I D G+R +QKL++ TQ++ ++V +L +
Sbjct: 458 QRITLVENASS---QFVSIALDPHGTRALQKLVECIN-------TQKEAEIIVESLSSDV 507
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
VSLS+ +GNHVI++CLQ+ P ++ + + +ENC +AT R GCC+LQ C+ +EQ
Sbjct: 508 VSLSRDLNGNHVIQKCLQRLTPADSQFIFDAASENCSKIATHRHGCCVLQRCLDHGSKEQ 567
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+L + +A LS ++GNYVVQY+L + A ++ + LSL K SNV
Sbjct: 568 CEQLSLVISKSAVDLSLDAFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGSNV 627
Query: 487 VQKCLLESGEEQSTGIINEIIRH-PEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
++KCL S S +I+EI++ E+V+L+ DP+GNYV+QT+ DV++ + Q
Sbjct: 628 IEKCLRVS--TLSKQLIDEILKSGDELVKLLNDPFGNYVLQTSLDVAKEEQFEQ 679
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 186/343 (54%), Gaps = 13/343 (3%)
Query: 229 RHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R+H +++ +E RG + + KD+ GCR+LQ+K+++ N I+ I +E + EL
Sbjct: 573 RNHGDEARFANMPLENYRGSLYELCKDQHGCRYLQRKLEDGNEEHIQAIFAETCPHIIEL 632
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N+L QKL EEQ T LI + + L I + G+R +QK+++
Sbjct: 633 MTDPFGNYLCQKLFEFCTEEQRTALINTAAPA---LTTIALNQHGTRALQKMIEFVR--- 686
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLA 406
T+EQ ++ AL + V L + +GNHV+++CL + + ++ + + + + C+ +
Sbjct: 687 ----TEEQVETIIRALSDRVVDLVQDLNGNHVVQKCLTRLGAERSQFIYDAVGKYCVVVG 742
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
T R GCC+LQ CI AQ Q+A+LIA + A+ L + +GNYVVQYIL L T +
Sbjct: 743 THRHGCCVLQRCIDHAQGFQRAQLIARITHCAFDLVQDPFGNYVVQYILDLDEISFTKPL 802
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
GR LS K SSNV++KCL + + +I E++ E+ +++ D + NYV+Q
Sbjct: 803 CESFLGRIPQLSKQKFSSNVIEKCLRTADSDTKRRMIEEMLIGNELEKMLRDAFANYVVQ 862
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
TA + + + + L D V P ++ +G+ + K+ GN+
Sbjct: 863 TALEFAD-PQTKMRLVDAVRPILPMIKQTPHGRRIAGKILGNE 904
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 34/246 (13%)
Query: 247 IILVAKDEQGCRFLQKKVD-ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
+ +A ++ G R LQK ++ R +E I+ + D + +L++ + NH++QK + L
Sbjct: 665 LTTIALNQHGTRALQKMIEFVRTEEQVETIIRALSDRVVDLVQDLNGNHVVQKCLTRLGA 724
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL----TQEQQSLLVSA 361
E+ ++ I V + + + G V+Q+ +D + R QL T L+
Sbjct: 725 ER-SQFIYDAVG--KYCVVVGTHRHGCCVLQRCIDHAQGFQRAQLIARITHCAFDLVQDP 781
Query: 362 LKNITVS------------------------LSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
N V LSK ++VI++CL+ D + ++EE
Sbjct: 782 FGNYVVQYILDLDEISFTKPLCESFLGRIPQLSKQKFSSNVIEKCLRTADSDTKRRMIEE 841
Query: 398 --IAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
I + D ++Q + A + K RL+ V ++ + +G + IL
Sbjct: 842 MLIGNELEKMLRDAFANYVVQTALEFADPQTKMRLVDAVRPILPMIKQTPHGRRIAGKIL 901
Query: 456 GLKIPQ 461
G + P+
Sbjct: 902 GNEAPR 907
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 185/358 (51%), Gaps = 31/358 (8%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 598 RFGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 657
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+EQ T LI + +L++I + G+R +QK+++ P E
Sbjct: 658 YLCQKLLEYSNDEQRTALINNAAP---QLVKIALNQHGTRALQKMIEFISTP-------E 707
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q ++ AL+ V L + +GNHVI++CL + + + + + +C+ + T R GCC
Sbjct: 708 QTQTVIKALRGRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCC 767
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ-------VTADV 466
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYI P D
Sbjct: 768 VLQRCIDHASGDQRARLIEQITKNAFTLVQDPFGNYVVQYICKEHQPPQMIWTNFANNDD 827
Query: 467 VAQLAGRYF-------------ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV 513
L R+F ALS K SSNV++KC+ + + +I E++ E+
Sbjct: 828 AVDLNERHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELE 887
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+++ D + NYV+QTA D + R L D + P ++ +G+ + K+ +N+
Sbjct: 888 KMLRDSFANYVVQTAMDFADPDS-RNKLIDAIRPILPAIRQTPHGRRITGKIMSAENQ 944
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 192/348 (55%), Gaps = 14/348 (4%)
Query: 226 ARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHE 285
A A +R S +E+L+G I+ + KD+ GCR+LQKK++E +P +MI E E
Sbjct: 413 AEADREFNRFSGMRLEDLQGEILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPE 472
Query: 286 LMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYP 345
LM N+L QKL+ EEQ + +I SV + L+ I ++ G+R +QK++D P
Sbjct: 473 LMIDPFGNYLCQKLLEHATEEQRSAIIDSVSND---LVGISLNMHGTRAVQKMVDFLAQP 529
Query: 346 TRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDL 405
+ + Q L+ AL V+L K +GNHVI++CL K P+ + + IA N +++
Sbjct: 530 RQPK----QIRTLIYALSVNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEV 585
Query: 406 ATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD 465
AT R GCC+LQ I A Q+ +L+ +++ N+ L + +GNYV+QYIL L + +
Sbjct: 586 ATHRHGCCVLQRSIDHASPAQRLQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEP 645
Query: 466 VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
++ G +L SSNVV+KC+ + E ++ E++ + +L+ D YGNYVI
Sbjct: 646 LIRTFIGNVCSL----FSSNVVEKCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVI 701
Query: 526 QTAWDVSQ-GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
QT D + G+R+ L + + P +++ YGK + +K++ F
Sbjct: 702 QTILDYCEIGQRM--VLVECIRPILPSIRNTPYGKRIQSKLQREDASF 747
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 192/348 (55%), Gaps = 14/348 (4%)
Query: 226 ARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHE 285
A A +R S +E+L+G I+ + KD+ GCR+LQKK++E +P +MI E E
Sbjct: 413 AEADREFNRFSGMRLEDLQGEILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPE 472
Query: 286 LMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYP 345
LM N+L QKL+ EEQ + +I SV + L+ I ++ G+R +QK++D P
Sbjct: 473 LMIDPFGNYLCQKLLEHATEEQRSAIIDSVSND---LVGISLNMHGTRAVQKMVDFLAQP 529
Query: 346 TRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDL 405
+ + Q L+ AL V+L K +GNHVI++CL K P+ + + IA N +++
Sbjct: 530 RQPK----QIRTLIYALSVNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEV 585
Query: 406 ATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD 465
AT R GCC+LQ I A Q+ +L+ +++ N+ L + +GNYV+QYIL L + +
Sbjct: 586 ATHRHGCCVLQRSIDHASPAQRLQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEP 645
Query: 466 VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
++ G +L SSNVV+KC+ + E ++ E++ + +L+ D YGNYVI
Sbjct: 646 LIRTFIGNVCSL----FSSNVVEKCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVI 701
Query: 526 QTAWDVSQ-GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
QT D + G+R+ L + + P +++ YGK + +K++ F
Sbjct: 702 QTILDYCEIGQRM--VLVECIRPILPSIRNTPYGKRIQSKLQREDASF 747
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 11/329 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK++ERN +I++I E + ELM N+L QKL+
Sbjct: 588 RQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFC 647
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + + +++I + G+R +QK++ E+ + T +Q +++ AL
Sbjct: 648 NDEQRNTLVRNAAPA---MVQIAFNQHGTRALQKMI---EFIS----TDDQTQMIIRALS 697
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 698 GQVVDLIQDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHAS 757
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK LI + A+++ L + +GNYVVQYIL L T + G+ LS K S
Sbjct: 758 GFQKVDLIRKITAHSFHLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFS 817
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + +I E++ ++ QL+ D YGNYVIQTA + + L +
Sbjct: 818 SNVIEKCIRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAELCVH-LIE 876
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
+ P ++ YG+ +++KV ++R
Sbjct: 877 AMRPILPSIRQTPYGRRIMSKVAERESRL 905
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 191/340 (56%), Gaps = 22/340 (6%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ +E+ +G I + KD+ GCRFLQK++D MI +E + ELM N+LIQ
Sbjct: 349 AKLEDFQGEIYSLCKDQHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNYLIQ 408
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ ++ +Q L+ + S + +RI D G+R +QKL++ + T+E+ +
Sbjct: 409 KLLDKVSVDQRITLVKNASS---KFVRIALDPHGTRALQKLVECID-------TEEESEI 458
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ AL + VSLS+ +GNHV+++CLQK + + + ++C+++AT R GCC+LQ
Sbjct: 459 IIDALSSHVVSLSRDLNGNHVVQKCLQKLSSKDCQFIFDATCDHCVEIATHRHGCCVLQR 518
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG-------LKIPQVTADVVAQL 470
C+ +EQ L +V N LS +GNYVVQY+L + + A++VA +
Sbjct: 519 CLDHGSKEQCYALSLEVSRNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAI 578
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--HPEIVQLILDPYGNYVIQTA 528
LSL K SNV++KCL S +I++++ +I +L+ DPYGNYV+QTA
Sbjct: 579 KDSIITLSLHKFGSNVIEKCL--KIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTA 636
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
DVS + L +L+ P +++ +GK ++A+++ N
Sbjct: 637 LDVSTPEEFER-LSELLKPLLPTVRNTPHGKRIMARIQVN 675
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 181/326 (55%), Gaps = 13/326 (3%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G ++ +A+D+ GCR LQ++++ + I IL EVID L LM N+L QKL+
Sbjct: 324 QVLGNVLTIAQDQTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTDPFGNYLCQKLMT 383
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V + EQ+ ++I V ++ L IC ++ G+R +QKL++ P E S + S
Sbjct: 384 VCSSEQLGRIIKGV---EKDFLSICLNMHGTRAIQKLIEVVTEP-------EHISFVTSV 433
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V L +GNHVI++CL + + + + + +NC+ LAT R GCC++Q CI
Sbjct: 434 LSTAVVDLVNDLNGNHVIQKCLISLKSEDCEFIYKAMNDNCVYLATHRHGCCVMQRCIDA 493
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
A +Q+ LI + + L E ++GNYV+QY+L LK ++ +V LA + K
Sbjct: 494 ANPQQRNMLIDTISSKTLDLVEDAFGNYVIQYVLRLKDDEINRRIVVALADNVTEFAKQK 553
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVSQGRRIRQ 539
SSNVV++CL+ E + +I++ + P V +LILDP+GNYVIQ +V+Q +
Sbjct: 554 FSSNVVERCLIFCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQRVLNVAQSDEL-S 612
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L D + + L+ GK + AK+
Sbjct: 613 ALLDRIQPHLEELKVASSGKRIAAKI 638
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 11/329 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK++ERN +I++I E + ELM N+L QKL+
Sbjct: 506 RQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFC 565
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + + +++I + G+R +QK++ E+ + T +Q +++ AL
Sbjct: 566 NDEQRNILVRNAAPA---MVQIAFNQHGTRALQKMI---EFIS----TDDQTQMIIRALS 615
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 616 GQVVDLIQDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHAS 675
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK LI + A+++ L + +GNYVVQYIL L T + G+ LS K S
Sbjct: 676 GFQKVDLIRKITAHSFHLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFS 735
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + +I E++ ++ QL+ D YGNYVIQTA + + L +
Sbjct: 736 SNVIEKCIRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAELCVH-LIE 794
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
+ P ++ YG+ +++KV ++R
Sbjct: 795 AMRPILPSIRQTPYGRRIMSKVAERESRL 823
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 156/248 (62%), Gaps = 8/248 (3%)
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M + N+L+QKL V NE+Q +++L++ L+RI + G+RV+QKL+ T
Sbjct: 1 MMNPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMT--LKT 58
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLA 406
RQQ+ SL+V AL+ + L+K HGNHV++RCL+ + K + A+ C+D+A
Sbjct: 59 RQQI-----SLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIA 113
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
T R GCC+LQ CI + + +L+A++ AN +L++ +GNYV+QYI+ LKIP A +
Sbjct: 114 THRHGCCVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASL 173
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
++Q G Y LS+ K SS+VV+KC L+ EE I++E + P QL+ DP+ NYVIQ
Sbjct: 174 MSQFEGNYVHLSMQKFSSHVVEKC-LKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQ 232
Query: 527 TAWDVSQG 534
+A +V++G
Sbjct: 233 SALEVTKG 240
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 183/325 (56%), Gaps = 8/325 (2%)
Query: 210 HLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNP 269
HL S + SSR F + S + EL+ + +AKD+ G RFLQ V++
Sbjct: 363 HLPSRSENSSRSFVFDDDDVQQNLMNFGSCLPELQSYMFHMAKDQNGGRFLQGMVEKGTV 422
Query: 270 IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDL 329
D+EM+ + VID++ ELM N+L+QKL+ ++Q +++L + +L+R +
Sbjct: 423 EDMEMVFNGVIDNVVELMMDPFGNYLVQKLLEFCRDDQRLQIVLMLTKVPGQLVRTSFNT 482
Query: 330 SGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
G+R +QKL+ +R+Q+ +L+ SA+ + L K +GNHVI+RCL +
Sbjct: 483 HGTRSVQKLIST--LKSRRQI-----ALVRSAILPGFLDLVKDLNGNHVIQRCLSCWSVQ 535
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ + + + D+AT + GCC+LQ CI ++ + +L+ ++ + + L++ YGNY
Sbjct: 536 DNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKEICKHGFSLAQDPYGNY 595
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
V+QYI+ L+IP A + Q G Y LS K SS+VV+KCL+ E ++ I+ E++
Sbjct: 596 VIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLIYIVETRAR-IVQELLSV 654
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQG 534
P +L+ DPY NYV+Q A + ++G
Sbjct: 655 PHFERLLQDPYANYVVQKALEYTKG 679
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 180/326 (55%), Gaps = 14/326 (4%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G + +A+D+ GCR LQ++++ + + +L EV+D+L LM N+L QKL+
Sbjct: 262 QILGNVASIAQDQTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMTDPFGNYLCQKLMS 321
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V + EQ+ ++I + + + + IC ++ G+R +QKL++ ++ + +
Sbjct: 322 VCDSEQLGQII---TACEPQFIPICLNMHGTRAIQKLIEV--------VSGTNVGRITAI 370
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V L +GNHVI++CL D + + + + E+C+ LAT R GCC++Q CI
Sbjct: 371 LSAGVVELINDLNGNHVIQKCLVALSSDECEFIYKAMNEHCVGLATHRHGCCVMQRCIDA 430
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
A Q+ARL+ + A L E +YGNYV+QY+L L+ V A +VA L S K
Sbjct: 431 ASVPQRARLVDTIAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLTRFSKHK 490
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVSQGRRIRQ 539
SSNVV++CL+ + +++ + P V LILDP+GNYVIQ +V+Q + Q
Sbjct: 491 FSSNVVERCLIFCPSSVRSNLVSRFLNLPFTVLHDLILDPFGNYVIQRVLNVAQPDELAQ 550
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L D++ + L+ GK + AK+
Sbjct: 551 -LLDIIQPHLEELKLVSSGKRIAAKI 575
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 181/295 (61%), Gaps = 10/295 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+AKD+ GCR LQK V E ++ ++I E+ID + EL N+++QK
Sbjct: 214 SMVEIYGSVNLMAKDQIGCRVLQKLVKEGTILEAKVIFHEIIDHVVELSMDPFGNYIVQK 273
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ V +EEQ T ++ + + + L++IC + G+RV+QK++ + T++Q +L+
Sbjct: 274 LLDVSDEEQRTMIVSVLTLTPRELIKICLNTYGTRVVQKMIKTVK-------TKQQIALV 326
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
S LK ++L +G+HV++ CL+ P+ TK +LE + C ++AT R GC +LQ C
Sbjct: 327 KSGLKPGFLALVNDLNGSHVLQSCLEFLGPNDTKFVLEAATKYCAEIATHRHGCRVLQCC 386
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ Q RL+A+++ N++ LS+ +GNYVVQ ++ ++ V +++ Q Y L+
Sbjct: 387 LINTVGPQNDRLVAEILRNSHHLSQDPFGNYVVQCLIEQQVSAV--NLLVQFRTHYAELA 444
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
K SS+V++KCL + E ++ I+ E++ P QL+ DPYGNYVIQTA V++
Sbjct: 445 TQKFSSHVIEKCLRKYPESRAE-IVRELLSIPNFEQLLQDPYGNYVIQTALSVTK 498
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 177/323 (54%), Gaps = 16/323 (4%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R SY S E G I +AKD+ GCR LQ+ ++ +NP ++ I E +D++ ELM
Sbjct: 628 NRDSYLSPIEFSGNIFNIAKDQTGCRILQRILERKNPRHVQEIYREALDNIVELMVDPFG 687
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L QKL+ V EQ+ ++I + +L+ + G+R +QKL++ P
Sbjct: 688 NYLCQKLMEVCTSEQIERIIDAAAD---QLVSASVSVHGTRTVQKLIEMIRTPA------ 738
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q + AL+N ++L K +GNHV+++CL + + + I NC++++T R GC
Sbjct: 739 -QIAKATRALQNSVITLIKDINGNHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGC 797
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
C++Q CI A E+QKA I + + L + ++GNYVVQY+L L +V D+V +L
Sbjct: 798 CVIQRCIDSANEQQKALFIRHITDHTLELVQDAFGNYVVQYVLNLGREKVNLDIVHRLLP 857
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWD 530
L+ K +SNVV+KCL +IN+I+R + + +LILD +GNYVIQ A
Sbjct: 858 NLEELATQKFASNVVEKCLTIGSSRCRKILINDILRRGKDSMKKLILDRFGNYVIQRALS 917
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQ 553
V+ L LV P+++
Sbjct: 918 VAS----EPELTKLVEGIKPYIK 936
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 180/329 (54%), Gaps = 11/329 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK++ERN I++I E + ELM N+L QKL+
Sbjct: 595 RQEIYGLCKDQHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGNYLCQKLLEFC 654
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + + +++I + G+R +QK++ E+ + T EQ +++ AL
Sbjct: 655 NDEQRNTLVRNATPA---MVQIAFNQHGTRALQKMI---EFIS----TDEQTQMIIQALS 704
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 705 GEVVDLIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHAS 764
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK LI + A+++ L + +GNYV+QYIL L T + + LS+ K S
Sbjct: 765 GFQKVDLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQKFS 824
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + + +I E++ ++ L+ D +GNYVIQTA + + + L +
Sbjct: 825 SNVIEKCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPA-ELCMHLIE 883
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
++ P ++ YG+ +++KV ++R
Sbjct: 884 MMRPLLPSIRQTPYGRRIMSKVGERESRL 912
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 179/337 (53%), Gaps = 14/337 (4%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + KD+ GCRFLQKK++ER P +++I E + ELM N+L QKL+
Sbjct: 601 RQEIYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQKLLEFA 660
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
N+EQ L+ + + ++ I + G+R +QK++ E+ + T+EQ +++ AL
Sbjct: 661 NDEQRNTLVRNACPA---MVSIALNQHGTRALQKMI---EFIS----TEEQTEMIIQALS 710
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L + +GNHVI++CL + + + + E+C+ + T R GCC+LQ CI A
Sbjct: 711 GQVVDLIQDLNGNHVIQKCLNHLKSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHAS 770
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
QK L+ + A+++ L + +GNYVVQYIL L T + G+ LS K S
Sbjct: 771 GYQKVDLVRKITAHSFHLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFS 830
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
SNV++KC+ + +I E+ E+ L+ D YGNYV+QTA + + L +
Sbjct: 831 SNVIEKCIRCAEMSAKQMLIEELCDVEELEHLMRDSYGNYVVQTALEFAPPALCIH-LIE 889
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNR---FHNRVA 577
++ P ++ YG+ + +KV+ + R F R A
Sbjct: 890 IMRPILPSIRQTPYGRRIQSKVQEREGRLAAFTGRAA 926
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
DL + L D+ GC LQ + E + + + L +GNY+ Q
Sbjct: 595 DLKTMPRQEIYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQ 654
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIRHPE 511
+L + +V +++L + + +QK + S EEQ+ II + +
Sbjct: 655 KLLEFANDEQRNTLVRNACPAMVSIALNQHGTRALQKMIEFISTEEQTEMIIQAL--SGQ 712
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+V LI D GN+VIQ + + Q ++D V ++ + +H +G VL +
Sbjct: 713 VVDLIQDLNGNHVIQKCLNHLKSSEA-QFIFDAVGEHCVIVGTHRHGCCVLQR 764
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 168/287 (58%), Gaps = 10/287 (3%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+AKD+ GCR+LQ K E ++ I +I+ + +LM + N+L+Q+++ V +E Q
Sbjct: 383 MAKDKNGCRYLQDKFLE-GKHHVDAIFEGIINHIADLMISSAGNYLVQEMVEVCDEGQRL 441
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
++IL++ +++ I + G+RV+Q+L++ + ++E L++SAL+ + L
Sbjct: 442 RIILALTQDPVKMIAISLNTHGTRVVQRLIE-------KVTSRELIILIISALQPGFMLL 494
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR 429
P+G HVI++CL F + K + E A N ++A R GCC+LQ CI A+ +A
Sbjct: 495 VNDPNGTHVIQKCLANFGAEDNKFIFEGAAANYFNMAVQRHGCCVLQKCISTARGRYQAN 554
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
LI + A+ + L++ +GNYVVQ++L KIP A + + G+Y LS K SSNVVQ+
Sbjct: 555 LIVKICAHGFELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYIYLSKQKVSSNVVQR 614
Query: 490 CLLESGEEQSTGIINE--IIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
C+ ++ I++E ++R QL+ DPY NYVI TA + ++G
Sbjct: 615 CIEFFPDDAKAVIVHEFLLLRGSHFEQLVTDPYANYVINTALNNTRG 661
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 208/398 (52%), Gaps = 24/398 (6%)
Query: 188 ATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHH---RTSYSSIEELR 244
A T N S ++LS L ++++L + SS Y + H R + + E L
Sbjct: 172 AVTFNIDKSLASLS---LQNNNNLDTFNPTSSSTTPIYPKKSHEKELVTRLNSTPFEALT 228
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I+ ++KD+ GCRFLQ+K+DE + + I ++ ELM N+L+QKL+
Sbjct: 229 DEIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCT 288
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
+ L+ S L + + G+R +QK++D T Q SL+ +LKN
Sbjct: 289 NHEKDLLL---EQSAPDLFSVALNQHGTRALQKIIDCLG-------TNYQFSLVRDSLKN 338
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
V L + +GNHV+++C+ KF + +++ I + + ++T + GCC+LQ C+ +
Sbjct: 339 HVVELIQDLNGNHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQ 398
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+Q +L +++ANA VL + +GNYVVQY+L + + +V Q+ LS+ K SS
Sbjct: 399 QQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSS 458
Query: 485 NVVQKCLLESGEEQS-TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR---RIRQT 540
NV++KCL + S ++ EI+R + LI D YGNYV+QTA DV+ R+ QT
Sbjct: 459 NVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKFRLIQT 518
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
+ ++ PF++S Y + + +K+ N+ N AM
Sbjct: 519 VKPML----PFIKSTPYSRRIQSKISVVLNQNANLNAM 552
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 208/398 (52%), Gaps = 24/398 (6%)
Query: 188 ATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHH---RTSYSSIEELR 244
A T N S ++LS L ++++L + SS Y + H R + + E L
Sbjct: 160 AVTFNIDKSLASLS---LQNNNNLDTFNPTSSSTTPIYPKKSHEKELVTRLNSTPFEALT 216
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I+ ++KD+ GCRFLQ+K+DE + + I ++ ELM N+L+QKL+
Sbjct: 217 DEIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCT 276
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
+ L+ S L + + G+R +QK++D T Q SL+ +LKN
Sbjct: 277 NHEKDLLL---EQSAPDLFSVALNQHGTRALQKIIDCLG-------TNYQFSLVRDSLKN 326
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
V L + +GNHV+++C+ KF + +++ I + + ++T + GCC+LQ C+ +
Sbjct: 327 HVVELIQDLNGNHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQ 386
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+Q +L +++ANA VL + +GNYVVQY+L + + +V Q+ LS+ K SS
Sbjct: 387 QQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSS 446
Query: 485 NVVQKCLLESGEEQS-TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR---RIRQT 540
NV++KCL + S ++ EI+R + LI D YGNYV+QTA DV+ R+ QT
Sbjct: 447 NVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKFRLIQT 506
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
+ ++ PF++S Y + + +K+ N+ N AM
Sbjct: 507 VKPML----PFIKSTPYSRRIQSKISVVLNQNANLNAM 540
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 185/330 (56%), Gaps = 11/330 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y + +R ++ AKD R LQ + + + I+ I +I ++ ELM + +
Sbjct: 111 AYGYMSGIRNTLLSRAKDRIESRLLQDVIAKGSKETIDKIFDNLISNVCELMLDPFGHRV 170
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+KL+ +EQ+T+++ V+ + +R+C D G+R +Q L+ R + EQ
Sbjct: 171 FEKLMEKCTDEQITRVLDIVLQQPLQFVRLCVDSHGTRAIQDLM-------RSLCSVEQI 223
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+ ++ L ++ + L+K + N VI C F P +++ LLE I +NC +A D+ G C+L
Sbjct: 224 ARFMATLCHVALLLTKDANANLVILFCFNHFSPSHSRYLLEVIVQNCYQVAIDQHGYCML 283
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
CI + E + LI +++ N L ++ YGNYVVQY+L L+ +VT+ + L G Y
Sbjct: 284 NQCIRQSSRELRDPLIKEIITNVVRLCKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYV 343
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS K S+VVQKC LE+ E S II E++ +I L++DP+GNYVIQTAW VS+
Sbjct: 344 QLSYDKYGSHVVQKC-LENREFCSRRIIAELL--SDIDSLLVDPFGNYVIQTAWIVSED- 399
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+R L + N F++ ++YG+ +L K+
Sbjct: 400 HMRNVLLYHINRNVSFMRCNVYGRKLLQKL 429
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 174/291 (59%), Gaps = 9/291 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
+G I ++A+D+ GCR LQ+K+ + NP ++E I EV++ + L+ N+L+QK++
Sbjct: 1090 KGNIEMIARDQIGCRMLQRKLSDANPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEQC 1149
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD-AGEYPTRQQLTQEQQSLLVSAL 362
E Q+ +L+ + + RL+ IC G+R +QKL++ P T E L++AL
Sbjct: 1150 EEPQLLQLVRKI---RPRLVDICLSPHGTRAVQKLIEVCAGLPINSTATNE----LLAAL 1202
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
+ V L+K + NHV+++ L FP + + ++ ++C++++T+R GCC++Q CI A
Sbjct: 1203 RPSIVLLAKDVNANHVVQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCVMQRCIDAA 1262
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
K+ ++ ++ ANA L + ++GNYVVQY+L L+I V L G LS+ K
Sbjct: 1263 PPRAKSEILQEIAANALELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKF 1322
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVS 532
SSNVV+KCL+ EQ + I++E++ E ++ ++LD Y NYVIQ A VS
Sbjct: 1323 SSNVVEKCLMLGTPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVS 1373
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 92/224 (41%), Gaps = 50/224 (22%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ LR I+L+AKD +ANH++QK+
Sbjct: 1199 LAALRPSIVLLAKD------------------------------------VNANHVVQKI 1222
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + + V ++ + I + G VMQ+ +DA + ++ QE +
Sbjct: 1223 LSSFPAARCEFVFAQV---KKHCVEISTERHGCCVMQRCIDAAPPRAKSEILQE---IAA 1276
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ L + GN+V++ L + + + + +L+ + +++ C+
Sbjct: 1277 NALE-----LMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNVVEKCL 1331
Query: 420 PLAQEEQKARLIADVVANAYVLSE---HSYGNYVVQYILGLKIP 460
L EQ++ ++ +++A+ L + SY NYV+Q L + P
Sbjct: 1332 MLGTPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVSSP 1375
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 155/243 (63%), Gaps = 7/243 (2%)
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+L+QKL+ V NEEQ ++++ + L+RI + G+RV+QKL++ TRQQ++
Sbjct: 6 GNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIET--LKTRQQIS 63
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+ ++SAL+ ++L K +GNHVI+RCLQ + K + A+ C+++AT + G
Sbjct: 64 R-----VISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHG 118
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
CC+LQ CI + E + L+A++ +N ++L++ ++GNYVVQ+IL LKIP T++++AQ
Sbjct: 119 CCVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFE 178
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
G Y LS + SS+VV+KCL EE + I++E++ QL+ P+ NYVIQ A V
Sbjct: 179 GNYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKALQV 238
Query: 532 SQG 534
+G
Sbjct: 239 YEG 241
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 110/221 (49%), Gaps = 18/221 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDE-RNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+ E G ++ ++ + G R +QK ++ + I ++S + L++ + NH+IQ+
Sbjct: 29 LTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRVISALEPGFLALIKDLNGNHVIQR 88
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL--DAGEYPTRQQLTQEQQS 356
+ L++E K I V++ + + I G V+Q+ + GEY
Sbjct: 89 CLQCLSKED-NKFIF--VAAAKYCVEIATHQHGCCVLQRCISHSTGEYREN--------- 136
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
LV+ + + L++ GN+V++ L+ P T +L+ + N + L+T R +++
Sbjct: 137 -LVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHVVE 195
Query: 417 YCIPLAQEEQKARLIADVVANAYV--LSEHSYGNYVVQYIL 455
C+ + EE ++R++ ++++ ++ L +H + NYV+Q L
Sbjct: 196 KCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL 236
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 28/343 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 621 LESYSGEIYGMCKDQHGCRYLQRKLEEGIPEHVQIIFRETQMHVVELMTDPFGNYLCQKL 680
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 681 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 730
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 731 NALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 790
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQY-----------------ILGLKIPQV 462
A +Q+A+LI + ++Y L + +GNYV+QY I+ L P
Sbjct: 791 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICTFASLLLSYIIILTGIVDLGEPLF 850
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGN 522
T + A G ALS K SSNV++KC+ S I E++ E+ ++ D + N
Sbjct: 851 TGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLLPHELPNMLRDSFAN 910
Query: 523 YVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
YVIQTA D + R TL + V P ++S +G+ + K+
Sbjct: 911 YVIQTAMDFADPES-RNTLIEAVRPLLPGIRSQPHGRRIAGKI 952
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 176/298 (59%), Gaps = 8/298 (2%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+ S+ + + I +AKD+ GCRFLQ+ V E DI M+ +I ++ ELM N+L+
Sbjct: 346 FYSVPDAQCYIYNMAKDQNGCRFLQRMVAEGTYQDICMVFEGIIGNVVELMIDSFGNYLV 405
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V ++Q +++L + + +L+R+ + G+RV+QKL++ + EQ S
Sbjct: 406 QKLLDVCTDDQRLQIVLMLTNHPAQLVRVSLNTHGTRVVQKLIET-------LTSTEQVS 458
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L+ SA++ + L K +GNH+I+RCLQ + + + + C+++AT + GC +LQ
Sbjct: 459 LVKSAIQPGFLDLIKDLNGNHLIQRCLQCLSCQDNQFIFDAAVKFCVEIATHQHGCFVLQ 518
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI + + + +L+ ++ + +L++ ++GNYVVQY++ V+A +++Q +
Sbjct: 519 RCIHHSVGKNRDKLVTEICKHGLLLAQDAFGNYVVQYVIESDTAAVSAKLLSQFKENFVM 578
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
LS K SS+VV+KCL G+ +S I+ E++ P QL+ D Y NYVIQ+A ++G
Sbjct: 579 LSTQKFSSHVVEKCLQHIGDSRSR-IVRELLSVPRFEQLLQDQYANYVIQSALLFTKG 635
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 171/291 (58%), Gaps = 9/291 (3%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
+G I ++A+D+ GCR LQ+K+ E +P ++E I EV++ + L+ N+L+QK++
Sbjct: 1111 KGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEEC 1170
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD-AGEYPTRQQLTQEQQSLLVSAL 362
E Q+ +L+ + + RL+ IC G+R +QKL++ P T E L++AL
Sbjct: 1171 EEPQLLQLVRKI---RPRLVDICLSPHGTRAVQKLIEVCAGLPAGSAATNE----LLAAL 1223
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
+ V L+K + NHV+++ L FP + ++ +NC++++T+R GCC++Q CI A
Sbjct: 1224 RPSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAA 1283
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
K+ ++ ++ ANA L + ++GNYVVQ +L L+I V + G LS+ K
Sbjct: 1284 PPRAKSEILQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKF 1343
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVS 532
SSNVV+KCL+ EQ I++E++ + ++ L+LD Y NYVIQ A VS
Sbjct: 1344 SSNVVEKCLVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS 1394
>gi|19113974|ref|NP_593062.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|1351595|sp|Q09829.1|YAD3_SCHPO RecName: Full=Pumilio domain-containing protein C4G8.03c
gi|1022348|emb|CAA91204.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 780
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 178/324 (54%), Gaps = 17/324 (5%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G + + KD+ GCR+LQK +DE ++ + E+ + +LM N++ QKL +
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ ++ + + ++ IC +L G+R MQ ++D + + EQ SLL+ +
Sbjct: 525 REQKLSMLNGI---GEGIVDICSNLYGTRSMQNIID-------KLTSNEQISLLLKIIIP 574
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+L+ +G HV+++C+ KFPP+ + L + EN + LAT+R GCC+LQ C+
Sbjct: 575 SLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNG 634
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+ + RL+ ++ + +L +++YGNY+VQ++L L I T ++ + G LSL K SS
Sbjct: 635 DIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSS 694
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ---TAWDVSQGRRIRQTL 541
N +++C+ + ++ E + P I QL+ D Y NYV+Q D SQ I +++
Sbjct: 695 NAIEQCIRTASPSTREQMLQEFLSFPNIEQLLDDCYANYVMQRFLNVADESQKFLILRSI 754
Query: 542 YDLVVDNSPFLQSHMYGKNVLAKV 565
++ P +Q+ +G+++LAK+
Sbjct: 755 SHVI----PKIQNTRHGRHILAKL 774
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 178/338 (52%), Gaps = 14/338 (4%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G + +A+D+ GCR LQ++++ + +L EV+D+L LM N+L QKL+
Sbjct: 288 QILGNVAAIAQDQTGCRMLQRQLECSDTAFTSAVLREVLDNLFLLMTDPFGNYLCQKLMS 347
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V + Q+ +I + + + IC ++ G+R +QKL++ ++ + + +
Sbjct: 348 VCDAGQLGDII---TGCETQFIPICLNMHGTRAIQKLIEV--------VSGNNVNRITAI 396
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V L +GNHVI++CL D + + + E+C+ LAT R GCC++Q CI
Sbjct: 397 LSAGVVELINDLNGNHVIQKCLVALSSDDCEFIYRAMNEHCVGLATHRHGCCVMQRCIDA 456
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
A Q+A+L+ + A L E +YGNYV+QY+L L+ V A +V+ L S K
Sbjct: 457 ASPTQRAKLVDTIAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVSLLCEDLTKFSKHK 516
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVSQGRRIRQ 539
SSNVV++CL+ + +++ + P V LILDP+GNYVIQ +V+Q +
Sbjct: 517 FSSNVVERCLIFCPSSVRSNLVSRFLNLPFSVLHDLILDPFGNYVIQRVLNVAQPDELAH 576
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVA 577
L D++ + L+ GK + AK+ + N +
Sbjct: 577 -LLDIIQPHLEELKLVSSGKRIAAKISRKSSSLENSLT 613
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 178/338 (52%), Gaps = 28/338 (8%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
GR+ L+A+D+QG R+LQ ++D +N D +I E EL N+L QKL N
Sbjct: 564 GRMALMARDQQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFEHCN 623
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ +LI S +L ++C D G+RV+QK+++ P E +L+ A+
Sbjct: 624 REQRLELIRQSAS---QLAQVCMDPHGTRVVQKMIELTVEP-------EHAALIAQAISP 673
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+SL +GNHVI+RCLQ+ + + + L++A R GCC+LQ C+ A
Sbjct: 674 HCLSLMCDVNGNHVIQRCLQRMDVPLRRFIYDTALTRYLEIARHRHGCCVLQRCLDHATA 733
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
EQ++ L A ++ +AY L + +GNYVVQY+L LK P T ++ ++ G + LS+ K SS
Sbjct: 734 EQRSNLCALILNSAYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSS 793
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQ-----------------LILDPYGNYVIQT 527
NVV+K + E +++E++ P+ V+ L+ DPY NYV+Q
Sbjct: 794 NVVEKVFTMANERDLRSLLHELLEGPQSVESMPLQVGSEQHQRNIRPLLFDPYANYVVQR 853
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
A ++ + + L + + + L+ +GK + A++
Sbjct: 854 ALSLAPS-PVFEALREAIQPHLAELRGTPFGKRIQARL 890
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 190/339 (56%), Gaps = 25/339 (7%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S++++ G+I +++D+ GCRFLQK+++E + +++I SEVI+ + +LM N+L QK
Sbjct: 34 SVQQVVGQIFSLSRDQLGCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQK 93
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD---AGEYPTRQQLTQEQQ 355
L+ N EQ ++ V L+ I ++ G+R QKL++ + YPT ++
Sbjct: 94 LLDYCNPEQRAAIVSRVAP---HLVPISLNIHGTRAAQKLIERLGSDHYPTEAEI----- 145
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+V+ LK + L + +GNHV++RCLQK + + + + +A++C+ +A+ R GCC+
Sbjct: 146 QAVVNHLKGGVIQLIQDLNGNHVVQRCLQKLDAKHNQFIYDAVAQHCILVASHRHGCCVF 205
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR-- 473
Q C+ A EQK +++ VV L + YGNYVVQY+L QVT ++ +
Sbjct: 206 QRCVDFATPEQKHQVVMQVVEKTVQLVQDQYGNYVVQYVL----EQVTFLLLVCASSHSP 261
Query: 474 -------YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
Y + K SSNVV+KCL + E ++ ++ + +I+ L+ DPY NYVIQ
Sbjct: 262 PTYQVPAYRPNIVQKFSSNVVEKCLQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQ 321
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
A V+ ++ + L D + + +++ YG+ + ++V
Sbjct: 322 RALQVATSPQL-EMLLDAIKPHLSAIRNTSYGRKIQSRV 359
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 174/333 (52%), Gaps = 18/333 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E G I + KD+ GCR+LQ+K++E P +++I E + ELM N+L QKL
Sbjct: 583 LENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKL 642
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI L++I + G+R +QK+++ P EQ ++
Sbjct: 643 LEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTP-------EQIQTVI 692
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL V L + +GNHVI++CL + + + + + + C+ + T R GCC+LQ CI
Sbjct: 693 HALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCI 752
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV------AQLAGR 473
A +Q+A+LI + ++Y L + +GNYV+QYI L + + AQL+
Sbjct: 753 DHASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICRLTSSTWILESLFLPGHFAQLSRE 812
Query: 474 YF-ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
ALS K SSNV++KC+ S I E++ E+ ++ D + NYVIQTA D +
Sbjct: 813 ASPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFA 872
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R TL + V P ++S +G+ + K+
Sbjct: 873 DPES-RNTLIEAVRPLLPGIRSQPHGRRIAGKI 904
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 175 bits (443), Expect = 7e-41, Method: Composition-based stats.
Identities = 111/290 (38%), Positives = 171/290 (58%), Gaps = 12/290 (4%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G I +AKD+ GCR LQ+ ++++NP IE I +E +D + ELM N+L QKL+ V
Sbjct: 826 GNICKIAKDQTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVDPFGNYLCQKLMEVCT 885
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ+ K+I S +L+ + G+R +QKL++ + P++ + T + ALKN
Sbjct: 886 SEQIEKII---DKSSDQLINASISVHGTRTVQKLIEMIKTPSQIKKTTK-------ALKN 935
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
++L K +GNHV+++CL + E I NC++++T R GCC++Q CI A E
Sbjct: 936 SIITLIKDINGNHVVQKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVIQRCIDSANE 995
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
QK I ++ NA L + ++GNYVVQYIL L +V ++ +L L++ K SS
Sbjct: 996 AQKELFIRNISNNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIEELAVQKFSS 1055
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVS 532
NVV+KCL+ + IINEI++ + + Q+ILDP+GNYVIQ A V+
Sbjct: 1056 NVVEKCLIIGNNKCRKLIINEILKKDKDILKQIILDPFGNYVIQRALSVA 1105
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 171/290 (58%), Gaps = 12/290 (4%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
+G I ++A+D+ GCR LQ+K+ E +P ++E I EV++ + L+ N+L+QK++
Sbjct: 183 KGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEEC 242
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
E Q+ +L+ + + RL+ IC G+R +QKL++ P T E L++AL+
Sbjct: 243 EEPQLLQLVRKI---RPRLVDICLSPHGTRAVQKLIE----PAGSAATNE----LLAALR 291
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
V L+K + NHV+++ L FP + ++ +NC++++T+R GCC++Q CI A
Sbjct: 292 PSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAP 351
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
K+ ++ ++ ANA L + ++GNYVVQ +L L+I V + G LS+ K S
Sbjct: 352 PRAKSEILQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFS 411
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVS 532
SNVV+KCL+ EQ I++E++ + ++ L+LD Y NYVIQ A VS
Sbjct: 412 SNVVEKCLVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS 461
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 102/224 (45%), Gaps = 14/224 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++R R++ + G R +QK ++ +L+ + + L + +ANH++QK+
Sbjct: 251 VRKIRPRLVDICLSPHGTRAVQKLIEPAGSAATNELLAALRPSVVLLAKDVNANHVVQKI 310
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + + V ++ + I + G VMQ+ +DA + ++ QE +
Sbjct: 311 LSSFPASRCDFVFAQV---KKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQE---IAA 364
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ L + GN+V++ L + + I + +L+ + +++ C+
Sbjct: 365 NALE-----LMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCL 419
Query: 420 PLAQEEQKARLIADVVANAYVLSE---HSYGNYVVQYILGLKIP 460
L EQ+ ++ +++A L + SY NYV+Q L + P
Sbjct: 420 VLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVSSP 463
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 197/373 (52%), Gaps = 33/373 (8%)
Query: 223 NFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKV------------------ 264
N+ R ++ + IE+ +G I+ + D+ GCRFLQ+++
Sbjct: 454 NYRHRKGEDANKYQNAKIEDYKGHILDLCGDQHGCRFLQRELIKEQEGIAKGEGNKADEL 513
Query: 265 DERNPID---IEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR 321
D + +D M+ +E+ DD+ LM N+LIQKL+ + +EQ +LI S+ +
Sbjct: 514 DNKEKVDESLATMVFNELDDDIVNLMLDSFGNYLIQKLVECITDEQRLELI---KKSRSQ 570
Query: 322 LLRICDDLSGSRVMQKLLD-AGEYPTR-----QQLTQEQQSLLVSALKNITVSLSKSPHG 375
RI D G+R +QKL++ G+ +L E L++ +L VSLSK +G
Sbjct: 571 FNRIALDSHGTRALQKLIECVGKTKDEADVKGDELQDESARLIIESLAPTIVSLSKDLNG 630
Query: 376 NHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVV 435
NHV+++CL + + + + I +NC +A R GCC+LQ C+ +Q L ++
Sbjct: 631 NHVVQKCLISLSNETNQVIYDTIKDNCEVVACHRHGCCVLQRCLDYGNNQQIDALSHEIT 690
Query: 436 ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESG 495
+ + YGNYVVQY+L Q + A L ++ LS+ K SNV++K L +
Sbjct: 691 TKLDIFTADPYGNYVVQYVLTHGDRQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSLRLNN 750
Query: 496 EEQSTGIINEIIR--HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQ 553
+QS+ +I+E+++ + ++++ D YGNYV+QT DV+Q ++ + L +++V P ++
Sbjct: 751 TKQSSILIDELLKLSSDQFLKVLNDSYGNYVLQTCLDVAQLDQMTK-LNEVLVPLLPDIK 809
Query: 554 SHMYGKNVLAKVR 566
S +GK ++ K++
Sbjct: 810 STPHGKRIVNKLQ 822
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 195/327 (59%), Gaps = 14/327 (4%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+A+D+ GCR LQK V+E +D ++I E+ID + EL N+++QK
Sbjct: 210 SMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQK 269
Query: 299 LIGVLNEEQMTKLILSVVSSQQR-LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L+ V +EEQ T +I+SV++S+ R L++IC + +G+RV+QK++ + T++Q +L
Sbjct: 270 LLVVSDEEQRT-MIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVK-------TKQQIAL 321
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ SAL+ + L +G HV++ CL+ P+ K ++E E C LAT + GC +LQ
Sbjct: 322 VKSALEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQC 381
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ Q RL+A++ ++ LS+ +GNYVVQ ++ ++ V +++ L
Sbjct: 382 SLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIEL 439
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+ K SS+V++KCL + E ++ I+ E++ +P QL+ DPY NYVIQTA V++G +
Sbjct: 440 ATQKFSSHVIEKCLRKYPESRAE-IVRELLSYPNFEQLLQDPYANYVIQTALSVTKG-AV 497
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAK 564
R L + V LQS+ Y K + +K
Sbjct: 498 RARLVEKVKRFGK-LQSNPYCKKIFSK 523
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 179/320 (55%), Gaps = 11/320 (3%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I+ KD+ GCR+LQ+ ++++N I+ + +E L LM N+L QKL +E
Sbjct: 348 ILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASEA 407
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q + I + +L+ I ++ G+R +QK++D P +Q S +V+AL+
Sbjct: 408 QRSTFIQIIA---PKLVPISFNMHGTRALQKIIDLVSSP-------DQISCIVNALRPNV 457
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
V L+K +GNHVI++CL KF + + + + I E+ LD++T R GCC++Q C A Q
Sbjct: 458 VLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQ 517
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+L+ +V +A L + ++GNYV+QY+L L P T +++ + ALS K SSNV
Sbjct: 518 IEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNV 577
Query: 487 VQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV 546
++KC+ + +I+E++ + +L+ D + NYVIQTA D + ++ R L + +
Sbjct: 578 MEKCIFFAPAAIKEKLISELMDEKHLPKLLRDSFANYVIQTALDNASVKQ-RAELVERIK 636
Query: 547 DNSPFLQSHMYGKNVLAKVR 566
P +++ G+ +L+K+
Sbjct: 637 PLIPSIKNTPCGRRILSKLE 656
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 21/353 (5%)
Query: 191 NNASPSYS-NLSHGFLSDHHHLGSSTNASSRYNNFYA--------RARHHHHRTSYSSIE 241
N S YS N SH +L++ +G Y + + + + Y +
Sbjct: 398 NAESIGYSVNQSHSYLANEPMIGEKIRKKKEYKHAHKDFNDKTLISKKSNISNDDYLDLT 457
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+ G + +AKD+ CR LQK +D++N I+ I +E ++ + ELM N+L QKLI
Sbjct: 458 AISGNVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIE 517
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V EQ+ K+I S L+ + G+R +QKL++ + P+ Q + ++
Sbjct: 518 VCTPEQIEKII---DKSSDELINASISVHGTRTVQKLIEMIKTPS-------QIRKITNS 567
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
LKN + L K +GNHV+++CL + +EI +N ++++T R GCC++Q CI
Sbjct: 568 LKNSIIILIKDINGNHVVQKCLGTLSSIQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDS 627
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
A E QK LI + +N+ L + ++GNYVVQYIL + +V +++ +L ++ K
Sbjct: 628 ANEAQKELLINKISSNSLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQK 687
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVS 532
SSNV++KCL+ + +IN +++ + V +ILD YGNYVIQ A V+
Sbjct: 688 FSSNVIEKCLIIGTTKCRKIMINGLLKKGKNVLKNVILDKYGNYVIQRALSVA 740
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 37/202 (18%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L+ II++ KD G +QK + + I I E++ + E+ H+ +IQ+ I
Sbjct: 568 LKNSIIILIKDINGNHVVQKCLGTLSSIQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDS 627
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL------------ 350
NE Q LI + S+ L++ D G+ V+Q +L+ G ++
Sbjct: 628 ANEAQKELLINKISSNSLELVQ---DAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHA 684
Query: 351 ----------------TQEQQSLLVSAL----KNITVSLSKSPHGNHVIKRCLQKFP-PD 389
T + + ++++ L KN+ ++ +GN+VI+R L P P+
Sbjct: 685 VQKFSSNVIEKCLIIGTTKCRKIMINGLLKKGKNVLKNVILDKYGNYVIQRALSVAPEPE 744
Query: 390 YTKDLLEEIAENCLDLATDRSG 411
TK L+E I +L SG
Sbjct: 745 LTK-LVEGIKPYIKELRNINSG 765
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 12/298 (4%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y + + G + +AKD+ CR LQK +D++N I+ I +E ++ + ELM N+L
Sbjct: 628 YLDLTTISGNVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLC 687
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKLI V EQ+ K+I S L+ + G+R +QKL++ + P+ Q
Sbjct: 688 QKLIEVCTPEQIEKII---DKSSDELINASISVHGTRTVQKLIEMIKTPS-------QIR 737
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+ ++LKN + L K +GNHV+++CL + +EI +N ++++T R GCC++Q
Sbjct: 738 KITNSLKNSIIILIKDINGNHVVQKCLVTLSSTQCNFIYDEILKNFVEVSTHRHGCCVIQ 797
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A E QK LI + +N L + ++GNYVVQYIL + +V +++ +L
Sbjct: 798 RCIDSANEAQKELLINKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEK 857
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV--QLILDPYGNYVIQTAWDVS 532
++ K SSNV++KCL+ + +IN +++ + + +ILD YGNYVIQ A V+
Sbjct: 858 HAVQKFSSNVIEKCLIIGTTKCRKMMINGLLKKGKNILKNVILDKYGNYVIQRALSVA 915
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+E+ + V+ GC +Q+ +D N E++++++ + EL++ N+++Q ++
Sbjct: 777 DEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLINKISSNCLELVQDAFGNYVVQYIL 836
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQQLTQEQQS 356
+ NE+ ++I ++LL+ + + S V++K L G R+ +
Sbjct: 837 NMGNEKVNFEII-------EKLLKDIEKHAVQKFSSNVIEKCLIIGTTKCRKMMING--- 886
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFP-PDYTK 392
L+ KNI ++ +GN+VI+R L P P+ TK
Sbjct: 887 -LLKKGKNILKNVILDKYGNYVIQRALSVAPEPELTK 922
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 443 EHSYGNYVVQYILGLKIPQVTADVV--AQLAGRYFALSLGKCSSNVVQKCLLESGEEQST 500
+HS+ N+ + +L K D + ++G + ++ + +QK L + +
Sbjct: 605 KHSHKNFNDKTLLSKKSNISNDDYLDLTTISGNVYKIAKDQSKCRTLQKILDKKNQSCID 664
Query: 501 GIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
I NE + H I++L++DP+GNY+ Q +V +I + +
Sbjct: 665 EIYNEALEH--IIELMMDPFGNYLCQKLIEVCTPEQIEKII 703
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 166/298 (55%), Gaps = 9/298 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKV--DERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
S E+++GR+ ++KD+ GCR LQ+++ D+R + ++I E + L E+M N+L
Sbjct: 524 SEEDIKGRVYSMSKDQNGCRLLQEQLEYDDRKTL-WQIIFQESLHHLPEMMVDPFGNYLF 582
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA---GEYPTRQQLTQE 353
QKLI +E Q ++ +V L+ +L G+R +QK+++ + + + +
Sbjct: 583 QKLIARADEWQRLAIVRAVCP---HLMAAALNLHGTRSVQKVVEICAISQSEKKDATSID 639
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
L+V ALK+ V L +GNHVI+R LQ F P +T+ + + ++ C + T R GCC
Sbjct: 640 LPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCC 699
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ C+ A QK LIA V +A L + YGNYVVQY+L + ++ + G
Sbjct: 700 VLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGH 759
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
F LS+ K SSNVV+KCL ++ E + E+I ++ +L+ D + NYV+Q A V
Sbjct: 760 VFELSIQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQDQFANYVVQRALCV 817
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ--EQQSLLVSALKNI 365
+T L +S + R+ + D +G R++Q+ L EY R+ L Q Q+SL L +
Sbjct: 518 LTTLSISEEDIKGRVYSMSKDQNGCRLLQEQL---EYDDRKTLWQIIFQESL--HHLPEM 572
Query: 366 TVSLSKSPHGNHVIKRCLQKFPP----DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
V P GN++ ++ + + + + + L+L RS +++ C +
Sbjct: 573 MVD----PFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICA-I 627
Query: 422 AQEEQK-------ARLIADVVANAYV-LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+Q E+K +LI + + V L S GN+V+Q L P+ T + ++
Sbjct: 628 SQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRE 687
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
+ + V+Q+CL + Q +I ++ H ++L+ DPYGNYV+Q D
Sbjct: 688 CTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYH--AMKLMQDPYGNYVVQYVLDA 743
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 186/341 (54%), Gaps = 24/341 (7%)
Query: 221 YNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI 280
YN ++ R S +++++ G I + KD+ GCRFLQK++D I +E
Sbjct: 394 YNGYHQRKMEDSLIYSNATLDQFIGEIYSLCKDQHGCRFLQKQLDVMGENAANAIFNETK 453
Query: 281 DDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD 340
+ ELM N+LIQKL+ + EQ +L ++ +S+ + I + G+R +QKL++
Sbjct: 454 EHTVELMTDSFGNYLIQKLLERVTVEQ--RLEIAQISAP-YFVDIALNPHGTRALQKLVE 510
Query: 341 AGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE 400
T+E+ L+V +L+ V LSK +GNHV+++CLQK P Y + + + ++
Sbjct: 511 CVG-------TEEEAQLVVDSLQPSIVELSKDLNGNHVVQKCLQKLDPTYFQFIFDAASQ 563
Query: 401 NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP 460
+C+D+AT R GCC+LQ C+ ++Q+ L +++N LS +GNYVVQY++ +
Sbjct: 564 DCVDIATQRHGCCVLQRCLDHGNKDQRRGLCEMLLSNIDQLSIDPFGNYVVQYVITKESE 623
Query: 461 QVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIV 513
+ D +V L + LSL K SNVV+K L S +I E++++ EI
Sbjct: 624 EKAFDYSYKIVEVLKPKVKDLSLHKFGSNVVEKILKTPA--LSEPLILELLKNNDESEIQ 681
Query: 514 QLILDPYGNYVIQTAWDVSQGRR--IRQTLYDLVVDNSPFL 552
L+ D YGNYV+QTA DVS + + L D+V SP L
Sbjct: 682 MLLNDSYGNYVLQTALDVSHSTNPSLYKRLSDIV---SPLL 719
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 169/317 (53%), Gaps = 10/317 (3%)
Query: 249 LVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQM 308
++AKD+ GCRFLQ+K++E N ++ I I++ +LM N+L QKL + E+Q+
Sbjct: 537 VLAKDQGGCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQL 596
Query: 309 TKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVS 368
T++I V Q+ + +C + G+R +QK+++ + P Q LL + LK
Sbjct: 597 TEIIHKV---QEDPVGLCRNSHGTRSIQKIIETVKSPA-------QIELLANYLKEKVQE 646
Query: 369 LSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKA 428
L++ +GNHVI++ L + P + + + E C+++A + GCC++Q CI A +QK
Sbjct: 647 LAEDINGNHVIQKILFTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKL 706
Query: 429 RLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQ 488
L + + V + YGNYVVQY+L LK+ +V + +L G L + K SSNV++
Sbjct: 707 ELTLRIGDHTQVFVRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIE 766
Query: 489 KCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDN 548
KCL + ++ EI++ +LD YGNYVIQ + V+ Q + L D
Sbjct: 767 KCLEHNATNVKEAMVREILQADSFYDFLLDQYGNYVIQKSLSVAVEPYFSQFIEKLRPDI 826
Query: 549 SPFLQSHMYGKNVLAKV 565
S+ +G + ++
Sbjct: 827 ERLRHSNEFGLKIFNRL 843
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 189/356 (53%), Gaps = 35/356 (9%)
Query: 209 HHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERN 268
H + S + S Y R + + + +++ G I+ + KD+ GCRFLQ+++D
Sbjct: 353 HPMHSRKHKGSNNQKPYHRKGEDPAKYANAKLDDYIGNILSLCKDQHGCRFLQRQLDIGG 412
Query: 269 PIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDD 328
I E D + ELM N+LIQKL+ + ++Q +L V SS Q + I D
Sbjct: 413 CNAANSIYLETRDYVVELMTDSFGNYLIQKLLERVTDDQRLEL---VRSSAQSFVYIALD 469
Query: 329 LSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP 388
G+R +QKL++ T+E+ ++V +L+ V LS+ +GNHV+++CLQK P
Sbjct: 470 PHGTRALQKLVECIS-------TEEEAGIVVDSLRGSIVELSRDLNGNHVVQKCLQKLKP 522
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + + E+C+ +AT R GCC+LQ C+ +EQ +L +++A+ L+ +GN
Sbjct: 523 EDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQQLCEEIIAHVDELATDPFGN 582
Query: 449 YVVQYILGLKIPQVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIIN 504
YVVQYIL + + ++ +V L + LSL K SNVV+K L T +++
Sbjct: 583 YVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHKFGSNVVEKVL-------RTPVVS 635
Query: 505 EII--------RHPEIVQLILDPYGNYVIQTAWDVSQG------RRIRQTLYDLVV 546
E++ +I QL+ D YGNYV+QTA D+++ +R+ TL L+V
Sbjct: 636 ELMITELLNRSGDSKIDQLLHDGYGNYVLQTALDIARENNKYLYQRLSDTLKPLLV 691
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 191/362 (52%), Gaps = 48/362 (13%)
Query: 222 NNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID 281
N+FYA A + + G I + D+ GCRFLQK++D ++I +E D
Sbjct: 535 NSFYADAE----------LSQFIGNIYSICTDQYGCRFLQKQLDVLGKEAADIIFNETKD 584
Query: 282 DLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA 341
ELM N+LIQKL+ + EQ ++I++ +SS + I + G+R +QKL++
Sbjct: 585 HTVELMTDSFGNYLIQKLLERITLEQ--RIIIANISSPH-FVEIALNPHGTRALQKLVEC 641
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
E T E+ +++V +L + LSK +GNHV+++CLQK PP + + + + ++
Sbjct: 642 TE-------TDEESNIIVKSLTPSILMLSKDLNGNHVVQKCLQKMPPKHFQFIFDAACKD 694
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP- 460
+++AT R GCC+LQ C+ EEQ+ L ++ N +L+ +GNYVVQY++ +
Sbjct: 695 FIEIATHRHGCCVLQRCLDHGTEEQRHSLCNKLLENIDMLTMDPFGNYVVQYVITKESDD 754
Query: 461 ---QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII--------RH 509
T +V L + LSL K SNVV+K L T I++E + +
Sbjct: 755 NKYDFTYKIVHLLKPKVIVLSLHKFGSNVVEKLL-------RTPIVSETVILELLNKESN 807
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRR--IRQTLYDLVVDNSPFLQSHM----YGKNVLA 563
EI L+ D YGNYV+QTA +S + + + L D+V +P L + +G+ +L+
Sbjct: 808 QEIQTLLNDSYGNYVLQTALAISSNKNPYLYKKLSDIV---TPLLVGPIRNTPHGRRILS 864
Query: 564 KV 565
K+
Sbjct: 865 KL 866
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 177/315 (56%), Gaps = 19/315 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + S+++E G I + KD+ GCRFLQK++D ++I E ELM N
Sbjct: 497 RYADSTLDEFVGNIYSLCKDQHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGN 556
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L+QKLI + EQ ++ L+ ++S Q + I + G+R +QKL++ T+E
Sbjct: 557 YLMQKLIERVTTEQ--RIELAKIASPQ-FVEIALNPHGTRALQKLIECIN-------TEE 606
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L++ V LSK +GNHV+++CLQK P + + + +NC+D+AT R GCC
Sbjct: 607 EAKIIVESLRDSIVQLSKDLNGNHVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCC 666
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ +EQ +L ++++ L+ +GNYVVQY++ + + T +V
Sbjct: 667 VLQRCLDHGTKEQCEKLCDKLLSHVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHL 726
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-PEIVQLILDPYGNYVIQTA 528
L + LS+ K SNV++K L ++ +I E++ H EI L+ D YGNYV+QTA
Sbjct: 727 LKPKVAELSVHKFGSNVIEKILRTPVVTET--MILELLNHESEIQNLLNDSYGNYVLQTA 784
Query: 529 WDVSQGRRIRQTLYD 543
D+S + LYD
Sbjct: 785 LDISHEH--NKYLYD 797
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 188/343 (54%), Gaps = 19/343 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDER-NPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ + LRGR+ AKD+ GCR+LQ+ +D +P +++I+ EVI + ELM Q AN LIQ
Sbjct: 195 TADSLRGRVYETAKDQHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANFLIQ 254
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++ ++ + +++V++ Q + I G+ +QK+++ T+ + +
Sbjct: 255 KLFDIMPDD--VRYKVAIVAAPQ-ICMIALTPHGTFSVQKMIETIS-------TRAEMEI 304
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ AL V L K HGNHVI++ LQ+F D + + +A +C+ +A ++ GCC+LQ
Sbjct: 305 ICEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQR 364
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ A +QKA L+ V+A + + +GNYV+QY+L ++ + L
Sbjct: 365 CLEYASPQQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQL 424
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDV---SQ 533
S+ K SSNV++K L + + + E+ +PEI+ +LI D +GNYV+QTA + +Q
Sbjct: 425 SMNKFSSNVMEKVLRGASKPVQVLYVEEMC-NPEIISRLIQDDFGNYVLQTALTINAPAQ 483
Query: 534 GRRIRQTLYDLV--VDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
++ T+ + + N+P+ + M GK + N FH+
Sbjct: 484 AEQLVNTIRPFMPLIKNAPYAKK-MEGKMEAVARKMEGNTFHS 525
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 173/316 (54%), Gaps = 20/316 (6%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+++++ G I + KD+ GCRFLQK++D + I E + ELM N+LIQ
Sbjct: 459 ATLDQFIGNIYSLCKDQHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQ 518
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ + ++Q +L + +++ I D G+R +QKL++ T+E+ +
Sbjct: 519 KLLERVTDDQRVEL---AKIAAPKMVEISKDPHGTRALQKLIECIS-------TKEEAEI 568
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V +L+ TV LSK +GNHVI++CLQK P+ ++ + + C ++AT R GCC+LQ
Sbjct: 569 VVKSLQPDTVILSKDLNGNHVIQKCLQKLNPEDSQFIFDAAGNECGEIATHRHGCCVLQR 628
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQLAGR 473
C+ + Q L ++ +L+ +GNYVVQYI+ + + T +V QL R
Sbjct: 629 CLDHGTKTQFKDLCEKLLKYIDMLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPR 688
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH--PEIVQLILDPYGNYVIQTAWDV 531
+ LS+ K SNVV+K L ++ IINE+I E+ L+ D +GNYV+QTA D+
Sbjct: 689 FTELSVHKFGSNVVEKVLRTPVVSET--IINELINEGSAEVQALLNDSFGNYVLQTALDI 746
Query: 532 SQGRRIRQTLYDLVVD 547
S R +Y +VD
Sbjct: 747 S--RDTNPYMYKKLVD 760
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 170/319 (53%), Gaps = 19/319 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I + KD+ GCR+LQ+K++E P + +I + + ELM N+L QKL+ +
Sbjct: 260 IFALCKDQHGCRYLQRKLEEE-PYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENCSVA 318
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q T LI + S L+++ + G+R +QK++D Y T EQ ++V AL+
Sbjct: 319 QTTVLIRTAAPS---LVQVALNQHGTRALQKMID---YVT----NDEQIEIIVQALERNV 368
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
V L + +GNHVI++CL + T + +++N + +AT R GCC+LQ C+ A Q
Sbjct: 369 VRLIQDLNGNHVIQKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQ 428
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+ LI + +A L +GNYV QY+LG V+ Q G ALS+ K SSNV
Sbjct: 429 REMLIGVITKHALQLVCDPFGNYVTQYVLG-------EQVIRQFVGHVVALSMQKFSSNV 481
Query: 487 VQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV 546
++K L + E +I EI P + +L+ D YGNYV+QTA D + + R L D +
Sbjct: 482 IEKSLKVASYELRAVLIAEICASPLLPKLLSDCYGNYVVQTALDTAN-QYTRAQLIDRIR 540
Query: 547 DNSPFLQSHMYGKNVLAKV 565
P ++ YG+ + AKV
Sbjct: 541 PVLPMIRQTPYGRRIQAKV 559
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 202/394 (51%), Gaps = 52/394 (13%)
Query: 205 LSDHHHLGSSTNASSRYNNFYARARHH---HHRT--------SYSSIEELRGRIILVAKD 253
++D H GS + YN+ A H H R + + + + G I + KD
Sbjct: 331 VNDGHQHGSGNRRHNNYNHMNAGVNVHRKMHSRRKGDDAAKYANAKLSDFSGDIYSLCKD 390
Query: 254 EQGCRFLQKKVDE-------------RNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+ GCRFLQ+++D N + MI +E+ + ELM N+LIQKL
Sbjct: 391 QHGCRFLQRQLDLGMEAKRSEESGVLSNEVAATMIFNEIYMKIVELMTDPFGNYLIQKLF 450
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++ +Q +LIL V ++ L+RI D G+R +QKL++ + T+E+ L+++
Sbjct: 451 ENVSADQ--RLIL-VKNAAPELIRIALDPHGTRALQKLVECID-------TKEESQLIIN 500
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
+L V LS+ +GNHV+++CLQ+ + + + + +E+C+++AT R GCC+LQ C+
Sbjct: 501 SLSPHIVPLSRDLNGNHVVQKCLQELKAEDNQFIFDAASEHCIEIATHRHGCCVLQRCLD 560
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
Q+ +L V NA LS +GNYVVQY+L + V+ + +LSL
Sbjct: 561 HGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLNHIRANVISLSLH 620
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQGR 535
K SNV++K L + + NE+I + L+ D +GNYV+QT+ DV+
Sbjct: 621 KFGSNVIEKSL------RINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSLDVASAS 674
Query: 536 ---RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ Q+L L+ P +++ +G+ ++ K++
Sbjct: 675 DLAKLAQSLQPLL----PNIKNTPHGRRIMTKIQ 704
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 188/383 (49%), Gaps = 46/383 (12%)
Query: 194 SPSYSNLSHGF-LSDHHHLGSSTNASSRYNNFYARARH----------HHHRTSYSSIEE 242
SP SN +HGF L+ A SR+ AR R + +E+
Sbjct: 751 SPMQSNGNHGFVLTSQPPFAQPFQAYSRFLENPARVGQVRRNGETEAGAFSRFANVPLEQ 810
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
RG + + KD+ GCR+LQ+K++ER P +++MI E + ELM N+L QKL+
Sbjct: 811 YRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEF 870
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
N+EQ T LI + +L+ I + G+R +QK+++ P EQ ++ AL
Sbjct: 871 SNDEQRTALINNAAP---QLVSIALNQHGTRALQKMIEFISTP-------EQTQTVIKAL 920
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
++ V L + +GNHVI++CL +R Q CI A
Sbjct: 921 RDKVVDLVQDLNGNHVIQKCL------------------------NRLSAADAQRCIDHA 956
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+Q+A+LIA + A++Y L + +GNYVVQYIL L P+ T + G+ LS K
Sbjct: 957 SGDQRAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKF 1016
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SSNV++KCL + + +I E++ E+ +++ D + NYV+QTA D + R L
Sbjct: 1017 SSNVIEKCLRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADP-ETRVALI 1075
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ V P ++ +G+ + K+
Sbjct: 1076 EAVRPILPSIRQTPHGRRIAGKI 1098
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 187/357 (52%), Gaps = 32/357 (8%)
Query: 209 HHLGSSTNASSR--------YNNFYARARHHHHRTSY--SSIEELRGRIILVAKDEQGCR 258
+H G+ N R YNN R R+ + Y +++++ G I + KD+ GCR
Sbjct: 440 NHFGTRGNKFGRNGGNHSYFYNN-TVRERNMEGNSRYIDATLDQFIGNIYSLCKDQHGCR 498
Query: 259 FLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS 318
FLQK++D + I E D ELM N+LIQKLI + EQ ++ ++ ++S
Sbjct: 499 FLQKQLDVLGKYAADAIFEETKDHTIELMTDSFGNYLIQKLIERVTTEQ--RIEIAKIAS 556
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
+ + I + G+R +QKL++ T E+ ++++ ALK V LS +GNHV
Sbjct: 557 PE-FVDIALNSHGTRALQKLIECIS-------TAEEANIIIEALKPAVVRLSMDLNGNHV 608
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA 438
+++CL+K P + + + +C+D+AT R GCC+LQ C+ +EQ L ++ N
Sbjct: 609 VQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQTTSLCDQLLTNL 668
Query: 439 YVLSEHSYGNYVVQYILGLKIP----QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLES 494
L+ +GNYVVQYIL + + T +V L + LSL K SNV++K L +
Sbjct: 669 DKLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKFGSNVIEKLLKTN 728
Query: 495 GEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQTAWDVSQGRR--IRQTLYDLVV 546
+S II E+++ +I L+ D YGNYV+QTA D+S + + TL LV
Sbjct: 729 VVSES--IIAELVKEDGKSDIESLLNDSYGNYVLQTALDISHEKNEYLYGTLSALVT 783
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 169/307 (55%), Gaps = 18/307 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +EE G+I + KD+ GCRFLQ+++D I E + ELM N
Sbjct: 398 RYADAKLEEYIGKIYSLCKDQHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGN 457
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EEQ L V SS R + I D G+R +QKL++ + T+
Sbjct: 458 YLIQKLVERVTEEQRITL---VKSSAPRFVSIALDPHGTRALQKLVECID-------TEV 507
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++S+L++ V LS+ +GNHV+++CLQ+ ++ + + + C+ +AT R GCC
Sbjct: 508 ESQTIISSLRDSVVELSRDLNGNHVVQKCLQRLSSAESQFIFDAACKECVKIATHRHGCC 567
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP-----QVTADVVA 468
+LQ C+ +EQ+ +L +++ N +L+ +GNYVVQYIL + + T ++V
Sbjct: 568 VLQRCLDHGNKEQRKQLCDNILDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVN 627
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLES--GEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
L R LSL K SNVV+K L E ++N H I QL+ D +GNYV+Q
Sbjct: 628 ILKPRIIELSLHKFGSNVVEKILRTPIVAEIMIAELLNTGASH-GIEQLLHDGFGNYVLQ 686
Query: 527 TAWDVSQ 533
TA DV++
Sbjct: 687 TALDVAK 693
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 172/332 (51%), Gaps = 43/332 (12%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + ++EE++ I L+ KD+ GCR+LQKK++E N E+I ++V ELM S N
Sbjct: 90 RFASVNLEEMKDEIYLLCKDQNGCRYLQKKLEETNLEQREIIFNQVYPHFVELMTEISLN 149
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+ G+R +Q++++ E
Sbjct: 150 -----------------------------------MHGTRAVQRMIELISL-------DE 167
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +V A I V+L K +GNHVI++CL +F + + + + ++ENC+++AT R GCC
Sbjct: 168 QIQAIVKAFSPIVVTLIKDINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCC 227
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI + Q +L+ +++++A L + YGNYVVQY+L L + + ++ Q G
Sbjct: 228 VLQRCIDYSANHQTKQLVDEIISHALTLVQDPYGNYVVQYVLELGDAKFSDRLIRQFIGN 287
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
LS+ K SSNV++KC+ + E+ +I E++ + +L+ D Y NYV+QTA D +
Sbjct: 288 LSKLSIQKYSSNVMEKCIRVAEEDTRHDLIQEMMNKDRLEKLLKDSYANYVVQTALDYAS 347
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ Q L + + P +++ Y K + K+
Sbjct: 348 ESQ-HQQLAECIRPLLPTIRNTSYCKRIQGKL 378
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 170/322 (52%), Gaps = 32/322 (9%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI-EMILSEVIDDLHELMRHQSANHLIQ 297
S+E+++ R+ ++KD+ GCR LQ+++D + D+ E+I E ++ L E+M N+L Q
Sbjct: 448 SVEDIQNRVFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQ 507
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL------------------ 339
KL+ +NE+Q +I V S+ L+ +L G+R +QK++
Sbjct: 508 KLLERVNEKQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDD 564
Query: 340 --------DAGEYP--TRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
D E P ++ T ++V ALK+ V L +GNHVI+R LQ P+
Sbjct: 565 GDEYGYVNDREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPE 624
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
Y + + + + + C + T R GCC+LQ C+ A + QKA +I V A L + YGNY
Sbjct: 625 YNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNY 684
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
VVQY+L + V+ + G + LS+ K SSNV++KCL ++ E I EI
Sbjct: 685 VVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSC 744
Query: 510 PEIVQLILDPYGNYVIQTAWDV 531
P++ +++ D + NYV+Q A V
Sbjct: 745 PKMNKMLQDQFANYVVQRALCV 766
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 186/334 (55%), Gaps = 13/334 (3%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
+SY ++ + I+ ++KD+ GCRFLQKK+DE + +I EV ELM N+
Sbjct: 194 SSYPTVLDDSTDILALSKDQFGCRFLQKKIDEDFGKNYPLIFKEVHQHSIELMMDPFGNY 253
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQK+I + E++ KLIL+ ++ + IC + G+R QKL+D T
Sbjct: 254 LIQKIILNASAEEL-KLILTNIAP--LIHTICRNQHGTRACQKLIDCLS-------TTGH 303
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
LL + L V+L + +GNHV+++C+ KF D + +++ I N + ++T + GCC+
Sbjct: 304 YRLLQNCLTPHVVNLIQDLNGNHVVQKCIAKFQNDDLQFIIDSICNNIVKISTHKHGCCV 363
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ + +Q +L +++VAN+Y L + +GNYVVQ+++ L IP + +++V +
Sbjct: 364 LQKLLNRCNHQQVLQLGSEIVANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFI 423
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD-VSQ 533
LS K SSNVV+KCL ++ +++ +++ + L+ D +GNYV+QTA D S
Sbjct: 424 NDLSTQKFSSNVVEKCLKIKFDQGFNPLVDALLQPQVLGVLVKDQFGNYVVQTAMDNSSP 483
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
++R L + P ++ +GK + KV G
Sbjct: 484 DNKLRFALA--IKPMLPMVRHASFGKRIHNKVMG 515
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 211/425 (49%), Gaps = 45/425 (10%)
Query: 154 LQSGFEGLNIDGLGLPR---PNNLTVQRNLVAATNRYATTNNASPSYSN-----LSHGFL 205
+ S + + I+G + R P+N TV+R + N N +S Y N L G L
Sbjct: 153 VNSAYYNIGIEGNLMFRREVPDNKTVRRYNTSYCN---AVNLSSGQYQNDANRTLRPGEL 209
Query: 206 SDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVD 265
+ S N S+ NN + E + G I ++AKD+ GCR LQK ++
Sbjct: 210 NTELLCYDSLNVSTLINN---------------TDEHIAGNIAIIAKDQTGCRLLQKMLE 254
Query: 266 ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRI 325
+ + +E IL V+D+L +LM N+L QKLI V + +Q+ +I + L+ I
Sbjct: 255 TEDYLVVETILEGVMDNLVDLMMDPFGNYLCQKLITVCSTQQIDAII---DVAGPMLIDI 311
Query: 326 CDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQK 385
++ G+R +Q+L++ P +Q + + L +L +GNHVI++CL
Sbjct: 312 SLNMHGTRTLQRLIEVLHEP-------KQIAKVTKLLSPSVETLVTDINGNHVIQKCLSV 364
Query: 386 FPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHS 445
PP+ + + + I + L AT R GCC++Q CI A Q+ L+ ++ + L +
Sbjct: 365 LPPEDCEFIHQAILKKSLMFATHRHGCCVIQRCIDAANTRQRDELVETLIEHTLELIQDP 424
Query: 446 YGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINE 505
+GNYVVQYIL LK V A +V +A + + K SSNV++KCL+ + ++ +
Sbjct: 425 FGNYVVQYILKLKNMDVNARIVKAVAPKATLYAKHKFSSNVIEKCLILTHTRIRNILVEK 484
Query: 506 IIRHP--EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPF---LQSHMYGKN 560
++ P + L+L P+GNYVIQ V+Q R L +L+ P L++ GK
Sbjct: 485 FVKAPYDTLKDLMLHPFGNYVIQRVLSVAQ----RSDLDELLKRMRPHIDELRTMSTGKR 540
Query: 561 VLAKV 565
+ AK+
Sbjct: 541 IAAKI 545
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 164/278 (58%), Gaps = 14/278 (5%)
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+L+QKL+ +E+Q + VS + L+ + + G+R +QKL++ +
Sbjct: 6 GNYLVQKLLDRCSEQQRLE-----VSERGELVTVALNTHGTRAVQKLIETLS-------S 53
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+EQ+++ + AL+ VSL K +GNHV++RCLQ+ P+ ++ + + C+++AT R G
Sbjct: 54 REQRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVAQCVEVATHRHG 113
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
CC+LQ CI A QK L+ ++ +A VLS+ ++GNYVVQY+L L + VV+ L
Sbjct: 114 CCVLQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALR 173
Query: 472 GRYFALSLGKCSSNVVQKCLLESG-EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G + +LSL K SSNVV++CL G + + I+ E+I + +L+ D +GNYVIQ+A
Sbjct: 174 GSFSSLSLQKFSSNVVERCLKLGGMDAEREAIVRELIAPTSLSRLLQDGFGNYVIQSALS 233
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
V+ G +I L + + P L+ +GK ++ ++ G
Sbjct: 234 VTSG-QIHNMLVEAIRPYLPTLRGTPHGKRIVQRINGK 270
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 244 RGRIILVAKDEQGCRFLQKKVD-----ERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
RG ++ VA + G R +QK ++ E+ I IE + V+ L++ + NH++Q+
Sbjct: 28 RGELVTVALNTHGTRAVQKLIETLSSREQRAIAIEALRPGVVS----LIKDLNGNHVVQR 83
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
+ L E ++ I +Q + + G V+Q+ +D +Q L QE
Sbjct: 84 CLQRLGPED-SQFIYDAAVAQ--CVEVATHRHGCCVLQRCIDFATPAQKQALVQE----- 135
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ N + LS+ GN+V++ L+ + ++ + + L+ + +++ C
Sbjct: 136 ---IANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALRGSFSSLSLQKFSSNVVERC 192
Query: 419 IPL-AQEEQKARLIADVVANAYV--LSEHSYGNYVVQYILGLKIPQV 462
+ L + ++ ++ +++A + L + +GNYV+Q L + Q+
Sbjct: 193 LKLGGMDAEREAIVRELIAPTSLSRLLQDGFGNYVIQSALSVTSGQI 239
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 169/319 (52%), Gaps = 29/319 (9%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI-EMILSEVIDDLHELMRHQSANHLIQ 297
S+++++ R+ ++KD+ GCR LQ+++D + D+ ++I E ++ L E+M N+L Q
Sbjct: 459 SVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQ 518
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT----------- 346
KL+ + E+Q +I V S+ L+ +L G+R +QK+++ +
Sbjct: 519 KLLERVKEKQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEE 575
Query: 347 --------------RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
+ + T L+V ALK+ V L +GNHVI+R LQ P+Y +
Sbjct: 576 EGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ 635
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
+ + + + C + T R GCC+LQ C+ A + QKA +IA V A L + YGNYVVQ
Sbjct: 636 FVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQ 695
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
Y+L + V+ + G + LS+ K SSNV++KCL ++ E I EI P++
Sbjct: 696 YVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKM 755
Query: 513 VQLILDPYGNYVIQTAWDV 531
+++ D + NYV+Q A V
Sbjct: 756 NKMLQDQFANYVVQRALCV 774
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
LSV Q R+ + D +G R++Q+ LD Y R L + L + V
Sbjct: 458 LSVDDIQNRVFAMSKDQNGCRLLQEQLD---YEDRGDLCDVIYQESLEHLAEMMVD---- 510
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAEN----CLDLATDRSGCCLLQYCI--------- 419
P GN++ ++ L++ ++ ++ N L+L RS +++ C
Sbjct: 511 PFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEED 570
Query: 420 ---------------PLAQEEQKARLIADVVA-----NAYVLSEHSYGNYVVQYILGLKI 459
P + ++ + D++ +A L S GN+V+Q L
Sbjct: 571 FDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMK 630
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDP 519
P+ V + + + V+Q+CL + + Q +I ++ R + ++L+ DP
Sbjct: 631 PEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVER--QAMKLMQDP 688
Query: 520 YGNYVIQTAWD 530
YGNYV+Q D
Sbjct: 689 YGNYVVQYVLD 699
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 29/184 (15%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
V GC LQ+ +D N ++++V +LM+ N+++Q ++ E+
Sbjct: 648 VGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAF 707
Query: 310 KLI---------LSVVSSQQRLLRICDDLSGSRVMQK-LLDAGEYPTRQQLTQEQQS--- 356
+I LSV ++ C + + RV QK + + P ++ Q+Q +
Sbjct: 708 GVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYV 767
Query: 357 --------------LLVSALKNITVSLSKSPHGNHVIKRCLQKFPP-DYTKDL-LEEIAE 400
LLV A++ ++ + G + R L++FP D + D+ L A+
Sbjct: 768 VQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDMGLSPTAD 827
Query: 401 NCLD 404
N D
Sbjct: 828 NLFD 831
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 565 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 624
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 625 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 674
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 675 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 734
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 735 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 794
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 795 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 852
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S RR+ + + L+V
Sbjct: 853 TALDISHKQNDYLYRRLSEIVAPLLV 878
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 563 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 622
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 623 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 672
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 673 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 732
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 733 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 792
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 793 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 850
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S RR+ + + L+V
Sbjct: 851 TALDISHKQNDYLYRRLSEIVAPLLV 876
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 561 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 620
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 621 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 670
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 671 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 730
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 731 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 790
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 791 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 848
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S RR+ + + L+V
Sbjct: 849 TALDISHKQNDYLYRRLSEIVAPLLV 874
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 559 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 618
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 619 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 668
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 669 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 728
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 729 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 788
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 789 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 846
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S RR+ + + L+V
Sbjct: 847 TALDISHKQNDYLYRRLSEIVAPLLV 872
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 201/382 (52%), Gaps = 30/382 (7%)
Query: 168 LPRPNNLTVQRNLVAATN-RYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYA 226
+P P+++ + V N AT NNA+ ++ H+G+ N +R N +Y
Sbjct: 493 VPHPHSVPQKPPHVVGLNPGMATNNNANHQGRRHANNRGGRSAHMGNGKNRHNR-NYYYG 551
Query: 227 RARHHHH---------RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILS 277
+ +H + R + +++++ G I + KD+ GCRFLQ ++D P + I
Sbjct: 552 NSNYHENHQRKLEENSRYANATLDQFIGNIYSLCKDQHGCRFLQMQLDVLGPEAADAIYD 611
Query: 278 EVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQK 337
E D ELM N+LIQKL+ + +Q ++ L+ +++ +RI + G+R +QK
Sbjct: 612 ETRDYTVELMTDSFGNYLIQKLLEKVTVDQ--RIFLARIAAPH-FVRIASNPHGTRALQK 668
Query: 338 LLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
L++ T+E+ +++++LK V LSK +GNH++++CLQK P + + +
Sbjct: 669 LVECVS-------TEEEAQIVINSLKGSIVELSKDLNGNHIVQKCLQKLQPKDVQFIFDA 721
Query: 398 IAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL 457
++C ++AT R GCC+LQ C+ + Q L ++ + L+ +GNYVVQYI+
Sbjct: 722 ACQHCTEIATHRHGCCVLQRCLDHGSKAQCQALCNILLKHVDHLTLDPFGNYVVQYIITK 781
Query: 458 KIPQVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---P 510
++ Q + D VV L + LSL K SNV++K + S +I EI+ +
Sbjct: 782 EVEQDSYDYTYKVVHLLKPKVVELSLHKFGSNVIEKIIRT--RVVSETMIMEILNNRGDT 839
Query: 511 EIVQLILDPYGNYVIQTAWDVS 532
++ L+ D YGNYV+QTA DVS
Sbjct: 840 DVPALLNDGYGNYVLQTALDVS 861
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 175/329 (53%), Gaps = 13/329 (3%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ D+ GCR+LQ+++++ NP + I +++ + LM N+L QKLI V+N EQ
Sbjct: 158 MCHDQYGCRYLQRQLEDNNPQTTKYIFEQMLPIITPLMSDPFGNYLCQKLIEVVNSEQRI 217
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
++I + + I ++ G+R +QKL+ T+E+Q++L++ + + L
Sbjct: 218 QIIRKITPT---FFIISKNIHGTRSIQKLISCYS-------TKEEQNMLINVISPYVIEL 267
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI+ CL+ F + + I +N + +AT + GCC++Q CI +Q
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNGFIFDTIVNDDNLVKVATHKHGCCVVQRCIDYGNRQQL 327
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
LI ++V N+ +L + ++GNYVVQYIL + I V DV L LS+ K SSNV+
Sbjct: 328 ITLIDEIVKNSLILVKDAFGNYVVQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSSNVI 387
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+K + E I ++ ++ ++ +L+ D Y NYVIQT D S L + +
Sbjct: 388 EKLIRSDEIEVRQMIFDKFLQIKDVTKLLQDSYANYVIQTCLDQS-SVEYHSKLSNWITP 446
Query: 548 NSPFLQSHMYGKNVLAKVRGNKNRFHNRV 576
+ +++ Y K + K+R ++N+ H V
Sbjct: 447 HLSTIRNTPYYKKIQNKLRRDENKQHYSV 475
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ VA + GC +Q+ +D N + ++ E++ + L++ N+++Q ++ V
Sbjct: 302 LVKVATHKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLILVKDAFGNYVVQYILNV---- 357
Query: 307 QMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
++ ++ + LL DLS S V++KL+ + E RQ + + +
Sbjct: 358 ---DIVGVIIDVTKMLLNDLIDLSMQKFSSNVIEKLIRSDEIEVRQMIFDK-----FLQI 409
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDY 390
K++T L S + N+VI+ CL + +Y
Sbjct: 410 KDVTKLLQDS-YANYVIQTCLDQSSVEY 436
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 186/346 (53%), Gaps = 35/346 (10%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDE---------------RNPIDIEMILSEVIDDLH 284
+ + G I + KD+ GCRFLQ+++D N I MI +E+ +
Sbjct: 462 LSDFTGEIFSLCKDQHGCRFLQRQLDLGREVAEGRNTDSSVLSNDIAATMIFNEIYLKIV 521
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
ELM N+LIQKL ++ +Q ++IL V ++ +RI D G+R +QKL++
Sbjct: 522 ELMTDPFGNYLIQKLFENVSVDQ--RIIL-VKNAAPEFIRIALDPHGTRALQKLVECIS- 577
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
T+E+ L++ +L VSLS+ +GNHV+++CLQK P+ + + E + +C +
Sbjct: 578 ------TEEESKLIIGSLSPHIVSLSRDLNGNHVVQKCLQKLKPEENQFIFETASLHCNE 631
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
+AT R GCC+LQ C+ +Q+ +L V NA LS +GNYVVQY+L
Sbjct: 632 IATHRHGCCVLQRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSIQ 691
Query: 465 DVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-IVQLILDPYGNY 523
++ + +LSL K SNV++K L + + + +I+ +++H + ++ D +GNY
Sbjct: 692 IIMDHIKSNIISLSLHKFGSNVIEKSLRIN--KLTNTLIDVLLKHQDRFSDMLNDAFGNY 749
Query: 524 VIQTAWDVSQGR---RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
V+QT+ DV+ + + Q L L+ P +++ +G+ ++ K++
Sbjct: 750 VLQTSLDVANPQDLNSLSQALQPLL----PNIKNTPHGRRIMTKIQ 791
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 204/396 (51%), Gaps = 54/396 (13%)
Query: 208 HHHLGSSTNASSRYNNFYARARHHH-HRTSY-------------SSIEELRGRIILVAKD 253
+H +G +TN ++ F++ + + HR S+ + +E+ G I+ + KD
Sbjct: 444 YHGMGINTNRNNHGRRFHSSSESANIHRKSHNKRKGDDAMKYANAKLEDFTGEILSLCKD 503
Query: 254 EQGCRFLQKKVD------ER------------NPIDIEMILSEVIDDLHELMRHQSANHL 295
+ GCRFLQ+++D E+ N + MI +E+ + ELM N+L
Sbjct: 504 QHGCRFLQRQLDMGREVSEKPTGELSKANILPNDVAASMIFNEIYLKIVELMTDPFGNYL 563
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQKL ++ +Q ++IL V +S ++I D G+R +QKL++ T+E+
Sbjct: 564 IQKLFENVSTDQ--RIIL-VKNSSPEFIKIALDTHGTRALQKLVEC-------ITTEEEG 613
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+++ +L VSLS+ +GNHV+++CLQK P + + + + C ++AT R GCC+L
Sbjct: 614 RIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIFDTASMYCNEIATHRHGCCVL 673
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q C+ EQ+ +L +V NA LS +GNYVVQY+L + ++ +
Sbjct: 674 QRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLSRGDEHSISLIMDHIKNNII 733
Query: 476 ALSLGKCSSNVVQKCLL--ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
LSL K SNV++K L + +E ++ R PE++ D +GNYV+QT+ DV+
Sbjct: 734 TLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLN---DAFGNYVLQTSLDVAN 790
Query: 534 GRR---IRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ Q L L+ P ++S +G+ ++ K++
Sbjct: 791 FNDMHLLSQALAPLL----PPIKSTPHGRRIMMKIQ 822
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 174/322 (54%), Gaps = 21/322 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E + ELM N
Sbjct: 558 RFADAVLDQYIGNIHSLCKDQHGCRFLQKQLDVLGSKAADAIFEETKEYTVELMTDSFGN 617
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 618 YLIQKLLEAVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TYE 667
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I +NC+D+AT R GCC
Sbjct: 668 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCC 727
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL----KIPQVTADVVAQ 469
+LQ C+ EQ L ++ L+ +GNYVVQYI+ K T +V
Sbjct: 728 VLQRCLDHGTREQCETLCNKLLTLVDKLTLDPFGNYVVQYIITKESERKKYDYTHKIVHL 787
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 788 LKPRAIELSIHKFGSNVIEKIL--KTPIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 845
Query: 527 TAWDVS--QGRRIRQTLYDLVV 546
TA D+S Q + + L D+V
Sbjct: 846 TALDISHKQNDYLYKRLSDIVA 867
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 555 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 614
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 615 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 664
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 665 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 724
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 725 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 784
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 785 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 842
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S +R+ + + L+V
Sbjct: 843 TALDISHKQNDYLYKRLSEIVAPLLV 868
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 556 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 615
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 616 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 665
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 666 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 725
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 726 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 785
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 786 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 843
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S +R+ + + L+V
Sbjct: 844 TALDISHKQNDYLYKRLSEIVAPLLV 869
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 179/326 (54%), Gaps = 25/326 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 555 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGN 614
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 615 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 664
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 665 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 724
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 725 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 784
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L + S +I EI+ + I L+ D YGNYV+Q
Sbjct: 785 LKPRAIELSIHKFGSNVIEKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 842
Query: 527 TAWDVSQG------RRIRQTLYDLVV 546
TA D+S +R+ + + L+V
Sbjct: 843 TALDISHKQNDYLYKRLSEIVAPLLV 868
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 175/329 (53%), Gaps = 13/329 (3%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ D+ GCR+LQ+++++ NP + I +++ + LM N+L QKLI V+N EQ
Sbjct: 158 MCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRI 217
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
++I + + I ++ G+R +QKL+ T+E+Q++L++ + + L
Sbjct: 218 QIITKITPT---FFIISKNIHGTRSIQKLISCYS-------TKEEQNMLINVISPYVIEL 267
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI+ CL+ F + + + I N + +AT + GCC++Q CI +Q
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNRFIFDAIVSDGNLVKVATHKHGCCVVQRCIDYGNRQQL 327
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
LI ++V N+ VL + ++GNYVVQYIL + I V DV L LS+ K SSNV+
Sbjct: 328 ITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVI 387
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+K + E I + ++ ++ +L+ D Y NYVIQT D S L + ++
Sbjct: 388 EKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQS-SVEYHSKLSNWIIP 446
Query: 548 NSPFLQSHMYGKNVLAKVRGNKNRFHNRV 576
+ +++ Y K + K+ ++N+ H+ V
Sbjct: 447 HLSAIRNTPYYKKIQNKLLRDENKQHHSV 475
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ-----KL 299
G ++ VA + GC +Q+ +D N + ++ E++ + L++ N+++Q +
Sbjct: 300 GNLVKVATHKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDI 359
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+GV+N+ +TK++L L+ + S V++KL+ + E RQ +
Sbjct: 360 VGVIND--VTKMLLD------DLIDLSMQKFSSNVIEKLVRSDEIEARQMIFDR-----F 406
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+K++T L S + N+VI+ CL + +Y L
Sbjct: 407 LQIKDVTKLLQDS-YANYVIQTCLDQSSVEYHSKL 440
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 201/396 (50%), Gaps = 54/396 (13%)
Query: 208 HHHLGSSTNASSRYNNFYARARHHH-HRTSY-------------SSIEELRGRIILVAKD 253
+H +G +TN ++ F++ + + HR S+ + +E+ G I+ + KD
Sbjct: 445 YHGMGINTNRNNHGRRFHSSSESANVHRKSHNKRKGDDAMKYANAKLEDFTGEILSLCKD 504
Query: 254 EQGCRFLQKKVD-----ERNP-------------IDIEMILSEVIDDLHELMRHQSANHL 295
+ GCRFLQ+++D NP + MI +E+ + ELM N+L
Sbjct: 505 QHGCRFLQRQLDLGRELSENPTGELSKANILPNDVAASMIFNEIYLKIVELMTDPFGNYL 564
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQKL ++ +Q ++IL V +S ++I D G+R +QKL++ T+E+
Sbjct: 565 IQKLFENVSTDQ--RIIL-VKNSSPEFIKIALDTHGTRALQKLVEC-------ITTEEEG 614
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+++ +L VSLS+ +GNHV+++CLQK P + + + + C ++AT R GCC+L
Sbjct: 615 RIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIFDTASMYCNEIATHRHGCCVL 674
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q C+ EQ+ +L V NA LS +GNYVVQY+L ++ +
Sbjct: 675 QRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVLSRGDEHSIGLIMDHIKNNII 734
Query: 476 ALSLGKCSSNVVQKCLL--ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
LSL K SNV++K L + +E ++ R PE++ D +GNYV+QT+ DV+
Sbjct: 735 TLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLN---DAFGNYVLQTSLDVAS 791
Query: 534 GRR---IRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ Q L L+ P ++S +G+ ++ K++
Sbjct: 792 FNDMHLLSQALAPLL----PPIKSTPHGRRIMMKIQ 823
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 183/344 (53%), Gaps = 23/344 (6%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLIQ 297
+ + LRGR+ AKD+ GCR+LQ+ +D + +++++ E+I + ELM Q AN LIQ
Sbjct: 194 TADSLRGRVYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQ 253
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++ ++ K+ V + + I G+ +QK+++ T+E+ +
Sbjct: 254 KLFDIMPDDVRYKV---AVVAAPHICMISLTPHGTFSVQKMIETIS-------TREEMKI 303
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ AL V L K HGNHVI++ LQ+F D + + +A +C+ +A ++ GCC+LQ
Sbjct: 304 ICEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQR 363
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ A QKA L+ V+A +++ +GNYV+QY+L ++ + L
Sbjct: 364 CLEHASPRQKAALVDQVLACCLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQL 423
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDVSQGRR 536
S+ K SSNV++K L + + E+ +PEI+ LI D YGNYV+QTA ++ +
Sbjct: 424 SMNKFSSNVMEKVLRGASRPVQVMYMEEMC-NPEIISHLIQDDYGNYVLQTALTINAPVQ 482
Query: 537 IRQTLYDL-----VVDNSPFLQSHMYGK--NVLAKVRGNKNRFH 573
Q + + ++ N+P+ + M GK V K+ GN FH
Sbjct: 483 AEQLVNAIRPFMPLIKNAPYAKK-MEGKMEAVARKIEGNN--FH 523
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 194/351 (55%), Gaps = 38/351 (10%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVD-----ERNP-IDIE------------MILSEV 279
+ +E+ G+I + KD+ GCRFLQ+++D NP D+E MI +E+
Sbjct: 471 AKLEDFTGQIYSLCKDQHGCRFLQRQLDLGREAASNPNADLENTQILTNDIAATMIFNEI 530
Query: 280 IDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL 339
+ ELM N+LIQKL ++ +Q ++IL V ++ +RI D G+R +QKL+
Sbjct: 531 YLKIIELMTDPFGNYLIQKLFENVSADQ--RIIL-VKNASPEFIRIALDPHGTRALQKLI 587
Query: 340 DAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA 399
+ T+E+ L++++L V+LS+ +GNHV+++CLQ+ P+ + + E +
Sbjct: 588 EC-------ITTEEESRLIINSLSPRIVALSRDLNGNHVVQKCLQRLKPEENQFIFETAS 640
Query: 400 ENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+C ++AT R GCC+LQ C+ Q+ +L V NA LS +GNYVVQY+L
Sbjct: 641 LHCNEIATHRHGCCVLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLSRGD 700
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-IVQLILD 518
+ ++ + +LSL K SNV++K L + + + +I+ ++ + E +++ D
Sbjct: 701 DESIRIILDHIKANVVSLSLHKFGSNVIEKSLRIN--KLTDSLIDVLLLNKERFSEMLND 758
Query: 519 PYGNYVIQTAWDVSQGR---RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+GNYV+QT+ DV+ R ++ Q L L+ P +++ +G+ ++ K++
Sbjct: 759 AFGNYVLQTSLDVANVRDLGKLSQALQPLL----PNIKNTPHGRRIMIKIQ 805
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 199/394 (50%), Gaps = 50/394 (12%)
Query: 209 HHLGSSTNASSRYNNFYARARHHHHRTSY-----------------------SSIEELRG 245
HH G + N+ R+ F R ++R + + + + G
Sbjct: 339 HHSGYTRNSGERHQGFNGRFNSGNNRRNMYEGMNVHRKMSRRRGDDAAKYANAKLSDFSG 398
Query: 246 RIILVAKDEQGCRFLQKKVD-----------ERNPIDIEMILSEVIDDLHELMRHQSANH 294
I + KD+ GCRFLQ+++D E++ + MI +E+ + +LM N+
Sbjct: 399 EIYNLCKDQHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNY 458
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQKL ++ +Q ++IL V ++ +RI D G+R +QKL++ T+E+
Sbjct: 459 LIQKLFEHVSTDQ--RVIL-VKNAAPEFMRIALDSHGTRALQKLVECIS-------TEEE 508
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
LL+ +L V+LS+ +GNHV+++CLQ+ + + + A +C ++AT R GCC+
Sbjct: 509 SQLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCCV 568
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ C+ Q+A+L V NA LS +GNYVVQY+L + V++ +
Sbjct: 569 LQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNI 628
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEII--RHPEIVQLILDPYGNYVIQTAWDVS 532
LSL K SNV++K L S T + E++ ++ D YGNYV+QT+ DV+
Sbjct: 629 VTLSLHKFGSNVIEKSLRIS---TLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDVA 685
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+R+ L D++ P +++ +G+ +++K++
Sbjct: 686 SVGDLRK-LSDVLQPLLPSIKNTPHGRRIMSKIQ 718
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 199/394 (50%), Gaps = 50/394 (12%)
Query: 209 HHLGSSTNASSRYNNFYARARHHHHRTSY-----------------------SSIEELRG 245
HH G + N+ R+ F R ++R + + + + G
Sbjct: 339 HHSGYTRNSGERHQGFNGRFNSGNNRRNMYEGMNVHRKMSRRRGDDAAKYANAKLSDFSG 398
Query: 246 RIILVAKDEQGCRFLQKKVD-----------ERNPIDIEMILSEVIDDLHELMRHQSANH 294
I + KD+ GCRFLQ+++D E++ + MI +E+ + +LM N+
Sbjct: 399 EIYNLCKDQHGCRFLQRQLDLGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNY 458
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQKL ++ +Q ++IL V ++ +RI D G+R +QKL++ T+E+
Sbjct: 459 LIQKLFEHVSTDQ--RVIL-VKNAAPEFMRIALDSHGTRALQKLVECIS-------TEEE 508
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
LL+ +L V+LS+ +GNHV+++CLQ+ + + + A +C ++AT R GCC+
Sbjct: 509 SQLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCCV 568
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
LQ C+ Q+A+L V NA LS +GNYVVQY+L + V++ +
Sbjct: 569 LQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNI 628
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEII--RHPEIVQLILDPYGNYVIQTAWDVS 532
LSL K SNV++K L S T + E++ ++ D YGNYV+QT+ DV+
Sbjct: 629 VTLSLHKFGSNVIEKSLRIS---TLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDVA 685
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+R+ L D++ P +++ +G+ +++K++
Sbjct: 686 SVGDLRK-LSDVLQPLLPSIKNTPHGRRIMSKIQ 718
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 182/344 (52%), Gaps = 23/344 (6%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLIQ 297
+ + LRGR+ AKD+ GCR+LQ+ +D + +++++ E+I + ELM Q AN LIQ
Sbjct: 194 TADSLRGRVYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQ 253
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++ ++ K+ V + + I G+ +QK+++ T+E+ +
Sbjct: 254 KLFDIMPDDARYKV---AVVAAPHICMISLTPHGTFSVQKMIETIS-------TREEMKI 303
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ AL V L K HGNHVI++ LQ+F D + + +A +C+ +A ++ GCC+LQ
Sbjct: 304 ICEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQR 363
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ A QKA L+ V+A + + +GNYV+QY+L ++ + L
Sbjct: 364 CLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQL 423
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDVSQGRR 536
S+ K SSNV++K L + + E+ +PEI+ LI D YGNYV+QTA ++ +
Sbjct: 424 SMNKFSSNVMEKVLRGASRPVQVMYMEEMC-NPEIISHLIQDDYGNYVLQTALTINAPVQ 482
Query: 537 IRQTLYDL-----VVDNSPFLQSHMYGK--NVLAKVRGNKNRFH 573
Q + + ++ N+P+ + M GK V K+ GN FH
Sbjct: 483 AEQLVNAIRPFMPLIKNAPYAKK-MEGKMEAVARKIEGNN--FH 523
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 176/306 (57%), Gaps = 17/306 (5%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G I +AKD+ CR+LQ K+ E +++I +I+ + +LM N+L Q+++ V +
Sbjct: 359 GSIYHMAKDQNWCRYLQDKLLE-GKHHVDVIFEGIINHIADLMISSFGNYLAQEIVEVCD 417
Query: 305 EEQMTKLILSVVS-SQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
E QM ++IL + ++L+ + + G+RV+QKL++ + ++EQ L++SAL+
Sbjct: 418 EGQMLRIILVLTQYPLKQLIAVSLNTHGTRVVQKLIE-------KVSSREQIMLIISALQ 470
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
+ L +G+HVI+RCL F + K + E A NCL++A GC +LQ CI A+
Sbjct: 471 PSFMLLVNDHNGHHVIQRCLVNFGVEDNKFIFEGAAANCLNMAVHCHGCFVLQSCIK-AR 529
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
A LI ++ + + L++ +GNYVVQ +L +IP A + + G+Y LS + S
Sbjct: 530 GRYLANLIMEICLHGFELAQDPFGNYVVQCVLEQEIPSANAHLASLFEGKYVYLSKQQGS 589
Query: 484 SNVVQKCLLESGEEQSTGIINEI--IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
SNVV+KCL+ ++ II E+ + + QL+ D + NYV +TA D ++GR L
Sbjct: 590 SNVVEKCLMFFPDDAKAVIIQELLMLSGSDFEQLLQDRFANYVFRTALDHTRGR-----L 644
Query: 542 YDLVVD 547
YD++V+
Sbjct: 645 YDVLVE 650
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 174/329 (52%), Gaps = 13/329 (3%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ D+ GCR+LQ+++++ NP + I +++ + LM N+L QKLI V+N EQ
Sbjct: 158 MCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRI 217
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
++I + + I ++ G+R +QKL+ T+E+Q++L++ + + L
Sbjct: 218 QIITKITPT---FFIISKNIHGTRSIQKLISCYS-------TKEEQNMLINVISPYVIEL 267
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI+ CL+ F + + I N + +AT + GCC++Q CI +Q
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCIDYGNRQQL 327
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
LI ++V N+ VL + ++GNYVVQYIL + I V DV L LS+ K SSNV+
Sbjct: 328 ITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVI 387
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+K + E I + ++ ++ +L+ D Y NYVIQT D S L + ++
Sbjct: 388 EKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQS-SVEYHSKLSNWIIP 446
Query: 548 NSPFLQSHMYGKNVLAKVRGNKNRFHNRV 576
+ +++ Y K + K+ ++N+ H+ V
Sbjct: 447 HLSAIRNTPYYKKIQNKLLRDENKQHHSV 475
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ-----KL 299
G ++ VA + GC +Q+ +D N + ++ E++ + L++ N+++Q +
Sbjct: 300 GNLVKVATHKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDI 359
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+GV+N+ +TK++L L+ + S V++KL+ + E RQ +
Sbjct: 360 VGVIND--VTKMLLD------DLIDLSMQKFSSNVIEKLVRSDEIEARQMIFDR-----F 406
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+K++T L S + N+VI+ CL + +Y L
Sbjct: 407 LQIKDVTKLLQDS-YANYVIQTCLDQSSVEYHSKL 440
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 167/306 (54%), Gaps = 19/306 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 565 RFADAVLDQYIGNIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 624
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ T E
Sbjct: 625 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIEC-------ITTDE 674
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I +NC+D+AT R GCC
Sbjct: 675 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCC 734
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++ L+ +GNYVVQYI+ + + T +V
Sbjct: 735 VLQRCLDHGSREQCETLCDKLLTLVDKLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHL 794
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L + LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 795 LKPKVIELSIHKFGSNVIEKIL--KTPIVSEPMILEILNNGGEAGIQSLLNDSYGNYVLQ 852
Query: 527 TAWDVS 532
TA D+S
Sbjct: 853 TALDIS 858
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ +L++ N L D+ GC LQ + + + + + L S+GNY
Sbjct: 566 FADAVLDQYIGNIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNY 625
Query: 450 VVQYILGLKIPQVTAD---VVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINE 505
++Q +L +VT + V+ +++ +F +SL + +QK + ++ I+ +
Sbjct: 626 LIQKLLE----EVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECITTDEEAQIVVD 681
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+R P VQL D GN+VIQ + Q ++D + DN + +H +G VL +
Sbjct: 682 SLR-PYTVQLSKDLNGNHVIQKCLQRLKPENF-QFIFDAICDNCIDIATHRHGCCVLQRC 739
Query: 566 RGNKNR 571
+ +R
Sbjct: 740 LDHGSR 745
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 188/344 (54%), Gaps = 23/344 (6%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDER-NPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ + LRGR+ AKD+ GCR+LQ+ +D +P ++++++E+I + ELM Q AN LIQ
Sbjct: 194 TADSLRGRVYETAKDQHGCRYLQRWLDTNCDPEALQVMMNEIIPHVGELMTDQYANFLIQ 253
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++ ++ + +++V++ Q + I G+ +QK+++ T+E+ +
Sbjct: 254 KLFDIMPDD--VRYKVAIVAAPQ-ICMISLTPHGTFSVQKMIETIS-------TREEMEI 303
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ AL V L K HGNHVI++ LQ+F D + + +A +C+ +A ++ GCC+LQ
Sbjct: 304 ISEALCKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQR 363
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ A QKA L+ V+A + + +GNYV+QY+L ++ + L
Sbjct: 364 CLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQL 423
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDVSQGRR 536
S+ K SSNV++K L + + E+ +PEI+ LI D YGNYV+QTA ++ +
Sbjct: 424 SMNKFSSNVMEKVLRGASGPVQVMYMEEMC-NPEIISHLIQDDYGNYVLQTALTINAPVQ 482
Query: 537 IRQTL-----YDLVVDNSPFLQSHMYGK--NVLAKVRGNKNRFH 573
Q + + ++ N+P+ + M GK NV KV N FH
Sbjct: 483 AAQLVNVIRPFMPLIRNAPYAKK-MEGKMENVARKVEC--NHFH 523
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 169/304 (55%), Gaps = 17/304 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +++++ G I + KD+ GCRFLQK++D + I E ELM N
Sbjct: 479 RYADATLDQFAGNIYSLCKDQHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGN 538
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKLI ++ EQ T+L + ++S Q + I D G+R +QKL++ + T +
Sbjct: 539 YLIQKLIERVSTEQRTEL--AKIASPQ-FVEIALDPHGTRALQKLIECID-------TDD 588
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V++L V LSK +GNHV+++CLQK P + + + +N +D+AT R GCC
Sbjct: 589 EAKIIVASLSGSIVQLSKDLNGNHVVQKCLQKLHPKDFQFIFDATCQNSVDIATHRHGCC 648
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C +EQ L +++ + L+ +GNYVVQYI+ + + T +V
Sbjct: 649 VLQRCFDHGTKEQCETLCDELLKHVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHL 708
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-PEIVQLILDPYGNYVIQTA 528
L + LS+ K SNV++K L ++ +I E++ H +I L+ D YGNYV+QTA
Sbjct: 709 LKPKIAELSVHKFGSNVIEKLLRTPVATEN--MILELLNHKADIPNLLNDSYGNYVLQTA 766
Query: 529 WDVS 532
D+S
Sbjct: 767 LDIS 770
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 193/369 (52%), Gaps = 29/369 (7%)
Query: 212 GSSTNASSRYNNFYARAR-HHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI 270
G NA + Y R++ R +++EE G I + KD+ GCRFLQK++D
Sbjct: 473 GKPRNADTNYYGQDHRSKLEDGSRYVDATLEEYIGSIYTLCKDQHGCRFLQKQLDIMGKE 532
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
++I E + ELM N+L+QKLI + EQ T+L S+++S + I +
Sbjct: 533 AADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIEQRTEL--SMIASPH-FVSIAKNPH 589
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKF-PPD 389
G+R +QKL++ P E+ +++S LK+ V LSK +GNHVI++CL++ PPD
Sbjct: 590 GTRALQKLIECVSSP-------EEAQIIISTLKDCVVVLSKDLNGNHVIQKCLERLQPPD 642
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ + + + + C +AT R GCC+LQ C+ + Q L +++N L+ +GNY
Sbjct: 643 F-QFIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQSLCNVLLSNIDKLTLDPFGNY 701
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFA----LSLGKCSSNVVQKCLLESGEEQSTGIINE 505
VVQYI+ + + D ++A A LS+ K SNV++K L ++ +I E
Sbjct: 702 VVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSNVIEKLLRTPVVCEA--LIQE 759
Query: 506 IIRH---PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD-LVVDNSPFL----QSHMY 557
++ EI L+ D YGNYV+QT DVS R + +YD L SP L ++ +
Sbjct: 760 LLNDDSGKEIELLLNDSYGNYVLQTTLDVSHKR--NKYMYDRLNAIISPLLVGPIKNTPH 817
Query: 558 GKNVLAKVR 566
GK + +R
Sbjct: 818 GKRIAGMLR 826
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 169/306 (55%), Gaps = 19/306 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +++++ G I + KD+ GCRFLQK++D + I E + ELM N
Sbjct: 491 RYADATLDQFIGNIHSLCKDQHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGN 550
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ ++ L+ +++ + I + G+R +QKL++ ++E
Sbjct: 551 YLIQKLLERVTVEQ--RITLAKIAAPH-FVYIASNPHGTRALQKLVEC-------IGSKE 600
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++++ +LK V LSK +GNH++++CLQK P+ + + + +E+C ++AT R GCC
Sbjct: 601 EANIIIGSLKGSVVELSKDLNGNHIVQKCLQKLQPNDVQFIFDAASEHCTEIATHRHGCC 660
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ E Q+ RL +++N L+ +GNYVVQYI+ + T +V
Sbjct: 661 VLQRCLDHGDEVQRQRLCDKLLSNIDHLTLDPFGNYVVQYIITKESESGNNYFTLKIVQA 720
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLILDPYGNYVIQ 526
L + LSL K SNV++K L S +I E++ +I L+ D YGNYV+Q
Sbjct: 721 LKSKVTELSLHKFGSNVIEKILRTPA--VSDDLITELLSSRAEADIQALLNDGYGNYVLQ 778
Query: 527 TAWDVS 532
T DV+
Sbjct: 779 TMLDVT 784
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 166/284 (58%), Gaps = 24/284 (8%)
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
N+L+QKL+ +E+Q + VS +R L+ + + G+R +QKL++
Sbjct: 6 GNYLVQKLLDRCSEQQRLE-----VSGDRRGELVSVALNTHGTRAVQKLIETLS------ 54
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
++EQ+++ + AL+ VSL K +GNHV++RCLQ+ P+ ++ + + C+++AT R
Sbjct: 55 -SREQRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVACCVEVATHR 113
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GCC+LQ CI A QK L+ +V +A VLS+ ++GNYVVQY+L L A VV
Sbjct: 114 HGCCVLQRCIDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVA 173
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESG-EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTA 528
L G + +LSL K SSNVV++CL G + + I+ E+I+ + +L+ D YGNYVIQ+A
Sbjct: 174 LRGSFCSLSLQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLLQDGYGNYVIQSA 233
Query: 529 WDVSQGRRIRQTLYDLVVDNS----PFLQSHMYGKNVLAKVRGN 568
V+ G T + L+V+ P L+ +GK ++ ++ G
Sbjct: 234 LSVTSG-----TTHGLLVEAIKPYLPTLRGTPHGKRIVQRINGK 272
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 446 YGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL--LESGEEQSTGII 503
+GNY+VQ +L Q +V G +++L + VQK + L S E+++ I
Sbjct: 5 FGNYLVQKLLDRCSEQQRLEVSGDRRGELVSVALNTHGTRAVQKLIETLSSREQRAIAI- 63
Query: 504 NEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
E +R P +V LI D GN+V+Q G Q +YD V + +H +G VL
Sbjct: 64 -EALR-PGVVSLIKDLNGNHVVQRCLQ-RLGPEDSQFIYDAAVACCVEVATHRHGCCVLQ 120
Query: 564 K 564
+
Sbjct: 121 R 121
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 21/318 (6%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+++++ G I + KD+ GCRFLQK++D I E+ + ELM N+LIQ
Sbjct: 466 ATLDQFIGSIYSLCKDQHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQ 525
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ + EQ +LI+ +S+ + I + G+R +QKL++ + T E+ +
Sbjct: 526 KLLERITLEQ--RLIIINISAP-YFIDIALNPHGTRALQKLVECIK-------TDEEAKI 575
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V +LK V LSK +GNHV+++ LQ+F P++ + + E +NC+++AT R GCC+LQ
Sbjct: 576 IVDSLKPSIVELSKDLNGNHVVQKILQQFKPEFIQFIFEAACQNCIEIATHRHGCCVLQR 635
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP----QVTADVVAQLAGR 473
C+ Q L ++ N LS + +GNYV+QY++ ++ + + L +
Sbjct: 636 CLDSGTTTQCESLCEQLLINIDRLSFNPFGNYVIQYVITKEVETGNYNYSYKYINILKHK 695
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP---EIVQLILDPYGNYVIQTAWD 530
LSL K SNVV+K L S II E+++ EI L+ D YGNYV+QTA D
Sbjct: 696 IKDLSLHKFGSNVVEKLL--RTPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTALD 753
Query: 531 VSQ--GRRIRQTLYDLVV 546
V+ + + LYD+V
Sbjct: 754 VTHESNEALYKKLYDIVT 771
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 46/354 (12%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+++ + I + KD+ GCRFLQ++++ P I +E+ ++ ELM N+LIQ
Sbjct: 25 ATLXDFTNEIYYLCKDQHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNYLIQ 84
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ +NE+Q T L+ + S + +RI D G+R +QKL++ T+E+ +
Sbjct: 85 KLLERVNEKQRTTLVRNASS---QFVRIALDPHGTRALQKLVECVN-------TKEEFQI 134
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+VS+L + V LS+ +GNHVI++CLQK PP + + E+C+ +A R GCC+LQ
Sbjct: 135 IVSSLSSYVVLLSRDLNGNHVIQKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQR 194
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK------------------I 459
C Q L V N LS YGNYVVQY+L ++
Sbjct: 195 CFDHGSPAQCENLSLKVGENXVELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDT 254
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-VQLILD 518
+ ++ L LS K SNVV+K L + +I ++++ P+I + L+ D
Sbjct: 255 SKAIGLIITALRDNLVRLSTHKFGSNVVEKSL--RIPTLAPVLIGQLLKEPDIPIILLHD 312
Query: 519 PYGNYVIQTAWDVSQ-------GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
YGNYV+QT DV+ R+R + + V N+P +G+ +L+K+
Sbjct: 313 AYGNYVLQTTLDVADDNSFRCLSERLRPAMNE--VRNTP------HGRRILSKL 358
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 173/331 (52%), Gaps = 33/331 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L G I + KD+ GCR+LQKK++E P H N+L QKL
Sbjct: 565 LEDLVGEIPALCKDQHGCRYLQKKLEEGVP-----------------EHHPFGNYLCQKL 607
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT----QEQQ 355
+ +EQ + SV L+ I ++ G+R +QK++D T++Q Q
Sbjct: 608 LEYSTDEQRNMICESVA---HDLVGISLNMHGTRAVQKMIDF--LSTQRQANPSSYDAQI 662
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
++ AL V+L K +GNHVI++CL + P+ + + +A +C+++AT R GCC+L
Sbjct: 663 HSIIMALSMHVVTLIKDLNGNHVIQKCLNRLIPEDNQFIYNAVAAHCVEVATHRHGCCVL 722
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q CI A + Q+ +L+ ++ NA L + YGNYV + T V+ Q G
Sbjct: 723 QRCIDHASDSQRIQLVTEITFNALTLVQDPYGNYVSCHT------SRTDAVIRQFIGNVC 776
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
ALS+ K SSNV++KC+ + +I E++ + +L+ D +GNY +QTA D ++
Sbjct: 777 ALSVQKFSSNVIEKCIRVAEHNTRKMLIEELLNRNRLEKLLRDSFGNYCVQTALDYAEPT 836
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ R L + + P +++ YGK + +K++
Sbjct: 837 Q-RMLLVEGIRPILPLIRNTPYGKRIQSKLQ 866
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 176/329 (53%), Gaps = 12/329 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E RG + +AKD + L + + + I+ I +I + ELM ++ L
Sbjct: 184 MENRRGSLYAIAKDAVWSKKLLETIYQGTKETIDTIFDRIIVHICELMVDPYGKDVVMLL 243
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
IG EQ+ +++ V + + IC DL G+ +Q+LLD+ Q+ + ++
Sbjct: 244 IGKCCSEQIIQIVDLVTQDMFQFVNICFDLRGTAAIQELLDSIHKRANDQIPR-----IM 298
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ ++ + L+KS + +I C + FP + + LLE +A++C +++ D++GCCL Q C+
Sbjct: 299 DLINSVGLQLAKSSNARFLILSCFRLFPLSHCRYLLEVVAQHCYEISIDQNGCCLYQQCL 358
Query: 420 P---LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ E + RLI++V+++A L + YGNYVVQYI+ L V +V QL G Y
Sbjct: 359 DKNRVPNPEIRQRLISEVISHALRLCLNCYGNYVVQYIVELNNQHVINALVRQLIGNYAH 418
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
L+ K S+VVQK L G + +++ + +I L+LDP+GNYVIQTAW VS+
Sbjct: 419 LARNKYGSHVVQKLLRLRGVDTRLIVVDLL---SQIDTLLLDPFGNYVIQTAWFVSKD-D 474
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+R L + N ++ + +G +L K+
Sbjct: 475 VRHMLRYHIELNIRLMRCNKFGNKLLEKL 503
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 167/298 (56%), Gaps = 10/298 (3%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
T +S ++ +I+ + D+ GCR LQ+ ++ +P+ I+ I + + LM N+
Sbjct: 205 TPFSILQLSYVQILALCHDQLGCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNY 264
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
L QKL N+ Q T + V+SS +L+ I ++ G+R +QK+L+ P EQ
Sbjct: 265 LCQKLFEHANDFQRTAFV-KVISS--KLVPISLNMHGTRALQKVLELVSLP-------EQ 314
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+V +L+N V L K +GNHVI++CL +F + ++ + I N ++++T R GCC+
Sbjct: 315 IDCVVKSLQNNVVLLIKDLNGNHVIQKCLNQFSSEDSQFIYSAICRNIVEVSTHRHGCCV 374
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q C A Q+ L+ ++ A L + ++GNYVVQY+L LK P T V+ + +
Sbjct: 375 VQRCFDHASPAQREMLVLHIIPVALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKV 434
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS+ K SSNV++K L + +E +I+E++ + +L+ D + NYV+QTA + +
Sbjct: 435 RMLSVQKFSSNVMEKSLSMASDELRALLIDELLDKKHLSRLLKDQFANYVVQTALECA 492
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 112/150 (74%)
Query: 394 LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQY 453
L++E+AENC ++AT+RSGCC+LQ C+ +Q E + +L+A+++ANA L+E YGNYVVQ+
Sbjct: 13 LIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQH 72
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV 513
++GLKIP+V +++ Q G + +LS K SNVV+K L+ES +EQS+ II E++R P +
Sbjct: 73 LMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNVS 132
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
L+LDP+GN+VIQ+A VS+ R ++ Y
Sbjct: 133 MLLLDPFGNFVIQSALSVSKVRSFPKSHYS 162
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 185/350 (52%), Gaps = 40/350 (11%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID--------------IEMILSEVIDDL 283
+ +E+ G I + KD+ GCRFLQ+++D I+ MI +E+ +
Sbjct: 53 AKLEDFTGEIFSLCKDQHGCRFLQRQLDLGKDIENKQNANNILSSDIAATMIFNEIYLKI 112
Query: 284 HELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
ELM N+LIQKL ++ +Q I+ V ++ +RI D G+R +QKL++
Sbjct: 113 IELMIDPFGNYLIQKLFENVSVDQR---IILVKNAAPDFIRIALDPHGTRALQKLVECIS 169
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
T+ + L++ L VSLS+ +GNHV+++CLQK + + + + +C
Sbjct: 170 -------TEAECKLIIDNLSPHIVSLSRDLNGNHVVQKCLQKLSSKQNQFIFDTASSHCN 222
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
D+AT R GCC+LQ C+ Q+ +L + + NA LS +GNYVVQY+L Q
Sbjct: 223 DIATHRHGCCVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQSV 282
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLIL-DPYGN 522
A ++ + LSL K SNV++K L S + + G++ ++ + + Q +L DP+GN
Sbjct: 283 AIILNHIKSHLIVLSLHKFGSNVIEKSLRIS--KLTNGLVQALLMNADHFQDLLNDPFGN 340
Query: 523 YVIQTAWDVSQGRRIRQTLYDLVVDNS------PFLQSHMYGKNVLAKVR 566
YV+QT+ DV+ T DLV +S P +++ +G+ +++KV+
Sbjct: 341 YVLQTSLDVA-------TKADLVKLSSALQPLLPNVKNTPHGRRIMSKVQ 383
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 175/330 (53%), Gaps = 12/330 (3%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDER-NPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ + LRGR+ AKD+ GCR+LQ+ +D +P +++++ E+I + ELM Q AN LIQ
Sbjct: 194 TADSLRGRVYETAKDQHGCRYLQRWLDTNCDPETLQVMMDEIIPHVGELMTDQYANFLIQ 253
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++ ++ + +++V++ Q + I G+ +QK+++ T+E+ +
Sbjct: 254 KLFDIMPDD--VRYKVAIVAAPQ-ICMISLTPHGTFSVQKMIETIS-------TREETEI 303
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ AL V L K HGNHVI++ LQ+F D + + ++ +C+ +A ++ GCC+LQ
Sbjct: 304 ICEALAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVSTDCVSIAKNKQGCCVLQR 363
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ A QKA L+ V+A + + +GNYV+QY+L ++ + L
Sbjct: 364 SLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHL 423
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
S+ K SSNV++K L + + E+ I LI D YGNYV+QTA ++ +
Sbjct: 424 SMNKFSSNVMEKVLRGASRPVQVMYMEEMCNPGIISHLIQDDYGNYVLQTALTINAPAQA 483
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
Q L + + P +++ Y K + K+
Sbjct: 484 EQ-LVNAIRPFMPLIKNAPYAKKMEGKMEA 512
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 178/326 (54%), Gaps = 19/326 (5%)
Query: 214 STNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIE 273
++NA++ + R R + + +++ G I + KD+ GCRFLQK++D +
Sbjct: 4 TSNATNSNSAEKQRKIEESSRFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAAD 63
Query: 274 MILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSR 333
I E D ELM N+LIQKL+ + EQ +++L+ +SS + I + G+R
Sbjct: 64 AIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTR 120
Query: 334 VMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKD 393
+QKL++ + T E+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ +
Sbjct: 121 ALQKLIECIK-------TDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQF 173
Query: 394 LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQY 453
+ + I+++C+D+AT R GCC+LQ C+ EQ L ++A L+ +GNYVVQY
Sbjct: 174 IFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQY 233
Query: 454 ILGLKIPQ----VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
I+ + + T +V L R LS+ K SNV++K L S +I EI+ +
Sbjct: 234 IITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKIL--KTAIVSEPMILEILNN 291
Query: 510 ---PEIVQLILDPYGNYVIQTAWDVS 532
I L+ D YGNYV+QTA D+S
Sbjct: 292 GGETGIQSLLNDSYGNYVLQTALDIS 317
>gi|22327539|ref|NP_199125.2| pumilio 14 [Arabidopsis thaliana]
gi|75339252|sp|Q4PSD1.1|PUM14_ARATH RecName: Full=Pumilio homolog 14; Short=APUM-14; Short=AtPUM14
gi|67633854|gb|AAY78851.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332007528|gb|AED94911.1| pumilio 14 [Arabidopsis thaliana]
Length = 518
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 190/370 (51%), Gaps = 15/370 (4%)
Query: 200 LSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYS-SIEELRGRIILVAKDEQGCR 258
L++GFL+D S S Y N + +++ R + + + AKD++
Sbjct: 158 LNNGFLNDVPS-SSRDRVSDYYTNRFGYEGYNYWRGNEGFDYNQCQASFSAFAKDKEMSE 216
Query: 259 FLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS 318
L + + ++ I + +I D+ ELM + ++Q L+ + EQ+ +L+ V
Sbjct: 217 RLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQ 276
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
+ + IC D G+ +Q LL + Q+ + +V ++ + + LSKS H V
Sbjct: 277 MFQFVNICIDSLGTNAIQVLLTCINERAKDQIPR-----IVDVVRTVALQLSKSNHAIFV 331
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP---LAQEEQKARLIADVV 435
I C + FP + + LLE I +NC +A D+ GCCLLQ C + E + RLI + +
Sbjct: 332 ILACFRLFPL-HCRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAI 390
Query: 436 ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESG 495
ANA L + YGNYVVQYI+ L + +V QL G Y L+ K S+ VQK LL+
Sbjct: 391 ANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQK-LLKLR 449
Query: 496 EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSH 555
S I+ +++R EI L+LDP+GNYVIQTAW VS+ +R+ L + N P ++ +
Sbjct: 450 WIDSRVIVIDLLR--EIDTLLLDPFGNYVIQTAWFVSKD-DVRRMLRYHIERNIPMMRCN 506
Query: 556 MYGKNVLAKV 565
+G VL K+
Sbjct: 507 KFGNKVLEKL 516
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 162/301 (53%), Gaps = 21/301 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ G I + KD+ GCRFLQ+++DE I SE+ D + ELM N+L+QKL
Sbjct: 477 LEQFVGSIYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQKL 536
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+N+ ++ V + + + I D G+R +QKL++ + T+E+ +LV
Sbjct: 537 FERINQRDRVEI---VKNCSPQFMDIALDAHGTRALQKLVECTD-------TEEETQILV 586
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
++L+ +SLS+ NHV+++ L+ F T+ + + ++ + ++ R+GCC++Q C+
Sbjct: 587 ASLQPSILSLSRDFKSNHVVQKMLENFSNKDTQFIYDAACDDIIKISNHRNGCCVVQRCL 646
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD------VVAQLAGR 473
EQ L +V ++ L+ + YGNYV+QYIL + Q T D +V L
Sbjct: 647 DFGNTEQLDALCGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFN 706
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE---IVQLILDPYGNYVIQTAWD 530
LSL K SNVV+ L S +I +I+ + +++L+ D YGNYV+QTA D
Sbjct: 707 AIDLSLNKFGSNVVESILRTPA--VSDVMITKILNSNDESGLLKLLHDSYGNYVLQTALD 764
Query: 531 V 531
+
Sbjct: 765 I 765
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 182/353 (51%), Gaps = 20/353 (5%)
Query: 223 NFYARARHHHHRT--SYS---SIEELRGRIILVAKDEQGCRFLQKKVDERNPID--IEMI 275
N +A HH H YS + E LRG + +AKD+ GCRFLQ+ + N + +I
Sbjct: 171 NGHAVNPHHSHVAVRGYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRII 230
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
++EV+ + ELM Q AN LIQKL ++ ++ K+ + Q+++ I G+ +
Sbjct: 231 MNEVVPHVAELMTDQYANFLIQKLFDMMPQDVRYKV---ACVAAQKIISIALTPHGTFSV 287
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QK+++ ++E+ +L AL V L K HGNHVI++ LQ+F + +
Sbjct: 288 QKMVET-------IASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADKEFIY 340
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ +C+ +A ++ GCC+LQ C+ A Q+A L+ ++ ++E +GNYV+QY+L
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-Q 514
+ T + L + K SSNV++K +L + + E + P++V +
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEK-VLRGASQPVQEMYVETMCSPDVVSR 459
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
LI D +GNYV+QTA + + ++L V P +++ Y K + K+ G
Sbjct: 460 LIQDDFGNYVLQTALTICSSAQA-ESLVSAVRPLMPIIRNAPYAKKLEGKIDG 511
>gi|357445493|ref|XP_003593024.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482072|gb|AES63275.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 396
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 159/284 (55%), Gaps = 21/284 (7%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV- 302
RG ++ +A E+ C++L +DE NP + MILS+V D LH+LM H+ + LI+K+
Sbjct: 113 RGSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAK 172
Query: 303 --LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ EQM ++ ++++ +++ +C + G+RVMQ +L +P + ++
Sbjct: 173 KGMAMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRHPF-------MKFVVAY 225
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
A+K T +L K+ +G+HVI +C++ FP K +L+E+A NC ++ATD+ GC ++ C+
Sbjct: 226 AVKRNTTALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLK 285
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ L+ +++NA VL Y++ +K P ++ + ++ LS+
Sbjct: 286 HGEGTAIDLLVTQIISNAMVL-----------YVIKMKFPLAKEWMIEEFQNKFDRLSMN 334
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
K +SNV++ L S + I+ EI+R ++++ DP+GNYV
Sbjct: 335 KYASNVMEYLLRFSNKSAVKVIVEEIMRSRNFLKVLQDPFGNYV 378
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 173/327 (52%), Gaps = 18/327 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ RG I ++ D GCR LQ +D + I +I EV D L ELM N+L QKL
Sbjct: 167 IDSYRGHIKEMSHDHNGCRALQSCLDNASQKMIPIIYEEVGDSLTELMMDSFGNYLFQKL 226
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL- 358
+ V + EQ +++ V + +++ D+ G+R +QKL+ Q+ Q+ +L
Sbjct: 227 LDVSSVEQRREVLRKV---KHKIVAASFDVHGTRSVQKLI---------QICHGQEDMLK 274
Query: 359 --VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+ AL+ LS +GNHVI+RCL P +Y + EE+ ++C++++ R GCC++Q
Sbjct: 275 DIMDALRGNIAKLSSDSNGNHVIQRCLNHMPEEYKVYVYEEVVKSCVNISMQRHGCCVVQ 334
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ A E+ ++ +V +A L +GNYV+QY++ + + G+ A
Sbjct: 335 RCLDFAPEKYHNMMLDAIVNSAVELICDPFGNYVIQYLIEKGKESEKERIARCVLGKVVA 394
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV-SQGR 535
LS K SSNV++K LL + E ++ E+ P++ ++ D Y NYVIQ A + S+G+
Sbjct: 395 LSCQKYSSNVIEKILLFAPESVRNEVVAELAECPKLRDVLHDIYANYVIQQALKLESKGQ 454
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVL 562
++ LY+ V L GK++L
Sbjct: 455 --QRMLYNAVRPYEEELSRSTGGKHIL 479
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 39/234 (16%)
Query: 369 LSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKA 428
+S +G ++ CL + EE+ ++ +L D G L Q + ++ EQ+
Sbjct: 177 MSHDHNGCRALQSCLDNASQKMIPIIYEEVGDSLTELMMDSFGNYLFQKLLDVSSVEQRR 236
Query: 429 RLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLGKCSSNV 486
++ V S +G VQ ++ + Q + D++ L G LS ++V
Sbjct: 237 EVLRKVKHKIVAASFDVHGTRSVQKLIQICHGQEDMLKDIMDALRGNIAKLSSDSNGNHV 296
Query: 487 VQKCLLESGEEQSTGIINEII---------RH------------PE-------------I 512
+Q+CL EE + E++ RH PE
Sbjct: 297 IQRCLNHMPEEYKVYVYEEVVKSCVNISMQRHGCCVVQRCLDFAPEKYHNMMLDAIVNSA 356
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRI-RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+LI DP+GNYVIQ + + +G+ ++ + V+ L Y NV+ K+
Sbjct: 357 VELICDPFGNYVIQ--YLIEKGKESEKERIARCVLGKVVALSCQKYSSNVIEKI 408
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 186/346 (53%), Gaps = 34/346 (9%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 16 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 75
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 76 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 125
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 126 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 185
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 186 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 245
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 246 LKPRAIELSIHKFGSNVIEKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 303
Query: 527 TAWDVSQG------RRIRQTLYDLVVD---NSPFLQSHMYGKNVLA 563
TA D+S RR+ + + L+V N+P +GK ++
Sbjct: 304 TALDISHKQNDYLYRRLSEIVAPLLVGPIRNTP------HGKRIIG 343
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
L D+ GC LQ + + + + + L S+GNY++Q +L +VT
Sbjct: 32 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLL----EEVTT 87
Query: 465 D---VVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
+ V+ +++ +F +SL + +QK + ++ I+ + +R P VQL D
Sbjct: 88 EQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTVQLSKDLN 146
Query: 521 GNYVIQTAWDVSQGRRIR----QTLYDLVVDNSPFLQSHMYGKNVLAK 564
GN+VIQ +R++ Q ++D + D+ + +H +G VL +
Sbjct: 147 GNHVIQKCL-----QRLKPENFQFIFDAISDSCIDIATHRHGCCVLQR 189
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 196/358 (54%), Gaps = 45/358 (12%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ E+ G + L+A+D+ GCR LQK V+E +D ++I E+ID + EL N+++QK
Sbjct: 210 SMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQK 269
Query: 299 LIGVLNEEQMTKLILSVVSSQQR-LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L+ V +EEQ T +I+SV++S+ R L++IC + +G+RV+QK++ + T++Q +L
Sbjct: 270 LLVVSDEEQRT-MIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVK-------TKQQIAL 321
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPD---------------------------- 389
+ SAL+ + L +G HV++ CL+ P+
Sbjct: 322 VKSALEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKLRLTKLSHILISFLLFLTYVSSDEC 381
Query: 390 ---YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
+ + ++E E C LAT + GC +LQ + Q RL+A++ ++ LS+ +
Sbjct: 382 CEIWCQFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPF 441
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYVVQ ++ ++ V +++ L+ K SS+V++KCL + E ++ I+ E+
Sbjct: 442 GNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAE-IVREL 498
Query: 507 IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ +P QL+ DPY NYVIQTA V++G +R L + V LQS+ Y K + +K
Sbjct: 499 LSYPNFEQLLQDPYANYVIQTALSVTKG-AVRARLVEKVKRFGK-LQSNPYCKKIFSK 554
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 19/306 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 2 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 61
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 62 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 111
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 112 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 171
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 172 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 231
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 232 LKPRAIELSIHKFGSNVIEKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 289
Query: 527 TAWDVS 532
TA D+S
Sbjct: 290 TALDIS 295
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
L D+ GC LQ + + + + + L S+GNY++Q +L +VT
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLL----EEVTT 73
Query: 465 D---VVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
+ V+ +++ +F +SL + +QK + ++ I+ + +R P VQL D
Sbjct: 74 EQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTVQLSKDLN 132
Query: 521 GNYVIQTAWDVSQGRRIR----QTLYDLVVDNSPFLQSHMYGKNVLAK 564
GN+VIQ +R++ Q ++D + D+ + +H +G VL +
Sbjct: 133 GNHVIQKCL-----QRLKPENFQFIFDAISDSCIDIATHRHGCCVLQR 175
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 19/306 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 2 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 61
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 62 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 111
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 112 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 171
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 172 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 231
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 232 LKPRAIELSIHKFGSNVIEKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 289
Query: 527 TAWDVS 532
TA D+S
Sbjct: 290 TALDIS 295
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
L D+ GC LQ + + + + + L S+GNY++Q +L +VT
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLL----EEVTT 73
Query: 465 D---VVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
+ V+ +++ +F +SL + +QK + ++ I+ + +R P VQL D
Sbjct: 74 EQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTVQLSKDLN 132
Query: 521 GNYVIQTAWDVSQGRRIR----QTLYDLVVDNSPFLQSHMYGKNVLAK 564
GN+VIQ +R++ Q ++D + D+ + +H +G VL +
Sbjct: 133 GNHVIQKCL-----QRLKPENFQFIFDAISDSCIDIATHRHGCCVLQR 175
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 193/381 (50%), Gaps = 26/381 (6%)
Query: 188 ATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRI 247
A+ NN S Y+N+ G N S R N ++ + SS+E RG
Sbjct: 168 ASRNNVSDYYTNI----------FGYGVNNSWRSN----EGCTYNQDQAASSMENGRGSY 213
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+A D + L+K + I+MI +I + ELM N +++ LIG + EQ
Sbjct: 214 FSIATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQ 273
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+ ++ V + + IC + G+ +Q LL + Q+ + ++ A+ ++ +
Sbjct: 274 IILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPR-----IMDAISSVAL 328
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP---LAQE 424
L+++ + +VI C + F + LLE ++++C +A D++GCCLLQ C +
Sbjct: 329 QLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNH 388
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
E + RLI++V+ +A L + +GNYVVQY++ L T +V +L Y L+ K S
Sbjct: 389 EIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGS 448
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
+VVQK L G + S I+ +++R I L+LDP+GNYVIQTAW VS+ +RQ L
Sbjct: 449 HVVQKLLKLRGID-SKLIVVDLLR--GIDTLLLDPFGNYVIQTAWFVSK-EDVRQMLRYY 504
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
+ N ++ + +G +L K+
Sbjct: 505 IERNIRLMRCNKFGNKILEKL 525
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 46/310 (14%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y ++ +G I +AKD+ GCRFLQ+K +E ++I +ID + ELM + AN+L+
Sbjct: 386 YENMVGAKGYIYFMAKDQNGCRFLQQKFEEGKD-QADLIFEGIIDHIPELMANSFANYLV 444
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL+ V +EEQ ++I + +LLR+ + G+R +QKL++ + TR+Q+
Sbjct: 445 QKLLDVCDEEQRLRIIAILTEDPVKLLRVSLNSHGTRSIQKLIETVK--TRKQIM----- 497
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L++SAL+ + L P+GNHVI++CL+ F
Sbjct: 498 LIISALQPGFIHLVNDPNGNHVIQKCLKNF------------------------------ 527
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ ++ ++I D Y S + NYV+QY+L LKIP A + + G Y
Sbjct: 528 -------DAEENKIIYDGTDTHYKNSLNVLTNYVIQYVLDLKIPFANAQLASLFQGNYVY 580
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
LS K SNVV+KCL ++ II E+I QL+ DPY NYVI TA ++G
Sbjct: 581 LSKQKVGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALAQTRG-H 639
Query: 537 IRQTLYDLVV 546
+R L + ++
Sbjct: 640 LRSALVNAIL 649
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 183/357 (51%), Gaps = 20/357 (5%)
Query: 223 NFYARARHHHHRT--SYS---SIEELRGRIILVAKDEQGCRFLQKKVDERNPID--IEMI 275
N +A HH H YS + E LRG + +AKD+ GCRFLQ+ + N + +I
Sbjct: 171 NGHAVNPHHSHVAVRGYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRII 230
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
++E++ + ELM Q AN LIQKL ++ ++ K+ + +++ I G+ +
Sbjct: 231 MNEIVPHVAELMTDQYANFLIQKLFDMMPQDVRYKV---ARVAAPKIISIALTPHGTFSV 287
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QK+++ ++E+ +L AL V L K HGNHVI++ LQ+F + +
Sbjct: 288 QKMVET-------IASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADKEFIY 340
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ +C+ +A ++ GCC+LQ C+ A Q+A L+ ++ ++E +GNYV+QY+L
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASSSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-Q 514
+ T + L + K SSNV++K +L + + E + P++V +
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEK-VLRGASQPVQEMYVETMCSPDVVSR 459
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
LI D +GNYV+QTA + + ++L V P +++ Y K + K+ G +R
Sbjct: 460 LIQDDFGNYVLQTALTICSSAQA-ESLVSAVRPLMPIIRNAPYAKKLEGKIDGIVHR 515
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 181/353 (51%), Gaps = 20/353 (5%)
Query: 223 NFYARARHHHHRT--SYS---SIEELRGRIILVAKDEQGCRFLQKKVDERNPID--IEMI 275
N +A HH H YS + E LRG + +AKD+ GCRFLQ+ + N + +I
Sbjct: 171 NGHAVNPHHSHVAVRGYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRII 230
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
++EV+ + ELM Q AN LIQKL ++ ++ K+ + +++ I G+ +
Sbjct: 231 MNEVVPHVAELMTDQYANFLIQKLFDMMPQDVRYKV---ARVAAPKIISIALTPHGTFSV 287
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QK+++ ++E+ +L AL V L K HGNHVI++ LQ+F + +
Sbjct: 288 QKMVET-------IASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADKEFIY 340
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ +C+ +A ++ GCC+LQ C+ A Q+A L+ ++ ++E +GNYV+QY+L
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-Q 514
+ T + L + K SSNV++K +L + + E + P++V +
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEK-VLRGASQPVQEMYVETMCSPDVVSR 459
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
LI D +GNYV+QTA + + ++L V P +++ Y K + K+ G
Sbjct: 460 LIQDDFGNYVLQTALTICSSAQA-ESLVSAVRPLMPIIRNAPYAKKLEGKIDG 511
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 183/353 (51%), Gaps = 21/353 (5%)
Query: 218 SSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILS 277
+ R NN R + + + + + G I+ + KD+ GCRFLQ+++ E + +I
Sbjct: 127 THRKNNGKPRRGDDASKYANAKLSDFVGDILNLCKDQHGCRFLQRQL-ELDEGAATIIFQ 185
Query: 278 EVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQK 337
E+ + ELM N+LIQKL + EQ I+ V ++ ++I D G+R +QK
Sbjct: 186 EIYFKIVELMIDPFGNYLIQKLFEHITVEQR---IVLVKNASGEFMKISMDPHGTRALQK 242
Query: 338 LLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
L++ T E+ L++ AL+ V LS+ +GNHV+++CLQ + + +
Sbjct: 243 LIECIS-------TAEESKLIIEALQPHIVILSRDLNGNHVVQKCLQNLKTSDNQFIFDA 295
Query: 398 IAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL 457
+ NCL +AT R GCC+LQ C+ Q+ +L + NA L+ +GNYVVQY+L
Sbjct: 296 VCANCLAIATHRHGCCVLQRCLDHGDPLQRQQLSLKIAENATKLAIDPFGNYVVQYVLSH 355
Query: 458 KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIRHPEIVQLI 516
+ ++ + ALSL K SNV++K L + Q ++ ++ +L+
Sbjct: 356 GDDKSIEIILNHIKSNTIALSLHKFGSNVIEKSLRINKLSNQLIEVL--LLNESRFEELL 413
Query: 517 LDPYGNYVIQTAWDVSQGR---RIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D +GNYV+QT+ DV+ R+ Q+L L+ P +++ +G+ ++ K++
Sbjct: 414 NDGFGNYVLQTSLDVASPTDLARLSQSLIPLL----PNIKNTPHGRRIMNKLQ 462
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 201/410 (49%), Gaps = 49/410 (11%)
Query: 197 YSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQG 256
Y N H + H G++ A R R ++ + I++ RG I+ + D+ G
Sbjct: 460 YQNYGHNYGMTHFSGGNNGGAPYR-----QRKGEDANKYQNAKIQDYRGHILDLCSDQHG 514
Query: 257 CRFLQKKVDERNPIDIE----------------------MILSEVIDDLHELMRHQSANH 294
CRFLQ+++ + ++ MI +E+ D++ LM N+
Sbjct: 515 CRFLQRELAKEQDCLLKRDDNKSDGSKGDGEIKDESVSTMIFNELHDEVVNLMLDPFGNY 574
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD--AGEYPTRQQLTQ 352
LIQKL+ ++ EQ +LI S + RI D G+R +QKL++ + ++++
Sbjct: 575 LIQKLVECVSNEQRLELI---KYSSSQFNRIALDSHGTRALQKLIECVGASHDNQEEVVD 631
Query: 353 EQQS--LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
E S L++ +L+ V LS+ +GNHV+++CL + + + I NC +A R
Sbjct: 632 ENDSASLIIKSLEPSIVLLSRDLNGNHVVQKCLINLSNKVNQVIYDTITSNCEVVACHRH 691
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC++Q C+ + Q L +V V + YGNYVVQY+L Q + A L
Sbjct: 692 GCCVIQRCLDYGNDRQVETLSHEVTTKLGVFTTDPYGNYVVQYVLSHGDSQSIDTIFAYL 751
Query: 471 AGRYFALSLGKCSSNVVQKCL-------LESGEE-----QSTGIINEIIR--HPEIVQLI 516
++ LS+ K SNV++K L E+ EE +S +I+E+++ + ++
Sbjct: 752 RDHFYQLSIHKFGSNVLEKSLRLEQKGKKENEEENNSSTRSASLIDELLKLSSDQFSTVL 811
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D +GNYV+QT DV+Q ++ + L +++V P ++S +G+ + K++
Sbjct: 812 NDSFGNYVLQTCLDVAQLDQMTK-LREMLVPLLPEIKSTPHGRRIANKLQ 860
>gi|410075265|ref|XP_003955215.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
gi|372461797|emb|CCF56080.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
Length = 493
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 30/343 (8%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
+ II +A D Q C+ LQ +D+ N +I++I + D+ L+ + N+ IQKLI +
Sbjct: 160 KNEIINLATDYQTCKILQSYLDKLNRHEIDVIYKIIEKDIIGLILNSYGNYFIQKLIISV 219
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
+ E L+ ++ + I D+ G+RV+Q L+D E T ++Q ++ +
Sbjct: 220 SLENRVNLLKTIAG---QFNSIATDIHGTRVIQSLVDCVE-------TIQEQEQIIKLID 269
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
N + P+ NH+I++ L KF P+ + + + +NC+ ++ D+ GCC++Q CI
Sbjct: 270 NDLIQFCHDPNSNHIIQKILAKFDPEALIGIYQIMLQNCISISKDKFGCCIIQRCIDYGT 329
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK----IPQVTADVVAQLAGRYFALSL 479
Q A LI +V NA LS +YGNYV+QYI+ ++ + T D++ L G+ +S
Sbjct: 330 SNQVATLIGHIVKNAESLSFDAYGNYVIQYIIKMEQNIYSCKYTFDILNNLKGKLTTISN 389
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHP-------EIVQLILDPYGNYVIQTAWDVS 532
K SSN+++ LL + II E + + I L+ D YGNYV+QTA ++
Sbjct: 390 HKFSSNIIE--LLLKNPNVADVIIKEFLSYGAKGNTFNSINVLLNDKYGNYVLQTA--LA 445
Query: 533 QGRRIRQTLYDLVVDNS-PFLQSHM----YGKNVLAKVRGNKN 570
R+ LY+ +V+ P L + +GK + K++ N N
Sbjct: 446 SSRQNNILLYNQLVNKILPLLTDEVKDTPHGKKISKKIKMNNN 488
>gi|385303897|gb|EIF47942.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 591
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 161/290 (55%), Gaps = 14/290 (4%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ +A+D+ GCR+LQ+K+DE I V ELM N+L+QK++G E
Sbjct: 269 VLELARDQCGCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVMGCCTVE 328
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q+ +++S S L + D G+R +QKL++ + T++Q+ LL L
Sbjct: 329 QLDAVLISAGPS---LCAVAVDQHGTRALQKLIE-------RIXTRKQRMLLERYLAPYV 378
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
V+L +GNHVI++C+Q+F + ++++I+ N + ++T + GCC+LQ + +Q
Sbjct: 379 VALIGDLNGNHVIQKCVQRFRDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNKCNMQQ 438
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+L +V ++ L E Y NYVVQY+ ++I + A ++A +A LS K SSNV
Sbjct: 439 IEQLGXQIVQHSLALMEDQYANYVVQYLASMEIDSLNAQLLATVAPCVRQLSCQKFSSNV 498
Query: 487 VQKCL----LESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
V+KCL + + +++EI+ + LI D YGNYV+QTA +VS
Sbjct: 499 VEKCLRIRSYRVFSQFVSRLLDEILLPDVLPVLIRDQYGNYVVQTAMEVS 548
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 397 EIAE-NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+IAE N L+LA D+ GC LQ + + A++ V A+A L +GNY++Q ++
Sbjct: 263 KIAEMNVLELARDQCGCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVM 322
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
G + V+ A+++ + + +QK L+E + ++ E P +V L
Sbjct: 323 GCCTVEQLDAVLISAGPSLCAVAVDQHGTRALQK-LIERIXTRKQRMLLERYLAPYVVAL 381
Query: 516 ILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD----NSPFLQSHMYGKNVLAKVRGNKN 570
I D GN+VIQ +R R + +VD N + +H +G VL K+ N
Sbjct: 382 IGDLNGNHVIQKCV-----QRFRDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNKCN 435
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ V+ + GC LQK +++ N IE + +++ LM Q AN+++Q L
Sbjct: 407 VDQISANIVPVSTHKHGCCVLQKLLNKCNMQQIEQLGXQIVQHSLALMEDQYANYVVQYL 466
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + +L+ +V ++L C S S V++K L Y Q ++
Sbjct: 467 ASMEIDSLNAQLLATVAPCVRQL--SCQKFS-SNVVEKCLRIRSYRVFSQFVSRLLDEIL 523
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA 399
L ++ L + +GN+V++ ++ +Y E+A
Sbjct: 524 --LPDVLPVLIRDQYGNYVVQTAMEVSSAEYKLRFARELA 561
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 49/338 (14%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E++P ++MI E + ELM N
Sbjct: 444 RFGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGN 503
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+ E
Sbjct: 504 YLCQKLLEFSND-----------------------------------------------E 516
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q++ L++ V ++ + HG +++ ++ F + + + + E+C+ + T R GCC
Sbjct: 517 QRTALINNAAPQLVKIALNQHGTRALQKMIE-FISTPEQFIYDAVGESCVPVGTHRHGCC 575
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L P + G
Sbjct: 576 VLQRCIDHASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGN 635
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + + +++E++ E+ +++ D + NYV+QTA D +
Sbjct: 636 IPALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFAD 695
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L + + P ++ +G+ + K+ +N+
Sbjct: 696 -PEYRTKLVEAIRPILPAIRQTPHGRRIAGKILSVENQ 732
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 170/327 (51%), Gaps = 13/327 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G +I A+D+QG RF+Q K++ P + +MI +E+ ++ LM H+ N+++QKL
Sbjct: 31 LRDLCGHVIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKL 90
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EEQ L + ++ + + G RVMQK L + R++L E
Sbjct: 91 FDFGSEEQKLALAGKMTG---HIVNLTMHIYGCRVMQKALVSLPTEVRKKLIDE------ 141
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N V + +GNHV+++C + P Y + +++E L + C ++Q +
Sbjct: 142 --LRNHVVQCANDENGNHVMQKCFETIEPGYLQFIVDECIGKVRQLCSHSYACRVIQRLL 199
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ EQ ++ ++ AN L++ YGNYV+QYIL +P+ + ++ + G ALS
Sbjct: 200 EYCKFEQSIPILQEIHANTLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSC 259
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-IVQLILDPYGNYVIQTAWDVSQGRRIR 538
K +SNV++KC+ + T ++ E+ + I +++ DP+ NYV+Q +V+
Sbjct: 260 HKYASNVMEKCVTHGSSLERTVLMEEVCATKDGIFKMMKDPFANYVVQRMVEVADA-HYS 318
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L + N LQ GK+ LAK+
Sbjct: 319 KLLVQKIALNKEQLQKSTSGKHALAKL 345
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 165/310 (53%), Gaps = 20/310 (6%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y + +R ++ AKD LQ + + I+ I +I + ELM + +
Sbjct: 144 AYGYMYGIRNTLLSRAKDGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKV 203
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+KL+ +EQ+T+++ V+ +R+C G+ +Q L+ R ++EQ
Sbjct: 204 FRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHAIQGLM-------RSLCSEEQI 256
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
S + L +++ L+K + VI C +F P +T+ LLE I +NC +A D++GCC+L
Sbjct: 257 SRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCML 316
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYG----------NYVVQYILGLKIPQVTAD 465
+ I + E + LI ++++ A L + YG NYVVQY+L LK +VT+
Sbjct: 317 KKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSA 376
Query: 466 VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
+ L G Y LS K S+VVQKC LES E S II E++ +I L++DPYG+YVI
Sbjct: 377 LSKHLDGNYVQLSYDKYGSHVVQKC-LESREFSSRRIIAELL--SDIDSLLVDPYGDYVI 433
Query: 526 QTAWDVSQGR 535
QTAW VS+ R
Sbjct: 434 QTAWIVSEVR 443
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 167/325 (51%), Gaps = 23/325 (7%)
Query: 224 FYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDL 283
F RH I EL+ I+ A D+ G RF+Q+K D + + E+I +E++ +
Sbjct: 654 FLEELRHKIQNGVKIEIAELKDHIVECAMDQYGSRFIQQKYDITSSAEKELIFNEILPES 713
Query: 284 HELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
LM N+++QKL EE + L ++ + +L++ + G RV+QK L+
Sbjct: 714 FNLMNDVFGNYVVQKLFEYGTEEHRSTLAEQLLGN---VLKLTKSMYGCRVVQKALEV-- 768
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
++ QQ +LVS LK+ + +GNHVI++C++K P D + +++ + E
Sbjct: 769 ------ISLHQQKILVSELKDNIIDCINDQNGNHVIQKCIEKMPCDDIEFIIKPVIEKTS 822
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQV 462
+L GC ++Q + + E +I ++ + + L+ +GNYV+Q+IL K+ +
Sbjct: 823 ELCVHTYGCRVIQRVLENSNEAYTRSIIEGILNDLHNLTMDQFGNYVIQHILENGKVQED 882
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----------RHPE 511
VV + G+ LS K +SNVV+KCL + E+ +I E + ++
Sbjct: 883 KDRVVKSIKGKVIELSNHKFASNVVEKCLQYASEKDKAELIEEFLDLNFDEEAAMNQNGV 942
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRR 536
+ Q++ D YGNYVIQ +VSQG++
Sbjct: 943 LYQMMKDRYGNYVIQKCIEVSQGKQ 967
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ E+ ++ ++ A D+ G +Q + +K + +++ ++ L +GNYVVQ +
Sbjct: 670 IAELKDHIVECAMDQYGSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKL 729
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ + + QL G L+ VVQK L Q +++E+ + I+
Sbjct: 730 FEYGTEEHRSTLAEQLLGNVLKLTKSMYGCRVVQKALEVISLHQQKILVSELKDN--IID 787
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
I D GN+VIQ + I + + V++ + L H YG V+ +V N N +
Sbjct: 788 CINDQNGNHVIQKCIEKMPCDDI-EFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAYT 846
Query: 575 R 575
R
Sbjct: 847 R 847
>gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 175/340 (51%), Gaps = 14/340 (4%)
Query: 200 LSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYS-SIEELRGRIILVAKDEQGCR 258
L++GFL+D S S Y N + +++ R + + + AKD++
Sbjct: 158 LNNGFLNDVPS-SSRDRVSDYYTNRFGYEGYNYWRGNEGFDYNQCQASFSAFAKDKEMSE 216
Query: 259 FLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS 318
L + + ++ I + +I D+ ELM + ++Q L+ + EQ+ +L+ V
Sbjct: 217 RLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQ 276
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
+ + IC D G+ +Q LL + Q+ + +V ++ + + LSKS H V
Sbjct: 277 MFQFVNICIDSLGTNAIQVLLTCINERAKDQIPR-----IVDVVRTVALQLSKSNHAIFV 331
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP---LAQEEQKARLIADVV 435
I C + FP + + LLE I +NC +A D+ GCCLLQ C + E + RLI + +
Sbjct: 332 ILACFRLFPL-HCRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAI 390
Query: 436 ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESG 495
ANA L + YGNYVVQYI+ L + +V QL G Y L+ K S+ VQK LL+
Sbjct: 391 ANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQK-LLKLR 449
Query: 496 EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
S I+ +++R EI L+LDP+GNYVIQTAW VS+ R
Sbjct: 450 WIDSRVIVIDLLR--EIDTLLLDPFGNYVIQTAWFVSKVR 487
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 209/412 (50%), Gaps = 25/412 (6%)
Query: 160 GLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASS 219
G+ +G+ P P+ +T + T + S YS+ S GF +T +
Sbjct: 344 GVMYNGITSPGPDLVTPPPPIGVNTFGLGLAHGDSGRYSSNSLGF--------PATRSMG 395
Query: 220 RYNNFYARAR----HHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMI 275
++ R+R ++R + + +L ++ ++D+ G RF+Q+K++ NP D +++
Sbjct: 396 SFDGLSGRSRLLEDFRNNRLTNPQLRDLLNHMVEFSQDQHGSRFIQQKLERCNPSDRQLV 455
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
+E+I ++L+ N++IQK + EQ +++ ++ + ++L++ + G RV+
Sbjct: 456 FNEIISHSYQLIIDVFGNYVIQKFLEFGTAEQKQQIVDNI---KGKVLQLSLQMYGCRVI 512
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
Q L++ L QEQQ ++V+ L+N + K +GNHVI++ ++ P D + ++
Sbjct: 513 QTALES--------LNQEQQMIIVNELQNSILRCVKDQNGNHVIQKIIECLPADNLEFII 564
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ L+T GC ++Q + EEQ ++ ++ N +L + YGNYV+Q+IL
Sbjct: 565 SAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQYMPIMEEIHKNHEMLIQDQYGNYVIQHIL 624
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
+ ++ + GR LS K +SNV++KC+ S + +I E+ + P+ + +
Sbjct: 625 NRGKMEDRQMILRAVMGRIVTLSQHKFASNVIEKCVTTSNRTERALLIEEVCQSPDSLFI 684
Query: 516 IL-DPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ D + NYV+Q D+ + RQ + + + L+ YGK++L K+
Sbjct: 685 MMKDQFANYVVQKMLDMGDSAQ-RQKMVQKMKPHVSNLKRFTYGKHILTKLE 735
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 161/305 (52%), Gaps = 13/305 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ L G + +++D+ GCR LQ+ +DE P IL+E + E M N+L QK+
Sbjct: 3 LRSLLGNVRRLSRDQVGCRLLQQALDEDGPSAATAILNEGLTFWAEAMVDPFGNYLFQKI 62
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + E+ L+ SV + RL+ +L G+R +QK++++ + T ++ L
Sbjct: 63 LERITPEERVILVKSVST---RLVNASLNLHGTRSVQKIVESKKQDTAAKI-------LT 112
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL+ L HGNH I+R L K P YT+ + + +A + D+A R GCC++Q C+
Sbjct: 113 DALEPSAARLCIDSHGNHAIQRILLKLPYQYTQFIFDAVAASVEDVARHRHGCCVIQRCL 172
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ L+ +V + L + +YGNYVVQY+L + + + GR L++
Sbjct: 173 DSRHSVARSHLVTRIVEKSLELMQDAYGNYVVQYVLDVCGDDEVHAICESVIGRVCLLAI 232
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QGRR 536
K SSNV++KCL + +NE+ + +L++DP+GNYV+Q A VS Q R
Sbjct: 233 QKFSSNVMEKCLERCTDRVREEYLNELNDSDRLRELMMDPFGNYVVQRALSVSTHAQAIR 292
Query: 537 IRQTL 541
+ +T+
Sbjct: 293 LVETM 297
>gi|241952587|ref|XP_002419015.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
gi|223642355|emb|CAX42597.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
Length = 789
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 191/379 (50%), Gaps = 58/379 (15%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R + + S + +++ G I+ + KD+ GCRFLQ+++ N + +I +E+ + EL
Sbjct: 429 RRKEDGAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--FNETNATLIFNEIYFKVVEL 486
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N+LIQKL ++N EQ +L+L + S L RI D G+R +QKL+D
Sbjct: 487 MIDPFGNYLIQKLFTMINLEQ--RLVL-INQSSNELFRIALDPHGTRSLQKLIDV----- 538
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKF--------PPDYTKD----- 393
E+ ++ L + V LS+ +GNHV+++ L KF +KD
Sbjct: 539 --IENNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFNTISHNANSSHSSKDETNHE 596
Query: 394 -------LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
+ + I N L +A R GCC+LQ C+ ++Q +L ++ + LS Y
Sbjct: 597 NQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPY 656
Query: 447 GNYVVQYILG------LKI------PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLES 494
GNYVVQY+L KI QV +++ ++ + LSL K SNV++KCL
Sbjct: 657 GNYVVQYVLNKYSVSQTKIIDDEEDKQVMDNIIQEIKSNFIQLSLHKFGSNVIEKCL--- 713
Query: 495 GEEQSTGIINEIIRH-------PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+ T I N++I + QL+ DP+GNYV+QT+ DV+ + Q L +++
Sbjct: 714 ---KITSISNDLIDNLIELDHGQAFNQLLNDPFGNYVLQTSLDVANLEQFEQ-LSKILLP 769
Query: 548 NSPFLQSHMYGKNVLAKVR 566
P ++S +G+ +L K++
Sbjct: 770 LLPNIKSTPHGRRILNKIQ 788
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 19/306 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 2 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 61
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G R +QKL++ + T E
Sbjct: 62 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGCRALQKLIECIK-------TDE 111
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GC
Sbjct: 112 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCR 171
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 172 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 231
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH---PEIVQLILDPYGNYVIQ 526
L R LS+ K SNV++K L S +I EI+ + I L+ D YGNYV+Q
Sbjct: 232 LKPRAIELSIHKFGSNVIEKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQ 289
Query: 527 TAWDVS 532
TA D+S
Sbjct: 290 TALDIS 295
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
L D+ GC LQ + + + + + L S+GNY++Q +L +VT
Sbjct: 18 LCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLL----EEVTT 73
Query: 465 D---VVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
+ V+ +++ +F +SL +QK + ++ I+ + +R P VQL D
Sbjct: 74 EQRIVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEAQIVVDSLR-PYTVQLSKDLN 132
Query: 521 GNYVIQTAWDVSQGRRIR----QTLYDLVVDNSPFLQSHMYGKNVLAK 564
GN+VIQ +R++ Q ++D + D+ + +H +G VL +
Sbjct: 133 GNHVIQKCL-----QRLKPENFQFIFDAISDSCIDIATHRHGCRVLQR 175
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 53/330 (16%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S S +E G+I + KD+ CRFLQKK+DE ++ ++ EV ++ELM +
Sbjct: 559 STSPLESFLGKIYPLCKDQYRCRFLQKKLDENPRNNVAIVFPEVYAHINELM--TDPFDI 616
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
I+KL + EQ
Sbjct: 617 IEKLT--------------------------------------------------SNEQI 626
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SLL AL LS +GNHVI++CL KF + + + + EN +++AT R GCC+L
Sbjct: 627 SLLTLALSPHVAKLSCDLNGNHVIQKCLHKFSSEKLQFIFTAMEENIVEIATHRHGCCVL 686
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q + A EE K RL V+ANA L + +GNYVVQY+ L+ + +V Q +G
Sbjct: 687 QRSLDRAGEENKRRLAFKVIANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHIC 746
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR 535
LS+ K SSN ++KC+ S E ++ E+++ + +L+ D Y NYVIQ+ G
Sbjct: 747 DLSMQKFSSNAIEKCIRVSTPESCERMLEEVLQSSRMEKLLKDSYANYVIQSFLTHVTG- 805
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++Q L + P +++ +G+++ KV
Sbjct: 806 EMQQRLLQAINPLLPKIRNTCHGRHITGKV 835
>gi|123432416|ref|XP_001308417.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121890096|gb|EAX95487.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 399
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 173/326 (53%), Gaps = 21/326 (6%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
++ A+D R LQKK+ E + ++++I + + L+EL+ QSAN +IQKL EEQ
Sbjct: 82 VMQARDPMKSRSLQKKMTECSKQELDIIFNSLYPSLNELVFDQSANFVIQKLCETATEEQ 141
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
K + +S L I D RV+Q+ ++ + +E L +ALK +
Sbjct: 142 QQKFLKFFLSD---LNNIVDHSIACRVLQRFIETTQ--------KENIEKLFNALKPNLM 190
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
SL S +GNH+++R + P +++ I + + LA D GC ++Q + EQ
Sbjct: 191 SLCLSQNGNHIVQRFVMSLPSKLNV-IIDAILPSVVPLAIDNCGCRIVQRLFDQYKIEQL 249
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++A+V+ NA L+ + YGNYVVQYIL + ++++ GR++ SL K +SNV+
Sbjct: 250 ESIVAEVMRNAVELATNQYGNYVVQYILASNKHEHISNLLKAFKGRFYQFSLHKFASNVI 309
Query: 488 QKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT- 540
+KC+ + EE+ I EII I ++ D +GNYVIQ + G +QT
Sbjct: 310 EKCIRGASEEERMEIFPEIIGSAPDFNATRISTMVEDQFGNYVIQRIIEF--GTEEQQTA 367
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVR 566
+Y++V DN L+ Y K+VL K++
Sbjct: 368 IYNVVFDNYQKLEGIQYSKHVLLKLQ 393
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 166/296 (56%), Gaps = 14/296 (4%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
+S+EE+ G+I + K + GCRFLQKK++E+ + + +I +EV D L+ELM +LI
Sbjct: 422 TSLEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLI 481
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+L+ + Q +++ + + + C + G +QKLL Q L+ +Q
Sbjct: 482 PQLMKYCDNNQRRQIVDKIAPNVETFA--CH-VYGIHGIQKLL--------QYLSPDQVD 530
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++S++KN + LSK GN++++ L++F P+ + + + I N ++ T + GC ++
Sbjct: 531 SIISSIKNKVIQLSKDSKGNYLVQSFLKQFSPEVNQFVCDAIMNNIQEICTHKVGCTVVN 590
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A +Q +L+ + ++ L + +GNYVVQ++L K ++ ++ L G
Sbjct: 591 RCIDNANPQQLEQLVDRITQHSLKLVQDQFGNYVVQHLLS-KNKSYSSKLIKSLLGNIAE 649
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS+ K SSNV++KCL + E II E I +I+ L+ D Y N+VIQTA DV+
Sbjct: 650 LSVQKFSSNVIEKCLQVADTETYESIIKE-ITEADILNLLQDKYANFVIQTALDVA 704
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGE-EQSTGIINEIIRHPEIVQLILD 518
P+VT+ + ++ G+ + L+ + +QK L E + E T I NE+ H + +L++D
Sbjct: 419 PKVTS--LEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDH--LNELMID 474
Query: 519 PYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYG 558
PYG Y+I + RQ + D + N H+YG
Sbjct: 475 PYGQYLIPQLMKYCDNNQRRQ-IVDKIAPNVETFACHVYG 513
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 161/296 (54%), Gaps = 18/296 (6%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+ +++ G I+ + KD+ GCRFLQ+++ N + ++I +E+ + ELM N+L+Q
Sbjct: 364 AKVQDFTGSILSLCKDQHGCRFLQREL--YNETNTDLIFNEICPKISELMIDPFGNYLVQ 421
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL ++N +Q +LIL + ++ LLRI D G+R QKL+D E + ++ S
Sbjct: 422 KLFEMVNSDQ--RLIL-IKNTSSELLRISLDPHGTRAFQKLIDVIETEEEINIIIDKVSP 478
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
V V+L +GNH+I++ + K P+ E I +N +A R GCC+LQ
Sbjct: 479 HV-------VTLIYDSNGNHLIQKIITKLAPEI---FYEIICDNLFSIACHRHGCCVLQK 528
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ E Q+ +L ++ + LS +GNYV+QYIL + ++ ++ L
Sbjct: 529 CLDHGSESQRKQLSLEISKYTFELSLDPFGNYVIQYILKKGDKESIDTLLEKIKFNLINL 588
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEII-RHPEIVQLILDPYGNYVIQTAWDVS 532
K SN+++ CLL ST +IN +I + E +++ DP+GNYVIQT+ DVS
Sbjct: 589 CTNKFGSNIIE-CLLRI-PILSTELINCLIEKSDEFYKMVNDPFGNYVIQTSLDVS 642
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 49/338 (14%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + +E +G + + KD+ GCR+LQKK++E+NP ++MI E + ELM N
Sbjct: 511 RFGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGN 570
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+L QKL+ N+ E
Sbjct: 571 YLCQKLLEYSND-----------------------------------------------E 583
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q++ L++ V ++ + HG +++ ++ F + + + + +C+ + T R GCC
Sbjct: 584 QRTALINNAAPQLVKIALNQHGTRALQKMIE-FISTPEQFIYDAVGASCVPVGTHRHGCC 642
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ CI A +Q+ARLI + NA+ L + +GNYVVQYIL L + G
Sbjct: 643 VLQRCIDHASGDQRARLIEQITKNAFTLVQDPFGNYVVQYILDLNERHFIEPICRSFRGN 702
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
ALS K SSNV++KC+ + + +I E++ E+ +++ D + NYV+QTA D +
Sbjct: 703 IPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDFAD 762
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
R L D + P ++ +G+ + K+ +N+
Sbjct: 763 PDS-RNKLIDAIRPILPAIRQTPHGRRITGKIMSAENQ 799
>gi|323304919|gb|EGA58676.1| Puf4p [Saccharomyces cerevisiae FostersB]
Length = 705
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 149/265 (56%), Gaps = 14/265 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++ G I + KD+ GCRFLQK++D + I E D ELM N
Sbjct: 439 RFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGN 498
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL+ + EQ +++L+ +SS + I + G+R +QKL++ + T E
Sbjct: 499 YLIQKLLEEVTTEQ--RIVLTKISSPH-FVEISLNPHGTRALQKLIECIK-------TDE 548
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ ++V +L+ TV LSK +GNHVI++CLQ+ P+ + + + I+++C+D+AT R GCC
Sbjct: 549 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 608
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ----VTADVVAQ 469
+LQ C+ EQ L ++A L+ +GNYVVQYI+ + + T +V
Sbjct: 609 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHL 668
Query: 470 LAGRYFALSLGKCSSNVVQKCLLES 494
L R LS+ K SNV++K L +S
Sbjct: 669 LKPRAIELSIHKFGSNVIEKNLEDS 693
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 14/244 (5%)
Query: 325 ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQ 384
+C D G R +QK LD L + + K+ TV L GN++I++ L+
Sbjct: 455 LCKDQHGCRFLQKQLDI--------LGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLE 506
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV-LSE 443
+ + L + + + ++++ + G LQ I + +++A+++ D + V LS+
Sbjct: 507 EVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 566
Query: 444 HSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
GN+V+Q L P+ + ++ ++ + V+Q+CL EQ +
Sbjct: 567 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 626
Query: 504 NEIIRHPEIVQLILDPYGNYVIQ---TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKN 560
++++ + +L LDP+GNYV+Q T + L+ + L H +G N
Sbjct: 627 DKLLA--LVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSN 684
Query: 561 VLAK 564
V+ K
Sbjct: 685 VIEK 688
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 172/330 (52%), Gaps = 15/330 (4%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPID--IEMILSEVIDDLHELMRHQSANHLIQK 298
E LRG + +AKD+ GCRFLQ+ + N + +I++EV+ + ELM Q AN LIQK
Sbjct: 3 EGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQK 62
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L ++ ++ K+ + +++ I G+ +QK+++ ++E+ +L
Sbjct: 63 LFDMMPQDVRYKV---ARVAAPKIISIALTPHGTFSVQKMVETIA-------SREEMDIL 112
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
AL V L K HGNHVI++ LQ+F + + + +C+ +A ++ GCC+LQ C
Sbjct: 113 REALSKDVVRLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRC 172
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ A Q+A L+ ++ ++E +GNYV+QY+L + T + L
Sbjct: 173 LEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLC 232
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV-QLILDPYGNYVIQTAWDVSQGRRI 537
+ K SSNV++K +L + + E + P++V +LI D +GNYV+QTA + +
Sbjct: 233 MNKFSSNVIEK-VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTICSSAQ- 290
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
++L V P +++ Y K + K+ G
Sbjct: 291 AESLVSAVRPLMPIIRNAPYAKKLEGKIDG 320
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 35/293 (11%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G I +AKD+ GCR+LQ K E ++ I +I+ + +LM N+L+QK++ V +
Sbjct: 423 GSIYHMAKDQNGCRYLQDKFLE-GKHHVDAIFEGIINHIADLMISSFGNYLVQKMLEVCD 481
Query: 305 EEQMTKLILSVVSSQ-QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
E Q ++IL + ++L+ I + G+RV+Q+L++ +++Q L++SAL+
Sbjct: 482 EGQRLRIILVLTQDPVKQLIAISLNTHGTRVVQRLIETVR-------SRDQIILIISALQ 534
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQ 423
+ L P+GNHVI++CL F + K CI A+
Sbjct: 535 PNFMLLVNDPNGNHVIQKCLTNFGAEDNKR------------------------CISNAR 570
Query: 424 EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
+A LI ++ A + L++ +GNYVVQY+L LKIP A + +Q G+Y LS K S
Sbjct: 571 GVYQANLIVEICARGFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKYIYLSKQKVS 630
Query: 484 SNVVQKCLLESGEEQSTGIINE--IIRHPEIVQLILDPYGNYVIQTAWDVSQG 534
SNVV++CL ++ I++E ++ QL+ DPY NYVI TA ++G
Sbjct: 631 SNVVERCLKFFPDDAKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHTKG 683
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 25/341 (7%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDE-----------RNPID---IEMILSEVIDDLH 284
+++++ G++ +++D+ GCR LQ+K+DE + P + + I E + +L
Sbjct: 380 ALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLS 439
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
+M N+L QKL +++ Q +L+V + R+ +L G+R +QK+++
Sbjct: 440 MMMIDPFGNYLFQKLFVKVDDHQR---LLAVEAVTDRMPEAAVNLHGTRCVQKVVELCR- 495
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
T Q +++ +L V LS P+GNHV++R LQ P +LE I + +
Sbjct: 496 ------TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQ 549
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
+A R GCC+LQ C+ A + +LI +V N L + +GNYVVQY+L + T
Sbjct: 550 VAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETY 609
Query: 465 DVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
+ + G +LS K SSNV++ CL + E + + E+ + I +LILD Y NYV
Sbjct: 610 MLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYV 669
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+Q A V+ + L + + + +QS G+ + AK+
Sbjct: 670 VQRALTVANNEEGLK-LVNAIRPHLHSMQSTSSGRRIAAKI 709
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 155/292 (53%), Gaps = 7/292 (2%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G+I +++D+ GCR +Q+ +DE I +IL E + E M N+L QK++ +
Sbjct: 1 GQIRRLSRDQVGCRLVQQALDEEGTIAATLILKEGLPFWGEAMVDPFGNYLFQKILEKVT 60
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT----QEQQSLLVS 360
++ L+ SV RL+ +L G+R +QKL++ Q+ + +L
Sbjct: 61 PQERIMLVKSV---SPRLVNASLNLHGTRSVQKLVELCAQDEHNQVVGANEESAADILTY 117
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
+L L HGNHVI+R L K ++K + + +A + D+A R GCC++Q C+
Sbjct: 118 SLAPAAARLCIDSHGNHVIQRILLKLNYKHSKFVFDAVALSVGDVARHRHGCCVIQRCLD 177
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
E ++ L+ +V + L + +YGNYVVQY+L + Q V +AGR L++
Sbjct: 178 SQPTEARSHLVLRIVDKSLELMQDAYGNYVVQYVLDVCSDQDVQAVCESVAGRVNLLAIQ 237
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
K SSNV++KCL + ++E+ R I +L++DP+GNYV+Q A V+
Sbjct: 238 KFSSNVMEKCLERCSDRIKEMYLDEMSRPERIRELMMDPFGNYVVQRALSVA 289
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 29/256 (11%)
Query: 324 RICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCL 383
R+ D G R++Q+ LD + +E A+ + P GN++ ++ L
Sbjct: 5 RLSRDQVGCRLVQQALDEEGTIAATLILKEGLPFWGEAMVD--------PFGNYLFQKIL 56
Query: 384 QKFPPD----YTKDLLEEIAENCLDLATDRSGCCLLQYC-------IPLAQEEQKARLIA 432
+K P K + + L+L RS L++ C + A EE A ++
Sbjct: 57 EKVTPQERIMLVKSVSPRLVNASLNLHGTRSVQKLVELCAQDEHNQVVGANEESAADILT 116
Query: 433 DVVANAYV-LSEHSYGNYVVQYIL---GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQ 488
+A A L S+GN+V+Q IL K + D VA G G C V+Q
Sbjct: 117 YSLAPAAARLCIDSHGNHVIQRILLKLNYKHSKFVFDAVALSVGDVARHRHGCC---VIQ 173
Query: 489 KCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDN 548
+CL E + ++ I+ ++L+ D YGNYV+Q DV + + Q + + V
Sbjct: 174 RCLDSQPTEARSHLVLRIVDKS--LELMQDAYGNYVVQYVLDVCSDQDV-QAVCESVAGR 230
Query: 549 SPFLQSHMYGKNVLAK 564
L + NV+ K
Sbjct: 231 VNLLAIQKFSSNVMEK 246
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 172/323 (53%), Gaps = 15/323 (4%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ +D+ GCRFLQ++++E N +E I +++ L LM N+L QKLI V+ +Q
Sbjct: 152 MCRDQVGCRFLQQQLEEGNTGTLEYIYQQIVPLLDSLMIDPFGNYLCQKLIEVVKPDQRV 211
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
++I + ++ I ++ G+R +QKL+++ ++ + +L+ L+ ++L
Sbjct: 212 EIIEEI---GDKIHTISRNIYGTRSVQKLINSAS-------SKNEVNLIRKYLEPYVINL 261
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN--CLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI+ CL+ F + + I EN + +++ + GCC++Q CI EEQ
Sbjct: 262 IFDINGNHVIQECLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQRCIDNGNEEQL 321
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
+ L+ D+V + L + ++GNYVVQY+LG I V+ V + LS+ K SSNV+
Sbjct: 322 SSLVNDIVKYSLALVKDAFGNYVVQYVLG--IEGVSVRVTNCIIENLIELSMQKFSSNVI 379
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+K + + I + ++ ++ L+ D + NYVIQT D S G + L + ++
Sbjct: 380 EKLVATGNCKVKEIIFEQFLKFKDVAILLQDSFANYVIQTCLDKSWGEY-KLRLSNWIIP 438
Query: 548 NSPFLQSHMYGKNVLAKVRGNKN 570
+ +++ Y K + K+ G N
Sbjct: 439 HVGIIKNTPYYKKIQGKLVGVGN 461
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 167/326 (51%), Gaps = 11/326 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ LR ++ +AK+ GCR LQ+ + +P + I E+ L ELM N++ Q L
Sbjct: 217 LKGLRDHVVDMAKNYNGCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQML 276
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ V +EE+ +++ +V + ++ ++ G+R +Q L+ P+ L
Sbjct: 277 LQVCSEERRAQILSAV---RDFVIDASLNIHGTRCVQSLVQYCSSPS-------MIDSLF 326
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ L+ P+GNHVI RCLQ P + L EE+ ++C+D+AT R GCC++Q
Sbjct: 327 AALQGHIAHLAAHPNGNHVILRCLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFF 386
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A + RL+ ++ A++L + +GNYVVQ++L P+ + + G S
Sbjct: 387 LRAPPLYRNRLMNAILHEAHLLITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSC 446
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++K ++ + E+ II EI+ P ++ + NY+IQ + + G+
Sbjct: 447 QKYSSNVIEKVIVLADEQVRYQIICEIVGSPHFPAILHHNFANYIIQNLFH-NCGKENVF 505
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
LYD ++ L G+++L +
Sbjct: 506 VLYDAILPFKGELGRSTGGRHILTAL 531
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 172/332 (51%), Gaps = 13/332 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKV-DERNPIDI-EMILSEVIDDLHELMRHQSAN 293
S S+E LRG + +AKD+ GCRFLQ+ + D +I I+SE++ + ELM Q AN
Sbjct: 214 STVSVENLRGNVYELAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYAN 273
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
L+QKL ++ ++ + ++ V++ ++ I G+ +QK+++ +R++L
Sbjct: 274 FLVQKLFDIMPKD--VRYNVACVAAP-KIAAIALTPHGTFSVQKMIET--ISSREELV-- 326
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
++ AL V L K +GNH I++ LQ+F PD + + +A +C+ +A ++ GCC
Sbjct: 327 ---IIREALSKDVVRLVKDANGNHAIQKVLQRFEPDDKEFVYAAVAVDCITIAKNKQGCC 383
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ C+ A Q++ L+ ++ ++E YGNYV+QY++ + +
Sbjct: 384 VLQRCLEYASPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPH 443
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
L + K SSNV++K L ++ + +LI D +GNYV+QTA +
Sbjct: 444 LVQLCMNKFSSNVMEKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICT 503
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + L ++ P +++ Y K + K+
Sbjct: 504 AGQ-AEALVSVIRPLMPSIRNTPYAKKLEGKI 534
>gi|68476217|ref|XP_717758.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
Length = 783
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 45/370 (12%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R + + S + +++ G I+ + KD+ GCRFLQ+++ N + +I +E+ EL
Sbjct: 428 RRKEDSAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATLIFNEIYFKAVEL 485
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N+LIQKL ++N EQ +L+L + L RI D G+R +QKL+D E
Sbjct: 486 MIDPFGNYLIQKLFTMINLEQ--RLVL-INQCSNELFRIALDPHGTRSLQKLIDVIETNE 542
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP------------------ 388
++ + NI V LS+ +GNHV+++ L KF
Sbjct: 543 EIEIITR------NLYSNIVV-LSRDLNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQ 595
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + + I N L +A R GCC+LQ C+ ++Q +L ++ + LS YGN
Sbjct: 596 NQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGN 655
Query: 449 YVVQYILGL---------KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
YVVQY+L QV ++ ++ + LSL K SNV++KCL S S
Sbjct: 656 YVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKISSI--S 713
Query: 500 TGIINEII--RHPEIV-QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+I+ +I H + QL+ DP+GNYV+QT+ DV+ + Q L +++ P ++S
Sbjct: 714 KDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSLDVANLEQFEQ-LSKILLPLLPNIKSTP 772
Query: 557 YGKNVLAKVR 566
+G+ +L K++
Sbjct: 773 HGRRILNKIQ 782
>gi|238880509|gb|EEQ44147.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 783
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 45/370 (12%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R + + S + +++ G I+ + KD+ GCRFLQ+++ N + +I +E+ EL
Sbjct: 428 RRKEDSAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATLIFNEIYFKAVEL 485
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N+LIQKL ++N EQ +L+L + L RI D G+R +QKL+D E
Sbjct: 486 MIDPFGNYLIQKLFTMINLEQ--RLVL-INQCSNELFRIALDPHGTRSLQKLIDVIETNE 542
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP------------------ 388
++ + NI V LS+ +GNHV+++ L KF
Sbjct: 543 EIEIITR------NLYSNIVV-LSRDLNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQ 595
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + + I N L +A R GCC+LQ C+ ++Q +L ++ + LS YGN
Sbjct: 596 NQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGN 655
Query: 449 YVVQYILGL---------KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
YVVQY+L QV ++ ++ + LSL K SNV++KCL S S
Sbjct: 656 YVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKISSI--S 713
Query: 500 TGIINEII--RHPEIV-QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+I+ +I H + QL+ DP+GNYV+QT+ DV+ + Q L +++ P ++S
Sbjct: 714 KDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSLDVANLEQFEQ-LSKILLPLLPNIKSTP 772
Query: 557 YGKNVLAKVR 566
+G+ +L K++
Sbjct: 773 HGRRILNKIQ 782
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 45/370 (12%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R + + S + +++ G I+ + KD+ GCRFLQ+++ N + +I +E+ EL
Sbjct: 428 RRKEDSAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATLIFNEIYFKAVEL 485
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N+LIQKL ++N EQ +L+L + L RI D G+R +QKL+D E
Sbjct: 486 MIDPFGNYLIQKLFTMINLEQ--RLVL-INQCSNELFRIALDPHGTRSLQKLIDVIETNE 542
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP------------------ 388
++ + NI V LS+ +GNHV+++ L KF
Sbjct: 543 EIEIITR------NLYSNIVV-LSRDLNGNHVVQKILTKFNTISSDSNSSDSNRDGVQHQ 595
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + + I N L +A R GCC+LQ C+ ++Q +L ++ + LS YGN
Sbjct: 596 NQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGN 655
Query: 449 YVVQYILGL---------KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
YVVQY+L QV ++ ++ + LSL K SNV++KCL S S
Sbjct: 656 YVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKISSI--S 713
Query: 500 TGIINEII--RHPEIV-QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+I+ +I H + QL+ DP+GNYV+QT+ DV+ + Q L +++ P ++S
Sbjct: 714 KDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSLDVANLEQFEQ-LSKILLPLLPNIKSTP 772
Query: 557 YGKNVLAKVR 566
+G+ +L K++
Sbjct: 773 HGRRILNKIQ 782
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 18/322 (5%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ +AKD Q C LQ+++D P + + I + + + +L+ +AN LIQKL LNEEQ
Sbjct: 92 VKMAKDRQDCIMLQEQIDHATPAERDTIFNVLYPHMGDLVCDGAANFLIQKLCEYLNEEQ 151
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
T+++ + QR++ D +G RV+QK +++ P+ + AL V
Sbjct: 152 QTRMLAFFMEDVQRIV---DHPNGCRVLQKFIESTTSPSNI-------DPIFLALLPRFV 201
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
L S +GNH+ +R + K P D++ +I + DL D GC ++Q ++
Sbjct: 202 ELCSSQNGNHIAQRFIIKIP-QRVPDIINKIKTHVYDLVVDNWGCRVIQQLFDRLPIQEL 260
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ +V+ A L+ + +GNYVVQ IL P+ ++ G ++ S+ K +SNV+
Sbjct: 261 IPLVDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYEFSMHKFASNVI 320
Query: 488 QKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
+KC+ ++ +Q I EII P I +++ D +GNYVIQ + + + +
Sbjct: 321 EKCIRKANPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQRIIEFGTESQ-QNII 379
Query: 542 YDLVVDNSPFLQSHMYGKNVLA 563
Y + DN FL Y K+V++
Sbjct: 380 YLVTYDNYNFLFKCSYAKHVIS 401
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 176/331 (53%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 736 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 795
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 796 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSDIV 844
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 845 RELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRIL 904
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ ++ ++ ++ L + YGNYV+Q++L P+ + +VA++ G+ LS
Sbjct: 905 EHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQ 964
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC++ S + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 965 HKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEP 1024
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1025 AQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1054
>gi|190345122|gb|EDK36946.2| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 173/326 (53%), Gaps = 30/326 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDE-------RNPIDIEMILSEVIDDLHELMRHQSA 292
+ +LR +I+ +AKD+ GCRFLQKK+DE + + ++I S+V +++EL+
Sbjct: 102 LTQLRPQILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFG 161
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L+QKLI +E+ +T LIL +S L +I + G+R +QK++DA + QLT
Sbjct: 162 NYLVQKLIAYCSEQNIT-LILESLS--YNLFQISINQHGTRALQKIIDAVS--NKYQLT- 215
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
L+V+ L + L K +GNHVI++ L K+P D + + + I ++ L +AT + GC
Sbjct: 216 ----LIVNGLSPYIIELIKDLNGNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGC 271
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYV--LSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ EQ ++ A ++ L +GNYV+QY++ + + V
Sbjct: 272 CVLQKCLNHVTTEQLSQFSARILTFEIFIKLINDQFGNYVLQYLISINSLPINRAVFNNF 331
Query: 471 AGRYFALSLGKC--SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLIL--------DPY 520
R+ +L K SSNVV+K L + +++ Q+++ DPY
Sbjct: 332 V-RFGVSNLCKLKFSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPY 390
Query: 521 GNYVIQTAWDVSQGRRIRQTLYDLVV 546
GNYV+QT +V ++ L + V+
Sbjct: 391 GNYVVQTLIEVIVNANFKEPLMENVM 416
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 171/323 (52%), Gaps = 14/323 (4%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G ++ V+ D+ G RF+Q+K++E + D E I E++ + L N++IQK
Sbjct: 420 GNVMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEFAT 479
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
E Q+ +L + R+ + + G RV+QK+++ + + + QE LKN
Sbjct: 480 ESQLNQLADKL---NGRIFELSFHMYGCRVVQKVIEVVDMDRKIDIVQE--------LKN 528
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ +GNHVI++C++ P + ++E I L T + GC ++Q + +
Sbjct: 529 YVLKCIGDQNGNHVIQKCIECVPEERIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHD 588
Query: 425 -EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
++ ++ ++V +A L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +
Sbjct: 589 PATQSAVMNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYA 648
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SNV++KCL+ E+ G+I EI+ + Q L+ D +GNYV+Q R + L
Sbjct: 649 SNVIEKCLVYGTPEERDGLIREIVSSGQTFQALMKDQFGNYVVQKVLQTCDDRHLEMILS 708
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ + + L+++ YGK++++++
Sbjct: 709 SIKLHLNE-LKTYTYGKHIVSRI 730
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 115/221 (52%), Gaps = 19/221 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQK---KVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
++L GRI ++ GCR +QK VD ID I+ E+ + + + + Q+ NH+IQ
Sbjct: 488 DKLNGRIFELSFHMYGCRVVQKVIEVVDMDRKID---IVQELKNYVLKCIGDQNGNHVIQ 544
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K I + EE++ +I +++S ++ +C G RV+Q++L+ P QS
Sbjct: 545 KCIECVPEERIPFVIEAILS---QIFMLCTHQYGCRVIQRVLEHCHDPA-------TQSA 594
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+++ + L++ GN+V++ LQ P+ ++++++ L L+ + +++
Sbjct: 595 VMNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASNVIEK 654
Query: 418 CIPLAQEEQKARLIADVVANA---YVLSEHSYGNYVVQYIL 455
C+ E++ LI ++V++ L + +GNYVVQ +L
Sbjct: 655 CLVYGTPEERDGLIREIVSSGQTFQALMKDQFGNYVVQKVL 695
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVD----ERNPIDIEMILSEVIDDLHELMRHQSANHL 295
++EL+ ++ D+ G +QK ++ ER P IE ILS++ L HQ +
Sbjct: 523 VQELKNYVLKCIGDQNGNHVIQKCIECVPEERIPFVIEAILSQIF----MLCTHQYGCRV 578
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQ+++ ++ +++ + Q + +D G+ V+Q +L G+ E++
Sbjct: 579 IQRVLEHCHDPATQSAVMNEIV--QHACGLTEDKFGNYVVQHVLQHGK--------PEER 628
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGC 412
S ++ L + LS+ + ++VI++CL P+ L+ EI + L D+ G
Sbjct: 629 SSIIQKLSGQVLFLSQQKYASNVIEKCLVYGTPEERDGLIREIVSSGQTFQALMKDQFGN 688
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
++Q + + +++ + + L ++YG ++V I L I
Sbjct: 689 YVVQKVLQTCDDRHLEMILSSIKLHLNELKTYTYGKHIVSRIEKLII 735
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 176/331 (53%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 848 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 907
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 908 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSDIV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRIL 1016
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ ++ ++ ++ L + YGNYV+Q++L P+ + +VA++ G+ LS
Sbjct: 1017 EHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQ 1076
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC++ S + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 1077 HKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEP 1136
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1137 AQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 179/345 (51%), Gaps = 20/345 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNP-IDI-EMILSEVIDDLHELMRHQSANHLI 296
+ E LRG++ AKD+ GCR+LQ+ + + +P DI I+SE++ + ELM Q AN L+
Sbjct: 189 TAESLRGKVYEAAKDQHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFLV 248
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL ++ + +L ++ V++ ++ I G+ +QK+++ +QE+
Sbjct: 249 QKLFDIMPAD--VRLKVATVAAP-KIAAIALKPHGTFSVQKMIETIS-------SQEELV 298
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++ AL V L K +GNH I++ LQ+F + + +A +C+ +A ++ GCC+LQ
Sbjct: 299 IIREALSKDVVRLVKDANGNHAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQ 358
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ A Q++ L+ ++ ++E YGNYV+QY++ +
Sbjct: 359 RCLEHASPSQRSTLVRHILGCCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQ 418
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV---SQ 533
L + K SSNV++K L +N++ +LI D +GNYV+QTA + +Q
Sbjct: 419 LCINKFSSNVMEKVLGRVSLPVQEMYVNKMCSPEVAARLIQDDFGNYVLQTALTICSPAQ 478
Query: 534 GRRIRQTLYDLV--VDNSPFLQSHMYGK--NVLAKVRGNKNRFHN 574
+ L LV + N+P+ + + GK +VL K+ ++ +N
Sbjct: 479 AEHLVSILRPLVPSIKNTPYAKK-LEGKIESVLQKIANDRVLINN 522
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 171/332 (51%), Gaps = 13/332 (3%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKV-DERNPIDI-EMILSEVIDDLHELMRHQSAN 293
S S+E LRG + +AKD+ GCRFLQ+ + D +I I+SE++ + ELM Q AN
Sbjct: 214 STVSVENLRGNVYELAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYAN 273
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
L+QKL ++ ++ + ++ V++ ++ I G+ +QK+++ +R++L
Sbjct: 274 FLVQKLFDIMPKD--VRYSVACVAAP-KIAAIALTPHGTFSVQKMIET--ISSREELV-- 326
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
++ AL V L K +GNH I++ LQ F PD + + +A +C+ +A ++ GCC
Sbjct: 327 ---IIREALSKDVVRLVKDANGNHAIQKVLQLFEPDDKEFVYAAVAVDCITIAKNKQGCC 383
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+LQ C+ A Q++ L+ ++ ++E YGNYV+QY++ + +
Sbjct: 384 VLQRCLEYASPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPH 443
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
L + K SSNV++K L ++ + +LI D +GNYV+QTA +
Sbjct: 444 LVQLCMNKFSSNVMEKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTICT 503
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + L ++ P +++ Y K + K+
Sbjct: 504 AGQ-AEALVSVIRPLMPSIRNTPYAKKLEGKI 534
>gi|146423478|ref|XP_001487667.1| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 174/326 (53%), Gaps = 30/326 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDE-------RNPIDIEMILSEVIDDLHELMRHQSA 292
+ +LR +I+ +AKD+ GCRFLQKK+DE + + ++I S+V +++EL+
Sbjct: 102 LTQLRPQILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFG 161
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L+QKLI +E+ +T ++ S++ + L +I + G+R +QK++DA + QLT
Sbjct: 162 NYLVQKLIAYCSEQNITLILESLLYN---LFQISINQHGTRALQKIIDAVS--NKYQLT- 215
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
L+V+ L + L K +GNHVI++ L K+P D + + + I ++ L +AT + GC
Sbjct: 216 ----LIVNGLSPYIIELIKDLNGNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGC 271
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYV--LSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ EQ ++ A ++ L +GNYV+QY++ + + V
Sbjct: 272 CVLQKCLNHVTTEQLSQFSARILTFEIFIKLINDQFGNYVLQYLISINSLPINRAVFNNF 331
Query: 471 AGRYFALSLGKC--SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLIL--------DPY 520
R+ +L K SSNVV+K L + +++ Q+++ DPY
Sbjct: 332 V-RFGVSNLCKLKFSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPY 390
Query: 521 GNYVIQTAWDVSQGRRIRQTLYDLVV 546
GNYV+QT +V ++ L + V+
Sbjct: 391 GNYVVQTLIEVIVNANFKEPLMENVM 416
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 728 LRDLLGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 787
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 788 FEFGNLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 836
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 837 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 896
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 897 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 956
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 957 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1016
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1017 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1046
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ SE++ ++LM N++IQK
Sbjct: 724 LRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 832
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 833 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 892
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 893 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 952
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 953 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1012
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1013 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ SE++ ++LM N++IQK
Sbjct: 725 LRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 165/296 (55%), Gaps = 14/296 (4%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
+S+EE+ G+I + K + GCRFLQKK++E+ + + +I +EV D L+ELM +LI
Sbjct: 466 TSLEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLI 525
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+L+ + Q +++ + S + C + G +QKLL Q L+ +Q
Sbjct: 526 PQLMKYCDNNQRRQIVDKIAPSVETFA--CH-VYGIHGIQKLL--------QYLSPDQVE 574
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+++++K + LSK GN++I+ L++F P+ + + + I N ++ T + GC ++
Sbjct: 575 SIIASIKGKVIQLSKDNKGNYLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVN 634
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
CI A EQ +L+ + ++ L + +GNYVVQ++L K ++ ++ L
Sbjct: 635 RCIDNANPEQLEKLVDKITEHSLKLVQDQFGNYVVQHLLS-KNKAYSSKLIVSLKDNIAE 693
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS+ K SSNV++KC L+ + + +I + + +I+ L+ D Y N+VIQTA DVS
Sbjct: 694 LSIQKFSSNVIEKC-LQLADTPTYELIIKALTEADILSLLQDKYANFVIQTALDVS 748
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 649 LRDLLGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 708
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 709 FEFGNLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 757
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 758 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 817
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 818 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 877
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 878 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 937
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 938 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 967
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 177/336 (52%), Gaps = 13/336 (3%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
++R + + EL G I+ ++D+ G RF+Q+K++ P + +++ +E+I ++LM
Sbjct: 680 NNRLTNPHLHELVGHIVEFSQDQHGSRFIQQKLERATPQEKQLVFNEIIGAAYQLMTDVF 739
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK + E L + +L + + G RV+QK L+ +
Sbjct: 740 GNYVIQKFFEFGSLEHKLALANCI---HGHVLPLALQMYGCRVIQKALEC--------IP 788
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
QEQQ +V L + K +GNHV+++C++ PP + +++ + L++ G
Sbjct: 789 QEQQVEIVKELDGHLLKCVKDQNGNHVVQKCIECVPPAQLQFIVDGFKGQVVGLSSHPYG 848
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
C ++Q + E+Q ++ ++ ++ +L + YGNYV+Q+IL + ++ +L
Sbjct: 849 CRVMQRILEHCNEDQTGPILEELHQHSEMLVKDQYGNYVIQHILEHGRTENKNQIINELR 908
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLIL-DPYGNYVIQTAWD 530
GR LS K +SNV++KC+ S + +I+E+ + P+ + +++ D Y NYV+Q D
Sbjct: 909 GRILTLSQHKFASNVIEKCVSHSSPQTRAWLIDEVCQEPDALFIMMKDQYANYVVQKMLD 968
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
V+ ++ ++ L + + L+ YGK+++ K+
Sbjct: 969 VADPQQ-KKLLIHKIRPHILTLRKFTYGKHIITKLE 1003
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ SE++ ++LM N++IQK
Sbjct: 646 LRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKF 705
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 706 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 754
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 755 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 814
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 815 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 874
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 875 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 934
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 935 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 964
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 176/331 (53%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 844 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 903
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 904 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSDIV 952
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 953 RELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRIL 1012
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ ++ ++ ++ L + YGNYV+Q++L P+ + +VA++ G+ LS
Sbjct: 1013 EHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQ 1072
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC++ S + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 1073 HKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEP 1132
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1133 AQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1162
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 30/344 (8%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G ++ V+ D+ G RF+Q+K++ + D E I E++ + L N++IQK
Sbjct: 451 GHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFAT 510
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
E Q+++L + + L++ + G RV+QK++D + E++ +V LKN
Sbjct: 511 ESQLSQLADQL---RGHFLQLSFQMYGCRVVQKVIDV--------VDLERKISIVGELKN 559
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ +GNHVI++C++ P D+ ++E+I + L T + GC ++Q +
Sbjct: 560 SVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHN 619
Query: 425 -EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
++ ++ ++V A+ L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +
Sbjct: 620 PATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYA 679
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SNVV+KCL ++ G+I EI+ + Q L+ D +GNYV+Q RI QT
Sbjct: 680 SNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQ---------RILQTCD 730
Query: 543 D--LVVDNSPF------LQSHMYGKNVLAKVRGNKNRFHNRVAM 578
D LVV S L+++ +GK+++A+V NRV M
Sbjct: 731 DKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLIITGENRVRM 774
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQ 297
++LRG + ++ GCR +QK +D +D+E I+ E+ + + + Q+ NH+IQ
Sbjct: 519 DQLRGHFLQLSFQMYGCRVVQKVID---VVDLERKISIVGELKNSVLRCISDQNGNHVIQ 575
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K I + E+ + +I ++ Q++ +C G RV+Q++L+ P QS
Sbjct: 576 KCIECVPEDHIPFVIEDIL---QKIYPLCTHQYGCRVIQRVLEHCHNPA-------TQSA 625
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ + L++ GN+V++ L+ P+ ++++++ ++L+ + +++
Sbjct: 626 VMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 685
Query: 418 CIPLAQEEQKARLIADVVANAYV---LSEHSYGNYVVQYIL 455
C+ +++ LI ++V++ L + +GNYVVQ IL
Sbjct: 686 CLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 726
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L + + ++++ D+ G +Q + +A + + ++ +++ NA L+ +GNYV+Q
Sbjct: 446 LVNVVGHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKF 505
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ + QL G + LS VVQK + E+ I+ E+ +++
Sbjct: 506 FEFATESQLSQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGEL--KNSVLR 563
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
I D GN+VIQ + I + D++ P L +H YG V+ +V
Sbjct: 564 CISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYP-LCTHQYGCRVIQRV 613
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S + EL+ ++ D+ G +QK ++ I ++ +++ ++ L HQ +IQ
Sbjct: 552 SIVGELKNSVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQ 611
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ + ++ + +R + +D G+ V+Q +L+ G E++S
Sbjct: 612 RVLEHCHNPATQSAVMDEIV--ERAFDLTEDKFGNYVVQHVLEHGR--------PEERSS 661
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCL 414
++ L V+LS+ + ++V+++CL PD + L+ EI + L D+ G +
Sbjct: 662 IIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYV 721
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+Q + ++ +++ + + L +++G ++V + L I
Sbjct: 722 VQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 766
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 30/344 (8%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G ++ V+ D+ G RF+Q+K++ + D E I E++ + L N++IQK
Sbjct: 451 GHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFAT 510
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
E Q+++L + + L++ + G RV+QK++D + E++ +V LKN
Sbjct: 511 ESQLSQLADQL---RGHFLQLSFQMYGCRVVQKVIDV--------VDLERKISIVGELKN 559
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ +GNHVI++C++ P D+ ++E+I + L T + GC ++Q +
Sbjct: 560 SVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHN 619
Query: 425 -EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCS 483
++ ++ ++V A+ L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +
Sbjct: 620 PATQSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYA 679
Query: 484 SNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLY 542
SNVV+KCL ++ G+I EI+ + Q L+ D +GNYV+Q RI QT
Sbjct: 680 SNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQ---------RILQTCD 730
Query: 543 D--LVVDNSPF------LQSHMYGKNVLAKVRGNKNRFHNRVAM 578
D LVV S L+++ +GK+++A+V NRV M
Sbjct: 731 DKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLIITGENRVRM 774
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQ 297
++LRG + ++ GCR +QK +D +D+E I+ E+ + + + Q+ NH+IQ
Sbjct: 519 DQLRGHFLQLSFQMYGCRVVQKVID---VVDLERKISIVGELKNSVLRCISDQNGNHVIQ 575
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K I + E+ + +I ++ Q++ +C G RV+Q++L+ P QS
Sbjct: 576 KCIECVPEDHIPFVIEDIL---QKIYPLCTHQYGCRVIQRVLEHCHNPA-------TQSA 625
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ + L++ GN+V++ L+ P+ ++++++ ++L+ + +++
Sbjct: 626 VMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 685
Query: 418 CIPLAQEEQKARLIADVVANAYV---LSEHSYGNYVVQYIL 455
C+ +++ LI ++V++ L + +GNYVVQ IL
Sbjct: 686 CLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 726
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L + + ++++ D+ G +Q + +A + + ++ +++ NA L+ +GNYV+Q
Sbjct: 446 LVNVVGHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKF 505
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ + QL G + LS VVQK + E+ I+ E+ +++
Sbjct: 506 FEFATESQLSQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGEL--KNSVLR 563
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
I D GN+VIQ + I + D++ P L +H YG V+ +V
Sbjct: 564 CISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYP-LCTHQYGCRVIQRV 613
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S + EL+ ++ D+ G +QK ++ I ++ +++ ++ L HQ +IQ
Sbjct: 552 SIVGELKNSVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQ 611
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ + ++ + +R + +D G+ V+Q +L+ G E++S
Sbjct: 612 RVLEHCHNPATQSAVMDEIV--ERAFDLTEDKFGNYVVQHVLEHGR--------PEERSS 661
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCL 414
++ L V+LS+ + ++V+++CL PD + L+ EI + L D+ G +
Sbjct: 662 IIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYV 721
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+Q + ++ +++ + + L +++G ++V + L I
Sbjct: 722 VQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 766
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 38/315 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ I+ +AKD+ GCRFLQKK+DE + E+I +++ ++EL+
Sbjct: 279 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFG 338
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKLI NE + L++ ++ Q L +I + G+R +QK++D+
Sbjct: 339 NYLIQKLIVYCNESNL-DLLMEIL--QYNLFQISINQHGTRALQKIIDSLN-------NS 388
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q LL+ LK + L K +GNHVI++ L K+ P + + + I ++ +AT + GC
Sbjct: 389 HQLGLLIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGC 448
Query: 413 CLLQYC---IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
C+LQ C + L Q + +R I N +L +GNYV+QY++ + + D+ Q
Sbjct: 449 CVLQKCLNHVTLQQLGEFSRAILK-FENFKLLINDQFGNYVLQYLISIN----SLDINFQ 503
Query: 470 LAGRYFALSLG-----KCSSNVVQKCLLESGEEQSTGI--------INEIIRHPEIVQLI 516
+ + + K SSNVV+K L +S + + II ++ LI
Sbjct: 504 IFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLI 563
Query: 517 LDPYGNYVIQTAWDV 531
DPYGNYVIQT D+
Sbjct: 564 NDPYGNYVIQTMIDI 578
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 381 RCLQKFPPDYTKDL----LEEIAENCLDLATDRSGCCLLQ----------YCIPLAQEEQ 426
R QK +Y + L ++ L LA D+ GC LQ Y + LA E
Sbjct: 261 RFPQKIDKEYLASINKLPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFE- 319
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSN 485
+ + ++ Y L +GNY++Q ++ + + D++ + L F +S+ + +
Sbjct: 320 --IIFNQIYSHVYELIVDPFGNYLIQKLI-VYCNESNLDLLMEILQYNLFQISINQHGTR 376
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
+QK + G++ + ++ P I++LI D GN+VIQ + + Q +YD +
Sbjct: 377 ALQKIIDSLNNSHQLGLLIKGLK-PYIIELIKDLNGNHVIQKILNKYEPPDC-QFIYDSI 434
Query: 546 VDNSPFLQSHMYGKNVLAK 564
+D+ + +H +G VL K
Sbjct: 435 IDDLYIVATHKHGCCVLQK 453
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 727 LRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 786
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 787 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 835
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 836 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 895
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 896 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 955
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 956 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1015
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1016 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1045
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 163/314 (51%), Gaps = 36/314 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ +I +AKD+ GCRFLQK++DE + E+I +V L+EL+
Sbjct: 129 LSQLKDQIFRLAKDQHGCRFLQKRIDENVVSNSQTREANFEVIFEQVHPILYELIIDPFG 188
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKLI +E T L L + + Q L I + G+R +QK++D + +
Sbjct: 189 NYLIQKLIDYCDE---TNLNLILETLQFNLFSISINQHGTRALQKVID-------RMSSD 238
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q SLL+ LK + L K +GNHVI++ L K+ P+ + + + I ++ L +AT + GC
Sbjct: 239 YQLSLLIKGLKPYIIELIKDLNGNHVIQKILNKYSPENCQFIYDSIIQDLLVVATHKHGC 298
Query: 413 CLLQYCIPLAQEEQKARLIADVVA-NAYV-LSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ Q + +++ N ++ L +GNYV+QY++ + + D+ QL
Sbjct: 299 CVLQKCLNHVNPSQLMQFSTNILKYNVFMKLVNDQFGNYVLQYLISID----SIDINGQL 354
Query: 471 AGRYFALSL-----GKCSSNVVQKCLLE--SGEEQSTGIIN------EIIRHPEIVQLIL 517
+ + K SSNVV+K + + E +S N I ++ +LI
Sbjct: 355 YSNFVRFGVSDLCKSKFSSNVVEKLMRNCFNNEFKSVEFSNLKFSLVSQILSSDLNKLIN 414
Query: 518 DPYGNYVIQTAWDV 531
DPYGNYVIQT D
Sbjct: 415 DPYGNYVIQTLIDT 428
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 38/315 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ I+ +AKD+ GCRFLQKK+DE + E+I +++ ++EL+
Sbjct: 280 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFG 339
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKLI NE + L++ ++ Q L +I + G+R +QK++D+
Sbjct: 340 NYLIQKLIVYCNESNL-DLLMEIL--QYNLFQISINQHGTRALQKIIDSLN-------NS 389
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q LL+ LK + L K +GNHVI++ L K+ P + + + I ++ +AT + GC
Sbjct: 390 HQLGLLIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGC 449
Query: 413 CLLQYC---IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
C+LQ C + L Q + +R I N +L +GNYV+QY++ + + D+ Q
Sbjct: 450 CVLQKCLNHVTLQQLGEFSRAILK-FENFKLLINDQFGNYVLQYLISIN----SLDINFQ 504
Query: 470 LAGRYFALSLG-----KCSSNVVQKCLLESGEEQSTGI--------INEIIRHPEIVQLI 516
+ + + K SSNVV+K L +S + + II ++ LI
Sbjct: 505 IFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLI 564
Query: 517 LDPYGNYVIQTAWDV 531
DPYGNYVIQT D+
Sbjct: 565 NDPYGNYVIQTMIDI 579
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 381 RCLQKFPPDYTKDL----LEEIAENCLDLATDRSGCCLLQ----------YCIPLAQEEQ 426
R QK +Y + L ++ L LA D+ GC LQ Y + LA E
Sbjct: 262 RFPQKIDKEYLASINKLPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFE- 320
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSN 485
+ + ++ Y L +GNY++Q ++ + + D++ + L F +S+ + +
Sbjct: 321 --IIFNQIYSHVYELIVDPFGNYLIQKLI-VYCNESNLDLLMEILQYNLFQISINQHGTR 377
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
+QK + G++ + ++ P I++LI D GN+VIQ + + Q +YD +
Sbjct: 378 ALQKIIDSLNNSHQLGLLIKGLK-PYIIELIKDLNGNHVIQKILNKYEPPDC-QFIYDSI 435
Query: 546 VDNSPFLQSHMYGKNVLAK 564
+D+ + +H +G VL K
Sbjct: 436 IDDLYIVATHKHGCCVLQK 454
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 172/332 (51%), Gaps = 18/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ I+ ++D+ G RF+Q+K++ P + +M+ +E+I + LM N++IQK
Sbjct: 239 LRDIANHIVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKF 298
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ + L + + +L + + G RV+QK L++ + +QQ +V
Sbjct: 299 FEFGSPEQKSTLAQKI---RGHVLPLALQMYGCRVIQKALES--------VPSDQQKEIV 347
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L L+T GC ++Q +
Sbjct: 348 RELDGHVLKCVKDQNGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRIL 407
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ + ++ ++ N L + YGNYV+Q++L P+ +V + G+ +LS
Sbjct: 408 EHCTPEQTSPVLNELHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQ 467
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR------HPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+KC+ + + +I+E+I H + ++ D Y NYV+Q DV++
Sbjct: 468 HKFASNVVEKCVSHATRSERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAE 527
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++LAK+
Sbjct: 528 PSQ-RKLLMHKIRPHVSTLRKYTYGKHILAKL 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 96/249 (38%), Gaps = 45/249 (18%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
+ N V S+ HG+ I++ L++ P + + EI L TD G ++Q
Sbjct: 242 IANHIVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKFFEF 301
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK+ L + + L+ YG V+Q L ++V +L G +
Sbjct: 302 GSPEQKSTLAQKIRGHVLPLALQMYGCRVIQKALESVPSDQQKEIVRELDGHVLKCVKDQ 361
Query: 482 CSSNVVQKC-----------LLESGE-------------------------EQSTGIINE 505
++VVQKC ++++ E EQ++ ++NE
Sbjct: 362 NGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLNE 421
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGR---RIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ H LI D YGNYVIQ + + RI + V+ L H + NV+
Sbjct: 422 L--HHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLS----LSQHKFASNVV 475
Query: 563 AKVRGNKNR 571
K + R
Sbjct: 476 EKCVSHATR 484
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 203/413 (49%), Gaps = 30/413 (7%)
Query: 165 GLGLPRPNNLTVQRNLVAATNRYATTNNAS---PSYSNLSHGFL----SDHHHLGSSTNA 217
GL +P P N + +L + + + A+ P N G + SD + +
Sbjct: 592 GLSMPYPENSVAKSSLPSVGSGSFQSERAAHLAPMMRNSIGGSIGSWQSDIGSIAERRPS 651
Query: 218 SSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILS 277
SS F +++T ++ G+++ + D+ G RF+Q+K++ + + I
Sbjct: 652 SSSIEGF------KNNKTGSFEPSDIAGQVVEFSTDQYGSRFIQQKLETASVEEKNKIFP 705
Query: 278 EVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQK 337
E+I LM N++IQK + E Q +L+ + + +L + + G RV+QK
Sbjct: 706 EIIPHARTLMTDVFGNYVIQKFLDHGTESQRLELVSRLTGN---VLPLSLQMYGCRVIQK 762
Query: 338 LLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
L + + ++Q+ +V L + + +GNHVI++C++ P D + ++
Sbjct: 763 AL--------EMIDVDRQTQIVVELDGSVIKCIRDQNGNHVIQKCIECVPEDRIQFIISA 814
Query: 398 IAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILG 456
L L+T GC ++Q + ++ ++I D ++ + Y L++ YGNYV+Q++L
Sbjct: 815 FYGQVLALSTHPYGCRVIQRVLEHCKDMNTQQIIMDEIMQSVYTLAQDQYGNYVIQHVLE 874
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI----IRHPEI 512
PQ + ++++LAG +S K +SNVV+KCL G E+ ++NEI + + +
Sbjct: 875 HGKPQERSAIISKLAGHIVLMSQQKFASNVVEKCLTFGGPEERQLLVNEILGSTVENEPL 934
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ DP+GNYV+Q + R + + + V S L+ + YGK+++++V
Sbjct: 935 QAMMKDPFGNYVVQKVLETCNDRSLELIISRIRVHLSA-LKRYTYGKHIVSRV 986
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 175/333 (52%), Gaps = 17/333 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++ +L I+ A+D+ G RF+Q+K+++ + +D + E++ + LM N++IQK
Sbjct: 961 TLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVIQK 1020
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
+ EQ L + + ++L + + G RV+QK +++ + E Q +
Sbjct: 1021 FFELGTPEQKQILAQRI---RGQVLSLSLQMYGCRVIQKAVES--------VPLEMQISI 1069
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L + K +GNHV+++C++ PP++ + +++ ++ ++T GC ++Q
Sbjct: 1070 VKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRI 1129
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ EQ +++++ + L + YGNYV+Q++L + + +V + GR LS
Sbjct: 1130 LEHCTPEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLS 1189
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ K +SNVV+K + + + +INEI+ R +V ++ D + NYVIQ DV++
Sbjct: 1190 VHKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAE 1249
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ IR+ L + + L+ + YGK+++ K+
Sbjct: 1250 -QPIRKELMIQIRPHLGILRKYTYGKHIINKME 1281
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 116/263 (44%), Gaps = 20/263 (7%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL G +I KD+ G +QK V+ P ++ I+ D ++ + H +IQ
Sbjct: 1068 SIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQ 1127
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ EQ T ++ + Q + D G+ V+Q +L+ G+ E +S
Sbjct: 1128 RILEHCTPEQTTPILSEL---HQHTDALVKDQYGNYVIQHVLEHGK--------TEDKSR 1176
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD-------LATDRS 410
+V +K LS ++V+++ + + L+ EI E + + D+
Sbjct: 1177 IVEHIKGRVAKLSVHKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQF 1236
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG--LKIPQVTADVVA 468
++Q + +A++ + L+ + + +L +++YG +++ + +K Q+ V
Sbjct: 1237 ANYVIQKMLDVAEQPIRKELMIQIRPHLGILRKYTYGKHIINKMEKYYMKTNQLHLAVGL 1296
Query: 469 QLAGRYFALSLGKCSSNVVQKCL 491
+L L SSN+ Q L
Sbjct: 1297 NSPSPPPSLDLVNASSNITQPNL 1319
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 50/271 (18%)
Query: 345 PTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA 399
P R +L +E ++ L + L N V ++ +G+ I++ L++ + EI
Sbjct: 943 PERSRLLEEFRNSRLPCLTLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREIL 1002
Query: 400 ENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+ +L D G ++Q L EQK L + LS YG V+Q +
Sbjct: 1003 PHAYNLMIDVFGNYVIQKFFELGTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVP 1062
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKC----------------------------- 490
++ +V +L G + ++VVQKC
Sbjct: 1063 LEMQISIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYG 1122
Query: 491 -------LLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD---VSQGRRIRQT 540
L EQ+T I++E+ +H + L+ D YGNYVIQ + RI +
Sbjct: 1123 CRVIQRILEHCTPEQTTPILSELHQHTDA--LVKDQYGNYVIQHVLEHGKTEDKSRIVEH 1180
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ V L H + NV+ K N +R
Sbjct: 1181 IKGRVAK----LSVHKFASNVVEKAVANASR 1207
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 716 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 775
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 776 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 824
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 825 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKAQVFVLSTHPYGCRVIQRIL 884
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 885 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 944
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 945 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1004
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1005 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1034
>gi|344234445|gb|EGV66315.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 746
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 165/316 (52%), Gaps = 36/316 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ I+ ++KD+ GCRFLQKK+DE + E+I +E+ +L+EL+
Sbjct: 132 LSQLKSDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFG 191
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKLI + E + L+L ++ Q L +I + G+R +QK++++ P
Sbjct: 192 NYLIQKLIKYASNENL-NLMLDIL--QSNLFQISINQHGTRALQKIIESLNSPY------ 242
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q LL S LK + L K +GNHVI++ L KF P + + + I + + +AT + GC
Sbjct: 243 -QLDLLTSGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGC 301
Query: 413 CLLQYCIPLAQEEQKARLIADVVA--NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ +Q + + +++ N L +GNYV+QY++ + Q+ + L
Sbjct: 302 CVLQKCLNHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNL 361
Query: 471 AGRYFALSLG--KCSSNVVQKCLLESG------EEQSTGIIN---EIIRH-----PEIVQ 514
R+ + K SSNV++K + E + +N E++ H + +
Sbjct: 362 V-RFDMIHYCNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLNK 420
Query: 515 LILDPYGNYVIQTAWD 530
LI DP+GNYVIQT D
Sbjct: 421 LINDPFGNYVIQTLID 436
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 175/333 (52%), Gaps = 17/333 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++ +L I+ A+D+ G RF+Q+K+++ + +D + E++ + LM N++IQK
Sbjct: 964 TLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVIQK 1023
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
+ EQ L + + ++L + + G RV+QK +++ + E Q +
Sbjct: 1024 FFELGTPEQKQILAQRI---RGQVLSLSLQMYGCRVIQKAVES--------VPLEMQISI 1072
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L + K +GNHV+++C++ PP++ + +++ ++ ++T GC ++Q
Sbjct: 1073 VKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRI 1132
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ EQ +++++ + L + YGNYV+Q++L + + +V + GR LS
Sbjct: 1133 LEHCTPEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLS 1192
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ K +SNVV+K + + + +INEI+ R +V ++ D + NYVIQ DV++
Sbjct: 1193 VHKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAE 1252
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ IR+ L + + L+ + YGK+++ K+
Sbjct: 1253 -QPIRKELMIQIRPHLGILRKYTYGKHIINKME 1284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 116/263 (44%), Gaps = 20/263 (7%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL G +I KD+ G +QK V+ P ++ I+ D ++ + H +IQ
Sbjct: 1071 SIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQ 1130
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ EQ T ++ + Q + D G+ V+Q +L+ G+ E +S
Sbjct: 1131 RILEHCTPEQTTPILSEL---HQHTDALVKDQYGNYVIQHVLEHGK--------TEDKSR 1179
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD-------LATDRS 410
+V +K LS ++V+++ + + L+ EI E + + D+
Sbjct: 1180 IVEHIKGRVAKLSVHKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQF 1239
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG--LKIPQVTADVVA 468
++Q + +A++ + L+ + + +L +++YG +++ + +K Q+ V
Sbjct: 1240 ANYVIQKMLDVAEQPIRKELMIQIRPHLGILRKYTYGKHIINKMEKYYMKTNQLHLAVGL 1299
Query: 469 QLAGRYFALSLGKCSSNVVQKCL 491
+L L SSN+ Q L
Sbjct: 1300 NSPSPPPSLDLVNASSNITQPNL 1322
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 50/271 (18%)
Query: 345 PTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA 399
P R +L +E ++ L + L N V ++ +G+ I++ L++ + EI
Sbjct: 946 PERSRLLEEFRNSRLPCLTLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREIL 1005
Query: 400 ENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+ +L D G ++Q L EQK L + LS YG V+Q +
Sbjct: 1006 PHAYNLMIDVFGNYVIQKFFELGTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVP 1065
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKC----------------------------- 490
++ +V +L G + ++VVQKC
Sbjct: 1066 LEMQISIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYG 1125
Query: 491 -------LLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD---VSQGRRIRQT 540
L EQ+T I++E+ +H + L+ D YGNYVIQ + RI +
Sbjct: 1126 CRVIQRILEHCTPEQTTPILSELHQHTDA--LVKDQYGNYVIQHVLEHGKTEDKSRIVEH 1183
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+ V L H + NV+ K N +R
Sbjct: 1184 IKGRVAK----LSVHKFASNVVEKAVANASR 1210
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 174/329 (52%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+L G I+ + D+ G RF+Q+K++ + + EM+ E++ + +LM N+++QK
Sbjct: 331 QLEGHIVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYVLQKFFE 390
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
N Q+ K +L+ + ++ + + G RV+QK L EY + EQQ+ L+
Sbjct: 391 HGN--QLQKAVLAR-QMEGHVMSLSLQMYGCRVIQKAL---EY-----VLTEQQACLIRE 439
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + K +GNHVI++ +++ P + + +++ L+T GC ++Q +
Sbjct: 440 LDGYVLKCVKDQNGNHVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRVLEY 499
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L+ ++ L + YGNYV+Q+IL P+ A+++ +++GR + S K
Sbjct: 500 CTGEQKNPLLKELDDFIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHK 559
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQGRR 536
+SNVV+KC+ +EQ I+E+++ P +V ++ D Y NYV+Q +V+ +
Sbjct: 560 FASNVVEKCVDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQRMLEVATEDQ 619
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R L + + L+ + YGK+++ K+
Sbjct: 620 -RNKLIETTRPHLALLKKYPYGKHLIQKL 647
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I EL G ++ KD+ G +QK ++ I I+ ++ L H +IQ++
Sbjct: 437 IRELDGYVLKCVKDQNGNHVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRV 496
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L+ + + L++ D G+ V+Q +L+ GE ++ ++
Sbjct: 497 LEYCTGEQKNPLLKELDDFIESLIK---DQYGNYVIQHILERGE--------PRDKANII 545
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD-------LATDRSGC 412
+ +S SK ++V+++C+ + +D ++E+ + D + D+
Sbjct: 546 KKISGRVLSFSKHKFASNVVEKCVDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYAN 605
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
++Q + +A E+Q+ +LI + +L ++ YG +++Q +
Sbjct: 606 YVVQRMLEVATEDQRNKLIETTRPHLALLKKYPYGKHLIQKL 647
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 2/192 (1%)
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q++ + L+ V S HG+ I++ L+ + + + EEI N L L TD G
Sbjct: 323 KQKNYELIQLEGHIVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGN 382
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
+LQ + QKA L + + LS YG V+Q L + + A ++ +L G
Sbjct: 383 YVLQKFFEHGNQLQKAVLARQMEGHVMSLSLQMYGCRVIQKALEYVLTEQQACLIRELDG 442
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
+ ++V+QK + + II+ ++ L PYG VIQ +
Sbjct: 443 YVLKCVKDQNGNHVIQKAIERVPAQHIRFIIDAF--KGQVYHLSTHPYGCRVIQRVLEYC 500
Query: 533 QGRRIRQTLYDL 544
G + L +L
Sbjct: 501 TGEQKNPLLKEL 512
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVD-----ERNPIDIEMILSEVIDDLHELMRHQSANH 294
I+ +G++ ++ GCR +Q+ ++ ++NP+ L E+ D + L++ Q N+
Sbjct: 473 IDAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNPL-----LKELDDFIESLIKDQYGNY 527
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
+IQ ++ +I + R+L S V++K +D G RQ E
Sbjct: 528 VIQHILERGEPRDKANIIKKISG---RVLSFSKHKFASNVVEKCVDNGSKEQRQDFIDEV 584
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+ V + K + N+V++R L+ D L+E + L G L
Sbjct: 585 VKCPTDG-ECPLVLMMKDQYANYVVQRMLEVATEDQRNKLIETTRPHLALLKKYPYGKHL 643
Query: 415 LQYCIPLAQEEQKARLIADVVANAY 439
+Q LA ++K D+ N Y
Sbjct: 644 IQKLERLASIQEK-----DMADNNY 663
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 723 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 782
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 783 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 831
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 832 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 891
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 892 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 951
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 952 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEP 1011
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1012 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1041
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 134/249 (53%), Gaps = 10/249 (4%)
Query: 329 LSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP 388
+ G+R +QK +D P + Q ++ A V+L K +GNHVI++CL + P
Sbjct: 1 MHGTRAVQKTIDFISTPAQTQA-------IIDAFARNVVTLIKDLNGNHVIQKCLNRLPA 53
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
+ + + +A C+D+AT R GCC+LQ CI A E Q+ +L+ ++ + L + +GN
Sbjct: 54 GDNQFIYDAVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGN 113
Query: 449 YVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR 508
YVVQY+L L P T V Q G F LS K SSNV++KC+ + ++ E++
Sbjct: 114 YVVQYVLDLNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVD 173
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR-- 566
+ L+ D + NYV+QT D ++ + R L + + P +++ YGK + +K++
Sbjct: 174 PSRLELLLRDSFANYVVQTCLDYAEPAQ-RTHLVECIRPILPSIRNTPYGKRIQSKLQRD 232
Query: 567 GNKNRFHNR 575
G++ H R
Sbjct: 233 GSEPSRHRR 241
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 256 GCRFLQKKVDE-RNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILS 314
G R +QK +D P + I+ ++ L++ + NH+IQK + L + I
Sbjct: 3 GTRAVQKTIDFISTPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGD-NQFIYD 61
Query: 315 VVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPH 374
V++Q + + G V+Q+ +D RQQL E + +++L + P
Sbjct: 62 AVAAQ--CVDVATHRHGCCVLQRCIDHASESQRQQLVNE--------ITMYSLTLVQDPF 111
Query: 375 GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADV 434
GN+V++ L P T+ + + + L+T + +++ CI +A+ + +L+A++
Sbjct: 112 GNYVVQYVLDLNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAEL 171
Query: 435 V--ANAYVLSEHSYGNYVVQYILGLKIP 460
V + +L S+ NYVVQ L P
Sbjct: 172 VDPSRLELLLRDSFANYVVQTCLDYAEP 199
>gi|149239210|ref|XP_001525481.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450974|gb|EDK45230.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1163
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 33/325 (10%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIE-------MILSEVIDDLHELMRHQSA 292
+ +L+ +I+ +AKD+ GCRFLQKK+DE ++ + +I E+ ++EL+
Sbjct: 355 LNQLKPQILKLAKDQYGCRFLQKKIDENLILNYQARLNNFTIIFDEIHSHMYELIIDPFG 414
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L+QK+I N+ + +IL + Q L +I + G+R +QK++D+ T
Sbjct: 415 NYLVQKMIAYCNQSNL-DMILDTL--QFNLFKISVNQHGTRALQKIIDSLS-------TS 464
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q ++L+ LK + L K +GNHVI++ L K+ P + + + I E+ +AT + GC
Sbjct: 465 AQLNVLIRGLKPHIIDLIKDLNGNHVIQKILNKYEPADCQFIYDSIIEDLYIVATHKHGC 524
Query: 413 CLLQYCIPLAQEEQKARLIADVVA--NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ Q + ++ N VL +GNYV+QY++ + +V+ V+
Sbjct: 525 CVLQKCLNHVTPAQLNQFSLAILQYDNFKVLINDQFGNYVLQYLISINSLEVSFQVLQNF 584
Query: 471 AGRYFALSL--GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLIL--------DPY 520
+Y ++L K SSNVV+K L +S + ++ I ++++ DP+
Sbjct: 585 H-QYGIMNLCNSKFSSNVVEKYLKNCYNNESVNVAFANLKFDLIYRILIDDLNTLINDPF 643
Query: 521 GNYVIQTAWDVSQGRRIRQTLYDLV 545
GNYVIQT D R+ YD V
Sbjct: 644 GNYVIQTLIDFLVNPRVN---YDNV 665
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 721 LRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQKF 780
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 781 FEFGSLDQKLALANRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 829
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 830 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 889
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 890 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 949
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 950 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1009
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1010 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1039
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 720 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 779
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 780 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 828
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 829 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 888
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 889 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 948
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 949 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1008
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1009 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1038
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 832
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 833 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 892
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 893 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 952
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 953 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1012
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1013 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 719 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 778
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 779 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 827
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 828 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 887
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 888 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 947
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 948 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1007
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1008 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1037
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 720 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 779
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 780 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 828
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 829 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 888
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 889 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 948
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 949 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1008
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1009 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1038
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 723 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 782
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 783 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 831
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 832 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 891
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 892 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 951
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 952 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1011
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1012 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1041
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 667 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 726
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 727 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 775
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 776 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 835
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 836 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 895
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 896 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEP 955
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 956 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 985
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 260 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 319
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 320 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 368
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 369 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 428
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 429 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 488
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 489 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 548
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 549 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 578
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 723 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 782
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 783 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 831
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 832 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 891
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 892 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 951
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 952 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1011
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1012 AQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 1041
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 619 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 678
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 679 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 727
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 728 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 787
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 788 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 847
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYVIQ D+++
Sbjct: 848 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEP 907
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 908 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 937
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 723 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 782
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 783 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 831
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 832 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 891
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 892 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 951
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 952 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1011
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1012 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1041
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 667 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 726
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 727 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 775
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 776 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 835
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 836 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 895
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 896 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 955
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 956 AQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 985
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 832
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 833 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 892
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 893 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 952
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 953 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1012
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1013 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 178/329 (54%), Gaps = 14/329 (4%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++ +L I+ ++D+ G RF+Q+K++ + +M+ +E++ + LM N++IQK
Sbjct: 254 TLRDLSRHIVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYVIQK 313
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
EQ K ILS + LL + + G RV+QK L++ LT EQQ +
Sbjct: 314 FFEFGTPEQ--KAILSQIVRGHVLL-LALQMYGCRVIQKALES--------LTSEQQQEI 362
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L + K +GNHV+++C+++ P + ++ ++ L+T GC ++Q
Sbjct: 363 VRELDGHVLKCVKDQNGNHVVQKCIERVDPHALQFIINALSGQVFALSTHPYGCRVIQRI 422
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ EQ A ++ ++ ++A L + +GNYV+Q++L P+ + ++ + G+ ALS
Sbjct: 423 LEHCTPEQVAPILEELHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALS 482
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-IVQLIL-DPYGNYVIQTAWDVSQGRR 536
K +SNVV+KC+ + + + +I E+ + + +QL++ D Y NYV+Q DV + +
Sbjct: 483 QHKFASNVVEKCVTHATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQKMIDVCEPTQ 542
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 543 -RKILMHKIRGHISALRKYTYGKHIIAKL 570
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 381 RCLQKFPPD-YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAY 439
R L+ F + Y L +++ + ++ + D+ G +Q + A +K + +++ +AY
Sbjct: 240 RFLEDFRNNRYPSLTLRDLSRHIVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAY 299
Query: 440 VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
L +GNYV+Q P+ A + + G L+L V+QK L EQ
Sbjct: 300 NLMTDVFGNYVIQKFFEFGTPEQKAILSQIVRGHVLLLALQMYGCRVIQKALESLTSEQQ 359
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
I+ E+ H +++ + D GN+V+Q + + Q + + + L +H YG
Sbjct: 360 QEIVRELDGH--VLKCVKDQNGNHVVQKCIERVDPHAL-QFIINALSGQVFALSTHPYGC 416
Query: 560 NVLAKV 565
V+ ++
Sbjct: 417 RVIQRI 422
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L V S+ HG+ I++ L++ + + + EI + +L TD G ++
Sbjct: 252 SLTLRDLSRHIVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYVI 311
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQKA L V + +L+ YG V+Q L + ++V +L G
Sbjct: 312 QKFFEFGTPEQKAILSQIVRGHVLLLALQMYGCRVIQKALESLTSEQQQEIVRELDGHVL 371
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+ ++VVQKC+ IIN + ++ L PYG VIQ
Sbjct: 372 KCVKDQNGNHVVQKCIERVDPHALQFIINAL--SGQVFALSTHPYGCRVIQ 420
>gi|6056191|gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
Length = 1031
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 175/339 (51%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + E+ G +I + D+ G RF+Q+K++ + I E++ LM
Sbjct: 654 NNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVF 713
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK +Q +L V +L + + G RV+QK L+ E
Sbjct: 714 GNYVIQKFFEHGTTKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVEL------- 763
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
EQQ+ +V L + +GNHVI++C+++ P D+ + ++ L L+T G
Sbjct: 764 -EQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYG 822
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + + R+I + + ++ L++ YGNYV+Q+I+ P ++++ +L
Sbjct: 823 CRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKL 882
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQ 526
AG+ +S K +SNVV+KCL G E+ ++NE++ + + + ++ DP+GNYV+Q
Sbjct: 883 AGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQ 942
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + L + V + L+ + YGK+++A+V
Sbjct: 943 KVLETCDDQSLALILSRIKVHLNA-LKRYTYGKHIVARV 980
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 645 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 704
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 705 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 753
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 754 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 813
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 814 EHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 873
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYVIQ D+++
Sbjct: 874 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEP 933
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 934 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 963
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 832
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 833 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 892
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 893 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 952
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 953 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1012
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1013 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 726 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 785
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 786 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 834
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 835 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 894
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 895 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 954
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 955 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1014
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1015 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1044
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 742 LRDLLGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKF 801
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 802 FEFGNLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 850
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 851 KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRIL 910
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P + +VA++ G+ ALS
Sbjct: 911 EHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQ 970
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 971 HKFASNVVEKCVSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1030
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++L K+
Sbjct: 1031 AQ-RKVLMHKIRPHVTTLRKYTYGKHILVKL 1060
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 669 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 728
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 729 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 777
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 778 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 837
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 838 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 897
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 898 HKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEP 957
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 958 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 987
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 723 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 782
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 783 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 831
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 832 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 891
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 892 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 951
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 952 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1011
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1012 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1041
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 644 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 703
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 704 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 752
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 753 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 812
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 813 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 872
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 873 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 932
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 933 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 962
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1013
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1014 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1043
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 644 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 703
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 704 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 752
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 753 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 812
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 813 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 872
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 873 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEP 932
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 933 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 962
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 11/298 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E ++G++ +A ++G RFLQK+V + N + L+E+ L +LM N+ Q L
Sbjct: 695 LEIIKGQVHKLALTQKGSRFLQKQVTKANSGIVAYFLNEISPHLCDLMIDNYGNYFCQSL 754
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + EQ ++ ++ Q + + IC D G+ +Q + + P E++ +
Sbjct: 755 LSSCSGEQRLSILRAI---QPKFIEICCDRKGTHTIQTMFELVNLP-------EEEDFIR 804
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
AL + LSK P G HV+++ + FP + EE+ + ++LA + +G C+++ +
Sbjct: 805 DALMGNVIRLSKDPQGTHVVQKVMASFPEHKRAFIYEEVFDQFIELAKNNNGLCVVKKLV 864
Query: 420 PLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +Q L+ + NA L + +GNY V I+ P+V + L R LS
Sbjct: 865 QFTKNTDQAVILMKRLQENAIDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLS 924
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
K SSNV++KCL + E+ G+I E+ + LI + YGNYV+Q A +S G+
Sbjct: 925 SQKFSSNVIEKCLERADEQMRAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLSLGQE 982
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 38/315 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ I+ +AKD+ GCRFLQKK+DE + E+I +++ ++EL+
Sbjct: 282 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEVIFNQIYSYVYELIVDPFG 341
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKLI NE + L++ ++ Q L +I + G+R +QK++D+
Sbjct: 342 NYLIQKLIVYCNESNL-DLLMEIL--QYNLFQISINQHGTRALQKIIDSLN-------NS 391
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q LL+ LK + L K +GNHVI++ L K+ P + + + I ++ +AT + GC
Sbjct: 392 HQLGLLIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGC 451
Query: 413 CLLQYC---IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
C+LQ C + L Q + +R I N +L +GNYV+QY++ + + D+ Q
Sbjct: 452 CVLQKCLNHVTLQQLGEFSRAILK-FENFKLLINDQFGNYVLQYLISIN----SLDINFQ 506
Query: 470 LAGRYFALSLG-----KCSSNVVQKCLLESGEEQSTGI--------INEIIRHPEIVQLI 516
+ + + K SSNVV+K L +S + + II ++ LI
Sbjct: 507 IFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLI 566
Query: 517 LDPYGNYVIQTAWDV 531
DPYGNYVIQT D+
Sbjct: 567 NDPYGNYVIQTMIDI 581
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 381 RCLQKFPPDYTKDL----LEEIAENCLDLATDRSGCCLLQ----------YCIPLAQEEQ 426
R QK +Y + L ++ L LA D+ GC LQ Y + LA E
Sbjct: 264 RFPQKIDKEYLASINKLPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFE- 322
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSN 485
+ + + Y L +GNY++Q ++ + + D++ + L F +S+ + +
Sbjct: 323 --VIFNQIYSYVYELIVDPFGNYLIQKLI-VYCNESNLDLLMEILQYNLFQISINQHGTR 379
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
+QK + G++ + ++ P I++LI D GN+VIQ + + Q +YD +
Sbjct: 380 ALQKIIDSLNNSHQLGLLIKGLK-PYIIELIKDLNGNHVIQKILNKYEPPDC-QFIYDSI 437
Query: 546 VDNSPFLQSHMYGKNVLAK 564
+D+ + +H +G VL K
Sbjct: 438 IDDLYIVATHKHGCCVLQK 456
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 667 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 726
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 727 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 775
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 776 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 835
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 836 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 895
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 896 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 955
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 956 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 985
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 664 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 723
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 724 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 772
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 773 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 832
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 833 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 892
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 893 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 952
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 953 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 982
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 669 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 728
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 729 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 777
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 778 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 837
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 838 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 897
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 898 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 957
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 958 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 987
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 670 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 729
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 730 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 778
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 779 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 838
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 839 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 898
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 899 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 958
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 959 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 988
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 644 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 703
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 704 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 752
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 753 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 812
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 813 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 872
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 873 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 932
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 933 AQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 962
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 668 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 727
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 728 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 776
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 777 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 836
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 837 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 896
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 897 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 956
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 957 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 986
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 669 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 728
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 729 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 777
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 778 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 837
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 838 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 897
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 898 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 957
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 958 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 987
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 662 LRDLLGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKF 721
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 722 FEFGNLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 770
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 771 KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRIL 830
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P + +VA++ G+ ALS
Sbjct: 831 EHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQ 890
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 891 HKFASNVVEKCVSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 950
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++L K+
Sbjct: 951 AQ-RKVLMHKIRPHVTTLRKYTYGKHILVKL 980
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 669 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 728
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 729 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 777
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 778 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 837
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 838 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 897
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 898 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 957
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 958 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 987
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 646 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 705
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 706 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 754
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 755 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 814
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 815 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 874
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 875 HKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEP 934
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 935 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 964
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 647 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 706
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 707 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 755
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 756 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 815
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 816 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 875
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 876 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 935
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 936 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 965
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 644 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 703
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 704 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 752
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 753 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 812
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 813 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 872
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 873 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 932
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 933 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 962
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 641 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 700
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 701 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 749
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 750 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 809
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 810 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 869
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 870 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 929
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 930 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 959
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 536 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 596 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 645 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 705 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 764
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 765 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 824
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 825 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 854
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 646 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 705
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 706 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 754
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 755 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 814
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 815 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 874
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 875 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 934
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 935 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 964
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 645 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 704
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 705 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 753
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 754 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 813
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 814 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 873
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 874 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 933
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 934 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 963
>gi|297833816|ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 175/339 (51%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + E+ G +I + D+ G RF+Q+K++ + I E++ LM
Sbjct: 656 NNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVF 715
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK +Q +L V +L + + G RV+QK L+ E
Sbjct: 716 GNYVIQKFFEHGTNKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVEL------- 765
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
EQQ+ +V L + +GNHVI++C+++ P D+ + ++ L L+T G
Sbjct: 766 -EQQARIVQELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYG 824
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + + R+I + + ++ L++ YGNYV+Q+I+ P ++++ +L
Sbjct: 825 CRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKL 884
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQ 526
AG+ +S K +SNVV+KCL G E+ ++NE++ + + + ++ DP+GNYV+Q
Sbjct: 885 AGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQ 944
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + L + V + L+ + YGK+++A+V
Sbjct: 945 KVLETCNDQSLALILSRIKVHLNA-LKRYTYGKHIVARV 982
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 124/227 (54%), Gaps = 12/227 (5%)
Query: 325 ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI------------TVSLSKS 372
IC D +G R +QK L+ + R+ + + V + + +L K
Sbjct: 243 ICKDQNGCRYLQKKLEETDLQQREVIFNQVYPHFVELMTGKYLQNNLDEQVRSSFTLIKD 302
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++CL +F + + + + ++ENC+++AT R GCC+LQ CI + Q +L+
Sbjct: 303 INGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANNQTKQLVD 362
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
+++ +A L + YGNYVVQY+L L Q + ++ Q G LS K SSNV++KC+
Sbjct: 363 EIINHALTLVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSSNVMEKCIR 422
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
+ E+ ++ E++ + +L+ D Y NYV+QTA D + + RQ
Sbjct: 423 VAEEDTRHDLVQEMMNKDRLEKLLKDSYANYVVQTALDYASESQHRQ 469
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 36/314 (11%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPI--------DIEMILSEVIDDLHELMRHQSAN 293
+L+ I+ ++KD+ GCRFLQKK+DE N I + E+I +++ L+EL+ N
Sbjct: 131 QLKSDILRLSKDQYGCRFLQKKIDE-NLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFGN 189
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKLI NE + LIL ++ Q L +I + G+R +QK++D Q
Sbjct: 190 YLIQKLIVYCNESNLN-LILQIL--QYNLFQISINQHGTRALQKIIDNLN-------NQY 239
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +LL+ +K + L K +GNHVI++ L K+PP + + + I E +A+ + GCC
Sbjct: 240 QLNLLIKGMKPYIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCC 299
Query: 414 LLQYC---IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ- 469
+LQ C + + Q ++ + I D AN +L +GNYV+QY++ + ++ +
Sbjct: 300 VLQKCLNHVTMTQLQEFSACILD-FANFQLLINDQFGNYVLQYLISINSFEINYKIFQNF 358
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI------------IRHPEIVQLIL 517
L L K SSNVV+K L ++ + + I ++ +LI
Sbjct: 359 LQFGINNLCNLKFSSNVVEKFLKNCYNNEAYNGVTAVNFSNLKMELIYNILINDLNKLIN 418
Query: 518 DPYGNYVIQTAWDV 531
DPYGNYVIQT D+
Sbjct: 419 DPYGNYVIQTLIDI 432
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
Query: 315 VVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPH 374
+V + +LR+ D G R +QK +D P Q + ++ + + L P
Sbjct: 129 LVQLKSDILRLSKDQYGCRFLQKKIDENLIPNYQTRLNNFE-VIFAQIHPYLYELIIDPF 187
Query: 375 GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP-LAQEEQKARLIAD 433
GN++I++ + +L+ + N ++ ++ G LQ I L + Q LI
Sbjct: 188 GNYLIQKLIVYCNESNLNLILQILQYNLFQISINQHGTRALQKIIDNLNNQYQLNLLIKG 247
Query: 434 VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLE 493
+ L + GN+V+Q IL P + + + ++ K V+QKCL
Sbjct: 248 MKPYIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCLNH 307
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ---GRRIRQTLYDLVVDNSP 550
Q I+ LI D +GNYV+Q ++ +I Q ++N
Sbjct: 308 VTMTQLQEFSACILDFANFQLLINDQFGNYVLQYLISINSFEINYKIFQNFLQFGINN-- 365
Query: 551 FLQSHMYGKNVLAKVRGN 568
L + + NV+ K N
Sbjct: 366 -LCNLKFSSNVVEKFLKN 382
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ ++ II + KD G +QK +++ P D + I +I+ L+ + H+ ++QK
Sbjct: 245 IKGMKPYIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKC 304
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + Q+ + ++ L I D G+ V+Q L+ + ++ Q +
Sbjct: 305 LNHVTMTQLQEFSACILDFANFQLLINDQF-GNYVLQYLISINSFEINYKIFQNFLQFGI 363
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L N+ ++ +++E+ +NC + +G + +
Sbjct: 364 NNLCNL-----------------------KFSSNVVEKFLKNCYN-NEAYNGVTAVNF-- 397
Query: 420 PLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQ 461
K LI +++ N L YGNYV+Q ++ + I Q
Sbjct: 398 ----SNLKMELIYNILINDLNKLINDPYGNYVIQTLIDILINQ 436
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 175/339 (51%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + E+ G +I + D+ G RF+Q+K++ + I E++ LM
Sbjct: 654 NNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVF 713
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK +Q +L V +L + + G RV+QK L+ E
Sbjct: 714 GNYVIQKFFEHGTTKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVEL------- 763
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
EQQ+ +V L + +GNHVI++C+++ P D+ + ++ L L+T G
Sbjct: 764 -EQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYG 822
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + + R+I + + ++ L++ YGNYV+Q+I+ P ++++ +L
Sbjct: 823 CRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKL 882
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQ 526
AG+ +S K +SNVV+KCL G E+ ++NE++ + + + ++ DP+GNYV+Q
Sbjct: 883 AGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQ 942
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + L + V + L+ + YGK+++A+V
Sbjct: 943 KVLETCDDQSLALILSRIKVHLNA-LKRYTYGKHIVARV 980
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 13/349 (3%)
Query: 222 NNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID 281
N+ ++ H S + +L ++ ++D+ G RF+Q+K++ P + +M+ +E++
Sbjct: 372 NHIVEFSQDQHGSRSSLQLRDLANHVVEFSQDQHGSRFIQQKLERATPAEKQMVFNEILS 431
Query: 282 DLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA 341
++LM N++IQK EQ L + + +L + + G RV+QK L+
Sbjct: 432 AAYQLMTDVFGNYVIQKFFEFGTPEQKNALAQKI---RGHVLPLALQMYGCRVIQKALEC 488
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
L Q LV L + K +GNHV+++C++ P + +++
Sbjct: 489 ----IPPDLKFSYQVELVKELDGHVLKCVKDQNGNHVVQKCIECVDPSELQFIIDAFRGQ 544
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
L+T GC ++Q + EQ ++ ++ N L + YGNYV+Q++L P+
Sbjct: 545 VFALSTHPYGCRVIQRILEHCTVEQTIPILEELHENTERLVQDQYGNYVIQHVLEHGRPE 604
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLI 516
+ +V +L G+ ALS K +SNVV+KC+ S + +I+E+ H + ++
Sbjct: 605 DKSKIVNELRGKVLALSQHKFASNVVEKCVSHSSRAERAMLIDEVCSYCDGTHSALYTMM 664
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
D + NYV+Q DV++ ++ R+ L + + L+ + YGK++LAK+
Sbjct: 665 KDQFANYVVQKMIDVAEPQQ-RKILMHKIRPHIATLRKYTYGKHILAKL 712
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 721 LRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 780
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 781 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 829
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 830 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 889
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 890 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 949
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 950 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1009
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1010 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1039
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ SE++ ++LM N++IQK
Sbjct: 840 LRDLVGHIVEFSRDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKF 899
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 900 FEFGSIDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 948
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 949 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 1008
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V ++ G+ LS
Sbjct: 1009 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQ 1068
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 1069 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1128
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1129 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1158
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 721 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 780
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 781 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 829
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 830 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 889
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 890 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 949
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 950 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1009
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1010 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1039
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 721 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 780
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 781 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 829
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 830 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 889
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 890 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 949
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 950 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1009
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1010 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1039
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 722 LRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 781
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 782 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 830
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 831 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 890
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 891 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 950
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 951 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1010
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1011 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1040
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 179/336 (53%), Gaps = 16/336 (4%)
Query: 234 RTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
R S+E ++ G + V+ D+ G RF+Q+K++ +P D E I E++ ++ L
Sbjct: 407 RNGADSVELIDVVGHVKEVSMDQYGSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVF 466
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q+ +L + + R+L + + G RV+QK+L+ +
Sbjct: 467 GNYVIQKFFEFATESQLIQLADQL---KGRILELSLQMYGCRVVQKVLEV--------VG 515
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+Q+ +V LKN + +GNHVI++C++ P D +++ I L L T + G
Sbjct: 516 MDQKVDIVHELKNYILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYG 575
Query: 412 CCLLQYCIPLAQEE-QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + ++ ++ +++ + L++ +GNYVVQ++L P+ + ++ +L
Sbjct: 576 CRVIQRVLEHCHDPVTQSAIMNEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKL 635
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAW 529
+G+ LS K +SNV++KCL E+ +I EII + Q L+ D +GNYV+Q
Sbjct: 636 SGQVVTLSKQKFASNVIEKCLEFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL 695
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + + L + + + L+++ YGK+++A+V
Sbjct: 696 ETCDDKYLEMILSSIKLHLNE-LKNYTYGKHIVARV 730
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 129/274 (47%), Gaps = 51/274 (18%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMI-LSEVIDDLHELMRH-------QSA 292
++L+GRI+ ++ GCR +QK +E++ + + +D +HEL + Q+
Sbjct: 488 DQLKGRILELSLQMYGCRVVQKV--------LEVVGMDQKVDIVHELKNYILKCIGDQNG 539
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ---- 348
NH+IQK I + E+++ +I ++S ++L +C G RV+Q++L+ P Q
Sbjct: 540 NHVIQKCIECVPEDRIPFVIDPILS---QILVLCTHQYGCRVIQRVLEHCHDPVTQSAIM 596
Query: 349 --------QLTQ-----------------EQQSLLVSALKNITVSLSKSPHGNHVIKRCL 383
LT E++S+++ L V+LSK ++VI++CL
Sbjct: 597 NEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFASNVIEKCL 656
Query: 384 QKFPPDYTKDLLEEI---AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV 440
+ P+ L+ EI + +L D+ G ++Q + ++ +++ + +
Sbjct: 657 EFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLETCDDKYLEMILSSIKLHLNE 716
Query: 441 LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
L ++YG ++V + L + +A ++G++
Sbjct: 717 LKNYTYGKHIVARVEKLIVTGENRARMASMSGQH 750
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 832
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 833 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 892
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 893 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 952
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 953 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1012
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1013 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1042
>gi|357449403|ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
gi|355484026|gb|AES65229.1| Pumilio-like protein [Medicago truncatula]
Length = 984
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 172/332 (51%), Gaps = 19/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + ++ EV+ +LM N++IQK
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N EQ +L + ++L + + G RV+QK L+ E+ EQ++ LV
Sbjct: 714 FEYGNPEQRKELAEKLAG---QILPLSLQMYGCRVIQKALEVIEH--------EQKAQLV 762
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P + +L +L+ GC ++Q +
Sbjct: 763 RELDGNIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRIL 822
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E + + I D ++ + L++ YGNYV Q++L PQ + ++++L+G LS
Sbjct: 823 EHCTDEVQCQFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLS 882
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDV-SQ 533
K +SNVV+KCL + +I EII H E ++ ++ D + NYVIQ D+ S+
Sbjct: 883 QHKFASNVVEKCLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSE 942
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+R R L + ++ L+ + YGK+++A++
Sbjct: 943 NQRAR--LLSHIRAHANALKKYTYGKHIVARM 972
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 645 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 704
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 705 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 753
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 754 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 813
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 814 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 873
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 874 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 933
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 934 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 963
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 640 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 699
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 700 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 748
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 749 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 808
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 809 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 868
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 869 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 928
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 929 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 958
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 629 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 688
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 689 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 737
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 738 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 797
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 798 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 857
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 858 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 917
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 918 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 947
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 194 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 253
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 254 FEFGSLDQKLALATRI---RGHVLPLALQMYGYRVIQKALES--------ISSDQQSEMV 302
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 303 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 362
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 363 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 422
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 423 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 482
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 483 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 512
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 163/296 (55%), Gaps = 14/296 (4%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
+S+EE+ G+I + K + GCRFLQKK++E+ + + +I EV + L ELM +LI
Sbjct: 323 TSLEEITGQIYHLTKYQAGCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLI 382
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+L+ + Q K+I+ ++ + C + G +QK+L Q L+ EQ
Sbjct: 383 PQLMKYCDNNQ-RKMIVDRIAPKVETFA-CH-IYGIHGIQKVL--------QFLSPEQVD 431
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+++++ + +SLSK GN++I+ L+ F P+ + + + I +N +++ T + GC ++
Sbjct: 432 TIIASISDKVISLSKDAKGNYLIQSFLKTFSPETNQFICDAIMKNVIEICTHKVGCTVVN 491
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
I A + Q +LI + +A L + +GNYVVQ++L T ++ + G
Sbjct: 492 RAIDCANKVQLEKLIDSITNHALQLVQDQFGNYVVQHLLTNNKAYATK-LIKSVIGNIAE 550
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS+ K SSNV++KCL + E I+ E+ +I+ L+ D Y N+VIQTA DV+
Sbjct: 551 LSVQKFSSNVIEKCLQVANTETYESIVKELTE-VDILTLLQDKYANFVIQTALDVA 605
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 169/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ P + +M+ +E++ + LM N++IQK
Sbjct: 304 LRDLVNHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKF 363
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+Q L V + +L + + G RV+QK L++ + +QQ +V
Sbjct: 364 FEFGTPDQKMALAQRV---RGHVLPLALQMYGCRVIQKALES--------IPPDQQVDIV 412
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 413 KELDGHVLKCVKDQNGNHVVQKCIECVEPVALQFIIDAFRGQIFVLSTHPYGCRVIQRIL 472
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+Q ++ ++ N L + YGNYV+Q++L P+ + +VA+L G+ LS
Sbjct: 473 EHCTVDQTIPILEELHDNTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQ 532
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+I H + ++ D Y NYV+Q DVS+
Sbjct: 533 HKFASNVVEKCVTHASRPERALLIDEVISYNDGPHSALYTMMKDQYANYVVQKMIDVSEP 592
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ YGK++LAK+
Sbjct: 593 GQ-RRILMQKIRPHIATLRKFTYGKHILAKL 622
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 174/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 646 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 705
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ + QS +V
Sbjct: 706 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDMQSEMV 754
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 755 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 814
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 815 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 874
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 875 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 934
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 935 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 964
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 17/311 (5%)
Query: 258 RFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVS 317
R LQ +D+ ++++ E+ + + LM +Q N+L QK++ + +++Q +L++ V
Sbjct: 12 RHLQLALDQEGTSLVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQRRQLLVMV-- 69
Query: 318 SQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNH 377
Q +L D+ G+R +QKL+ P + + ++ L V L +GNH
Sbjct: 70 -QSQLREASKDVHGTRCVQKLIHLCRLP-------DMVNRILDGLCPFVVELCADVNGNH 121
Query: 378 VIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVAN 437
VIK CL+ + + LL+E+ ++C++++ + GC ++Q CI +A E RL + A+
Sbjct: 122 VIKCCLKSMAAELRQRLLDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAH 181
Query: 438 AYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEE 497
A L Y NYV+QY++ P + + LS KCSSNVV+K L E
Sbjct: 182 ALDLMRDRYANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEA 241
Query: 498 QSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS---QGRRIRQTLYDLVVDNSPFLQS 554
IINEI+ ++ ++LDPY NYVIQ A +S Q R++Q + D L
Sbjct: 242 TRDSIINEIVNASDLRSMLLDPYANYVIQKALVLSNADQRGRLKQAIEPYAKD----LAD 297
Query: 555 HMYGKNVLAKV 565
GK++L+K+
Sbjct: 298 SKTGKHILSKL 308
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++E+ I ++K+ GC +QK ++ + + + + +LMR + AN++IQ L
Sbjct: 139 LDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAHALDLMRDRYANYVIQYL 198
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I + + V++ + L + + S V++K L+ G+ TR + E +
Sbjct: 199 IENARPSESLRFCRCVLTHVEELSK---EKCSSNVVEKSLNRGDEATRDSIINEIVN--A 253
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
S L+++ + P+ N+VI++ L D L + I DLA ++G
Sbjct: 254 SDLRSMLL----DPYANYVIQKALVLSNADQRGRLKQAIEPYAKDLADSKTG 301
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 175/335 (52%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ +P + +++ +E++ ++LM N++IQK
Sbjct: 234 LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFNEILQAAYQLMVDVIGNYVIQKF 293
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 294 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 344
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 345 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRIL 404
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 405 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 460
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 461 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 520
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 521 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 554
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 173/329 (52%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +M+ +E++ + LM N++IQK
Sbjct: 758 LRDLANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKF 817
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 818 FEFGTAEQKTTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IPPEQQQEIV 866
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P+ + +++ + L+T GC ++Q +
Sbjct: 867 RELDGHVLKCVKDQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRIL 926
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++A++ + L + +GNYV+Q++L P+ + +++ + G+ ALS
Sbjct: 927 EHCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQ 986
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + + ++ D Y NYV+Q DVS+ +
Sbjct: 987 HKFASNVVEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQ- 1045
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++AK+
Sbjct: 1046 RKVLMHKIRPHLNSLRKYTYGKHIIAKLE 1074
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI +L TD G ++Q
Sbjct: 761 LANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEF 820
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 821 GTAEQKTTLAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQ 880
Query: 482 CSSNVVQKCL-------LE------SGE-----------------------EQSTGIINE 505
++VVQKC+ L+ SG+ EQ+ I+ E
Sbjct: 881 NGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAE 940
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +H + QLI D +GNYVIQ + + Q L V L H + NV+ K
Sbjct: 941 LHQHTD--QLIQDQFGNYVIQHVLEHGKPEDKSQ-LISSVRGKVLALSQHKFASNVVEKC 997
Query: 566 RGNKNR 571
+ R
Sbjct: 998 VTHATR 1003
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 841 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 900
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ EQQS +V
Sbjct: 901 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSEQQSDIV 949
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 950 RELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRIL 1009
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ ++ ++ ++ L + YGNYV+Q++L P+ + +VA++ G+ LS
Sbjct: 1010 EHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQ 1069
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K + + +KC++ S + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 1070 HKFARTLWEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEP 1129
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1130 AQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1159
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 742 LRDLMGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKF 801
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 802 FEFGNLDQKLSLTTRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNDMV 850
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 851 KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRIL 910
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P + +V+++ G+ LS
Sbjct: 911 EHCTVEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQ 970
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+EI H + ++ D Y NYV+Q D+++
Sbjct: 971 HKFASNVVEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1030
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++L K+
Sbjct: 1031 GQ-RKVLMHKIRPHVTTLRKYTYGKHILVKL 1060
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 168/331 (50%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +++ SE++ + LM N++IQK
Sbjct: 794 LRDLANHIVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKF 853
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L L V + +L + + G RV+QK L++ ++ +QQ +V
Sbjct: 854 FEFGSAEQKQALALKV---KGHVLPLALQMYGCRVIQKALES--------ISPDQQKEVV 902
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 903 KELDGHVLKCVKDQNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRIL 962
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYVVQ++L P+ +VA + GR LS
Sbjct: 963 EHCTGEQTGPVLEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQ 1022
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I E+ H + ++ D Y NYV+Q +V++
Sbjct: 1023 HKFASNVVEKCVTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEP 1082
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + P L+ + YGK++LAK+
Sbjct: 1083 PQ-RKLLLHKIRPHVPSLRKYTYGKHILAKL 1112
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 49/251 (19%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI +L TD G ++Q
Sbjct: 797 LANHIVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEF 856
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P +VV +L G +
Sbjct: 857 GSAEQKQALALKVKGHVLPLALQMYGCRVIQKALESISPDQQKEVVKELDGHVLKCVKDQ 916
Query: 482 CSSNVVQKC-----------------------------------LLESGEEQSTG-IINE 505
++VVQKC +LE + TG ++ E
Sbjct: 917 NGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPVLEE 976
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGR-----RIRQTLYDLVVDNSPFLQSHMYGKN 560
+ +H E QL+ D YGNYV+Q + GR RI + V+ L H + N
Sbjct: 977 LHQHTE--QLVQDQYGNYVVQHVLE--HGRPEDKGRIVAAVRGRVLP----LSQHKFASN 1028
Query: 561 VLAKVRGNKNR 571
V+ K + +R
Sbjct: 1029 VVEKCVTHASR 1039
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 662 LRDLMGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKF 721
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 722 FEFGNLDQKLSLTTRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNDMV 770
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 771 KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRIL 830
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P + +V+++ G+ LS
Sbjct: 831 EHCTVEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQ 890
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+EI H + ++ D Y NYV+Q D+++
Sbjct: 891 HKFASNVVEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 950
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++L K+
Sbjct: 951 GQ-RKVLMHKIRPHVTTLRKYTYGKHILVKL 980
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 173/328 (52%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +M+ +E++ + LM N++IQK
Sbjct: 374 LRDLANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKF 433
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 434 FEFGTAEQKTTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IPPEQQQEIV 482
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P+ + +++ + L+T GC ++Q +
Sbjct: 483 RELDGHVLKCVKDQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRIL 542
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++A++ + L + +GNYV+Q++L P+ + +++ + G+ ALS
Sbjct: 543 EHCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQ 602
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + + ++ D Y NYV+Q DVS+ +
Sbjct: 603 HKFASNVVEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQ- 661
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 662 RKVLMHKIRPHLNSLRKYTYGKHIIAKL 689
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI +L TD G ++Q
Sbjct: 377 LANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEF 436
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 437 GTAEQKTTLAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQ 496
Query: 482 CSSNVVQKCL-------LE------SGE-----------------------EQSTGIINE 505
++VVQKC+ L+ SG+ EQ+ I+ E
Sbjct: 497 NGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAE 556
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +H + QLI D +GNYVIQ + + Q L V L H + NV+ K
Sbjct: 557 LHQHTD--QLIQDQFGNYVIQHVLEHGKPEDKSQ-LISSVRGKVLALSQHKFASNVVEKC 613
Query: 566 RGNKNR 571
+ R
Sbjct: 614 VTHATR 619
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 175/334 (52%), Gaps = 19/334 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++G I +KD+ G R +Q+K++ + + +++ EV+ +H LM N+++QK
Sbjct: 467 LSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKF 526
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ K IL+ S +L + + G RV+QK +++ E ++Q LL+
Sbjct: 527 FEHGTTEQ--KRILADKLSG-HILSLTLQMYGCRVIQKAIESIEL--------DKQILLI 575
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L V +GNHVI++C++K P + +++ + LAT GC ++Q +
Sbjct: 576 GELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRIL 635
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E+Q A ++ +++ A L + YGNYV+Q++L P+ + +V +L G+ + LS
Sbjct: 636 EHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQ 695
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-------IVQLILDPYGNYVIQTAWDVS 532
K +SNV++KC+ + IINEI+ +++++ DPY NYVIQ D+
Sbjct: 696 HKFASNVIEKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIV 755
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R + + + P L+ GK++++++
Sbjct: 756 EPAQ-RDMIINRIQPFVPTLKKVTPGKHIISRIE 788
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 341 AGEYPTRQQLTQE----QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
EY TR QL ++ + L +S +K SK G+ +I++ ++ + + + +
Sbjct: 445 TNEYTTRSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFD 504
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV-LSEHSYGNYVVQYIL 455
E+ L TD G +LQ EQK R++AD ++ + L+ YG V+Q
Sbjct: 505 EVVVAVHSLMTDVFGNYVLQKFFEHGTTEQK-RILADKLSGHILSLTLQMYGCRVIQK-- 561
Query: 456 GLKIPQVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--H 509
I + D ++ +L G + ++V+QKC+ E+ T +I II H
Sbjct: 562 --AIESIELDKQILLIGELNGHIVQCVTDQNGNHVIQKCI----EKIPTHLIQFIIDSFH 615
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
I QL PYG VIQ + +++ L +L+ +Q YG V+ V N
Sbjct: 616 GHIYQLATHPYGCRVIQRILEHCAEKQVAPILDELMRCAVSLVQDQ-YGNYVIQHVLEN 673
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 170/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ ++ +++ +E++ + LM N++IQK
Sbjct: 931 LRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKF 990
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 991 FEFGSPEQKQALAQQV---KGHVLPLALQMYGCRVIQKALES--------IPAEQQQEIV 1039
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 1040 RELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRIL 1099
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++A++ AN L + YGNYV+Q++L P+ + ++A + G+ LS
Sbjct: 1100 EHCTPEQTAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQ 1159
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI--IRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + ++ D Y NYV+Q DVS+ +
Sbjct: 1160 HKFASNVVEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQ- 1218
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 1219 RKVLLHKIRPHMNSLKKYTYGKHIIAKL 1246
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 129/219 (58%), Gaps = 9/219 (4%)
Query: 329 LSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP 388
+ G+R +QK++ EY + T EQ ++++AL + V+L K +GNHVI++CL K
Sbjct: 1 MHGTRAVQKMI---EYLS----TPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSN 53
Query: 389 DYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGN 448
D + + + I NC+++AT R GCC+LQ CI A + QK ++ ++ +A L + +GN
Sbjct: 54 DDIQFIFDAICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGN 113
Query: 449 YVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR 508
YVVQYIL L + + ++ + G LS+ K SSNV++KC+ + + +I E+ +
Sbjct: 114 YVVQYILDLGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEELPK 173
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+I LI D Y NYVIQT+ D + + +Q + D V+
Sbjct: 174 --KIGSLIRDSYANYVIQTSLDYADSTQRKQLMKDKQVE 210
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 256 GCRFLQKKVDE-RNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILS 314
G R +QK ++ P I+++++ + + L++ + NH+IQK + L+ + + + +
Sbjct: 3 GTRAVQKMIEYLSTPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFDA 62
Query: 315 VVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPH 374
+ S+ + + G V+Q+ +D + Q+ +E + N ++L + P
Sbjct: 63 ICSN---CIEVATHRHGCCVLQRCIDHASDSQKVQIAKE--------ITNHALNLVQDPF 111
Query: 375 GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADV 434
GN+V++ L +++ L+ N L+ + +++ CI +A+ ++ LI ++
Sbjct: 112 GNYVVQYILDLGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEEL 171
Query: 435 VANAYVLSEHSYGNYVVQYIL 455
L SY NYV+Q L
Sbjct: 172 PKKIGSLIRDSYANYVIQTSL 192
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I L ++ + KD G +QK +++ + DI+ I + + E+ H+ ++Q+
Sbjct: 24 INALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFDAICSNCIEVATHRHGCCVLQRC 83
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I ++ Q ++ + + L + D G+ V+Q +LD G+ + + L+
Sbjct: 84 IDHASDSQKVQIAKEITN---HALNLVQDPFGNYVVQYILDLGD-------ARFSEPLIH 133
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ NI + LS ++VI++C++ P L+EE+ + L D ++Q +
Sbjct: 134 RFIGNICL-LSVQKFSSNVIEKCIRMAEPPTRSLLIEELPKKIGSLIRDSYANYVIQTSL 192
Query: 420 PLAQEEQKARLIAD 433
A Q+ +L+ D
Sbjct: 193 DYADSTQRKQLMKD 206
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 11/294 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ L+G +I ++ ++ G +FLQ+ +D NP ++ +L E+ L +M N+ Q+L
Sbjct: 1007 LNSLKGNVIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQEL 1066
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + Q +++ + + IC + G+ +QK +D ++ Q
Sbjct: 1067 LINCSSAQRMQILERISVD---FVAICCNKKGTHTIQKFIDLVNLEAEEKFFQR------ 1117
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L LS G HVI+ ++ F + + +EI E ++LATD SG +++ I
Sbjct: 1118 -VLAGHVALLSSDVQGTHVIQNIIKCFEESKRQFVFDEIYEQFIELATDYSGLSVIKTII 1176
Query: 420 PLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ E + RL+ +VANA L+++ YGNY +Q ++ D++ Q G+ + LS
Sbjct: 1177 SKTHKPENRKRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLS 1236
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
L KCSSNV+ KC+ S E I+ E+I + LI + YGN+V+Q A +
Sbjct: 1237 LQKCSSNVIDKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNALKFA 1290
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 16/238 (6%)
Query: 299 LIGVL-NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L+ ++ N E+ T + + S + ++++ + +GS+ +Q+LLD Q L E QS
Sbjct: 990 LVKIMCNYEEATSQVQKLNSLKGNVIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSH 1049
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
L + + +GN+ + L +LE I+ + + + ++ G +Q
Sbjct: 1050 LPMVMVD--------NYGNYFCQELLINCSSAQRMQILERISVDFVAICCNKKGTHTIQK 1101
Query: 418 CIPLAQEEQKARLIADVVAN-AYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
I L E + + V+A +LS G +V+Q I+ V ++ ++
Sbjct: 1102 FIDLVNLEAEEKFFQRVLAGHVALLSSDVQGTHVIQNIIKCFEESKRQFVFDEIYEQFIE 1161
Query: 477 LSLGKCSSNVVQKCLLESGE-EQSTGIINEIIRHPEIVQLILDPYGNYVIQTA---WD 530
L+ +V++ + ++ + E ++ +++ + ++L +PYGNY IQ + WD
Sbjct: 1162 LATDYSGLSVIKTIISKTHKPENRKRLMGKLVAN--AIELAQNPYGNYAIQQSFEHWD 1217
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 173/331 (52%), Gaps = 19/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + + + EV+ +LM N++IQK
Sbjct: 688 LSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKF 747
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N EQ +L + ++L + + G RV+QK LD E EQ++LLV
Sbjct: 748 FEHGNPEQRKELASQLAG---QILPLSLQMYGCRVIQKALDVIEL--------EQKTLLV 796
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 797 RELDGHVMRCVRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRVL 856
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E +++ I D ++ + L++ YGNYV Q++L P + ++ +L G LS
Sbjct: 857 EHCTDELQSQFIVDEILESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLS 916
Query: 479 LGKCSSNVVQKCLLESGEEQSTG-IINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+KC LE G+ G +I EII H E ++ ++ D + NYVIQ D+
Sbjct: 917 QHKFASNVVEKC-LEYGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQKILDICT 975
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ R++L+ + ++ L+ + YGK+++++
Sbjct: 976 DNQ-RESLFVRIRVHAHALKKYTYGKHIVSR 1005
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +IA + ++ + D+ G +Q + E+KA + +V+ +A L +GNYV+Q
Sbjct: 688 LSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKF 747
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
P+ ++ +QLAG+ LSL V+QK L EQ T ++ E+ H +++
Sbjct: 748 FEHGNPEQRKELASQLAGQILPLSLQMYGCRVIQKALDVIELEQKTLLVRELDGH--VMR 805
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D GN+VIQ + +I + + L +H YG V+ +V
Sbjct: 806 CVRDQNGNHVIQKCIESVPTEKI-GFIISAFRSHVATLSTHPYGCRVIQRV 855
>gi|344302253|gb|EGW32558.1| hypothetical protein SPAPADRAFT_67158 [Spathaspora passalidarum
NRRL Y-27907]
Length = 926
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 164/312 (52%), Gaps = 36/312 (11%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSANH 294
+L+ I+ ++KD+ GCRFLQKK+DE + E+I ++ +++L+ N+
Sbjct: 217 QLKSEILKLSKDQYGCRFLQKKIDENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFGNY 276
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQKLI NE + L+L ++ Q+ L +I G+R +QK++D Q
Sbjct: 277 LIQKLIIYCNEANLN-LLLEIL--QENLFQISISQHGTRALQKIIDNLN-------NSYQ 326
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
LL+ LK + L K +GNHVI++ L K+ P + + + I ++ +AT + GCC+
Sbjct: 327 LELLIKGLKPYIIDLIKDLNGNHVIQKILNKYQPQDCQFIYDSIIDDLYIVATHKHGCCV 386
Query: 415 LQYCIPLAQEEQKARLIADVV--ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
LQ C+ Q + A ++ N +L +GNYV+QY++ + + ++ ++
Sbjct: 387 LQKCLNHVTPAQLQQFSAAILRFDNFKLLINDQFGNYVLQYLISIN----SFEMNYKIFE 442
Query: 473 RYFALSLG-----KCSSNVVQKCLL-----ESGEEQSTGIINEIIRH---PEIVQLILDP 519
+ ++G K SSNVV+K L E+ + + + E+I + ++ +LI DP
Sbjct: 443 NFVQFNIGNLCNLKFSSNVVEKFLKNCFNNETMDMSFSNLKFELIYNILINDLNKLINDP 502
Query: 520 YGNYVIQTAWDV 531
YGNYVIQT D+
Sbjct: 503 YGNYVIQTLIDI 514
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ L+ II + KD G +QK +++ P D + I +IDDL+ + H+ ++QK
Sbjct: 331 IKGLKPYIIDLIKDLNGNHVIQKILNKYQPQDCQFIYDSIIDDLYIVATHKHGCCVLQKC 390
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + Q+ + +++ L I D G+ V+Q L+ + ++ + +
Sbjct: 391 LNHVTPAQLQQFSAAILRFDNFKLLINDQF-GNYVLQYLISINSFEMNYKIFENFVQFNI 449
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L N+ ++ +++E+ +NC + T +
Sbjct: 450 GNLCNL-----------------------KFSSNVVEKFLKNCFNNET-----------M 475
Query: 420 PLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKI-PQVTADVVAQLA 471
++ K LI +++ N L YGNYV+Q ++ + I P V + V +L+
Sbjct: 476 DMSFSNLKFELIYNILINDLNKLINDPYGNYVIQTLIDILINPHVDNNQVEKLS 529
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 395 LEEIAENCLDLATDRSGCCLLQY-----CIPLAQEEQKAR--LIADVVANAYVLSEHSYG 447
L ++ L L+ D+ GC LQ IP Q + + Y L +G
Sbjct: 215 LIQLKSEILKLSKDQYGCRFLQKKIDENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFG 274
Query: 448 NYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
NY++Q ++ + + +++ + L F +S+ + + +QK + ++ +
Sbjct: 275 NYLIQKLI-IYCNEANLNLLLEILQENLFQISISQHGTRALQKIIDNLNNSYQLELLIKG 333
Query: 507 IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ P I+ LI D GN+VIQ + Q + Q +YD ++D+ + +H +G VL K
Sbjct: 334 LK-PYIIDLIKDLNGNHVIQKILNKYQPQDC-QFIYDSIIDDLYIVATHKHGCCVLQK 389
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 175/334 (52%), Gaps = 19/334 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++G I +KD+ G R +Q+K++ + + +++ EV+ +H LM N+++QK
Sbjct: 457 LSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKF 516
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ K IL+ S +L + + G RV+QK +++ E ++Q LL+
Sbjct: 517 FEHGTTEQ--KRILADKLSG-HILSLTLQMYGCRVIQKAIESIEL--------DKQILLI 565
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L V +GNHVI++C++K P + +++ + LAT GC ++Q +
Sbjct: 566 GELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRIL 625
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E+Q A ++ +++ A L + YGNYV+Q++L P+ + +V +L G+ + LS
Sbjct: 626 EHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQ 685
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-------IVQLILDPYGNYVIQTAWDVS 532
K +SNV++KC+ + IINEI+ +++++ DPY NYVIQ D+
Sbjct: 686 HKFASNVIEKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIV 745
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R + + + P L+ GK++++++
Sbjct: 746 EPAQ-RDMIINRIQPFVPTLKKVTPGKHIISRIE 778
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 341 AGEYPTRQQLTQE----QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
EY TR QL ++ + L +S +K SK G+ +I++ ++ + + + +
Sbjct: 435 TNEYTTRSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFD 494
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV-LSEHSYGNYVVQYIL 455
E+ L TD G +LQ EQK R++AD ++ + L+ YG V+Q
Sbjct: 495 EVVVAVHSLMTDVFGNYVLQKFFEHGTTEQK-RILADKLSGHILSLTLQMYGCRVIQK-- 551
Query: 456 GLKIPQVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--H 509
I + D ++ +L G + ++V+QKC+ E+ T +I II H
Sbjct: 552 --AIESIELDKQILLIGELNGHIVQCVTDQNGNHVIQKCI----EKIPTHLIQFIIDSFH 605
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
I QL PYG VIQ + +++ L +L+ +Q YG V+ V N
Sbjct: 606 GHIYQLATHPYGCRVIQRILEHCAEKQVAPILDELMRCAVSLVQDQ-YGNYVIQHVLEN 663
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 38/317 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPI--------DIEMILSEVIDDLHELMRHQS 291
+ +L+ I+ ++KD+ GCRFLQKK+DE N I + E+I +E+ +L+EL+
Sbjct: 87 LSQLKSDILRLSKDQYGCRFLQKKIDE-NLISNYSIRYANFEIIFNEIYLNLYELIIDPF 145
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+LIQKLI + E + L+L ++ Q L +I + G+R +QK++++ P
Sbjct: 146 GNYLIQKLIKYASNENLN-LMLDIL--QSNLFQISINQHGTRALQKIIESLNSPY----- 197
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
Q LL S LK + L K +GNHVI++ L KF P + + + I + + +AT + G
Sbjct: 198 --QLDLLTSGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHG 255
Query: 412 CCLLQYCIPLAQEEQKARLIADVV--ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
CC+LQ C+ +Q + + +++ N L +GNYV+QY++ + Q+ +
Sbjct: 256 CCVLQKCLNHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSN 315
Query: 470 LAGRYFALSLG--KCSSNVVQKCLLESG------EEQSTGIIN---EIIRH-----PEIV 513
L R+ + K SSNV++K + E + +N E++ H +
Sbjct: 316 LV-RFDMIHYCNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLN 374
Query: 514 QLILDPYGNYVIQTAWD 530
+LI DP+GNYVIQT D
Sbjct: 375 KLINDPFGNYVIQTLID 391
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 174/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ +P + +++ SE++ ++LM N++IQK
Sbjct: 835 LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKF 894
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 895 FEFGSMDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISIDQQSEMV 943
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 944 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRIL 1003
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + +V+++ G+ ALS
Sbjct: 1004 EHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQ 1063
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ S + +I+EI H + ++ D Y NYV+Q D+++
Sbjct: 1064 HKFASNVVEKCVTHSSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMIDMAEP 1123
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1124 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1153
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 606 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 665
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 666 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 714
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 715 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 774
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 775 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 830
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 831 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 890
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 891 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 924
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 89 LRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 148
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQ+ +V
Sbjct: 149 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISPDQQNEMV 197
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 198 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 257
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 258 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 317
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 318 HKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEP 377
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 378 AQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 407
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 867 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 926
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 927 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 977
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 978 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1037
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1038 EHCLP----EQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1093
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1094 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1153
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1154 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1187
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 177/338 (52%), Gaps = 34/338 (10%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ + D E I E++ + L N++IQK E Q+++L
Sbjct: 287 DQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQL- 345
Query: 313 LSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLS 370
+ Q R L++ + G RV+QK++D + E++ +V LKN +
Sbjct: 346 ----ADQLRGHFLQLSFQMYGCRVVQKVIDV--------VDLERKISIVGELKNSVLRCI 393
Query: 371 KSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE-EQKAR 429
+GNHVI++C++ P D+ ++E+I + L T + GC ++Q + ++
Sbjct: 394 SDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSA 453
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
++ ++V A+ L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +SNVV+K
Sbjct: 454 VMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 513
Query: 490 CLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLYD--LVV 546
CL ++ G+I EI+ + Q L+ D +GNYV+Q RI QT D LVV
Sbjct: 514 CLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQ---------RILQTCDDKFLVV 564
Query: 547 DNSPF------LQSHMYGKNVLAKVRGNKNRFHNRVAM 578
S L+++ +GK+++A+V NRV M
Sbjct: 565 ILSSIKMHLNELKNYTFGKHIVARVEKLIITGENRVRM 602
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQ 297
++LRG + ++ GCR +QK +D +D+E I+ E+ + + + Q+ NH+IQ
Sbjct: 347 DQLRGHFLQLSFQMYGCRVVQKVID---VVDLERKISIVGELKNSVLRCISDQNGNHVIQ 403
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K I + E+ + +I ++ Q++ +C G RV+Q++L+ P QS
Sbjct: 404 KCIECVPEDHIPFVIEDIL---QKIYPLCTHQYGCRVIQRVLEHCHNPA-------TQSA 453
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ + L++ GN+V++ L+ P+ ++++++ ++L+ + +++
Sbjct: 454 VMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 513
Query: 418 CIPLAQEEQKARLIADVVANAYV---LSEHSYGNYVVQYIL 455
C+ +++ LI ++V++ L + +GNYVVQ IL
Sbjct: 514 CLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 554
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S + EL+ ++ D+ G +QK ++ I ++ +++ ++ L HQ +IQ
Sbjct: 380 SIVGELKNSVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQ 439
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ + ++ + +R + +D G+ V+Q +L+ G E++S
Sbjct: 440 RVLEHCHNPATQSAVMDEIV--ERAFDLTEDKFGNYVVQHVLEHGR--------PEERSS 489
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCL 414
++ L V+LS+ + ++V+++CL PD + L+ EI + L D+ G +
Sbjct: 490 IIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYV 549
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+Q + ++ +++ + + L +++G ++V + L I
Sbjct: 550 VQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 594
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 606 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 665
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 666 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 714
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 715 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 774
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 775 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 830
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 831 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 890
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 891 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 924
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 171/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ +P + +++ SE++ ++LM N++IQK
Sbjct: 833 LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKF 892
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 893 FEFGSMDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISTDQQSEMV 941
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P ++E L+T GC ++Q +
Sbjct: 942 RELDGHVLKCVKDQNGNHVVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRIL 1001
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + +V ++ G+ LS
Sbjct: 1002 EHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQ 1061
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ S + +I+EI H + ++ D Y NYV+Q D+++
Sbjct: 1062 HKFASNVVEKCVTHSSRTERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1121
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1122 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1151
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 834
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 835 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 894
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 895 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 954
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 955 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1014
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1015 AQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 1044
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 174/325 (53%), Gaps = 26/325 (8%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
I V+KD++G R +Q+K+D + +I + + D +L + N++IQK+I +L EE+
Sbjct: 222 ISVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNYVIQKIIPLLTEEE 281
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
T+L S+V Q LL + G RV+QKL+D ++ +K +
Sbjct: 282 RTRLTASLVG-QIHLLSV--HPYGCRVIQKLVDVSP----------DVDFILEEVKGNLL 328
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
L + +GNHVI++C++K + +L++ +EN L LAT + GC ++Q + +EE+
Sbjct: 329 ELIEDQNGNHVIQKCIEKCKD--RRIILKQFSENSLFLATHKYGCRVIQRMLEFCKEEEI 386
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++ +++N L + YGNYV+Q+IL + + V+ ++ + + LS K SSNVV
Sbjct: 387 KDIVEVLISNIKTLVDDQYGNYVIQHILTVGKEKERNLVIEKIIEKSYELSKCKFSSNVV 446
Query: 488 QKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
++C+ S Q + + + P + + +D YGNYV+Q +D S G IR+ + +
Sbjct: 447 EQCVKLSNNGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQRLYD-SSGENIRKEIKN 505
Query: 544 LVVDNSPF---LQSHMYGKNVLAKV 565
+ PF L+ + +++L K+
Sbjct: 506 TL---RPFVRDLKKSPFARHILFKI 527
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 43/239 (17%)
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++K I +S+SK G+ I+R + + IA+ DL+ + G ++Q I
Sbjct: 215 TSMKEICISVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNYVIQKII 274
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV---VAQLAGRYFA 476
PL EE++ RL A +V ++LS H YG V+Q K+ V+ DV + ++ G
Sbjct: 275 PLLTEEERTRLTASLVGQIHLLSVHPYGCRVIQ-----KLVDVSPDVDFILEEVKGNLLE 329
Query: 477 LSLGKCSSNVVQKC---------------------------------LLESGEEQSTGII 503
L + ++V+QKC +LE +E+ I
Sbjct: 330 LIEDQNGNHVIQKCIEKCKDRRIILKQFSENSLFLATHKYGCRVIQRMLEFCKEEEIKDI 389
Query: 504 NEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
E++ I L+ D YGNYVIQ V + + R + + +++ S L + NV+
Sbjct: 390 VEVL-ISNIKTLVDDQYGNYVIQHILTVGKEKE-RNLVIEKIIEKSYELSKCKFSSNVV 446
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L G+I L++ GCR +QK VD +P D++ IL EV +L EL+ Q+ NH+IQK I
Sbjct: 289 LVGQIHLLSVHPYGCRVIQKLVD-VSP-DVDFILEEVKGNLLELIEDQNGNHVIQKCIEK 346
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
+ ++IL S L + G RV+Q++L+ +++ ++ +L+S +
Sbjct: 347 CKDR---RIILKQFSENS--LFLATHKYGCRVIQRMLEF----CKEEEIKDIVEVLISNI 397
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
K +L +GN+VI+ L ++E+I E +L+ + +++ C+ L+
Sbjct: 398 K----TLVDDQYGNYVIQHILTVGKEKERNLVIEKIIEKSYELSKCKFSSNVVEQCVKLS 453
Query: 423 QEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
Q+ + + + Y + YGNYVVQ
Sbjct: 454 NNGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQ 489
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 81/145 (55%), Gaps = 13/145 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+EE++G ++ + +D+ G +QK +++ D +IL + ++ L H+ +IQ++
Sbjct: 320 LEEVKGNLLELIEDQNGNHVIQKCIEKCK--DRRIILKQFSENSLFLATHKYGCRVIQRM 377
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EE++ ++ ++S+ + L+ DD G+ V+Q +L G+ +++++L++
Sbjct: 378 LEFCKEEEIKDIVEVLISNIKTLV---DDQYGNYVIQHILTVGK--------EKERNLVI 426
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQ 384
+ + LSK ++V+++C++
Sbjct: 427 EKIIEKSYELSKCKFSSNVVEQCVK 451
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 38/313 (12%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSANH 294
+L+ I+ +AKD+ GCRFLQKK+DE + ++I ++ ++EL+ N+
Sbjct: 297 QLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFDIIFNQTYQYMYELIIDPFGNY 356
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
LIQKLI NE + L++ ++ Q L +I + G+R +QK++D Q
Sbjct: 357 LIQKLIAYCNESNL-DLLMEIL--QYNLFQISINQHGTRALQKIIDNLN-------NSHQ 406
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
LL+ LK + L K +GNHVI++ L K+ P + + + I ++ +AT + GCC+
Sbjct: 407 LGLLIKGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCV 466
Query: 415 LQYC---IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
LQ C + L Q + +R I N +L +GNYV+QY++ + + D+ ++
Sbjct: 467 LQKCLNHVTLQQLGEFSRAILK-FENFKLLINDQFGNYVLQYLISIN----SLDINFKIF 521
Query: 472 GRYFALSLG-----KCSSNVVQKCLLE--SGEEQSTGIIN------EIIRHPEIVQLILD 518
+ + K SSNVV+K L + E ++ N II ++ LI D
Sbjct: 522 QNFITFGISNLCNLKFSSNVVEKFLKNCYTNETVNSSFANLKFELIYIILINDLNVLIND 581
Query: 519 PYGNYVIQTAWDV 531
PYGNYVIQT D+
Sbjct: 582 PYGNYVIQTMIDI 594
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ L+ II + KD G +QK +++ P D + I +IDDL+ + H+ ++QK
Sbjct: 411 IKGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCVLQKC 470
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + +Q+ + +++ + L I D G+ V+Q L+ ++ Q + +
Sbjct: 471 LNHVTLQQLGEFSRAILKFENFKLLINDQF-GNYVLQYLISINSLDINFKIFQNFITFGI 529
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S L N+ ++ +++E+ +NC T S L++
Sbjct: 530 SNLCNL-----------------------KFSSNVVEKFLKNCYTNETVNSSFANLKF-- 564
Query: 420 PLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKI-PQV 462
LI ++ N VL YGNYV+Q ++ + + PQV
Sbjct: 565 ---------ELIYIILINDLNVLINDPYGNYVIQTMIDIIVNPQV 600
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 381 RCLQKFPPDYTKDL----LEEIAENCLDLATDRSGCCLLQYCI--PLAQEEQKARLIADV 434
R QK +Y + L ++ L LA D+ GC LQ I L Q D+
Sbjct: 277 RMPQKIDKEYLASINKLPLIQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFDI 336
Query: 435 VAN-----AYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSNVVQ 488
+ N Y L +GNY++Q ++ + D++ + L F +S+ + + +Q
Sbjct: 337 IFNQTYQYMYELIIDPFGNYLIQKLIAY-CNESNLDLLMEILQYNLFQISINQHGTRALQ 395
Query: 489 KCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDN 548
K + G++ + ++ P I++LI D GN+VIQ + Q Q +YD ++D+
Sbjct: 396 KIIDNLNNSHQLGLLIKGLK-PYIIELIKDLNGNHVIQKILNKYQPPDC-QFIYDSIIDD 453
Query: 549 SPFLQSHMYGKNVLAK 564
+ +H +G VL K
Sbjct: 454 LYIVATHKHGCCVLQK 469
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 350 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 409
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 410 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 460
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 461 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRIL 520
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 521 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 576
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 577 VLSQDKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 636
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 637 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 670
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G II ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 862 LREIAGHIIEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 921
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ + +V
Sbjct: 922 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVIND----MV 972
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 973 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRIL 1032
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1033 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1088
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1089 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1148
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1149 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1182
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 834
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 835 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 894
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 895 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 954
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 955 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1014
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1015 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1044
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 749 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 809 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 859
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 860 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 919
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 920 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 975
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 976 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1035
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1036 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1069
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 843 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 902
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 903 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 953
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 954 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRIL 1013
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1014 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1130 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1163
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 835
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 836 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 895
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 896 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 955
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 956 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1015
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1016 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1045
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 707 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 766
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 767 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 817
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 818 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 877
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 878 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 937
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 938 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 997
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 998 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1027
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 835
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 836 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 895
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 896 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 955
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 956 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1015
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1016 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1045
>gi|341899697|gb|EGT55632.1| CBN-PUF-8 protein [Caenorhabditis brenneri]
Length = 531
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 174/338 (51%), Gaps = 26/338 (7%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+ +++G ++ AKD+ G RF+Q+K++ + + + I EV+ + EL+ N+++QK
Sbjct: 192 KLSDIKGNLLKFAKDQVGSRFIQQKLEYCDKKEKDSIFDEVVANAAELVDDIFGNYVVQK 251
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
E+ KL+ +VV +R+ + RV+QK L+ P Q +
Sbjct: 252 FFEYGEEKHWAKLVDAVV---ERVPEYAFQMYACRVLQKALEKVNEPL--------QIKI 300
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN---CLDLATDRSGCCLL 415
++ ++++ K +GNHV+++ ++K P+Y + +++ + +N D++ D GC ++
Sbjct: 301 LNKVRHVIYRCMKDQNGNHVVQKAIEKVGPEYIQFIVDTLLKNHKTVFDMSVDPYGCRVV 360
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q C+ +Q +I ++ ++ + YGNYVVQ+++ + ++ ++A + F
Sbjct: 361 QRCLEHCIPKQTRPIIERILERFDEVTNNQYGNYVVQHVIQHGTDEDRMFIIKRVAEKLF 420
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWD 530
+ K SSNV++KCL E I+ PE +VQ++ D Y NYV+Q +D
Sbjct: 421 EFATHKYSSNVIEKCLEEGTVYHKNMIVRSACNQPEGNMPVVVQMMKDQYANYVVQKMFD 480
Query: 531 ---VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q R + QT V + P L+ +GK++LAK+
Sbjct: 481 QVTTDQRRELIQT----VRPHIPVLRQFPHGKHILAKL 514
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 171/328 (52%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ ++ +++ +E++ + LM N++IQK
Sbjct: 422 LRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKF 481
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 482 FEFGSPEQKQALAQQV---KGHVLPLALQMYGCRVIQKALES--------IPAEQQQEIV 530
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 531 RELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRIL 590
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++A++ AN L + YGNYV+Q++L P+ + ++A + G+ LS
Sbjct: 591 EHCTPEQTAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQ 650
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + + ++ D Y NYV+Q DVS+ +
Sbjct: 651 HKFASNVVEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQ- 709
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 710 RKVLLHKIRPHMNSLKKYTYGKHIIAKL 737
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 751 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 810
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 811 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 861
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 862 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 921
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 922 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 977
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 978 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1037
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1038 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1071
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 812 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 862
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 863 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 922
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 923 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 978
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 979 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1038
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1039 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1072
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 812 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 862
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 863 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 922
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 923 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 978
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 979 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1038
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1039 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1072
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 174/336 (51%), Gaps = 23/336 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 696 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 755
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 756 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 806
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 807 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 866
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 867 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 922
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 923 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 982
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 983 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKLE 1017
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 908 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 958
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 959 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRIL 1018
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1019 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1074
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1075 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1134
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1135 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1168
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 907 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 762 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 812
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 813 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 872
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 873 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 989 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1022
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 762 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 812
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 813 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 872
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 873 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 989 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1022
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 762 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 812
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 813 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 872
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 873 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 989 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1022
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 762 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 812
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 813 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 872
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 873 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 989 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1022
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 147 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 206
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 207 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 257
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 258 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 317
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 318 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 377
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 378 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 437
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 438 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 467
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 583 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 642
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 643 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 693
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 694 RELDGHVLKCVKDQNGNHVVQKCVECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 753
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 754 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 809
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 810 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 869
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 870 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 903
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 843 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 902
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 903 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPPDQQVINE----MV 953
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 954 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1013
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1014 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1130 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1163
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 844 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 903
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 904 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 952
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 953 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1012
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1013 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1068
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1069 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1128
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1129 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1162
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 908 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1016
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1017 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1133 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 908 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1016
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1017 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1133 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1016
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1017 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1133 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 851 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 910
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 911 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 961
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 962 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1021
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1022 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1077
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1078 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1137
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1138 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1171
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 907 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1016
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1017 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1133 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 851 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 910
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 911 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 961
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 962 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1021
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1022 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1077
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1078 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1137
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1138 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1171
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 820 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 879
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 880 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 930
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 931 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 990
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 991 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1046
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1047 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1106
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1107 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1140
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 1100 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 1159
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 1160 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 1208
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 1209 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1268
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ N L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 1269 EHCTAEQTTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 1328
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 1329 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1388
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1389 KK-LMTKIRPHMTALRKYTYGKHINAKLE 1416
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 95/249 (38%), Gaps = 39/249 (15%)
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
Q +L + L N V S+ HG+ I++ L++ + + EI L TD G
Sbjct: 1093 QRYPNLQLRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFG 1152
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q EQK L V + L+ YG V+Q L P+ ++V +L
Sbjct: 1153 NYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELD 1212
Query: 472 GRYFALSLGKCSSNVVQKC------------------------------------LLESG 495
G + ++VVQKC L
Sbjct: 1213 GHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 1272
Query: 496 EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSH 555
EQ+T I++E+ H QLI D YGNYVIQ + + + + L + V L H
Sbjct: 1273 AEQTTPILDEL--HENTEQLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQH 1329
Query: 556 MYGKNVLAK 564
+ NV+ K
Sbjct: 1330 KFASNVVEK 1338
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 1169 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 1217
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 1218 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 1278 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 1337
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 1338 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1397
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + N L+ + YGK++ AK+
Sbjct: 1398 KK-LMTKIRKNMAALRKYTYGKHINAKLE 1425
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 850 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 909
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 910 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 960
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 961 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1020
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1021 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1076
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1077 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1136
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1137 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1170
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 992
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 993 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1052
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1053 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1169 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1202
>gi|354545908|emb|CCE42637.1| hypothetical protein CPAR2_202800 [Candida parapsilosis]
Length = 986
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 158/312 (50%), Gaps = 36/312 (11%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSANH 294
+L+ I+ +AKD+ GCRFLQKK+DE + E+I +V + EL+ N+
Sbjct: 290 QLKSEILKLAKDQYGCRFLQKKIDENLIPSYQVRAANFEIIFDQVYPYMCELIVDPFGNY 349
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
L+QK+I ++ + L+L ++ Q L +I + G+R +QK++D + Q
Sbjct: 350 LVQKMIPYCSDANL-DLMLEIL--QYNLCQISINQHGTRALQKIIDNLN-------STSQ 399
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+LL+ LK + L + +GNHVI++ L K+ P + + + I E+ +AT + GCC+
Sbjct: 400 LNLLIKGLKPYIIELIRDLNGNHVIQKILNKYEPPNCQFIYDSIIEDLYTVATHKHGCCV 459
Query: 415 LQYCIPLAQEEQKARLIADVVA--NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
LQ C+ ++Q + ++ N +L +GNYV+QY++ + + +V ++
Sbjct: 460 LQKCLNHVTQQQLNQFSKAILKFDNFKMLINDQFGNYVLQYLISIN----SIEVSCEMFQ 515
Query: 473 RYFALSL-----GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ--------LILDP 519
+F L K SSNVV+K + + + ++ I L+ DP
Sbjct: 516 NFFQFGLTNLCNSKFSSNVVEKFMKNCYNNEVVDVAFADLKFELIYNILANDLNVLVNDP 575
Query: 520 YGNYVIQTAWDV 531
+GNYVIQT D+
Sbjct: 576 FGNYVIQTMLDI 587
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 106/234 (45%), Gaps = 37/234 (15%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ L+ II + +D G +QK +++ P + + I +I+DL+ + H+ ++QK
Sbjct: 404 IKGLKPYIIELIRDLNGNHVIQKILNKYEPPNCQFIYDSIIEDLYTVATHKHGCCVLQKC 463
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + ++Q+ + +++ + I D G+ V+Q L+ ++ Q+
Sbjct: 464 LNHVTQQQLNQFSKAILKFDNFKMLINDQF-GNYVLQYLISINSIEVSCEMF---QNFFQ 519
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L N+ C KF + +++E+ +NC + +
Sbjct: 520 FGLTNL----------------CNSKF----SSNVVEKFMKNCYN-----------NEVV 548
Query: 420 PLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKI-PQVTADVVAQLA 471
+A + K LI +++AN VL +GNYV+Q +L + I PQ+ V++++
Sbjct: 549 DVAFADLKFELIYNILANDLNVLVNDPFGNYVIQTMLDILINPQINYHNVSKIS 602
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 173/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 717 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 776
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 777 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 827
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 828 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 887
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYVVQ++L P+ + VV+++ G ALS
Sbjct: 888 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQ 947
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 948 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMVDMAEP 1007
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1008 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1037
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 167/328 (50%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ P + +M+ SE++ + LM N++IQK
Sbjct: 847 LRDLVSHIVEFSQDQHGSRFIQQKLERATPTERQMVFSEILGAAYSLMTDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + + +L + + G RV+QK L++ + E Q+ +V
Sbjct: 907 FEFGLPEQKQALAQRI---RGHVLPLALQMYGCRVIQKALES--------IPPELQTEMV 955
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 956 KELDGHVLKCVKDQNGNHVVQKCIECVEPAALQFIVDAFRGQVYSLSTHPYGCRVIQRIL 1015
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ L+ ++ L + YGNYV+Q++L P+ + +V ++ G+ LS
Sbjct: 1016 EHCIVEQTKPLLDELHQQTESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQ 1075
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ S + +I+E+ + + + ++ D Y NYV+Q DVS+ +
Sbjct: 1076 HKFASNVVEKCITHSSRPERALLIDEVCSYNDGALYTMMKDQYANYVVQKMIDVSEPNQ- 1134
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + L+ + YGK++LAK+
Sbjct: 1135 RKILMHKIRPYVASLRKYTYGKHILAKL 1162
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 179/339 (52%), Gaps = 25/339 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 22 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 81
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 82 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 130
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE-----IAENCLD---LATDRSG 411
L + K +GNHV+++C++ P + +++ I+ NC L+T G
Sbjct: 131 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFKVFVLSTHPYG 190
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
C ++Q + EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++
Sbjct: 191 CRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 250
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQ 526
G+ ALS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q
Sbjct: 251 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 310
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
D+++ + R+ + + + L+ + YGK++LAK+
Sbjct: 311 KMIDMAEPAQ-RKIIMHKIRPHISTLRKYTYGKHILAKL 348
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +++ +E++ + LM N++IQK
Sbjct: 442 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKF 501
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 502 FEFGSPEQKQALAQQV---KGHVLPLALQMYGCRVIQKALES--------IPAEQQQEIV 550
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 551 RELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRIL 610
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ A ++ ++ AN L + YGNYV+Q++L P+ + ++A + G+ LS
Sbjct: 611 EHCTQEQTAPILGELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQ 670
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI--IRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + ++ D Y NYV+Q DVS+ +
Sbjct: 671 HKFASNVVEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQ- 729
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 730 RKVLLHKIRPHMNSLKKYTYGKHIIAKL 757
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 445 LTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEF 504
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L + ++V +L G +
Sbjct: 505 GSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQ 564
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE +EQ+ I+ E
Sbjct: 565 NGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQEQTAPILGE 624
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ H QLI D YGNYVIQ + + + L V L H + NV+ K
Sbjct: 625 L--HANTEQLIQDQYGNYVIQHVLEHGKPED-KSVLIAAVRGKVLILSQHKFASNVVEKC 681
Query: 566 RGNKNR 571
+ R
Sbjct: 682 VTHATR 687
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 252 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 311
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 312 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 362
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 363 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 422
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 423 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 478
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 479 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 538
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 539 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 572
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 179/341 (52%), Gaps = 34/341 (9%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
++ D+ G RF+Q+K++ + D E I E++ + L N++IQK E Q++
Sbjct: 411 LSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLS 470
Query: 310 KLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+L + Q R L++ + G RV+QK++D + E++ +V LKN +
Sbjct: 471 QL-----ADQLRGHFLQLSFQMYGCRVVQKVIDVVDL--------ERKISIVGELKNSVL 517
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE-EQ 426
+GNHVI++C++ P D+ ++E+I + L T + GC ++Q +
Sbjct: 518 RCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPAT 577
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
++ ++ ++V A+ L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +SNV
Sbjct: 578 QSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNV 637
Query: 487 VQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLYD-- 543
V+KCL ++ G+I EI+ + Q L+ D +GNYV+Q RI QT D
Sbjct: 638 VEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQ---------RILQTCDDKF 688
Query: 544 LVVDNSPF------LQSHMYGKNVLAKVRGNKNRFHNRVAM 578
LVV S L+++ +GK+++A+V NRV M
Sbjct: 689 LVVILSSIKMHLNELKNYTFGKHIVARVEKLIITGENRVRM 729
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 114/221 (51%), Gaps = 19/221 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQ 297
++LRG + ++ GCR +QK +D +D+E I+ E+ + + + Q+ NH+IQ
Sbjct: 474 DQLRGHFLQLSFQMYGCRVVQKVID---VVDLERKISIVGELKNSVLRCISDQNGNHVIQ 530
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K I + E+ + +I ++ Q++ +C G RV+Q++L+ P QS
Sbjct: 531 KCIECVPEDHIPFVIEDIL---QKIYPLCTHQYGCRVIQRVLEHCHNPA-------TQSA 580
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ + L++ GN+V++ L+ P+ ++++++ ++L+ + +++
Sbjct: 581 VMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEK 640
Query: 418 CIPLAQEEQKARLIADVVANAYV---LSEHSYGNYVVQYIL 455
C+ +++ LI ++V++ L + +GNYVVQ IL
Sbjct: 641 CLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 681
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
+L+ D+ G +Q + +A + + ++ +++ NA L+ +GNYV+Q
Sbjct: 410 ELSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQL 469
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNY 523
+ + QL G + LS VVQK + E+ I+ E+ +++ I D GN+
Sbjct: 470 SQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGEL--KNSVLRCISDQNGNH 527
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
VIQ + I + D++ P L +H YG V+ +V
Sbjct: 528 VIQKCIECVPEDHIPFVIEDILQKIYP-LCTHQYGCRVIQRV 568
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S + EL+ ++ D+ G +QK ++ I ++ +++ ++ L HQ +IQ
Sbjct: 507 SIVGELKNSVLRCISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQ 566
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ + ++ + +R + +D G+ V+Q +L+ G E++S
Sbjct: 567 RVLEHCHNPATQSAVMDEIV--ERAFDLTEDKFGNYVVQHVLEHGR--------PEERSS 616
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCL 414
++ L V+LS+ + ++V+++CL PD + L+ EI + L D+ G +
Sbjct: 617 IIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYV 676
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+Q + ++ +++ + + L +++G ++V + L I
Sbjct: 677 VQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 721
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +++ +E++ + LM N++IQK
Sbjct: 375 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKF 434
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 435 FEYGSPEQKQALAQQV---KGHVLPLALQMYGCRVIQKALES--------IPTEQQQEIV 483
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 484 RELDGHVLKCVKDQNGNHVVQKCIECVEPTALQFIIDAFRNQVYSLSTHPYGCRVIQRIL 543
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ + ++A++ AN L + YGNYV+Q++L P+ + ++A + G+ LS
Sbjct: 544 EHCTPEQTSPILAELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQ 603
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI--IRHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I E+ + ++ D Y NYV+Q DVS+ +
Sbjct: 604 HKFASNVVEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQ- 662
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 663 RKVLLHKIRPHMNSLKKYTYGKHIIAKL 690
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 840 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 899
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 900 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 948
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 949 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1008
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1009 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1064
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1065 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1124
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1125 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1158
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 823 LREIAGHIMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVDVFGNYVIQKF 882
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 883 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPADQQNEMV 931
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 932 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 991
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 992 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1047
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1048 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1107
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1108 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1141
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 847 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 895
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 896 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 955
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 956 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1011
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1012 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1071
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1072 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1105
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 847 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 895
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 896 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 955
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 956 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1011
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1012 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1071
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1072 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1105
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 847 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 895
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 896 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 955
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 956 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1011
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1012 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1071
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1072 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1105
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 789 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 848
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 849 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 897
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 898 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 957
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 958 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1013
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1014 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1073
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1074 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1107
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 834
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 835 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 894
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 895 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 954
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 955 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1014
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1015 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1044
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 774 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 833
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 834 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 882
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 883 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 942
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 943 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 998
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 999 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1058
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1059 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1092
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 173/337 (51%), Gaps = 17/337 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T + ++ G ++ + D+ G RF+Q+K++ P D M E++ LM N
Sbjct: 789 KTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATPEDKNMGFQEIVPRAITLMSDVFGN 848
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK ++Q +L +V +L + + G RV+QK L+ + +
Sbjct: 849 YVIQKFFEHGTQQQRRELASQLVG---HVLVLSLQMYGCRVIQKALEV--------VDVD 897
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
QQ+ LVS L + + +GNHVI++C++ PP ++ + L+T GC
Sbjct: 898 QQTQLVSELDGHVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCR 957
Query: 414 LLQYCIPLAQEEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + +EQK + ++ +++ + L++ YGNYVVQ++L +D++ +LAG
Sbjct: 958 VIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSDIITKLAG 1017
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTA 528
+ +S K +SNVV+KCL G + +++E++ H + + ++ D + NYV+Q
Sbjct: 1018 QIVQMSQHKFASNVVEKCLEYGGPAERQILVDEMLGHTDENEPLQAMMKDQFANYVVQKV 1077
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L + + L+ + YGK+++A+V
Sbjct: 1078 LETCDESQ-RELLLGRIRVHLHALKKYTYGKHIVARV 1113
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 784 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 834
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 835 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 894
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 895 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 954
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 955 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 1014
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 1015 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 1044
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 845 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 904
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 905 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPADQQNEMV 953
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 954 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1013
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1014 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1130 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1163
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 18/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ P + + E++ +LM N++IQK
Sbjct: 473 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 532
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q +L ++ LL+ + G RV+QK LD E R +L +E ++
Sbjct: 533 FEYGNSTQRKELADQLMGQIVPLLQ----MYGCRVIQKALDVIEPDQRVRLARELDGQVM 588
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++ +GNHVI++C++ P D +L L+ GC ++Q +
Sbjct: 589 RCVRD--------QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLL 640
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + R I + ++ + VLS+ YGNYV Q++L + + +L+G LS
Sbjct: 641 ERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLS 700
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
L K +SNV++KCL G + II EI E ++ ++ D YGNYV+Q ++
Sbjct: 701 LHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTA 760
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R TL+ V ++ L+ + YGK++++++
Sbjct: 761 DQ-RLTLFSRVRMHASALKKYTYGKHIVSRL 790
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ P + + E++ +LM N++IQK
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 589
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q +L ++ +++ + + G RV+QK LD E R +L +E ++
Sbjct: 590 FEYGNSTQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVM 646
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++ +GNHVI++C++ P D +L L+ GC ++Q +
Sbjct: 647 RCVRD--------QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLL 698
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + R I + ++ + VLS+ YGNYV Q++L + + +L+G LS
Sbjct: 699 ERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLS 758
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
L K +SNV++KCL G + II EI E ++ ++ D YGNYV+Q ++
Sbjct: 759 LHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTA 818
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R TL+ V ++ L+ + YGK++++++
Sbjct: 819 DQ-RLTLFSRVRMHASALKKYTYGKHIVSRL 848
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 177/339 (52%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + ++ ++ + D+ G RF+Q+K++ + I E+I LM
Sbjct: 676 NNKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVF 735
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q T+L + + +L + + G RV+QK L+ +
Sbjct: 736 GNYVIQKFFEHGTESQRTELANQLTA---HVLPLSLQMYGCRVIQKALEV--------VG 784
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+QQ+ +V+ L + + +GNHVI++C++ P D + ++ + L+T G
Sbjct: 785 VDQQTEMVAELDGSIMKCVRDQNGNHVIQKCIECVPEDRIQSIISSFYGQVVALSTHPYG 844
Query: 412 CCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + ++I D ++ + VL++ YGNYV+Q++L P + ++ +L
Sbjct: 845 CRVIQRVLEHCESIDTQQIIMDEIMQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKL 904
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP---EIVQLIL-DPYGNYVIQ 526
AG+ +S K +SNVV+KCL+ G E+ ++NE++ E +Q+++ DP+GNYV+Q
Sbjct: 905 AGQIVKMSQQKFASNVVEKCLIFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVVQ 964
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R + L + + + L+ + YGK+++++V
Sbjct: 965 KVLETCDDRSLELILSRIKIHLNA-LKRYTYGKHIVSRV 1002
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G ++ ++D+ G RF+Q+K+++ + + E+I E+ LM N++IQK
Sbjct: 459 LHDIVGHVVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKF 518
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q KL + Q +L + G RV+QK L+ + + + +V
Sbjct: 519 FEFGNAPQKKKLSKEL---QGNVLNLTLQTYGCRVIQKALEV--------IDNDDKDTVV 567
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S LK + + +GNHVI++C+++ PP + +++ + A GC ++Q +
Sbjct: 568 SELKGNVMRCVQDQNGNHVIQKCIERVPPKIIQFIVDGFKGKVYEQAIHNYGCRVIQRIL 627
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E Q ++ +++ N L YGNYVVQ++L P + ++A L+ + LS+
Sbjct: 628 EHCTEGQTVPILQEILDNILALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSI 687
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI--------IRHPEIVQLILDPYGNYVIQTAWDV 531
K +SNV++KC ++ +++ +I E+ I + ++ D + NYVIQ +
Sbjct: 688 NKFASNVIEKCFQQANKKERDNMITELIGDITSRDISETPLFAMMKDQFANYVIQKIIET 747
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+T+ + V + ++ YGK++L+ +
Sbjct: 748 CDASQ-RKTITEAVKPHQEKIKKLPYGKHILSTI 780
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 761 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 820
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 821 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 869
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 870 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 929
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ N L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 930 EHCTAEQTTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 989
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 990 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1049
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1050 KK-LMTKIRPHMTALRKYTYGKHINAKLE 1077
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 97/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 764 LLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEF 823
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 824 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 883
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+T I++E
Sbjct: 884 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 943
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 944 L--HENTEQLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 1001 VTHATRGERTGLIDEVCTF 1019
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 168/328 (51%), Gaps = 46/328 (14%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPI--------DIEMILSEVIDDLHELMRHQS 291
+++LR I+ +AKD+ GCRFLQKK+DE N I + ++I EV ++EL+
Sbjct: 131 LDQLRPEILKLAKDQYGCRFLQKKIDE-NVIPSSQIRTENFKVIFKEVYPFIYELIIDPF 189
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+L+QKLI ++ ++ LIL ++ Q L +I + G+R +QK++++
Sbjct: 190 GNYLVQKLIDYCDDANLS-LILEIL--QYNLFQISINQHGTRALQKIINSLN-------N 239
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
Q SLL+S L + L K +GNHVI++ L K+ P+ + + + I + +AT + G
Sbjct: 240 DYQLSLLISGLNPFIIELIKDLNGNHVIQKILNKYSPENCQFIYDSIINDLYVVATHKHG 299
Query: 412 CCLLQYCI------PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD 465
CC+LQ C+ L Q QK L+ D L+ +GNYV+QY++ + +
Sbjct: 300 CCVLQKCLNHVNSMQLVQFSQKI-LMFDTFRK---LTNDQFGNYVLQYLISIN----SIS 351
Query: 466 VVAQLAGRYFALSLG-----KCSSNVVQKCLLES--GEEQSTGIIN---EI---IRHPEI 512
+ ++ + + K SSNVV+K L E S N E+ + ++
Sbjct: 352 INLKMYENFMKFGVNNLCNLKFSSNVVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQGDL 411
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQT 540
++I DP+GNYVIQT D+ I T
Sbjct: 412 NKMINDPFGNYVIQTLIDILVNPSINYT 439
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 157/297 (52%), Gaps = 16/297 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++G ++ A D+ G RF+Q+K++ N E + E+ ++ +LM+ N++IQK
Sbjct: 507 LTDIKGHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 566
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q K IL V + +L + + + RV+QK L+ LT EQQ+ +V
Sbjct: 567 F--EHGDQTQKKIL-VGKMKGHVLELANQMYACRVVQKALE-------HALT-EQQASMV 615
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHVI++ + + P + + ++E N L+ + GC ++Q +
Sbjct: 616 KELEKDVLKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLL 675
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E Q+ ++ ++ A L YGNYV Q+++ +P+ A +VA + ++ S
Sbjct: 676 EKVEEPQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSK 735
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
K +SNVV++CL+ S + Q +++ ++ E ++ L+ D YGNYVIQ D
Sbjct: 736 HKFASNVVERCLICSNDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLLDT 792
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 142/265 (53%), Gaps = 8/265 (3%)
Query: 270 IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDL 329
IDI+ + +EVI D+ + ++++Q ++ ++Q K++ + +L+ D
Sbjct: 16 IDIDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDS 75
Query: 330 SGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
G++ +QKL+ + +++++ SLL L L GN V++RCL + +
Sbjct: 76 YGTKCVQKLIST--HNSKKEIALVSYSLLSGFL-----YLVMDLDGNQVLQRCLSCWSVE 128
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ + + C +ATD GCCLLQ CI + + +L+ ++ A+ L++H YGN+
Sbjct: 129 DNEFIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNH 188
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
+VQYI+ ++ P A++ AQ G+Y LS+ K S +VV+KC LE E I+ E +
Sbjct: 189 IVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKC-LEHIVETRARIVQEFLAV 247
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQG 534
P L+ DPY NYV+Q A ++G
Sbjct: 248 PYFENLLQDPYANYVVQCALKFTEG 272
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
VA DE GC LQ+ ++ N + ++ E+ L +H+ NH++Q +I + N +
Sbjct: 144 VATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYIIQMQNPSAIA 203
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
+L + +++ V++K L+ TR ++ QE L V +N L
Sbjct: 204 EL---TAQFNGKYVQLSMQKFSIHVVEKCLEHI-VETRARIVQE--FLAVPYFEN----L 253
Query: 370 SKSPHGNHVIKRCLQKF 386
+ P+ N+V++ C KF
Sbjct: 254 LQDPYANYVVQ-CALKF 269
>gi|448526042|ref|XP_003869269.1| Mpt5 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380353622|emb|CCG23133.1| Mpt5 RNA-binding protein [Candida orthopsilosis]
Length = 972
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 36/314 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDER-------NPIDIEMILSEVIDDLHELMRHQSA 292
+ +L+ I+ +AKD+ GCRFLQKK+DE + E+I ++ + EL+
Sbjct: 287 LTQLKPEILKLAKDQYGCRFLQKKIDENLISNYQVRATNFEVIFDQIYPYMCELIVDPFG 346
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+L+QK+ +E + LIL ++ Q L +I + G+R +QK++D +
Sbjct: 347 NYLVQKMTPYCSEGNL-NLILEIL--QYNLCQISVNQHGTRALQKIIDNLN-------ST 396
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
Q +LL+ LK + L + +GNHVI++ L K+ P + + + I E+ +AT + GC
Sbjct: 397 SQLNLLIKGLKPYIIDLIRDLNGNHVIQKILNKYDPPECQFIYDSIIEDLYTVATHKHGC 456
Query: 413 CLLQYCIPLAQEEQKARLIADVVA--NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C+LQ C+ +Q + ++ N +L +GNYV+QY++ + + DV ++
Sbjct: 457 CVLQKCLNHVTPQQLDQFSKAILKFDNFRMLINDQFGNYVLQYLISIN----SVDVNYKM 512
Query: 471 AGRYFALSL-----GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ--------LIL 517
+ L K SSNVV+K + ++ + ++ I L+
Sbjct: 513 FQNFLQSGLTNLCNSKFSSNVVEKFMKNCFNNETVDVAFANLKFELIYNILTGDLNVLVN 572
Query: 518 DPYGNYVIQTAWDV 531
DPYGNYVIQT D+
Sbjct: 573 DPYGNYVIQTMLDI 586
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 174/338 (51%), Gaps = 22/338 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +++G ++ AKD+ G RF+Q+K+++ + D +M+ SE++ + L+ N
Sbjct: 119 RVTTIDLADVQGHVVDFAKDQHGSRFIQQKLEQCSDEDKDMVFSEILPASYSLITDVFGN 178
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQQ 349
++IQK +Q L+ RL LS G RV+QK +++ + +
Sbjct: 179 YVIQKFFEFGTIDQKATLV-------DRLHGHVPSLSLHTYGCRVIQKAIESVPPYLQAE 231
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+ E ++ ++++ +GNHVI++C++ P ++ D+AT
Sbjct: 232 IINELDGFVLKSIRD--------QNGNHVIQKCIECVDPPLLTFIIVSFKGQVYDMATHP 283
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GC ++Q + +Q L+ ++ +A L +YGNYVVQ++L P+ + ++
Sbjct: 284 YGCRVIQRILEHCTAQQTDLLLKEIHLHADQLIADNYGNYVVQHVLEKGRPEQKSRIIGV 343
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQT 527
+ GR +LS K +SNVV+KC++ + + G+I+E+ PE I+ + D + NYV+Q
Sbjct: 344 IRGRVVSLSQHKFASNVVEKCIVHASRHERAGLIDELCSAPEGAILTMTKDQFANYVVQK 403
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
D+++ + + +Y L + P L+ Y K+++ K+
Sbjct: 404 MLDIAEPSQRKMLIYRL-RPHLPTLRKFTYAKHIVNKI 440
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +++ +E++ ++LM N++IQK
Sbjct: 21 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 80
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 81 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 129
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 130 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 189
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 190 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 249
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 250 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 309
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 310 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 339
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 1169 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 1217
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 1218 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 1278 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 1337
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 1338 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHMMMKDQYANYVVQKMIDVSEPTQL 1397
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1398 KK-LMTKIRPHMAALRKYTYGKHINAKLE 1425
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 173/325 (53%), Gaps = 26/325 (8%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
I ++KD++G R +Q+K+D + +I + + D EL + N++IQK+I ++ EE+
Sbjct: 222 ISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEEE 281
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
T+L S+V Q LL + G RV+QKL+D ++ +K +
Sbjct: 282 RTRLTTSLVG-QIHLLSV--HPYGCRVIQKLVDVSP----------DVDFILEEVKGNLL 328
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
L + +GNHVI++C++K + +L++ ++N L LAT + GC ++Q + +EE+
Sbjct: 329 ELIEDQNGNHVIQKCIEKCKD--RRIILQQFSKNSLFLATHKYGCRVIQRMLEFCKEEEI 386
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++ ++ N L + YGNYV+Q+IL + + V+ ++ + + LS K SSNVV
Sbjct: 387 KDIVEILINNIKTLVDDQYGNYVIQHILTVGKEKEKNLVIEKIIEKSYELSKCKFSSNVV 446
Query: 488 QKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
++C+ S Q + + + P + + +D YGNYV+Q +D S G IR+ + +
Sbjct: 447 EQCVKLSNNGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQRLYD-SSGENIRKEIKN 505
Query: 544 LVVDNSPF---LQSHMYGKNVLAKV 565
+ PF L+ + +++L K+
Sbjct: 506 AL---RPFIRDLKKSPFARHILFKI 527
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L G+I L++ GCR +QK VD +P D++ IL EV +L EL+ Q+ NH+IQK I
Sbjct: 289 LVGQIHLLSVHPYGCRVIQKLVD-VSP-DVDFILEEVKGNLLELIEDQNGNHVIQKCIEK 346
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
+ ++IL S L + G RV+Q++L+ +E+ +V L
Sbjct: 347 CKDR---RIILQQFSKNS--LFLATHKYGCRVIQRMLEF--------CKEEEIKDIVEIL 393
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
N +L +GN+VI+ L ++E+I E +L+ + +++ C+ L+
Sbjct: 394 INNIKTLVDDQYGNYVIQHILTVGKEKEKNLVIEKIIEKSYELSKCKFSSNVVEQCVKLS 453
Query: 423 QEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
Q+ R + + Y + YGNYVVQ
Sbjct: 454 NNGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQ 489
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 48/254 (18%)
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++K I +S+SK G+ I+R + + IA+ +L+ + G ++Q I
Sbjct: 215 TSMKEICISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKII 274
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV---VAQLAGRYFA 476
PL EE++ RL +V ++LS H YG V+Q K+ V+ DV + ++ G
Sbjct: 275 PLVTEEERTRLTTSLVGQIHLLSVHPYGCRVIQ-----KLVDVSPDVDFILEEVKGNLLE 329
Query: 477 LSLGKCSSNVVQKC---------------------------------LLESGEEQSTGII 503
L + ++V+QKC +LE +E+ I
Sbjct: 330 LIEDQNGNHVIQKCIEKCKDRRIILQQFSKNSLFLATHKYGCRVIQRMLEFCKEEEIKDI 389
Query: 504 NEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
EI+ + I L+ D YGNYVIQ V + + + + + +++ S L + NV+
Sbjct: 390 VEILIN-NIKTLVDDQYGNYVIQHILTVGKEKE-KNLVIEKIIEKSYELSKCKFSSNVVE 447
Query: 564 KV-----RGNKNRF 572
+ G + RF
Sbjct: 448 QCVKLSNNGQRERF 461
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+EE++G ++ + +D+ G +QK +++ D +IL + + L H+ +IQ++
Sbjct: 320 LEEVKGNLLELIEDQNGNHVIQKCIEKCK--DRRIILQQFSKNSLFLATHKYGCRVIQRM 377
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EE++ ++ ++++ + L+ DD G+ V+Q +L G+ +++++L++
Sbjct: 378 LEFCKEEEIKDIVEILINNIKTLV---DDQYGNYVIQHILTVGK--------EKEKNLVI 426
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQ 384
+ + LSK ++V+++C++
Sbjct: 427 EKIIEKSYELSKCKFSSNVVEQCVK 451
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 300 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 359
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 360 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 408
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 409 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 468
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 469 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 524
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 525 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 584
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 585 VAEPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 618
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 157/297 (52%), Gaps = 16/297 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++G ++ A D+ G RF+Q+K++ N E + E+ ++ +LM+ N++IQK
Sbjct: 503 LTDIKGHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 562
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q K IL V + +L + + + RV+QK L+ LT EQQ+ +V
Sbjct: 563 F--EHGDQTQKKIL-VGKMKGHVLELANQMYACRVVQKALE-------HALT-EQQASMV 611
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHVI++ + + P + + ++E N L+ + GC ++Q +
Sbjct: 612 KELEKDVLKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLL 671
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E Q+ ++ ++ A L YGNYV Q+++ +P+ A +VA + ++ S
Sbjct: 672 EKVEEPQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSK 731
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
K +SNVV++CL+ S + Q +++ ++ E ++ L+ D YGNYVIQ D
Sbjct: 732 HKFASNVVERCLICSDDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLLDT 788
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 54/225 (24%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK +D R P+ H IQ
Sbjct: 609 SMVKELEKDVLKTVKDQNGNHVIQKVID-RVPM-----------------------HHIQ 644
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K++ + +LSV S G RV+Q+LL+ E P R+
Sbjct: 645 KIVEAF---RGNVGVLSVNS------------YGCRVIQRLLEKVEEPQRR--------F 681
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+++ L L +GN+V + ++ P+ ++ I L + + +++
Sbjct: 682 ILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNVVER 741
Query: 418 CIPLAQEEQKARLIADVV-------ANAYVLSEHSYGNYVVQYIL 455
C+ + + Q+ L++ V+ +N L YGNYV+Q +L
Sbjct: 742 CLICSDDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLL 786
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 810 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 860
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 861 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 920
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 921 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 976
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 977 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1036
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1037 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1070
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 907 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 168/332 (50%), Gaps = 17/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + E++ EV+ +LM N++IQK
Sbjct: 621 LSDIIGHIVEFSTDQHGSRFIQQKLESCGVEEKELVFKEVLPHTSKLMTDVFGNYVIQKF 680
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ +L ++ ++L + + G RV+QK L+ + EQ++ LV
Sbjct: 681 FEYGSPEQRKELANRLLG---QILPLSLQMYGCRVIQKALEV--------IDLEQKAQLV 729
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P ++ L+ GC ++Q +
Sbjct: 730 HELDGNVMRCVRDQNGNHVIQKCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRVL 789
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
E + + I D ++ + + L++ YGNYV Q++L PQ + ++ +L+G F LS
Sbjct: 790 EHCSNEVQCQFIVDEILESVFTLAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLS 849
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL +I EI+ H + ++ ++ D + NYVIQ +++
Sbjct: 850 QHKFASNVVEKCLEYGDATDRQLLIAEIVGHDKQNDNLLTMMKDQFANYVIQKVFEICSE 909
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ R TL + ++ L+ + YGK+++A+
Sbjct: 910 NQ-RATLLSRIRLHAHALKKYTYGKHIVARFE 940
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 122/267 (45%), Gaps = 22/267 (8%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQKL 299
L G+I+ ++ GCR +QK ++ ID+E ++ E+ ++ +R Q+ NH+IQK
Sbjct: 696 LLGQILPLSLQMYGCRVIQKALEV---IDLEQKAQLVHELDGNVMRCVRDQNGNHVIQKC 752
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I + + + I+S Q LL + G RV+Q++L+ + Q +V
Sbjct: 753 IESIPTKNI-DFIISAFRGQIALLSM--HPYGCRVIQRVLEHCS-------NEVQCQFIV 802
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ +L++ +GN+V + L++ P ++ +++ + L+ + +++ C+
Sbjct: 803 DEILESVFTLAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLSQHKFASNVVEKCL 862
Query: 420 PLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+ LIA++V N + + + NYV+Q + + A +++++
Sbjct: 863 EYGDATDRQLLIAEIVGHDKQNDNLLTMMKDQFANYVIQKVFEICSENQRATLLSRIRLH 922
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQST 500
AL ++V + GEE T
Sbjct: 923 AHALKKYTYGKHIVARFEQLLGEENQT 949
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 664 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 712
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 713 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 772
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 773 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 828
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 829 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 888
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 889 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 922
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 201/429 (46%), Gaps = 41/429 (9%)
Query: 162 NIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTN--ASS 219
NI G L PNN L + N T + P N +G L +S N ASS
Sbjct: 297 NILGQPLRTPNNFHAMNPLQSLNNAMGTV--SPPGMGN--NGLLGPSFGRNTSFNSSASS 352
Query: 220 RYNNFYARARHHHHRTSYSS--------------------IEELRGRIILVAKDEQGCRF 259
NF A R S+ S + +L ++ ++D+ G RF
Sbjct: 353 LAGNFGLGAFQSSSRISFESMSDRSKLLEDFRNNKLPNPQLRDLVNHMVEFSQDQHGSRF 412
Query: 260 LQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQ 319
+Q+K++ P D E++ +E++ + L+ N++IQK + + EQ +L+ S+ +
Sbjct: 413 IQQKLERCTPGDRELVFNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQRVQLLNSI---K 469
Query: 320 QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVI 379
+L++ + G RV+QK L+A + Q+ +V L+ + K +GNHV+
Sbjct: 470 GHVLQLSLQMYGCRVIQKGLEAFSHLPEHQID------IVKELEGHVLKCVKDQNGNHVV 523
Query: 380 KRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAY 439
++ ++ P ++ +++ A L+T GC ++Q + +Q A+++ ++
Sbjct: 524 QKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQILDEIHPQTE 583
Query: 440 VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
L+ YGNYVVQ+IL + ++ GR L+ K +SNV++KC+ S
Sbjct: 584 QLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSSRTTR 643
Query: 500 TGIINEIIRHPE-IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV--VDNSPFLQSHM 556
+I+E+ E + ++ D Y NYV+Q D++ + R+ + + ++N L+ +
Sbjct: 644 ALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKRKLVSQMKPHINN---LKRYT 700
Query: 557 YGKNVLAKV 565
YGK+++ K+
Sbjct: 701 YGKHIITKL 709
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 664 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 712
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 713 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 772
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 773 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 828
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 829 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 888
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 889 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 922
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 810 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 860
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 861 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 920
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 921 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 976
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 977 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1036
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1037 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1070
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 664 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 712
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 713 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 772
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 773 GHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 828
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 829 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 888
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 889 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 922
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 24/334 (7%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G I +KD+ G R +Q+K++ N D +++ EVI +H LM N+++QK
Sbjct: 327 DIKGHIAEFSKDQVGSRIIQQKIENANAEDKQLVFDEVIVAVHSLMTDVFGNYVLQKFFE 386
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ +Q K IL+ + +L + + G RV+QK +++ E +QQ +L+
Sbjct: 387 HGSSDQ--KRILAE-KLKGNILLLALQMYGCRVIQKAIESIEL--------DQQIMLIQE 435
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V +GNHVI++C++K P + + +++ + LAT GC ++Q +
Sbjct: 436 LDGHIVQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFNGHIYHLATHPYGCRVIQRILEH 495
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
E+Q A ++ +++ A L + YGNYV+Q++L + +V +L + + LS K
Sbjct: 496 CSEQQVAPILEELMRCAVSLVQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHK 555
Query: 482 CSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDV---S 532
+SNV++KC+ + IINEI+ +++++ DPY NYVIQ D+ S
Sbjct: 556 FASNVIEKCVQYGSTAERAMIINEILGDQSGTTSSAMLKVLKDPYANYVIQKILDIVDQS 615
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
Q I Q + + L+ YGK++++++
Sbjct: 616 QREMIIQRIQPYIAT----LRKVTYGKHIISRIE 645
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 870 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 929
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 930 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 980
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 981 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1040
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1041 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1096
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1097 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1156
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1157 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1190
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 166/331 (50%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + + E++ +LM N++IQK
Sbjct: 528 LSDITGHIVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKF 587
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q +L ++ +++ + + G RV+QK LD E R +L +E ++
Sbjct: 588 FEYGNSAQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVM 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++ +GNHVI++C++ P D +L L+ GC ++Q +
Sbjct: 645 RCVRD--------QNGNHVIQKCIENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLL 696
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + R I + ++ + VLS+ YGNYV Q++L + +V +L+G LS
Sbjct: 697 ERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLS 756
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
L K +SNV++KCL G + II EI E ++ ++ D YGNYV+Q ++
Sbjct: 757 LHKFASNVIEKCLEYGGRIERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTA 816
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R TL+ V ++ L+ + YGK+++ ++
Sbjct: 817 DQ-RATLFSRVRMHASALKKYTYGKHIVTRL 846
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 907 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 907 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 906 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 956
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1016
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1017 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1133 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1166
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 907 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 957
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 958 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1017
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1018 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1134 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 749 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 809 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 859
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 860 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 919
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 920 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 975
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 976 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1035
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1036 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1069
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 876 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 935
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 936 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 986
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 987 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1046
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1047 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1102
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1103 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1162
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1163 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1196
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 603 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 662
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 663 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 711
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 712 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 771
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 772 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 827
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 828 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 887
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 888 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 921
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 157/299 (52%), Gaps = 16/299 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ ++ +QQS +V
Sbjct: 785 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQSEMV 833
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 834 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 893
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 894 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 953
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 954 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAE 1012
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 176/341 (51%), Gaps = 26/341 (7%)
Query: 234 RTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNPIDI-EMILSEVIDDLHELMRHQ 290
R S+E ++ GR+ V+ D+ G RF+Q+K+ E +D+ E I E++ + L
Sbjct: 406 RNGLDSVELIDVVGRVKEVSMDQYGSRFIQQKL-EIASLDVREKIFPEILSNAIALTTDV 464
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
N++IQK E Q+ +L + + +L + + G RV+QK+L+ + + +
Sbjct: 465 FGNYVIQKFFEFATESQLIQLADKL---KGHILELSLQMYGCRVVQKVLEVVDMDRKIDI 521
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
E LKN + +GNHVI++C++ P D +++ I L L T +
Sbjct: 522 VHE--------LKNYVLKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQY 573
Query: 411 GCCLLQYCI-----PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD 465
GC ++Q + P+ Q + ++ ++V + L++ +GNYVVQ++L P+ +
Sbjct: 574 GCRVIQRVLEHCHDPVTQ----SAIMNEIVQQTFHLTDDKFGNYVVQHVLEHGKPEERSS 629
Query: 466 VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYV 524
++ +L+G+ LS K +SNV++KCL E+ +I EII + Q L+ D +GNYV
Sbjct: 630 IIQKLSGQVVILSKQKFASNVIEKCLAFGTPEERDSLIGEIISSGQTFQELMKDQFGNYV 689
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+Q + + L + + + L+++ YGK+++A+V
Sbjct: 690 VQRVLQTCDDKYLEMILSSIKLHLNE-LKNYTYGKHIVARV 729
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 241 EELRGRIILVAKDEQGCRFLQKK---VDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
++L+G I+ ++ GCR +QK VD IDI + E+ + + + + Q+ NH+IQ
Sbjct: 487 DKLKGHILELSLQMYGCRVVQKVLEVVDMDRKIDI---VHELKNYVLKCIGDQNGNHVIQ 543
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ-----QLTQ 352
K I + E+++ +I ++S ++L +C G RV+Q++L+ P Q ++ Q
Sbjct: 544 KCIECVPEDRIPFVIDPILS---QILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEIVQ 600
Query: 353 ------------------------EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP 388
E++S ++ L V LSK ++VI++CL P
Sbjct: 601 QTFHLTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVILSKQKFASNVIEKCLAFGTP 660
Query: 389 DYTKDLLEEI---AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHS 445
+ L+ EI + +L D+ G ++Q + ++ +++ + + L ++
Sbjct: 661 EERDSLIGEIISSGQTFQELMKDQFGNYVVQRVLQTCDDKYLEMILSSIKLHLNELKNYT 720
Query: 446 YGNYVVQYILGLKIPQVTADVVAQLAGRY 474
YG ++V + L + +A L+G++
Sbjct: 721 YGKHIVARVEKLIVTGEKRARMASLSGQH 749
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P QQ+ E +V
Sbjct: 810 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPADQQVINE----MV 860
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 861 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 920
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 921 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 976
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 977 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1036
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1037 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1070
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 1169 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 1217
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 1218 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 1278 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 1337
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 1338 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1397
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1398 KK-LMTKIRPHMAALRKYTYGKHINAKLE 1425
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 1169 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 1217
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 1218 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 1278 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 1337
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 1338 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1397
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1398 KK-LMTKIRPHMAALRKYTYGKHINAKLE 1425
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 192/393 (48%), Gaps = 25/393 (6%)
Query: 182 AATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIE 241
A +Y + S +S S F S G S S + R++ R +
Sbjct: 754 GAEAKYRSATTGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNN--RYPNLQLR 811
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
E+ G ++ ++D+ G RF+Q K++ +P + +++ +E++ ++LM N++IQK
Sbjct: 812 EIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 871
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 872 FGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MVRE 922
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ----Y 417
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 923 LDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEH 982
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+P EQ ++ ++ + L + YGNYV+Q++L + + +V+++ G L
Sbjct: 983 CLP----EQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGL 1038
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+KC+ S + +I+E+ H + ++ D Y NYV+Q DV+
Sbjct: 1039 SQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVA 1098
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ + + + L+ + YGK++LAK+
Sbjct: 1099 EPTQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1130
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 173/340 (50%), Gaps = 14/340 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 447 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 506
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 507 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 555
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 556 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 615
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 616 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQ 675
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 676 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 735
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVA 577
++ L + + L+ + YGK++ AK+ + N +A
Sbjct: 736 KK-LMTKIRPHMAALRKYTYGKHINAKLEKYYMKITNPMA 774
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 450 LTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEF 509
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 510 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 569
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 570 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 629
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L V L H + NV+ K
Sbjct: 630 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILITSVRGKVLVLSQHKFASNVVEKC 686
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 687 VTHATRGERTGLIDEVCTF 705
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 17/276 (6%)
Query: 223 NFYARARHHHHRT--SYS---SIEELRGRIILVAKDEQGCRFLQKKVDERNPID--IEMI 275
N +A HH H YS + E LRG + +AKD+ GCRFLQ+ + N + +I
Sbjct: 171 NGHAVNPHHSHVAVRGYSGNITPEGLRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRII 230
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
++EV+ + ELM Q AN LIQKL ++ ++ K+ + +++ I G+ +
Sbjct: 231 MNEVVPHVAELMIDQYANFLIQKLFDMMPQDVRYKV---ACVAAPKIISIALTPHGTFSV 287
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QK+++ ++E+ +L AL V L K HGNHVI++ LQ+F + +
Sbjct: 288 QKMVET-------IASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQRFSHADKEFIY 340
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ +C+ +A ++ GCC+LQ C+ A Q+A L+ ++ ++E +GNYV+QY+L
Sbjct: 341 AAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVL 400
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
+ T + L + K SSNV++K L
Sbjct: 401 ESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVL 436
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 749 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 809 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 859
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 860 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 919
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 920 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 975
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 976 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1035
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1036 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1069
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 175/328 (53%), Gaps = 32/328 (9%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ ++KD++G R +Q+K+D + +I + ++D EL + N++IQK+I +L EE+
Sbjct: 223 VSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEE 282
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+LI + ++ Q LL + G RV+QKL+D ++ +++ +
Sbjct: 283 RARLI-AKLAKQINLLSV--HPYGCRVIQKLVD----------VSSDVDFILEEVRDNLL 329
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKD---LLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
L + +GNHVI++C++K KD +L++ +EN L LAT + GC ++Q + +E
Sbjct: 330 ELIEDQNGNHVIQKCIEK-----CKDRNIILQQFSENSLFLATHKYGCRVIQRMLEFCRE 384
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
++ ++ +++N L + YGNYV+Q+IL + V+ ++ + + LS K SS
Sbjct: 385 DEIKNIVEVLISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRCKFSS 444
Query: 485 NVVQKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
NVV++C+ S Q + + + P + + +D YGNYV+Q +D S G IR+
Sbjct: 445 NVVEQCVKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYD-SSGENIRRE 503
Query: 541 LYDLVVDNSPF---LQSHMYGKNVLAKV 565
+ + PF L+ + +++L K+
Sbjct: 504 MKSAL---RPFVRDLKKSPFARHILFKI 528
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I +L +I L++ GCR +QK VD + D++ IL EV D+L EL+ Q+ NH+IQK
Sbjct: 287 IAKLAKQINLLSVHPYGCRVIQKLVDVSS--DVDFILEEVRDNLLELIEDQNGNHVIQKC 344
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I + +IL S L + G RV+Q++L+ R+ + +L+
Sbjct: 345 IEKCKDRN---IILQQFSENS--LFLATHKYGCRVIQRMLEF----CREDEIKNIVEVLI 395
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S +K +L +GN+VI+ L D ++E+I E +L+ + +++ C+
Sbjct: 396 SNIK----TLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCV 451
Query: 420 PLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
L+ Q+ R +A + Y + YGNYVVQ
Sbjct: 452 KLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 43/205 (20%)
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
++K+I VS+SK G+ I+R + I + +L+ + G ++Q IP
Sbjct: 217 SMKDICVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIP 276
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
L EE++ARLIA + +LS H YG V+Q K+ V++DV
Sbjct: 277 LLTEEERARLIAKLAKQINLLSVHPYGCRVIQ-----KLVDVSSDV-------------- 317
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
I+ E+ +++LI D GN+VIQ + + R I
Sbjct: 318 -------------------DFILEEV--RDNLLELIEDQNGNHVIQKCIEKCKDRNI--- 353
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +NS FL +H YG V+ ++
Sbjct: 354 ILQQFSENSLFLATHKYGCRVIQRM 378
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++L N++IQK
Sbjct: 820 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKF 879
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 880 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 930
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 931 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 990
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 991 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1046
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1047 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1106
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1107 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1140
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 476 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 535
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 536 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 584
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 585 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 644
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ N L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 645 EHCTAEQTTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 704
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 705 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 764
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 765 KK-LMTKIRPHMTALRKYTYGKHINAKL 791
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 479 LLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEF 538
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 539 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 598
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 599 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 658
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 659 L--HENTEQLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 715
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 716 VTHATRGERTGLIDEVCTF 734
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|123471212|ref|XP_001318807.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121901575|gb|EAY06584.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 407
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 174/328 (53%), Gaps = 24/328 (7%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI-GVLNEE 306
++++KD R LQK++ E + MI + + L+EL+ QSAN +IQKL G E+
Sbjct: 89 VIMSKDPNKSRNLQKRMQECPQSERNMIFNALSPYLNELVYDQSANFVIQKLCEGATPEQ 148
Query: 307 Q--MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
Q M L+ +++ I D RV+Q+ ++ + +L + L N
Sbjct: 149 QKIMLDFFLTDINN------IVDHSIACRVLQRFIECSTE------MKNVDTLFKALLPN 196
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ +SL S +GNH+++R + P D ++E I N + LA D GC ++Q +
Sbjct: 197 L-MSLCFSQNGNHIVQRFVVALP-DRLNTIIESILPNVIPLAIDNCGCRIVQRLFEQYKI 254
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
Q + ++ +V+ ++ L+ + YGNYVVQYIL + + ++ G++++ S+ K +S
Sbjct: 255 NQLSLIVNEVMKHSVDLATNQYGNYVVQYILSSGQTEYVSALLKSFKGKFYSFSIHKFAS 314
Query: 485 NVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
NV++KC+ + +++ I +EII HP I+ ++ D +GNYVIQ + + +
Sbjct: 315 NVIEKCIRGASDQEREDIFDEIIGTSGNFNHPRILSMVEDQFGNYVIQRIIEFGTPEQ-Q 373
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++++V DN L S Y ++VL +++
Sbjct: 374 TAVFEVVYDNYDRLYSLQYARHVLQRLQ 401
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 175/366 (47%), Gaps = 17/366 (4%)
Query: 205 LSDHHHLGSSTNASSRYNNFYARARHHHHRTSYS-SIEELRGRIILVAKDEQGCRFLQKK 263
+S + +S S+R N + R + + ++ + +A D+ G RFLQ
Sbjct: 255 MSRGDSMQASEVGSTRAQNILGQLRARGGQLPPGMKLGDVAADAVELAMDQYGSRFLQNA 314
Query: 264 VDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLL 323
++ P + + V+ +L N++IQKL L EE + L ++ +L
Sbjct: 315 LETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPEEHIVILSEQLLGD---IL 371
Query: 324 RICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCL 383
R+ + G RV+QK+L+ + EQQ L+V+ LK V + +GNHVI++C+
Sbjct: 372 RLSFHMYGCRVVQKVLE--------NVNAEQQVLIVNELKGHVVDCVEDQNGNHVIQKCI 423
Query: 384 QKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSE 443
+ P +++E N ++ GC ++Q I EE L+ +VV N ++LS+
Sbjct: 424 ETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMSEPLMQEVVENLWMLSQ 483
Query: 444 HSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
YGNYVVQ+++ VV +A K +SNVV+K LL + II
Sbjct: 484 DQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEKALLSGSRQNQDEII 543
Query: 504 NEII--RHPE--IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
+I P+ + + +D + NYV+Q ++SQG R+ L +++ + P L+ YGK
Sbjct: 544 GAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTN-REHLVNMLQLDLPNLRKVTYGK 602
Query: 560 NVLAKV 565
++ + V
Sbjct: 603 HIASAV 608
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
V L+ +G+ ++ L+ P D+ + + L TD G ++Q EE
Sbjct: 298 AVELAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPEE 357
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
L ++ + LS H YG VVQ +L + +V +L G + ++
Sbjct: 358 HIVILSEQLLGDILRLSFHMYGCRVVQKVLENVNAEQQVLIVNELKGHVVDCVEDQNGNH 417
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
V+QKC +E+ Q+ G I + R + ++ L YG V+Q + + + L V
Sbjct: 418 VIQKC-IETLPTQTLGFIVDEFRG-NVTRMSLHCYGCRVVQRLIE-RLPEEMSEPLMQEV 474
Query: 546 VDNSPFLQSHMYGKNVLAK-VRGNKNRFHNRV 576
V+N L YG V+ V N F N V
Sbjct: 475 VENLWMLSQDQYGNYVVQHVVEHGPNNFKNAV 506
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 175/328 (53%), Gaps = 32/328 (9%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ ++KD++G R +Q+K+D + +I + ++D EL + N++IQK+I +L EE+
Sbjct: 223 VSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEE 282
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+LI + ++ Q LL + G RV+QKL+D ++ +++ +
Sbjct: 283 RARLI-AKLAKQINLLSV--HPYGCRVVQKLVD----------VSSDVDFILEEVRDNLL 329
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKD---LLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
L + +GNHVI++C++K KD +L++ +EN L LAT + GC ++Q + +E
Sbjct: 330 ELIEDQNGNHVIQKCIEK-----CKDRNIILQQFSENSLFLATHKYGCRVIQRMLEFCRE 384
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
++ ++ +++N L + YGNYV+Q+IL + V+ ++ + + LS K SS
Sbjct: 385 DEIKNIVEVLISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRCKFSS 444
Query: 485 NVVQKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
NVV++C+ S Q + + + P + + +D YGNYV+Q +D S G IR+
Sbjct: 445 NVVEQCVKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYD-SSGENIRRE 503
Query: 541 LYDLVVDNSPF---LQSHMYGKNVLAKV 565
+ + PF L+ + +++L K+
Sbjct: 504 MKSAL---RPFVRDLKKSPFARHILFKI 528
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I +L +I L++ GCR +QK VD + D++ IL EV D+L EL+ Q+ NH+IQK
Sbjct: 287 IAKLAKQINLLSVHPYGCRVVQKLVDVSS--DVDFILEEVRDNLLELIEDQNGNHVIQKC 344
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I + +IL S L + G RV+Q++L+ R+ + +L+
Sbjct: 345 IEKCKDRN---IILQQFSENS--LFLATHKYGCRVIQRMLEF----CREDEIKNIVEVLI 395
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S +K +L +GN+VI+ L D ++E+I E +L+ + +++ C+
Sbjct: 396 SNIK----TLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCV 451
Query: 420 PLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
L+ Q+ R +A + Y + YGNYVVQ
Sbjct: 452 KLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 43/205 (20%)
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
++K+I VS+SK G+ I+R + I + +L+ + G ++Q IP
Sbjct: 217 SMKDICVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIP 276
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
L EE++ARLIA + +LS H YG VVQ K+ V++DV
Sbjct: 277 LLTEEERARLIAKLAKQINLLSVHPYGCRVVQ-----KLVDVSSDV-------------- 317
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
I+ E+ +++LI D GN+VIQ + + R I
Sbjct: 318 -------------------DFILEEV--RDNLLELIEDQNGNHVIQKCIEKCKDRNI--- 353
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +NS FL +H YG V+ ++
Sbjct: 354 ILQQFSENSLFLATHKYGCRVIQRM 378
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 173/330 (52%), Gaps = 18/330 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++RG I A D+ G RF+Q+K++ N +I +++E+ D+ L+ N+++QKL+
Sbjct: 674 DIRGHIAEFASDQHGSRFIQQKLEGANLEEIRSLVAELGPDIDRLVIDVFGNYVVQKLLE 733
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+E + +L+ + + +L + + G RV+QK L+ + R QL QE ++
Sbjct: 734 -HGDENIRQLLTKKL--EGHMLSLSLHMYGCRVVQKALEVLKGNERTQLVQELDGHVLQC 790
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
+++ +GNHVI++C++ P+ +++ + + LA GC ++Q +
Sbjct: 791 IRD--------QNGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRVLEH 842
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
+E KA ++A+++ A L YGNYV+Q+I+ A ++ + A + K
Sbjct: 843 CPKEHKAEILAEIMGCARDLIRDQYGNYVIQHIVEKGDADNKAVIMKVVLNEVVAFAQHK 902
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ------LILDPYGNYVIQTAWDVSQGR 535
+SNVV++CL Q I ++R + + L+ D +GNYV+Q DV+
Sbjct: 903 FASNVVERCLQYGSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFGNYVVQRILDVANED 962
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+++ + ++ + P+L+ + YGK+++AK+
Sbjct: 963 HLKRVV-SILKEQIPYLKKYSYGKHIIAKL 991
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 112/227 (49%), Gaps = 19/227 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++EL G ++ +D+ G +QK ++ P +I I+ V L H ++Q++
Sbjct: 780 VQELDGHVLQCIRDQNGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRV 839
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +E +++ ++ + L+R D G+ V+Q +++ G+ + +++++
Sbjct: 840 LEHCPKEHKAEILAEIMGCARDLIR---DQYGNYVIQHIVEKGD--------ADNKAVIM 888
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE------EIAENC--LDLATDRSG 411
+ N V+ ++ ++V++RCLQ P D +E + AE+C +L D+ G
Sbjct: 889 KVVLNEVVAFAQHKFASNVVERCLQYGSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFG 948
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK 458
++Q + +A E+ R+++ + L ++SYG +++ + L+
Sbjct: 949 NYVVQRILDVANEDHLKRVVSILKEQIPYLKKYSYGKHIIAKLENLR 995
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +I + + A+D+ G +Q + A E+ L+A++ + L +GNYVVQ +
Sbjct: 672 LLDIRGHIAEFASDQHGSRFIQQKLEGANLEEIRSLVAELGPDIDRLVIDVFGNYVVQKL 731
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L + + +L G +LSL VVQK L + T ++ E+ H ++Q
Sbjct: 732 LEHGDENIRQLLTKKLEGHMLSLSLHMYGCRVVQKALEVLKGNERTQLVQELDGH--VLQ 789
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
I D GN+VIQ ++ + I + D V + L H YG V+ +V
Sbjct: 790 CIRDQNGNHVIQKCIELVEPENI-VFIVDSVKGQAVALAEHAYGCRVVQRV 839
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 875 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 934
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 935 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 983
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 984 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1043
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1044 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1099
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1100 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1159
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1160 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1193
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++L N++IQK
Sbjct: 833 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKF 892
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 893 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 943
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 944 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1003
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1004 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1059
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1060 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1119
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1120 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1153
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 906 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPADQQNEMV 954
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 955 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1014
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1015 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1070
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1071 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1130
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1131 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 173/351 (49%), Gaps = 39/351 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E++RG+I+ + D+ G RF+Q K++ P + +L EV+ +++ L+ N+++QKL
Sbjct: 1024 LEDIRGQIVEFSTDQHGSRFIQTKLETATPDQVGWVLQEVLAEMNRLVTDVFGNYVVQKL 1083
Query: 300 I--GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+ G + Q + L + R+L + + G R +QK L+ L Q+
Sbjct: 1084 LEHGTARDLQAIAMKL-----KNRILALSLHMYGCRAVQKALEV--------LPASTQAE 1130
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
LV L + + +GNHVI++C+++ P + + +++ + + LA GC ++Q
Sbjct: 1131 LVIELDGHVLKCIRDQNGNHVIQKCIERVPGQHVQFIVDAVRGQAVSLAEHSYGCRVIQR 1190
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ + EEQK ++ +++ L YGNYV+Q+++ + A ++ + + ++
Sbjct: 1191 ILEYSPEEQKVPIMREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISM 1250
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-----------------------VQ 514
S K +SNVV++CL +I+ ++ ++ +
Sbjct: 1251 SQHKYASNVVERCLQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLID 1310
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
L+ D +GNYV+Q DV+ G RQ +L+ N ++ YGK++LA++
Sbjct: 1311 LVQDQFGNYVVQRVLDVA-GDEQRQQAAELLRANLNVIKRFSYGKHILARL 1360
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+T LE+I ++ +TD+ G +Q + A +Q ++ +V+A L +GNY
Sbjct: 1019 FTSWKLEDIRGQIVEFSTDQHGSRFIQTKLETATPDQVGWVLQEVLAEMNRLVTDVFGNY 1078
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
VVQ +L + + +L R ALSL VQK L ++ E+ H
Sbjct: 1079 VVQKLLEHGTARDLQAIAMKLKNRILALSLHMYGCRAVQKALEVLPASTQAELVIELDGH 1138
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+++ I D GN+VIQ + G+ + Q + D V + L H YG V+ ++
Sbjct: 1139 --VLKCIRDQNGNHVIQKCIERVPGQHV-QFIVDAVRGQAVSLAEHSYGCRVIQRI 1191
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 175/339 (51%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + ++ G ++ + D+ G RF+Q+K++ + + I E+I LM
Sbjct: 661 NNKTGSFELSDIVGHVVEFSTDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVF 720
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK + E Q +L + +L + + G RV+QK L+ +
Sbjct: 721 GNYVIQKFLDQGTESQRIELASQLTG---HVLPLSLQMYGCRVIQKALEV--------ID 769
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++Q+ +V+ L + + +GNHVI++C++ P D + + + L+T G
Sbjct: 770 VDRQTQMVAELDGSVMKCIRDQNGNHVIQKCIECVPGDRIQFITSAFYGQVVALSTHPYG 829
Query: 412 CCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + ++ ++I D ++ + L++ YGNYV+Q++L PQ + ++ +L
Sbjct: 830 CRVIQRVLEHCKDMNTQQVIMDEIMQSVCALAQDQYGNYVIQHVLEHGKPQQRSVIIRKL 889
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQ 526
AG+ +S K +SNVV+KCL G ++ ++NE++ + + ++ DP+GNYV+Q
Sbjct: 890 AGQIVLMSQQKFASNVVEKCLTFGGPDERQLLVNEMLGSTDENEPLQAMMKDPFGNYVVQ 949
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R + L + + S L+ + YGK+++++V
Sbjct: 950 KVLETCDDRSLELILSRIRIHLSA-LKRYTYGKHIVSRV 987
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 39/342 (11%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+++++ G I+ + D+ G RF+Q++++E +P + +M+ E++ LM N++IQK
Sbjct: 708 TLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQK 767
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
EQ+ L ++ + +L + + G RV+QK L+ ++ EQQ +
Sbjct: 768 FFEHGTPEQIKILGDELIGN---VLALSMQMYGCRVIQKALEV--------ISVEQQEKV 816
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHVI++C++K P L++ I LAT GC ++Q
Sbjct: 817 VKELEGNIMKCVKDQNGNHVIQKCIEKVP----SPLIQFI---VYHLATHPYGCRVIQRI 869
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ EEQ ++ +++ L + YGNYV+Q++L PQ A ++ +L G+ LS
Sbjct: 870 LEYCTEEQTTPILDELLRCTISLVQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLS 929
Query: 479 LGKCSSNVVQKCLLES----GEEQSTGIINEIIRHPEIVQL-----------ILDPYGNY 523
K +SNVV+KC+ + G+E ++ E EI+QL + D Y NY
Sbjct: 930 QHKFASNVVEKCIQCAFGPYGDESDRQMVIE-----EILQLRNDGATPLQIMMKDQYANY 984
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
VIQ DV + R L + + P L+ + YGK+++ ++
Sbjct: 985 VIQKLLDVVNENQ-RDQLITKIRPHVPALKKYTYGKHIINRL 1025
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 392 KDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
K L++I + ++ + D+ G +Q + A +K + +++ +A L +GNYV+
Sbjct: 706 KFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVI 765
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
Q P+ + +L G ALS+ V+QK L EQ ++ E+
Sbjct: 766 QKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQEKVVKEL--EGN 823
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
I++ + D GN+VIQ + ++ L +V + L +H YG V+ ++
Sbjct: 824 IMKCVKDQNGNHVIQKCIE-----KVPSPLIQFIVYH---LATHPYGCRVIQRI 869
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 845 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 904
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 905 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 953
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 954 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1013
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1014 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1130 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1163
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 166/331 (50%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + + ++ EV+ +LM N++IQK
Sbjct: 655 LSDIIGHIVEFSSDQHGSRFIQQKLESCSVEEKTLVFKEVLPHASKLMTDVFGNYVIQKF 714
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ +L +V ++L + + G RV+QK L+ E EQ++ LV
Sbjct: 715 FEYGSPEQRRELADRLVG---QILPLSLQMYGCRVIQKALEVIEL--------EQKAQLV 763
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P +L L+ GC ++Q +
Sbjct: 764 HELDGNVMRCVRDQNGNHVIQKCIESIPTKKISFILSAFRGQVATLSMHPYGCRVMQRVL 823
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E + + I D ++ + L++ YGNYV Q++L PQ + ++ +L+G LS
Sbjct: 824 EHCTDESQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLS 883
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + ++ EI H E ++ ++ D + NYV+Q D+
Sbjct: 884 QHKFASNVVEKCLEYGDTTERELLVAEIFGHDEKCDNLLTMMKDQFANYVVQKVIDICSE 943
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R L V ++ L+ + YGK+++A++
Sbjct: 944 NQ-RAMLLSHVRIHAHALKKYTYGKHIVARL 973
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 123/266 (46%), Gaps = 18/266 (6%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+ L G+I+ ++ GCR +QK ++ ++ E+ ++ +R Q+ NH+IQK I
Sbjct: 728 DRLVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKCI 787
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ-SLLV 359
+ ++++ ILS Q L + G RVMQ++L+ T E Q +V
Sbjct: 788 ESIPTKKIS-FILSAFRGQVATLSM--HPYGCRVMQRVLE--------HCTDESQCQFIV 836
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ +L++ +GN+V + L++ P ++ +++ + + L+ + +++ C+
Sbjct: 837 DEILESVCALAQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLSQHKFASNVVEKCL 896
Query: 420 PLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++ L+A++ N + + + NYVVQ ++ + A +++ +
Sbjct: 897 EYGDTTERELLVAEIFGHDEKCDNLLTMMKDQFANYVVQKVIDICSENQRAMLLSHVRIH 956
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQS 499
AL ++V + + GE Q+
Sbjct: 957 AHALKKYTYGKHIVARLEHQFGENQT 982
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 812 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 860
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 861 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 920
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 921 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 976
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 977 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1036
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1037 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1070
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 768 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 827
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 828 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 876
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 877 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 936
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 937 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 992
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 993 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1052
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1053 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1086
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 168/324 (51%), Gaps = 17/324 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ + D+ G RF+Q+K++ P D M+ EV+ LM N++IQK ++
Sbjct: 787 VVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQ 846
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q +L +V +L + + G RV+QK L+ + +QQ++LVS L
Sbjct: 847 QRRELANQLVG---HVLVLSLQMYGCRVIQKALEV--------VDVDQQTVLVSELDGHV 895
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ + +GNHVI++C++ PP ++ + L+T GC ++Q + +EQ
Sbjct: 896 MRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQ 955
Query: 427 KAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
K + ++ +++ + L++ YGNYVVQ++L +++ +LAG+ +S K +SN
Sbjct: 956 KQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASN 1015
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
VV+KCL G + +I+E++ H + + ++ D + NYV+Q + + R+ L
Sbjct: 1016 VVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVLETCDESQ-RELL 1074
Query: 542 YDLVVDNSPFLQSHMYGKNVLAKV 565
+ + L+ + YGK+++A+V
Sbjct: 1075 LGRIRVHLHALKKYTYGKHIVARV 1098
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 168/324 (51%), Gaps = 17/324 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ + D+ G RF+Q+K++ P D M+ EV+ LM N++IQK ++
Sbjct: 786 VVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQ 845
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q +L +V +L + + G RV+QK L+ + +QQ++LVS L
Sbjct: 846 QRRELANQLVG---HVLVLSLQMYGCRVIQKALEV--------VDVDQQTVLVSELDGHV 894
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ + +GNHVI++C++ PP ++ + L+T GC ++Q + +EQ
Sbjct: 895 MRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQ 954
Query: 427 KAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
K + ++ +++ + L++ YGNYVVQ++L +++ +LAG+ +S K +SN
Sbjct: 955 KQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASN 1014
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
VV+KCL G + +I+E++ H + + ++ D + NYV+Q + + R+ L
Sbjct: 1015 VVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVLETCDESQ-RELL 1073
Query: 542 YDLVVDNSPFLQSHMYGKNVLAKV 565
+ + L+ + YGK+++A+V
Sbjct: 1074 LGRIRVHLHALKKYTYGKHIVARV 1097
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 761 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 820
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 821 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 869
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 870 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 929
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 930 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 989
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 990 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 1049
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ L + + L+ + YGK++ AK+
Sbjct: 1050 KK-LMTKIRPHMAALRKYTYGKHINAKLE 1077
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 764 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 823
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 824 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 883
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+T I++E
Sbjct: 884 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 943
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 944 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 1001 VTHATRGERTGLIDEVCTF 1019
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 172/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 767 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 826
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 827 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 875
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 876 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 935
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 936 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 991
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 992 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1051
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1052 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1085
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 201/429 (46%), Gaps = 41/429 (9%)
Query: 162 NIDGLGLPRPNNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTN--ASS 219
NI G L PNN L + N T + P N +G L +S N ASS
Sbjct: 97 NILGQPLRTPNNFHAMNPLQSLNNAMGTV--SPPGMGN--NGLLGPSFGRNTSFNSSASS 152
Query: 220 RYNNFYARARHHHHRTSYSS--------------------IEELRGRIILVAKDEQGCRF 259
NF A R S+ S + +L ++ ++D+ G RF
Sbjct: 153 LAGNFGLGAFQSSSRISFESMSDRSKLLEDFRNNKLPNPQLRDLVNHMVEFSQDQHGSRF 212
Query: 260 LQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQ 319
+Q+K++ P D E++ +E++ + L+ N++IQK + + EQ +L+ S+ +
Sbjct: 213 IQQKLERCTPGDRELVFNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQRVQLLNSI---K 269
Query: 320 QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVI 379
+L++ + G RV+QK L+A + Q+ +V L+ + K +GNHV+
Sbjct: 270 GHVLQLSLQMYGCRVIQKGLEAFSHLPEHQID------IVKELEGHVLKCVKDQNGNHVV 323
Query: 380 KRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAY 439
++ ++ P ++ +++ A L+T GC ++Q + +Q A+++ ++
Sbjct: 324 QKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQILDEIHPQTE 383
Query: 440 VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
L+ YGNYVVQ+IL + ++ GR L+ K +SNV++KC+ S
Sbjct: 384 QLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSSRTTR 443
Query: 500 TGIINEIIRHPE-IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV--VDNSPFLQSHM 556
+I+E+ E + ++ D Y NYV+Q D++ + R+ + + ++N L+ +
Sbjct: 444 ALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKRKLVSQMKPHINN---LKRYT 500
Query: 557 YGKNVLAKV 565
YGK+++ K+
Sbjct: 501 YGKHIITKL 509
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E++ + LM N++IQK
Sbjct: 420 LRDLSNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKF 479
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 480 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 528
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 529 HELDGHVLKCVKDQNGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRIL 588
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 589 EHCTPEQTTPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 648
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 649 HKFASNVVEKCVTHATRSERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 708
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 709 KK-LMTKIRPHMTALRKYTYGKHINAKL 735
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 95/246 (38%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 423 LSNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 482
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 483 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 542
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 543 NGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQTTPILDE 602
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ H E LI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 603 LHEHTE--NLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 659
Query: 566 RGNKNR 571
+ R
Sbjct: 660 VTHATR 665
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 169/328 (51%), Gaps = 11/328 (3%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E+I + LM N++IQK
Sbjct: 24 LRDLANHIVEFSQDQHGSRFVQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKF 83
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L VV + +L + + G RV+QK L++ + EQQ +V
Sbjct: 84 FEPGTTEQKTTLAQKVVQVRGHVLNLALQMYGCRVIQKALES--------IPPEQQQEVV 135
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 136 RKLDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCSVIQRIL 195
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ A+ L YGNYVVQ++L + + +VA + G+ LS
Sbjct: 196 EHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQ 255
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I+E+ + + ++ D + NYV+Q DV++ +
Sbjct: 256 HKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQ- 314
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 315 RKVLMHKIRPHIGSLRKYTYGKHIIAKL 342
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 169/323 (52%), Gaps = 24/323 (7%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
I V+KD++G R +Q+K+D + +I + +++ EL + N+++QK+I +L E +
Sbjct: 221 INVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKIIPLLTEGE 280
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
T LI +V Q LL + G RV+QKL+D ++ +K +
Sbjct: 281 RTILITKLVG-QIHLLSV--HPYGCRVVQKLVDV----------SSDVDFILEEVKGNLL 327
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
L + +GNHVI++C++K K +L++ +EN L LAT + GC ++Q + ++++
Sbjct: 328 ELIEDQNGNHVIQKCIEKCKD--RKIILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEI 385
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++ ++ N L + YGNYV+Q+IL + + V+ ++ + + LS K SSNVV
Sbjct: 386 KGIVEVLIGNIKTLVDDQYGNYVIQHILAVGKEEERNLVIERIIEKSYELSKCKFSSNVV 445
Query: 488 QKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDVS-QGRR--IRQT 540
++C+ S Q + + + P + + D YGNYV+Q +D S +G R I+ T
Sbjct: 446 EQCVKLSNNGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQRLYDSSGEGVRKEIKNT 505
Query: 541 LYDLVVD--NSPFLQSHMYGKNV 561
L V D SPF + ++ N
Sbjct: 506 LRPFVKDLKKSPFARHILFKINT 528
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I +L G+I L++ GCR +QK VD + D++ IL EV +L EL+ Q+ NH+IQK
Sbjct: 285 ITKLVGQIHLLSVHPYGCRVVQKLVDVSS--DVDFILEEVKGNLLELIEDQNGNHVIQKC 342
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I + K+IL S L + G RV+Q++L E+ + ++ +V
Sbjct: 343 IEKCKDR---KIILQQFSENS--LFLATHKYGCRVIQRML---EFCKKDEIKG-----IV 389
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L +L +GN+VI+ L + ++E I E +L+ + +++ C+
Sbjct: 390 EVLIGNIKTLVDDQYGNYVIQHILAVGKEEERNLVIERIIEKSYELSKCKFSSNVVEQCV 449
Query: 420 PLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
L+ Q+ + + + Y + YGNYVVQ
Sbjct: 450 KLSNNGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQ 488
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 45/240 (18%)
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ +K I +++SK G+ I+R + + I E +L+ + G ++Q I
Sbjct: 214 NTMKEICINVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKII 273
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV---VAQLAGRYFA 476
PL E ++ LI +V ++LS H YG VVQ K+ V++DV + ++ G
Sbjct: 274 PLLTEGERTILITKLVGQIHLLSVHPYGCRVVQ-----KLVDVSSDVDFILEEVKGNLLE 328
Query: 477 LSLGKCSSNVVQKC---------LLESGEEQS-------------------------TGI 502
L + ++V+QKC +L+ E S GI
Sbjct: 329 LIEDQNGNHVIQKCIEKCKDRKIILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGI 388
Query: 503 INEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ +I + I L+ D YGNYVIQ V + R + + +++ S L + NV+
Sbjct: 389 VEVLIGN--IKTLVDDQYGNYVIQHILAVGKEEE-RNLVIERIIEKSYELSKCKFSSNVV 445
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 174/331 (52%), Gaps = 15/331 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ P + +M+ +E++ ++LM N++IQK
Sbjct: 19 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 78
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L++ + QQ+ E +V
Sbjct: 79 FEFGSLDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--ISSDQQVISE----MV 129
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 130 KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRIL 189
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V+++ G+ ALS
Sbjct: 190 EHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQ 249
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D+++
Sbjct: 250 HKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP 309
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK++LAK+
Sbjct: 310 AQ-RKIIMHKIRPHITTLRKYTYGKHILAKL 339
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 168/330 (50%), Gaps = 17/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ GR + + D+ G RF+Q+K++ + + + EV+ LM N++IQK
Sbjct: 695 LSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKF 754
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ +L + +++ + + G RV+QK L+ E + QL E ++
Sbjct: 755 FEHGTPEQRRELAYQLAG---QMIPLSLQMYGCRVIQKALEVIELDQKTQLVHELDGHVI 811
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++ +GNHVI++C++ P + ++ L++ GC ++Q +
Sbjct: 812 RCVRDQ--------NGNHVIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVL 863
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
E +++ I D ++ +AYVL+E YGNYV Q++L P + ++++L G+ +S
Sbjct: 864 EHCSEVSQSQFIVDEILESAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKIVQMS 923
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNV++KCL + +I EII E ++ ++ D + NYV+Q + S
Sbjct: 924 QHKYASNVIEKCLEYGSTSECELLIEEIIGQSEDNDNLLVMMKDQFANYVVQKILETSND 983
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ R+ L + + + L+ + YGK+++A+
Sbjct: 984 KQ-REILLNRIRVHLNALKKYTYGKHIVAR 1012
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 36/210 (17%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +IA ++ + D+ G +Q + E+KA + +V+ +A L +GNYV+Q
Sbjct: 695 LSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKF 754
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH----- 509
P+ ++ QLAG+ LSL V+QK L +Q T +++E+ H
Sbjct: 755 FEHGTPEQRRELAYQLAGQMIPLSLQMYGCRVIQKALEVIELDQKTQLVHELDGHVIRCV 814
Query: 510 -----------------PEIVQLILD------------PYGNYVIQTAWDVSQGRRIRQT 540
E + I+ PYG VIQ + Q
Sbjct: 815 RDQNGNHVIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQF 874
Query: 541 LYDLVVDNSPFLQSHMYGKNVLAKV--RGN 568
+ D +++++ L YG V V RGN
Sbjct: 875 IVDEILESAYVLAEDQYGNYVTQHVLERGN 904
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 449 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 508
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 509 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 557
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 558 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 617
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 618 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 677
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 678 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 737
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 738 KK-LMTKIRPHMAALRKYTYGKHINAKL 764
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 452 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 511
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 512 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 571
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 572 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 631
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 632 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 689 VTHATRGERTGLIDEVCTF 707
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 165/329 (50%), Gaps = 19/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + +M+ EV+ + +LM N+++QK
Sbjct: 486 LKDIEGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKF 545
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N QM K IL+ + +L + + G RV+QK L+ + EQQ+ LV
Sbjct: 546 FEHGN--QMQKTILAK-QMEGHVLSLSLQMYGCRVVQKALE--------HVLTEQQAKLV 594
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHVI++ +++ P + + ++ +LAT GC ++Q
Sbjct: 595 KELDGCILKCIKDQNGNHVIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGCRVIQRMF 654
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E Q L+ ++ L + YGNYV+Q+IL P V+ ++ G LS
Sbjct: 655 EHCTENQTEPLLDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSK 714
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+KC ++ G ++ ++ E + P + ++ D Y NYVIQ DV
Sbjct: 715 HKFASNVVEKC-VDFGSKRDRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKMLDVVD 773
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ R+ L + + FL+ + YGK+++
Sbjct: 774 DDQ-RELLVTKIKPHLQFLKKYTYGKHLI 801
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 384 QKFPP-DYTKDL-----------------LEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
Q PP D T + L++I + ++ + D+ G +Q + A +
Sbjct: 457 QAHPPQDITMSIRSPLLEEFRNSKNKKYELKDIEGHIVEFSGDQHGSRFIQQKLETANSD 516
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
+K + +V+ NA L +GNYV+Q + Q+ G +LSL
Sbjct: 517 EKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQMQKTILAKQMEGHVLSLSLQMYGCR 576
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
VVQK L EQ ++ E+ I++ I D GN+VIQ A + + I Q + +
Sbjct: 577 VVQKALEHVLTEQQAKLVKEL--DGCILKCIKDQNGNHVIQKAIERVPAQHI-QFIINAF 633
Query: 546 VDNSPFLQSHMYGKNVLAKV 565
L +H YG V+ ++
Sbjct: 634 HGQVYNLATHPYGCRVIQRM 653
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++EL + +D+ G +Q ++ P+D ++ ++ + +L +H+ A+++++K
Sbjct: 666 LDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNVVEKC 725
Query: 300 IGVLNEEQMTKLILSVVSSQQR----LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+ ++ LI V+ + L + D + V+QK+LD + +Q+
Sbjct: 726 VDFGSKRDRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKMLDV--------VDDDQR 777
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQK 385
LLV+ +K L K +G H+I+ QK
Sbjct: 778 ELLVTKIKPHLQFLKKYTYGKHLIQSKPQK 807
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 261 LRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKF 320
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 321 FEYGTQEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 369
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 370 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 429
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ A +++ + G+ ALS
Sbjct: 430 EHCTAEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQ 489
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 490 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 548
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++ K+
Sbjct: 549 RKVLMHKIRPHLGSLRKYTYGKHIIVKL 576
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 177/358 (49%), Gaps = 16/358 (4%)
Query: 212 GSSTNASSRYNNFYARARHHHHRTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNP 269
G + N S + +R + S++ +L I+ ++D+ G RF+Q+K++ +
Sbjct: 386 GGAANISDKNAGGRSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASA 445
Query: 270 IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDL 329
+ +++ E++ + LM N++IQK EQ + L V + +L + +
Sbjct: 446 NEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPEQKSTLAQKV---RGHVLPLALQM 502
Query: 330 SGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
G RV+QK L++ + EQQ +V L + K +GNHV+++C++ P
Sbjct: 503 YGCRVIQKALES--------IAPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPR 554
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ ++ A L+T GC ++Q + EQ ++ ++ A L + YGNY
Sbjct: 555 ALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQELHAATDQLIQDQYGNY 614
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
V+Q++L P+ A ++ + G+ ALS K +SNVV+KC+ + ++ +I E+
Sbjct: 615 VIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEKCVTHATRQERAVLIEEVCGF 674
Query: 510 PE--IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + ++ D Y NYV+Q DV++ + R+ L + + L+ + YGK+++ K+
Sbjct: 675 NDNALNVMMKDQYANYVVQKMIDVAEPAQ-RKILMHKIRPHLGSLRKYTYGKHIIVKL 731
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 511 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 570
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 571 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 619
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 620 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 679
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 680 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 739
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 740 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 799
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 800 KK-LMTKIRPHMAALRKYTYGKHINAKL 826
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 514 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 573
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 574 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 633
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+T I++E
Sbjct: 634 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 693
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 694 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 751 VTHATRGERTGLIDEVCTF 769
>gi|320166165|gb|EFW43064.1| pumilio [Capsaspora owczarzaki ATCC 30864]
Length = 1003
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 169/334 (50%), Gaps = 19/334 (5%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++ +L+ ++ A D+ G R +Q++++ + ++ E++ LM N++IQK
Sbjct: 531 TLTQLKDHVVEFASDQHGSRCIQQRLETATEREKNLVFDEILPHALHLMTDVFGNYVIQK 590
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L +L + + +LR+ + G RV+QK +++ + + QQ L
Sbjct: 591 LFEHGTAAHRLELARRL---EGHILRLSLQMYGCRVIQKAVES--------IPEPQQVAL 639
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHV+++C+++ P + + +++ L+T GC ++Q
Sbjct: 640 VRELEGSVIMCVKDQNGNHVVQKCIEQVPAMHLQFVVDSFRGLVPSLSTHPYGCRVIQRI 699
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ Q ++ +V+ N L + YGNYV+Q++L + A V+ + GR LS
Sbjct: 700 LEHCTPTQVMSMLQEVLGNCSRLIQDQYGNYVIQHVLEHGPQEAKAIVLDAMRGRIVPLS 759
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-------IVQLILDPYGNYVIQTAWDV 531
K +SNVV+KC++ S + + +INEI+ + ++ ++ DP+ NYV+Q DV
Sbjct: 760 QHKFASNVVEKCIVHSADLERVALINEILVQSDPGSPTSALLAMMRDPFANYVVQKMLDV 819
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R L + N L+ + YGK+++AKV
Sbjct: 820 ACEDQ-RNQLIARIRPNILSLRKYTYGKHIIAKV 852
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 112/243 (46%), Gaps = 20/243 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL G +I+ KD+ G +QK +++ + ++ ++ + L H +IQ++
Sbjct: 640 VRELEGSVIMCVKDQNGNHVVQKCIEQVPAMHLQFVVDSFRGLVPSLSTHPYGCRVIQRI 699
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ ++ V+ + RL++ D G+ V+Q +L+ G QE +++++
Sbjct: 700 LEHCTPTQVMSMLQEVLGNCSRLIQ---DQYGNYVIQHVLEHGP--------QEAKAIVL 748
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---------AENCLDLATDRS 410
A++ V LS+ ++V+++C+ L+ EI L + D
Sbjct: 749 DAMRGRIVPLSQHKFASNVVEKCIVHSADLERVALINEILVQSDPGSPTSALLAMMRDPF 808
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
++Q + +A E+Q+ +LIA + N L +++YG +++ + I Q V +
Sbjct: 809 ANYVVQKMLDVACEDQRNQLIARIRPNILSLRKYTYGKHIIAKVEKAPIVQAVPVVASSF 868
Query: 471 AGR 473
+
Sbjct: 869 GNK 871
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 161/302 (53%), Gaps = 16/302 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ GRI+ + D+ G RF+Q+K++ N + E + EV+ +LM N++IQK
Sbjct: 662 LSDVAGRIVEFSVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKF 721
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ +L + ++L++ + G RV+QK L+ E + +L QE ++
Sbjct: 722 FEHGSPEQRIELAEKLSG---QILQLSLQMYGCRVIQKALEVIELDQKAKLAQELDGHVM 778
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ + +GNHVI++C++ P ++ + ++ + L+T GC ++Q +
Sbjct: 779 RCVHD--------QNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVL 830
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E +++ I D ++ ++Y+L++ YGNYV Q++L P + ++++L G+ +S
Sbjct: 831 EHCSDELQSQCIVDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMS 890
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + + +I EII E ++ ++ D + NYV+Q + S
Sbjct: 891 QHKYASNVVEKCLKHADATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQKILETSND 950
Query: 535 RR 536
++
Sbjct: 951 KQ 952
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 7/235 (2%)
Query: 336 QKLLDAGEYPTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
Q+ +++ + P R +E +S +S + V S HG+ I++ L+ +
Sbjct: 634 QRAVNSADDPKRHYFLEELKSNNARKFELSDVAGRIVEFSVDQHGSRFIQQKLENCNVEE 693
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
+ + +E+ + L TD G ++Q EQ+ L + LS YG V
Sbjct: 694 KESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRIELAEKLSGQILQLSLQMYGCRV 753
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP 510
+Q L + A + +L G + ++V+QKC+ E II+
Sbjct: 754 IQKALEVIELDQKAKLAQELDGHVMRCVHDQNGNHVIQKCIECVPAEHIEFIISAF--RG 811
Query: 511 EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++V L PYG VIQ + Q + D ++++S L YG V V
Sbjct: 812 QVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESSYLLAQDQYGNYVTQHV 866
>gi|440298987|gb|ELP91602.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 486
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 167/321 (52%), Gaps = 18/321 (5%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ KD+QG R +Q+ +D + ++E I + + +D++ELM N++IQKL +++
Sbjct: 173 LCKDQQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGNYVIQKLFE-FGTKEIR 231
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
+ + VV S R++ + G RV+QK ++ + +Q +L +K V+
Sbjct: 232 DVFMDVVKS--RVVMLSTHTYGCRVIQKAVEF--------IDAKQMGILADEIKGHIVAF 281
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR 429
+ +GNHVI+R ++ P Y+ + EEI + + GC ++Q + ++
Sbjct: 282 VEDQNGNHVIQRFIEFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQKLVERREDVIHRT 341
Query: 430 LIADVVANAYVLSEHSYGNYVVQYIL--GLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L ++ N + L+ + YGNYV+Q++L G ++ Q V+ ++ G++ S K SSNVV
Sbjct: 342 LNKELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNM--VINEMKGKFCEFSTKKYSSNVV 399
Query: 488 QKCLLESGEEQSTGIINEIIRHPE---IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
+KC+ Q G +NEI + +++L+ DPY NYVIQT +V + + +
Sbjct: 400 EKCMHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQTLVEVMDEEQRKCFIEKR 459
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
V N L+ Y K++L ++
Sbjct: 460 VFPNINQLKKVSYSKHLLQRL 480
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ ++ R+++++ GCR +QK V+ + + ++ E+ + + Q+ NH+IQ+
Sbjct: 235 MDVVKSRVVMLSTHTYGCRVIQKAVEFIDAKQMGILADEIKGHIVAFVEDQNGNHVIQRF 294
Query: 300 IGVLNEEQMTKLILSVVSSQ--QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
I E M + S++S + ++ G RV+QKL++ E + L +E
Sbjct: 295 I-----EFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQKLVERREDVIHRTLNKE---- 345
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
L+N L+ + +GN+VI+ L+K ++ E+ + +T + +++
Sbjct: 346 ----LENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMKGKFCEFSTKKYSSNVVEK 401
Query: 418 CIPLAQEEQKARLIADVVANA-----YVLSEHSYGNYVVQYIL 455
C+ Q+ + ++ L + Y NYV+Q ++
Sbjct: 402 CMHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQTLV 444
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 89/224 (39%), Gaps = 55/224 (24%)
Query: 237 YSSI--EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
YSS+ EE+ G ++ K GCR +QK V+ R + + E+ +++ +L +Q N+
Sbjct: 302 YSSMISEEITGHVVSFGKHAYGCRVVQKLVERREDVIHRTLNKELENNIWDLAMNQYGNY 361
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
+IQ L+ G+RV Q
Sbjct: 362 VIQHLLE----------------------------KGTRV-------------------Q 374
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA-----ENCLDLATDR 409
Q+++++ +K S + ++V+++C+ P + EI E L L D
Sbjct: 375 QNMVINEMKGKFCEFSTKKYSSNVVEKCMHCCTPTQRDGFVNEICGKKDNEMLLKLMKDP 434
Query: 410 SGCCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQ 452
++Q + + EEQ+ I V N L + SY +++Q
Sbjct: 435 YANYVIQTLVEVMDEEQRKCFIEKRVFPNINQLKKVSYSKHLLQ 478
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
DL D+ G +Q + A + + + + + Y L +GNYV+Q + ++
Sbjct: 172 DLCKDQQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGNYVIQKLFEFGTKEIR 231
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNY 523
+ + R LS V+QK + +Q + +EI H IV + D GN+
Sbjct: 232 DVFMDVVKSRVVMLSTHTYGCRVIQKAVEFIDAKQMGILADEIKGH--IVAFVEDQNGNH 289
Query: 524 VIQ 526
VIQ
Sbjct: 290 VIQ 292
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 449 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 508
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 509 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 557
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 558 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 617
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 618 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 677
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 678 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 737
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 738 KK-LMTKIRPHMAALRKYTYGKHINAKL 764
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 452 LVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEF 511
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 512 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 571
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 572 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 631
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 632 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 689 VTHATRGERTGLIDEVCTF 707
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 173/341 (50%), Gaps = 14/341 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 511 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 570
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 571 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 619
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 620 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 679
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 680 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 739
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 740 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 799
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
++ L + + L+ + YGK++ AK+ + N + +
Sbjct: 800 KK-LMTKIRPHMAALRKYTYGKHINAKLEKYYMKITNPITV 839
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 514 LVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 573
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 574 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 633
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+T I++E
Sbjct: 634 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 693
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 694 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 751 VTHATRGERTGLIDEVCTF 769
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 875 LRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKF 934
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 935 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 983
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 984 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 1043
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ A +++ + G+ LS
Sbjct: 1044 EHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQ 1103
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 1104 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 1162
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++ K+
Sbjct: 1163 RKVLMHKIRPHLGSLRKYTYGKHIIVKLE 1191
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 39/252 (15%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L N V S+ HG+ I++ L++ + + +EI + L TD G ++
Sbjct: 872 SLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVI 931
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQK+ L V + L+ YG V+Q L P+ ++V +L G
Sbjct: 932 QKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVL 991
Query: 476 ALSLGKCSSNVVQKCL-------------LESGE-----------------------EQS 499
+ ++VVQKC+ +G+ EQ+
Sbjct: 992 KCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQT 1051
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
GI+ E+ H QLI D YGNYVIQ + + Q L V L H +
Sbjct: 1052 QGILQEL--HAATDQLIQDQYGNYVIQHVLEHGKPEDKAQ-LISSVRGKVLTLSQHKFAS 1108
Query: 560 NVLAKVRGNKNR 571
NV+ K + R
Sbjct: 1109 NVVEKCVTHATR 1120
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 513 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 572
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 573 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 621
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 622 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 681
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 682 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 741
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 742 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 801
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 802 KK-LMTKIRPHMAALRKYTYGKHINAKL 828
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 516 LVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 575
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 576 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 635
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+T I++E
Sbjct: 636 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 695
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 696 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 752
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 753 VTHATRGERTGLIDEVCTF 771
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 501 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 560
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 561 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 609
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 610 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 669
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 670 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 729
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 730 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 789
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 790 KK-LMTKIRPHMAALRKYTYGKHINAKL 816
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 504 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 563
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 564 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 623
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 624 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 683
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 684 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 740
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 741 VTHATRGERTGLIDEVCTF 759
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 875 LRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKF 934
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 935 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 983
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 984 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 1043
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ A +++ + G+ LS
Sbjct: 1044 EHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQ 1103
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 1104 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 1162
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++ K+
Sbjct: 1163 RKVLMHKIRPHLGSLRKYTYGKHIIVKLE 1191
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 39/252 (15%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L N V S+ HG+ I++ L++ + + +EI + L TD G ++
Sbjct: 872 SLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVI 931
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQK+ L V + L+ YG V+Q L P+ ++V +L G
Sbjct: 932 QKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVL 991
Query: 476 ALSLGKCSSNVVQKCL-------------LESGE-----------------------EQS 499
+ ++VVQKC+ +G+ EQ+
Sbjct: 992 KCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQT 1051
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
GI+ E+ H QLI D YGNYVIQ + + Q L V L H +
Sbjct: 1052 QGILQEL--HAATDQLIQDQYGNYVIQHVLEHGKPEDKAQ-LISSVRGKVLTLSQHKFAS 1108
Query: 560 NVLAKVRGNKNR 571
NV+ K + R
Sbjct: 1109 NVVEKCVTHATR 1120
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 171/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+ K++ P + +++ +E++ + LM +++IQK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFISXKMERATPAERQLVFNEILQAAYPLMVDVFGHYVIQKF 941
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 942 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 990
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 991 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1050
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1051 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1106
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1107 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1166
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1167 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1200
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 497 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 556
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 557 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 605
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 606 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 665
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 666 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 725
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 726 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 785
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 786 KK-LMTKIRPHMAALRKYTYGKHINAKL 812
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 500 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 559
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 560 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 619
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 620 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 679
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 680 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 736
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 737 VTHATRGERTGLIDEVCTF 755
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 205/440 (46%), Gaps = 52/440 (11%)
Query: 165 GLGLPRPNNLTVQRNLVAATNRYATTNN---ASPSYSNLSHGFLSDHHHLGSSTNASSRY 221
G+ P +N+ Q++ + TT N S SY SH + G+S+ +
Sbjct: 946 GIRPPSTHNIPYQQSFYSLPVGSGTTQNFHDNSASYPQPSHPQIGGLVPSGTSSTLPTDR 1005
Query: 222 NNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID 281
+ R+ R + ++ +L I+ A+D+ G RF+Q+K+++ + +D + E++
Sbjct: 1006 SRLLDEFRNG--RLPWLTLRDLTNHIVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILP 1063
Query: 282 DLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA 341
+ LM N++IQK + EQ L + + ++L + + G RV+QK +++
Sbjct: 1064 HAYSLMVDVFGNYVIQKFFELGTPEQKQILGQRI---RGQVLTLSLQMYGCRVIQKAVES 1120
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
+ + Q ++ L + K +GNHV+++C++ PP++ + +++ N
Sbjct: 1121 --------VPLDMQVAIIRELDGCVIKCVKDQNGNHVVQKCIESVPPEHLQFIVDSFTNN 1172
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
++T GC ++Q + EQ A ++A++ + L + YGNYV+Q++L +
Sbjct: 1173 VQSISTHSYGCRVIQRILEHCTPEQTAPILAELHQHTESLVKDQYGNYVIQHVLEHGKTE 1232
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--HPE-------- 511
+ +V + GR LS+ K +SNVV+K + + + +INE++ +P
Sbjct: 1233 DKSRIVDLIKGRVAELSVHKFASNVVEKAVANATRAERHSLINEVLESNYPTDPNDRPRS 1292
Query: 512 -------------------------IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV 546
+ ++ D Y NYV+Q DV++ + IR+ L + +
Sbjct: 1293 GDFLALSGSSDGGGSADEPHGNTSILCMMMKDQYANYVVQKMLDVAE-QPIRKELMNQIR 1351
Query: 547 DNSPFLQSHMYGKNVLAKVR 566
+ L+ + YGK+++ K+
Sbjct: 1352 PHLNSLRKYTYGKHIINKME 1371
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 11/250 (4%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D GSR +Q+ L+ Q + ++ + + SL GN+VI++
Sbjct: 1029 IVEFAQDQYGSRFIQQKLE--------QASAVDKTAVFREILPHAYSLMVDVFGNYVIQK 1080
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ P+ + L + I L L+ GC ++Q + + + +I ++
Sbjct: 1081 FFELGTPEQKQILGQRIRGQVLTLSLQMYGCRVIQKAVESVPLDMQVAIIRELDGCVIKC 1140
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ GN+VVQ + P+ +V ++S V+Q+ L EQ+
Sbjct: 1141 VKDQNGNHVVQKCIESVPPEHLQFIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQTAP 1200
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
I+ E+ +H E L+ D YGNYVIQ + + + + DL+ L H + NV
Sbjct: 1201 ILAELHQHTE--SLVKDQYGNYVIQHVLEHGKTED-KSRIVDLIKGRVAELSVHKFASNV 1257
Query: 562 LAKVRGNKNR 571
+ K N R
Sbjct: 1258 VEKAVANATR 1267
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 874 LRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKF 933
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 934 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 982
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 983 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 1042
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ A +++ + G+ LS
Sbjct: 1043 EHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQ 1102
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 1103 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 1161
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++ K+
Sbjct: 1162 RKVLMHKIRPHLGSLRKYTYGKHIIVKLE 1190
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 39/252 (15%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L N V S+ HG+ I++ L++ + + +EI + L TD G ++
Sbjct: 871 SLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVI 930
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQK+ L V + L+ YG V+Q L P+ ++V +L G
Sbjct: 931 QKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVL 990
Query: 476 ALSLGKCSSNVVQKCL-------------LESGE-----------------------EQS 499
+ ++VVQKC+ +G+ EQ+
Sbjct: 991 KCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQT 1050
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
GI+ E+ H QLI D YGNYVIQ + + Q L V L H +
Sbjct: 1051 QGILQEL--HAATDQLIQDQYGNYVIQHVLEHGKPEDKAQ-LISSVRGKVLTLSQHKFAS 1107
Query: 560 NVLAKVRGNKNR 571
NV+ K + R
Sbjct: 1108 NVVEKCVTHATR 1119
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 184/363 (50%), Gaps = 20/363 (5%)
Query: 211 LGSSTNASSRYNNFYARA---RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDER 267
+GS + + +N Y + ++T + ++ G ++ + D+ G RF+Q+K++
Sbjct: 635 MGSWNSENGLMDNGYGSSLLEEFKSNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETA 694
Query: 268 NPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICD 327
+ MI E++ LM N++IQK E Q TK + +++ + +L++
Sbjct: 695 STEQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTETQ-TKQLATLL--KGFVLQLSL 751
Query: 328 DLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFP 387
+ G RV+QK L+ E EQQ+ + L + + +GNHVI++C++ P
Sbjct: 752 QMYGCRVIQKALEVVEV--------EQQTQMALELDGSIMRCVRDQNGNHVIQKCIECIP 803
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ-KARLIADVVANAYVLSEHSY 446
+ + ++ + ++L+ GC ++Q + +E + ++ +++ + L+E Y
Sbjct: 804 QERIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQNAMMEEIMQSVVTLTEDQY 863
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q++L P+ + ++AQLAG+ +S K +SNVV+KCL EQ +INE+
Sbjct: 864 GNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVEKCLTFGSPEQRQILINEM 923
Query: 507 I----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ + + ++ D + NYV+Q + + R+ + + + L+ + YGK+++
Sbjct: 924 LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQN-RELILSRIKVHLNALKRYTYGKHIV 982
Query: 563 AKV 565
+V
Sbjct: 983 TRV 985
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 875 LRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKF 934
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 935 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 983
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 984 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 1043
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ A +++ + G+ LS
Sbjct: 1044 EHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQ 1103
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 1104 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 1162
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++ K+
Sbjct: 1163 RKVLMHKIRPHLGSLRKYTYGKHIIVKLE 1191
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 39/252 (15%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L N V S+ HG+ I++ L++ + + +EI + L TD G ++
Sbjct: 872 SLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVI 931
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQK+ L V + L+ YG V+Q L P+ ++V +L G
Sbjct: 932 QKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVL 991
Query: 476 ALSLGKCSSNVVQKCL-------------LESGE-----------------------EQS 499
+ ++VVQKC+ +G+ EQ+
Sbjct: 992 KCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQT 1051
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
GI+ E+ H QLI D YGNYVIQ + + Q L V L H +
Sbjct: 1052 QGILQEL--HAATDQLIQDQYGNYVIQHVLEHGKPEDKAQ-LISSVRGKVLTLSQHKFAS 1108
Query: 560 NVLAKVRGNKNR 571
NV+ K + R
Sbjct: 1109 NVVEKCVTHATR 1120
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 171/339 (50%), Gaps = 19/339 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + ++ +I + D+ G RF+Q+K++ N + I E+I LM
Sbjct: 649 NKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFG 708
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + +L + + G RV+QK L+ +
Sbjct: 709 NYVIQKFFEHGTASQRKELAEQLSG---HVLPLSLQMYGCRVIQKALEV--------VDS 757
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
EQQ+ +V+ L + + +GNHVI++C++ P + + ++ L L+T GC
Sbjct: 758 EQQTQMVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGC 817
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + ++I D ++ + +L++ YGNYV+Q++L P + ++++LA
Sbjct: 818 RVIQRVLEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLA 877
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL E+ ++NEI+ + + ++ DP+GNYV+Q
Sbjct: 878 GQIVKMSQQKFASNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQK 937
Query: 528 AWDVSQGRRIRQTLYDLVVD-NSPFLQSHMYGKNVLAKV 565
+ + L + V NS L+ + YGK+++++V
Sbjct: 938 VLESCDDHSLELILSRIRVHLNS--LKRYTYGKHIVSRV 974
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L +F + T+ L +I ++ ++ + D+ G +Q + A E+K ++ +++ +A L
Sbjct: 643 LDEFKSNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTL 702
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG--------------------- 480
+GNYV+Q ++ QL+G LSL
Sbjct: 703 MTDVFGNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQ 762
Query: 481 ----------KC-----SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
KC ++V+QKC+ +E+ II+ + +++ L PYG VI
Sbjct: 763 MVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAF--YGQVLALSTHPYGCRVI 820
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q + +Q + D ++ + L YG V+ V
Sbjct: 821 QRVLEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHV 860
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 173/329 (52%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G ++ + D+ G RF+Q+K++ + + MI E++ LM N++IQK
Sbjct: 665 DIVGHVVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQARTLMTDVFGNYVIQKFFE 724
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
E Q TK + +++ + +L++ + G RV+QK L+ E EQQ+ +
Sbjct: 725 YGTETQ-TKQLATLL--KGYVLQLSLQMYGCRVIQKALEVVEV--------EQQTQMALE 773
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + + +GNHVI++C++ P + + ++ + ++L+ GC ++Q +
Sbjct: 774 LDGSIMRCVRDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRVLEH 833
Query: 422 AQEEQ-KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+E + ++ +++ + L+E YGNYV+Q++L P+ + ++ QLAG+ +S
Sbjct: 834 CDDESTQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQ 893
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
K +SNVV+KCL EQ +INE++ + + ++ D + NYV+Q ++ +
Sbjct: 894 KFASNVVEKCLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLEICDDQN 953
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ + + + L+ + YGK+++A+V
Sbjct: 954 -RELILSRIKVHLNALKRYTYGKHIVARV 981
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + T+ L +I + ++ ++D+ G +Q + A E+K + +++ A L
Sbjct: 650 LEEFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQARTL 709
Query: 442 SEHSYGNYVVQ--------------------YIL-------GLKIPQVTADVVAQLAGRY 474
+GNYV+Q Y+L G ++ Q +VV
Sbjct: 710 MTDVFGNYVIQKFFEYGTETQTKQLATLLKGYVLQLSLQMYGCRVIQKALEVVEVEQQTQ 769
Query: 475 FAL----SLGKC-----SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
AL S+ +C ++V+QKC+ +E+ II+ H +V+L + PYG VI
Sbjct: 770 MALELDGSIMRCVRDQNGNHVIQKCIECIPQERIRFIISAFYGH--VVELSMHPYGCRVI 827
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q + + + + ++ + L YG V+ V
Sbjct: 828 QRVLEHCDDESTQNAMMEEIMQSVVTLTEDQYGNYVIQHV 867
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 171/339 (50%), Gaps = 19/339 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + ++ +I + D+ G RF+Q+K++ N + I E+I LM
Sbjct: 649 NKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFG 708
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + +L + + G RV+QK L+ +
Sbjct: 709 NYVIQKFFEHGTASQRKELAEQLSG---HVLPLSLQMYGCRVIQKALEV--------VDS 757
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
EQQ+ +V+ L + + +GNHVI++C++ P + + ++ L L+T GC
Sbjct: 758 EQQTQMVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGC 817
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + ++I D ++ + +L++ YGNYV+Q++L P + ++++LA
Sbjct: 818 RVIQRVLEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLA 877
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL E+ ++NEI+ + + ++ DP+GNYV+Q
Sbjct: 878 GQIVKMSQQKFASNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQK 937
Query: 528 AWDVSQGRRIRQTLYDLVVD-NSPFLQSHMYGKNVLAKV 565
+ + L + V NS L+ + YGK+++++V
Sbjct: 938 VLESCDDHSLELILSRIRVHLNS--LKRYTYGKHIVSRV 974
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L +F + T+ L +I ++ ++ + D+ G +Q + A E+K ++ +++ +A L
Sbjct: 643 LDEFKSNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTL 702
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG--------------------- 480
+GNYV+Q ++ QL+G LSL
Sbjct: 703 MTDVFGNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQ 762
Query: 481 ----------KC-----SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
KC ++V+QKC+ +E+ II+ + +++ L PYG VI
Sbjct: 763 MVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAF--YGQVLALSTHPYGCRVI 820
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q + +Q + D ++ + L YG V+ V
Sbjct: 821 QRVLEHCDDSNTQQIIMDEIMQSVCLLAQDQYGNYVIQHV 860
>gi|123483753|ref|XP_001324096.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121906973|gb|EAY11873.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 414
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 164/328 (50%), Gaps = 19/328 (5%)
Query: 246 RIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
R + +AKD Q CR LQ + ++L+ +I L EL SAN ++QKL+
Sbjct: 96 RYVNMAKDRQNCRKLQDDLQFGTDKFRNIVLNSLIPYLGELYCDPSANFVVQKLLDYATR 155
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
EQ + + ++ L I + GSRVMQK ++ + L E L S++
Sbjct: 156 EQKISFLNAF---KKDPLEIANHPCGSRVMQKFIECAD----TDLVDELYVFLSSSI--- 205
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
+ L +S HGN ++++ + P + ++++ I + L D GC ++Q+ +
Sbjct: 206 -LDLCQSLHGNRIVQQFIDILP-NRVPEIIKCIMPYTISLVADNCGCRVVQHLFQPFDQN 263
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
+ A LI++V+ A L+ + YGNYV+Q I+ + A+++ G Y++ S+ K +SN
Sbjct: 264 KLAPLISEVIKAAPQLTANQYGNYVIQNIIDDGNEEQVAELIKSYKGYYYSFSIHKFASN 323
Query: 486 VVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
V+++C+ + + Q I +II + I LI D +GNYVIQ + RI
Sbjct: 324 VIERCIRRANQAQREFIFADIIGVEENYNYDRIYSLITDKFGNYVIQRILEFGSDSRI-N 382
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
+YD+V N LQ Y K+V+ K++
Sbjct: 383 AIYDVVDKNYDELQDVGYAKHVITKLKA 410
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 187/377 (49%), Gaps = 19/377 (5%)
Query: 194 SPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKD 253
SP+ NLS G + H S S ++ + + +T + E+ G ++ + D
Sbjct: 569 SPAMRNLSGGVMGSWHSEAGSNLDESFPSSLLEEFKSN--KTRCFELSEIAGHVVEFSAD 626
Query: 254 EQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLIL 313
+ G RF+Q+K++ + M+ E++ LM N++IQK + Q+ +L
Sbjct: 627 QYGSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSASQIRELAD 686
Query: 314 SVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSP 373
+ +L + + G RV+QK ++ E +QQ+ +V+ L + +
Sbjct: 687 QLTG---HVLTLSLQMYGCRVIQKAIEVVEL--------DQQTKMVTELDGHIMRCVRDQ 735
Query: 374 HGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD 433
+GNHVI++C++ P D + ++ + + L+T GC ++Q + Q+ + R++ D
Sbjct: 736 NGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCQDTKTQRIMMD 795
Query: 434 -VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
++ + +L++ YGNYVVQ++L P + ++ +L G+ +S K +SNV++KCL
Sbjct: 796 EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLT 855
Query: 493 ESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDN 548
+ +++E++ + + ++ D + NYV+Q + +++ L + V
Sbjct: 856 FGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHL 915
Query: 549 SPFLQSHMYGKNVLAKV 565
+ L+ + YGK+++A+V
Sbjct: 916 NA-LKKYTYGKHIVARV 931
>gi|448107289|ref|XP_004205317.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|448110239|ref|XP_004201581.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359382372|emb|CCE81209.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359383137|emb|CCE80444.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
Length = 792
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 38/315 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDE------RNPID-IEMILSEVIDDLHELMRHQSA 292
+E++ I+ +AKD+ GCRFLQKK+DE + +D +I E+ ++EL+
Sbjct: 269 LEQISHFILRLAKDQHGCRFLQKKLDENIVTNYQTRVDNFNIIFKEIYPHIYELIIDPFG 328
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+LIQKL+ + T L+L ++ Q L +I + G+R +QKL+ + LT
Sbjct: 329 NYLIQKLVDYCGSDD-TSLVLEIL--QYNLFQISINQHGTRALQKLISS--------LTT 377
Query: 353 EQQ-SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
E Q SLL S L L K +GNHVI++ L K+P + + + I + L +AT + G
Sbjct: 378 EYQLSLLTSGLSPYITELIKDLNGNHVIQKILNKYPTQSCQFIYDSIINDLLIVATHKHG 437
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYV--LSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
CC+LQ C+ Q + ++ L +GNYV+QY++ + + V +
Sbjct: 438 CCVLQKCLNHVNNTQLNQFSQKILEYETFNKLINDQFGNYVLQYLISIN----SLCVNST 493
Query: 470 LAGRYFALSLG-----KCSSNVVQKCLL-----ESGEEQSTGIINEI---IRHPEIVQLI 516
+ + +G K SSNV++K L E+ + + + + E+ I ++ +LI
Sbjct: 494 MYENFITFGIGNLCTLKFSSNVIEKFLKNCYVNETNDVEFSSLKFELTLNILRSDLNKLI 553
Query: 517 LDPYGNYVIQTAWDV 531
+P+GNYVIQT D+
Sbjct: 554 NNPFGNYVIQTLIDI 568
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 168/334 (50%), Gaps = 14/334 (4%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
T S L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N+
Sbjct: 239 TRICSCATLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNY 298
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
+IQK EQ L + V + +L++ + G RV+ K L++ ++ EQ
Sbjct: 299 VIQKFFEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIHKGLES--------ISPEQ 347
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
Q +V L + K +GNHV+++C++ P + ++ L+T GC +
Sbjct: 348 QQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRV 407
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q + EQ ++ ++ N L + YGNYV+Q++L + + ++ + G+
Sbjct: 408 IQRILEHCTAEQTTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKV 467
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVS 532
LS K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS
Sbjct: 468 LVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVS 527
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ ++++ L + + L+ + YGK++ AK+
Sbjct: 528 EPTQLKK-LMTKIRPHMTALRKYTYGKHINAKLE 560
>gi|308502562|ref|XP_003113465.1| CRE-PUF-8 protein [Caenorhabditis remanei]
gi|308263424|gb|EFP07377.1| CRE-PUF-8 protein [Caenorhabditis remanei]
Length = 536
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 173/347 (49%), Gaps = 23/347 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++RG++I AKD+ G RF+Q+K++ + + + I EV+ EL+ N+++QK
Sbjct: 194 LSDIRGQVIKFAKDQVGSRFIQQKLEFCDSKEKDAIFDEVVAHAPELVDDIFGNYVVQKF 253
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
E+ +L+ +VV R+ + RV+QK L +++++ Q ++
Sbjct: 254 FEYGEEKHWARLVDAVVD---RIPEYAFQMYACRVLQKAL--------EKVSEPLQIKIL 302
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN---CLDLATDRSGCCLLQ 416
+ ++++ K +GNHVI++ ++K P Y + ++ + EN D++ D GC ++Q
Sbjct: 303 ARVRHVIHRCMKDQNGNHVIQKAIEKVSPPYVQFIVSTLLENPDTIYDMSVDPYGCRVVQ 362
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ +Q +I + ++ + YGNYVVQ+++ +V ++A F
Sbjct: 363 RCLEHCIPQQTRPVIERIHERFDDIANNQYGNYVVQHVILHGSDADRMLIVNRVADNLFE 422
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
S K SSNV++KCL ++ PE +VQ++ D Y NYV+Q +D
Sbjct: 423 FSTHKYSSNVIEKCLERGAIHHKAMLVGAACSQPEGCMPIVVQMMKDQYANYVVQKMFDQ 482
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
+ R+ L V + P L+ +GK++LAK+ F +V M
Sbjct: 483 VTSDQ-RRELILTVRSHIPVLRQFPHGKHILAKL---DKYFQKQVVM 525
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 168/330 (50%), Gaps = 17/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ GR++ + D+ G RF+Q+K++ + + + SEV+ +LM N++IQK
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKF 685
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I Q +L+ + +++ + + G RV+QK L+ + +Q++ L+
Sbjct: 686 IEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEV--------IDVDQKTELI 734
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P ++ L+T GC ++Q +
Sbjct: 735 RELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRIL 794
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
++++ I D ++ +A+ L+ YGNYV Q++L P ++ +L G +S
Sbjct: 795 EHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMS 854
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + + +I EI+ E ++ ++ D + NYV+Q ++S+
Sbjct: 855 QHKYASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKD 914
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ R+ L + + L+ + YGK+++A+
Sbjct: 915 QQ-REILVQRMKIHLQSLRKYTYGKHIVAR 943
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG 447
P+ K L +IA ++ + D+ G +Q + +E+KA + ++V+ A L +G
Sbjct: 619 PNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFG 678
Query: 448 NYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
NYV+Q + P ++V QLAG+ +LSL V+QK L +Q T +I E+
Sbjct: 679 NYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELD 738
Query: 508 RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +++ + D GN+VIQ + RI + L +H YG V+ ++
Sbjct: 739 GN--VLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAF-RGQVATLSTHPYGCRVIQRI 793
>gi|25150422|ref|NP_508980.2| Protein PUF-9 [Caenorhabditis elegans]
gi|351061611|emb|CCD69461.1| Protein PUF-9 [Caenorhabditis elegans]
Length = 703
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 177/341 (51%), Gaps = 28/341 (8%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++++++ +I AKD+ G RF+Q+K++ + D I + V+++ ELM N++IQK
Sbjct: 339 TLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQK 398
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
N EQ +L+ ++ + ++++ + G RV+QK L EY + ++ Q +
Sbjct: 399 FFEFGNNEQRNQLVGTIRGN---VMKLALQMYGCRVIQKAL---EY-----VEEKYQHEI 447
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD----LATDRSGCCL 414
+ ++ + K +GNHVI++ +++ P+ + +++ +N D L+ GC +
Sbjct: 448 LGEMEGQVLKCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRV 507
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP----QVTADVVAQL 470
+Q + EEQK ++ + + L YGNYV+Q+++ P Q+ DV++
Sbjct: 508 IQRVLEYCNEEQKQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISD- 566
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVI 525
+ K +SNV++KCL G + II+++ P ++Q++ DP+ NYV+
Sbjct: 567 --DLLKFAQHKFASNVIEKCLTFGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVV 624
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
Q DV+ + R+ + + + L+ + +GK++L K+
Sbjct: 625 QKMLDVADPQH-RKKITLTIKPHIATLRKYNFGKHILLKLE 664
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 387 PPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
P T L++I N ++ A D+ G +Q + A KA + V+ NA L +
Sbjct: 332 PNGQTPKTLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVF 391
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q + +V + G L+L V+QK L E+ I+ E+
Sbjct: 392 GNYVIQKFFEFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEM 451
Query: 507 IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV----DNSPFLQSHMYGKNVL 562
++++ + D GN+VIQ + + R+ Q + D DN L H YG V+
Sbjct: 452 --EGQVLKCVKDQNGNHVIQKVIERVEPERL-QFIIDAFTKNNSDNVYTLSVHPYGCRVI 508
Query: 563 AKV 565
+V
Sbjct: 509 QRV 511
>gi|268562677|ref|XP_002646736.1| Hypothetical protein CBG13130 [Caenorhabditis briggsae]
Length = 514
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 23/376 (6%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI 270
++ ++ ++ R R + + ++RG ++ AKD+ G RF+Q+K++ +
Sbjct: 147 FANTNRETATSDDLLTRFRSNPSMMKGLKLSDVRGMLLKFAKDQVGSRFIQQKLEFCDIN 206
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
+ + I EV+D+ EL+ N+++QK E+ T+L+ +VV R+ +
Sbjct: 207 EKDAIFDEVVDNAAELVDDIFGNYVVQKFFEYGEEKHWTRLVDAVVD---RVPEYAFQMY 263
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
RV+QK L+ P Q ++S ++++ K +GNHVI++ ++K P Y
Sbjct: 264 ACRVLQKALEKVNEPL--------QIKILSQIRHVIHRCMKDQNGNHVIQKAIEKVSPQY 315
Query: 391 TKDLLEEIAE---NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG 447
+ ++ + E N D++ D GC ++Q C+ Q +I + ++ + YG
Sbjct: 316 IQFIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHCIASQTRPIIERIHERFDDIANNQYG 375
Query: 448 NYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
NYVVQ+++ +V +++ F + K SSNV++KCL I+
Sbjct: 376 NYVVQHVILHGTEADRLLIVTRVSENLFDFASHKYSSNVIEKCLERGSIHHKNIIVRAAC 435
Query: 508 RHPE-----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
P+ +VQ++ D Y NYV+Q ++ + R+ L V + P L+ +GK++L
Sbjct: 436 SQPDGTMPIVVQMMKDQYANYVVQKMFEQVTPEQ-RRELILTVRSHIPILRQFAHGKHIL 494
Query: 563 AKVRGNKNRFHNRVAM 578
AK+ F +V M
Sbjct: 495 AKL---DKYFQKQVVM 507
>gi|330933813|ref|XP_003304306.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
gi|311319138|gb|EFQ87583.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++ ++ A D+ G RF+Q+K++ N E + E+ ++ +LM+ N++IQK
Sbjct: 508 LTDIKDHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 567
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K IL V + +L + + + RV+QK L+ LT EQQ+ +V
Sbjct: 568 FE--HGDQVQKKIL-VGKMKGHVLELANQMYACRVVQKALE-------HALT-EQQAAMV 616
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHVI++ + + P + + ++E N L+ + GC ++Q +
Sbjct: 617 KELEKDVLKTVKDQNGNHVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLL 676
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
QE Q+ ++ ++ A L YGNYV Q+++ +P+ A +V+ + ++ S
Sbjct: 677 EKVQEPQRRFILTELHAEGSKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSK 736
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
K +SNVV++CL+ + Q ++ ++ E ++ L+ D YGNYVIQ D
Sbjct: 737 HKFASNVVERCLICGDDAQRRELVAVVLSKNERGETNVMNLLRDGYGNYVIQKLLDT 793
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 821 LRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 880
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 881 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVISE----MV 931
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P ++E L+T GC ++Q
Sbjct: 932 RELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRIL 991
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L + + +VA++ G
Sbjct: 992 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1047
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1048 GLSQHKFASNVVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMID 1107
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1108 VAEPTQ-RKIVMHKIRPHISTLRKYTYGKHILAKL 1141
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E++ + LM N++IQK
Sbjct: 384 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKF 443
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 444 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 492
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 493 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRIL 552
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 553 EHCTAEQTQPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 612
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 613 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 672
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 673 KK-LMTKIRPHMAALRKYTYGKHINAKL 699
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 387 LTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 446
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 447 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 506
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+ I++E
Sbjct: 507 NGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTQPILDE 566
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E LI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 567 LHEHTE--NLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 623
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 624 VTHATRGERTGLIDEVCTF 642
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 173/339 (51%), Gaps = 17/339 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + ++ +I + D+ G RF+Q+K++ + I E+I H LM
Sbjct: 681 NNKTRSFELSDIVDHVIEFSTDQYGSRFIQQKLETATVDEKIKIFPEIIPHSHTLMTDVF 740
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q L + +L + + G RV+QK L+ +
Sbjct: 741 GNYVIQKFFEHGTESQRQALASELTG---HILPLSLQMYGCRVIQKALEV--------VD 789
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++Q+ +V+ L + + +GNHVI++C++ P D + ++ + L+T G
Sbjct: 790 VDRQTQMVAELDGSVMKCVRDQNGNHVIQKCIECVPQDRIQFIISSFYGQVVSLSTHPYG 849
Query: 412 CCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + + ++I D ++ + +L+ YGNYV+Q++L P + ++++L
Sbjct: 850 CRVIQRVLEHCDDSSTQQIIMDEIMQSVCILAHDQYGNYVIQHVLQYGKPHERSAIISKL 909
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP---EIVQLIL-DPYGNYVIQ 526
AG+ +S K +SNVV+KCL G E+ ++ E++ E +Q+++ DP+GNYV+Q
Sbjct: 910 AGQIVKMSQQKFASNVVEKCLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQ 969
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ + + + L+ + YGK+++++V
Sbjct: 970 KVIETCD-DQTRELILSRIKVHLNTLKRYTYGKHIVSRV 1007
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 164/331 (49%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I L + + D+ G RF+Q+K++ P + + E++ +LM N++IQK
Sbjct: 518 ITNLSKILFPFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 577
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q +L ++ +++ + + G RV+QK LD E R +L +E ++
Sbjct: 578 FEYGNSTQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVM 634
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+++ +GNHVI++C++ P D +L L+ GC ++Q +
Sbjct: 635 RCVRD--------QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLL 686
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + R I + ++ + VLS+ YGNYV Q++L + + +L+G LS
Sbjct: 687 ERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLS 746
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
L K +SNV++KCL G + II EI E ++ ++ D YGNYV+Q ++
Sbjct: 747 LHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTA 806
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R TL+ V ++ L+ + YGK++++++
Sbjct: 807 DQ-RLTLFSRVRMHASALKKYTYGKHIVSRL 836
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+++ L I S HG+ I++ L+ P+ + EI + L TD G ++Q
Sbjct: 517 MITNLSKILFPFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQK 576
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
Q+ L ++ LS YG V+Q L + P + +L G+
Sbjct: 577 FFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRC 636
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+ ++V+QKC +E+ G + R ++ L + PYG VIQ
Sbjct: 637 VRDQNGNHVIQKC-IENIPADKVGFMLYAFRG-QVSSLSMHPYGCRVIQ 683
>gi|300706085|ref|XP_002995351.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
gi|239604391|gb|EEQ81680.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
Length = 512
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 171/336 (50%), Gaps = 28/336 (8%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S+ L+ + ++KD++G R +Q ++D +I S++ D +++L + N++IQ
Sbjct: 195 STTSSLKEFCVFMSKDQEGSRLIQNRIDISTENEIAWFFSQIEDSIYDLSSNLFGNYVIQ 254
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K++ +LNE Q + S R+ + G RV+QKL+D E
Sbjct: 255 KILPLLNESQKFTVFTEFKS---RIYDLSLHPYGCRVIQKLMDCFECI----------DF 301
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI-AENCLDLATDRSGCCLLQ 416
++ +K L + +GNHVI++ ++K P K+L+ ++ ++ + L+T R GC ++Q
Sbjct: 302 IIEEIKQDIFCLIEDQNGNHVIQKYIEKSPD---KNLIIDVFKKDPIFLSTHRYGCRVIQ 358
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ E +++ +++N L YGNYV+Q++L + V++Q+ +
Sbjct: 359 RLLEFCVEADVKKILQILISNLESLVNDQYGNYVIQHMLTISDDSERNAVISQIINNCYN 418
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLILDPYGNYVIQTAWDV- 531
LS K SSNV+++C++ S EQ +N+ + P I + D YGNYV+Q +D
Sbjct: 419 LSKFKFSSNVIEQCIVISDHEQKNRFLNKFLEVSGGKPRIFNMCTDMYGNYVVQKFYDTV 478
Query: 532 --SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +IR++L + D L+ + +++L K+
Sbjct: 479 DNASKEKIRKSLKPFLKD----LKRINFARHILYKI 510
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
++ E + RI ++ GCR +QK +D ID I+ E+ D+ L+ Q+ NH+I
Sbjct: 266 FTVFTEFKSRIYDLSLHPYGCRVIQKLMDCFECID--FIIEEIKQDIFCLIEDQNGNHVI 323
Query: 297 QKLIGVLNEEQMTK-LILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
QK I E+ K LI+ V L G RV+Q+LL+ +++ Q
Sbjct: 324 QKYI----EKSPDKNLIIDVFKKDPIFLST--HRYGCRVIQRLLEFCVEADVKKILQ--- 374
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+L+S L+ SL +GN+VI+ L ++ +I NC +L+ + ++
Sbjct: 375 -ILISNLE----SLVNDQYGNYVIQHMLTISDDSERNAVISQIINNCYNLSKFKFSSNVI 429
Query: 416 QYCIPLAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQ 452
+ CI ++ EQK R + + + + YGNYVVQ
Sbjct: 430 EQCIVISDHEQKNRFLNKFLEVSGGKPRIFNMCTDMYGNYVVQ 472
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 171/336 (50%), Gaps = 17/336 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T ++ ++ G + + D+ G RF+Q+K++ + + +M+ E++ + +LM N
Sbjct: 318 KTKKLTLRDITGHAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGN 377
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK ++ Q T L + + ++ + + G RV+QK L EY + +
Sbjct: 378 YVIQKFFEHGSQAQKTVLAKHM---ETHVVSLSLQMYGCRVVQKAL---EY-----VLTD 426
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
QQ+ LV L + K +GNHV+++ +++ P + + +++ + LAT GC
Sbjct: 427 QQAALVRELDGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCR 486
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q +EQ L+ ++ N L + YGNYV+Q+IL + A V++++ G
Sbjct: 487 VIQRVFEHCPKEQTIHLLEELNRNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVKGH 546
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEI-IRHPE----IVQLILDPYGNYVIQTA 528
LS K +SNVV+KC+ + +I E+ + P+ ++ ++ D Y NYV+Q
Sbjct: 547 VLQLSKHKFASNVVEKCVAYGNPQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKM 606
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
DV G + R L + + L+ + YGK+++ K
Sbjct: 607 LDVVDGSQ-RDLLIAKIKPHLQGLKKYTYGKHLIHK 641
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL G ++ KD+ G +QK ++ ++ I+ + ++ L H +IQ++
Sbjct: 432 VRELDGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRV 491
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ L+ + + +L++ D G+ V+Q +L+ GE + ++L++
Sbjct: 492 FEHCPKEQTIHLLEELNRNTSQLVQ---DQYGNYVIQHILEHGE--------AKDKALVI 540
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI-------AENCLDLATDRSGC 412
S +K + LSK ++V+++C+ P ++L+EE+ + + D+
Sbjct: 541 SKVKGHVLQLSKHKFASNVVEKCVAYGNPQDRQELIEEVLLTRPDGTYPLMSMMKDQYAN 600
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL 457
++Q + + Q+ LIA + + L +++YG +++ L +
Sbjct: 601 YVVQKMLDVVDGSQRDLLIAKIKPHLQGLKKYTYGKHLIHKNLSI 645
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 3/215 (1%)
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
T + + L + + V S HG+ I++ L+ + + + EEI N L L TD
Sbjct: 316 TNKTKKLTLRDITGHAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVF 375
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
G ++Q + QK L + + LS YG VVQ L + A +V +L
Sbjct: 376 GNYVIQKFFEHGSQAQKTVLAKHMETHVVSLSLQMYGCRVVQKALEYVLTDQQAALVREL 435
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWD 530
G + ++VVQK + II+ I H ++ L PYG VIQ ++
Sbjct: 436 DGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIID--ILHGQVYHLATHPYGCRVIQRVFE 493
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ L +L + S +Q YG V+ +
Sbjct: 494 HCPKEQTIHLLEELNRNTSQLVQDQ-YGNYVIQHI 527
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 208/429 (48%), Gaps = 40/429 (9%)
Query: 150 SGFDLQSGFEGLNIDGLGLPRPNNLTVQRNLVAATN---RYATTN-NASPSYSNLSHGFL 205
+GF L + G + G LP NL+A + R++ N SP NLS G +
Sbjct: 577 TGFGLGMSYSGSPLGGPVLP---------NLLAGSGGPVRHSERNMRFSPGMRNLSGGVM 627
Query: 206 -SDHHHLGSSTNAS---SRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQ 261
S H GS+ + S S + F + ++T + E+ G ++ + D+ G RF+Q
Sbjct: 628 GSWHSEAGSNLDESFPSSLLDEFKS------NKTKCFELSEIAGHVVEFSADQYGSRFIQ 681
Query: 262 KKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR 321
+K++ + M+ E++ LM N++IQK + Q+ +L +
Sbjct: 682 QKLETATAEENNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSASQIRELADQLTG---H 738
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+L + + G RV+QK ++ E +QQ+ +V+ L + + +GNHVI++
Sbjct: 739 VLTLSLQMYGCRVIQKAIEVVEL--------DQQTKMVTELNGHILRCVRDQNGNHVIQK 790
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANAYV 440
C++ P D + ++ + + L+T GC ++Q + + + R++ D ++ + +
Sbjct: 791 CIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDTKTQRIMMDEILQSVCM 850
Query: 441 LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQST 500
L++ YGNYVVQ++L P + ++ +L G+ +S K +SNV++KCL +
Sbjct: 851 LAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAERQ 910
Query: 501 GIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+++E++ + + ++ D + NYV+Q + +++ L + V + L+ +
Sbjct: 911 ALVDEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQLGLILSRIKVHLNA-LKKYT 969
Query: 557 YGKNVLAKV 565
YGK+++ +V
Sbjct: 970 YGKHIVLRV 978
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 178/358 (49%), Gaps = 16/358 (4%)
Query: 212 GSSTNASSRYNNFYARARHHHHRTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNP 269
G + N S + +R + S++ +L I+ ++D+ G RF+Q+K++ +
Sbjct: 231 GGAANISDKNAGGRSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASA 290
Query: 270 IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDL 329
+ +++ E++ + LM N++IQK EQ + L V + +L + +
Sbjct: 291 SEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPEQKSTLAQKV---RGHVLPLALQM 347
Query: 330 SGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD 389
G RV+QK L++ + EQQ +V L + K +GNHV+++C++ P
Sbjct: 348 YGCRVIQKALES--------IGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPR 399
Query: 390 YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+ ++ L+T GC ++Q + EQ ++ ++ A+ L + YGNY
Sbjct: 400 ALQFVIGAFTGQVFALSTHPYGCRVIQRILEHCTPEQTQGILQELHASTDQLIQDQYGNY 459
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
V+Q++L P+ A +++ + G+ ALS K +SNVV+KC+ + ++ +I E+
Sbjct: 460 VIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVTHATRQERAILIEEVCGF 519
Query: 510 PE--IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + ++ D Y NYV+Q DV++ + R+ L + + L+ + YGK+++ K+
Sbjct: 520 NDNALNVMMKDQYANYVVQKMIDVAEPAQ-RKVLMHKIRPHLGSLRKYTYGKHIIVKL 576
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 179/357 (50%), Gaps = 43/357 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 833 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 892
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL-- 357
+ +Q L + + +L + + G RV+QK L++ ++ +QQ +
Sbjct: 893 FEFGSPDQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQVIGD 941
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC----- 412
+V L + K +GNHV+++C++ P + +++ L+T GC
Sbjct: 942 IVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQR 1001
Query: 413 ----CLLQYCIPLAQE--------EQKARLIA-DVVANAY------VLSEHSYGNYVVQY 453
C + +P+ +E QK + ++ ++ Y L + YGNYV+Q+
Sbjct: 1002 ILEHCTQEQTLPILEELHQHSEQLGQKYQAVSLEMTPKTYYTVSRDALFKDQYGNYVIQH 1061
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----R 508
+L P+ + +VA++ G+ ALS K +SNVV+KC++ S + +I+E+
Sbjct: 1062 VLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP 1121
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
H + ++ D Y NYV+Q D+++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1122 HSALYTMMKDQYANYVVQRMIDMAEPAQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1177
>gi|367049768|ref|XP_003655263.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
gi|347002527|gb|AEO68927.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
Length = 916
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 151/291 (51%), Gaps = 15/291 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ + D+ G RF+Q+K++ N + + + E+ + LM+ N++IQK
Sbjct: 509 LKDIAGHVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKF 568
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K +L + + + +++ + + RV+QK L + + EQQ+ LV
Sbjct: 569 F--EHGDQIQKKVL-LRAMKGKVMDLSMQMYACRVVQKAL--------ENVLVEQQAELV 617
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ V ++ PHGNHV+++ + P + ++ +LA+ + C ++Q +
Sbjct: 618 KELEADVVKVATDPHGNHVVQQAIALVPRQHIGFIIGAFKGRVCELASQQYACRVIQRIL 677
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E KA + ++ +A L +H YGNYV+Q++L + + ++ + ALS
Sbjct: 678 EHGTEADKAAVTQELHKSAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADLVALSK 737
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQ 526
KC+SNVV+KC+ E+ I + ++ E + QL D YGNYV+Q
Sbjct: 738 SKCASNVVEKCIAFGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQ 788
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++G+++ ++ CR +QK ++ ++ E+ D+ ++ NH++Q+
Sbjct: 581 LRAMKGKVMDLSMQMYACRVVQKALENVLVEQQAELVKELEADVVKVATDPHGNHVVQQA 640
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I ++ + + +I + + R+ + RV+Q++L+ G + +TQE
Sbjct: 641 IALVPRQHIGFIIGAF---KGRVCELASQQYACRVIQRILEHGTEADKAAVTQE------ 691
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L +L K P+GN+VI+ L + +++ + + + L+ + +++ CI
Sbjct: 692 --LHKSAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADLVALSKSKCASNVVEKCI 749
Query: 420 PLA-QEEQKA---RLIADVVANA--YVLSEHSYGNYVVQYILGLKIPQ 461
+EEQ+A RL+AD N + L++ YGNYVVQ ++ L + Q
Sbjct: 750 AFGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQKLIALPVDQ 797
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L++IA + ++ ++D+SG +Q + A ++K ++ ++ NA L + +GNYV+Q
Sbjct: 509 LKDIAGHVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKF 568
Query: 455 L--GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
G +I + ++ + G+ LS+ + VVQK L EQ ++ E+ ++
Sbjct: 569 FEHGDQIQKKV--LLRAMKGKVMDLSMQMYACRVVQKALENVLVEQQAELVKEL--EADV 624
Query: 513 VQLILDPYGNYVIQTA 528
V++ DP+GN+V+Q A
Sbjct: 625 VKVATDPHGNHVVQQA 640
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 19 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 78
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 79 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 127
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 128 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 187
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 188 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 243
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 244 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 303
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 304 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 337
>gi|189195550|ref|XP_001934113.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979992|gb|EDU46618.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 891
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++ ++ A D+ G RF+Q+K++ N E + E+ ++ +LM+ N++IQK
Sbjct: 509 LTDIKDHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 568
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K IL V + +L + + + RV+QK L+ LT EQQ+ +V
Sbjct: 569 F--EHGDQVQKKIL-VGKMKGHVLELANQMYACRVVQKALE-------HALT-EQQAAMV 617
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHVI++ + + P + + ++E N L+ + GC ++Q +
Sbjct: 618 KELEKDVLKTVKDQNGNHVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLL 677
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
QE Q+ ++ ++ A L YGNYV Q+++ +P+ A +V+ + ++ S
Sbjct: 678 EKVQEPQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSK 737
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
K +SNVV++CL+ + Q ++ ++ E ++ L+ D YGNYVIQ D
Sbjct: 738 HKFASNVVERCLICGDDAQRRQLVAVVLSKNERGETNVMNLLRDGYGNYVIQKLLDT 794
>gi|71983283|ref|NP_495523.3| Protein PUF-8 [Caenorhabditis elegans]
gi|351065107|emb|CCD66262.1| Protein PUF-8 [Caenorhabditis elegans]
Length = 535
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKV-DERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+ ++RG ++ AKD+ G RF+Q+++ ++ + + I EV+ + EL+ N+++QK
Sbjct: 192 LSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQK 251
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
E +L+ +++ R+ + RV+QK L+ ++ + Q +
Sbjct: 252 FFEYGEERHWARLVDAIID---RVPEYAFQMYACRVLQKALE--------KINEPLQIKI 300
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK---DLLEEIAENCLDLATDRSGCCLL 415
+S ++++ K +GNHV+++ ++K P Y + D L E + +++ D GC ++
Sbjct: 301 LSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVV 360
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q C+ Q +I + ++ + YGNYVVQ+++ + +V +++ F
Sbjct: 361 QRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLF 420
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-----PEIVQLILDPYGNYVIQTAWD 530
+ K SSNV++KCL + + I+ H P +VQ++ D Y NYV+Q +D
Sbjct: 421 EFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFD 480
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L V + P L+ +GK++LAK+
Sbjct: 481 QVTSEQ-RRELILTVRPHIPVLRQFPHGKHILAKL 514
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I ++ R +A ++ G +Q ++ + D +I++ V ++L E H+ ++++I+K
Sbjct: 376 IGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKC 435
Query: 300 I--GVLNEEQMTKLILSVVSSQQR-----LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
+ G + + M I+ Q ++++ D + V+QK+ D Q+T
Sbjct: 436 LEQGAVYHKSM---IVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFD--------QVTS 484
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKF 386
EQ+ L+ ++ L + PHG H++ + + F
Sbjct: 485 EQRRELILTVRPHIPVLRQFPHGKHILAKLEKYF 518
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 166/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ E++ + LM N++IQK
Sbjct: 876 LRDLTNHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKF 935
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 936 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------IGPEQQQEIV 984
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 985 RELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRIL 1044
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ A L + YGNYV+Q++L P+ +++ + G+ LS
Sbjct: 1045 EHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQ 1104
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + ++ +I E+ + + ++ D Y NYV+Q DV++ +
Sbjct: 1105 HKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQ- 1163
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK+++ K+
Sbjct: 1164 RKVLMHKIRPHLGSLRKYTYGKHIIVKLE 1192
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 39/252 (15%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
SL + L N V S+ HG+ I++ L++ + + +EI + L TD G ++
Sbjct: 873 SLQLRDLTNHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVI 932
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q EQK+ L V + L+ YG V+Q L P+ ++V +L G
Sbjct: 933 QKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVL 992
Query: 476 ALSLGKCSSNVVQKCL-------------LESGE-----------------------EQS 499
+ ++VVQKC+ +G+ EQ+
Sbjct: 993 KCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQT 1052
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGK 559
GI+ E+ H QLI D YGNYVIQ + + Q L V L H +
Sbjct: 1053 QGILQEL--HAATDQLIQDQYGNYVIQHVLEHGKPEDKTQ-LISSVRGKVLTLSQHKFAS 1109
Query: 560 NVLAKVRGNKNR 571
NV+ K + R
Sbjct: 1110 NVVEKCVTHATR 1121
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 820 LRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKF 879
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 880 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVISE----MV 930
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P ++E L+T GC ++Q
Sbjct: 931 RELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRIL 990
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L + + +VA++ G
Sbjct: 991 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1046
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1047 GLSQHKFASNVVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMID 1106
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1107 VAEPTQ-RKIVMHKIRPHISTLRKYTYGKHILAKL 1140
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 19 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 78
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 79 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 127
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 128 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 187
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 188 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 243
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 244 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 303
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 304 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 337
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E++ + LM N++IQK
Sbjct: 385 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKF 444
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ +QQ +V
Sbjct: 445 FEFGTPEQKNNLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPDQQQEIV 493
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 494 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRIL 553
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 554 EHCTAEQTTPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 613
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 614 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 673
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L + + L+ + YGK++ AK+
Sbjct: 674 KK-LMTKIRPHMAALRKYTYGKHINAKL 700
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 388 LTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 447
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P ++V +L G +
Sbjct: 448 GTPEQKNNLGMQVKGHVLQLALQMYGCRVIQKALESISPDQQQEIVHELDGHVLKCVKDQ 507
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 508 NGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 567
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK- 564
+ H E LI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 568 LHEHTE--NLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 624
Query: 565 ----VRGNKNRFHNRVAMW 579
RG + + V +
Sbjct: 625 VTHATRGERTGLIDEVCTF 643
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 824 LRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKF 883
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 884 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVISE----MV 934
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P ++E L+T GC ++Q
Sbjct: 935 RELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRIL 994
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L + + +VA++ G
Sbjct: 995 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1050
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1051 GLSQHKFASNVVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMID 1110
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1111 VAEPTQ-RKIVMHKIRPHISTLRKYTYGKHILAKL 1144
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 175/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ +E++ LM
Sbjct: 654 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFG 713
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK + Q+ +L + +L + + G RV+QK ++ E
Sbjct: 714 NYVIQKFFEHGSAAQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVEL-------- 762
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+QQ+ +V+ L + + +GNHVI++C++ P D + ++ + + L+T GC
Sbjct: 763 DQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGC 822
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + R++ D ++ + +L++ YGNYVVQ++L P + ++ +L
Sbjct: 823 RVIQRVLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLT 882
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQT 527
G+ +S K +SNV++KCL + ++NE++ E +Q+++ D + NYV+Q
Sbjct: 883 GQIVQMSQQKFASNVIEKCLTFGTPAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQK 942
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +++ L + V + L+ + YGK+++A+V
Sbjct: 943 VLETCDDQQLELILNRIKVHLNA-LKKYTYGKHIVARV 979
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 173/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + +++ +E++ ++LM N++IQK
Sbjct: 22 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 81
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 82 FEFGSHEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVINE----MV 132
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 133 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 192
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 193 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 248
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 249 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 308
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 309 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 342
>gi|308510969|ref|XP_003117667.1| CRE-PUF-9 protein [Caenorhabditis remanei]
gi|308238313|gb|EFO82265.1| CRE-PUF-9 protein [Caenorhabditis remanei]
Length = 714
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 180/351 (51%), Gaps = 28/351 (7%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R + S ++++++ +I AKD+ G RF+Q+K++ + D +I + V++ EL
Sbjct: 342 RGPEDPNGQSPRTLQDIKNNVIEFAKDQHGSRFIQQKLERASIRDKAVIFTPVLEHAEEL 401
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N++IQK N EQ L+ ++ + ++++ + G RV+QK L+ E
Sbjct: 402 MTDVFGNYVIQKFFEFGNNEQRNLLVGTIRGN---VMKLALQMYGCRVIQKALEYVEEKY 458
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD-- 404
+ ++ E + ++ +K+ +GNHVI++ +++ PD + +++ +N D
Sbjct: 459 QHEILGEMEGQVLKCVKDQ--------NGNHVIQKVIERVEPDRLQFIIDAFTKNNSDNV 510
Query: 405 --LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP-- 460
L+ GC ++Q + +EQK ++ + + L YGNYV+Q+++ P
Sbjct: 511 YTLSVHPYGCRVIQRVLEYCNDEQKQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSPKD 570
Query: 461 --QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IV 513
Q+ DV+ +Y + K +SNV++KCL G+ + II+++ P ++
Sbjct: 571 KEQIVQDVINDDLLKY---AQHKFASNVIEKCLTFGGDAERNIIIDKVCGDPNDPSPPLL 627
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
Q++ DP+ NYV+Q DV+ + R+ + + + L+ + +GK++L K
Sbjct: 628 QMMKDPFANYVVQKMLDVADPQH-RKKITLTIKPHIATLRKYNFGKHILRK 677
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ SE++ + LM N++IQK
Sbjct: 773 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 832
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 833 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------VGGEQQVEIV 881
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L L+T GC ++Q +
Sbjct: 882 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRIL 941
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 942 EHCTSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQ 1001
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + + +I E+ + + ++ D Y NYV+Q DV + +
Sbjct: 1002 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ- 1060
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK++++K+
Sbjct: 1061 RKVLMHKIRPHFASLRKYTYGKHIISKLE 1089
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 39/248 (15%)
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E SL + L N V S+ HG+ I++ L++ + + EI L TD G
Sbjct: 767 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 826
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q EQK+ L V + L+ YG V+Q L + ++V +L G
Sbjct: 827 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 886
Query: 473 RYFALSLGKCSSNVVQKC------------------------------------LLESGE 496
+ ++VVQKC L
Sbjct: 887 HVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTS 946
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
EQ+ I++E+ +H E QLI D YGNYVIQ + + + + L V L H
Sbjct: 947 EQTAPILDEMHQHVE--QLIQDQYGNYVIQHVLEHGK-QEDKSKLICSVRGKVLTLSQHK 1003
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 1004 FASNVVEK 1011
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ SE++ + LM N++IQK
Sbjct: 808 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 867
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 868 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------VGGEQQVEIV 916
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L L+T GC ++Q +
Sbjct: 917 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRIL 976
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 977 EHCTSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQ 1036
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + + +I E+ + + ++ D Y NYV+Q DV + +
Sbjct: 1037 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ- 1095
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK++++K+
Sbjct: 1096 RKVLMHKIRPHFASLRKYTYGKHIISKLE 1124
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 39/248 (15%)
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E SL + L N V S+ HG+ I++ L++ + + EI L TD G
Sbjct: 802 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 861
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q EQK+ L V + L+ YG V+Q L + ++V +L G
Sbjct: 862 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 921
Query: 473 RYFALSLGKCSSNVVQKC------------------------------------LLESGE 496
+ ++VVQKC L
Sbjct: 922 HVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTS 981
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
EQ+ I++E+ +H E QLI D YGNYVIQ + + + + L V L H
Sbjct: 982 EQTAPILDEMHQHVE--QLIQDQYGNYVIQHVLEHGK-QEDKSKLICSVRGKVLTLSQHK 1038
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 1039 FASNVVEK 1046
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 820 LRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 879
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 880 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVISE----MV 930
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P +++ L+T GC ++Q
Sbjct: 931 RELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRIL 990
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L + + +VA++ G
Sbjct: 991 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1046
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1047 GLSQHKFASNVVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMID 1106
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1107 VAEPTQ-RKIVMHKIRPHISTLRKYTYGKHILAKL 1140
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 166/332 (50%), Gaps = 17/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + + ++ EV+ +LM N++IQK
Sbjct: 652 LSDIIGHIVEFSSDQHGSRFIQQKLESCSGEEKALVFKEVLPHASKLMTDVFGNYVIQKF 711
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ +L +V ++L + + G RV+QK L+ E EQ++ LV
Sbjct: 712 FEYGSSEQRRELADRLVG---QILPLSLQMYGCRVIQKALEVIEL--------EQKAQLV 760
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ +L L+ GC ++Q +
Sbjct: 761 HELDGNVMRCVRDQNGNHVIQKCIESIQTKKISFILSAFRGQVATLSMHPYGCRVIQRVL 820
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E + + I D ++ + L++ YGNYV Q++L PQ + ++++L+G LS
Sbjct: 821 EHCMDESQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLS 880
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + ++ EI H + ++ ++ D + NYV+Q D+
Sbjct: 881 QHKFASNVVEKCLEYGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVIDICSE 940
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ R L V ++ L+ + YGK+++A++
Sbjct: 941 NQ-RAMLLSHVRIHAHALKKYTYGKHIVARLE 971
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 123/265 (46%), Gaps = 16/265 (6%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+ L G+I+ ++ GCR +QK ++ ++ E+ ++ +R Q+ NH+IQK I
Sbjct: 725 DRLVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKCI 784
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ ++++ ILS Q L + G RV+Q++L+ + + Q +V
Sbjct: 785 ESIQTKKIS-FILSAFRGQVATLSM--HPYGCRVIQRVLE-------HCMDESQCQFIVD 834
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
+ +L++ +GN+V + L++ P +L +++ + + L+ + +++ C+
Sbjct: 835 EILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEKCLE 894
Query: 421 LAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
++ L+A++ N + + + NYVVQ ++ + A +++ +
Sbjct: 895 YGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVIDICSENQRAMLLSHVRIHA 954
Query: 475 FALSLGKCSSNVVQKCLLESGEEQS 499
AL ++V + + GE Q+
Sbjct: 955 HALKKYTYGKHIVARLEHQFGENQT 979
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 177/357 (49%), Gaps = 43/357 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L GR++ ++D+ G RF+Q+K++ + +M+ E++ ++LM N++IQK
Sbjct: 840 LRDLPGRMVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKF 899
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ--SL 357
+ +Q L + + +L + + G RV+QK L++ ++ +QQ S
Sbjct: 900 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQVISD 948
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 949 IVRELDGHVLKCVKDQNGNHVVQKCIECVQPQAFQFIIDAFQGQVFVLSTHPYGCRVIQR 1008
Query: 418 CIPLAQEEQKARLIADV------------------------VANAYVLSEHSYGNYVVQY 453
+ +EQ ++ ++ ++ L + YGNYV+Q+
Sbjct: 1009 ILEHCTQEQTLPILEELHQHFEQLGQKYQGVSLEMTPQTYYTVSSDALFKDQYGNYVIQH 1068
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----R 508
+L P+ + +VA++ G+ ALS K +SNVV+KC++ S + +I+E+
Sbjct: 1069 VLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP 1128
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
H + ++ D Y NYV+Q D+++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1129 HSALYTMMKDQYANYVVQRMIDMAEPAQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1184
>gi|307102758|gb|EFN51026.1| hypothetical protein CHLNCDRAFT_28462 [Chlorella variabilis]
Length = 393
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 169/337 (50%), Gaps = 19/337 (5%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
T ++S +ELRG++ +D+ G R +Q++++ P ++ + EV L LM N+
Sbjct: 5 TPFASPQELRGQLYPFCRDQHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNY 64
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
++Q+ L + + + L + + G RV+QK L+ L Q+Q
Sbjct: 65 VVQRF---LERGGAEVQAAVAEAIRGKALPLSLQMYGCRVVQKALEV--------LPQQQ 113
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY-TKDLLEEIAENCLDLATDRSGCC 413
+ + L T+ + +GNHV+++C++ P +D++E I L+T GC
Sbjct: 114 RVSICRELTEHTLRCVRDQNGNHVVQKCIECVQPSGPARDMIEIIVNKGQALSTHTFGCR 173
Query: 414 LLQYCIPLAQ-EEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
L+Q + E + ++I+DV+ + LS YGNYVVQ+++ +VA++A
Sbjct: 174 LVQRVLEFCSIAELREKVISDVLDSTLQLSHDQYGNYVVQHLVAKGPGPARESIVAKVAP 233
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-----PEIVQLILDPYGNYVIQT 527
+ L+ K +SNVV+ CL SG+ I++++IR + L+ D YGNYV+Q
Sbjct: 234 QVMTLAQHKYASNVVEACLKHSGQAHRDAIVDQMIRESGARPAALTALMRDQYGNYVVQR 293
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
A +V+ + R L + + L+ + YGK+++ K
Sbjct: 294 ALEVATPPQ-RAALLAAIKPHLDALKKYTYGKHIVTK 329
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 408 DRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
D+ G L+Q + A E+ L +V L +GNYVVQ L +V A V
Sbjct: 23 DQHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNYVVQRFLERGGAEVQAAVA 82
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQT 527
+ G+ LSL VVQK L ++Q I E+ H ++ + D GN+V+Q
Sbjct: 83 EAIRGKALPLSLQMYGCRVVQKALEVLPQQQRVSICRELTEH--TLRCVRDQNGNHVVQK 140
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ Q + + +++V+ L +H +G ++ +V
Sbjct: 141 CIECVQPSGPARDMIEIIVNKGQALSTHTFGCRLVQRV 178
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + +M+ E++ LM
Sbjct: 530 NKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFG 589
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q+ +L + +L + + G RV+QK ++ +
Sbjct: 590 NYVIQKFFEHGTASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEV--------VDL 638
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+QQ+ +V L + + +GNHVI++C++ P D + ++ + + L+T GC
Sbjct: 639 DQQTKMVMELDGNVMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGC 698
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + R++ D ++ + +L++ YGNYVVQ++L P + ++ +LA
Sbjct: 699 RVIQRVLEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELA 758
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL + ++NE++ + + ++ D + NYV+Q
Sbjct: 759 GQIVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQK 818
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +++ L + V + L+ + YGK+++A+V
Sbjct: 819 VLETCDDQQLELILNRIKVHLNA-LKKYTYGKHIVARV 855
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 169/328 (51%), Gaps = 14/328 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E+I + LM N++IQK
Sbjct: 79 LRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKF 138
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L V + +L + + GSRV+QK L++ + EQQ +V
Sbjct: 139 FEFGTTEQKTTLAQKV---RGHVLNLALQMYGSRVIQKALES--------IPPEQQQEVV 187
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 188 RELDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRIL 247
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ A+ L YGNYVVQ++L + + +VA + G+ LS
Sbjct: 248 EHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQ 307
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + +I+E+ + + ++ D + NYV+Q DV++ +
Sbjct: 308 HKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQ- 366
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ L + + L+ + YGK+++AK+
Sbjct: 367 RKVLMHKIRPHIGSLRKYTYGKHIIAKL 394
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 95/246 (38%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 82 LANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEF 141
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG+ V+Q L P+ +VV +L G +
Sbjct: 142 GTTEQKTTLAQKVRGHVLNLALQMYGSRVIQKALESIPPEQQQEVVRELDGHVLKCVKDQ 201
Query: 482 CSSNVVQKCL-------------LESGE-----------------------EQSTGIINE 505
++VVQKC+ +G+ EQ+ ++NE
Sbjct: 202 NGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPVLNE 261
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ H + QLI D YGNYV+Q + G R L V L H + NV+ K
Sbjct: 262 LHAHTD--QLITDQYGNYVVQHVLEHGAGED-RSRLVAAVRGKVLQLSQHKFASNVVEKC 318
Query: 566 RGNKNR 571
+ R
Sbjct: 319 VTHATR 324
>gi|402225601|gb|EJU05662.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 163/312 (52%), Gaps = 18/312 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQS 291
++T + L G + + D+ G RF+Q K+D P + +M+ E++ ++ L+
Sbjct: 28 NKTRKWELRNLFGHVNEFSADQHGSRFIQIKLDTATPEEKQMVFDEILAGNIMPLVTDVF 87
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQKLI E + + ++ Q L + + G RV+QK A EY +T
Sbjct: 88 GNYVIQKLIEFGGETERNAIFEAM---QGHFLILSWHMYGCRVVQK---AIEY-----IT 136
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
EQQS L++ L + K +GNHV+++ +++ PD +E + DL+T G
Sbjct: 137 PEQQSQLIAELAPDIMKCVKDANGNHVVQKLIERVSPDRLT-FVEAFKGSVYDLSTHTYG 195
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
C +LQ C+ EEQ L+ ++ + L + +GNYVVQ++L P+ A V+A+L
Sbjct: 196 CRVLQRCLEHLTEEQTRPLLDELHEHTANLMQDQFGNYVVQFVLEHGQPEDRARVIAKLR 255
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLIL-DPYGNYVIQ 526
G+ ++ K +SNV +K L+ + E +I+E++ VQL++ D + NYV+Q
Sbjct: 256 GQMLMMACHKFASNVCEKALMTADSESRRLLIDELMTPKPNGVSPVQLMMKDQFANYVLQ 315
Query: 527 TAWDVSQGRRIR 538
A V +G +++
Sbjct: 316 RALSVVEGDQLQ 327
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 178/357 (49%), Gaps = 43/357 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 835 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 894
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ--SL 357
+ +Q L + + +L + + G RV+QK L++ ++ +QQ S
Sbjct: 895 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQVISD 943
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC----- 412
+V L + K +GNHV+++C++ P + +++ L+T GC
Sbjct: 944 IVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQR 1003
Query: 413 ----CLLQYCIPLAQE--------EQKARLIA-DVVANAY------VLSEHSYGNYVVQY 453
C + +P+ +E QK + ++ ++ Y L + YGNYV+Q+
Sbjct: 1004 ILEHCTQEQTLPILEELHQHSEQLGQKFQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQH 1063
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----R 508
+L P+ + +VA++ G+ LS K +SNVV+KC++ S + +I+E+
Sbjct: 1064 VLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP 1123
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
H + ++ D Y NYV+Q D+++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1124 HSALYTMMKDQYANYVVQRMIDMAEPAQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1179
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + +M+ E++ LM
Sbjct: 671 NKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFG 730
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q+ +L + +L + + G RV+QK ++ +
Sbjct: 731 NYVIQKFFEHGTASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEV--------VDL 779
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+QQ+ +V L + + +GNHVI++C++ P D + ++ + + L+T GC
Sbjct: 780 DQQTKMVMELDGNVMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGC 839
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + R++ D ++ + +L++ YGNYVVQ++L P + ++ +LA
Sbjct: 840 RVIQRVLEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELA 899
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL + ++NE++ + + ++ D + NYV+Q
Sbjct: 900 GQIVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQK 959
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +++ L + V + L+ + YGK+++A+V
Sbjct: 960 VLETCDDQQLELILNRIKVHLNA-LKKYTYGKHIVARV 996
>gi|429961553|gb|ELA41098.1| hypothetical protein VICG_01891 [Vittaforma corneae ATCC 50505]
Length = 467
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 155/310 (50%), Gaps = 23/310 (7%)
Query: 229 RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR 288
+ + + S +L I V KD++G R++Q +D N I + ++D EL
Sbjct: 142 KDFYLKCGLGSSTDLSDICITVCKDQEGSRYIQGLMDTWNADQISLFFDRIVDSSFELSM 201
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
+ N++IQK+I +LNE Q+ LIL + + + G RV+QKL+D
Sbjct: 202 NLFGNYVIQKIIPLLNESQIFSLILQFFG---HIYELSLHVYGCRVVQKLIDN------- 251
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKD-LLEEIAENCLDLAT 407
++ +S +V+ L++ L +SP+GNHVI+RC+ K D K LL+E +N + LA
Sbjct: 252 --LRDVKS-VVAELESHIPELIESPNGNHVIQRCIDK---DIDKRFLLKEFEKNGVGLAQ 305
Query: 408 DRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
R GC +LQ + EE+ + ++ N +L YGNYV+Q+ + + +
Sbjct: 306 QRYGCRVLQRLFEVCSEEETWSIYLQIIKNIDILINDKYGNYVIQHFIESS-NKHKDQIF 364
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGN 522
+ + F LS K SSN V+KC+ +EQ + E + P + + +D Y N
Sbjct: 365 SFIIKNSFDLSKDKFSSNAVEKCVNNCSKEQLESLFKEFSKVHENSRPCLYYMCIDMYAN 424
Query: 523 YVIQTAWDVS 532
YV+Q +DV+
Sbjct: 425 YVVQRFFDVA 434
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
++++ C+ + D+ G +Q + +Q + +V +++ LS + +GNYV+Q I+
Sbjct: 155 DLSDICITVCKDQEGSRYIQGLMDTWNADQISLFFDRIVDSSFELSMNLFGNYVIQKIIP 214
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
L ++ Q G + LSL VVQK + + +S ++ E+ H I +LI
Sbjct: 215 LLNESQIFSLILQFFGHIYELSLHVYGCRVVQKLIDNLRDVKS--VVAELESH--IPELI 270
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
P GN+VIQ D +R ++ N L YG VL ++
Sbjct: 271 ESPNGNHVIQRCIDKDIDKRFLLKEFE---KNGVGLAQQRYGCRVLQRL 316
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 168/329 (51%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+L ++ + D+ G RF+Q+K++ P + + +EV+ H+L+ N+++QK +
Sbjct: 437 DLADHVVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKFLE 496
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+EQ L + + +L + + G RV+QK L+ + QQ+ +V+
Sbjct: 497 YGTDEQRRLLAGEL---KDHVLSLSLQMYGCRVIQKALEV--------FDEAQQTAMVNE 545
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + + +GNHVI++C+++ PP + ++ N L L+T GC ++Q +
Sbjct: 546 LDGHVLRCVRDQNGNHVIQKCIERVPPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEH 605
Query: 422 AQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
EQK I D ++ A L++ YGNYVVQ++L ++A LAG+ L+
Sbjct: 606 CTPEQKTEGIMDEILREAVQLAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQH 665
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
K +SNV++KCL G E+ +I E++ + + ++ D + NYV+Q +V
Sbjct: 666 KFASNVIEKCLTYCGAEERQIMITEMLGTTDENEPLQAMMKDQFANYVVQKLLEVCDEGE 725
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q L + V + P L+ YGK+++A+V
Sbjct: 726 REQLLSRMQV-HLPNLKKFTYGKHIVARV 753
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L ++A++ ++ ++D+ G +Q + A+ E+ A + A+V+ +A+ L +GNYVVQ
Sbjct: 435 LPDLADHVVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKF 494
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L + + +L +LSL V+QK L E Q T ++NE+ H +++
Sbjct: 495 LEYGTDEQRRLLAGELKDHVLSLSLQMYGCRVIQKALEVFDEAQQTAMVNELDGH--VLR 552
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D GN+VIQ + RI Q + N L +H YG V+ +V
Sbjct: 553 CVRDQNGNHVIQKCIERVPPARI-QFIVSSFYGNVLSLSTHPYGCRVIQRV 602
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 190/393 (48%), Gaps = 28/393 (7%)
Query: 178 RNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSY 237
RN +N + + ++ PS + ++ LS T S +F ++R
Sbjct: 620 RNNPVGSNGFFSGSSLFPSRNMITRSSLSKE-----GTGRSRLLEDF------RNNRIPN 668
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
+++L ++ ++D+ G RF+Q+K++ +P + ++ +E++ + LM N++IQ
Sbjct: 669 LQLKDLNNHVVEFSQDQHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQ 728
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K + EQ L + + +L + + G RV+QK L+ + + Q
Sbjct: 729 KFFEFGSNEQKQTLAQRL---RGHVLPLALQMYGCRVIQKALET--------IPSDLQVE 777
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L V K +GNHV+++C++ P + + +++ L L+T GC ++Q
Sbjct: 778 IVKELDGHVVKCVKDQNGNHVVQKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQR 837
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ +EQ ++ ++ L + YGNYVVQ++L + +VA++ G+ L
Sbjct: 838 ILEHCTKEQITPILEELHQTTERLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVL 897
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-----LILDPYGNYVIQTAWDVS 532
S K +SNVV+KC+ S + +I E+ + Q ++ D + NYV+Q DV+
Sbjct: 898 SQHKFASNVVEKCVSYSSRAEKAMLIEEVCALTDGPQSALYIMMKDQFANYVVQKMIDVA 957
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R L + + L+ + YGK++LAK+
Sbjct: 958 EPKQ-RNILMHKIRPHIATLRKYTYGKHILAKL 989
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 172/335 (51%), Gaps = 23/335 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 817 LREIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 876
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q L + + +L + + G RV+QK L+ P+ QQ+ E +V
Sbjct: 877 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVISE----MV 927
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P +++ L+T GC ++Q
Sbjct: 928 RELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRIL 987
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L + + +VA++ G
Sbjct: 988 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1043
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1044 GLSQHKFASNVVEKCVSHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMID 1103
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1104 VAEPTQ-RKIVMHKIRPHISTLRKYTYGKHILAKL 1137
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 176/357 (49%), Gaps = 43/357 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G ++ ++D+ G RF+Q+K++ P + +M+ E++ ++LM N++IQK
Sbjct: 848 LRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKF 907
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ--SL 357
+ +Q L + + +L + + G RV+QK L++ ++ +QQ S
Sbjct: 908 FEFGSADQKLALATRI---RGHVLPLALQMYGCRVIQKALES--------ISSDQQVISD 956
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 957 IVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQR 1016
Query: 418 CIPLAQEEQKARLIADV------VANAY------------------VLSEHSYGNYVVQY 453
+ +EQ ++ ++ + Y L + YGNYV+Q+
Sbjct: 1017 ILEHCTQEQTLPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQH 1076
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII-----R 508
+L P+ + +VA++ G+ LS K +SNVV+KC++ S + +I+E+
Sbjct: 1077 VLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP 1136
Query: 509 HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
H + ++ D Y NYV+Q D+++ + R+ + + + L+ + YGK++LAK+
Sbjct: 1137 HSALYTMMKDQYANYVVQRMIDMAEPAQ-RKIIMHKIRPHIATLRKYTYGKHILAKL 1192
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 171/317 (53%), Gaps = 19/317 (5%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV-LNEEQMTKL 311
D+ G RF+Q K+D N D +++ ++ LM N+++QK + L + +L
Sbjct: 1 DQHGSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLERDLVKNGRNRL 60
Query: 312 ILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSK 371
S+ ++L + D+ G RV+QK ++ E P ++QL +E Q ++ +++
Sbjct: 61 TCSI----PQVLELSLDMYGCRVVQKAIEVIEGPRQEQLVRELQGNVMKCVRD------- 109
Query: 372 SPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLI 431
+GNHVI++C+++ P+ + ++E+ + LA GC ++Q + + +Q A ++
Sbjct: 110 -QNGNHVIQKCIERSAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPIL 168
Query: 432 ADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK-- 489
+++V +A L YGNYVVQ++L Q ++ + G+ A+S K +SNVV+K
Sbjct: 169 SEIVRSAKELVHDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLL 228
Query: 490 -CLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDN 548
LL + ++ TG N+ P ++ ++ D YGNYV+Q A DV +G R L + ++
Sbjct: 229 QVLLVTILDEVTG--NQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVD-RARLIAAIREH 285
Query: 549 SPFLQSHMYGKNVLAKV 565
P ++ YGK+++A +
Sbjct: 286 LPAVRKFTYGKHIIAHI 302
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL+G ++ +D+ G +QK ++ P ++ I+ + I + +L H +IQ++
Sbjct: 96 VRELQGNVMKCVRDQNGNHVIQKCIERSAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRI 155
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ ++ +V S + L+ D G+ V+Q +L+ G R+ + Q+ + +
Sbjct: 156 LEHCKHDQVAPILSEIVRSAKELVH---DQYGNYVVQHVLEHGRGQDREAILQKCEGQI- 211
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN-------CLDLATDRSGC 412
V++S+ ++V+++ LQ +L+E+ N LD+ D G
Sbjct: 212 -------VAMSQHKFASNVVEKLLQVL----LVTILDEVTGNQPSGAPSVLDMMRDAYGN 260
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
++Q + + + +ARLIA + + + + +YG +++ +I
Sbjct: 261 YVVQKALDVCEGVDRARLIAAIREHLPAVRKFTYGKHIIAHI 302
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 155/303 (51%), Gaps = 24/303 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 878 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 937
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 938 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 986
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 987 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 1046
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 1047 EHCLP----DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1102
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 1103 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1162
Query: 531 VSQ 533
V++
Sbjct: 1163 VAE 1165
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 173/339 (51%), Gaps = 25/339 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G + D+ G RF+Q+ + P +I+ ++V+ L +LM N+++QK
Sbjct: 74 LRDILGHFYEFSLDQDGSRFVQENFESLRPEEIDAAFNDVLPHLLQLMTDMFGNYVVQKF 133
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ E ++ ++ Q +L + L G R MQK L+ T++QQ +V
Sbjct: 134 LEHGTPEHRARIANAI---QGNVLSLSLQLFGCRTMQKALEV--------FTEDQQVDIV 182
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S L + +G+HVI++C++ PP ++ LL+ I + L+T GC ++++ +
Sbjct: 183 SELNGHVMRCVCDQNGSHVIQKCIEYVPPHHSAGLLDNIVTCVVPLSTHLHGCRIIRHIL 242
Query: 420 PLAQEEQK-ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+++++ A ++AD++ A L++ YGNYV+Q++L P+ + ++ L+ LS
Sbjct: 243 KYVRDQRRRAAVMADILGAAVQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLS 302
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-VQL-----------ILDPYGNYVIQ 526
+ K +SNV++KCL+ IIN ++ + +QL + +P+GNYV+Q
Sbjct: 303 MHKFASNVIEKCLIHGSTADRDLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQ 362
Query: 527 TAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+V + R+ + V L+ Y ++V+A+V
Sbjct: 363 KVLEVCTDEQ-REAMLARVRMQLHELKHFHYSRHVVARV 400
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G ++ + D+ G RF+Q+K++ + M+ EV+ LM N++IQK
Sbjct: 17 LSDIVGHVVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKF 76
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N +Q +L +V +L + + G RV+QK L+ + +QQ+ LV
Sbjct: 77 FEHGNSQQRRELANLLVG---HMLELSLQMYGCRVIQKALEVCDV--------DQQTQLV 125
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ PPD + ++ L L+T GC ++Q +
Sbjct: 126 VELDGHVMRCVRDQNGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVL 185
Query: 420 PLAQEEQK-ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
++QK A ++ +++ L++ YGNYV+Q++L P ++++ +LAG+ +S
Sbjct: 186 EHCTDDQKQAGIMEEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMS 245
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL G + +++E++ + + ++ D + NYV+Q +
Sbjct: 246 QHKFASNVVEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSD 305
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ L + + L+ + YGK+++A+V
Sbjct: 306 QQ-REMLLGRIKVHLHALKKYTYGKHIVARV 335
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 167/329 (50%), Gaps = 14/329 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + + +++ SE++ + LM N++IQK
Sbjct: 640 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 699
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ + L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 700 FEFGTPEQKSTLAQKV---RGHVLPLALQMYGCRVIQKALES--------VGGEQQVEIV 748
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L L+T GC ++Q +
Sbjct: 749 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRIL 808
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 809 EHCTSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQ 868
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + + +I E+ + + ++ D Y NYV+Q DV + +
Sbjct: 869 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQ- 927
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
R+ L + + L+ + YGK++++K+
Sbjct: 928 RKVLMHKIRPHFASLRKYTYGKHIISKLE 956
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 39/248 (15%)
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E SL + L N V S+ HG+ I++ L++ + + EI L TD G
Sbjct: 634 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 693
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q EQK+ L V + L+ YG V+Q L + ++V +L G
Sbjct: 694 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 753
Query: 473 RYFALSLGKCSSNVVQKC------------------------------------LLESGE 496
+ ++VVQKC L
Sbjct: 754 HVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTS 813
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
EQ+ I++E+ +H E QLI D YGNYVIQ + + + + L V L H
Sbjct: 814 EQTAPILDEMHQHVE--QLIQDQYGNYVIQHVLEHGK-QEDKSKLICSVRGKVLTLSQHK 870
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 871 FASNVVEK 878
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 175/340 (51%), Gaps = 24/340 (7%)
Query: 234 RTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
R S+E +L G + ++ D+ G RF+Q+K++ + D E I E++ + L
Sbjct: 298 RNGADSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVF 357
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q+ +L + + +L + + G RV+QK+L+ +
Sbjct: 358 GNYVIQKFFEFATERQLIQLADQL---KGHILELSLQMYGCRVVQKVLEV--------VD 406
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++++ +V L+N + +GNHVI++C++ P D +++ I L L T + G
Sbjct: 407 KDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYG 466
Query: 412 CCLLQYCI-----PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
C ++Q + P+ Q + + ++V + L++ +GNYVVQ++L P+ + +
Sbjct: 467 CRVIQRVLEHCHDPVTQ----SATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAI 522
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVI 525
+ +L+G+ LS K +SNV++KCL E+ +I EII + Q L+ D +GNYV+
Sbjct: 523 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 582
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q R + L + + + L+++ YGK+++ +V
Sbjct: 583 QKVLKTCDERYLEMILSSIKLHLNE-LKNYTYGKHIVTRV 621
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 55/275 (20%)
Query: 241 EELRGRIILVAKDEQGCRFLQKK---VDERNPIDIEMILSEVIDDLHELMRH-------Q 290
++L+G I+ ++ GCR +QK VD+ IDI +HEL H Q
Sbjct: 379 DQLKGHILELSLQMYGCRVVQKVLEVVDKDRKIDI----------VHELRNHILKCIGDQ 428
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
+ NH+IQK I + E+++ +I ++S ++L +C G RV+Q++L+ P Q
Sbjct: 429 NGNHVIQKCIECVPEDRIPFVIDPILS---QILVLCTHQYGCRVIQRVLEHCHDPVTQSA 485
Query: 351 TQ-----------------------------EQQSLLVSALKNITVSLSKSPHGNHVIKR 381
T E++S ++ L V LSK + ++VI++
Sbjct: 486 TMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEK 545
Query: 382 CLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA 438
CL+ + L+ EI + +L D+ G ++Q + E +++ + +
Sbjct: 546 CLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHL 605
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
L ++YG ++V + L + +A L+G+
Sbjct: 606 NELKNYTYGKHIVTRVEKLIVTGEERARMASLSGQ 640
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 175/340 (51%), Gaps = 24/340 (7%)
Query: 234 RTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
R S+E +L G + ++ D+ G RF+Q+K++ + D E I E++ + L
Sbjct: 298 RNGADSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVF 357
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q+ +L + + +L + + G RV+QK+L+ +
Sbjct: 358 GNYVIQKFFEFATERQLIQLADQL---KGHILELSLQMYGCRVVQKVLEV--------VD 406
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++++ +V L+N + +GNHVI++C++ P D +++ I L L T + G
Sbjct: 407 KDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYG 466
Query: 412 CCLLQYCI-----PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
C ++Q + P+ Q + + ++V + L++ +GNYVVQ++L P+ + +
Sbjct: 467 CRVIQRVLEHCHDPVTQ----SATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAI 522
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVI 525
+ +L+G+ LS K +SNV++KCL E+ +I EII + Q L+ D +GNYV+
Sbjct: 523 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 582
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q R + L + + + L+++ YGK+++ +V
Sbjct: 583 QKVLKTCDERYLEMILSSIKLHLNE-LKNYTYGKHIVTRV 621
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 169/332 (50%), Gaps = 17/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + + + EV+ +LM N++IQK
Sbjct: 673 LSDIAGHIVEFSVDQHGSRFIQQKLEHCSFEEKVSVFKEVLPHASKLMTDVFGNYVIQKF 732
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q +L + ++L++ + G RV+QK L+ E + QL QE
Sbjct: 733 FEHGSPDQRKELADKLSG---QMLQLSLQMYGCRVIQKALEVIELDQKTQLVQE------ 783
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + +GNHVI++C++ P + ++ LAT GC ++Q +
Sbjct: 784 --LDGHVLRCVHDQNGNHVIQKCIECVPTMNIEFIISAFQGQVAALATHPYGCRVIQRVL 841
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
++ +++ I D ++ +AY+L++ YGNYV Q++L P + ++++L G+ +S
Sbjct: 842 EHCSDDLQSQCIVDEILESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGKIVQMS 901
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNV++KCL + +I EII E + ++ D + NYV+Q ++S
Sbjct: 902 QHKYASNVIEKCLEHGSPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKILEISND 961
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ R+ L + + L+ + YGK+++A+
Sbjct: 962 KQ-REILLSRIRIHLHALKKYTYGKHIVARFE 992
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 177/344 (51%), Gaps = 17/344 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM N+++QK
Sbjct: 720 LAEIAGHVVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKF 779
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ +L ++ +L + + G RV+QK ++ + +Q++ +V
Sbjct: 780 FEHGSAEQRRELADKLLG---HVLALSLQMYGCRVIQKAIEV--------VDLDQKTKMV 828
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P D + ++ + + L+T GC ++Q +
Sbjct: 829 TELDGHIMKCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGHVVPLSTHPYGCRVIQRVL 888
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L++ YGNYVVQ++L P + ++ +LAG+ +S
Sbjct: 889 EHCADPKTQQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMS 948
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL G + +I+E++ + + ++ D +GNYV+Q +
Sbjct: 949 QQKFASNVVEKCLTFGGATEREVLISEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDD 1008
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
++ R+ + V + L+ + YGK+++A+V R+A+
Sbjct: 1009 QQ-RELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIAL 1051
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 167/320 (52%), Gaps = 17/320 (5%)
Query: 251 AKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTK 310
+ D+ G RF+Q+K++ D M+ EV LM N++IQK +Q +
Sbjct: 6 SADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKE 65
Query: 311 LILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLS 370
L + S R+L + + G RV+QK L+ + +QQ+ LVS L +
Sbjct: 66 LAQQLPS---RVLTLSLQMYGCRVIQKALEVVDV--------DQQTQLVSELDGHVMRCV 114
Query: 371 KSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR- 429
+ +GNHVI++C++ PPD + ++ L L+T GC ++Q + +EQK +
Sbjct: 115 RDQNGNHVIQKCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQG 174
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
++ +++ + L++ YGNYVVQ++L ++++ +LAG+ +S K +SNV++K
Sbjct: 175 IMQEILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEK 234
Query: 490 CLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
CL G + +INE++ + + ++ D + NYV+Q ++ R+ R+ L +
Sbjct: 235 CLQFGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQ-REILLTRI 293
Query: 546 VDNSPFLQSHMYGKNVLAKV 565
+ L+ + YGK+++A+V
Sbjct: 294 KVHLHALKKYTYGKHIVARV 313
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
C+ + D+ G +Q + A E KA + +V A L +GNYV+Q Q
Sbjct: 2 CVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQ 61
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYG 521
++ QL R LSL V+QK L +Q T +++E+ H +++ + D G
Sbjct: 62 QRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGH--VMRCVRDQNG 119
Query: 522 NYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
N+VIQ + RI Q + L +H YG V+ +V
Sbjct: 120 NHVIQKCIECVPPDRI-QFIICAFYGQVLALSTHPYGCRVIQRV 162
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
++L R++ ++ GCR +QK ++ + ++SE+ + +R Q+ NH+IQK I
Sbjct: 68 QQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCI 127
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ +++ +I + ++L + G RV+Q++L E+ T + Q+QQ ++
Sbjct: 128 ECVPPDRIQFIICAFYG---QVLALSTHPYGCRVIQRVL---EHCTDE---QKQQGIMQE 178
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
L++ T SL++ +GN+V++ L+ +++ ++A + ++ + +++ C+
Sbjct: 179 ILRS-TCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQ 237
Query: 421 LAQEEQKARLIADVVANA------YVLSEHSYGNYVVQYIL 455
++ LI +++ + + + + NYVVQ +L
Sbjct: 238 FGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL 278
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL G ++ +D+ G +QK ++ P I+ I+ + L H +IQ++
Sbjct: 103 VSELDGHVMRCVRDQNGNHVIQKCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRV 162
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLR----ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+ +EQ + I+ Q +LR + D G+ V+Q +L+ G P R
Sbjct: 163 LEHCTDEQKQQGIM------QEILRSTCSLAQDQYGNYVVQHVLEHGTQPER-------- 208
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA------ENCLDLATDR 409
S +++ L V +S+ ++VI++CLQ P + L+ E+ E + D+
Sbjct: 209 SEIITKLAGQIVQMSQHKFASNVIEKCLQFGGPAERQILINEMLGSTDENEALQAMMKDQ 268
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
++Q + + + Q+ L+ + + + L +++YG ++V
Sbjct: 269 FANYVVQKVLEICDDRQREILLTRIKVHLHALKKYTYGKHIV 310
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ V S HG+ I++ L+ + + +E+ + L TD G ++Q
Sbjct: 1 MCVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTA 60
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+Q+ L + + LS YG V+Q L + +V++L G + +
Sbjct: 61 QQRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGN 120
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
+V+QKC+ ++ II + +++ L PYG VIQ + + +Q +
Sbjct: 121 HVIQKCIECVPPDRIQFIICAF--YGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
++ ++ L YG V+ V
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHV 199
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 170/328 (51%), Gaps = 26/328 (7%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+L+ + + D+Q RF+Q+++++ + +++ +E+++D +LM+ N++IQK++
Sbjct: 657 DLQAHLAECSLDQQCSRFIQQRLEDAKDEEKQLLFNELMNDSQKLMKDVFGNYVIQKMLE 716
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
N+ Q T L + + ++ + D G RV+QK L+ +T +QQ L+
Sbjct: 717 YGNQNQRTMLYQQIKGN---MIPLSQDQYGCRVVQKALEV--------VTTQQQDDLIGE 765
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
++ + P+GNHVI++ +++ + + +++ +++ + GC ++Q +
Sbjct: 766 IRPQVQLCVEDPNGNHVIQKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEH 825
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
+E+Q ++ +V L++ YGNYV+ ++L + V+ ++ R LS+ K
Sbjct: 826 CKEDQIKPILVEVFERVLDLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHK 885
Query: 482 CSSNVVQKCLLESGEEQSTGIINEII--------------RHPEIVQLILDPYGNYVIQT 527
SNV++KCL S ++Q II EII ++ ++ ++ D YGN+VIQ
Sbjct: 886 FGSNVIEKCLQHSDQKQKDDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQR 945
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSH 555
D+S + R+ L D ++ + ++ H
Sbjct: 946 VLDISNENQ-RKALIDKILKVALHMKKH 972
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 114/232 (49%), Gaps = 28/232 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I E+R ++ L +D G +QK +++ + ++ I+ ++E+ HQ +IQ++
Sbjct: 763 IGEIRPQVQLCVEDPNGNHVIQKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRM 822
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ E+Q+ +++ V +R+L + DL G+ V+ +L+ G Q+ ++ ++
Sbjct: 823 LEHCKEDQIKPILVEVF---ERVLDLTKDLYGNYVISHVLEHG--------AQKYKTFVI 871
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE----------------NCL 403
+ +K V LS G++VI++CLQ D++EEI + +
Sbjct: 872 NKMKKRVVQLSIHKFGSNVIEKCLQHSDQKQKDDIIEEIIQVRLMDDETYQSNSQNFTLM 931
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEH-SYGNYVVQYI 454
D+ D+ G ++Q + ++ E Q+ LI ++ A + +H S+ +V ++
Sbjct: 932 DVMKDKYGNFVIQRVLDISNENQRKALIDKILKVALHMKKHRSHARHVFNFL 983
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYC-------IPLAQEEQKARLIADVVANAYVLSE 443
TKDL LDL + C L Q C + A++E+K L +++ ++ L +
Sbjct: 650 TKDLT------LLDLQAHLAECSLDQQCSRFIQQRLEDAKDEEKQLLFNELMNDSQKLMK 703
Query: 444 HSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
+GNYV+Q +L + Q+ G LS + VVQK L +Q +I
Sbjct: 704 DVFGNYVIQKMLEYGNQNQRTMLYQQIKGNMIPLSQDQYGCRVVQKALEVVTTQQQDDLI 763
Query: 504 NEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
EI P++ + DP GN+VIQ + ++ Q + D + H YG V+
Sbjct: 764 GEI--RPQVQLCVEDPNGNHVIQKIIEQVSSEKV-QFIVDAFKGRVYEMSVHQYGCRVIQ 820
Query: 564 KV 565
++
Sbjct: 821 RM 822
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 155/303 (51%), Gaps = 24/303 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 680 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 739
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 740 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMV 788
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 789 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 848
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P EQ ++ ++ + L + YGNYV+Q++L P+ + +VA++ G
Sbjct: 849 EHCLP----EQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 904
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 905 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 964
Query: 531 VSQ 533
V++
Sbjct: 965 VAE 967
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 220 RYNNFYARARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILS 277
+Y N+ + H R S + E+RG ++++++ + ++K V + + M++
Sbjct: 874 QYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLID 933
Query: 278 EV--IDD-----LHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLL 323
EV ++D L+ +M+ Q AN+++QK+I V Q K+++ VSS +R +
Sbjct: 934 EVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ-RKIVMHKVSSCRRWM 985
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H ++ ++++ G I+ + D+Q RF+Q+K++ N + + + +E+ + +LM+
Sbjct: 482 HSPKSKRWELKDIWGHIVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDV 541
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
N+++QKL ++ Q K++ S + + +++ + RV+QK L + +
Sbjct: 542 FGNYVMQKLFEYGDQVQ-KKVLASAM--KGKVVDLSMQPYACRVVQKAL--------EHV 590
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
EQQ+ LV L++ + ++K HGNHVI++ + P ++ ++ +LA+ +
Sbjct: 591 LVEQQTELVKELESDLLKVAKDQHGNHVIQQAIVLVPREHIDFIMTGFKGRVYELASHQF 650
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GC ++Q + E KA L+ ++ +A L YGNYV+Q++L P+ A ++ +
Sbjct: 651 GCRVIQRILEHGTEADKAALMVELHNSAQSLVTDMYGNYVIQHVLEKGRPEDRAKMIGVV 710
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLILDPYGNYVIQT 527
+ LS K +SNVV+KC++ E+ I ++++ + + QL+ D +GNYVIQ
Sbjct: 711 TPQLLMLSRHKNASNVVEKCIMLGTPEEQRAIRDKLMGEEPNSPLFQLMKDQFGNYVIQK 770
Query: 528 AWDVSQGR 535
QG+
Sbjct: 771 LVKALQGQ 778
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 164/324 (50%), Gaps = 17/324 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ + D+ G RF+Q+K++ + + I E+I LM N++IQK E
Sbjct: 657 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTES 716
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q +L + +L + + G RV+QK L+ + +QQ +VS L
Sbjct: 717 QRKELANQLTG---HVLPLSLQMYGCRVIQKALEV--------VDVDQQGQMVSELNGAI 765
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ + +GNHVI++C++ P D + ++ + L+T GC ++Q + ++
Sbjct: 766 MKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQN 825
Query: 427 KARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
++I + ++ + L++ YGNYV+Q+I+ P ++++LAG+ +S K +SN
Sbjct: 826 TQQIIMEEIMQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASN 885
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
V++KCL E+ ++NE++ + + ++ DP+GNYV+Q + R + L
Sbjct: 886 VIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRSLELIL 945
Query: 542 YDLVVDNSPFLQSHMYGKNVLAKV 565
+ V + L+ + YGK+++++V
Sbjct: 946 SRIKVHLNA-LKRYTYGKHIVSRV 968
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 163/318 (51%), Gaps = 17/318 (5%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K+ + I E++ LM N++IQK +Q +L
Sbjct: 2 DQYGSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELA 61
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
V +L + + G RV+QK L+ E EQQ+ +V L +
Sbjct: 62 EQVTG---HVLALSLQMYGCRVIQKALEVVEL--------EQQARMVKELDGSVMKCVHD 110
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++C+++ P D+ + ++ L L+T GC ++Q + + + R+I
Sbjct: 111 QNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIM 170
Query: 433 DVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
+ + ++ L++ YGNYV+Q+I+ P ++++ +LAG+ +S K +SNVV+KCL
Sbjct: 171 EEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCL 230
Query: 492 LESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
G E+ ++NE++ + + + ++ DP+GNYV+Q + + + L + V
Sbjct: 231 TFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVH 290
Query: 548 NSPFLQSHMYGKNVLAKV 565
+ L+ + YGK+++A+V
Sbjct: 291 LNA-LKRYTYGKHIVARV 307
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 134/292 (45%), Gaps = 20/292 (6%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDI 272
T + + N+ + H T E++ G ++ ++ GCR +QK ++
Sbjct: 34 TLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQ 93
Query: 273 EMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGS 332
++ E+ + + + Q+ NH+IQK I L ++ + +I S ++L + G
Sbjct: 94 ARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYG---KVLALSTHPYGC 150
Query: 333 RVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
RV+Q++L+ + E Q +++ + + +L++ +GN+VI+ +Q P
Sbjct: 151 RVIQRVLEHID-------DIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERS 203
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA------YVLSEHSY 446
+++ ++A + ++ + +++ C+ E++ L+ +++ + + +
Sbjct: 204 EIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPF 263
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKC--LLESGE 496
GNYVVQ +L Q A +++++ AL ++V + L+ +GE
Sbjct: 264 GNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGE 315
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 169/334 (50%), Gaps = 20/334 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++EL I+ ++D+ G RF+Q+K++ + +++ +E+I+ ++LM N++IQK
Sbjct: 140 LKELCNHIVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKF 199
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L V + +L + + G RV+QK L++ + EQQ+ +V
Sbjct: 200 FEFGSSEQKQLLAERV---KGHVLPLALQMYGCRVIQKALES--------IPVEQQTEVV 248
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ + L+T GC ++Q +
Sbjct: 249 KELDGHVLKCVKDQNGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRIL 308
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ L YGNYV+Q++L + + ++++L G+ LS
Sbjct: 309 EHCTPEQTEPILDELHEATEQLVLDQYGNYVIQHVLEHGRLEDKSKIISKLTGKIVELSQ 368
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII--------RHPEIVQLILDPYGNYVIQTAWDV 531
K +SNV++KC+ S + + ++ E+ + + ++ D + NYVIQ D+
Sbjct: 369 HKFASNVIEKCVSHSTKAERALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMIDM 428
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L + + L+ + YGK++LAK+
Sbjct: 429 ADSPQ-RKILIQKIRPFTGVLRKYTYGKHILAKL 461
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 99/249 (39%), Gaps = 47/249 (18%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+L + L N V S+ HG+ I++ L++ + + EI + DL TD G ++
Sbjct: 137 NLQLKELCNHIVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVI 196
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVVAQLAGRY 474
Q EQK L V + L+ YG V+Q L + + Q T +VV +L G
Sbjct: 197 QKFFEFGSSEQKQLLAERVKGHVLPLALQMYGCRVIQKALESIPVEQQT-EVVKELDGHV 255
Query: 475 FALSLGKCSSNVVQKC------------------------------------LLESGEEQ 498
+ ++VVQKC L EQ
Sbjct: 256 LKCVKDQNGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCTPEQ 315
Query: 499 STGIINEIIRHPEIVQLILDPYGNYVIQTAWD---VSQGRRIRQTLYDLVVDNSPFLQSH 555
+ I++E+ H QL+LD YGNYVIQ + + +I L +V+ L H
Sbjct: 316 TEPILDEL--HEATEQLVLDQYGNYVIQHVLEHGRLEDKSKIISKLTGKIVE----LSQH 369
Query: 556 MYGKNVLAK 564
+ NV+ K
Sbjct: 370 KFASNVIEK 378
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 162/321 (50%), Gaps = 20/321 (6%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI--DDLHELMRHQ 290
H+ ++++ G + + D+ G RF+Q+K+D + + + + EVI + L
Sbjct: 314 HKFKRFELKDVFGHCVEFSTDQHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDV 373
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
N++IQKL +L+ S + + +L++ D+ G RV+QK LD G
Sbjct: 374 FGNYVIQKLFE-YGSPLHRRLLCSAM--EGHVLQLSLDMYGCRVVQKALDCG-------- 422
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
T +QQ+ +VS L + K +GNHVI++ ++ P LL+ + N +LA+
Sbjct: 423 TPQQQAAVVSELNGHVLQCVKDANGNHVIQKIME-LVPSQRNVLLDAFSGNVRNLASHPY 481
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GC +LQ I A E+ A L+ ++ N+ +L + +GNYVVQYIL P ++ L
Sbjct: 482 GCRVLQRSIEHAAPEETASLLEELHQNSSLLMQDQFGNYVVQYILEHGAPAHRDRMIDSL 541
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVI 525
G +++ K +SNV +K LL S + Q +I E++ + ++ D Y NYV+
Sbjct: 542 RGNVLSMARHKFASNVCEKALLVSNDVQRRALIEEMLAPMSNGTSPVSIMMKDQYANYVL 601
Query: 526 QTAWDVSQGRRIRQTLYDLVV 546
Q A +S+ + Q L +V+
Sbjct: 602 QKAISLSEP-ELLQALVSVVI 621
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 149/285 (52%), Gaps = 16/285 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ A D+ G RF+Q+K++ N E I E+ + +LM+ N++IQK + +
Sbjct: 527 VVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKFFE--HGD 584
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q K IL+ + + + + + RV+QK L + + +QQ+ +V L+
Sbjct: 585 QTQKKILAS-KMKGHVSALANQMYACRVVQKAL--------EHVLVDQQASMVKELEKDV 635
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ K +GNHVI++ + + P ++ + ++E + LA + GC ++Q + E Q
Sbjct: 636 LKTVKDQNGNHVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQ 695
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+ ++ ++ A L SYGNYV Q+++ +P+ A +V+ + ++ S K +SNV
Sbjct: 696 RRFIMTELHARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNV 755
Query: 487 VQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQ 526
V++CL+ S +EQ ++N I E ++ L+ D YGNYVIQ
Sbjct: 756 VERCLVCSDDEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQ 800
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G + +A CR +QK ++ ++ E+ D+ + ++ Q+ NH+IQK+I
Sbjct: 594 KMKGHVSALANQMYACRVVQKALEHVLVDQQASMVKELEKDVLKTVKDQNGNHVIQKVID 653
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ E + ++ S + + + + G RV+Q+LL +++ + Q+ +++
Sbjct: 654 RVPMEHIQVIVESF---RGHIGVLAVNSYGCRVIQRLL--------EKVPEPQRRFIMTE 702
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L L +GN+V + ++ P+ ++ I L + + +++ C+
Sbjct: 703 LHARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVC 762
Query: 422 AQEEQKARLIADVVA-------NAYVLSEHSYGNYVVQYIL 455
+ +EQ+ L+ +A N L + YGNYV+Q +L
Sbjct: 763 SDDEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQKLL 803
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +I ++ ++ A D+ G +Q + A E K R+ ++ +N+ L + +GNYV+Q
Sbjct: 520 LPDIYDDVVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKF 579
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ +++ G AL+ + VVQK L +Q ++ E+ + ++++
Sbjct: 580 FEHGDQTQKKILASKMKGHVSALANQMYACRVVQKALEHVLVDQQASMVKELEK--DVLK 637
Query: 515 LILDPYGNYVIQTAWD 530
+ D GN+VIQ D
Sbjct: 638 TVKDQNGNHVIQKVID 653
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 48/164 (29%)
Query: 240 IEELRGRIILVAKDEQGCRFLQK---KVDERN---------------------------- 268
+E RG I ++A + GCR +Q+ KV E
Sbjct: 664 VESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQRRFIMTELHARGADLITDSYGNYVTQHV 723
Query: 269 -----PIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR-- 321
P D I+S + +H+ A++++++ + ++EQ +L+ + ++ +R
Sbjct: 724 IEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVCSDDEQRRELVNAFIAKNERGE 783
Query: 322 --LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
LL + D G+ V+QKLL+ L ++ ++ V+ALK
Sbjct: 784 NNLLNLLKDGYGNYVIQKLLET--------LNRDDYNVFVAALK 819
>gi|356574619|ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 163/324 (50%), Gaps = 17/324 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ + D+ G RF+Q+K++ + + I E+I LM N++IQK +
Sbjct: 656 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTDS 715
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q +L + +L + + G RV+QK L+ + +QQ LVS L
Sbjct: 716 QRKELASQLTG---HVLPLSLQMYGCRVIQKALEV--------VDADQQGQLVSELNGAI 764
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ + +GNHVI++C++ P D + ++ + L+T GC ++Q + +
Sbjct: 765 MKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLN 824
Query: 427 KARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
++I D ++ + L++ YGNYV+Q+I+ P ++++LAG+ +S K +SN
Sbjct: 825 TQQIIMDEIMQSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASN 884
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
V++KCL E+ ++NE++ + + ++ DP+GNYV+Q + R + L
Sbjct: 885 VIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRSLELIL 944
Query: 542 YDLVVDNSPFLQSHMYGKNVLAKV 565
+ V + L+ + YGK+++++V
Sbjct: 945 SRIKVHLNA-LKRYTYGKHIVSRV 967
>gi|403415667|emb|CCM02367.1| predicted protein [Fibroporia radiculosa]
Length = 845
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 167/318 (52%), Gaps = 19/318 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID-DLHELMRHQSA 292
+T ++++ G I+ + D+ G RF+Q+K++ + ++I E++ ++ +L++
Sbjct: 486 KTRKWELKDIYGYIVEFSGDQHGSRFIQQKLETATADERQVIFDEIVPHNVLQLIQDVFG 545
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQKL + Q+ K IL+ + + +L + + G RV+QK + + +
Sbjct: 546 NYVIQKLFE--HGTQVQKTILAN-AMESHVLPLSLQMYGCRVVQKAV--------EHVLP 594
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
EQQS V L + K +GNHVI++ +++ PP+ ++ N DLAT GC
Sbjct: 595 EQQSNFVKELDASVLRCVKDANGNHVIQKLIERVPPERLM-FIKAFKGNVYDLATHPYGC 653
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
+LQ C +E L+ ++ + L + +GNYVVQ++L Q A V+ +L G
Sbjct: 654 RVLQRCFEHLPDEYTRPLLDELHKHVTHLMQDQFGNYVVQFVLEHGKAQDRAVVITKLRG 713
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-HPE----IVQLILDPYGNYVIQT 527
+ ++ K +SNVV+K L+ + E +I+EI+ P+ I+ ++ D + NYV+Q
Sbjct: 714 QMLHMARHKFASNVVEKALITADLENRRALIDEIMAGKPDGISPILTMMKDQFANYVLQR 773
Query: 528 AWDVSQGRRIRQTLYDLV 545
A V +G + R+ L V
Sbjct: 774 ALSVVEGEQ-REALVSKV 790
>gi|340959315|gb|EGS20496.1| hypothetical protein CTHT_0023280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 866
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 154/300 (51%), Gaps = 15/300 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++RG I+ + D+ G RF+Q+K+ N + E I E+ + +LM+ N++IQK
Sbjct: 507 LKDIRGHIVEFSGDQDGSRFIQQKLLTANSEEKEWIFREIEPNAVQLMKDLFGNYVIQKF 566
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ TKL ++ ++ + G RV+QK L + + E+Q++LV
Sbjct: 567 FEHGSMAHKTKLAQAM---HGKMFDLSTQTYGCRVVQKAL--------EHVLVEEQAVLV 615
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + + K+ +GNHV+++ + +++ + +LA+D C ++Q +
Sbjct: 616 KELQPEILKVIKNQNGNHVVQQIIAVVSRSEIDFIMDSMKGRISELASDAYACRVVQRVL 675
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ KA ++ ++ A A +L YGNYV Q+++ P+ + ++ + + LS
Sbjct: 676 ERGTDDDKAFILKELHACAQMLVVDQYGNYVAQHVIQHGKPEDRSKMIEVVIPQVVGLSK 735
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGR 535
K +SNVV+ C+ EQ I ++I+ ++QL+ DPYGNYVIQ D +G+
Sbjct: 736 HKFASNVVETCIAHGTPEQQRAIRDQILPANDTQNSLLQLMKDPYGNYVIQKLLDTLKGQ 795
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 178/352 (50%), Gaps = 35/352 (9%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ +E++ LM
Sbjct: 654 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFG 713
Query: 293 NHLIQKLIGVLNEEQMTKLILSVV---SSQQRLLRICDDL-----------SGSRVMQKL 338
N++IQK + ++LS V S ++ + D L G RV+QK
Sbjct: 714 NYVIQK-------KNHLSIVLSSVFEHGSAAQIRELADQLIGHVLTLSLQMYGCRVIQKA 766
Query: 339 LDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
++ E +QQ+ +VS L + + +GNHVI++C++ P D + ++
Sbjct: 767 IEVVEL--------DQQTKMVSELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTF 818
Query: 399 AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGL 457
+ + L+T GC ++Q + + + R++ D ++ + +L++ YGNYVVQ++L
Sbjct: 819 YDQVVTLSTHPYGCRVIQRVLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEH 878
Query: 458 KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQ 514
P + ++ +L G+ +S K +SNV++KCL + ++NE++ E +Q
Sbjct: 879 GKPHERSSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTAAERQALVNEMLGTTDENEPLQ 938
Query: 515 LIL-DPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+++ D + NYV+Q + +++ + + D + + L+ + YGK+++A+V
Sbjct: 939 VMMKDQFANYVVQKVLETCDDQQL-ELILDRIKVHLNALKKYTYGKHIVARV 989
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 150/276 (54%), Gaps = 11/276 (3%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + +++++ G ++ A+D+ G RF+Q+K+ E + + M+ E++ + LM
Sbjct: 540 NRLTTLTLQDISGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFG 599
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQ+ + EQ+ L + + ++L++ + G RV+QK L+ T ++TQ
Sbjct: 600 NYVIQRFFDLGTPEQIQILGDRI---RNQVLQLSLQMYGCRVIQKALE-----TVSKVTQ 651
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+V L+ + K +GNHV+++C++ PP++ +++ +N L+T GC
Sbjct: 652 IN---IVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGC 708
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + EQ A ++A++ L + YGNYV+Q++L + + +V L G
Sbjct: 709 RVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRG 768
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR 508
R LS+ K +SNVV+K + + ++ +INE+++
Sbjct: 769 RIVELSIHKFASNVVEKAVAHATRQERQALINEVLQ 804
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 461 QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPY 520
++T + ++G + + S +Q+ L ES + T + EI+ P+ L+ D +
Sbjct: 541 RLTTLTLQDISGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREIL--PQCYSLMTDVF 598
Query: 521 GNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
GNYVIQ +D+ +I Q L D + + L MYG V+ K
Sbjct: 599 GNYVIQRFFDLGTPEQI-QILGDRIRNQVLQLSLQMYGCRVIQKA 642
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 204 FLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQ 261
L++ HH + +Y N+ + H +T S + LRGRI+ ++ + ++
Sbjct: 726 ILAELHHF-TEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVE 784
Query: 262 KKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK---LIGVLNEEQMTKLILSVVSS 318
K V + + +++EV+ D + SA++ I + + GV+ + S
Sbjct: 785 KAVAHATRQERQALINEVLQDSIPV----SASNAIMRTADVSGVVYGSETDGSDTDGGGS 840
Query: 319 QQR---LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHG 375
QR L + D + V+QK+LD E P R++L + L SL KSP G
Sbjct: 841 VQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMPKINPHL--------GSLRKSPSG 892
Query: 376 NHVIKRCLQKFPPDYTKDL 394
H+I + ++K+ +DL
Sbjct: 893 KHIINK-MEKYYMKTNQDL 910
>gi|308163019|gb|EFO65384.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia P15]
Length = 652
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 175/376 (46%), Gaps = 33/376 (8%)
Query: 175 TVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYARARHHHHR 234
T +L AT + TT P L+H LSD H+ + ++ ++N +
Sbjct: 263 TCSMDLSQATPQRITTVRPCPLSFTLTHSALSDTHN-----SPTTVFSNEPIAPQSDLPA 317
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDE-----RNPIDIEMILSEVIDDLHELMRH 289
Y +++L+ K+ GC+ LQ+ + + R +D+ + + L+ H
Sbjct: 318 NDYER------KLVLLFKEPTGCKTLQQYLTDFPDKSRYLLDVFIAEYNTPSLMEGLLIH 371
Query: 290 QSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
S N+ QK+I V + Q K++L + Q L IC +L G+R +QKL + +
Sbjct: 372 PSGNYCFQKVIEVSDASQRLKILLLI---QDSLFEICHNLHGTRSIQKLFE-------RV 421
Query: 350 LTQEQQSLLVSALK--NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLAT 407
+ E+++++ L + + L +GNH ++RC++ F P + ++I + ++T
Sbjct: 422 SSDEEKAIIAQQLGTGDRIIKLIVDINGNHCVQRCIETFAPKDCTFIYDQIIRELVLVST 481
Query: 408 DRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-----GLKIPQV 462
+ GCC++Q C+ L E Q+ +++ + + L +GNYV QY L GL
Sbjct: 482 HQHGCCIIQRCLDLCSEAQRVQIVTAIKTHVMELIVDRFGNYVFQYSLEKANNGLCGSIS 541
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGN 522
D++ + G +L K SS+ V+KCL + T I ++ + L +D +GN
Sbjct: 542 ADDLIRPILGHEGSLVSQKFSSHAVEKCLKYGSRKIRTLITENLMASDSFLSLAMDKFGN 601
Query: 523 YVIQTAWDVSQGRRIR 538
YVIQ + + + R
Sbjct: 602 YVIQRVFTCATDEQKR 617
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 246 RIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
RII + D G +Q+ ++ P D I ++I +L + HQ +IQ+ + + +E
Sbjct: 439 RIIKLIVDINGNHCVQRCIETFAPKDCTFIYDQIIRELVLVSTHQHGCCIIQRCLDLCSE 498
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
Q +++ ++ + ++ + D G+ V Q L+ ++ + L+ +
Sbjct: 499 AQRVQIVTAI---KTHVMELIVDRFGNYVFQYSLEKANNGLCGSISADD---LIRPILGH 552
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE---IAENCLDLATDRSGCCLLQYCIPLA 422
SL +H +++CL K+ + L+ E +++ L LA D+ G ++Q A
Sbjct: 553 EGSLVSQKFSSHAVEKCL-KYGSRKIRTLITENLMASDSFLSLAMDKFGNYVIQRVFTCA 611
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
+EQK + V+A+ VLS SY ++VQ
Sbjct: 612 TDEQKRIISQRVLASPEVLS-CSYSRHLVQ 640
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 173/335 (51%), Gaps = 25/335 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM N++IQK
Sbjct: 20 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 79
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L + + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 80 FEFGSLEQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPSDQQNEMV 128
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ--- 416
L + K +GNHV+++C++ P + +++ L+T GC ++Q
Sbjct: 129 RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL 188
Query: 417 -YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+C+P +Q ++ ++ + L + YG+YV++++L P+ + +VA++ G
Sbjct: 189 EHCLP----DQTLPILEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVL 244
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWD 530
LS K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q D
Sbjct: 245 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 304
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V++ + R+ + + + L+ + YGK++LAK+
Sbjct: 305 VAEPGQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 338
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 251 AKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTK 310
+ D+ G RF+Q+K++ D M+ EV LM N++IQK +Q +
Sbjct: 6 SADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKE 65
Query: 311 LILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLS 370
L + S R+L + + G RV+QK L+ + +QQ+ LVS L +
Sbjct: 66 LAQQLPS---RVLTLSLQMYGCRVIQKALEVVDV--------DQQTQLVSELDGHVMRCV 114
Query: 371 KSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR- 429
+ +GNHVI++C++ P D + ++ L L+T GC ++Q + +EQK +
Sbjct: 115 RDQNGNHVIQKCIECVPADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQG 174
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
++ +++ + L++ YGNYVVQ++L ++++ +LAG+ +S K +SNV++K
Sbjct: 175 IMQEILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEK 234
Query: 490 CLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
CL G + +INE++ + + ++ D + NYV+Q ++ R+ R+ L +
Sbjct: 235 CLQFGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQ-REILLTRI 293
Query: 546 VDNSPFLQSHMYGKNVLAKV 565
+ L+ + YGK+++A+V
Sbjct: 294 KVHLHALKKYTYGKHIVARV 313
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
C+ + D+ G +Q + A E KA + +V A L +GNYV+Q Q
Sbjct: 2 CVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQ 61
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYG 521
++ QL R LSL V+QK L +Q T +++E+ H +++ + D G
Sbjct: 62 QRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGH--VMRCVRDQNG 119
Query: 522 NYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
N+VIQ + RI Q + L +H YG V+ +V
Sbjct: 120 NHVIQKCIECVPADRI-QFIICAFYGQVLALSTHPYGCRVIQRV 162
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
++L R++ ++ GCR +QK ++ + ++SE+ + +R Q+ NH+IQK I
Sbjct: 68 QQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCI 127
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ +++ +I + ++L + G RV+Q++L E+ T + Q+QQ ++
Sbjct: 128 ECVPADRIQFIICAFYG---QVLALSTHPYGCRVIQRVL---EHCTDE---QKQQGIMQE 178
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
L++ T SL++ +GN+V++ L+ +++ ++A + ++ + +++ C+
Sbjct: 179 ILRS-TCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQ 237
Query: 421 LAQEEQKARLIADVVANA------YVLSEHSYGNYVVQYIL 455
++ LI +++ + + + + NYVVQ +L
Sbjct: 238 FGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL 278
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 26/223 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLIQK 298
+ EL G ++ +D+ G +QK + E P D I+ I+ + L H +IQ+
Sbjct: 103 VSELDGHVMRCVRDQNGNHVIQKCI-ECVPADRIQFIICAFYGQVLALSTHPYGCRVIQR 161
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLR----ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
++ +EQ + I+ Q +LR + D G+ V+Q +L+ G P R
Sbjct: 162 VLEHCTDEQKQQGIM------QEILRSTCSLAQDQYGNYVVQHVLEHGTQPER------- 208
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA------ENCLDLATD 408
S +++ L V +S+ ++VI++CLQ P + L+ E+ E + D
Sbjct: 209 -SEIITKLAGQIVQMSQHKFASNVIEKCLQFGGPAERQILINEMLGSTDENEALQAMMKD 267
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ ++Q + + + Q+ L+ + + + L +++YG ++V
Sbjct: 268 QFANYVVQKVLEICDDRQREILLTRIKVHLHALKKYTYGKHIV 310
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ V S HG+ I++ L+ + + +E+ + L TD G ++Q
Sbjct: 1 MCVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTA 60
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+Q+ L + + LS YG V+Q L + +V++L G + +
Sbjct: 61 QQRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGN 120
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
+V+QKC+ ++ II + +++ L PYG VIQ + + +Q +
Sbjct: 121 HVIQKCIECVPADRIQFIICAF--YGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
++ ++ L YG V+ V
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHV 199
>gi|268579547|ref|XP_002644756.1| C. briggsae CBR-PUF-9 protein [Caenorhabditis briggsae]
Length = 709
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 174/336 (51%), Gaps = 28/336 (8%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+++++R +I AKD+ G RF+Q+K++ +P D +I + V+++ ELM N++IQK
Sbjct: 339 TLQDIRANVIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFGNYVIQK 398
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
N EQ L+ ++ + ++++ + G RV+QK L+ E + ++ E + +
Sbjct: 399 FFEFGNNEQRNLLVGTI---RGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQV 455
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD----LATDRSGCCL 414
+ +K+ +GNHVI++ +++ P+ + +++ +N D L+ GC +
Sbjct: 456 LKCVKD--------QNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRV 507
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL----GLKIPQVTADVVAQL 470
+Q + ++QK ++ + + L YGNYV+Q+++ ++ DV++
Sbjct: 508 IQRVLEYCSDDQKQPVLDALHIHLKQLVLDQYGNYVIQHVIEHGSASDKEKIVQDVISD- 566
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVI 525
+ K +SNV++KCL G + II+++ P ++Q++ DP+ NYV+
Sbjct: 567 --DLLKFAQHKFASNVIEKCLTYGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVV 624
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
Q DV+ + R+ + + + L+ + +GK++
Sbjct: 625 QKMLDVADPQH-RKKITLTIKPHIATLRKYNFGKHI 659
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG 447
P+ L++I N ++ A D+ G +Q + A KA + V+ NA L +G
Sbjct: 333 PNGAPRTLQDIRANVIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFG 392
Query: 448 NYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
NYV+Q + +V + G L+L V+QK L E+ I+ E+
Sbjct: 393 NYVIQKFFEFGNNEQRNLLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEM- 451
Query: 508 RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV----DNSPFLQSHMYGKNVLA 563
++++ + D GN+VIQ + + R+ Q + D DN L H YG V+
Sbjct: 452 -EGQVLKCVKDQNGNHVIQKVIERVEPERL-QFIIDAFTKNNSDNVYTLSVHPYGCRVIQ 509
Query: 564 KV 565
+V
Sbjct: 510 RV 511
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 178/367 (48%), Gaps = 22/367 (5%)
Query: 171 PNNLTVQRNLVAATNR----YATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYA 226
PN Q+ LV Y +AS S+ + FL H+ ++ F +
Sbjct: 61 PNTNAEQKELVFTKRETMTPYRDNRHASTSFVPKTQRFL----HVKPGDQVQQQFGTFQS 116
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
T +I++ + + D+ GCR LQKK+++ + I+ I ++ ++ L
Sbjct: 117 YT-DVGDMTKMENIDD--NEFLKMCCDQFGCRCLQKKLEDDDDDAIDEIYERMLPIMNNL 173
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
+ Q N+L QKLI V+++EQ IL VS+ + I ++ G+R +QK+++
Sbjct: 174 IADQFGNYLCQKLIEVVDDEQRLD-ILKCVSNNIGI--ISKNIHGTRSVQKMINCAT--- 227
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI-AENCLDL 405
T+ + L+ +L V L +GNHVI+ CL+ F + K + + I ++ +++
Sbjct: 228 ----TKAEIDELILSLSPHIVDLVFDGNGNHVIQECLKTFSKEQNKFIFDGILGDSFVEI 283
Query: 406 ATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTAD 465
+ GCC++Q CI Q +L+ V++N + YGNYVVQYIL + + V D
Sbjct: 284 CEHKHGCCVVQRCIDFGNRGQLNKLVDKVISNTLEIITDPYGNYVVQYILKVDVDHVCMD 343
Query: 466 VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
V + LS K SSNV+++ ++ + ++ +++ ++ +L+ + NYVI
Sbjct: 344 VTKIILDDLIVLSTQKFSSNVIEQLVMSDEVGVKELMFDKFLQYKDVERLLQGSFSNYVI 403
Query: 526 QTAWDVS 532
QT + S
Sbjct: 404 QTCLENS 410
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 167/331 (50%), Gaps = 18/331 (5%)
Query: 240 IEELRGRIILVAK-DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+ ++ GR++ D+ G RF+Q+K++ + + + SEV+ +LM N++IQK
Sbjct: 626 LSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQK 685
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
I Q +L+ + +++ + + G RV+QK L+ + +Q++ L
Sbjct: 686 FIEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEV--------IDVDQKTEL 734
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ L + + +GNHVI++C++ P ++ L+T GC ++Q
Sbjct: 735 IRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRI 794
Query: 419 IPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ ++++ I D ++ +A+ L+ YGNYV Q++L P ++ +L G +
Sbjct: 795 LEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQM 854
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQ 533
S K +SNVV+KCL + + +I EI+ E ++ ++ D + NYV+Q ++S+
Sbjct: 855 SQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 914
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ R+ L + + L+ + YGK+++A+
Sbjct: 915 DQQ-REILVQRMKIHLQSLRKYTYGKHIVAR 944
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 388 PDYTKDLLEEIAENCLDLA-TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
P+ K L +IA ++ D+ G +Q + +E+KA + ++V+ A L +
Sbjct: 619 PNARKLELSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVF 678
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q + P ++V QLAG+ +LSL V+QK L +Q T +I E+
Sbjct: 679 GNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIREL 738
Query: 507 -------IR---------------------------HPEIVQLILDPYGNYVIQTAWDVS 532
+R ++ L PYG VIQ +
Sbjct: 739 DGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHC 798
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D +++++ L YG V V
Sbjct: 799 SDDEETHCIIDEILESAFALAHDQYGNYVTQHV 831
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELR---GRIILVAKDEQGCRFLQKKVDER 267
+GS ++ + +N Y + +T+ + EL G ++ + D+ G RF+Q+K++
Sbjct: 640 VGSWSSENGLIDNGYGSSLLEEFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETA 699
Query: 268 NPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICD 327
+ + I E++ LM N++IQK E Q +L + + +L++
Sbjct: 700 STEEKNTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEAQKKQLASLL---KGYVLQLSL 756
Query: 328 DLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFP 387
+ G RV+QK L+ + E Q+ + L + + +GNHVI++C++ P
Sbjct: 757 QMYGCRVIQKALEV--------VGVEHQTQMALELDGSIMKCVRDQNGNHVIQKCIECIP 808
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV-LSEHSY 446
+ + ++ + +DL+T GC ++Q + +E + + + + V L++ Y
Sbjct: 809 QERIQFIISAFYGHVVDLSTHPYGCRVIQRVLEHCDDESTQNAMMEEIMQSVVPLTQDQY 868
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q++L P+ ++ QLAG+ +S K +SNVV+KCL E+ +INE+
Sbjct: 869 GNYVIQHVLQYGKPEERTSIITQLAGQIVKMSQQKFASNVVEKCLSFGSHEERQILINEM 928
Query: 507 I----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ + + ++ D + NYV+Q + R+ + + + L+ + YGK+++
Sbjct: 929 LGTTDENEPLQAMMKDQFANYVVQKVLETCDDHN-RELILSRIKVHLNALKRYTYGKHIV 987
Query: 563 AKV 565
A+V
Sbjct: 988 ARV 990
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ GRI+ + D+ G RF+Q+K++ +P + + EV+ +L+ N++IQK
Sbjct: 684 LSDIAGRIVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKF 743
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ +L + ++L + + G RV+QK L+ E +Q++ LV
Sbjct: 744 FEHGTHEQRKELADQLAG---QILPLSLQMYGCRVIQKALEVIEL--------DQKTHLV 792
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P + ++ L+T GC ++Q +
Sbjct: 793 RELDGHVMRCVRDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRIL 852
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E +++ I D ++ + Y L++ YGNYV+Q++L + + ++++L G++ +S
Sbjct: 853 EHCSDEAQSQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMS 912
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + II EI+ E ++ ++ D + NYV+Q ++
Sbjct: 913 QHKYASNVVEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQKIIEICND 972
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + + L+ + YGK+++A++
Sbjct: 973 DQ-RERLLNRIKGHLQALKKYTYGKHIVARL 1002
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 172/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ GRI+ + D+ G RF+Q+K++ +P + + EV+ +L+ N++IQK
Sbjct: 684 LSDIAGRIVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKF 743
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ +L + ++L + + G RV+QK L+ E +Q++ LV
Sbjct: 744 FEHGTHEQRKELADQLAG---QILPLSLQMYGCRVIQKALEVIEL--------DQKTHLV 792
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P + ++ L+T GC ++Q +
Sbjct: 793 RELDGHVMRCVRDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRIL 852
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+E +++ I D ++ + Y L++ YGNYV+Q++L + + ++++L G++ +S
Sbjct: 853 EHCSDEAQSQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMS 912
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL + II EI+ E ++ ++ D + NYV+Q ++
Sbjct: 913 QHKYASNVVEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQKIIEICND 972
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + + L+ + YGK+++A++
Sbjct: 973 DQ-RERLLNRIKGHLQALKKYTYGKHIVARL 1002
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 172/337 (51%), Gaps = 17/337 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T + ++ G ++ + D+ G RF+Q+K++ D M+ EV+ LM N
Sbjct: 793 KTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGN 852
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK +Q +L + + ++L + + G RV+QK L+ + +
Sbjct: 853 YVIQKFFEHGTHQQRRELASKL---EGQVLVLSLQMYGCRVIQKALEV--------VDVD 901
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
QQ+ LVS L + + +GNHVI++C++ PP ++ + L+T GC
Sbjct: 902 QQTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCR 961
Query: 414 LLQYCIPLAQEEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + +EQK + ++ +++ + L++ YGNYVVQ++L ++++ +LAG
Sbjct: 962 VIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAG 1021
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTA 528
+ +S K +SNVV+KCL G + +I+E++ + + ++ D + NYV+Q
Sbjct: 1022 QIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQAMMKDQFANYVVQKV 1081
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L + + L+ + YGK+++A+V
Sbjct: 1082 LETCDESQ-RELLLGRIRVHLHALKKYTYGKHIVARV 1117
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 224 FYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDL 283
F+ H R S +E G++++++ GCR +QK ++ + ++SE+ ++
Sbjct: 858 FFEHGTHQQRRELASKLE---GQVLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNV 914
Query: 284 HELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
+R Q+ NH+IQK I + ++ I+S +Q ++ + G RV+Q++L E
Sbjct: 915 MRCVRDQNGNHVIQKCIECVPPAKI-HFIISAFYNQ--VVTLSTHPYGCRVIQRVL---E 968
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
+ T + Q+Q+ ++ L++ T +L++ +GN+V++ L+ +++ ++A +
Sbjct: 969 HCTDE---QKQKGIMEEILRS-TCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIV 1024
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA------YVLSEHSYGNYVVQYIL 455
++ + +++ C+ ++ LI +++ + + + NYVVQ +L
Sbjct: 1025 QMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQAMMKDQFANYVVQKVL 1082
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 167/331 (50%), Gaps = 18/331 (5%)
Query: 240 IEELRGRIILVAK-DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+ ++ GR++ D+ G RF+Q+K++ + + + SEV+ +LM N++IQK
Sbjct: 629 LSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQK 688
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
I Q +L+ + +++ + + G RV+QK L+ + +Q++ L
Sbjct: 689 FIEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEV--------IDVDQKTEL 737
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ L + + +GNHVI++C++ P ++ L+T GC ++Q
Sbjct: 738 IRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRI 797
Query: 419 IPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ ++++ I D ++ +A+ L+ YGNYV Q++L P ++ +L G +
Sbjct: 798 LEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQM 857
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQ 533
S K +SNVV+KCL + + +I EI+ E ++ ++ D + NYV+Q ++S+
Sbjct: 858 SQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 917
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ R+ L + + L+ + YGK+++A+
Sbjct: 918 DQQ-REILVQRMKIHLQSLRKYTYGKHIVAR 947
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 388 PDYTKDLLEEIAENCLDLA-TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
P+ K L +IA ++ D+ G +Q + +E+KA + ++V+ A L +
Sbjct: 622 PNARKLELSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVF 681
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q + P ++V QLAG+ +LSL V+QK L +Q T +I E+
Sbjct: 682 GNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIREL 741
Query: 507 -------IR---------------------------HPEIVQLILDPYGNYVIQTAWDVS 532
+R ++ L PYG VIQ +
Sbjct: 742 DGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHC 801
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ D +++++ L YG V V
Sbjct: 802 SDDEETHCIIDEILESAFALAHDQYGNYVTQHV 834
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 167/330 (50%), Gaps = 27/330 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ ++ A+D+ G RF+Q+K++ N D +M+ SE+I+ LM N++IQK
Sbjct: 41 LRDVTNHVVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYVIQKF 100
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ +L + + +L + + G RV+QK L+A ++ EQQ +V
Sbjct: 101 FEFGTVEQKNELARVLRPN---VLALALQMYGCRVIQKCLEAVDH--------EQQREIV 149
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHVI++ ++ P + +++ + L+T GC ++Q +
Sbjct: 150 KELEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRIL 209
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQK ++ ++ + L YGNYV+Q++L + + ++ ++ S
Sbjct: 210 EHCMMEQKKPILEELHQHIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQ 269
Query: 480 GKCSSNVVQKCL-LESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV---SQGR 535
K +SNVV+KC+ + EE++ II +V ++ D Y NYV+Q DV SQ +
Sbjct: 270 HKFASNVVEKCVCFATAEERNCLII--------LVAMMKDQYANYVVQKLLDVADPSQRK 321
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ Q + V P L+ YGK++L+K+
Sbjct: 322 RLMQNIRPHV----PQLRRFTYGKHILSKL 347
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLL 415
+L + + N V ++ +G+ I++ L++ + + EI E+ L TD G ++
Sbjct: 38 TLQLRDVTNHVVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYVI 97
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG--- 472
Q EQK L + N L+ YG V+Q L + ++V +L G
Sbjct: 98 QKFFEFGTVEQKNELARVLRPNVLALALQMYGCRVIQKCLEAVDHEQQREIVKELEGNIL 157
Query: 473 ---------------------------------RYFALSLGKCSSNVVQKCLLESGEEQS 499
+ FALS V+Q+ L EQ
Sbjct: 158 KCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEHCMMEQK 217
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR---RIRQTLYDLVVDNSPFLQSHM 556
I+ E+ H I L+ D YGNYVIQ + Q RI + + + ++ S H
Sbjct: 218 KPILEEL--HQHIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYS----QHK 271
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 272 FASNVVEK 279
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
H ++EL G I+ KD+ G +QK ++ +P ++ ++ D + L H
Sbjct: 142 HEQQREIVKELEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYG 201
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
+IQ+++ EQ K IL + + L +CD G+ V+Q +L+ G+
Sbjct: 202 CRVIQRILEHCMMEQ-KKPILEELHQHIKSL-VCDQY-GNYVIQHVLEHGQ--------A 250
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E +S ++ ++ + S+ ++V+++C+ + L+ +A + D+
Sbjct: 251 EDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATAEERNCLIILVA-----MMKDQYAN 305
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
++Q + +A Q+ RL+ ++ + L +YG +++
Sbjct: 306 YVVQKLLDVADPSQRKRLMQNIRPHVPQLRRFTYGKHIL 344
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 19/322 (5%)
Query: 217 ASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
A SR N Y R + + ++++ ++ + D+QG RF+Q K++ N + + +
Sbjct: 489 AQSRLLNEY---RSSNKSSKRYELKDIYNYVVEFSGDQQGSRFIQTKLESANSDEKDQVF 545
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
E+ + +LM+ N++IQK N Q+ K IL+ + R++ + + RV+Q
Sbjct: 546 REIEPNAVQLMKDLFGNYVIQKFFEHGN--QVHKKILAG-QMKNRMVDLSTQMYACRVVQ 602
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
K L + + EQQ+ LV L++ T+S+ ++ +GNHVI++ ++ P + + E
Sbjct: 603 KAL--------EHVLVEQQAELVKELEHHTLSIMQNQNGNHVIQKIVELLPRQHIGFIYE 654
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ + +L+T GC ++Q + EE ++ ++ A+ L YGNYVVQ+I+
Sbjct: 655 AVRGHLKELSTQTYGCRVVQRMLEQGTEEDTVVMMDEIYASMTALITDQYGNYVVQHIIT 714
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----- 511
P + + + S K +SN+V+KC++ E T I +IR
Sbjct: 715 NGSPADQRRTIDAVMAQVVQFSKHKYASNIVEKCIVHGTAEDRTKISEILIRTGADGINP 774
Query: 512 IVQLILDPYGNYVIQTAWDVSQ 533
I QL+ D YGNYVIQ D Q
Sbjct: 775 IHQLMKDQYGNYVIQKLVDTLQ 796
>gi|170088350|ref|XP_001875398.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650598|gb|EDR14839.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 380
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 173/329 (52%), Gaps = 30/329 (9%)
Query: 225 YARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDL 283
+ +AR + + I E G D+ G RF+Q+K++ +P + + + EV+ D
Sbjct: 37 WNKARKWDLKNIFGYINEFSG-------DQHGSRFIQQKLETASPEERQTVFDEVMAGDP 89
Query: 284 HELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS--QQRLLRICDDLSGSRVMQKLLDA 341
L++ N++IQK+I E T L S++++ + + R+ + G RV+QK ++
Sbjct: 90 LALVQDVFGNYVIQKMI-----EYGTSLQRSILTTVMEGNIFRLSLQMYGCRVIQKAIE- 143
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
++ EQQSL+V+ L+ + + +GNHV++R ++K P D + N
Sbjct: 144 -------HISLEQQSLIVAELEPRILECVRDSNGNHVVQRLIEKVPSDRL-SFVASFQGN 195
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
DL+ GC +LQ C+ EEQ L+ ++ NA L + +GNYV+Q+++ +
Sbjct: 196 VYDLSRHPYGCRVLQRCLEHLPEEQTRTLVDELHQNAVDLMKDQFGNYVIQFLVEHGQAR 255
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-HPE----IVQLI 516
A +V+ L G+ +S K +SNV +K L+ + + +I+E++ PE I+ ++
Sbjct: 256 DRALIVSNLQGKLLPMSRHKFASNVCEKALICADPQTRRALIDEMLAIAPETITPIMTMM 315
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
D + NYV+Q A V++G + R+ L++ V
Sbjct: 316 QDQFANYVLQRALLVAEGDQ-REELFNTV 343
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S + +G + +++ GCR LQ+ ++ ++ E+ + +LM+ Q N++IQ
Sbjct: 187 SFVASFQGNVYDLSRHPYGCRVLQRCLEHLPEEQTRTLVDELHQNAVDLMKDQFGNYVIQ 246
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L+ Q L V + Q +LL + S V +K L + TR+ L E +
Sbjct: 247 FLV---EHGQARDRALIVSNLQGKLLPMSRHKFASNVCEKALICADPQTRRALIDE---M 300
Query: 358 LVSALKNIT--VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
L A + IT +++ + N+V++R L D ++L + + ++
Sbjct: 301 LAIAPETITPIMTMMQDQFANYVLQRALLVAEGDQREELFNTVRQQLVN 349
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 174/333 (52%), Gaps = 19/333 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +++G I +KD+ G R +Q+K++ + + +++ EV+ +H LM N+++QK
Sbjct: 5 LSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKF 64
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ K IL+ S +L + + G RV+QK +++ E ++Q LL+
Sbjct: 65 FEHGTTEQ--KRILADKLSG-HILSLTLQMYGCRVIQKAIESIEL--------DKQILLI 113
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L V +GNHVI++C++K P + + +++ + LAT GC ++Q +
Sbjct: 114 GELNGHIVQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRIL 173
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E Q A ++ +++ A L + YGNYV+Q++L + +V +L G+ + LS
Sbjct: 174 EHCAESQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQ 233
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI---IRHPE----IVQLILDPYGNYVIQTAWDVS 532
K +SNV++KC+ + IINEI I P +++++ DPY NYVIQ D+
Sbjct: 234 HKFASNVIEKCVQHGVSSERILIINEILGDINAPNSSNVLLKILKDPYANYVIQKILDIV 293
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R + + + P L+ GK++++++
Sbjct: 294 EPSQ-RDVIINRIQPFIPTLKKVTPGKHIISRI 325
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 43/246 (17%)
Query: 357 LLVSALKNITVSLSKSPHGNHVIKR--------------------------------CLQ 384
L +S +K SK G+ +I++ LQ
Sbjct: 3 LELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQ 62
Query: 385 KFPPDYTKD----LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV 440
KF T + L ++++ + L L GC ++Q I + +++ LI ++ +
Sbjct: 63 KFFEHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKAIESIELDKQILLIGELNGHIVQ 122
Query: 441 LSEHSYGNYVVQYILGLKIP-QVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQS 499
GN+V+Q + KIP + ++ G + L+ V+Q+ L E Q
Sbjct: 123 CVTDQNGNHVIQKCIE-KIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQV 181
Query: 500 TGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPF-LQSHMYG 558
I++E++R V L+ D YGNYVIQ + R +Y L + L H +
Sbjct: 182 APILDELMRCA--VSLVQDQYGNYVIQHVLENGSQRDKTAIVYKL--QGQIYNLSQHKFA 237
Query: 559 KNVLAK 564
NV+ K
Sbjct: 238 SNVIEK 243
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 165/332 (49%), Gaps = 18/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+++L+G I+ + D+ G RF+Q++++ + + I E+ +LM N+++QK
Sbjct: 425 LKDLQGHIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKF 484
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ K +L+ + +L + + G RV+QK + EY + +Q+ L+
Sbjct: 485 F--VHGSNAQKAVLTK-QMEGHVLSLSLQMYGCRVVQKAI---EY-----VDTAKQAHLI 533
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + K +GNHVI++ ++K PP + + ++ E LAT GC ++Q +
Sbjct: 534 NELDKHVLRCVKDQNGNHVIQKAIEKIPPQHIQFIINAFNEQVYQLATHPYGCRVIQRML 593
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E Q A ++A++ AY L + YGNYV+Q++L P ++ + S
Sbjct: 594 EHCEEAQAA-ILAELHNYAYHLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSR 652
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC++ Q +I EI E I ++ D + NYVIQ DVS+G
Sbjct: 653 HKFASNVVEKCVIYGNRRQRRALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEG 712
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
L ++ + L+ + YGK++ + R
Sbjct: 713 EDF-DLLVSIIKPHLASLKKYSYGKHLASIER 743
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 171/338 (50%), Gaps = 23/338 (6%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ + M+ EV+ LM N++IQK N +Q +L
Sbjct: 1 DQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELA 60
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
+V +L + + G RV+QK L+ + +QQ+ LV L + +
Sbjct: 61 NLLVG---HMLELSLQMYGCRVIQKALEVCDV--------DQQTQLVVELDGHVMRCVRD 109
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK-ARLI 431
+GNHVI++C++ PPD + ++ L L+T GC ++Q + ++QK A ++
Sbjct: 110 QNGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIM 169
Query: 432 ADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
+++ L++ YGNYV+Q++L P ++++ +LAG+ +S K +SNVV+KCL
Sbjct: 170 EEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCL 229
Query: 492 LESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
G + +++E++ + + ++ D + NYV+Q + ++ R+ L +
Sbjct: 230 EFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQ-REMLLGRIKV 288
Query: 548 NSPFLQSHMYGKNVLAKVR------GNKNRFHNRVAMW 579
+ L+ + YGK+++A+V G F +A++
Sbjct: 289 HLHALKKYTYGKHIVARVEKLVAAGGTNQAFSLVIALF 326
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L G ++ ++ GCR +QK ++ + ++ E+ + +R Q+ NH+IQK I
Sbjct: 63 LVGHMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVRDQNGNHVIQKCIEC 122
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
+ +++ + I+S Q +L + G RV+Q++L E+ T Q +Q+ ++ +
Sbjct: 123 VPPDKI-QFIISAFYGQ--VLVLSTHPYGCRVIQRVL---EHCTDDQ----KQAGIMEEI 172
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
T SL++ +GN+VI+ L+ P +++ ++A + ++ + +++ C+
Sbjct: 173 LGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEFG 232
Query: 423 QEEQKARLIADVVANA------YVLSEHSYGNYVVQYIL 455
++ L+ +++ + + + NYVVQ +L
Sbjct: 233 GPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVL 271
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL G ++ +D+ G +QK ++ P I+ I+S + L H +IQ++
Sbjct: 96 VVELDGHVMRCVRDQNGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRV 155
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ ++Q I+ + + D G+ V+Q +L+ G+ R S ++
Sbjct: 156 LEHCTDDQKQAGIMEEILGAT--CSLAQDQYGNYVIQHVLEHGKPHER--------SEII 205
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA----ENC--LDLATDRSGCC 413
+ L V +S+ ++V+++CL+ P + L++E+ EN + D+
Sbjct: 206 TKLAGQIVQMSQHKFASNVVEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANY 265
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
++Q + ++Q+ L+ + + + L +++YG ++V
Sbjct: 266 VVQKVLETCSDQQREMLLGRIKVHLHALKKYTYGKHIV 303
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 175/340 (51%), Gaps = 24/340 (7%)
Query: 234 RTSYSSIE--ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
R S+E +L G + ++ D+ G RF+Q+K++ + D E I E++ + L
Sbjct: 97 RNGADSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVF 156
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK E Q+ +L + + +L + + G RV+QK+L+ +
Sbjct: 157 GNYVIQKFFEFATERQLIQLADQL---KGHILELSLQMYGCRVVQKVLEV--------VD 205
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++++ +V L+N + +GNHVI++C++ P D +++ I L L T + G
Sbjct: 206 KDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYG 265
Query: 412 CCLLQYCI-----PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
C ++Q + P+ Q + + ++V + L++ +GNYVVQ++L P+ + +
Sbjct: 266 CRVIQRVLEHCHDPVTQ----SATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAI 321
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVI 525
+ +L+G+ LS K +SNV++KCL E+ +I EII + Q L+ D +GNYV+
Sbjct: 322 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 381
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q R + L + + + L+++ YGK+++ +V
Sbjct: 382 QKVLKTCDERYLEMILSSIKLHLNE-LKNYTYGKHIVTRV 420
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 55/275 (20%)
Query: 241 EELRGRIILVAKDEQGCRFLQKK---VDERNPIDIEMILSEVIDDLHELMRH-------Q 290
++L+G I+ ++ GCR +QK VD+ IDI +HEL H Q
Sbjct: 178 DQLKGHILELSLQMYGCRVVQKVLEVVDKDRKIDI----------VHELRNHILKCIGDQ 227
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
+ NH+IQK I + E+++ +I ++S ++L +C G RV+Q++L+ P Q
Sbjct: 228 NGNHVIQKCIECVPEDRIPFVIDPILS---QILVLCTHQYGCRVIQRVLEHCHDPVTQSA 284
Query: 351 TQ-----------------------------EQQSLLVSALKNITVSLSKSPHGNHVIKR 381
T E++S ++ L V LSK + ++VI++
Sbjct: 285 TMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEK 344
Query: 382 CLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA 438
CL+ + L+ EI + +L D+ G ++Q + E +++ + +
Sbjct: 345 CLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHL 404
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
L ++YG ++V + L + +A L+G+
Sbjct: 405 NELKNYTYGKHIVTRVEKLIVTGEERARMASLSGQ 439
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 157/313 (50%), Gaps = 17/313 (5%)
Query: 258 RFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVS 317
RF+Q+K++ P + + E++ +LM N++IQK N Q +L ++
Sbjct: 542 RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMG 601
Query: 318 SQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNH 377
+++ + + G RV+QK LD E R +L +E ++ +++ +GNH
Sbjct: 602 ---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRD--------QNGNH 650
Query: 378 VIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVA 436
VI++C++ P D +L L+ GC ++Q + + + R I + ++
Sbjct: 651 VIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILE 710
Query: 437 NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGE 496
+ VLS+ YGNYV Q++L + + +L+G LSL K +SNV++KCL G
Sbjct: 711 SVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGR 770
Query: 497 EQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFL 552
+ II EI E ++ ++ D YGNYV+Q ++ + R TL+ V ++ L
Sbjct: 771 VERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQ-RLTLFSRVRMHASAL 829
Query: 553 QSHMYGKNVLAKV 565
+ + YGK++++++
Sbjct: 830 KKYTYGKHIVSRL 842
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
++L G+I+ ++ GCR +QK +D P + E+ + +R Q+ NH+IQK I
Sbjct: 597 DQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCI 656
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ +++ ++ + + ++ + G RV+Q+LL+ + + + E+
Sbjct: 657 ENIPADKVGFMLYAF---RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEE------ 707
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
L+++ V LSK +GN+V + L+K + + + +++ + + L+ + +++ C+
Sbjct: 708 ILESVCV-LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLE 766
Query: 421 LAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQYIL 455
++ +I ++ + ++ + YGNYVVQ I
Sbjct: 767 YGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIF 807
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 157/313 (50%), Gaps = 17/313 (5%)
Query: 258 RFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVS 317
RF+Q+K++ P + + E++ +LM N++IQK N Q +L ++
Sbjct: 542 RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMG 601
Query: 318 SQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNH 377
+++ + + G RV+QK LD E R +L +E ++ +++ +GNH
Sbjct: 602 ---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRD--------QNGNH 650
Query: 378 VIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVA 436
VI++C++ P D +L L+ GC ++Q + + + R I + ++
Sbjct: 651 VIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILE 710
Query: 437 NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGE 496
+ VLS+ YGNYV Q++L + + +L+G LSL K +SNV++KCL G
Sbjct: 711 SVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGR 770
Query: 497 EQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFL 552
+ II EI E ++ ++ D YGNYV+Q ++ + R TL+ V ++ L
Sbjct: 771 VERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQ-RLTLFSRVRMHASAL 829
Query: 553 QSHMYGKNVLAKV 565
+ + YGK++++++
Sbjct: 830 KKYTYGKHIVSRL 842
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
++L G+I+ ++ GCR +QK +D P + E+ + +R Q+ NH+IQK I
Sbjct: 597 DQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCI 656
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ +++ ++ + + ++ + G RV+Q+LL+ + + + E+
Sbjct: 657 ENIPADKVGFMLYAF---RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEE------ 707
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
L+++ V LSK +GN+V + L+K + + + +++ + + L+ + +++ C+
Sbjct: 708 ILESVCV-LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLE 766
Query: 421 LAQEEQKARLIADVVA------NAYVLSEHSYGNYVVQYIL 455
++ +I ++ + ++ + YGNYVVQ I
Sbjct: 767 YGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIF 807
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 392 KDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
K + A +C+D+AT + GCC+L CI + E + RL+A++ ANA +L++ YGNYVV
Sbjct: 22 KFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVV 81
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
QY+L +IP + Q G Y +S+ K SS VV+KCL+ +E II+E++ P
Sbjct: 82 QYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELLSDPH 141
Query: 512 IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
L+ DP+ NYVIQ A S+G +Y+L+V+
Sbjct: 142 FDLLLQDPHANYVIQKALRHSEGH-----VYNLLVE 172
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 164/338 (48%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ G I+ + D+ G RF+Q+K++ + + SEV+ LM
Sbjct: 668 NRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFG 727
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 728 NYVIQKFFEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 776
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 777 DQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 836
Query: 413 CLLQYCIP-LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + Q +I +++ +A VL++ YGNYV Q++L ++++LA
Sbjct: 837 RVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLA 896
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI++ E ++ ++ D Y NYV+Q
Sbjct: 897 GQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQK 956
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ L V + L+ + YGK+++++V
Sbjct: 957 ILETCNEQQ-RELLLSRVKGHLQALRKYTYGKHIVSRV 993
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 19/322 (5%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ +AKD C LQ ++ P + + I + + + EL+ +AN +IQKL + EEQ
Sbjct: 91 VKMAKDRSDCIQLQDQIARATPTERDTIFNALYPHMGELVCDGAANFVIQKLCENITEEQ 150
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
++++ + Q I D +G RV+QK ++ Q + + + AL V
Sbjct: 151 QSRMLSFFLEDVQF---IVDHPNGCRVLQKFIE--------QTSPKNIDPIFLALLPRFV 199
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
L S +GNH+ +R + K P + +++++I + +L D GC ++Q +
Sbjct: 200 ELCSSQNGNHIAQRFIIKIP-NRVPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDL 258
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ +V+ A L+ + +GNYVVQ IL P+ ++ G ++ S+ K +SNV+
Sbjct: 259 IPLVDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIRAFTGHFYEFSMHKFASNVI 318
Query: 488 QKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTL 541
+KC+ ++ ++Q I EII P I +++ D +GNYVIQ + + R +
Sbjct: 319 EKCIRKANQQQQNMIFTEIIGPEENYNKPRIKEMVSDQFGNYVIQRIIEFGTKSQ-RDII 377
Query: 542 YDLVVDNSPFLQSHMYGKNVLA 563
Y + +N +L Y K+V++
Sbjct: 378 YVVSFENYNYLIKVSYAKHVIS 399
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 164/338 (48%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ G I+ + D+ G RF+Q+K++ + + SEV+ LM
Sbjct: 800 NRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFG 859
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 860 NYVIQKFFEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 908
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 909 DQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 968
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A VL++ YGNYV Q++L ++++LA
Sbjct: 969 RVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLA 1028
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI++ E ++ ++ D Y NYV+Q
Sbjct: 1029 GQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQK 1088
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ L V + L+ + YGK+++++V
Sbjct: 1089 ILETCNEQQ-RELLLSRVKGHLQALRKYTYGKHIVSRV 1125
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 164/338 (48%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ G I+ + D+ G RF+Q+K++ + + SEV+ LM
Sbjct: 663 NRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFG 722
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 723 NYVIQKFFEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 771
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 772 DQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 831
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A VL++ YGNYV Q++L ++++LA
Sbjct: 832 RVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLA 891
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI++ E ++ ++ D Y NYV+Q
Sbjct: 892 GQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQK 951
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ L V + L+ + YGK+++++V
Sbjct: 952 ILETCNEQQ-RELLLSRVKGHLQALRKYTYGKHIVSRV 988
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 183/363 (50%), Gaps = 20/363 (5%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELR---GRIILVAKDEQGCRFLQKKVDER 267
+GS + + +N Y + +T+ + EL G ++ + D+ G RF+Q+K++
Sbjct: 633 MGSWNSDNGLIDNGYGSSLLEEFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETA 692
Query: 268 NPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICD 327
+ + + I E++ LM N++IQK E Q +L + + +L++
Sbjct: 693 SAEEKDTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEPQKKQLASLL---KGYVLQLSL 749
Query: 328 DLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFP 387
+ G RV+QK L+ E EQQ+ + L + + +GNHVI++C++ P
Sbjct: 750 QMYGCRVIQKALEMVEV--------EQQTQMALELDGNIMKCVRDQNGNHVIQKCIECIP 801
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ-KARLIADVVANAYVLSEHSY 446
+ + ++ + ++L+T GC ++Q + +E ++ ++ +++ + +L+ Y
Sbjct: 802 QERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIMQSVVLLTLDQY 861
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYV+Q++L P + ++ QLAG+ +S K +SNVV+KCL E+ +INE+
Sbjct: 862 GNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEKCLSFGSPEERQILINEM 921
Query: 507 I----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ + + ++ D + NYV+Q + + R+ + + + L+ + YGK+++
Sbjct: 922 LGTTDENEPLQAMMKDQFANYVVQKVLETCDDQN-RELILSRIKVHLNALKRYTYGKHIV 980
Query: 563 AKV 565
A+V
Sbjct: 981 ARV 983
>gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprolegnia parasitica]
Length = 773
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 161/342 (47%), Gaps = 26/342 (7%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+ RG ++ AKD+ G RF+Q+K++ +++ +E+ LM N++IQK
Sbjct: 442 DARGHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFD 501
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
++ L+L +S R+L + + G RV+QK L+ P + L +S
Sbjct: 502 FGTSHHLS-LLLRTISG--RVLELALQMYGCRVIQKALELKNMPEKLHL--------ISE 550
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFP------PDYTKDLLEEIAENCLDLATDRSGCCLL 415
L + K +GNHV+++C++ P D +L N LAT GC ++
Sbjct: 551 LTGHVLKCVKDQNGNHVVQKCIEILPWKTPVAMDVGGFILSAFLGNVYSLATHPYGCRVI 610
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q + E Q A ++ ++ +L E YGNYV+Q++L P + V+ ++
Sbjct: 611 QRVLEHCTEAQMAPILKEIHDCCCLLVEDQYGNYVIQHVLEHGQPSERSQVINKVYPDIV 670
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWD 530
S K +SNV++KCL+ + Q I+ ++ E + ++ D Y NYV+Q D
Sbjct: 671 RFSYHKFASNVIEKCLMYASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQKLID 730
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV---LAKVRGNK 569
V+ R+ + ++ + L+ +GK++ L K+ G K
Sbjct: 731 VADAEE-RERMXVIIKTQASHLKRFNFGKHILNRLEKLTGQK 771
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 183/371 (49%), Gaps = 21/371 (5%)
Query: 204 FLSDHHHLGSSTNASSRY--NNFYARARHHHHRTSYSSIE--ELRGRIILVAKDEQGCRF 259
F S+ +LG + S Y +NF + S E E+ ++ + D+ G RF
Sbjct: 671 FPSNLRNLGGWNSDPSGYMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRF 730
Query: 260 LQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQ 319
+Q+K++ + +M+ E++ LM N+++QK + Q +L +
Sbjct: 731 IQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG-- 788
Query: 320 QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVI 379
+L + + G RV+QK ++ + +Q++ +V+ L + + +GNHVI
Sbjct: 789 -HVLALSLQMYGCRVIQKAIEV--------VDLDQKTKMVTELDGHIMRCVRDQNGNHVI 839
Query: 380 KRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANA 438
++C++ P D + ++ + L+T GC ++Q + + + ++ D ++ +
Sbjct: 840 QKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEILQSV 899
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQ 498
+L++ YGNYVVQ++L P + ++ +LAG+ +S K +SNVV+KCL G +
Sbjct: 900 CMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAE 959
Query: 499 STGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQS 554
+INE++ + + ++ D +GNYV+Q + ++ R+ + V + L+
Sbjct: 960 REVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQ-RELILSRVKVHLSALKK 1018
Query: 555 HMYGKNVLAKV 565
+ YGK+++A+V
Sbjct: 1019 YTYGKHIVARV 1029
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 169/339 (49%), Gaps = 26/339 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ A D+ G RF+Q+K++ P D + + E+ + ++LM N++ QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K L+ R+L++ + G RV+QK LD L EQ++ +V
Sbjct: 351 F--EHGDQLQKAALAK-KMDGRVLQLSMQMYGCRVVQKALD--------HLLNEQRAKIV 399
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + KS + NHV++R + PP D + +LA GC +LQ
Sbjct: 400 AELEPHILECVKSSNANHVVQRIINTGPPQSIPD---SFIGHVEELAKHPYGCRVLQKTF 456
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K L+ ++ L+E +GNYV+Q ++ + P+ V++QL GR +
Sbjct: 457 ENLDDKMKRSLLDEMHKCVIPLTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFAR 516
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-RHPE----IVQLILDPYGNYVIQT---AWDV 531
K +SNVV+K L+ + +I+E+I P+ + L+ D Y N+ +QT A D
Sbjct: 517 HKFASNVVEKALIHADPADRRVLIDELIGMQPDGTNQVGMLLRDAYANFPLQTGMFAADP 576
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKN 570
+Q R+ L ++V+ P L+ GK + ++ +N
Sbjct: 577 AQ----REELLEIVLPLLPPLRHTPVGKRIEGRLAQMEN 611
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ H LM
Sbjct: 622 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFG 681
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 682 NYVIQKFFEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEV--------VDL 730
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 731 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 790
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 791 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 850
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 851 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 910
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+V+A++
Sbjct: 911 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHVVARI 947
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 183/371 (49%), Gaps = 21/371 (5%)
Query: 204 FLSDHHHLGSSTNASSRY--NNFYARARHHHHRTSYSSIE--ELRGRIILVAKDEQGCRF 259
F S+ +LG + S Y +NF + S E E+ ++ + D+ G RF
Sbjct: 683 FPSNLRNLGGWNSDPSGYMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRF 742
Query: 260 LQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQ 319
+Q+K++ + +M+ E++ LM N+++QK + Q +L +
Sbjct: 743 IQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG-- 800
Query: 320 QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVI 379
+L + + G RV+QK ++ + +Q++ +V+ L + + +GNHVI
Sbjct: 801 -HVLALSLQMYGCRVIQKAIEV--------VDLDQKTKMVTELDGHIMRCVRDQNGNHVI 851
Query: 380 KRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANA 438
++C++ P D + ++ + L+T GC ++Q + + + ++ D ++ +
Sbjct: 852 QKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEILQSV 911
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQ 498
+L++ YGNYVVQ++L P + ++ +LAG+ +S K +SNVV+KCL G +
Sbjct: 912 CMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAE 971
Query: 499 STGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQS 554
+INE++ + + ++ D +GNYV+Q + ++ R+ + V + L+
Sbjct: 972 REVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQ-RELILSRVKVHLSALKK 1030
Query: 555 HMYGKNVLAKV 565
+ YGK+++A+V
Sbjct: 1031 YTYGKHIVARV 1041
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 23/325 (7%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
++ + D+ G RF+Q+K++ N + E I +E+ + +LM N++IQK E
Sbjct: 621 VVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKFF-----E 675
Query: 307 QMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
+L S+++ Q +L + + G RV+QK L+ + EQQ+ LV L
Sbjct: 676 HGNQLQKSILAKQMEGHVLALSLQMYGCRVVQKALE--------HILTEQQASLVKELDG 727
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ K +GNHV+++ +++ P ++ + +++ LAT GC ++Q + E
Sbjct: 728 SVLKCVKDQNGNHVVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVIQRMLEHCDE 787
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+A L+ ++ L + YGNYV Q+++ P+ A +++ + + S K +S
Sbjct: 788 TAQASLLQELHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFAS 847
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVSQGRRIR 538
NVV+K + EE+ I+ +++ P + L+ D YGNYVIQ + QG R
Sbjct: 848 NVVEKSITFGSEEEKREIV-KVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPD-R 905
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLA 563
+TL + + L+ YGK + A
Sbjct: 906 ETLVEQIKPQLQALKKFTYGKQINA 930
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ H LM
Sbjct: 622 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFG 681
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 682 NYVIQKFFEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEV--------VDL 730
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 731 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 790
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 791 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 850
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 851 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 910
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+V+A++
Sbjct: 911 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHVVARI 947
>gi|115489226|ref|NP_001067100.1| Os12g0574400 [Oryza sativa Japonica Group]
gi|77556895|gb|ABA99691.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649607|dbj|BAF30119.1| Os12g0574400 [Oryza sativa Japonica Group]
Length = 1274
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 164/335 (48%), Gaps = 27/335 (8%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI-- 300
+ G ++ + D+ G RF+Q+K+ P + M+ E++ E++ N+++QK+I
Sbjct: 926 IEGHVLQCSIDQCGSRFIQQKLPTATPDEKLMVFKEIMPHFLEMVTDVFGNYVLQKMIEH 985
Query: 301 -GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++T + VSS + L G RV+Q+ ++ + + Q+ +E S ++
Sbjct: 986 GAPFQRREITACLFGSVSS------LSCQLYGCRVVQRAVELSDLDQKIQIAKELNSNIM 1039
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ + P+ NHV+++C++ PP + + +E + ++L+ GC ++Q +
Sbjct: 1040 KCIHD--------PNANHVVQKCIEHVPPRFIQFFVESMYGRVVELSVHPYGCRVIQRIL 1091
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ + +++ Y +++ Y NYVVQ IL V + ++ + GR A+S
Sbjct: 1092 EYFDSSIQEIFLEEIIEEVYYMAKDQYANYVVQNILQHGKALVRSAIIKKFIGRVVAMSK 1151
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ---------LILDPYGNYVIQTAWD 530
K +SNV++KCL+ ++ IINE+I ++V+ ++ D Y NYV+Q +
Sbjct: 1152 QKFASNVIEKCLIFGSYDEKQKIINEVIGTTDLVRSGETEALVVMVNDQYANYVVQKVIE 1211
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + L L +S L Y K+V+A++
Sbjct: 1212 TCDEWQRKLILRRLRAHHS-LLHDCTYAKHVVARL 1245
>gi|353234912|emb|CCA66932.1| hypothetical protein PIIN_00770 [Piriformospora indica DSM 11827]
Length = 832
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 33/357 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS--ANHLIQ 297
++++ G ++ +KD+ G RF+Q K+ + M+ E+I + H + Q+ N+++Q
Sbjct: 467 LQDIAGHVVEFSKDQHGSRFIQHKLTTATEANRNMVYREIIPN-HVISSAQNVFGNYVLQ 525
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+L + E+ + ++ Q ++ + D+ G RV+QK++D L +Q+
Sbjct: 526 RLCELGTPEERASIARTL---QGHIVMLSLDIYGCRVLQKMID--------YLGAAEQAH 574
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
V+ L + K +GNHVI++ L+ D++ + + ++AT GC +LQ
Sbjct: 575 WVAELHGHILQCVKDANGNHVIQKFLESPLSDHSL-FVNTFKTHVFEMATHPYGCRVLQR 633
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C + E L+ ++ L + YGNYV+Q+IL V+ L G +
Sbjct: 634 CFEHVEPELTRPLLNEMHLRTLELMQDQYGNYVMQFILEKGSSHDRTRVIQALTGHMLPM 693
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEI-IRHPE----IVQLILDPYGNYVIQTAWDVS 532
S K +SNV +K +L EQ +I EI ++ P+ I+ +I D + NYV+Q A +V+
Sbjct: 694 SKHKYASNVCEKAILNGTVEQRRPLIEEISVQRPDGMNPIITMIKDQFANYVLQRALEVA 753
Query: 533 QGR-------RIRQTLYDL--VVDNSPFLQSHMYGKNVLAKVRG---NKNRFHNRVA 577
+G+ +R L+++ + PF + H+ + +VR N +H+R A
Sbjct: 754 EGKPLDALLTALRPQLHNMRRYASSGPFAK-HIIAVEKILQVRNIDINAREYHSRTA 809
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 181/355 (50%), Gaps = 25/355 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E+I LM
Sbjct: 695 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFG 754
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N++IQK G++++ E KL V L + + G RV+QK ++
Sbjct: 755 NYVIQKFFEHGLVSQRRELAGKLYGHV-------LTLSLQMYGCRVIQKAIEV------- 800
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +Q+ +V L + + +GNHVI++C++ P D + ++ + + L+T
Sbjct: 801 -VDPDQKIKMVEELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTH 859
Query: 409 RSGCCLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + +++++ +++ + +L++ YGNYVVQ++L P + ++
Sbjct: 860 PYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAII 919
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LAG+ +S K +SNVV+KCL G + ++NE++ + + ++ D + NY
Sbjct: 920 KELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANY 979
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
V+Q + ++ R+ + + + L+ + YGK+++A+V R+A+
Sbjct: 980 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAI 1033
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 181/355 (50%), Gaps = 25/355 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E+I LM
Sbjct: 721 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFG 780
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N++IQK G++++ E KL V L + + G RV+QK ++
Sbjct: 781 NYVIQKFFEHGLVSQRRELAGKLYGHV-------LTLSLQMYGCRVIQKAIEV------- 826
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +Q+ +V L + + +GNHVI++C++ P D + ++ + + L+T
Sbjct: 827 -VDPDQKIKMVEELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTH 885
Query: 409 RSGCCLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + +++++ +++ + +L++ YGNYVVQ++L P + ++
Sbjct: 886 PYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAII 945
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LAG+ +S K +SNVV+KCL G + ++NE++ + + ++ D + NY
Sbjct: 946 KELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANY 1005
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
V+Q + ++ R+ + + + L+ + YGK+++A+V R+A+
Sbjct: 1006 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAI 1059
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 163/313 (52%), Gaps = 19/313 (6%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSANHLIQ 297
+++++ G ++ + D+ G RF+Q+K++ + + ++I E++ +L++ N+++Q
Sbjct: 37 TLKDIYGHVVEFSMDQHGSRFIQQKIETADEEEKQIIFDEIMPHHALKLIQDVFGNYVVQ 96
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
K NE Q + L ++ + +L + + G RV+QK ++ + EQQS
Sbjct: 97 KFFEHGNELQTSLLAKTM---EGHILPLSLQMYGCRVVQKAIE--------HMPAEQQSA 145
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
V L + K +GNHVI+R ++ PP+ + C DLAT GC +LQ
Sbjct: 146 FVDELAGDVLRCVKDANGNHVIQRLIESVPPERLTFIAAFQGHVC-DLATHPYGCRVLQR 204
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C E Q L+++V +A L + +GNYV+Q++L PQ A +V++L G+ +
Sbjct: 205 CFENLPEHQTRVLLSEVQEHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQMLHM 264
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-HPE----IVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K L+ + +I E++ P+ V ++ D + NYV+Q A V+
Sbjct: 265 SRHKFASNVVEKALVMAEPSSRRALIEEVMAPRPDGPNPFVSMMKDQFANYVLQRALMVA 324
Query: 533 QGRRIRQTLYDLV 545
+ ++ L +LV
Sbjct: 325 DQDQ-KEALVELV 336
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 163/338 (48%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GRII + D+ G RF+Q+K++ + + +EV+ LM
Sbjct: 648 NRARRVELSDITGRIIEYSADQHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFG 707
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 708 NYVIQKFFEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 756
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 757 DQKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGC 816
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + +++ I D ++ +A VL++ YGNYV Q++L + ++ +LA
Sbjct: 817 RVIQRVLEHCGGTSQSQCIVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLA 876
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I +I+ E ++ ++ D Y NYV+Q
Sbjct: 877 GQVVTMSQNKFASNVIEKCFQHGDMAERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQK 936
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L V + L+ + YGK+++++V
Sbjct: 937 ILETCNENQ-RELLVSRVKGHMQALRKYTYGKHIVSRV 973
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 227 RARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
R H TS S ++E+ ++A+D+ G Q ++ N + I+ ++ +
Sbjct: 821 RVLEHCGGTSQSQCIVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVV 880
Query: 285 ELMRHQSANHLIQKLI--GVLNEEQM-TKLILSVVSSQQRLLRICDDLSGSRVMQKLLDA 341
+ +++ A+++I+K G + E + + I+ LL + D + V+QK+L+
Sbjct: 881 TMSQNKFASNVIEKCFQHGDMAERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQKILET 940
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQ 384
+ Q+ LLVS +K +L K +G H++ R Q
Sbjct: 941 --------CNENQRELLVSRVKGHMQALRKYTYGKHIVSRVEQ 975
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 154/293 (52%), Gaps = 18/293 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q K++ N + + I E+ + +LM+ N++IQK
Sbjct: 490 LKDIYNYVVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKF 549
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +++ + ++ RV+QK L + + EQQ+ LV
Sbjct: 550 FEHGNQVQKKALASQM---KGKMVSLSTEMYACRVVQKAL--------EHVLVEQQAELV 598
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ V + K +GNHV+++ ++ P Y +++ I + L+ GC ++Q +
Sbjct: 599 KELEVEIVRIIKDANGNHVVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMM 658
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ KA ++ ++ +A +L+ YGNYV+Q+I+ P+ V++ + G+ LS
Sbjct: 659 EHGSDADKATIMHELHQHAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSK 718
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-----VQLIL-DPYGNYVIQ 526
K +SNVV++C++ SG + I +II P I +QL++ D Y NYV+Q
Sbjct: 719 HKLASNVVERCIV-SGTAEDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQ 770
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ A D+ G RF+Q+K++ P D + + E+ + ++LM N++ QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K L+ R+L++ + G RV+QK LD L EQ++ +V
Sbjct: 351 F--EHGDQLQKAALAK-KMDGRVLQLSMQMYGCRVVQKALD--------HLLNEQRAKIV 399
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + KS + NHV++R + PP D + +LA GC +LQ
Sbjct: 400 AELEPHILECVKSSNANHVVQRIINTGPPQSIPD---SFIGHVEELAKHPYGCRVLQKTF 456
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K L+ ++ L+E +GNYV+Q ++ + P+ V++QL GR +
Sbjct: 457 ENLDDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFAR 516
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHP-----EIVQLILDPYGNYVIQT---AWDV 531
K +SNVV+K L+ + +I+E+I ++ L+ D Y N+ +QT A D
Sbjct: 517 HKFASNVVEKALIHADPADRRVLIDELIGMQLDGTNQVGMLLRDAYANFPLQTGMFAADP 576
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKN 570
+Q R+ L ++V+ P L+ GK + ++ +N
Sbjct: 577 AQ----REELLEIVLPLLPPLRHTPVGKRIEGRLAQMEN 611
>gi|218202388|gb|EEC84815.1| hypothetical protein OsI_31896 [Oryza sativa Indica Group]
Length = 988
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 165/338 (48%), Gaps = 17/338 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
RT + +++G+I+ + D+ G RF+Q+K++ + +++ +EV+ ELM N
Sbjct: 643 RTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGN 702
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK + +Q ++ + + + + G RV+QK L+ + E
Sbjct: 703 YVIQKFFEKGSPQQKREIANKLAG---HVFSLSLQMYGCRVIQKALEV--------IDLE 751
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q+ +LV L + +GNHVI++C++ P ++ L+ L+ GC
Sbjct: 752 QKIVLVGELDGHVLRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCR 811
Query: 414 LLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + + I D ++ +A +L++ YGNYVVQ++L ++ +LAG
Sbjct: 812 VIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAG 871
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTA 528
+ +S K +SNV+++C G + ++ EI++ E ++ ++ D Y NYV+Q
Sbjct: 872 QVVPMSQNKFASNVIERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKM 931
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ ++ L V + P L+ + Y K++++ V
Sbjct: 932 LTTCNEQH-KEILLSRVKIHLPLLKKYTYAKHIVSLVE 968
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 323 LRICDDLSGSRVMQKLLDA-GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+ + ++ G + +K D + + ++ + ++ +K V S +G+ I++
Sbjct: 612 MPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQ 671
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L+ + L E+ + L+L TD G ++Q +QK + + + + L
Sbjct: 672 KLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSL 731
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
S YG V+Q L + + +V +L G + ++V+QKC +E + G
Sbjct: 732 SLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKC-IECIPLEHIG 790
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
+ + ++ +L + YG VIQ + + D ++ ++ L YG V
Sbjct: 791 FLVSSFQC-QVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYV 849
Query: 562 LAKV--RGNK 569
+ V +GN+
Sbjct: 850 VQHVLEKGNE 859
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 169/339 (49%), Gaps = 30/339 (8%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+L ++ + D+ G RF+Q+K++ P D +++ EV+ H LM N+++QK +
Sbjct: 20 DLAEHVVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKFLA 79
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
EQ+ + + + +L + + G RV+QK L+ + ++ Q LV+
Sbjct: 80 NGTPEQIDAIAGEL---KGHVLSLSLQMYGCRVIQKALEV--------IDEDAQCALVAE 128
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC--------- 412
L+ + +GNHV+++C++ P + ++E N L L+T GC
Sbjct: 129 LEGHVSRCVRDQNGNHVVQKCIECVAPAKIQFIVEAFYGNVLSLSTHPYGCRVIQARSIH 188
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
+L++C P EQK+ I D ++ A L++ YGNYVVQ++L ++ LA
Sbjct: 189 WVLEHCTP----EQKSEGIMDEILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLA 244
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ L+ K +SNV++KCL G + +I+E++ + + ++ D + NYV+Q
Sbjct: 245 GQIVLLAQHKFASNVIEKCLTYCGASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQK 304
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+V + Q L + V + L+ YGK+++A+V
Sbjct: 305 LLEVCDDGQRDQLLTRMRV-HLGNLKKFTYGKHIVARVE 342
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L ++AE+ ++ ++D+ G +Q + A E + +V+ A+ L +GNYVVQ
Sbjct: 18 LGDLAEHVVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKF 77
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
L P+ + +L G +LSL V+QK L E+ ++ E+ H + +
Sbjct: 78 LANGTPEQIDAIAGELKGHVLSLSLQMYGCRVIQKALEVIDEDAQCALVAELEGH--VSR 135
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ D GN+V+Q + +I Q + + N L +H YG V+
Sbjct: 136 CVRDQNGNHVVQKCIECVAPAKI-QFIVEAFYGNVLSLSTHPYGCRVI 182
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 623 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATADEKNMVYEEIMPQALALMTDVFG 682
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L ++ + +L + + G RV+QK ++ +
Sbjct: 683 NYVIQKFFEHGLPPQRRELAEKLIDN---VLPLSLQMYGCRVIQKAIEV--------VDL 731
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P D + ++ + + L+T GC
Sbjct: 732 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEDNIEFIISTFFGHVVTLSTHPYGC 791
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + +++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 792 RVIQRVLEHCHDPDTQRKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 851
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 852 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 911
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 912 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARV 948
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H T +EE+ + ++A+D+ G +Q ++ P + +I+ E+ + ++ + +
Sbjct: 802 HDPDTQRKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 861
Query: 291 SANHLIQKLI---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
A+++++K + G E + +L + L + D + V+QK+L+
Sbjct: 862 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLET------ 915
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+Q+ L+++ +K +L K +G H++ R
Sbjct: 916 --CDDQQRELILTRIKVHLNALKKYTYGKHIVARV 948
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 173/339 (51%), Gaps = 24/339 (7%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I+ ++ D+ GCRFLQKK+D I ++I +++ ++L +L+ + N+LIQKLI L+
Sbjct: 271 ILKLSVDQYGCRFLQKKLDLDVSIK-DVIFNKIFNNLIDLIINPFGNYLIQKLIDYLSNY 329
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD--AGEYPTRQQLTQEQQSLLVSALK- 363
Q LI + L I + G+R +QK++D + Y + Q + + + +
Sbjct: 330 QKDLLIEKI---HTYLFLISINQYGTRSLQKIIDKVSNTYQIDLIIKGLQINDVTNGIDD 386
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDLATDRSGCCLLQYCIPL 421
N V L K +GNHVI++C+ KFPP+ + +++ I N + ++T + GCC+LQ +
Sbjct: 387 NNIVKLIKDLNGNHVIQKCIFKFPPEKFQFIIDSICINNNIVRISTHKHGCCVLQKLLNN 446
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF------ 475
A Q + ++ L +GNY++Q++ L + T+ ++ L +F
Sbjct: 447 ANFNQILNIAKMLLIYLDDLINDQFGNYIIQFLFELNFLK-TSKNISFLIDEFFNKIYNN 505
Query: 476 --ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTA--- 528
LS K SSNVV+K + +Q+ + EII+ + LI D +GNYVIQT
Sbjct: 506 LIQLSCLKFSSNVVEKFIKILKFKQNYLYLTEIIKLVDYNFELLIKDKFGNYVIQTLIDQ 565
Query: 529 -WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+DVS+ L + P ++S Y + + K++
Sbjct: 566 FYDVSELSSEMNKLIVNIKSYLPAIKSAPYARKIQLKIQ 604
>gi|115479929|ref|NP_001063558.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|113631791|dbj|BAF25472.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|215678529|dbj|BAG92184.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641849|gb|EEE69981.1| hypothetical protein OsJ_29881 [Oryza sativa Japonica Group]
Length = 988
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 165/338 (48%), Gaps = 17/338 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
RT + +++G+I+ + D+ G RF+Q+K++ + +++ +EV+ ELM N
Sbjct: 643 RTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGN 702
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK + +Q ++ + + + + G RV+QK L+ + E
Sbjct: 703 YVIQKFFEKGSPQQKREIANKLAG---HVFSLSLQMYGCRVIQKALEV--------IDLE 751
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q+ +LV L + +GNHVI++C++ P ++ L+ L+ GC
Sbjct: 752 QKIVLVGELDGHVLRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCR 811
Query: 414 LLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + + I D ++ +A +L++ YGNYVVQ++L ++ +LAG
Sbjct: 812 VIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAG 871
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTA 528
+ +S K +SNV+++C G + ++ EI++ E ++ ++ D Y NYV+Q
Sbjct: 872 QVVPMSQNKFASNVIERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKM 931
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ ++ L V + P L+ + Y K++++ V
Sbjct: 932 LTTCNEQH-KEILLSRVKIHLPLLKKYTYAKHIVSLVE 968
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 323 LRICDDLSGSRVMQKLLDA-GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+ + ++ G + +K D + + ++ + ++ +K V S +G+ I++
Sbjct: 612 MPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQ 671
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L+ + L E+ + L+L TD G ++Q +QK + + + + L
Sbjct: 672 KLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSL 731
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
S YG V+Q L + + +V +L G + ++V+QKC +E + G
Sbjct: 732 SLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKC-IECIPLEHIG 790
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
+ + ++ +L + YG VIQ + + D ++ ++ L YG V
Sbjct: 791 FLVSSFQC-QVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYV 849
Query: 562 LAKV--RGNK 569
+ V +GN+
Sbjct: 850 VQHVLEKGNE 859
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 163/331 (49%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L G I+ ++D+ G RF+Q+K++ + ++ E++ + LM N++IQK
Sbjct: 19 LRDLAGHIVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKF 78
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EEQ L + + +L + + G RV+QK L+ + Q LV
Sbjct: 79 FEFGSEEQKHHLASCI---RGHVLPLALQMYGCRVIQKALEC--------IPPNVQHELV 127
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + +++ L+T GC ++Q +
Sbjct: 128 MELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRIL 187
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ L + YGNYV+Q++L P+ + +V QL G LS
Sbjct: 188 EHCLTEQTLPILNEMHDQTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQ 247
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I+E+ H + ++ D + NYV+Q DV++
Sbjct: 248 HKFASNVVEKCVSFASRTERALLIDEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEP 307
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + L+ + YGK++LAK+
Sbjct: 308 AQ-RKLLMHRIRPHVATLRKYTYGKHILAKL 337
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 164/338 (48%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ RI+ + D+ G RF+Q+K++ + + +EV+ LM
Sbjct: 645 NRARRVELSDITSRIVEYSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFG 704
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ L
Sbjct: 705 NYVIQKFFEHGTPEQRRDLGTKLVG---HVLPLSLQMYGCRVVQKALEV--------LEL 753
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 754 DQKIELVLELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGC 813
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A VL++ YGNYV Q++L A ++++LA
Sbjct: 814 RVIQRVLEHCGGDSQGQCIIDEILQSACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLA 873
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI++ E ++ ++ D Y NYV+Q
Sbjct: 874 GQVVTMSQNKFASNVIEKCFQHGDFAERDLLIREIVQQTEGNDTLLAMMKDQYANYVVQK 933
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ L V + L+ + YGK++ ++V
Sbjct: 934 ILETCNDQQ-RELLVSRVKGHLQALRKYTYGKHIASRV 970
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 531 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 590
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + E Q+ +V
Sbjct: 591 FEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLELQTKMV 639
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 640 AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVL 699
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 700 EHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 759
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL+ + +I E++ E +++++ D +GNYV+Q +
Sbjct: 760 QQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDD 819
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 820 QQ-REMILTRIKTHLNTLKKYTYGKHIVARV 849
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 335 MQKLLDAGEYPT--RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
M +DA P+ + + + +S +S + V S +G+ I++ L+ +
Sbjct: 505 MGGKMDANLMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKD 564
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
+ EI L L TD G ++Q Q L ++ LS YG V+Q
Sbjct: 565 MVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQLIGRVLALSLQMYGCRVIQ 624
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
+ + ++ +VA+L G + ++V+QKC+ + II+ + ++
Sbjct: 625 KAIEVVDLELQTKMVAELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTF--YGQV 682
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V L PYG VIQ + + +Q + D ++ + L YG V+ V
Sbjct: 683 VMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHV 735
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 535 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 594
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + E Q+ +V
Sbjct: 595 FEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLELQTKMV 643
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 644 AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVL 703
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 704 EHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 763
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL+ + +I E++ E +++++ D +GNYV+Q +
Sbjct: 764 QQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDD 823
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 824 QQ-REMILTRIKTHLNTLKKYTYGKHIVARV 853
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 335 MQKLLDAGEYPT--RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
M +DA P+ + + + +S +S + V S +G+ I++ L+ +
Sbjct: 509 MGGKMDANLMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKD 568
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
+ EI L L TD G ++Q Q L ++ LS YG V+Q
Sbjct: 569 MVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQLIGRVLALSLQMYGCRVIQ 628
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
+ + ++ +VA+L G + ++V+QKC+ + II+ + ++
Sbjct: 629 KAIEVVDLELQTKMVAELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTF--YGQV 686
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V L PYG VIQ + + +Q + D ++ + L YG V+ V
Sbjct: 687 VMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHV 739
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 182/371 (49%), Gaps = 21/371 (5%)
Query: 204 FLSDHHHLGSSTNASSRY--NNFYARARHHHHRTSYSSIE--ELRGRIILVAKDEQGCRF 259
F S+ +LG + S Y +NF + S E E+ ++ + D+ G RF
Sbjct: 669 FPSNLRNLGGWNSDPSGYMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRF 728
Query: 260 LQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQ 319
+Q+K++ + +M+ E++ LM N+++QK + Q +L +
Sbjct: 729 IQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG-- 786
Query: 320 QRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVI 379
+L + + G RV+QK ++ + +Q++ +V+ L + + +GNHVI
Sbjct: 787 -HVLALSLQMYGCRVIQKAIEV--------VDLDQKTKMVTELDGHIMRCVRDQNGNHVI 837
Query: 380 KRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANA 438
++C++ P D + ++ + L+T GC ++Q + + ++ D ++ +
Sbjct: 838 QKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTYPKTQEIVMDEILQSV 897
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQ 498
+L++ YGNYVVQ++L P + ++ +LAG+ +S K +SNVV+KCL G +
Sbjct: 898 CMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAE 957
Query: 499 STGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQS 554
+INE++ + + ++ D +GNYV+Q + ++ R+ + V + L+
Sbjct: 958 REVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQ-RELILSRVKVHLSALKK 1016
Query: 555 HMYGKNVLAKV 565
+ YGK+++A+V
Sbjct: 1017 YTYGKHIVARV 1027
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 175/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 535 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 594
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + E Q+ +V
Sbjct: 595 FEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLELQTKMV 643
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 644 AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVL 703
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 704 EHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 763
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL+ + +I E++ E +++++ D +GNYV+Q +
Sbjct: 764 QQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDD 823
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 824 QQ-REMILTRIKTHLNTLKKYTYGKHIVARV 853
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 335 MQKLLDAGEYPT--RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
M +DA P+ + + + +S +S + V S +G+ I++ L+ +
Sbjct: 509 MGGKMDANLMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKD 568
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
+ EI L L TD G ++Q Q L ++ LS YG V+Q
Sbjct: 569 MVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQLIGRVLALSLQMYGCRVIQ 628
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
+ + ++ +VA+L G + ++V+QKC+ + II+ + ++
Sbjct: 629 KAIEVVDLELQTKMVAELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTF--YGQV 686
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V L PYG VIQ + + +Q + D ++ + L YG V+ V
Sbjct: 687 VMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHV 739
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 167/317 (52%), Gaps = 17/317 (5%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ N + E + EV+ +LM N++IQK + EQ +L
Sbjct: 21 DQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRMELA 80
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
+ ++L++ + G RV+QK L+ E + +L QE L +
Sbjct: 81 EKLSG---QILQLSLQMYGCRVIQKALEVIELDQKAKLAQE--------LDGHVMRCVHD 129
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHVI++C++ P ++ + ++ + L+T GC ++Q + +E +++ I
Sbjct: 130 QNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIV 189
Query: 433 D-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
D ++ ++Y+L++ YGNYV Q++L P + ++++L G+ +S K +SNVV+KCL
Sbjct: 190 DEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCL 249
Query: 492 LESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+ + +I EII E ++ ++ D + NYV+Q + S ++ ++ L +
Sbjct: 250 KHADAAERELMIGEIIGQSEENDNLLIMMKDQFANYVVQKILETSNDKQ-KEILLSRINA 308
Query: 548 NSPFLQSHMYGKNVLAK 564
+ L+ + YGK+++A+
Sbjct: 309 HLNALKKYTYGKHIVAR 325
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 121/245 (49%), Gaps = 36/245 (14%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDD-LHELMRHQSANHLIQKL 299
E+L G+I+ ++ GCR +QK + E +D + L++ +D + + Q+ NH+IQK
Sbjct: 81 EKLSGQILQLSLQMYGCRVIQKAL-EVIELDQKAKLAQELDGHVMRCVHDQNGNHVIQKC 139
Query: 300 IGVLNEEQMTKLILSVVSSQ--------------QRLLRIC-DDLSGSRVMQKLLDA--- 341
I + E + + I+S Q QR+L C D+L ++ ++L++
Sbjct: 140 IECVPAEHI-EFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESSYL 198
Query: 342 ------GEYPTRQQLTQ---EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
G Y T+ L + ++S ++S L V +S+ + ++V+++CL+ +
Sbjct: 199 LAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHADAAERE 258
Query: 393 DLLEEIA------ENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
++ EI +N L + D+ ++Q + + ++QK L++ + A+ L +++Y
Sbjct: 259 LMIGEIIGQSEENDNLLIMMKDQFANYVVQKILETSNDKQKEILLSRINAHLNALKKYTY 318
Query: 447 GNYVV 451
G ++V
Sbjct: 319 GKHIV 323
>gi|218185985|gb|EEC68412.1| hypothetical protein OsI_36587 [Oryza sativa Indica Group]
Length = 1013
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
Query: 394 LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQY 453
LL+ A L LA D+ GCC++Q CI + +EQK L+ + ++A LSE YGNYV+Q+
Sbjct: 723 LLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALGLSEDQYGNYVIQF 782
Query: 454 ILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIV 513
++ L I T+ +V +L G + LS+ KC S+VV+ CL ++ E II+E++ P++
Sbjct: 783 VVNLGIEWATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADPKLP 842
Query: 514 QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQS 554
++ DP+GN+VIQTA +G + + + + ++P LQ+
Sbjct: 843 HIMADPFGNFVIQTALKECKG-ELHSSFVEAIRPHAPALQN 882
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 146/283 (51%), Gaps = 18/283 (6%)
Query: 286 LMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAG-EY 344
L + Q +IQK I N+EQ L+ + SS L + +D G+ V+Q +++ G E+
Sbjct: 734 LAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSA---LGLSEDQYGNYVIQFVVNLGIEW 790
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPP-DYTKDLLEEIAENCL 403
T S +V LK LS G+HV++ CL++ D + E +A+ L
Sbjct: 791 AT---------SKIVKELKGNFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADPKL 841
Query: 404 -DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQV 462
+ D G ++Q + + E + + + +A L NYV+Q+++ L I
Sbjct: 842 PHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDV--NYVIQFVVNLGIEWA 899
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGN 522
T+ +V +L G + LS+ KC S+VV+ CL ++ E II+E++ P++ ++ DP+GN
Sbjct: 900 TSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADPKLPHIMADPFGN 959
Query: 523 YVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+VIQTA +G + + + + ++P LQ+ +Y K VL+K
Sbjct: 960 FVIQTALKECKG-ELHSSFVEAIRPHAPALQNDVYAKRVLSKT 1001
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 24/155 (15%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
+Y S++E+ GRI ++AKD+ GCRFLQK E D E +L+E+ID ELM N+L
Sbjct: 411 NYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKEDFEKVLAEIIDHFGELMIDPFGNYL 470
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
+QKL+ +++Q T+ ++ S V QK++D P EQ
Sbjct: 471 VQKLLEECSDDQRTQ----------------KNIQDSHV-QKVIDTINTP-------EQI 506
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
S +VSAL + L +G+HV +RCL+K P+Y
Sbjct: 507 SKVVSALSPGAMRLMTDTNGSHVAQRCLKKLLPEY 541
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 452 QYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
+Y L +K Q+ V ++AGR + L+ + +QK E +E ++ EII H
Sbjct: 400 EYDLAMKSTQLNYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKEDFEKVLAEIIDH-- 457
Query: 512 IVQLILDPYGNYVIQTAW-DVSQGRRIRQTLYD 543
+L++DP+GNY++Q + S +R ++ + D
Sbjct: 458 FGELMIDPFGNYLVQKLLEECSDDQRTQKNIQD 490
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 159/309 (51%), Gaps = 14/309 (4%)
Query: 259 FLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS 318
F+Q+K++ + +M+ +E+I + LM N++IQK EQ T L V
Sbjct: 394 FIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQKV--- 450
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
+ +L + + G RV+QK L++ + EQQ +V L + K +GNHV
Sbjct: 451 RGHVLALALQMYGCRVIQKALES--------IPPEQQQEVVRELDGHVLKCVKDQNGNHV 502
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA 438
+++C++ P + ++ A L+T GC ++Q + EQ A ++A++ A+
Sbjct: 503 VQKCIECVEPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVLAELHAHT 562
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQ 498
L + YGNYVVQ++L + + +VA + G+ LS K +SNVV+KC+ + +
Sbjct: 563 DQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHATRNE 622
Query: 499 STGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+I+E+ + + ++ D Y NYV+Q DV++ + R+ L + + L+ +
Sbjct: 623 RALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEPTQ-RKVLMHKIRPHIGSLRKYT 681
Query: 557 YGKNVLAKV 565
YGK+++AK+
Sbjct: 682 YGKHIIAKL 690
>gi|260942643|ref|XP_002615620.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
gi|238850910|gb|EEQ40374.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 39/345 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ KD+ G RF+Q+K+ + EM+ SE+ D ++LM N++IQK
Sbjct: 436 LKDIHGHVVEFTKDQHGSRFIQQKLPSATAEEKEMVFSEIQDISYDLMTDVFGNYVIQKF 495
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q +++L + L + + G RV+Q+ L+A + E Q +V
Sbjct: 496 FEFGSDSQ-RQILLGYMKGNIHELSL--QMYGCRVVQRALEA--------IPLEDQIEIV 544
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
LK+ +S +K +GNHVI++ ++K P + + +L+ + + L+T GC ++Q +
Sbjct: 545 EELKDHVLSCAKDQNGNHVIQKSIEKIPFENVRFILDSLDSHIYHLSTHPYGCRVIQRLL 604
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ E + ++A++ + L + YGNYV+Q+IL P ++ S
Sbjct: 605 EYSDIEDQQHILAELNRFLFYLIQDQYGNYVIQHILERGTPSEKEEIFEVAFSSIVNFSK 664
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ------------LILDPYGNYVIQT 527
K +SNV++KC+ EQ I E++ E ++ ++ D Y NYVIQ
Sbjct: 665 HKFASNVIEKCIKHGTLEQRKRIWREVMLGNEDLEKETVADDSPLALMMKDQYANYVIQK 724
Query: 528 AWDVSQGR---------RIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ + ++RQ L L + NS YGK++ +
Sbjct: 725 LVECFHAKSKEKKDLVVKLRQYLKQLSMKNS-------YGKHLAS 762
>gi|253741511|gb|EES98380.1| Pumilio-family RNA-binding protein, putative [Giardia intestinalis
ATCC 50581]
Length = 652
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 36/379 (9%)
Query: 166 LGLPRP---NNLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYN 222
+P P + T +L T + T P L+H LSD H+ ++ +S
Sbjct: 251 FNMPSPVLTRSATCSMDLSQNTPQRVPTVRPCPLSFTLTHSALSDPHNSATTAFSSEPVA 310
Query: 223 NFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQK-KVD--ERNPIDIEMILSE- 278
H R +++L K+ GC+ LQ+ VD +++ +++ ++E
Sbjct: 311 PQPDPLAGEHER-----------KLVLSFKESTGCKALQQYMVDFPDKSHYLLDVFITEY 359
Query: 279 -VIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQK 337
+ L+ H + N+ QK+I + Q +++L + Q L IC +L G+R +QK
Sbjct: 360 GTPSLMEGLLIHPAGNYCFQKIIEGSDATQRLRILLLI---QDSLFDICHNLHGTRSIQK 416
Query: 338 LLDAGEYPTRQQLTQEQQSLLVSALK--NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
LL+ R L E++++ L + + L +GNH ++RC++ F P +
Sbjct: 417 LLE------RVSL-DEEKAIFAQQLGTGDRIIKLIMDINGNHCVQRCIEAFSPKDCAFIY 469
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+I + ++T + GCC++Q C+ L E Q+ +++ + + L +GNYV QY L
Sbjct: 470 SQIVRELVLVSTHQHGCCIIQRCLDLCSEAQRVQIVTAIKDHVMELIVDRFGNYVFQYSL 529
Query: 456 -----GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP 510
GL P T D++ + G+ L K SS+ ++KCL ++ I ++
Sbjct: 530 EKASNGLCGPITTDDLIRPVLGQEAFLVNQKFSSHAIEKCLKYGSKKMRALITENVMASG 589
Query: 511 EIVQLILDPYGNYVIQTAW 529
+ L +D +GNYVIQ A+
Sbjct: 590 SFLSLAMDKFGNYVIQKAF 608
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 162/338 (47%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GRI+ + D+ G RF+Q+K++ + + +EV+ LM
Sbjct: 426 NRARRVELSDITGRIVEYSADQHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFG 485
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 486 NYVIQKFFEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 534
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 535 DQKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGC 594
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + I D ++ +A +L++ YGNYV Q++L + ++ +LA
Sbjct: 595 RVIQRVLEHCGGNSQGQCIIDEILQSACILAQDQYGNYVTQHVLERGKAHERSQIITKLA 654
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I +I+ E ++ ++ D Y NYV+Q
Sbjct: 655 GQVVTMSQNKFASNVIEKCFQHGDIAERDLLIRQIVEQTEANDNLLAMMKDQYANYVVQK 714
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L V + L+ + YGK+++++V
Sbjct: 715 ILETCNENQ-RELLLSRVKGHMQALRKYTYGKHIVSRV 751
>gi|440638601|gb|ELR08520.1| hypothetical protein GMDG_03219 [Geomyces destructans 20631-21]
Length = 976
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 166/333 (49%), Gaps = 25/333 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ + G ++ + D+ G RF+Q K++ N + E I E+ + +LM N++IQKL
Sbjct: 545 LKNIYGHVVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKL 604
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K IL+ + + ++ + + G RV+QK L+ + +QQ+ LV
Sbjct: 605 FEHGN--QIQKKILAEIM-KNHVIELSLQMYGCRVVQKALE--------HVLADQQAELV 653
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC----LL 415
L+ + K +GNHVI++ +++ P + + +L+ LAT GC +L
Sbjct: 654 RELQADVLKCVKDQNGNHVIQKAIERCPTEQVQFILDAFRTQVHTLATHPYGCRVIQRML 713
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+YC P Q ++ ++ A A +L YGNYVVQ+++ P+ A +++ + +
Sbjct: 714 EYCTPPDQ----TSVLKELFACAQMLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVL 769
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQTAWD 530
LS K +SNVV++ + EQ I+ +I+ +QL++ D YGNYVIQ
Sbjct: 770 TLSKHKFASNVVERSISCGTTEQRQTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLLG 829
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ QG R + + L+ + YGK + A
Sbjct: 830 LLQGDE-RDAFVEDIKPQLMQLKKYNYGKQIAA 861
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 41/348 (11%)
Query: 256 GC-RFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILS 314
GC R L E P IL+E + E M N+L QK++ + E+ L+ S
Sbjct: 231 GCQRHLIDLPKEDGPSAATAILNEGLTFWAEAMVDPFGNYLFQKILERITPEERVTLVSS 290
Query: 315 VVSSQQRLLRICDDLSGSRVMQKLLDA--------------------------------- 341
V + RL+ +L G+R +QK+++
Sbjct: 291 VST---RLVNASLNLHGTRSVQKIVEVCAIDEEDREDSDDDEEDSSESKSEAKSEDSDSK 347
Query: 342 GEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN 401
+++ +L AL+ L HGNH I+R L K P T+ + + +A +
Sbjct: 348 SAGKKKKKKKDSAAKILTDALRPSAARLCIDSHGNHAIQRILLKLPYQRTQFIFDAVAAS 407
Query: 402 CLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
D+A R GCC++Q C+ ++ L+ +V + L + +YGNYVVQY+L +
Sbjct: 408 VEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNYVVQYVLDVCGDD 467
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYG 521
+ + G+ L++ K SSNV++KCL + +NE+ + +L++DP+G
Sbjct: 468 EVHAICESVVGKVCVLAVQKFSSNVMEKCLERCTDRVREEYLNELNDSDRLRELMMDPFG 527
Query: 522 NYVIQTAWDVS---QGRRIRQTLY-DLVVDNSPFLQSHMYGKNVLAKV 565
NYV+Q A VS Q R+ +T+ L + +++ G+ +L K+
Sbjct: 528 NYVVQRALSVSTHAQAIRLVETMKPHLSTSSGGGIRNTAGGRRILGKI 575
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
VA+ GC +Q+ +D R+ ++ +++ ELM+ N+++Q ++ V ++++
Sbjct: 411 VARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNYVVQYVLDVCGDDEVH 470
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
+ SVV ++ + S VM+K L+ R++ E + L
Sbjct: 471 AICESVVG---KVCVLAVQKFSSNVMEKCLERCTDRVREEYLNELND------SDRLREL 521
Query: 370 SKSPHGNHVIKRCL 383
P GN+V++R L
Sbjct: 522 MMDPFGNYVVQRAL 535
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 170/343 (49%), Gaps = 32/343 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQK------KVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+ E+ G + + D+ G RF+Q+ K++ N D++ EV+ + LM N
Sbjct: 16 LREILGHVYEFSLDQHGSRFIQQARGGGLKLECVNNEDVDAAFGEVVPRILHLMTDVFGN 75
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSS--QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
+++QK + E T + +S +L++ + G RV+QK L+ T
Sbjct: 76 YVVQKFL-----EHGTPQHRACISKALHGHVLQLSLQMYGCRVVQKALEV--------FT 122
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
++QQ LVS L + + +GNHVI++C++ P LL+ + L+T G
Sbjct: 123 EDQQVDLVSELDGHVMRCVRDQNGNHVIQKCIECVPTHRIAGLLDNFLMCVVPLSTHPFG 182
Query: 412 CCLLQYCIPLAQEEQK-ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
C ++Q + +++++ A ++AD++ A L++ YGNYV+Q++L P+ + ++ L
Sbjct: 183 CRIIQRILEHVRDQRRRAAVMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSL 242
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII--------RHPEIVQLILDPYGN 522
+ LS+ K +SNV++KCL+ IIN ++ R P +I D +GN
Sbjct: 243 SATVVQLSMHKFASNVIEKCLIHGSTADRDLIINRMLGPLNISPKRGPW-TAMIKDQFGN 301
Query: 523 YVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
YV+Q +V + R+ + V L+ YGK+++A+V
Sbjct: 302 YVVQKVLEVCTDVQ-REAMLARVRAQLHALKRFTYGKHIVARV 343
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 155/306 (50%), Gaps = 16/306 (5%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H+ R+ ++++ I + D+ G RF+Q+K++ N + E + E+ + +LM
Sbjct: 532 HNSRSKRYELKDIYDYICEFSGDQHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDV 591
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
N++IQK + +Q K IL+ + +L + + G RV+QK L+ +
Sbjct: 592 FGNYVIQKFF--EHGDQSQKRILAN-KMKGHVLTLSLQMYGCRVVQKALE--------HV 640
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
+QQ+ +V L+N + K +GNHVI++ +++ P + + +++ + L+
Sbjct: 641 LVDQQADMVKELENNVLRCVKDQNGNHVIQKAIERVPAQHIQFIIDAFIGHVSSLSVHGY 700
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GC ++Q + +E + +++++ A A L YGNYV Q+I+ P A ++ +
Sbjct: 701 GCRVIQRMLEHCEEPARRAILSELHACAPTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIV 760
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVI 525
+ A + K +SNVV+KCL+ +++ I+ +I E +V LI D YGNYVI
Sbjct: 761 KTQLLAFAKHKFASNVVEKCLVFGSDDERREIMLKICEKTERGESTLVMLIKDGYGNYVI 820
Query: 526 QTAWDV 531
Q D
Sbjct: 821 QKLLDT 826
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 165/332 (49%), Gaps = 19/332 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ + D+ G RF+Q+K++ + +++ E++ + +LM N++IQK+
Sbjct: 541 LGDIVGSIVEFSGDQHGSRFIQQKLETCTNDEKQLVFDEIMPNALQLMTDVFGNYVIQKI 600
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q K IL+ + + +L + + G RV+QK + + EQQ+ L+
Sbjct: 601 FEYGSAAQ--KQILAELM-EGSVLELSLQMYGCRVVQKAF--------EHVPIEQQARLI 649
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHVI++ +++ ++ K +++ LAT GC ++Q
Sbjct: 650 HELDGNVLKCVKDQNGNHVIQKAIERVSAEHIKFIIDAFHGQVYALATHPYGCRVIQRIF 709
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EE+ L+ ++ A L + YGNYV+Q+IL P V+ ++ G+ +S
Sbjct: 710 EHCSEEETQPLLGELHRYAISLIQDQYGNYVIQHILERGRPSDKLFVINKVKGQILTMSK 769
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV-SQ 533
K +SNVV+KC+ II+E+ + ++ D + NYV+Q DV S+
Sbjct: 770 HKFASNVVEKCVAFGSPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKMLDVASE 829
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+++ L + P L+ YGK++++KV
Sbjct: 830 PQKV--MLVTKIKPQLPSLKKFTYGKHLISKV 859
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 167/327 (51%), Gaps = 30/327 (9%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI---GVLNEE 306
+ KD+QG R +Q+ +D P +IE + +I D ELM N++IQKLI + ++
Sbjct: 171 LCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIEYGTIEHKH 230
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q ++I + ++ + G RV+QK A E+ ++ E+ ++ +K
Sbjct: 231 QFMEII------KGHVVELSLHTYGCRVIQK---ACEF-----ISGEELGIIAEEIKGHI 276
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
V + +GNHVI++ ++ P Y+ + EI+ + + GC ++Q I E+
Sbjct: 277 VEFVEDQNGNHVIQKFIEFMPSTYSSLIANEISGYIISFSKHAYGCRVVQKLI-----ER 331
Query: 427 KARLIADVVA-----NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
K LI +V+ N + L+ + YGNYV+Q++L Q V++++ G++ S+ K
Sbjct: 332 KEPLIQNVITSELKNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKK 391
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIRHPE---IVQLILDPYGNYVIQTAWDVSQGRRIR 538
SSNVV+KC+ Q I+EI + +++L+ DPY NYVIQT +V +
Sbjct: 392 YSSNVVEKCVHCCTSAQRDNFIDEICSKKDNEMLLKLMKDPYANYVIQTLVEVMDDDQRS 451
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + ++ N L+ Y K++L ++
Sbjct: 452 KFIEQNILPNVSSLRRVSYSKHLLQRL 478
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 21/236 (8%)
Query: 225 YARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
Y H H +E ++G ++ ++ GCR +QK + + ++ +I E+ +
Sbjct: 223 YGTIEHKHQF-----MEIIKGHVVELSLHTYGCRVIQKACEFISGEELGIIAEEIKGHIV 277
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
E + Q+ NH+IQK I + + LI + +S ++ G RV+QKL++ E
Sbjct: 278 EFVEDQNGNHVIQKFIEFM-PSTYSSLIANEISG--YIISFSKHAYGCRVVQKLIERKEP 334
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
Q+++ S LKN L+ + +GN+VI+ L+ ++ E+ +
Sbjct: 335 LI--------QNVITSELKNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCE 386
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANA-----YVLSEHSYGNYVVQYIL 455
+ + +++ C+ Q+ I ++ + L + Y NYV+Q ++
Sbjct: 387 YSMKKYSSNVVEKCVHCCTSAQRDNFIDEICSKKDNEMLLKLMKDPYANYVIQTLV 442
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
DL D+ G +Q + AQ + L ++ +++ L +GNYV+Q ++ +
Sbjct: 170 DLCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIEYGTIEHK 229
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQK-CLLESGEEQSTGIINEIIRHPEIVQLILDPYGN 522
+ + G LSL V+QK C SGEE GII E I+ IV+ + D GN
Sbjct: 230 HQFMEIIKGHVVELSLHTYGCRVIQKACEFISGEE--LGIIAEEIKG-HIVEFVEDQNGN 286
Query: 523 YVIQ 526
+VIQ
Sbjct: 287 HVIQ 290
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 235 TSYSSI--EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++YSS+ E+ G II +K GCR +QK ++ + P+ +I SE+ +++ +L +Q
Sbjct: 298 STYSSLIANEISGYIISFSKHAYGCRVVQKLIERKEPLIQNVITSELKNNIWDLAVNQYG 357
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQ L+ N++Q L + + + S V++K + R
Sbjct: 358 NYVIQHLLENGNQQQHN---LVISEMKGKFCEYSMKKYSSNVVEKCVHCCTSAQRDNFID 414
Query: 353 EQQSLLVSALKN-ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
E + S N + + L K P+ N+VI+ ++ D +E+
Sbjct: 415 E----ICSKKDNEMLLKLMKDPYANYVIQTLVEVMDDDQRSKFIEQ 456
>gi|67540834|ref|XP_664191.1| hypothetical protein AN6587.2 [Aspergillus nidulans FGSC A4]
gi|40738926|gb|EAA58116.1| hypothetical protein AN6587.2 [Aspergillus nidulans FGSC A4]
gi|259480164|tpe|CBF71045.1| TPA: mRNA binding protein Pumilio 2, putative (AFU_orthologue;
AFUA_6G04310) [Aspergillus nidulans FGSC A4]
Length = 849
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 16/300 (5%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
H + ++++ G I+ + D+ G RFLQ+K++ N + + + E++ + +L +
Sbjct: 449 HGKNKRFELKDIYGHIVEFSGDQYGSRFLQQKIETANSDEKDRVFREILPNFLQLAQDIF 508
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++ QKL N+ Q + + S +++++ G RV+QK L+ +
Sbjct: 509 GNYVAQKLYEHGNQTQKKMMTEDMRS---KVVKLSLSPYGCRVVQKALE--------HVL 557
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+QQ+ LV ++ + +S HGNHVI++ + P YTK L++ +T G
Sbjct: 558 TDQQAWLVREIQPQVLECVESQHGNHVIQKVFEYVPTQYTKGLVDSFRGQVERQSTHSYG 617
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
C ++Q + ++ + ++A++ A A L E YGNYV+Q+I+ + + ++ +
Sbjct: 618 CRVIQRMLEFCEDVDRRFILAEIRACAPRLIEDQYGNYVIQHIIQSGEEEDRSFMIEMVK 677
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQ 526
+ S K +SNVV+K + E Q II + E +++L+ D YGNYV Q
Sbjct: 678 QKLLWYSKHKFASNVVEKSIEFGNEAQRQDIITRLTAKTEGHETQLIELMADQYGNYVFQ 737
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 27/327 (8%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
++ G I+ + D+ G RF+Q+ ++ + D E++ E+ + +LM N++IQK +
Sbjct: 403 DIFGHIVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFME 462
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ +QM K +L + + +L + G RV+QK L EY + +Q+ LV
Sbjct: 463 --HGDQMQKTLL-LEQMKGHVLTLSLQTYGCRVVQKAL---EY-----IQIDQKISLVKE 511
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC----LLQY 417
L + K+ +GNHVI++ ++K P ++ + L+ LAT GC +L+Y
Sbjct: 512 LNGNVLKCIKNQNGNHVIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRMLEY 571
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C Q LI ++ A L YGNY +Q+I+ P+ + +++ + G F
Sbjct: 572 C------SQTRDLIKELHLYAQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRF 625
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+KC+ +E+ +I+EII E ++ +I D Y NYVI+ A DV+
Sbjct: 626 SRHKFASNVVEKCITYGTDEEKKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKALDVA 685
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGK 559
+ R L + + FL+ +++GK
Sbjct: 686 CDDQ-RNKLISEIKPHLQFLKKNVHGK 711
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
S ++EL G ++ K++ G +QK + E+ PI+ I+ +++ ++ L H +I
Sbjct: 507 SLVKELNGNVLKCIKNQNGNHVIQKII-EKVPIEHIQFLINTFQGQIYVLATHPYGCRVI 565
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
Q+++ + Q LI + Q L+R D G+ +Q +++ GE E +S
Sbjct: 566 QRMLEYCS--QTRDLIKELHLYAQNLIR---DQYGNYCIQHIIEKGE--------PEDRS 612
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN-------CLDLATDR 409
++S +K S+ ++V+++C+ + K L++EI E+ L + D+
Sbjct: 613 KIISVVKGNVFRFSRHKFASNVVEKCITYGTDEEKKLLIDEIIESNENGMSFLLPMIKDQ 672
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG 447
+++ + +A ++Q+ +LI+++ + L ++ +G
Sbjct: 673 YANYVIKKALDVACDDQRNKLISEIKPHLQFLKKNVHG 710
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 628 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFG 687
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L ++ + +L + + G RV+QK ++ +
Sbjct: 688 NYVIQKFFEHGLPPQRRELADKLLDN---VLPLSLQMYGCRVIQKAIEV--------VDL 736
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ N + L+T GC
Sbjct: 737 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGC 796
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYV+Q++L P ++ +LA
Sbjct: 797 RVIQRVLEHCHDPDTQSKVMEEIMSTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELA 856
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 857 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 916
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 917 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARV 953
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSANHLIQK 298
+ +++G ++ + D+ G RF+Q+K++ + + + + E++ + L++ N++IQK
Sbjct: 37 LRDIQGHVVEFSGDQHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQK 96
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L + Q+ K +L+ S + +L + + G RV+QK A EY + EQQS+
Sbjct: 97 LFE--HGTQVQKTVLAT-SMETHILSLSLQMYGCRVVQK---AVEY-----ILPEQQSIF 145
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHVI++ +++ P+ + + +L+T GC +LQ C
Sbjct: 146 VKELEPHVLRCVKDANGNHVIQKLIERVAPERL-GFVPSFQGHVWELSTHPYGCRVLQRC 204
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
E+Q L+ ++ + L + +GNYV+QY+L PQ ++ QL G+ A+S
Sbjct: 205 FEHLAEDQTRPLLEELHKHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMS 264
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII--RH---PEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNV +K L+ + +I+EI+ RH I+ ++ D Y NYV+Q A V++
Sbjct: 265 RHKFASNVCEKALVTADSASRRQLIDEIMVPRHDGASPIITMMKDQYANYVLQRAMVVAE 324
Query: 534 G 534
G
Sbjct: 325 G 325
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 171/339 (50%), Gaps = 28/339 (8%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
++ ++R +I AKD+ G RF+Q+K++ + D I + V++ ELM N++IQK
Sbjct: 328 TLLDIRNNVIEFAKDQHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQK 387
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
N +Q +L+ ++ + ++++ + G RV+QK L+ E + ++ E + +
Sbjct: 388 FFEYGNNDQRNQLVATIRGN---VMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQV 444
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD----LATDRSGCCL 414
+ +K+ +GNHVI++ +++ PD + +++ +N D L+ GC +
Sbjct: 445 LKCVKD--------QNGNHVIQKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRV 496
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL----GLKIPQVTADVVAQL 470
+Q + +EQK ++ + + L YGNYV+Q+++ Q+ DV+
Sbjct: 497 IQRVLEYCNDEQKQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSAKDKEQIVKDVIND- 555
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVI 525
+ K +SNV++KCL +E II+++ P ++ ++ DP+ NYV+
Sbjct: 556 --DLLKFAQHKFASNVIEKCLSFGSQEDRNLIIDKVCGDPNDASPPLLLMMKDPFANYVV 613
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
Q DV+ + R+ + + + L+ + +GK++L K
Sbjct: 614 QKMLDVADPQH-RKKITLTIKPHIATLRKYNFGKHILRK 651
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +I N ++ A D+ G +Q + A KA + V+ +A L +GNYV+Q
Sbjct: 329 LLDIRNNVIEFAKDQHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKF 388
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+VA + G L+L V+QK L E+ I+ E+ ++++
Sbjct: 389 FEYGNNDQRNQLVATIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEM--EGQVLK 446
Query: 515 LILDPYGNYVIQTAWDVSQGRRIRQTLYDLVV----DNSPFLQSHMYGKNVLAKV 565
+ D GN+VIQ + + R+ Q + D DN L H YG V+ +V
Sbjct: 447 CVKDQNGNHVIQKVIERVEPDRL-QFIIDAFTKNNSDNVYTLSVHPYGCRVIQRV 500
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 625 NKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFG 684
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 685 NYVIQKFFEHGLPPQRRELADKLFDN---VLPLSLQMYGCRVIQKAIEV--------VDL 733
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ N + L+T GC
Sbjct: 734 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGC 793
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYV+Q++L P ++ +LA
Sbjct: 794 RVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELA 853
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 854 GKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQK 913
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 914 VLETCDDQQ-RELILGRIKVHLNALKKYTYGKHIVARV 950
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 26/329 (7%)
Query: 244 RGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
R I + K GC+ L ++ + + + I+ M+H AN L Q++ L
Sbjct: 145 RSDICKLVKQRHGCQLLLHQLQLGSSLASQEIMETCCLHFGIWMKHPIANFLCQQVWKCL 204
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDA-GEYPTRQQLTQEQQSLL 358
+E+Q ++ QR I + +RV+Q ++ + GE E +++
Sbjct: 205 SEQQRMDIL-------QRHWDILPKAALHTYSTRVVQVMISSCGEEEN------ENRNVC 251
Query: 359 VSALKNITVSLSK----SPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+S L++I S++K +G HVI+ C + + + L I EN L+LAT R GCC+
Sbjct: 252 ISYLQSILSSVAKFLFKDVNGAHVIQHCFLYWSSEDNQFLYHTIQENFLELATHRQGCCM 311
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q + A Q + +++ + +VL ++GNYVVQ+IL K P+ D++ +L G +
Sbjct: 312 IQTSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHW 371
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-PEIVQLILDPYGNYVIQTAWDV-S 532
+ +S+ K SSN+ +KCL + Q +I E+ + I L+ D YGNYVIQ V S
Sbjct: 372 YEMSMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQRMLQVAS 431
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
Q ++I+ L + + L YGK +
Sbjct: 432 QPQKIQ--LKECIEKYWNTLSRSRYGKQI 458
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 625 NKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFG 684
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 685 NYVIQKFFEHGLPPQRRELADKLFDN---VLPLSLQMYGCRVIQKAIEV--------VDL 733
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ N + L+T GC
Sbjct: 734 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGC 793
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYV+Q++L P ++ +LA
Sbjct: 794 RVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELA 853
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 854 GKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQK 913
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 914 VLETCDDQQ-RELILGRIKVHLNALKKYTYGKHIVARV 950
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 173/342 (50%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 710 NKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFG 769
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QK G+ ++ E KL + +L + + G RV+QK ++ + +
Sbjct: 770 NYVVQKFFEHGLASQRRELANKLF-------EHVLTLSLQMYGCRVIQKAIEVVDLDQKI 822
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
++ QE ++ +++ +GNHVI++C++ P D ++ + + L+T
Sbjct: 823 KMVQELDGNIMRCVRD--------QNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTH 874
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + + D + A +L++ YGNYVVQ++L P + ++
Sbjct: 875 PYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAII 934
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNY 523
+LAG+ +S K +SNVV+KCL G + ++NE++ + + ++ D + NY
Sbjct: 935 KELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANY 994
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++A+V
Sbjct: 995 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARV 1035
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 165/332 (49%), Gaps = 20/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ RF+Q K++ N + E I E+ ++ +LM N++IQKL
Sbjct: 541 LKDIYNHVVEFSGDQHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVIQKL 600
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +L++ + G RV+QK D + +QQ+ LV
Sbjct: 601 FEHGNQAQKKALANQM---KGHVLQLSMQMYGCRVVQKAFD--------HVLTDQQASLV 649
Query: 360 SALKNIT---VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L + + K +GNHV+++ +++ P ++ + +++ L ++T + GC ++Q
Sbjct: 650 KELDGPNQQILKVVKDNNGNHVVQKAIERIPGEHIQFIVDAHRGQMLKMSTHQYGCRVVQ 709
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ + E K ++ +++ + L S+GNYVVQ+I+ P VV + A
Sbjct: 710 RMLEHCRPEAKRAILDELLEHTLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLA 769
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDV 531
S K +SN+V+K + + +Q + I++ + E + L+ D YGNYV+Q D
Sbjct: 770 FSKHKFASNIVEKSIEHADADQRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQKVHDQ 829
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
QG + L + + N P L+ YGK V+A
Sbjct: 830 LQGAEL-SALREDMKRNFPALRRTSYGKQVMA 860
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 30/324 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G +KD+ G RF+Q+++ + + D EMI +E+ + +LM N++IQK
Sbjct: 83 LKDILGHAYEFSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKY 142
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
NE Q+ K++ + L + + G RV+QK +D+ R Q+ E
Sbjct: 143 FEYGNETQI-KILFESMKGNFNFLSM--QMYGCRVVQKCMDSVSLDDRLQVVDE------ 193
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
LK ++L K +GNHVI++ ++ P T +LE + L+T GC ++Q +
Sbjct: 194 --LKPNILNLVKDQNGNHVIQKVIESIPTSRTPFILESLKHQIYHLSTHPYGCRVIQRLL 251
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ EE +A ++ ++ Y L + +GNYV+Q+I+ Q T ++ + LS
Sbjct: 252 EYSDEEDRAYILGELKGFIYYLVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSK 311
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGNYVIQTA 528
K +SN V+KC++ E + N ++ E + ++ DP+ NYV+Q
Sbjct: 312 HKFASNAVEKCIVHQSAENRRRVYNALLAKNENKDSPLDENSSLSIMMKDPFANYVVQKM 371
Query: 529 WDVSQG-------RRIRQTLYDLV 545
++ G +IRQ L DL+
Sbjct: 372 VELVDGPERALLVYKIRQYL-DLI 394
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAW 529
+ G + S + S +Q+ L ++ E I NEI + + L+ D +GNYVIQ +
Sbjct: 86 ILGHAYEFSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYS--IDLMTDVFGNYVIQKYF 143
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+ +I+ L++ + N FL MYG V+ K
Sbjct: 144 EYGNETQIK-ILFESMKGNFNFLSMQMYGCRVVQK 177
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 172/334 (51%), Gaps = 21/334 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 367 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 426
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 427 FEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VGLDQQTKMV 475
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 476 AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 535
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 536 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 595
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I+E++ H E+ ++ D + NYV+Q +
Sbjct: 596 QQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEV--MMKDQFANYVVQKVLETC 653
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
++ R+ + + + L+ + YGK+++A+V
Sbjct: 654 DDQQ-REAILTRIKAHLNTLKKYTYGKHIVARVE 686
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 354 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 413
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQ P ++ QL GR ALSL V+QK + G +Q T
Sbjct: 414 MTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTK 473
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR---QTLYDLVVDNSPFLQSHMYG 558
++ E+ H +++ + D GN+VIQ + I+ T Y VV L +H YG
Sbjct: 474 MVAELDGH--VMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVV----MLSTHPYG 527
Query: 559 KNVLAKV 565
V+ +V
Sbjct: 528 CRVIQRV 534
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 188/382 (49%), Gaps = 29/382 (7%)
Query: 194 SPSYSNLSHGFLSDHHHLGSSTN-----ASSRYNNFYARARHHHHRTSYSSIEELRGRII 248
S SNL+ G + H L + N ASS F + ++T + E+ G ++
Sbjct: 627 SSGMSNLAGGIMGPWH-LDAGCNIDESFASSLLEEFKS------NKTKCLELSEIAGHVV 679
Query: 249 LVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQM 308
+ D+ G RF+Q+K++ + M+ E++ LM N++IQK Q
Sbjct: 680 EFSADQYGSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVIQKFFEHGLPSQR 739
Query: 309 TKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVS 368
+L ++ +L + + G RV+QK ++ + E + +V L +
Sbjct: 740 RELAGKLLG---HVLTLSLQMYGCRVIQKAIEV--------VDLEHKIKMVEELDGHVMR 788
Query: 369 LSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ-K 427
+ +GNHVI++C++ P D + ++ + + L+T GC ++Q + ++ + +
Sbjct: 789 CVRDQNGNHVIQKCIECIPEDNIQFIVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKTQ 848
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++++ +++ +L++ YGNYVVQ++L + ++ +LAGR +S K +SNVV
Sbjct: 849 SKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVV 908
Query: 488 QKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
+KCL SG + ++NE++ + + ++ D + NYV+Q + ++ R+ +
Sbjct: 909 EKCLTFSGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQ-RELILT 967
Query: 544 LVVDNSPFLQSHMYGKNVLAKV 565
+ + L+ + YGK+++A+V
Sbjct: 968 RIKVHLTALKKYTYGKHIVARV 989
>gi|324503008|gb|ADY41314.1| Maternal protein pumilio [Ascaris suum]
Length = 736
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 190/410 (46%), Gaps = 40/410 (9%)
Query: 169 PRPNNLT-VQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRYNNFYAR 227
P+PN +T + N NR TTN ++ H+G + R N +
Sbjct: 329 PQPNAITQMPYNSNVHGNRRVTTN-------------MNARGHMGVDAD---RQNRSHLL 372
Query: 228 ARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELM 287
++R + + +L ++ A+D+ G RF+Q+K++ + + + + EV LM
Sbjct: 373 DDFRNNRNPHLQLSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLM 432
Query: 288 RHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
N++IQK EQ +L ++ + ++ + + G RV+QK L++ E +
Sbjct: 433 TDVFGNYVIQKFFEYGTPEQKNQLTSAI---KGNVMNLALQMYGCRVIQKALESIEPNQQ 489
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE-----NC 402
++ +E + ++ +K+ +GNHV+++ +++ P + +++ +
Sbjct: 490 MEILKEMEGQVLKCVKDQ--------NGNHVVQKVIERVDPSRLQFIIDAFVQPGDNLTV 541
Query: 403 LDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQV 462
+L+T GC ++Q + EEQK ++ + + L YGNYV+Q+++ +
Sbjct: 542 CNLSTHPYGCRVIQRVLEHCTEEQKRPVLDQLHMHIKTLVVDQYGNYVIQHVIEHGSMED 601
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLI 516
+V Q+ G + K +SNV++KCL +I E+ +P ++ ++
Sbjct: 602 RDRIVNQIKGDVLRFAQHKFASNVIEKCLTCGAPHHKNALITEVCGNPNDTTATPLLMMM 661
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
D + NYV+Q DV+ R+ + + + P L+ + YGK+++ K+
Sbjct: 662 KDQFANYVVQKMLDVADSAH-RKKMMLAIKPHIPALRKYNYGKHIITKLE 710
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
L +S L N V ++ HG+ I++ L++ + + EE+A + L TD G ++Q
Sbjct: 383 LQLSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVFGNYVIQ 442
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
EQK +L + + N L+ YG V+Q L P +++ ++ G+
Sbjct: 443 KFFEYGTPEQKNQLTSAIKGNVMNLALQMYGCRVIQKALESIEPNQQMEILKEMEGQVLK 502
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE---IVQLILDPYGNYVIQTAWDVSQ 533
+ ++VVQK + + II+ ++ + + L PYG VIQ +
Sbjct: 503 CVKDQNGNHVVQKVIERVDPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEHCT 562
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGN 568
+ R L L HM+ K ++ GN
Sbjct: 563 EEQKRPVLDQL----------HMHIKTLVVDQYGN 587
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 166/308 (53%), Gaps = 25/308 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + +KD+ G RF+Q++++ + + E+I +E+ + ELM N++IQK
Sbjct: 552 LKDIFGSAVEFSKDQHGSRFIQQQLEISSDEENEVIFNEIREASLELMTDVFGNYVIQKY 611
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY-PTRQQLTQEQQSLL 358
++ Q +++L + +Q + L + + G RV+QK + EY P Q++ +
Sbjct: 612 FEHGSDTQR-QVLLEQMKNQVQHLSM--QMYGCRVVQKAI---EYVPLNDQIS------I 659
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
++ LK+ VS K +GNHVI++ ++K P + + +L+ + L+T GC ++Q
Sbjct: 660 ITELKDSIVSCIKDQNGNHVIQKSIEKIPIEKIEFILDSLKTQIYHLSTHTYGCRVIQRL 719
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ ++ + + ++ ++ Y L + +GNYV+Q+I+ P +V + G S
Sbjct: 720 LEFSKPKDQEYILNELNKFTYFLIQDQFGNYVIQHIIEHGKPSERKLIVDTVLGSVVDFS 779
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNVV+KC++ +EQ + I++E++++ E + ++ D + NYV+Q
Sbjct: 780 KHKFASNVVEKCVIFGDDEQRSLILDEVLKNNEKDDDKPVDDRSPLGLMMKDQFANYVVQ 839
Query: 527 TAWDVSQG 534
DV++G
Sbjct: 840 KLVDVTKG 847
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 163/339 (48%), Gaps = 17/339 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GRI+ + D+ G RF+Q+K++ + ++ +EV+ LM
Sbjct: 486 NRARRVELSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAVVFAEVLPHASSLMTDVFG 545
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L + ++ + + G RV+QK L+ E
Sbjct: 546 NYVIQKFFEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMEL-------- 594
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 595 DQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 654
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A +L++ YGNYV Q+++ A ++++LA
Sbjct: 655 RVIQRVLEHCGGDSRGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLA 714
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI+ + ++ ++ D Y NYV+Q
Sbjct: 715 GQVVTMSQNKFASNVIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQK 774
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R+ L V + L+ + YGK++ ++V
Sbjct: 775 ILETCNDEQ-RELLVSRVKGHLQALRKYTYGKHIASRVE 812
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+E+ ++A+D+ G Q V++ + I+S++ + + +++ A+++I+K
Sbjct: 674 IDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKC 733
Query: 300 I---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+ + + + I+ LL + D + V+QK+L+ EQ+
Sbjct: 734 FQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILET--------CNDEQRE 785
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQ 384
LLVS +K +L K +G H+ R Q
Sbjct: 786 LLVSRVKGHLQALRKYTYGKHIASRVEQ 813
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 616 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFG 675
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L ++ + +L + + G RV+QK ++ +
Sbjct: 676 NYVIQKFFEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEV--------VDL 724
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 725 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 784
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 785 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 844
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 845 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 904
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 905 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARV 941
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H T +EE+ + ++A+D+ G +Q ++ P + +I+ E+ + ++ + +
Sbjct: 795 HDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 854
Query: 291 SANHLIQKLI---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
A+++++K + G E + +L + L + D + V+QK+L+
Sbjct: 855 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLET------ 908
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+Q+ L+++ +K +L K +G H++ R
Sbjct: 909 --CDDQQRELILTRIKVHLNALKKYTYGKHIVARV 941
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 175/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 617 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFG 676
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L ++ + +L + + G RV+QK ++ + + Q+ +
Sbjct: 677 NYVIQKFFEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIQMVK 733
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E ++ +++ +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 734 ELDGHVMRCVRD--------QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 785
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 786 RVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELA 845
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 846 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 905
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 906 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARV 942
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 620 NKTRGFELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFG 679
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 680 NYVIQKFFEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEV--------VDL 728
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 729 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 788
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 789 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 848
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 849 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 908
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+V+A++
Sbjct: 909 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHVVARI 945
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H T +EE+ + ++A+D+ G +Q ++ P + +I+ E+ + ++ + +
Sbjct: 799 HDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 858
Query: 291 SANHLIQKLI---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
A+++++K + G E + +L + L + D + V+QK+L+
Sbjct: 859 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLET------ 912
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+Q+ L+++ +K +L K +G HV+ R
Sbjct: 913 --CDDQQRELILTRIKVHLNALKKYTYGKHVVAR 944
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 13/304 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 21 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 80
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L + V + +L++ + G RV+QK L++ ++ EQQ +V
Sbjct: 81 FEFGTPEQKNTLGMQV---KGHVLQLALQMYGCRVIQKALES--------ISPEQQQEIV 129
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 130 HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 189
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L + + ++ + G+ LS
Sbjct: 190 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQ 249
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQGRRI 537
K +SNVV+KC+ + + TG+I+E+ + + ++ D Y NYV+Q DVS+ ++
Sbjct: 250 HKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQL 309
Query: 538 RQTL 541
++ +
Sbjct: 310 KKLM 313
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 96/246 (39%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 24 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 83
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ ++V +L G +
Sbjct: 84 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQ 143
Query: 482 CSSNVVQKC-----------------------------------LLE-SGEEQSTGIINE 505
++VVQKC +LE EQ+T I++E
Sbjct: 144 NGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDE 203
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ H E QLI D YGNYVIQ + + + + L + V L H + NV+ K
Sbjct: 204 LHEHTE--QLIQDQYGNYVIQHVLEHGK-QEDKSILINSVRGKVLVLSQHKFASNVVEKC 260
Query: 566 RGNKNR 571
+ R
Sbjct: 261 VTHATR 266
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 162/339 (47%), Gaps = 17/339 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GRI+ + D+ G RF+Q+K++ + + +EV+ LM
Sbjct: 506 NRARRVELSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFG 565
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L + ++ + + G RV+QK L+ E
Sbjct: 566 NYVIQKFFEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMEL-------- 614
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 615 DQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 674
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A +L++ YGNYV Q+++ A ++++LA
Sbjct: 675 RVIQRVLEHCGGDSRGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLA 734
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI+ + ++ ++ D Y NYV+Q
Sbjct: 735 GQVVTMSQNKFASNVIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQK 794
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
+ + R+ L V + L+ + YGK++ ++V
Sbjct: 795 ILETCNDEQ-RELLVSRVKGHLQALRKYTYGKHIASRVE 832
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+E+ ++A+D+ G Q V++ + I+S++ + + +++ A+++I+K
Sbjct: 694 IDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKC 753
Query: 300 I---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+ + + + I+ LL + D + V+QK+L+ EQ+
Sbjct: 754 FQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILET--------CNDEQRE 805
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQ 384
LLVS +K +L K +G H+ R Q
Sbjct: 806 LLVSRVKGHLQALRKYTYGKHIASRVEQ 833
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 174/361 (48%), Gaps = 28/361 (7%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI 270
S ++ + F+ + +S E L I ++KD++G RF+QKK+D
Sbjct: 115 FSSGSSEEPQKEQFFEEVLAFAKKRGITSSENL---ICAISKDQEGSRFIQKKLDSATIE 171
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
+I++ E+ + EL+ N+++QK + + EQ K+ ++ S+ ++ + +
Sbjct: 172 EIDITFEEICPWISELIVDLFGNYVVQKFLEIGTTEQREKIFFAMEST---IISLALHMY 228
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
G RV+QK L+ + + +V +K + L +GNHV+++C++ D+
Sbjct: 229 GCRVIQKALECKDINRK----------IVEKIKGHVIDLVCDQNGNHVVQKCVECVDSDF 278
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
+++E E+ + L+ R GC ++Q + A I +++NA +L E YGNYV
Sbjct: 279 ---VIKEFEEDAVSLSRHRYGCRVIQR--IFENSTKCASAIDKIISNAKLLVEDQYGNYV 333
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI---- 506
+Q+IL ++ +L+ S+ K +SNV++KC++ E ++ ++
Sbjct: 334 IQHILEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVICGTSEDRRYMLKQLKSAV 393
Query: 507 --IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+V + +D +GNYV+Q DV G ++ L + N L+ Y K +++K
Sbjct: 394 GPAGEDLLVHITMDKFGNYVVQRLLDVLTGAD-KEVLMSHLRANIADLKKSSYAKCIISK 452
Query: 565 V 565
+
Sbjct: 453 L 453
>gi|380488307|emb|CCF37468.1| hypothetical protein CH063_08789 [Colletotrichum higginsianum]
Length = 821
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 151/292 (51%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ + D+ G RF+Q+K++ N + + + E+ + +LM+ N++IQK
Sbjct: 430 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 489
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K++ S + +++ + + RV+QK L+ + EQQ+ LV
Sbjct: 490 FEHGNQVQ-KKVLASQMKG--KVVDLSMQMYACRVVQKALE--------HVLVEQQAELV 538
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + + K +GNHV+++ ++ P Y +++ LA C ++Q +
Sbjct: 539 KELEPEILKVVKDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRML 598
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E+ K ++A++ ++ VL YGNYVVQ+I+ + + ++ + + LS
Sbjct: 599 EYGTEQDKETILAELHSSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTLSK 658
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHP----EIVQLIL-DPYGNYVIQ 526
K +SNVV+KC+ E+ GI +II H +QL++ D YGNYVIQ
Sbjct: 659 HKFASNVVEKCIQYGTAEERKGIREQIISHAADGTSSLQLMMKDQYGNYVIQ 710
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 162/338 (47%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GRI+ + D+ G RF+Q+K++ + + +EV+ LM
Sbjct: 265 NRARRVELSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFG 324
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L + ++ + + G RV+QK L+ E
Sbjct: 325 NYVIQKFFEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMEL-------- 373
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 374 DQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 433
Query: 413 CLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + I D ++ +A +L++ YGNYV Q+++ A ++++LA
Sbjct: 434 RVIQRVLEHCGGDSRGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLA 493
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI+ + ++ ++ D Y NYV+Q
Sbjct: 494 GQVVTMSQNKFASNVIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQK 553
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L V + L+ + YGK++ ++V
Sbjct: 554 ILETCNDEQ-RELLVSRVKGHLQALRKYTYGKHIASRV 590
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+E+ ++A+D+ G Q V++ + I+S++ + + +++ A+++I+K
Sbjct: 453 IDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKC 512
Query: 300 I---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+ + + + I+ LL + D + V+QK+L+ EQ+
Sbjct: 513 FQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILET--------CNDEQRE 564
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQ 384
LLVS +K +L K +G H+ R Q
Sbjct: 565 LLVSRVKGHLQALRKYTYGKHIASRVEQ 592
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 17/334 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ G I+ + D+ G RF+Q+K++ + + SEV+ LM
Sbjct: 1461 NRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFG 1520
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 1521 NYVIQKFFEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 1569
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 1570 DQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGC 1629
Query: 413 CLLQYCIP-LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + Q +I +++ +A VL++ YGNYV Q++L ++++LA
Sbjct: 1630 RVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLA 1689
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I EI++ E ++ ++ D Y NYV+Q
Sbjct: 1690 GQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQK 1749
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
+ ++ R+ L V + L+ + YGK++
Sbjct: 1750 ILETCNEQQ-RELLLSRVKGHLQALRKYTYGKHI 1782
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+S + V S HG+ I++ L+ + + E+ + L TD G ++Q
Sbjct: 1468 LSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKF 1527
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
EQ+ L +V + LS YG V+Q L + ++V +L G
Sbjct: 1528 FEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCV 1587
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ ++V+QKC+ E + G + R ++ L + PYG VIQ + G
Sbjct: 1588 RDQNGNHVIQKCI-ECVPTEHIGFVVSAFRG-QVASLSMHPYGCRVIQRVLEHCGGDSQG 1645
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRV 576
Q + D +++++ L YG V V + R H R
Sbjct: 1646 QCIIDEILESACVLAQDQYGNYVTQHVL-ERGRGHERT 1682
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 167/338 (49%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 688 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFG 747
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QK Q +L ++ +L + + G RV+QK ++ + + ++ Q
Sbjct: 748 NYVVQKFFEHGLASQKRELANKLLG---HVLALSLQMYGCRVIQKAIEVVDLDQKIEMVQ 804
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E L + + +GNHVI++C++ P D ++ + + L+T GC
Sbjct: 805 E--------LDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGC 856
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + ++ + + D + A +L++ YGNYVVQ++L P + ++ +LA
Sbjct: 857 RVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELA 916
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G + ++ E++ + + ++ D + NYV+Q
Sbjct: 917 GKIVQMSQQKFASNVVEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQK 976
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ LY + V + L+ + YGK+++A+V
Sbjct: 977 VLETCDDQQRELILYRIKVHLNA-LKKYTYGKHIVARV 1013
>gi|336263338|ref|XP_003346449.1| hypothetical protein SMAC_05344 [Sordaria macrospora k-hell]
gi|380089961|emb|CCC12272.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 856
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 30/304 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+++++G I A D G RF+Q+K+ + + + E+ D+L LM N+++QK
Sbjct: 413 LKQIQGSIADFAADRTGSRFIQEKLQSASSEEKTFVFQELYDELIPLMTDVYGNYVVQKF 472
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ TK+ L + + +LR+ ++ G RV+QK LD + + LV
Sbjct: 473 FEHGTQEQKTKMALVI---KDNMLRLSENKYGCRVVQKALD--------NIFSNYKVELV 521
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--AENCLDLATDRSGCCLLQY 417
S L+ L+KS GNHVI+ ++ P + + + ++LA ++ C ++Q
Sbjct: 522 SELRGHIDKLNKSQEGNHVIQMIIKLLPRENIGFIYDSFRGPGKVMELALNQYACRVIQR 581
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ EE + L++++ A+ L +YGNYV Q+I+ + A ++A + + AL
Sbjct: 582 TLEHGNEEDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKSEDRARMIATVMSQAVAL 641
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----------------IVQLILDPYG 521
S K +SNVV+KC ++ G + I ++ +P+ + L+LD +
Sbjct: 642 STHKHASNVVEKC-IKYGTPEDVRRIRDMFFNPQDGVGGYSSEQQSPDSFLRYLMLDHFA 700
Query: 522 NYVI 525
NYVI
Sbjct: 701 NYVI 704
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 15/249 (6%)
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
Q + D +GSR +Q+ L Q + E+++ + L + + L +GN+V
Sbjct: 417 QGSIADFAADRTGSRFIQEKL--------QSASSEEKTFVFQELYDELIPLMTDVYGNYV 468
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA 438
+++ + + + I +N L L+ ++ GC ++Q + K L++++ +
Sbjct: 469 VQKFFEHGTQEQKTKMALVIKDNMLRLSENKYGCRVVQKALDNIFSNYKVELVSELRGHI 528
Query: 439 YVLSEHSYGNYVVQYILGLKIPQVTADVV---AQLAGRYFALSLGKCSSNVVQKCLLESG 495
L++ GN+V+Q I+ L +P+ + + G+ L+L + + V+Q+ L
Sbjct: 529 DKLNKSQEGNHVIQMIIKL-LPRENIGFIYDSFRGPGKVMELALNQYACRVIQRTLEHGN 587
Query: 496 EEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSH 555
EE +++E+ H LI D YGNYV Q + + R + V+ + L +H
Sbjct: 588 EEDRLYLVSEL--HKGAHTLITDAYGNYVAQHIIEAGKSED-RARMIATVMSQAVALSTH 644
Query: 556 MYGKNVLAK 564
+ NV+ K
Sbjct: 645 KHASNVVEK 653
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+ Q+ G + + S +Q+ L + E+ T + E+ + E++ L+ D YGNYV+Q
Sbjct: 413 LKQIQGSIADFAADRTGSRFIQEKLQSASSEEKTFVFQEL--YDELIPLMTDVYGNYVVQ 470
Query: 527 TAWDVSQGRRIRQTLYDLVV-DNSPFLQSHMYGKNVLAKVRGN 568
++ G + ++T LV+ DN L + YG V+ K N
Sbjct: 471 KFFE--HGTQEQKTKMALVIKDNMLRLSENKYGCRVVQKALDN 511
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 613 NKTRGFELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPHALALMTDVFG 672
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + + +L + + G RV+QK ++ +
Sbjct: 673 NYVIQKFFEHGLPPQRRELGDKLF---ENVLPLSLQMYGCRVIQKAIEV--------VDL 721
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 722 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVSLSTHPYGC 781
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 782 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 841
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 842 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 901
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+V+A++
Sbjct: 902 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHVVARI 938
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 42/333 (12%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDER--NPIDIEMILSEVIDDLHELMRHQSANHLI 296
S E LRG + AKD+ GCR LQ+ + + N +I++E++ + ELM Q AN L+
Sbjct: 191 SAECLRGAVYETAKDQHGCRHLQRLLGDSDGNSEVARVIMNEIVPHVAELMTDQYANFLV 250
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL ++ + K+ + ++ I G+ +QK+++ T+E+
Sbjct: 251 QKLFDIMPPDVRYKV---AYVAAPKIADIALTPHGTFSVQKMIETIS-------TREEME 300
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
++ AL V L K +GNH I++ LQ+F + + + + +C+ +A ++ GCC+LQ
Sbjct: 301 IIREALSRDVVRLVKDANGNHAIQKVLQRFDHEDKEFIYAAVGADCVPIAKNKQGCCVLQ 360
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
C+ A Q++ L+ ++ ++E YGNYV+QY+L T D +A +
Sbjct: 361 RCLEYASPTQRSTLVKHILDCCLQIAEDPYGNYVLQYVLQSG-NNTTIDTIAIAFLPHLP 419
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-VQLILDPYGNYVIQTAWDVS--- 532
L V++ +E+ + PE+ +LI D +GNYV+QTA S
Sbjct: 420 L---------VREMYVET------------MCTPEVAARLIQDDFGNYVLQTALTRSTPA 458
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q + L L+ P ++S Y K + AK+
Sbjct: 459 QAEALVAVLRPLM----PTIRSTPYAKKLEAKI 487
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 175/380 (46%), Gaps = 54/380 (14%)
Query: 221 YNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI 280
+ N AR +H H + ELR ++ A+D+ G RF+Q+K++ + + +E++
Sbjct: 1031 FRNSSARFQHMH-------LSELRDHMVEFARDQHGSRFIQQKLETATTAEKNSVFNEIL 1083
Query: 281 DDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD 340
+LM N++IQK +EQ L + Q ++ + G RV+QK L+
Sbjct: 1084 PHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQRL---QGHVVEFATQMYGCRVIQKALE 1140
Query: 341 AGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE 400
+ + E + +V L+ K +GNHVI++C++ PP ++
Sbjct: 1141 S--------VPAEAKIHIVGELRPFVTRCVKDQNGNHVIQKCIECVPPSELDFIISAFRG 1192
Query: 401 NCLDLATDRSGCCLLQ----YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ L++ GC ++Q +C+P EQ ++ ++ L + YGNYV+Q++L
Sbjct: 1193 QVVLLSSHPYGCRVIQRILEHCLP----EQTRPILDELHKGVEHLVKDQYGNYVIQHVLE 1248
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP------ 510
+ + ++ L GR ALS K +SNV++K + + + +I EI+ HP
Sbjct: 1249 HGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIANAVPSERAVLIEEIL-HPISNVNI 1307
Query: 511 --------------EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+V ++ D Y NYV+Q +++ + R+ L + + L+
Sbjct: 1308 NGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLELADTEQ-RRVLINRIRPMQNVLRKFN 1366
Query: 557 YGKNVLAK------VRGNKN 570
YGK+++AK V GN N
Sbjct: 1367 YGKHIIAKLEKYNNVAGNNN 1386
>gi|336469407|gb|EGO57569.1| hypothetical protein NEUTE1DRAFT_121965 [Neurospora tetrasperma
FGSC 2508]
gi|350290954|gb|EGZ72168.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 824
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 30/305 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I A D G RF+Q K+ + + + E++++L LM N+++QK
Sbjct: 381 LKQIYGSIADFAADRAGSRFIQDKLQSASSEEKAEVWRELMEELMPLMTDVYGNYVVQKF 440
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ T + S++ ++ +LR+ ++ G RV+QK LD + + Q LV
Sbjct: 441 FEHGTQEQKTSMA-SII--KKNMLRLSENKYGCRVVQKALD--------NIFRRYQVELV 489
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--AENCLDLATDRSGCCLLQY 417
+ LK+ L+KS GNHVI+ ++ P D + + ++LA ++ C ++Q
Sbjct: 490 NELKDHVDKLNKSQEGNHVIQMIIKLLPRDEIGFIYDSFRGPGKVMELALNQYACRVIQR 549
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ EE + L++++ A+ L +YGNYV Q+I+ P+ A ++A + + L
Sbjct: 550 ALEHGNEEDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKPEDRARMIAAVMSQTITL 609
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----------------IVQLILDPYG 521
S K +SNVV+KC + G + I ++ P+ + L+LD +
Sbjct: 610 STHKHASNVVEKC-INYGTPEDVRRIRDMFFSPQDGVGGYSSDHQSPDSFLRFLMLDHFA 668
Query: 522 NYVIQ 526
NYVIQ
Sbjct: 669 NYVIQ 673
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 621 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFG 680
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L + +L + + G RV+QK ++ +
Sbjct: 681 NYVIQKFFEHGLPPQRRELAEKLFD---HVLPLSLQMYGCRVIQKAIEV--------VDL 729
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 730 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 789
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 790 RVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 849
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 850 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 909
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+V+A++
Sbjct: 910 VLETCDDQQ-RELILTRIKVHLTALKKYTYGKHVVARI 946
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H T +EE+ + ++A+D+ G +Q ++ P + +I+ E+ + ++ + +
Sbjct: 800 HDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 859
Query: 291 SANHLIQKLI---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
A+++++K + G E + +L + L + D + V+QK+L+
Sbjct: 860 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLET------ 913
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+Q+ L+++ +K +L K +G HV+ R
Sbjct: 914 --CDDQQRELILTRIKVHLTALKKYTYGKHVVAR 945
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 173/338 (51%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 626 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFG 685
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK Q +L ++ + +L + + G RV+QK ++ +
Sbjct: 686 NYVIQKFFEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEV--------VDL 734
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ +V L + + +GNHV+++C++ P + + ++ + + L+T GC
Sbjct: 735 DQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGC 794
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ +++ +L++ YGNYVVQ++L P ++ +LA
Sbjct: 795 RVIQRVLEHCHDPDTQSKVMEEILITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELA 854
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 855 GKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 914
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 915 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARV 951
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H T +EE+ + ++A+D+ G +Q ++ P + +I+ E+ + ++ + +
Sbjct: 805 HDPDTQSKVMEEILITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 864
Query: 291 SANHLIQKLI---GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTR 347
A+++++K + G E + +L + L + D + V+QK+L+
Sbjct: 865 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLET------ 918
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+Q+ L+++ +K +L K +G H++ R
Sbjct: 919 --CDDQQRELILTRIKVHLNALKKYTYGKHIVARV 951
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 173/374 (46%), Gaps = 48/374 (12%)
Query: 221 YNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI 280
+ N AR +H H + ELR ++ A+D+ G RF+Q+K++ + + +E++
Sbjct: 924 FRNSSARFQHMH-------LSELRDHMVEFARDQHGSRFIQQKLETATTAEKNSVFNEIL 976
Query: 281 DDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLD 340
+LM N++IQK +EQ L + Q ++ + G RV+QK L+
Sbjct: 977 PHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQRL---QGHVVEFATQMYGCRVIQKALE 1033
Query: 341 AGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE 400
+ + E + +V L+ K +GNHVI++C++ PP ++
Sbjct: 1034 S--------VPAEAKIHIVGELRPFVTRCVKDQNGNHVIQKCIECVPPSELDFIISAFRG 1085
Query: 401 NCLDLATDRSGCCLLQ----YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
+ L++ GC ++Q +C+P EQ ++ ++ L + YGNYV+Q++L
Sbjct: 1086 QVVLLSSHPYGCRVIQRILEHCLP----EQTRPILDELHKGVEHLVKDQYGNYVIQHVLE 1141
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP------ 510
+ + ++ L GR ALS K +SNV++K + + + +I EI+ HP
Sbjct: 1142 HGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIANAVPSERAVLIEEIL-HPISNVNI 1200
Query: 511 --------------EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
+V ++ D Y NYV+Q +++ + R+ L + + L+
Sbjct: 1201 NGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLELADTEQ-RRVLINRIRPMQNVLRKFN 1259
Query: 557 YGKNVLAKVRGNKN 570
YGK+++AK+ N
Sbjct: 1260 YGKHIIAKLEKYNN 1273
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 171/333 (51%), Gaps = 21/333 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 523 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 582
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 583 FEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VGLDQQTKMV 631
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 632 AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 691
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 692 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 751
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I E++ H E+ ++ D + NYV+Q +
Sbjct: 752 QQKFASNVIEKCLAFGNPVERQILIGEMLGSTNESEHLEV--MMKDQFANYVVQKVLETC 809
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 810 DDQQ-REAILTRIKAHLNTLKKYTYGKHIVARV 841
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 510 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 569
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQ P ++ QL GR ALSL V+QK + G +Q T
Sbjct: 570 MTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTK 629
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR---QTLYDLVVDNSPFLQSHMYG 558
++ E+ H +++ + D GN+VIQ + I+ T Y VV L +H YG
Sbjct: 630 MVAELDGH--VMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVV----MLSTHPYG 683
Query: 559 KNVLAKV 565
V+ +V
Sbjct: 684 CRVIQRV 690
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 179/380 (47%), Gaps = 36/380 (9%)
Query: 215 TNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM 274
TN S+ F R+ + R ++ +LR ++ A+D+ G RF+Q+K++ + ++
Sbjct: 1078 TNRSALLEEF----RNSNGRFQQVTLSQLRDHMVEFARDQHGSRFIQQKLETASTVEKNA 1133
Query: 275 ILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRV 334
+ +E++ +LM N++IQK +EQ L + Q ++ + G RV
Sbjct: 1134 VFAEILPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQRL---QGHVVEFATQMYGCRV 1190
Query: 335 MQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
+QK L++ + + + +VS L+ K +GNHVI++C++ P +
Sbjct: 1191 IQKALES--------VPPDTKIRIVSELRPYVTRCVKDQNGNHVIQKCIECVQPSELDFI 1242
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+ + L++ GC ++Q + EQ ++ ++ L + YGNYV+Q++
Sbjct: 1243 IAAFRGQVVSLSSHPYGCRVIQRILEHCLAEQTRPILEELHEGVDHLVKDQYGNYVIQHV 1302
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP---- 510
L +P + ++ L GR LS K +SNV++K + + + +I+EI+ P
Sbjct: 1303 LEHGLPGDKSRIIQSLRGRVSTLSAHKFASNVMEKAIANAQPSERAILIDEILHPPTCLN 1362
Query: 511 --------------EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
++ ++ D Y NYV+Q ++++ + R++L + L+
Sbjct: 1363 LSGESVTTPSSSNSSLIDMMKDQYANYVVQRMLELAEMDQ-RRSLISRIQPIQNLLRKFN 1421
Query: 557 YGKNVLAKVRGNKNRFHNRV 576
YGK+++AK+ K + H R
Sbjct: 1422 YGKHIIAKLE--KYKVHPRT 1439
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 172/333 (51%), Gaps = 21/333 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 512 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 571
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 572 FEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VGLDQQTKMV 620
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 621 AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 680
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 681 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 740
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I+E++ H E+ ++ D + NYV+Q +
Sbjct: 741 QQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEV--MMKDQFANYVVQKVLETC 798
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 799 DDQQ-REAILTRIKAHLNTLKKYTYGKHIVARV 830
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 499 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 558
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQ P ++ QL GR ALSL V+QK + G +Q T
Sbjct: 559 MTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTK 618
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR---QTLYDLVVDNSPFLQSHMYG 558
++ E+ H +++ + D GN+VIQ + I+ T Y VV L +H YG
Sbjct: 619 MVAELDGH--VMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVV----MLSTHPYG 672
Query: 559 KNVLAKV 565
V+ +V
Sbjct: 673 CRVIQRV 679
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 170/329 (51%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
E+ G ++ + D+ G RF+Q+K++ + + +M+ +E++ LM N+++QK
Sbjct: 548 EIAGHVVEFSADQYGSRFIQQKLETASVEEKDMVFTEIMPQALTLMTDVFGNYVVQKFFE 607
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V+
Sbjct: 608 HGSTAQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLDQQTKMVAE 656
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + + +GNHVI++C++ P + + ++ + L+T GC ++Q +
Sbjct: 657 LDGHVMRCVRDQNGNHVIQKCIECIPQNIIEFIVSTFYGQVVVLSTHPYGCRVIQRVLEH 716
Query: 422 AQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ + +++ D V+ + +L+ YGNYVVQ+++ P + ++ +L G+ +S
Sbjct: 717 CDDPKTQQIMMDEVLQSVCLLATDQYGNYVVQHVMEHGKPHERSAIIEKLIGQIVQMSQQ 776
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRR 536
K +SNV++KCL + +I E++ E + ++ D + NYV+Q + ++
Sbjct: 777 KFASNVIEKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQKVLETCDDQQ 836
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ + + + L+ + YGK+++A+V
Sbjct: 837 -REAILTRIKAHLNTLKKYTYGKHIVARV 864
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 119/243 (48%), Gaps = 18/243 (7%)
Query: 221 YNNFYARARHHHHRTSYSS--IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSE 278
+ N+ + H T+ ++L GR++ ++ GCR +QK ++ + +++E
Sbjct: 597 FGNYVVQKFFEHGSTAQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVDLDQQTKMVAE 656
Query: 279 VIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKL 338
+ + +R Q+ NH+IQK I + + + + I+S Q ++ + G RV+Q++
Sbjct: 657 LDGHVMRCVRDQNGNHVIQKCIECI-PQNIIEFIVSTFYGQ--VVVLSTHPYGCRVIQRV 713
Query: 339 LDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
L+ + P QQ+ ++ L+++ + L+ +GN+V++ ++ P ++E++
Sbjct: 714 LEHCDDPKTQQIMMDE------VLQSVCL-LATDQYGNYVVQHVMEHGKPHERSAIIEKL 766
Query: 399 AENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANA------YVLSEHSYGNYVVQ 452
+ ++ + +++ C+ ++ LI +++ + V+ + + NYVVQ
Sbjct: 767 IGQIVQMSQQKFASNVIEKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQ 826
Query: 453 YIL 455
+L
Sbjct: 827 KVL 829
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 172/333 (51%), Gaps = 21/333 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 539 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 598
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 599 FEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VGLDQQTKMV 647
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 648 AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 707
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 708 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 767
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I+E++ H E+ ++ D + NYV+Q +
Sbjct: 768 QQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEV--MMKDQFANYVVQKVLETC 825
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 826 DDQQ-REAILTRIKAHLNTLKKYTYGKHIVARV 857
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 526 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 585
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQ P ++ QL GR ALSL V+QK + G +Q T
Sbjct: 586 MTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTK 645
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR---QTLYDLVVDNSPFLQSHMYG 558
++ E+ H +++ + D GN+VIQ + I+ T Y VV L +H YG
Sbjct: 646 MVAELDGH--VMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVV----MLSTHPYG 699
Query: 559 KNVLAKV 565
V+ +V
Sbjct: 700 CRVIQRV 706
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 173/380 (45%), Gaps = 34/380 (8%)
Query: 163 IDGLGLPRPN-NLTVQRNLVAATNRYATTNNASPSYSNLSHGFLSDHHHLGSSTNASSRY 221
I G+ P P + T +L T + TT P L+H LSD H+ + ++ +
Sbjct: 250 IFGMQSPVPTRSATCSVDLSQTTPQRITTMRPCPLSFTLTHSALSDTHN-----STTTVF 304
Query: 222 NNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDE-----RNPIDIEMIL 276
+N + Y +++L K+ GC+ LQ+ + + R +D+ +
Sbjct: 305 SNEPIAPQPDLPTNDYER------KLVLSFKEPTGCKILQQYLADFPDKSRYLLDVFIAE 358
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
+ L+ H S N+ QK+I + Q +++L + Q L IC +L G+R +Q
Sbjct: 359 YSTPSLMESLLIHPSGNYCFQKIIESSDASQRLRILLLI---QDSLFDICQNLHGTRSIQ 415
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALK--NITVSLSKSPHGNHVIKRCLQKFPPDYTKDL 394
KL + + + E+++++ L + + L +GNH ++RC++ F P +
Sbjct: 416 KLFE-------RVSSDEEKAIIAQQLGAGDRIIKLIVDINGNHCVQRCIETFAPKDCTFI 468
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
++I + + T + GCC++Q C+ L E Q+ +++ + + L +GNYV QY
Sbjct: 469 YDQIIRELVLVGTHQHGCCIIQRCLDLCSEAQRVQIVTAIKNHVMELIVDRFGNYVFQYS 528
Query: 455 L-----GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
L GL D++ + G +L K SS+ V+KCL T I ++
Sbjct: 529 LEKANNGLCGLISADDLIRPILGHEGSLVNQKFSSHAVEKCLKYGSRRMRTLITENLMAS 588
Query: 510 PEIVQLILDPYGNYVIQTAW 529
+ +D +GNYV+Q A+
Sbjct: 589 SSFLSSAMDKFGNYVVQKAF 608
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 172/333 (51%), Gaps = 21/333 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 543 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 602
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 603 FEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VGLDQQTKMV 651
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 652 AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 711
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 712 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 771
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I+E++ H E+ ++ D + NYV+Q +
Sbjct: 772 QQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEV--MMKDQFANYVVQKVLETC 829
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 830 DDQQ-REAILTRIKAHLNTLKKYTYGKHIVARV 861
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 530 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 589
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQ P ++ QL GR ALSL V+QK + G +Q T
Sbjct: 590 MTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTK 649
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR---QTLYDLVVDNSPFLQSHMYG 558
++ E+ H +++ + D GN+VIQ + I+ T Y VV L +H YG
Sbjct: 650 MVAELDGH--VMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVV----MLSTHPYG 703
Query: 559 KNVLAKV 565
V+ +V
Sbjct: 704 CRVIQRV 710
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 171/333 (51%), Gaps = 21/333 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ +E++ LM N+++QK
Sbjct: 557 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQALTLMTDVFGNYVVQKF 616
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + +QQ+ +V
Sbjct: 617 FEHGSSAQIKELADQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLDQQTKMV 665
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 666 AELDGQVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVL 725
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L+ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 726 EHCDDPKTQQIMMDEILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 785
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII------RHPEIVQLILDPYGNYVIQTAWDVS 532
K +SNV++KCL + +I E++ H E+ ++ D + NYV+Q +
Sbjct: 786 QQKFASNVIEKCLAFGNPVERQVLIGEMLGSSNESEHLEV--MMKDQFANYVVQKVLETC 843
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 844 DDQQ-REMILTRIKAHLNTLKKYTYGKHIVARV 875
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 377 HVIKRCLQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVV 435
+++ L++F + +K L EIA + ++ + D+ G +Q + A E+K + A+++
Sbjct: 538 NLVPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIM 597
Query: 436 ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG--------------- 480
A L +GNYVVQ ++ QL GR ALSL
Sbjct: 598 PQALTLMTDVFGNYVVQKFFEHGSSAQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVD 657
Query: 481 ----------------KC-----SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDP 519
+C ++V+QKC+ + I++ + ++V L P
Sbjct: 658 LDQQTKMVAELDGQVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTF--YGQVVMLSTHP 715
Query: 520 YGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
YG VIQ + + +Q + D ++ + L + YG V+ V
Sbjct: 716 YGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLATDQYGNYVVQHV 761
>gi|392566810|gb|EIW59985.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 378
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 158/314 (50%), Gaps = 21/314 (6%)
Query: 228 ARHHHHRTSYSSIEELR---GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
A+ R + S ELR G I+ + D+ G RF+Q+K++ ++E+I E++
Sbjct: 4 AQLDEFRANKSRKWELRDIFGYIVEFSGDQHGSRFIQQKLESATSEEMEIIFDEIVPQYA 63
Query: 285 -ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
+LM+ N+++QK+ Q +L V + + ++L + + G RV+QK ++
Sbjct: 64 IQLMQDVFGNYVVQKMFEYGTSAQKARL---VATMEGQILGLSLQMYGCRVVQKAIE--- 117
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
+ EQQ L V L + K +GNHVI++ ++ PD + +
Sbjct: 118 -----HILPEQQVLFVQELGPNVLRCVKDANGNHVIQKLIEHVAPDRLA-FVTAFRGSVY 171
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
DL+T GC +LQ C E+Q L+ ++ L +GNYVVQ++L PQ
Sbjct: 172 DLSTHPYGCRVLQRCFEYMPEDQTRPLLDELHKYVPNLMIDQFGNYVVQFVLEHGRPQDR 231
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILD 518
A ++++L G+ + ++ K +SNV +K L+ + E +I+EI+ + I+ L+ D
Sbjct: 232 AMIISKLTGQMYNMAKHKFASNVCEKALVCADPESRRQLIDEIMTPKQDGLSPIMGLMKD 291
Query: 519 PYGNYVIQTAWDVS 532
+GNYV+Q A V+
Sbjct: 292 SFGNYVLQRALTVA 305
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 190/388 (48%), Gaps = 26/388 (6%)
Query: 186 RYATTNNASPSYSNLSHGFLSDHHHLGSSTN---ASSRYNNFYARARHHHHRTSYSSIEE 242
R N PS + G + H+ +S + SS F + ++T + E
Sbjct: 112 RRGEVNMRYPSATRNYSGGVMGSWHMDASLDEGFGSSMLEEFKS------NKTRGFELSE 165
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
+ G ++ + D+ G RF+Q+K++ + M+ E++ LM N++IQK
Sbjct: 166 IAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEH 225
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
Q +L ++ + +L + + G RV+QK ++ + +Q+ +V L
Sbjct: 226 GLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEV--------VDLDQKIKMVKEL 274
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
+ + +GNHV+++C++ P + + ++ + + L+T GC ++Q +
Sbjct: 275 DGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHC 334
Query: 423 QE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
+ + +++++ ++++ +L++ YGNYVVQ++L P ++ +LAG+ +S K
Sbjct: 335 HDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 394
Query: 482 CSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRI 537
+SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q + ++
Sbjct: 395 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQ- 453
Query: 538 RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ + + + L+ + YGK+++A+V
Sbjct: 454 RELILTRIKVHLNALKKYTYGKHIVARV 481
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ D+ G RF+Q K++ N + E + E+ + +LM N++IQKL
Sbjct: 512 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 571
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + Q + + G R +QK L+ + EQQ+ +V
Sbjct: 572 FEHGNQAQKRLLAQQM---QGHIYSLSVQTYGCRTVQKALE--------HVLVEQQATMV 620
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + + +GNHVI++ +++ P ++ + +++E AT GC ++Q +
Sbjct: 621 KELEDSVMKCVTNQNGNHVIQKAIERVPNEHIRFIIDEFRGQIPRYATHTYGCRVIQRML 680
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ ++A++ A L YGNYV+Q+I+ +++ + G+ S
Sbjct: 681 EHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSK 740
Query: 480 GKCSSNVVQKCLLESGEEQSTGI------INEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K + EQ GI +NE P ++ L+ D YGNYVIQ + V +
Sbjct: 741 HKFASNVVEKSITFGTLEQRLGITRILSAVNEKGEGP-LLGLMRDQYGNYVIQKSLSVLE 799
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
G + L ++ P L+ YGK + A + G+ +++
Sbjct: 800 GSDYKM-LVSRIMPLMPLLKKCSYGKQI-AGIEGHLHKY 836
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 170/331 (51%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 573 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 632
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + QQ+ +V
Sbjct: 633 FEHGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLAQQTKMV 681
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P D + ++ + L+T GC ++Q +
Sbjct: 682 GELDGHIMRCVRDQNGNHVIQKCIECIPQDIIQFIVSTFYGQVVLLSTHPYGCRVIQRVL 741
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ +++ D ++ + +L++ YGNYVVQ++L P ++ +L G+ +S
Sbjct: 742 EHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQMS 801
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL + +I E++ E +++++ D + NYV+Q +
Sbjct: 802 QQKFASNVIEKCLAFGNPVERQILIGEMLESTTESEPLEVMMKDQFANYVVQKVLETCDD 861
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 862 QQ-REMILTRIKAHLNTLKKYTYGKHIVARV 891
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 173/355 (48%), Gaps = 36/355 (10%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
+++T + ++ ++ + D+ G RF+Q+K++ + + I E++ LM
Sbjct: 632 NNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVF 691
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK + Q +L + +L + + G RV+QK L+ +
Sbjct: 692 GNYVIQKFFEHGTDSQRKELANQLTG---HVLPLSLQMYGCRVIQKALEV--------VD 740
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+QQS +VS L + + +GNHVI++C++ P + + ++ + L+T G
Sbjct: 741 VDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYG 800
Query: 412 CCLLQ----YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
C ++Q +C L +E ++ +++ + L++ YGNYV+Q+IL P V+
Sbjct: 801 CRVIQRVLEHCDDLKTQEI---IMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVI 857
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE---------------- 511
++LAG+ +S K +SNV++KCL E+ ++NE++ +
Sbjct: 858 SKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQRFQVNDDMAC 917
Query: 512 -IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ DP+GNYV+Q + + + L + V + L+ + YGK+++++V
Sbjct: 918 NMQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNA-LKRYTYGKHIVSRV 971
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 169/342 (49%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G + + D+ G RF+Q+K++ + MI E++ LM
Sbjct: 695 NKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALALMTDVFG 754
Query: 293 NHLIQKL----IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N++IQK + E KL V L + + G RV+QK ++
Sbjct: 755 NYVIQKFFEHGLAAQRRELANKLFGHV-------LTLSLQMYGCRVIQKAIEV------- 800
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +Q+ +V L + + +GNHVI++C++ P ++ + + L+T
Sbjct: 801 -VDLDQKIKMVGELDGHVMRCVRDQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTH 859
Query: 409 RSGCCLLQYCIPLAQEEQ-KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++E ++R++ +++ + +L++ YGNYVVQ++L + ++
Sbjct: 860 PYGCRVIQRVLEHCKDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAII 919
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LAGR +S K +SNVV+KCL G + +++E++ + + ++ D + NY
Sbjct: 920 KELAGRIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANY 979
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++A+V
Sbjct: 980 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARV 1020
>gi|405118729|gb|AFR93503.1| pumilio 2 [Cryptococcus neoformans var. grubii H99]
Length = 601
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 168/339 (49%), Gaps = 20/339 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ A D+ G RF+Q+K++ P D + + E+ + ++LM N++ QK+
Sbjct: 219 LNDIFGHIVEFAGDQHGSRFIQQKLEIATPEDRQKLFDEIYPNAYQLMTDVFGNYVTQKM 278
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K L+ R+L++ + G RV+QK LD L EQ++ +V
Sbjct: 279 FE--HGDQLQKAALAK-KMDGRVLQLSMQMYGCRVVQKALD--------HLLNEQRAKIV 327
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + KS + NHV++R + PP D + +LA GC +LQ
Sbjct: 328 AELEPHILECVKSSNANHVVQRMINIGPPQSIPD---SFIGHVEELAKHPYGCRVLQKTF 384
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K L+ ++ L+E +GNYV+Q ++ + + VV QL GR +
Sbjct: 385 ENLDDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKSEDRNKVVDQLKGRITTFAR 444
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-RHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K L+ + +I+E+I P+ + L+ D Y N+ +QT ++
Sbjct: 445 HKFASNVVEKALIHADPADRRALIDELIGMQPDGTNQVGMLLRDAYANFPLQTGMFAAEP 504
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFH 573
+ R+ L ++V+ P L+ GK + ++ +N ++
Sbjct: 505 AQ-REVLLEIVLPLLPPLRHTPVGKRIEGRLAQMENEYN 542
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 20/294 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q K++ N + E + E+ + LM+ N+++QK
Sbjct: 536 LKDIYDHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
E ++L ++ Q R ++ + RV+QK L Q + +QQ +
Sbjct: 596 F-----EHGSQLQKKYLAEQMRGKIVDLSTQTYACRVVQKAL--------QHILVDQQVI 642
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
L L+ + + K P+GNHVI++ ++ P ++ +++ +L+ GC ++Q
Sbjct: 643 LAKELEIDVIRVVKDPNGNHVIQKVVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQR 702
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ EE K +++++ NA L YGNYV Q+++ P+ V++++ + +
Sbjct: 703 MLEHGLEEDKEMILSELHDNAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTM 762
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQ 526
S K +SNVV+KC+ I E+ R P + Q+I D YGNYVIQ
Sbjct: 763 SNNKFASNVVEKCIEFGTAADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQ 816
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 113/223 (50%), Gaps = 20/223 (8%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID-DLHELMRHQSANHLIQKL 299
E++RG+I+ ++ CR +QK + + +D ++IL++ ++ D+ +++ + NH+IQK+
Sbjct: 609 EQMRGKIVDLSTQTYACRVVQKAL-QHILVDQQVILAKELEIDVIRVVKDPNGNHVIQKV 667
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ ++ E + +I + + R+ + G RV+Q++L+ G +E + +++
Sbjct: 668 VELVPREHINFIIDAF---RGRVRELSAHNYGCRVIQRMLEHG--------LEEDKEMIL 716
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
S L + + L +GN+V + +Q P + ++ + + ++ ++ +++ CI
Sbjct: 717 SELHDNAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNVVEKCI 776
Query: 420 PLAQ-------EEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
E+ +RL D + + YGNYV+Q +L
Sbjct: 777 EFGTAADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLL 819
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 150/296 (50%), Gaps = 13/296 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ +E+I + LM N++IQK
Sbjct: 12 LRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKF 71
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L V + +L + + G RV+QK L++ + EQQ +V
Sbjct: 72 FEFGTTEQKTTLAQKV---RGHVLNLALQMYGCRVIQKALES--------IPPEQQQEVV 120
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ A L+T GC ++Q +
Sbjct: 121 RELDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRIL 180
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ A+ L YGNYVVQ++L + + +VA + G+ LS
Sbjct: 181 EHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQ 240
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+KC+ + + +I+E+ + + ++ D + NYV+Q DV++
Sbjct: 241 HKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAE 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 91/246 (36%), Gaps = 39/246 (15%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N V S+ HG+ I++ L++ + + EI L TD G ++Q
Sbjct: 15 LANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEF 74
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
EQK L V + L+ YG V+Q L P+ +VV +L G +
Sbjct: 75 GTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVRELDGHVLKCVKDQ 134
Query: 482 CSSNVVQKC------------------------------------LLESGEEQSTGIINE 505
++VVQKC L EQ+ ++NE
Sbjct: 135 NGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPVLNE 194
Query: 506 IIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ H + QLI D YGNYV+Q + G R L V L H + NV+ K
Sbjct: 195 LHAHTD--QLITDQYGNYVVQHVLEHGAGED-RSRLVAAVRGKVLQLSQHKFASNVVEKC 251
Query: 566 RGNKNR 571
+ R
Sbjct: 252 VTHATR 257
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 160/338 (47%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GR++ + D+ G RF+Q+K++ + + +E++ LM
Sbjct: 705 NRARMVELSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFG 764
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 765 NYVIQKFFEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 813
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 814 DQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGC 873
Query: 413 CLLQYCIP-LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + Q +I +++ +L++ YGNYV Q++L + ++ +LA
Sbjct: 874 RVIQRILEHCGGNSQGQCIIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLA 933
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I I+ E ++ ++ D Y NYV+Q
Sbjct: 934 GQVVTMSQNKYASNVIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQK 993
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L V D+ L+ + YGK+++++V
Sbjct: 994 ILETCNEDQ-RELLLSRVKDHMQALRKYTYGKHIVSRV 1030
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 380 KRCLQKFPPDYTKDLLEEIAEN-------------CLDLATDRSGCCLLQYCIPLAQEEQ 426
+R QKF T LEE+ N ++ + D+ G +Q + E+
Sbjct: 684 QRARQKFDESKTCSFLEELKSNRARMVELSDITGRVVEYSADQHGSRFIQQKLENCTAEE 743
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
K + A+++ +A L +GNYV+Q + D+ +L G LSL V
Sbjct: 744 KTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRV 803
Query: 487 VQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+QK L +Q +++E+ H I++ + D GN+VIQ
Sbjct: 804 IQKALEVMELDQKIDLVHELDGH--IMRCVRDQNGNHVIQ 841
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 160/338 (47%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+R + ++ GR++ + D+ G RF+Q+K++ + + +E++ LM
Sbjct: 698 NRARMVELSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFG 757
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK EQ L +V +L + + G RV+QK L+ E
Sbjct: 758 NYVIQKFFEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMEL-------- 806
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+Q+ LV L + + +GNHVI++C++ P ++ ++ L+ GC
Sbjct: 807 DQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGC 866
Query: 413 CLLQYCIP-LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + Q +I +++ +L++ YGNYV Q++L + ++ +LA
Sbjct: 867 RVIQRILEHCGGNSQGQCIIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLA 926
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYVIQT 527
G+ +S K +SNV++KC + +I I+ E ++ ++ D Y NYV+Q
Sbjct: 927 GQVVTMSQNKYASNVIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQK 986
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ L V D+ L+ + YGK+++++V
Sbjct: 987 ILETCNEDQ-RELLLSRVKDHMQALRKYTYGKHIVSRV 1023
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 380 KRCLQKFPPDYTKDLLEEIAEN-------------CLDLATDRSGCCLLQYCIPLAQEEQ 426
+R QKF T LEE+ N ++ + D+ G +Q + E+
Sbjct: 677 QRARQKFDESKTCSFLEELKSNRARMVELSDITGRVVEYSADQHGSRFIQQKLENCTAEE 736
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
K + A+++ +A L +GNYV+Q + D+ +L G LSL V
Sbjct: 737 KTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRV 796
Query: 487 VQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+QK L +Q +++E+ H I++ + D GN+VIQ
Sbjct: 797 IQKALEVMELDQKIDLVHELDGH--IMRCVRDQNGNHVIQ 834
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 169/338 (50%), Gaps = 17/338 (5%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E+ LM
Sbjct: 703 NKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFG 762
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QK Q +L + +L + + G RV+QK ++ + + ++ Q
Sbjct: 763 NYVVQKFFEHGLASQRRELANKLYG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQ 819
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E ++ +++ +GNHVI++C++ P D ++ + + L+T GC
Sbjct: 820 ELDGNIMRCVRD--------QNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGC 871
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + + +++ +++ +L++ YGNYVVQ++L P + ++ +LA
Sbjct: 872 RVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELA 931
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G +S K +SNVV+KCL G + ++NE++ + + ++ D + NYV+Q
Sbjct: 932 GNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQK 991
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 992 VLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARV 1028
>gi|410730377|ref|XP_003671368.2| hypothetical protein NDAI_0G03480 [Naumovozyma dairenensis CBS 421]
gi|401780186|emb|CCD26125.2| hypothetical protein NDAI_0G03480 [Naumovozyma dairenensis CBS 421]
Length = 828
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 176/358 (49%), Gaps = 45/358 (12%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELRG------RIILVAKDEQGCRFLQKKV 264
+ S+T + + NN HH + +S SS+ EL + +A D+ GCRFLQKK+
Sbjct: 145 VASTTPSLNAKNNSSNNIGHHSNPSSSSSMAELALTPLKDLNYLKLATDQFGCRFLQKKL 204
Query: 265 DERNPIDI--EMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRL 322
+ DI +++ E+ EL+ N+LIQKL L +Q T LI S+ + +
Sbjct: 205 ESPAESDIVRDLMYEEIKPYFLELILDPFGNYLIQKLCDYLTVDQRTNLIKSIYPN---V 261
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+I + G+R +Q+++D + + + E S ++++ I V+L +GNHVI++C
Sbjct: 262 FQISINQYGTRSLQRIIDTVDNDEQSNIIIEGFSQKYTSIEQI-VTLINDLNGNHVIQKC 320
Query: 383 LQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV 440
+ KFPP +++ I E N + ++T + GCC+LQ + + +Q ++ ++
Sbjct: 321 IFKFPPSTFDFIIDTITEQNNIVAISTHKHGCCVLQKLLSVCTLDQIFKISVKLIQFLPA 380
Query: 441 LSEHSYGNYVVQYILGLK------IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL--- 491
L +GNY++Q++L + +P ++ L+ LS K SSNVV+K +
Sbjct: 381 LINDQFGNYIIQFLLDINEIDYYFLP----EIFNTLSNELCQLSCLKFSSNVVEKFIKKL 436
Query: 492 ------------LESGEEQSTGI-INEIIRHPEIVQ-----LILDPYGNYVIQTAWDV 531
+++ + G +N ++ +I LI D YGNY +QT DV
Sbjct: 437 FSNVRYQLQMNNIDANTLEVLGTSMNILLSIVDIFTINLNILIRDNYGNYALQTLLDV 494
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 19/221 (8%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
L++ D G R +QK L E P + ++ L+ +K + L P GN++I++
Sbjct: 188 LKLATDQFGCRFLQKKL---ESPAESDIVRD---LMYEEIKPYFLELILDPFGNYLIQKL 241
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
D +L++ I N ++ ++ G LQ I ++++ +I + + Y
Sbjct: 242 CDYLTVDQRTNLIKSIYPNVFQISINQYGTRSLQRIIDTVDNDEQSNIIIEGFSQKYTSI 301
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA---GRYFALSLGKCSSNVVQKCLL 492
E GN+V+Q + K P T D + A+S K V+QK L
Sbjct: 302 EQIVTLINDLNGNHVIQKCI-FKFPPSTFDFIIDTITEQNNIVAISTHKHGCCVLQKLLS 360
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I ++I+ + LI D +GNY+IQ D+++
Sbjct: 361 VCTLDQIFKISVKLIQF--LPALINDQFGNYIIQFLLDINE 399
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 43/283 (15%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID--DLHELMRHQSANH 294
Y+SIE+ I+ + D G +QK + + P + I+ + + ++ + H+
Sbjct: 298 YTSIEQ----IVTLINDLNGNHVIQKCIFKFPPSTFDFIIDTITEQNNIVAISTHKHGCC 353
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
++QKL+ V +Q+ K+ + ++ Q L + +D G+ ++Q LLD E E
Sbjct: 354 VLQKLLSVCTLDQIFKISVKLI---QFLPALINDQFGNYIIQFLLDINE--IDYYFLPE- 407
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDL-LEEIAENCLDLATDRSGCC 413
+ + L N LS ++V+++ ++K + L + I N L++
Sbjct: 408 ---IFNTLSNELCQLSCLKFSSNVVEKFIKKLFSNVRYQLQMNNIDANTLEVLGTSMNIL 464
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
L ++ N +L +YGNY +Q +L +K V+ + G
Sbjct: 465 L--------------SIVDIFTINLNILIRDNYGNYALQTLLDVK----NYSVLLEYPGN 506
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLI 516
F ++ + E E +T I N +I E++ I
Sbjct: 507 KFVTNVPHFA---------EFSHEFTTKINNLVILTKELLSSI 540
>gi|303324307|ref|XP_003072141.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111851|gb|EER29996.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 835
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I+ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL N+
Sbjct: 447 IVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFEHGNQA 506
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q L ++ +L + + G RV+QK L+ + +QQ+ +V L+N
Sbjct: 507 QKKALAQQMMG---HILNLSTQMYGCRVVQKALE--------HVLLDQQAAMVKELENQV 555
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ 426
+ K +GNHVI++ +++ P + + ++ + + A GC ++Q + E
Sbjct: 556 IKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEAD 615
Query: 427 KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNV 486
+ ++A++ + L +GNYV+Q+++ + + ++A + + S K +SNV
Sbjct: 616 RDAILAELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNV 675
Query: 487 VQKCLLESGEEQSTGII------NEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT 540
V+K L G + I+ NE P + L+ D +GNYVIQ V +G QT
Sbjct: 676 VEKTLEYGGPNDRSEILRIFTTPNERGESP-LEGLMKDQFGNYVIQKVLQVLKGDEY-QT 733
Query: 541 LYDLVVDNSPFLQSHMYGKNVLA 563
L D +V L+ H +GK + A
Sbjct: 734 LVDKIVPLLSHLKKHSHGKQIAA 756
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 26/344 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ D+ G RF+Q K++ N + E + E+ + +LM N++IQKL
Sbjct: 478 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 537
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICD---DLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
N+ Q L +QQ IC G R +QK L+ + EQQ+
Sbjct: 538 FEHGNQAQKRLL------AQQMQGNICSLSVQTYGCRTVQKALE--------HVLVEQQA 583
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+V L++ + + +GNHVI++ +++ P + + +++E AT GC ++Q
Sbjct: 584 TMVKELEDSVMKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQ 643
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ + ++A++ A L YGNYV+Q+I+ +++ + G+
Sbjct: 644 RMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVH 703
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGI------INEIIRHPEIVQLILDPYGNYVIQTAWD 530
S K +SNVV+K + EQ I +NE P ++ L+ D YGNYVIQ +
Sbjct: 704 FSKHKFASNVVEKSITFGTMEQRLAITRILSAVNEKGEGP-LLGLMRDQYGNYVIQKSLS 762
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
V +G + L ++ P L+ YGK + A + G+ +++ N
Sbjct: 763 VLEGDDYKM-LVSRILPLMPLLKKCSYGKQI-AGIEGHLHKYGN 804
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 168/331 (50%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G + + D+ G RF+Q+K++ + + +M+ E++ LM N+++QK
Sbjct: 675 LSEIAGHVFEFSSDQYGSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVVQKF 734
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
Q+ +L + +L + + G RV+QK ++ + +QQ+ +V
Sbjct: 735 FEHGTASQIRELADQL---NGHVLALSLQMYGCRVIQKAIEV--------VDVDQQTKMV 783
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L + + +GNHV+++C++ P + + ++ + + L+T GC ++Q +
Sbjct: 784 TELDGQIMRCVRDQNGNHVVQKCIECIPEEAIQFIVSTFYDQVVTLSTHPYGCRVIQRVL 843
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ ++ D ++ + L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 844 EHCHNPKTQHIMMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMS 903
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIR---HPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL + ++NE++ E +Q+++ D + NYV+Q +
Sbjct: 904 QQKFASNVIEKCLTFGTSAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDD 963
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+++ L + V + L+ + YGK+++A+V
Sbjct: 964 QQLELILNRIKVHLNA-LKKYTYGKHIVARV 993
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 170/329 (51%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 521 EIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFE 580
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ Q+ +L ++ R+L + + G RV+QK ++ + QQ+ +V+
Sbjct: 581 HGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLAQQTKMVAE 629
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + + +GNHVI++C++ P D + ++ + L+T GC ++Q +
Sbjct: 630 LDGHIMRCVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEH 689
Query: 422 AQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ +++ D ++ + +L++ YGNYVVQ++L P ++ +L G+ +S
Sbjct: 690 CDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQ 749
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQGRR 536
K +SNV++KCL + +I E++ E +++++ D + NYV+Q + ++
Sbjct: 750 KFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQ 809
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ + + + L+ + YGK+++A+V
Sbjct: 810 -REMILTRIKAHLNTLKKYTYGKHIVARV 837
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 122/245 (49%), Gaps = 22/245 (8%)
Query: 221 YNNFYARARHHHHRTSYSSIEELR----GRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
+ N+ + H T+ I+EL GR++ ++ GCR +QK ++ + ++
Sbjct: 570 FGNYVVQKFFEHGSTT--QIKELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMV 627
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
+E+ + +R Q+ NH+IQK I + ++ + + I+S Q LL G RV+Q
Sbjct: 628 AELDGHIMRCVRDQNGNHVIQKCIECIPQD-VIQFIVSTFYGQVVLLST--HPYGCRVIQ 684
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
++L+ + PT QQ+ ++ L+++ + L++ +GN+V++ L+ P +++
Sbjct: 685 RVLEHCDDPTTQQIMMDE------ILQSVCL-LAQDQYGNYVVQHVLEHGKPHERTAIID 737
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAY------VLSEHSYGNYV 450
++ + ++ + +++ C+ ++ LI +++ + V+ + + NYV
Sbjct: 738 KLIGQVVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYV 797
Query: 451 VQYIL 455
VQ +L
Sbjct: 798 VQKVL 802
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 205/429 (47%), Gaps = 26/429 (6%)
Query: 149 QSGFDLQSGFEGLNIDGLGLPRPNNLTVQRNLV------AATNRYATTNNASPS-YSNLS 201
+SG G+ G G+G+P P + + A+ R+ N PS NL+
Sbjct: 632 KSGSSTHHGYFGNPAFGVGMPYPGSPLASPVIPNSPVGPASPLRHNELNMRFPSGMRNLA 691
Query: 202 HGFLSDHHHLGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQ 261
G + H L + N Y ++T + E+ G ++ + D+ G RF+Q
Sbjct: 692 GGIMG-HWPLDAGCNMDENYAPSLLE-EFKSNKTKCLELSEIVGHVVEFSADQYGSRFIQ 749
Query: 262 KKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR 321
+K++ + ++ E++ LM N++IQK Q +L ++
Sbjct: 750 QKLETATMDEKNVVYEEIMPQALPLMTDVFGNYVIQKFFEHGLPSQRRELAGNLFG---H 806
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+L + + G RV+QK ++ + +Q+ +V L + + +GNHVI++
Sbjct: 807 VLTLSLQMYGCRVIQKAIEV--------VDLDQKIKMVEELDGHVMRCVRDQNGNHVIQK 858
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ-KARLIADVVANAYV 440
C++ P D + ++ + ++L+T GC ++Q + ++ + +++++ +++ +
Sbjct: 859 CIECIPEDNIQFIVSTFFDQVVNLSTHPYGCRVIQRILEHCKDAKTESKVMDEILGAVSM 918
Query: 441 LSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQST 500
L++ YGNYVVQ++L + ++ +LAG+ +S K +SNVV+KCL SG +
Sbjct: 919 LAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQ 978
Query: 501 GIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
++NE++ + + ++ D + NYV+Q + ++ R+ + + + L+ +
Sbjct: 979 ILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQ-RELILTRIKVHLNALKKYT 1037
Query: 557 YGKNVLAKV 565
YGK+++A+V
Sbjct: 1038 YGKHIVARV 1046
>gi|449488821|ref|XP_004176337.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1, partial
[Taeniopygia guttata]
Length = 1076
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 148/296 (50%), Gaps = 26/296 (8%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
I+V QG F+Q K++ P + +++ +E++ ++LM N++IQK + E
Sbjct: 718 FIMVISGTQG--FIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 775
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q L + + +L + + G RV+QK L+ + +QQ+ +V L
Sbjct: 776 QKLALAERI---RGHVLSLALQMYGCRVIQKALEF--------IPPDQQNEMVRELDGHV 824
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ----YCIPLA 422
+ K +GNHV+++C++ P + +++ L T GC ++Q +C+P
Sbjct: 825 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALXTHPYGCRVIQRILEHCLP-- 882
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
EQ ++ +++ + L + YGNYV+Q++L P+ + +VA++ G LS K
Sbjct: 883 --EQTLPILEELLQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 940
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQ 533
+SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q DV++
Sbjct: 941 ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 996
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 34/306 (11%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
E +RG ++ +A GCR +QK ++ P ++ E+ + + ++ Q+ NH++QK I
Sbjct: 782 ERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCI 841
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ + Q + I+ Q + + G RV+Q++L+ EQ ++
Sbjct: 842 ECV-QPQSLQFIIDAFKGQ--VFALXTHPYGCRVIQRILE--------HCLPEQTLPILE 890
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
L T L + +GN+VI+ L+ P+ ++ EI N L L+ + +++ C+
Sbjct: 891 ELLQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 950
Query: 421 LAQEEQKARLIADVV-------ANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
A ++A LI +V + Y + + Y NYVVQ ++ VA+ A R
Sbjct: 951 HASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID----------VAEPAQR 1000
Query: 474 YFALSLGKCS-SNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQT 527
+ + SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q
Sbjct: 1001 KIVMHKSEIMLSNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQK 1060
Query: 528 AWDVSQ 533
DV++
Sbjct: 1061 MIDVAE 1066
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I+ +G++ + GCR +Q+ ++ P IL E++ +L++ Q N++IQ +
Sbjct: 853 IDAFKGQVFALXTHPYGCRVIQRILEHCLPEQTLPILEELLQHTEQLVQDQYGNYVIQHV 912
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ E +K++ + + +L + S V++K + R L E +
Sbjct: 913 LEHGRPEDKSKIVAEI---RGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEV-CTMN 968
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ ++ K + N+V+++ + P K ++ + +E L ++ C+
Sbjct: 969 DGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHK-SEIMLSNVVEK--------CV 1019
Query: 420 PLAQEEQKARLIADVV-------ANAYVLSEHSYGNYVVQYILGLKIP 460
A ++A LI +V + Y + + Y NYVVQ ++ + P
Sbjct: 1020 THASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEP 1067
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 168/342 (49%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G + + D+ G RF+Q+K++ MI E++ LM
Sbjct: 695 NKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALALMTDVFG 754
Query: 293 NHLIQKL----IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N++IQK + E KL V L + + G RV+QK ++
Sbjct: 755 NYVIQKFFEHGLAAQRRELANKLFGHV-------LTLSLQMYGCRVIQKAIEV------- 800
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +Q+ +V L + + +GNHVI++C++ P ++ + + L+T
Sbjct: 801 -VDLDQKIKMVGELDGHVMRCVRDQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTH 859
Query: 409 RSGCCLLQYCIPLAQEEQ-KARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++E ++R++ +++ + +L++ YGNYVVQ++L + ++
Sbjct: 860 PYGCRVIQRVLEHCKDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAII 919
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNY 523
+LAGR +S K +SNVV+KCL G + +++E++ + + ++ D + NY
Sbjct: 920 KELAGRIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANY 979
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++A+V
Sbjct: 980 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARV 1020
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 165/331 (49%), Gaps = 20/331 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ A D+ G RF+Q+K++ D + + E+ + ++LM N++ QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKM 350
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ +Q+ K L+ R+L++ + G RV+QK LD L EQ++ +V
Sbjct: 351 FE--HGDQLQKAALAK-KMDGRVLQLSMQMYGCRVVQKALD--------HLLNEQRAKIV 399
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + KS + NHV++R + PP D E +LA GC +LQ
Sbjct: 400 AELEPHILECVKSSNANHVVQRMINIGPPQSIPDSFIGHVE---ELAKHPYGCRVLQKAF 456
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+++ K L+ ++ L+E +GNYV+Q ++ + P+ ++ QL GR L+
Sbjct: 457 ENLEDKMKRSLLDEMHECVIPLTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLAR 516
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-RHPE----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K L+ + +I E+I P+ + L+ D Y N+ +QT ++
Sbjct: 517 HKFASNVVEKALIHADPADRRVLIKELIDMQPDGTNQVGMLLRDAYANFPLQTGMFAAEP 576
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L ++V+ P L+ GK + ++
Sbjct: 577 TQ-REELLEIVLPLLPPLRHTPVGKRIEGRL 606
>gi|293333020|ref|NP_001168233.1| hypothetical protein [Zea mays]
gi|223946873|gb|ACN27520.1| unknown [Zea mays]
gi|414883721|tpg|DAA59735.1| TPA: hypothetical protein ZEAMMB73_154708 [Zea mays]
Length = 537
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 160/331 (48%), Gaps = 22/331 (6%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G++ D G RF+Q+ ++ P +I M+ E++ + L NH IQK++
Sbjct: 193 DIKGKVAAFCADRNGSRFVQQALEAAAPEEIAMVYKEIMPCVRTLAVDMFGNHAIQKILE 252
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+I +++ LL + D RV+QK D GE+ + + +E S ++
Sbjct: 253 HGPRSCKRGVISNLIG---HLLPLSLDKYSCRVVQKSFDVGEHDQKVAMAKELGSKVLRC 309
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
+++ NHV+++C++ P +L L+T GC ++Q +
Sbjct: 310 VRD--------QFANHVVQKCVECLPSKDIHSILRSFYGRAKALSTHPFGCHVIQKVLAR 361
Query: 422 AQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
++ E L A+++ N L+ +GNYVVQ ++ + + +V + AGR +S
Sbjct: 362 CKDHEIYHALTAEIMENVNKLAADRFGNYVVQQLVEHGGGAMRSAMVRRFAGRVVGMSYH 421
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHP---------EIVQLILDPYGNYVIQTAWDV 531
K +SNVV+KCL +E I +EI+ +V ++++PY N+VIQ
Sbjct: 422 KFASNVVEKCLAFGSQEDRRLIADEIVAGGGGGQQQHLDHLVDMMINPYANFVIQKMVVT 481
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
++ R++R L ++ N+ L + +G++V+
Sbjct: 482 AEERQVR-LLLEVASSNAASLARYAHGRHVI 511
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 26/344 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ D+ G RF+Q K++ N + E + E+ + +LM N++IQKL
Sbjct: 505 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 564
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICD---DLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
N+ Q L +QQ IC G R +QK L+ + EQQ+
Sbjct: 565 FEHGNQAQKRLL------AQQMQGNICSLSVQTYGCRTVQKALE--------HVLVEQQA 610
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+V L++ + + +GNHVI++ +++ P + + +++E AT GC ++Q
Sbjct: 611 TMVKELEDSVMKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQ 670
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ + ++A++ A L YGNYV+Q+I+ +++ + G+
Sbjct: 671 RMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVH 730
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGI------INEIIRHPEIVQLILDPYGNYVIQTAWD 530
S K +SNVV+K + EQ I +NE P ++ L+ D YGNYVIQ +
Sbjct: 731 FSKHKFASNVVEKSITFGTMEQRLAITRILSAVNEKGEGP-LLGLMRDQYGNYVIQKSLS 789
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
V +G + L ++ P L+ YGK + A + G+ +++ N
Sbjct: 790 VLEGDDYKM-LVSRILPLMPLLKKCSYGKQI-AGIEGHLHKYGN 831
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 180/354 (50%), Gaps = 25/354 (7%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T + E+ G ++ + D+ G RF+Q+K++ + M+ E+I LM N
Sbjct: 17 KTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGN 76
Query: 294 HLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
++IQK G++++ E KL V L + + G RV+QK ++
Sbjct: 77 YVIQKFFEHGLVSQRRELAGKLYGHV-------LTLSLQMYGCRVIQKAIEV-------- 121
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+ +Q+ +V L + + +GNHVI++C++ P D + ++ + + L+T
Sbjct: 122 VDPDQKIKMVEELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHP 181
Query: 410 SGCCLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC ++Q + ++ + +++++ +++ + +L++ YGNYVVQ++L P + ++
Sbjct: 182 YGCRVIQRVLEHCRDPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIK 241
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----IVQLILDPYGNYV 524
+LAG+ +S K +SNVV+KCL G + ++NE++ + + ++ D + NYV
Sbjct: 242 ELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYV 301
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
+Q + ++ R+ + + + L+ + YGK+++A+V R+A+
Sbjct: 302 VQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAI 354
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 540 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 599
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q+ +L ++ R+L + + G RV+QK ++ + + Q+ +V
Sbjct: 600 FEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLDLQTKMV 648
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ + + +GNHVI++C++ P + ++ + L+T GC ++Q +
Sbjct: 649 AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVL 708
Query: 420 PLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + +++ D ++ + +L++ YGNYVVQ++L P + ++ +L G+ +S
Sbjct: 709 EHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMS 768
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNV++KCL + +I E++ E +++++ D + NYV+Q +
Sbjct: 769 QQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDD 828
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ R+ + + + L+ + YGK+++A+V
Sbjct: 829 QQ-REMILTRIKTHLNTLKKYTYGKHIVARV 858
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F + +K L EIA + ++ + D+ G +Q + A E+K + ++++ A L
Sbjct: 527 LEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTL 586
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG--------------------- 480
+GNYVVQ ++ QL GR ALSL
Sbjct: 587 MTDVFGNYVVQKFFEHGSTAQIKELAGQLIGRVLALSLQMYGCRVIQKAIEVVDLDLQTK 646
Query: 481 ----------KC-----SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVI 525
+C ++V+QKC+ + I++ + ++V L PYG VI
Sbjct: 647 MVAELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIVSTF--YGQVVMLSTHPYGCRVI 704
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Q + + +Q + D ++ + L YG V+ V
Sbjct: 705 QRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHV 744
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 11/269 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + +M+ EV+ + +LM N+++QK
Sbjct: 485 LKDIDGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKF 544
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N QM K IL+ + +L + + G RV+QK L + + EQQ+ LV
Sbjct: 545 FEHGN--QMQKTILAK-QMEGHVLSLSLQMYGCRVVQKAL--------EHVLTEQQAKLV 593
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHVI++ +++ P + + +++ +LAT GC ++Q
Sbjct: 594 KELDGCVLKCIKDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMF 653
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E+Q L+ ++ L + YGNYV+Q+IL P + V+ ++ G LS
Sbjct: 654 EHCTEDQTGPLLDELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSK 713
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR 508
K +SNVV+KC+ + +I E+++
Sbjct: 714 HKFASNVVEKCVDFGSKRDRQLLIEEVLQ 742
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D GSR +Q+ L+ +Q + +E +L +AL+ +T GN+V+++
Sbjct: 492 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEE---VLPNALQLMTDVF-----GNYVLQK 543
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ L +++ + L L+ GC ++Q + EQ+A+L+ ++
Sbjct: 544 FFEHGNQMQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCVLKC 603
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ GN+V+Q + Q ++ G+ + L+ V+Q+ E+Q+
Sbjct: 604 IKDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTGP 663
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY-DLVVDNSPFLQSHMYGKN 560
+++E+ H QL+ D YGNYVIQ + +GR ++L + + + L H + N
Sbjct: 664 LLDEL--HRCTSQLVQDQYGNYVIQHI--LERGRPADKSLVIEKIRGHVLQLSKHKFASN 719
Query: 561 VLAK 564
V+ K
Sbjct: 720 VVEK 723
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 26/344 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ D+ G RF+Q K++ N + E + E+ + +LM N++IQKL
Sbjct: 446 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 505
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICD---DLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
N+ Q L +QQ IC G R +QK L+ + EQQ+
Sbjct: 506 FEHGNQAQKRLL------AQQMQGNICSLSVQTYGCRTVQKALE--------HVLVEQQA 551
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+V L++ + + +GNHVI++ +++ P + + +++E AT GC ++Q
Sbjct: 552 TMVKELEDSVMKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQ 611
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ + ++A++ A L YGNYV+Q+I+ +++ + G+
Sbjct: 612 RMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVH 671
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGI------INEIIRHPEIVQLILDPYGNYVIQTAWD 530
S K +SNVV+K + EQ I +NE P ++ L+ D YGNYVIQ +
Sbjct: 672 FSKHKFASNVVEKSITFGTMEQRLAITRILSAVNEKGEGP-LLGLMRDQYGNYVIQKSLS 730
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHN 574
V +G + L ++ P L+ YGK + A + G+ +++ N
Sbjct: 731 VLEGDDYKM-LVSRILPLMPLLKKCSYGKQI-AGIEGHLHKYGN 772
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 25/335 (7%)
Query: 205 LSDHHHLGS---STNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQ 261
+ + HL S STN S+ +F +H + + + G + A D+ G RF+Q
Sbjct: 4 MKSNQHLASEFKSTNRSAVLEDFRVNGKH-----TKPELHNIFGYVTEFATDQLGSRFIQ 58
Query: 262 KKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQR 321
+K+D P + + E+ + EL N++IQKL ++Q +L+ +
Sbjct: 59 QKLDNAPPESLMRVFEEIFPNTVELSSDVFGNYVIQKLFEHGTQDQRLRLVNKIKDCVPT 118
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
L + G RV+QK ++ E + +Q LV ++ IT + + NHVI+R
Sbjct: 119 L---SFQMYGCRVVQKAIECVE--------EAEQLELVKRVETITERAVQDQNANHVIQR 167
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+++ PD + E A N +LAT GC +LQ + + LI + + L
Sbjct: 168 IIERVDPDKLGNFPEVFANNAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNL 227
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYVVQY+L + + +V ++ R+F L+ K +SNV +K L+++ E+
Sbjct: 228 VVDMFGNYVVQYLLEFGTDEDRSRIVVKINQRFFELARHKFASNVCEKALIKANEKDKEM 287
Query: 502 IINEIIRHPE------IVQLILDPYGNYVIQTAWD 530
+I +I + I L+ D +GNYV+Q A +
Sbjct: 288 LIYRLIDRSDEASVDGIPSLMKDQFGNYVLQRAIN 322
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 145/292 (49%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ ++ + D+ G RF+Q +++ N + E + E+ + +LM N++IQKL
Sbjct: 543 LRDIYNHVVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 602
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K +L+ + +L + + G RV+QK L+ + +QQ+ L
Sbjct: 603 FEHGN--QVQKRVLAE-QMKNHVLELSLQMYGCRVVQKALE--------HVLADQQAELA 651
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHV+++ +++ P ++ + ++E LA GC ++Q +
Sbjct: 652 QELRADVLKCVKDQNGNHVVQKAIERVPTEHVRFIIEAFRGQVHTLAVHPYGCRVIQRIL 711
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ ++ ++ ++ +L YGNYV Q+++ P+ A V+ + + LS
Sbjct: 712 EYCKPHEQVGILEELHQCTAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSK 771
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-HPEIVQ----LILDPYGNYVIQ 526
K +SNVV+KC+ EQ I+N + H + +I DPYGNYVIQ
Sbjct: 772 HKFASNVVEKCIEFGTHEQRRAIVNTVNHVHSNGISPLQLMIKDPYGNYVIQ 823
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 170/329 (51%), Gaps = 17/329 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
E+ G ++ + D+ G RF+Q+K++ + + +M+ SE++ LM N+++QK
Sbjct: 303 EIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFE 362
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ Q+ +L ++ R+L + + G RV+QK ++ + QQ+ +V+
Sbjct: 363 HGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEV--------VDLAQQTKMVAE 411
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L + + +GNHVI++C++ P D + ++ + L+T GC ++Q +
Sbjct: 412 LDGHIMRCVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEH 471
Query: 422 AQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ +++ D ++ + +L++ YGNYVVQ++L P ++ +L G+ +S
Sbjct: 472 CDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQ 531
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII---RHPEIVQLIL-DPYGNYVIQTAWDVSQGRR 536
K +SNV++KCL + +I E++ E +++++ D + NYV+Q + ++
Sbjct: 532 KFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQ 591
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R+ + + + L+ + YGK+++A+V
Sbjct: 592 -REMILTRIKAHLNTLKKYTYGKHIVARV 619
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 122/245 (49%), Gaps = 22/245 (8%)
Query: 221 YNNFYARARHHHHRTSYSSIEELR----GRIILVAKDEQGCRFLQKKVDERNPIDIEMIL 276
+ N+ + H T+ I+EL GR++ ++ GCR +QK ++ + ++
Sbjct: 352 FGNYVVQKFFEHGSTT--QIKELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMV 409
Query: 277 SEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQ 336
+E+ + +R Q+ NH+IQK I + ++ + + I+S Q LL G RV+Q
Sbjct: 410 AELDGHIMRCVRDQNGNHVIQKCIECIPQD-VIQFIVSTFYGQVVLLST--HPYGCRVIQ 466
Query: 337 KLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
++L+ + PT QQ+ ++ L+++ + L++ +GN+V++ L+ P +++
Sbjct: 467 RVLEHCDDPTTQQIMMDE------ILQSVCL-LAQDQYGNYVVQHVLEHGKPHERTAIID 519
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAY------VLSEHSYGNYV 450
++ + ++ + +++ C+ ++ LI +++ + V+ + + NYV
Sbjct: 520 KLIGQVVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYV 579
Query: 451 VQYIL 455
VQ +L
Sbjct: 580 VQKVL 584
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 150/292 (51%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ + D+ G RF+Q+K++ N + + I E+ + +LM+ N++IQK
Sbjct: 449 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKF 508
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K +L+ + +++ + + RV+QK L + + EQQ+ LV
Sbjct: 509 FEHGN--QVQKKVLAA-QMKGKVVDLSMQMYACRVVQKAL--------EHVLVEQQAELV 557
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ V + K +GNHV+++ ++ P Y +++ LA GC ++Q +
Sbjct: 558 DELQPDIVKVVKDQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRML 617
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K ++ ++ +A VL YGNYV Q+++ P+ A ++ + + LS
Sbjct: 618 EYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSK 677
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-HPE---IVQLIL-DPYGNYVIQ 526
K +SNVV+KC+ E+ I ++ P+ +QL++ D YGNYVIQ
Sbjct: 678 HKFASNVVEKCIEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQ 729
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G+++ ++ CR +QK ++ ++ E+ D+ ++++ Q+ NH++QK+I
Sbjct: 523 QMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVKDQNGNHVVQKVIE 582
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
++ Q ++ Q + ++ G RV+Q++L+ G T + + ++++
Sbjct: 583 LV-PRQYIDFVMDSFRGQ--VSQLAAHTYGCRVIQRMLEYG--------TDQDKEVILTE 631
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N L +GN+V + +Q P+ ++ + + L+ + +++ CI
Sbjct: 632 LHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEH 691
Query: 422 AQEEQK-------ARLIADVVANAYVLSEHSYGNYVVQYIL 455
E++ + D + ++ + YGNYV+Q +L
Sbjct: 692 GSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLL 732
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ RG++ +A GCR +Q+ ++ D E+IL+E+ + L+ Q N++ Q +
Sbjct: 593 MDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHV 652
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I E K+I V S +L+ + S V++K ++ G R+ + ++ ++
Sbjct: 653 IQHGKPEDRAKMIHLVTS---QLVTLSKHKFASNVVEKCIEHGSPEERKSIREQLTTMGP 709
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+ + + K +GN+VI++ L + + +EE+ + L +G
Sbjct: 710 DGTSPLQLMM-KDQYGNYVIQKLLNQLDGGDREAFIEEMKPQFIALKKTSTG 760
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 161/312 (51%), Gaps = 18/312 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSA 292
+T + ++ G I+ + D+ G RF+Q+K++ + +++ E++ + +L++
Sbjct: 29 KTRKWELRDIFGYIVEFSGDQHGSRFIQQKLESATSEEKQIVFDEIVPESALQLIQDVFG 88
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQKL + Q T L ++ + +L++ + G RV+QK A EY +
Sbjct: 89 NYVIQKLFEYGTQVQKTALANTM---ENHILQLSLQMYGCRVVQK---AIEY-----ILP 137
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
EQQ+ V L+ + + +GNHVI++ +++ P+ + + +L+T GC
Sbjct: 138 EQQASFVKELEAHVLKIVMDANGNHVIQKLIERVSPERL-GFVHSFRGSVYELSTHPFGC 196
Query: 413 CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
+LQ C ++Q L+ ++ L + +GNYVVQ++L P+ ++++L G
Sbjct: 197 RVLQRCFEYLTDDQTRPLLDELHKYTSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRG 256
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQT 527
+ ++ K +SNV +K L+ + EE +I+EI+ +V ++ D + NYV+Q
Sbjct: 257 QMLHMAKHKFASNVCEKALITADEENQRLLIDEIMTPRADGFSPVVTMMKDQFANYVLQR 316
Query: 528 AWDVSQGRRIRQ 539
A V+ G + +Q
Sbjct: 317 ALSVATGEQKKQ 328
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 161/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 486 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 545
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 546 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 594
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + +GNHVI++ +++ P + + ++ A GC ++Q +
Sbjct: 595 KELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRML 654
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++A++ A A L ++GNYV+Q+++ A +++ + R S
Sbjct: 655 EHCKEPDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSK 714
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q T I+ ++ + ++ L+ D YGNYV+QT +G
Sbjct: 715 HKFASNVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 774
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R+ L + P L+ YGK ++A
Sbjct: 775 PE-REALVKQIELQLPELKKTNYGKQIVA 802
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 41/230 (17%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ D+ G +QK V+ + I I++ +H+ H +IQ
Sbjct: 592 SMVKELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQ 651
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q +++ GE + ++ S+
Sbjct: 652 RMLEHCKEPDRQAILAELHACAASLI---PDTFGNYVIQHVIENGEEHDKAKII----SI 704
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ ++L + L DR LL
Sbjct: 705 VISRL----LVFSKHKFASNVVEKSIEFGAEGQRTEILRQ-----LTTPNDRGENPLLS- 754
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG-LKIPQVTADV 466
L+ D YGNYVVQ +LG LK P+ A V
Sbjct: 755 ------------LMGD-----------QYGNYVVQTVLGELKGPEREALV 781
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 161/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 512 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 571
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 572 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 620
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + +GNHVI++ +++ P + + ++ A GC ++Q +
Sbjct: 621 KELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRML 680
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++A++ A A L ++GNYV+Q+++ A +++ + R S
Sbjct: 681 EHCKEPDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSK 740
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q T I+ ++ + ++ L+ D YGNYV+QT +G
Sbjct: 741 HKFASNVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 800
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R+ L + P L+ YGK ++A
Sbjct: 801 PE-REALVKQIELQLPELKKTNYGKQIVA 828
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 41/230 (17%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ D+ G +QK V+ + I I++ +H+ H +IQ
Sbjct: 618 SMVKELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQ 677
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q +++ GE + ++ S+
Sbjct: 678 RMLEHCKEPDRQAILAELHACAASLI---PDTFGNYVIQHVIENGEEHDKAKII----SI 730
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ ++L + L DR LL
Sbjct: 731 VISRL----LVFSKHKFASNVVEKSIEFGAEGQRTEILRQ-----LTTPNDRGENPLLS- 780
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG-LKIPQVTADV 466
L+ D YGNYVVQ +LG LK P+ A V
Sbjct: 781 ------------LMGD-----------QYGNYVVQTVLGELKGPEREALV 807
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 39/310 (12%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDD----------LHELMRHQSANHLI 296
I+ A +QG +LQ D D + S+++D ++ LM Q H+
Sbjct: 144 FIMFASTQQGSEYLQ---DLLATSDSYLTTSKILDKVTASVVGIPVINYLMVDQHGYHVC 200
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
KLI N+ Q+T ++ + + ++ +RIC ++GS++++KL+ + ++S
Sbjct: 201 SKLIDSCNDIQLTLILERITKNTEQFVRICCAINGSKMIKKLIK-----------KVKRS 249
Query: 357 LLVSALKNITVSLSKSPH-------GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
L+S L TVSL K + G++V+ C+ L E +CL LATD
Sbjct: 250 CLISYL---TVSLYKGFYQLAINQIGSYVVVFCMDCLDIQQNALLYEAAISHCLILATDA 306
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GC I Q ++ L+ + NA LS+ GN+VVQ +LGL+ P + A + AQ
Sbjct: 307 IGCVSANKFIDRIQGSRRQTLLELISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGAQ 366
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--HPEIVQLILDPYGNYVIQT 527
L G Y LS K S+VV+KCL+ + + +++ +++Q+ D +GNYVIQ
Sbjct: 367 LKGHYVRLSFQKWGSHVVEKCLVSQAMVYA---VQDLLTCGSSQLLQIARDQFGNYVIQK 423
Query: 528 AWDVSQGRRI 537
A V++ + I
Sbjct: 424 ALKVTKKKNI 433
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 18/336 (5%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T ++++ ++ + D+ G RF+Q+K++ + ++I SE+ + +LM N
Sbjct: 502 KTKRYELKDIYNHVVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGN 561
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK N+ Q L + + +L++ + G RV+QK L+ + E
Sbjct: 562 YVIQKFFEHGNQLQKAMLAKQM---EGHVLKLSLQMYGCRVVQKALE--------HVLTE 610
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
QQ+ L+ + + K +GNHV+++ +++ P + +L+ LAT GC
Sbjct: 611 QQATLIKEIDGNVLKCVKDQNGNHVVQKAIERVPAQHIDFILKAFKGQVQSLATHPYGCR 670
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q + E ++ ++ ++ Y L + YGNYV Q+++ P+ A ++ ++
Sbjct: 671 VIQRMLEHCDEPAQSSILQELNMCLYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQH 730
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR------HPEIVQLILDPYGNYVIQT 527
S K +SNVV+K + E+Q ++ I P + L+ D YGNYVIQ
Sbjct: 731 VIQFSKHKFASNVVEKSIQYGNEKQRKEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQK 790
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ R TL + + L+ YGK + A
Sbjct: 791 LLFLLD-EEDRDTLIEAIKPQLANLKRFSYGKQLNA 825
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 163/342 (47%), Gaps = 26/342 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ D+ G RF+Q K++ N + E + E+ + +LM N++IQKL
Sbjct: 508 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 567
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICD---DLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
N+ Q L +QQ IC G R +QK L+ + EQQ+
Sbjct: 568 FEHGNQAQKRLL------AQQMQGNICSLSVQTYGCRTVQKALE--------HVLVEQQA 613
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ 416
+V L++ + + +GNHVI++ +++ P + + +++E AT GC ++Q
Sbjct: 614 TMVKELEDSVMKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQ 673
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA 476
+ + ++A++ A L YGNYV+Q+I+ +++ + G+
Sbjct: 674 RMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVH 733
Query: 477 LSLGKCSSNVVQKCLLESGEEQSTGI------INEIIRHPEIVQLILDPYGNYVIQTAWD 530
S K +SNVV+K + EQ I +NE P ++ L+ D YGNYVIQ +
Sbjct: 734 FSKHKFASNVVEKSITFGTMEQRLAITRILSAVNEKGEGP-LLGLMRDQYGNYVIQKSLS 792
Query: 531 VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
V +G + L ++ P L+ YGK + A + G+ +++
Sbjct: 793 VLEGEDYKM-LVSRIMPLMPLLKKCSYGKQI-AGIEGHLHKY 832
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 161/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 512 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 571
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 572 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 620
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + +GNHVI++ +++ P + + ++ A GC ++Q +
Sbjct: 621 KELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRML 680
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++A++ A A L ++GNYV+Q+++ A +++ + R S
Sbjct: 681 EHCKEPDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSK 740
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q T I+ ++ + ++ L+ D YGNYV+QT +G
Sbjct: 741 HKFASNVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKG 800
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R+ L + P L+ YGK ++A
Sbjct: 801 PE-REALVKQIELQLPELKKTNYGKQIVA 828
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 41/230 (17%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ D+ G +QK V+ + I I++ +H+ H +IQ
Sbjct: 618 SMVKELENHVLKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQ 677
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q +++ GE + ++ S+
Sbjct: 678 RMLEHCKEPDRQAILAELHACAASLI---PDTFGNYVIQHVIENGEEHDKAKII----SI 730
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ ++L + L DR LL
Sbjct: 731 VISRL----LVFSKHKFASNVVEKSIEFGAEGQRTEILRQ-----LTTPNDRGENPLLS- 780
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG-LKIPQVTADV 466
L+ D YGNYVVQ +LG LK P+ A V
Sbjct: 781 ------------LMGD-----------QYGNYVVQTVLGELKGPEREALV 807
>gi|326433440|gb|EGD79010.1| hypothetical protein PTSG_11819 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 167/342 (48%), Gaps = 21/342 (6%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHL 295
S + + +L GRI+ ++ D+ G R +Q ++ P ++ +L EV + L+++M N++
Sbjct: 567 SSTRLRDLAGRIVELSADQHGSRMIQHCIESATPAEMHKLLEEVGEQLYQVMTDVFGNYV 626
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQKL+ + ++ + + R+ + G RV+Q++L + E +
Sbjct: 627 IQKLLQYGDGTVQHAIVNGM---RGRVPALSMHNYGCRVVQEVLAT-------VTSAELR 676
Query: 356 SLLVSALKNITVS-LSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
++++ L+ VS L H NHVI++C+ PD ++ ++ GC +
Sbjct: 677 NIVLKELEAYNVSDLIMDQHANHVIQKCVTSLSPDNLGFVISACERQASAMSRHLYGCRV 736
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q I + Q A + +V+ + L +++YGNYV+Q++L + V+ ++G
Sbjct: 737 IQRLIEQCESTQLALVYKNVLDDCASLMKNAYGNYVIQHVLEHGKQEHRDVVMDCVSGNL 796
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ---------LILDPYGNYVI 525
LS K +SNV++K L + +Q + ++ E+ R + ++ D Y NYVI
Sbjct: 797 LTLSQHKFASNVIEKFLRVARADQISSLVAELCRSTALPDGTTAAPLHIMMKDKYANYVI 856
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
QT + R+ + L D + N L+ + YGK+++AK
Sbjct: 857 QTLMQFAP-RQTQMALLDYIHANREVLRGYNYGKHIVAKAEA 897
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 375 GNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADV 434
GN+ ++ ++ D + L ++A ++L+ D+ G ++Q+CI A + +L+ +V
Sbjct: 552 GNNGLQNTFRRLNLD-SSTRLRDLAGRIVELSADQHGSRMIQHCIESATPAEMHKLLEEV 610
Query: 435 VANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLES 494
Y + +GNYV+Q +L V +V + GR ALS+ VVQ+ L
Sbjct: 611 GEQLYQVMTDVFGNYVIQKLLQYGDGTVQHAIVNGMRGRVPALSMHNYGCRVVQEVLATV 670
Query: 495 GEEQSTGIINEIIRHPEIVQLILDPYGNYVIQ 526
+ I+ + + + LI+D + N+VIQ
Sbjct: 671 TSAELRNIVLKELEAYNVSDLIMDQHANHVIQ 702
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L V LS HG+ +I+ C++ P LLEE+ E + TD G ++Q +
Sbjct: 574 LAGRIVELSADQHGSRMIQHCIESATPAEMHKLLEEVGEQLYQVMTDVFGNYVIQKLLQY 633
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFA--LSL 479
+ ++ + LS H+YG VVQ +L ++V + Y L +
Sbjct: 634 GDGTVQHAIVNGMRGRVPALSMHNYGCRVVQEVLATVTSAELRNIVLKELEAYNVSDLIM 693
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
+ +++V+QKC+ + +I+ R + L YG VIQ + + ++
Sbjct: 694 DQHANHVIQKCVTSLSPDNLGFVISACERQASAMSRHL--YGCRVIQRLIEQCESTQL-A 750
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAM 578
+Y V+D+ L + YG V+ V + + H V M
Sbjct: 751 LVYKNVLDDCASLMKNAYGNYVIQHVLEHGKQEHRDVVM 789
>gi|390598145|gb|EIN07544.1| hypothetical protein PUNSTDRAFT_53691 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 570
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 19/301 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS--ANHLIQ 297
+ ++ G + D+ G RF+Q+K++ + + E + +E++ H L Q N+++Q
Sbjct: 234 LADIAGHVAEFGGDQHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNYVVQ 293
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
KL+ + Q + + +L + + G RV+QK L EY L + Q+
Sbjct: 294 KLLEHCSPAQRVAIAECL---SDHVLALSLQMYGCRVVQKAL---EY-----LPESHQAK 342
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
V L+ + K +GNHVI++ +++ P + + +LA+ GC +LQ
Sbjct: 343 FVRELEPHVIRCVKDANGNHVIQKIIERVNPSLLT-FVNGFQSHVFELASHPYGCRVLQR 401
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
C+ EQ L+A++ L + +GNYV+Q++L PQ A+VV +L G+ +
Sbjct: 402 CLEYLSPEQTRGLLAELHECTIQLMQDQFGNYVIQFVLEHGAPQDRAEVVQKLRGQMLPM 461
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVS 532
+ K +SNV +K L+ + + +I+EI+ IV ++ D Y NYV+Q A +
Sbjct: 462 ARHKFASNVCEKALVTAEPDSRRALIDEILAQGADGSSPIVTMMKDQYANYVLQRAVSTA 521
Query: 533 Q 533
+
Sbjct: 522 E 522
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ + + +A GCR LQ+ ++ +P +L+E+ + +LM+ Q N++IQ +
Sbjct: 379 VNGFQSHVFELASHPYGCRVLQRCLEYLSPEQTRGLLAELHECTIQLMQDQFGNYVIQFV 438
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + +++ + + ++L + S V +K L E +R+ L E +
Sbjct: 439 LEHGAPQDRAEVVQKL---RGQMLPMARHKFASNVCEKALVTAEPDSRRALIDEILAQGA 495
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDL 405
I V++ K + N+V++R + PD + L+ I L +
Sbjct: 496 DGSSPI-VTMMKDQYANYVLQRAVSTAEPDQQETLISRIRPQLLTM 540
>gi|242043076|ref|XP_002459409.1| hypothetical protein SORBIDRAFT_02g004180 [Sorghum bicolor]
gi|241922786|gb|EER95930.1| hypothetical protein SORBIDRAFT_02g004180 [Sorghum bicolor]
Length = 360
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 164/333 (49%), Gaps = 24/333 (7%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G++ D G RF+Q+ ++ P +I M+ E + + L NH IQK++
Sbjct: 16 DIKGKVAASCADRNGSRFVQQAIEVATPEEIVMVYKETMPCVRTLAVDMFGNHAIQKILE 75
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ ++I +++ +L + D RV+QK D GE+ + + +E S ++
Sbjct: 76 HGPKSCKREVISNLIG---HMLPLSLDKYSCRVIQKAFDVGEHDQKLVMAKELSSKVLKC 132
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
+++ NHVI++C++ PP +L+ L+T GC ++Q +
Sbjct: 133 VRD--------QFANHVIQKCIECLPPKDIHFILQSFCSRAKALSTHPYGCHVIQKVLTR 184
Query: 422 AQEEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
++++ L ++++ N LS +GNYVVQ +L + + +V Q AGR +S
Sbjct: 185 CKDQEIYHALTSEIMENINKLSADKFGNYVVQQLLEHGGHAMRSTMVRQFAGRVVTMSYH 244
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII-----------RHPEIVQLILDPYGNYVIQTAW 529
K +SNVV+KCL +E I +EI+ +V ++++PY N+VIQ
Sbjct: 245 KFASNVVEKCLTFGSQEDRRLIADEIVVGAGGGGGGHQHFDHLVDMMINPYANFVIQKMV 304
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
++ +++ + L ++ N+ L + +G++V+
Sbjct: 305 VTTEEQQV-ELLLEVASSNATRLARYPHGRHVM 336
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I L G ++ ++ D+ CR +QK D ++ E+ + + +R Q ANH+IQK
Sbjct: 86 ISNLIGHMLPLSLDKYSCRVIQKAFDVGEHDQKLVMAKELSSKVLKCVRDQFANHVIQKC 145
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I L + + ++ S S + L G V+QK+L TR + + +L
Sbjct: 146 IECLPPKDIHFILQSFCSRAKAL---STHPYGCHVIQKVL------TRCKDQEIYHALTS 196
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
++NI LS GN+V+++ L+ ++ + A + ++ + +++ C+
Sbjct: 197 EIMENIN-KLSADKFGNYVVQQLLEHGGHAMRSTMVRQFAGRVVTMSYHKFASNVVEKCL 255
Query: 420 PLAQEEQKARLIAD--VVANAYVLSEHSYGNYVVQYIL 455
+E + RLIAD VV H + +++V ++
Sbjct: 256 TFGSQEDR-RLIADEIVVGAGGGGGGHQHFDHLVDMMI 292
>gi|392869402|gb|EJB11747.1| mRNA binding protein Pumilio 2 [Coccidioides immitis RS]
Length = 886
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 491 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 550
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L ++ +L + + G RV+QK L + + +QQ+ +V
Sbjct: 551 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKAL--------EHVLLDQQAAMV 599
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ + + A GC ++Q +
Sbjct: 600 KELENQVIKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRML 659
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++ ++ + L +GNYV+Q+++ + + ++A + + S
Sbjct: 660 EHCNEADRDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSK 719
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K LE G I I P + L+ D +GNYVIQ V +
Sbjct: 720 HKFASNVVEKT-LEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLK 778
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G QTL D +V L+ H +GK + A
Sbjct: 779 GDEY-QTLVDKIVPLLSHLKKHSHGKQIAA 807
>gi|449438629|ref|XP_004137090.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 192
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 394 LLEEIAENCLDLATDRSGCCLLQYCIPLAQ---EEQKARLIADVVANAYVLSEHSYGNYV 450
++ +A+NCL+LA ++ CC+LQ CI + + + LI+ ++ + Y LS+H YGNYV
Sbjct: 4 IILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYV 63
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-- 508
+Q+++ L + ++ +L ++ LS+ K SNVV+KC L E S II EI+
Sbjct: 64 IQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKC-LSCCEGISNDIIFEILEGN 122
Query: 509 -HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRG 567
++Q+ + YGN+V+QT +++G +IR+ L + + LQ H+YG+NV++ +R
Sbjct: 123 GRDRLIQICTNQYGNFVVQTVMSIAKG-KIRKLLEKAIKSHWLVLQQHLYGRNVISSIRR 181
Query: 568 NKNR 571
+K +
Sbjct: 182 DKKK 185
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
Q +L+S L LSK P+GN+VI+ +Q + + +++E+ ++L+ D+ G +
Sbjct: 40 QEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNV 99
Query: 415 LQYCIPLAQEEQKARLIADVVANA----YVLSEHSYGNYVVQYILGL 457
++ C+ + + + N + + YGN+VVQ ++ +
Sbjct: 100 VEKCLSCCEGISNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSI 146
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 171/361 (47%), Gaps = 28/361 (7%)
Query: 211 LGSSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI 270
S+ A + F+ + SS E L I ++KD++G RF+QKK+D +
Sbjct: 115 FSSTPAAEPLKDQFFEEVYAFAKKRGISSSENL---ICAISKDQEGSRFIQKKLDGASAE 171
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
+I M E+ + +L+ N+++QK + + EQ K+ ++ + ++ + +
Sbjct: 172 EIAMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQREKIFSAM---EGTIIPLALHMY 228
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
G RV+QK L+ + + +V +K + L +GNHV+++C++ D+
Sbjct: 229 GCRVIQKALECKDINRK----------IVERIKGHVIDLVCDQNGNHVVQKCVECVDSDF 278
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
+++E E+ + L+ R GC ++Q + A I +++NA +L E YGNYV
Sbjct: 279 ---VIKEFEEDAVSLSRHRYGCRVIQRI--FENSTKCASAIDKIISNAKLLVEDQYGNYV 333
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-- 508
+Q+IL ++ L+ S K +SNV++KC++ E ++ ++
Sbjct: 334 IQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVICGTMEDRKHMLKQLKSAV 393
Query: 509 ----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
++ + +D +GNYVIQ DV G ++ L + N L+ Y K +++K
Sbjct: 394 GPSGEDMLIHITMDKFGNYVIQRLLDVLTGAD-KEVLMAHLKANISDLKKSSYAKCIISK 452
Query: 565 V 565
+
Sbjct: 453 L 453
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 148/319 (46%), Gaps = 12/319 (3%)
Query: 246 RIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
+II +A + G L+ + E+ P I +I + L H S ++ +L +
Sbjct: 190 QIIEMALNFSGSFLLRSALAEKKPESKSTIFEGLIAHIVTLAVHPSGCNVFIRLTEACDA 249
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
Q+++++ ++ ++R+ D GS+ +Q+L+ R L +V+AL
Sbjct: 250 NQLSQILSKLILPPSTIIRVSHDPIGSKSIQRLIQVLR---RSPLVVP----VVTALAAG 302
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
L K G VI RCL + ++L C+ LAT GC L I
Sbjct: 303 FYELMKDQQGAMVISRCLALLSSEQNEELYRAAILPCVALATHAKGCIALNSFINNVIGP 362
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
+ L+ + N LS+ GN+VVQ+IL L P T+ + L G Y LS+ K S+
Sbjct: 363 YRDLLLHKITDNTVFLSQDPRGNFVVQHILELHHPVFTSKICHLLQGYYVRLSVQKSGSH 422
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR--QTLYD 543
+V+KCL + + E+ + QL D +GNYVIQTA V++ I+ ++L +
Sbjct: 423 IVEKCL---KSHWMSFAVKELTTSGRLPQLAHDQFGNYVIQTALRVTKDANIQLYRSLLE 479
Query: 544 LVVDNSPFLQSHMYGKNVL 562
+ P L SH++GKN+
Sbjct: 480 ALEPYLPSLASHLHGKNLF 498
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 162/332 (48%), Gaps = 21/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 490 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 549
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 550 FEHGNQTQ--KKILAN-QMKGHILSLSTQMYGCRVVQKALE--------HILTDQQASMV 598
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LAT GC ++Q +
Sbjct: 599 KELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRML 658
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++ ++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 659 EHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSK 718
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q +I+ + E ++ L+ D YGNYVIQ + Q
Sbjct: 719 HKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKI--LGQL 776
Query: 535 RRIRQTLYDLVVDNSPF---LQSHMYGKNVLA 563
+ Y L V P L+ YGK ++A
Sbjct: 777 DDTSEEKYSLAVRIQPMLDQLKKFSYGKQIVA 808
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 42/186 (22%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 596 SMVKELENHVLRCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVERLATHPYGCRVI 654
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL E+ +L+ Q N++IQ +I ++ +++I+ V+S
Sbjct: 655 QRMLEHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS--- 711
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIK 380
+LL S V++K ++ GE R+Q+ S+ ++ +SL + +GN+VI+
Sbjct: 712 QLLTYSKHKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSL-ISLMRDQYGNYVIQ 770
Query: 381 RCLQKF 386
+ L +
Sbjct: 771 KILGQL 776
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 170/342 (49%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + +M+ E++ LM
Sbjct: 702 NKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFG 761
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QK G+ ++ E KL+ V L + + G RV+QK ++ + +
Sbjct: 762 NYVVQKFFEHGLASQRRELANKLLGHV-------LTLSLQMYGCRVIQKAIEVVDLDQKI 814
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
++ QE L + + +GNHVI++C++ P D ++ + + L+T
Sbjct: 815 EMVQE--------LDGNVMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTH 866
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + + D + A +L++ YGNYVVQ++L + ++
Sbjct: 867 PYGCRVIQRVLEHCEDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSSII 926
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LAG+ +S K +SNVV+KCL G + ++NE++ + + ++ D + NY
Sbjct: 927 KELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVNEMLGTTDENEPLQAMMKDQFANY 986
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++ +V
Sbjct: 987 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVTRV 1027
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 150/292 (51%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ + D+ G RF+Q+K++ N + + I E+ + +LM+ N++IQK
Sbjct: 422 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKF 481
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K +L+ + +++ + + RV+QK L + + EQQ+ LV
Sbjct: 482 FEHGN--QVQKKVLAA-QMKGKVVDLSMQMYACRVVQKAL--------EHVLVEQQAELV 530
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ V + K +GNHV+++ ++ P Y +++ LA GC ++Q +
Sbjct: 531 DELQPDIVKVVKDQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRML 590
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K ++ ++ +A VL YGNYV Q+++ P+ A ++ + + LS
Sbjct: 591 EYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSK 650
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-HPE---IVQLIL-DPYGNYVIQ 526
K +SNVV+KC+ E+ I ++ P+ +QL++ D YGNYVIQ
Sbjct: 651 HKFASNVVEKCIEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQ 702
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
+++G+++ ++ CR +QK ++ ++ E+ D+ ++++ Q+ NH++QK+I
Sbjct: 496 QMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVKDQNGNHVVQKVIE 555
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
++ Q ++ Q + ++ G RV+Q++L+ G T + + ++++
Sbjct: 556 LV-PRQYIDFVMDSFRGQ--VSQLAAHTYGCRVIQRMLEYG--------TDQDKEVILTE 604
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L N L +GN+V + +Q P+ ++ + + L+ + +++ CI
Sbjct: 605 LHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEH 664
Query: 422 AQEEQK-------ARLIADVVANAYVLSEHSYGNYVVQYIL 455
E++ + D + ++ + YGNYV+Q +L
Sbjct: 665 GSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLL 705
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ RG++ +A GCR +Q+ ++ D E+IL+E+ + L+ Q N++ Q +
Sbjct: 566 MDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHV 625
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I E K+I V S +L+ + S V++K ++ G R+ + ++ ++
Sbjct: 626 IQHGKPEDRAKMIHLVTS---QLVTLSKHKFASNVVEKCIEHGSPEERKSIREQLTTMGP 682
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSG 411
+ + + K +GN+VI++ L + + +EE+ + L +G
Sbjct: 683 DGTSPLQLMM-KDQYGNYVIQKLLNQLDGADREAFIEEMKPQFIALKKTSTG 733
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 165/324 (50%), Gaps = 22/324 (6%)
Query: 228 ARHHHHRTSYSSIEELR---GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
A+ R + S ELR G I+ + D+ G RF+Q+K++ + ++E++ E++
Sbjct: 30 AQLDEFRANKSRKWELRDIFGYIVEFSGDQHGSRFIQQKLESASSEEMEIVFDEIVPQYA 89
Query: 285 -ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
+LM+ N+++QK+ Q +L+ ++ + ++L + + G RV+QK A E
Sbjct: 90 VQLMQDVFGNYVVQKMFEYGTAAQKARLVSTM---EGQVLGLSLQMYGCRVVQK---AIE 143
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
Y + +QQ + V L + K +GNHVI++ ++ P+ + +
Sbjct: 144 Y-----VGPDQQVMFVQELSPSVLRCVKDANGNHVIQKIIEHVVPERLA-FVNAFRGSVY 197
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
+L+T GC +LQ C +EQ L+ ++ L +GNYVVQ++L PQ
Sbjct: 198 ELSTHPYGCRVLQRCFEYLPDEQTRPLLDELHKYVSNLMIDQFGNYVVQFVLEHGTPQDR 257
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLIL 517
A ++A+L G+ ++ K +SNV +K L+ + + +I+EI+ + ++ L+
Sbjct: 258 AMIIAKLTGQMNNMAKHKFASNVCEKALVTADPDSRRQLIDEIMTPKQQDGPSPLMSLMK 317
Query: 518 DPYGNYVIQTAWDVSQGRRIRQTL 541
D +GNYV+Q A V++G + Q +
Sbjct: 318 DSFGNYVLQRALTVAEGEQKEQLI 341
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 62/326 (19%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+ R + + KD+ GCR+LQ+K++ER P +++MI E + ELM N+L QKL
Sbjct: 768 LEQYRDELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHMHVVELMTDPFGNYLCQKL 827
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N+EQ T LI + +L+ I + G+R +QK+++ P EQ ++
Sbjct: 828 LEFSNDEQRTALINNAAP---QLVSIALNQHGTRALQKMIEFISTP-------EQTQTVI 877
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+AL+ V L + +GNHVI++CL + +A+ A D G ++QY +
Sbjct: 878 NALRGKVVELVQDLNGNHVIQKCLNRL----------SVAD-----AQDPFGNYVVQYIL 922
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
LA+ P T + G+ LS
Sbjct: 923 DLAE------------------------------------PHFTEPLCQTFVGKVSMLSK 946
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQ 539
K SSNV++KC + + +I E++ E+ +++ D + NYV+QTA D + R
Sbjct: 947 QKFSSNVIEKCPRTAEFQSRRLLIQEMLPAQELERMLRDSFANYVVQTAMDYADP-ETRV 1005
Query: 540 TLYDLVVDNSPFLQSHMYGKNVLAKV 565
L + + P ++ +G+ + K+
Sbjct: 1006 ALIEAIRPILPAIRQTPHGRRIAGKI 1031
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 162/332 (48%), Gaps = 21/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 472 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 531
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 532 FEHGNQTQ--KKILAN-QMKGHILSLSTQMYGCRVVQKALE--------HILTDQQASMV 580
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LAT GC ++Q +
Sbjct: 581 KELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRML 640
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++ ++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 641 EHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSK 700
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q +I+ + E ++ L+ D YGNYVIQ + Q
Sbjct: 701 HKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKI--LGQL 758
Query: 535 RRIRQTLYDLVVDNSPF---LQSHMYGKNVLA 563
+ Y L V P L+ YGK ++A
Sbjct: 759 DDTSEEKYSLAVRIQPMLDQLKKFSYGKQIVA 790
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 42/186 (22%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 578 SMVKELENHVLRCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVERLATHPYGCRVI 636
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL E+ +L+ Q N++IQ +I ++ +++I+ V+S
Sbjct: 637 QRMLEHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS--- 693
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIK 380
+LL S V++K ++ GE R+Q+ S+ ++ +SL + +GN+VI+
Sbjct: 694 QLLTYSKHKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSL-ISLMRDQYGNYVIQ 752
Query: 381 RCLQKF 386
+ L +
Sbjct: 753 KILGQL 758
>gi|119173521|ref|XP_001239193.1| hypothetical protein CIMG_10215 [Coccidioides immitis RS]
Length = 829
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 434 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 493
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L ++ +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 494 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKALE--------HVLLDQQAAMV 542
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ + + A GC ++Q +
Sbjct: 543 KELENQVIKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRML 602
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++ ++ + L +GNYV+Q+++ + + ++A + + S
Sbjct: 603 EHCNEADRDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSK 662
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K LE G I I P + L+ D +GNYVIQ V +
Sbjct: 663 HKFASNVVEKT-LEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLK 721
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G QTL D +V L+ H +GK + A
Sbjct: 722 GDEY-QTLVDKIVPLLSHLKKHSHGKQIAA 750
>gi|443699258|gb|ELT98839.1| hypothetical protein CAPTEDRAFT_180493 [Capitella teleta]
Length = 632
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+++L ++ ++D+ G RF+Q+K++ P + M+ +E++ + LM N++IQK
Sbjct: 228 LKDLANHVVEFSQDQHGSRFIQQKLERALPAEKSMVFNEILSAAYSLMTDVFGNYVIQKF 287
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ L V + +L + + G RV+QK L++ + E Q +V
Sbjct: 288 FEFGTSEQKQTLAQRV---RGHVLPLALQMYGCRVIQKALES--------IPSEMQVEIV 336
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + L++ L+T GC ++Q +
Sbjct: 337 KELDGHVLKCVKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRIL 396
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YGNYV+Q++L P+ + +V++L GR LS
Sbjct: 397 EHCVSEQTNPVLDELHVHTERLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGRVLVLSQ 456
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI 506
K +SNVV+KC+ S + +I+E+
Sbjct: 457 HKFASNVVEKCVTYSSRAERAMLIDEV 483
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D GSR +Q+ L+ + ++S++ + + + SL GN+VI++
Sbjct: 235 VVEFSQDQHGSRFIQQKLE--------RALPAEKSMVFNEILSAAYSLMTDVFGNYVIQK 286
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ + + L + + + L LA GC ++Q + E + ++ ++ +
Sbjct: 287 FFEFGTSEQKQTLAQRVRGHVLPLALQMYGCRVIQKALESIPSEMQVEIVKELDGHVLKC 346
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ GN+VVQ + P+ ++ G+ F LS V+Q+ L EQ+
Sbjct: 347 VKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRILEHCVSEQTNP 406
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR-----RIRQTLYDLVVDNSPFLQSHM 556
+++E+ H E +L+ D YGNYVIQ + GR +I L V+ L H
Sbjct: 407 VLDELHVHTE--RLVQDQYGNYVIQHVLE--HGRPEDKSKIVSELRGRVL----VLSQHK 458
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 459 FASNVVEK 466
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ SLSK G R L+ F + +L L+++A + ++ + D+ G +Q + A
Sbjct: 201 SASLSKEVTGR---SRLLEDFRNNRIPNLQLKDLANHVVEFSQDQHGSRFIQQKLERALP 257
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
+K+ + ++++ AY L +GNYV+Q + + ++ G L+L
Sbjct: 258 AEKSMVFNEILSAAYSLMTDVFGNYVIQKFFEFGTSEQKQTLAQRVRGHVLPLALQMYGC 317
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDL 544
V+QK L E I+ E+ H +++ + D GN+V+Q + + +++ Q L D
Sbjct: 318 RVIQKALESIPSEMQVEIVKELDGH--VLKCVKDQNGNHVVQKCIECVEPKQL-QFLIDA 374
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
L +H YG V+ ++
Sbjct: 375 FKGQVFTLSTHPYGCRVIQRI 395
>gi|342321718|gb|EGU13650.1| Hypothetical Protein RTG_00087 [Rhodotorula glutinis ATCC 204091]
Length = 949
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+++L G ++ + D+ G R +Q K++ + M+ E++ ++ +L AN++IQK
Sbjct: 587 LQDLAGHMVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQLSTDVFANYVIQKF 646
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q T + + + +L++ + G RV+QK L EY + +QQ LV
Sbjct: 647 FEQGSQVQKTAMAKVL---EGHVLQLSLQMYGCRVVQKAL---EY-----VLVDQQVRLV 695
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + ++ NHVI+R L++ PP++ + LAT GC +LQ
Sbjct: 696 KELDGNVLKCARDAQSNHVIQRALERVPPEHLLFITNACVGEVHSLATHPYGCRVLQRIF 755
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
Q L+ ++ + L + YGNYVVQ++L + V+A++ G+ L+
Sbjct: 756 ENCPAHQTRTLLDELHRSTQHLIQDQYGNYVVQWVLEKGDTADRSLVIAKVYGQLLPLAQ 815
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQ 526
K +SNVV+KC+L +++ +I+E+++ I +++ PY NYVIQ
Sbjct: 816 QKFASNVVEKCILYGTDDERRRLIDEVLQTGHDGSSTIKAMLVHPYANYVIQ 867
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRH---------- 289
++EL G ++ A+D Q +Q+ ++ P + I + + ++H L H
Sbjct: 695 VKELDGNVLKCARDAQSNHVIQRALERVPPEHLLFITNACVGEVHSLATHPYGCRVLQRI 754
Query: 290 -----------------QSANHLIQKLIG------VLNEEQMTKLILSVVSSQQRLLRIC 326
+S HLIQ G VL + L + +LL +
Sbjct: 755 FENCPAHQTRTLLDELHRSTQHLIQDQYGNYVVQWVLEKGDTADRSLVIAKVYGQLLPLA 814
Query: 327 DDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKF 386
S V++K + G R++L E I L P+ N+VI++CL
Sbjct: 815 QQKFASNVVEKCILYGTDDERRRLIDEVLQTGHDGSSTIKAMLVH-PYANYVIQKCLHSA 873
Query: 387 PPDYTKDLLEEIAENCLDL 405
+ L E + L+L
Sbjct: 874 LSPQREALFAETTQQILNL 892
>gi|255714993|ref|XP_002553778.1| KLTH0E06864p [Lachancea thermotolerans]
gi|238935160|emb|CAR23341.1| KLTH0E06864p [Lachancea thermotolerans CBS 6340]
Length = 732
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 52/342 (15%)
Query: 236 SYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI----EMILSEVIDDLHELMRHQS 291
S++ ++EL + VA D+ GCRFLQKK++ NP + +++ + +L+
Sbjct: 164 SWTPLDELD--YVKVATDQFGCRFLQKKLE--NPQECCAVRDLMYRHIKPYFLDLILDPF 219
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+LIQKL L +Q T+L+ S+ + +I + G+R +QK++D + T
Sbjct: 220 GNYLIQKLCEYLTTDQKTQLVESIYP---HVFQISINQYGTRSLQKVIDTVD-------T 269
Query: 352 QEQQSLLVSAL-KNIT-----VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN--CL 403
Q L++S +N T V L +GNHV+++C+ KFPP +++ I +N +
Sbjct: 270 DAQVDLIISGFGQNFTSIEQVVVLINDLNGNHVVQKCIFKFPPSKFGFIIDAIVDNNNIV 329
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ-- 461
++T + GCC+LQ + + +Q ++ +V L +GNY++Q++L +K
Sbjct: 330 KISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLRSLINDQFGNYIIQFLLDIKELDFY 389
Query: 462 VTADVVAQLAGRYFALSLGKCSSNVVQKCLLE------------------SGEEQSTGII 503
+ ++ +L+G LS K SSNVV+K + + + E I
Sbjct: 390 LLGEIYDKLSGELCQLSCLKFSSNVVEKFIKKLFTILKLALSAAPPARNSAVSEDVVAIA 449
Query: 504 NEIIRHPEIV------QLILDPYGNYVIQTAWDVSQGRRIRQ 539
+I+ + V LI D YGNY +QT DV ++ Q
Sbjct: 450 MKILLNVIDVFTVNLNILIRDNYGNYALQTLLDVKNYTKLLQ 491
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 391 TKDLL-EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNY 449
+DL+ I LDL D G L+Q +QK +L+ + + + +S + YG
Sbjct: 199 VRDLMYRHIKPYFLDLILDPFGNYLIQKLCEYLTTDQKTQLVESIYPHVFQISINQYGTR 258
Query: 450 VVQYILGLKIPQVTADVVAQLAGRYF------ALSLGKCSSN-VVQKCLLESGEEQSTGI 502
+Q ++ D++ G+ F + + + N VVQKC+ + + I
Sbjct: 259 SLQKVIDTVDTDAQVDLIISGFGQNFTSIEQVVVLINDLNGNHVVQKCIFKFPPSKFGFI 318
Query: 503 INEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
I+ I+ + IV++ +G V+Q V ++I + +V
Sbjct: 319 IDAIVDNNNIVKISTHKHGCCVLQKLLSVCTLQQIFKISVKIV 361
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 162/332 (48%), Gaps = 21/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 528 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 587
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 588 FEHGNQTQ--KKILAN-QMKGHILSLSTQMYGCRVVQKALE--------HILTDQQASMV 636
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LAT GC ++Q +
Sbjct: 637 KELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRML 696
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++ ++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 697 EHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSK 756
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q +I+ + E ++ L+ D YGNYVIQ + Q
Sbjct: 757 HKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKI--LGQL 814
Query: 535 RRIRQTLYDLVVDNSPF---LQSHMYGKNVLA 563
+ Y L V P L+ YGK ++A
Sbjct: 815 DDTSEEKYSLAVRIQPMLDQLKKFSYGKQIVA 846
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 42/186 (22%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 634 SMVKELENHVLRCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVERLATHPYGCRVI 692
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL E+ +L+ Q N++IQ +I ++ +++I+ V+S
Sbjct: 693 QRMLEHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS--- 749
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIK 380
+LL S V++K ++ GE R+Q+ S+ ++ +SL + +GN+VI+
Sbjct: 750 QLLTYSKHKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSSL-ISLMRDQYGNYVIQ 808
Query: 381 RCLQKF 386
+ L +
Sbjct: 809 KILGQL 814
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 203/434 (46%), Gaps = 38/434 (8%)
Query: 149 QSGFDLQSGFEGLNIDGLGLPRPNNLTVQRNLVAATNRYATTNNASP-SYSNLSHGFLSD 207
+SG G+ G G+GL P T N V +T + + SP ++ L+ F S
Sbjct: 617 KSGSSTPHGYYGNPAYGVGLSYPG--TAMANSVVST---SPVGSGSPIRHNELNMQFASG 671
Query: 208 HHHLGSSTNA----SSRYNNFYARA---RHHHHRTSYSSIEELRGRIILVAKDEQGCRFL 260
+L + + + +A + ++T + E+ G ++ + D+ G RF+
Sbjct: 672 MRNLAGAMGPWHVDTGNIDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFI 731
Query: 261 QKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI--GVLNE--EQMTKLILSVV 316
Q+K++ + ++ E++ LM N+++QK G+ ++ E KL
Sbjct: 732 QQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKL----- 786
Query: 317 SSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGN 376
+L + + G RV+QK ++ + + ++ QE L + + +GN
Sbjct: 787 --HGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVQE--------LDGNVMRCVRDQNGN 836
Query: 377 HVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVA 436
HVI++C++ P D ++ + + L+T GC ++Q + ++ + + D +
Sbjct: 837 HVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEIL 896
Query: 437 NAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESG 495
A +L++ YGNYVVQ++L P + ++ +LA + +S K +SNVV+KCL G
Sbjct: 897 GAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEKCLTFGG 956
Query: 496 EEQSTGIINEIIRHPE----IVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPF 551
+ +++E++ + + ++ D + NYV+Q + ++ LY + V +
Sbjct: 957 PSERQLLVSEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILYRIKVHLNA- 1015
Query: 552 LQSHMYGKNVLAKV 565
L+ + YGK+++A+V
Sbjct: 1016 LKKYTYGKHIVARV 1029
>gi|301620056|ref|XP_002939403.1| PREDICTED: pumilio homolog 1 [Xenopus (Silurana) tropicalis]
Length = 1152
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 57/333 (17%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G I+ ++D+ G RF+Q K++ P + +++ +E++ ++LM
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMV----------- 896
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
D+ G+ V+QK + G + EQ+ L
Sbjct: 897 ----------------------------DVFGNYVIQKFFEFG--------SLEQKLALA 920
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPD--YTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ +SL+ +G VI++ L+ PPD +++ E+ + L D++G ++Q
Sbjct: 921 ERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQK 980
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
CI Q Q + I D + V S YGNYV+Q++L P+ + +VA++ G L
Sbjct: 981 CIECVQP-QSLQFIIDAF-KSQVQSRDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1038
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+KC+ + + +I+E+ H + ++ D Y NYV+Q DV+
Sbjct: 1039 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1098
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + R+ + + + L+ + YGK++LAK+
Sbjct: 1099 EPAQ-RKIVMHKIRPHIATLRKYTYGKHILAKL 1130
>gi|426200142|gb|EKV50066.1| hypothetical protein AGABI2DRAFT_199387 [Agaricus bisporus var.
bisporus H97]
Length = 423
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 148/294 (50%), Gaps = 17/294 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID-DLHELMRHQSANHLIQKLI 300
++ G I+ + D+ G RF+Q K++ I ++ E++ +LM+ N++IQKL+
Sbjct: 91 DIVGHIVEFSTDQYGSRFIQTKLEGAGLDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLM 150
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++Q L V + ++ + ++ G RV+QK+++ T EQQ+ LV
Sbjct: 151 DFGTQDQRAGLARLV---ENEIVDLSLNVYGCRVVQKVIEL--------CTAEQQTQLVR 199
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
++ +++ K +GNHVI++ + P+ L + LA GC +LQ C+
Sbjct: 200 KIEPHVLTVVKDTNGNHVIQKFVMTVSPERLS-FLRTFRDAARQLAIHPYGCRVLQRCLE 258
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ +I ++ A L + +GNYVVQYIL P + AQ+ G +S
Sbjct: 259 YLPNDYCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRH 318
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ----LILDPYGNYVIQTAWD 530
K +SNVV+K L+ + E +++EI+ V L++D YGNYVIQTA +
Sbjct: 319 KFASNVVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTALN 372
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 170/342 (49%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 702 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFG 761
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QK G+ ++ E KL+ V L + + G RV+QK ++ + +
Sbjct: 762 NYVVQKFFEHGLASQRRELANKLLGHV-------LTLSLQMYGCRVIQKAIEVVDLDQKI 814
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
++ QE L + + +GNHVI++C++ P D ++ + + L+T
Sbjct: 815 EMVQE--------LDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTH 866
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + + D + A +L++ YGNYVVQ++L P + ++
Sbjct: 867 PYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSCII 926
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LAG+ +S K +SNVV+KCL G + +++E++ + + ++ D + NY
Sbjct: 927 KELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFANY 986
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++ +V
Sbjct: 987 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVTRV 1027
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 164/331 (49%), Gaps = 17/331 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM N+++QK
Sbjct: 688 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKF 747
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
Q +L ++ +L + + G RV+QK ++ + +Q+ +V
Sbjct: 748 FEHGLAPQRRELANKLIG---HVLTLSLQMYGCRVIQKAIEV--------VDLDQKIEMV 796
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + +GNHVI++C++ P + ++ + + L+T GC ++Q +
Sbjct: 797 KELDGNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVL 856
Query: 420 PLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + + D + A +L++ YGNYVVQ++L P + ++ +LAG+ +S
Sbjct: 857 EHCESPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMS 916
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KCL SG + +++E++ + + ++ D + NYV+Q +
Sbjct: 917 QQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDD 976
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ + + + L+ + YGK+++A+V
Sbjct: 977 HQ-RELILSRIKVHLNALKKYTYGKHIVARV 1006
>gi|409082310|gb|EKM82668.1| hypothetical protein AGABI1DRAFT_53014, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 394
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 148/294 (50%), Gaps = 17/294 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID-DLHELMRHQSANHLIQKLI 300
++ G I+ + D+ G RF+Q K++ I ++ E++ +LM+ N++IQKL+
Sbjct: 91 DIVGHIVEFSTDQYGSRFIQTKLEGAGLDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLM 150
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++Q L V + ++ + ++ G RV+QK+++ T EQQ+ LV
Sbjct: 151 DFGTQDQRAGLARLV---ENEIVDLSLNVYGCRVVQKVIEL--------CTAEQQTQLVR 199
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
++ +++ K +GNHVI++ + P+ L + LA GC +LQ C+
Sbjct: 200 KIEPHVLTVVKDTNGNHVIQKFVMTVSPERLS-FLRTFRDAARQLAIHPYGCRVLQRCLE 258
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLG 480
+ +I ++ A L + +GNYVVQYIL P + AQ+ G +S
Sbjct: 259 YLPNDYCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRH 318
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ----LILDPYGNYVIQTAWD 530
K +SNVV+K L+ + E +++EI+ V L++D YGNYVIQTA +
Sbjct: 319 KFASNVVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTALN 372
>gi|444320890|ref|XP_004181101.1| hypothetical protein TBLA_0F00380 [Tetrapisispora blattae CBS 6284]
gi|387514145|emb|CCH61582.1| hypothetical protein TBLA_0F00380 [Tetrapisispora blattae CBS 6284]
Length = 784
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 169/347 (48%), Gaps = 47/347 (13%)
Query: 250 VAKDEQGCRFLQKKVDE--RNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+A+D+ GCRFLQKK++ +N + + + E+ L +L+ N+LIQKLI L+ Q
Sbjct: 66 LARDQYGCRFLQKKLESNGKNQLFKDQLFEELKPILLDLIMDPFGNYLIQKLIVYLDSNQ 125
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY--PTRQQLTQEQQSLLVSALKNI 365
+ L L+++ S I + G+R +QK++D+ + P Q LL+ K
Sbjct: 126 IIDL-LNLIHS--NFGAISSNQFGTRSLQKVIDSVDIDDPV-------QTELLLMGFKEY 175
Query: 366 T-----VSLSKSPHGNHVIKRCLQKFPPDYTK-DLLEE---IAENCLDLATDRSGCCLLQ 416
++L +GNHVI++ + KF D L + + N + ++T + GCC+LQ
Sbjct: 176 LSNDQLINLINDLNGNHVIQKLIFKFKDSILNLDFLIDSICLGTNIIKISTHKHGCCVLQ 235
Query: 417 YCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI---------PQVTADVV 467
+ L Q Q ++ +++N L + +GNY++Q+IL K ++ +
Sbjct: 236 KLLNLIQLSQFEKISIRILSNLIDLINNQFGNYIIQFILSKKFNCLEFQVIHEKILIEFY 295
Query: 468 AQLAGRYFALSLGKCSSNVVQ---KCLLESGEEQSTGII---NEIIRHPE-----IVQLI 516
L+ +++ LS K SSNV++ K L S II N II+ + + LI
Sbjct: 296 QNLSFQFYQLSCLKFSSNVIENYIKILFTSWTSSQDNIIQLSNIIIKIIDCFTINLNSLI 355
Query: 517 LDPYGNYVIQTAWDVSQGRRIRQT---LYDLVVDNSPFLQSHMYGKN 560
D YGNY +QT D+ Q + T Y+ V ++ PFL Y N
Sbjct: 356 KDNYGNYTLQTLLDIKQYSSLLATSNNKYN-VPNDFPFLNLFNYKIN 401
>gi|452846127|gb|EME48060.1| hypothetical protein DOTSEDRAFT_69859 [Dothistroma septosporum
NZE10]
Length = 945
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 26/313 (8%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
+ + + R Y I E G D+ G RF+Q K++ N + + + E+ + L
Sbjct: 524 KTKRYELRDIYDHIAEFSG-------DQHGSRFIQTKLETANSDEKDRVFREIEPNAIPL 576
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N++IQK M+ + Q ++ + + G RV+QK LD
Sbjct: 577 MTDVFGNYVIQKF---FEHGDMSHKKILAKKMQDQVYSLSKQMYGCRVVQKALD------ 627
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLA 406
+ EQQ LV+ LK + K +GNHVI++ +++ P ++E L+
Sbjct: 628 --HVLVEQQQQLVAELKGHVLDCVKDQNGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLS 685
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
GC ++Q C+ QK+ ++A+++ + + + +GNYVVQ+++ + + V
Sbjct: 686 IHAYGCRVIQRCLEKCDLPQKSMIMAELLQSIHTMISDQFGNYVVQHVVAHDEGECRSHV 745
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE--------IVQLILD 518
+ + S K +SNVV+KCL +S E ++ ++ + + IV +I D
Sbjct: 746 LDIVMNNLEGYSKHKFASNVVEKCLEKSDERWRHEVVVRLVNNSQRRIEGESPIVLMIKD 805
Query: 519 PYGNYVIQTAWDV 531
+GNYVIQ D
Sbjct: 806 NFGNYVIQKLLDT 818
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
+ D GSR +Q L+ + ++ +E + + + ++ GN+VI++
Sbjct: 537 IAEFSGDQHGSRFIQTKLETANSDEKDRVFREIEPNAIPLMTDV--------FGNYVIQK 588
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ + K L +++ + L+ GC ++Q + EQ+ +L+A++ +
Sbjct: 589 FFEHGDMSHKKILAKKMQDQVYSLSKQMYGCRVVQKALDHVLVEQQQQLVAELKGHVLDC 648
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ GN+V+Q + P A ++ G+ +LS+ V+Q+CL + Q +
Sbjct: 649 VKDQNGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLSIHAYGCRVIQRCLEKCDLPQKSM 708
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
I+ E+++ I +I D +GNYV+Q +G R + D+V++N H + NV
Sbjct: 709 IMAELLQ--SIHTMISDQFGNYVVQHVVAHDEGE-CRSHVLDIVMNNLEGYSKHKFASNV 765
Query: 562 LAK 564
+ K
Sbjct: 766 VEK 768
>gi|310789326|gb|EFQ24859.1| hypothetical protein GLRG_00003 [Glomerella graminicola M1.001]
Length = 821
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 149/292 (51%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G ++ + D+ G RF+Q+K++ N + + + E+ + +LM+ N++IQK
Sbjct: 430 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 489
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K++ S + +++ + + RV+QK L + + EQQ+ LV
Sbjct: 490 FEHGNQVQ-KKVLASQMKG--KVVDLSMQMYACRVVQKAL--------EHVLVEQQAELV 538
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + + K +GNHV+++ ++ P Y +++ LA C ++Q +
Sbjct: 539 KELEPEILKVVKDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRML 598
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
++ K ++A++ + VL YGNYVVQ+I+ + + ++ + + +S
Sbjct: 599 EYGTDQDKETILAELHNSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTMSK 658
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHP----EIVQLIL-DPYGNYVIQ 526
K +SNVV+KC+ E+ GI +II +QL++ D YGNYVIQ
Sbjct: 659 HKFASNVVEKCIQYGSAEERKGIREQIISQSADGTSSLQLMMKDQYGNYVIQ 710
>gi|299753403|ref|XP_001833252.2| pumilio [Coprinopsis cinerea okayama7#130]
gi|298410285|gb|EAU88525.2| pumilio [Coprinopsis cinerea okayama7#130]
Length = 461
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 155/300 (51%), Gaps = 18/300 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSANHLIQK 298
++++RG I ++D++ RF+Q+ +++ + +++I SEV DDL + + N+++QK
Sbjct: 113 LKDVRGHIAEFSRDQRASRFIQQVIEDADTDALDLIWSEVASDDLLTISFNACGNYVVQK 172
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ +E Q KL ++ Q ++++ D G V+QK+LD R Q+ E + +
Sbjct: 173 LLDRGSEAQRVKLATAL---QGHVVQVSQDAYGCWVIQKVLDVVPNHVRGQIVLEAEPHI 229
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
++L K P+GNHV+++ LQ P Y ++ +++A D GC +LQ C
Sbjct: 230 --------LTLVKDPNGNHVVQKILQVVPARYLT-FVDAFHGRAVEIARDNYGCRVLQRC 280
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ E L+ ++ + +GNYV+Q+IL ++ Q+ GR L+
Sbjct: 281 LQHLPFEAVQPLLQELKPFILEMICDQFGNYVIQHILQDGKTSEKEEIFHQIRGRVLRLA 340
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQ 533
K +SNV++K L + II E++ + + QL+ D YGNYV+Q A +++
Sbjct: 341 RHKYASNVLEKALTHAPPLIRHAIIEEMLTTVKGFPKGVWQLMNDQYGNYVLQKALTLAE 400
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 50/289 (17%)
Query: 276 LSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
L +V + E R Q A+ IQ++I + + + LI S V+S LL I + G+ V+
Sbjct: 113 LKDVRGHIAEFSRDQRASRFIQQVIEDADTDAL-DLIWSEVASDD-LLTISFNACGNYVV 170
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QKLLD G ++ Q+ L +AL+ V +S+
Sbjct: 171 QKLLDRG--------SEAQRVKLATALQGHVVQVSQ------------------------ 198
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
D GC ++Q + + + +++ + + L + GN+VVQ IL
Sbjct: 199 ------------DAYGCWVIQKVLDVVPNHVRGQIVLEAEPHILTLVKDPNGNHVVQKIL 246
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
+ +P V GR ++ V+Q+CL E ++ E+ P I+++
Sbjct: 247 QV-VPARYLTFVDAFHGRAVEIARDNYGCRVLQRCLQHLPFEAVQPLLQEL--KPFILEM 303
Query: 516 ILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
I D +GNYVIQ + ++ ++ + L H Y NVL K
Sbjct: 304 ICDQFGNYVIQHILQDGKTSE-KEEIFHQIRGRVLRLARHKYASNVLEK 351
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ GR + +A+D GCR LQ+ + ++ +L E+ + E++ Q N++IQ +
Sbjct: 257 VDAFHGRAVEIARDNYGCRVLQRCLQHLPFEAVQPLLQELKPFILEMICDQFGNYVIQHI 316
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + ++ + + R+LR+ S V++K L R + +E + +
Sbjct: 317 LQDGKTSEKEEIFHQI---RGRVLRLARHKYASNVLEKALTHAPPLIRHAIIEEMLTTVK 373
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLAT 407
K + L +GN+V+++ L L EE L +AT
Sbjct: 374 GFPKGVW-QLMNDQYGNYVLQKAL---------TLAEEPQRTVLSMAT 411
>gi|190407120|gb|EDV10387.1| suppressor protein MPT5 [Saccharomyces cerevisiae RM11-1a]
Length = 834
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 191 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 249
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 250 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 306
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 307 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 365
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 366 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 425
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 426 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 485
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 486 VLIRDNFGNYALQTLLDV 503
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 191 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 244
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 245 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 304
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 305 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 364
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 365 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 402
>gi|450490|dbj|BAA05172.1| suppressor protein [Saccharomyces cerevisiae]
gi|469512|dbj|BAA05024.1| HTR1 [Saccharomyces cerevisiae]
gi|1209471|emb|CAA58663.1| bic834 [Saccharomyces cerevisiae]
gi|392299572|gb|EIW10666.1| Mpt5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 834
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 191 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 249
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 250 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 306
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 307 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 365
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 366 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 425
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 426 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 485
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 486 VLIRDNFGNYALQTLLDV 503
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 191 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 244
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 245 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 304
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 305 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 364
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 365 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 402
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 167/316 (52%), Gaps = 15/316 (4%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ D+E +EV+ + LM N+++QK + EQ KL
Sbjct: 2 DQHGSRFIQQKLEGVAAEDLEAAFAEVLPRILHLMTDVFGNYVVQKFLEHGTPEQRLKLG 61
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
++ +L++ + G RV+QK L+ +P +E Q LV+ L + +
Sbjct: 62 RAL---HGHVLQLSLQMYGCRVVQKALET--FP------EEAQMELVTELDGHIMRCVRD 110
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE-EQKARLI 431
+GNHVI++C++ P +L+ + L+T GC ++Q + ++ +++ ++
Sbjct: 111 QNGNHVIQKCIECVPTHRIAAVLDNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVM 170
Query: 432 ADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCL 491
+D++A A L++ YGNYV+Q++L P+ A + A LA LS+ K +SNVV+KCL
Sbjct: 171 SDILAAAVQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCL 230
Query: 492 LESGEEQSTGIINEII-RHPEIVQLIL-DPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNS 549
+++ ++ H + VQ ++ D +GNYV+Q +V + R+ + V
Sbjct: 231 TYGSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVLEVCSDEQ-REVMLARVRQQL 289
Query: 550 PFLQSHMYGKNVLAKV 565
L+ + YGK+++A+V
Sbjct: 290 HALKRYTYGKHIVARV 305
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEM-ILSEVIDDLHELMRHQSANHLIQKLIG 301
L G ++ ++ GCR +QK + E P + +M +++E+ + +R Q+ NH+IQK I
Sbjct: 64 LHGHVLQLSLQMYGCRVVQKAL-ETFPEEAQMELVTELDGHIMRCVRDQNGNHVIQKCIE 122
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ ++ ++ + + ++ + G R++Q++L+ + R +S ++S
Sbjct: 123 CVPTHRIAAVLDNFLLC---VVPLSTHPFGCRIIQRILEHVKDARR-------RSAVMSD 172
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
+ V L++ +GN+VI+ L++ P+ + +A + + L+ + +++ C+
Sbjct: 173 ILAAAVQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCLTY 232
Query: 422 AQEEQKARLIADVVAN----AYVLSEHSYGNYVVQYIL 455
+ L++ ++ + + +GNYVVQ +L
Sbjct: 233 GSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVL 270
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ EL G I+ +D+ G +QK ++ I +L + + L H +IQ++
Sbjct: 97 VTELDGHIMRCVRDQNGNHVIQKCIECVPTHRIAAVLDNFLLCVVPLSTHPFGCRIIQRI 156
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ + + + ++S + + +++ D G+ V+Q +L+ G T E+++ +
Sbjct: 157 LEHVKDARRRSAVMSDILAAA--VQLTQDQYGNYVIQHVLERG--------TPEERASIA 206
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI-----AENCLDLATDRSGCCL 414
++L + V LS ++V+++CL + +DLL + + D+ G +
Sbjct: 207 ASLASSVVPLSMHKFASNVVEKCL-TYGSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYV 265
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
+Q + + +EQ+ ++A V + L ++YG ++V +
Sbjct: 266 VQKVLEVCSDEQREVMLARVRQQLHALKRYTYGKHIVARV 305
>gi|403372240|gb|EJY86013.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 933
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 64/327 (19%)
Query: 249 LVAKDEQGCRFLQKKVDER--NPIDI---EMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
L AKD+ GCR +QKK+D++ P E +L+ +ID +L++H AN+L QKLI
Sbjct: 598 LFAKDQNGCRRIQKKLDQQINTPSGAKFSEDLLNSLIDSFDDLIQHSFANYLCQKLIKTA 657
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
+ Q+ K+ LL++C D+
Sbjct: 658 QDYQVDKI----------LLKLCLDI---------------------------------- 673
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPD-YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
HGNHVI+ CL F + +++ + + + +NC +ATD+ GCC++Q + +
Sbjct: 674 ----------HGNHVIQICLDCFANEQFSQPIYQTVLQNCSRIATDKHGCCVVQKLLCTS 723
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+ ++ L+ + L YGNYV+Q +L + + + + ++ K
Sbjct: 724 KFCIQSELVKKSLEQIDSLINDQYGNYVIQQVLKFNDYLINIQICSYICTKFDYFCTQKI 783
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVS---QGRRIR 538
SSNVV+ + + E N + ++ + + L++D +GNYVIQ +S Q +
Sbjct: 784 SSNVVETAIRITSNECKRVFFNFLHKNVGVFKGLMMDQFGNYVIQAVLQMSCDFQDQTYY 843
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Y + ++N L+ +GK + K+
Sbjct: 844 DFFYKIFIENQEQLRKVNFGKKFIQKI 870
>gi|259146333|emb|CAY79590.1| Mpt5p [Saccharomyces cerevisiae EC1118]
gi|349578055|dbj|GAA23221.1| K7_Mpt5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 859
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 274
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 275 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 332 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 390
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 391 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 450
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 451 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 510
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 511 VLIRDNFGNYALQTLLDV 528
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 216 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 269
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 270 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 329
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 330 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 389
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 390 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 427
>gi|6321260|ref|NP_011337.1| Mpt5p [Saccharomyces cerevisiae S288c]
gi|116242633|sp|P39016.2|MPT5_YEAST RecName: Full=Suppressor protein MPT5; AltName: Full=Protein HTR1;
AltName: Full=Pumilio homology domain family member 5
gi|1322786|emb|CAA96889.1| MPT5 [Saccharomyces cerevisiae]
gi|285812036|tpg|DAA07936.1| TPA: Mpt5p [Saccharomyces cerevisiae S288c]
Length = 859
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 274
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 275 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 332 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 390
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 391 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 450
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 451 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 510
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 511 VLIRDNFGNYALQTLLDV 528
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 216 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 269
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 270 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 329
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 330 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 389
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 390 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 427
>gi|407038528|gb|EKE39174.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
nuttalli P19]
Length = 222
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCL 414
+L++ + + L +GNHVI+ CL+ F + + I N + +AT + GCC+
Sbjct: 1 MLINVISPYVIELIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCV 60
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q CI +Q LI ++V N+ VL + ++GNYVVQYIL + I V DV L
Sbjct: 61 VQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVIIDVTKMLLDDL 120
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVS 532
LS+ K SSNV++K + E I + ++ ++ +L+ D Y NYVIQT D S
Sbjct: 121 IDLSMQKFSSNVIEKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQS 178
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G ++ VA + GC +Q+ +D N + ++ E++ + L++ N+++Q ++ V
Sbjct: 46 GNLVKVATHKHGCCVVQRCIDYGNRQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNV-- 103
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++ ++ + LL DLS S V++KL+ + E RQ +
Sbjct: 104 -----DIVGVIIDVTKMLLDDLIDLSMQKFSSNVIEKLVRSDEIEARQMIFDR-----FL 153
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
+K++T L + + N+VI+ CL + +Y
Sbjct: 154 QIKDVT-KLLQDSYANYVIQTCLDQSSVEY 182
>gi|794145|emb|CAA58660.1| MPT5=HTR1 [Saccharomyces cerevisiae]
Length = 812
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 274
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 275 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 332 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 390
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 391 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 450
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 451 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 510
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 511 VLIRDNFGNYALQTLLDV 528
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 216 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 269
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 270 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 329
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 330 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 389
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 390 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 427
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L+ I+ ++D+ G RF+Q+K++ + ++ M+ +E++ + LM N++IQK
Sbjct: 677 LHDLQRHIVEFSQDQHGSRFIQQKLERASVLEKTMVFNEILSAAYSLMTDVFGNYVIQKF 736
Query: 300 IGVLNEEQMTKLILSVVSSQQRL----LRICDDLSGSRVMQKLLDA--GEYPTRQQLTQE 353
+ EQ KL+L+ QR+ L + + G RV+QK L+ E P +L +E
Sbjct: 737 FEFGSPEQ--KLLLA-----QRIKGHVLPLALQMYGCRVIQKALETIPSEIPIHGELVKE 789
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
L + K +GNHV+++C++ + +++ L+T GC
Sbjct: 790 --------LDGHVLKCVKDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCR 841
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q + +EQ A ++A++ + L + YGNYV+Q++L P+ + +V + G
Sbjct: 842 VIQRILEHCTQEQTAPILAELHEHTERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGN 901
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE 511
LS K +SNV++KC+ + ++ + +I+E+ +P+
Sbjct: 902 VLLLSQHKFASNVIEKCVTHASRQERSLLIDEVTNYPD 939
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 13/248 (5%)
Query: 319 QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHV 378
Q+ ++ D GSR +Q+ L+ + + +++++ + + + SL GN+V
Sbjct: 681 QRHIVEFSQDQHGSRFIQQKLE--------RASVLEKTMVFNEILSAAYSLMTDVFGNYV 732
Query: 379 IKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQ--KARLIADVVA 436
I++ + P+ L + I + L LA GC ++Q + E L+ ++
Sbjct: 733 IQKFFEFGSPEQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDG 792
Query: 437 NAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGE 496
+ + GN+VVQ + ++ G+ +ALS V+Q+ L +
Sbjct: 793 HVLKCVKDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQ 852
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
EQ+ I+ E+ H E +LI D YGNYVIQ + + T+ ++V N L H
Sbjct: 853 EQTAPILAELHEHTE--RLIQDQYGNYVIQHVLEHGSPED-KSTIVNIVRGNVLLLSQHK 909
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 910 FASNVIEK 917
>gi|151943637|gb|EDN61947.1| multicopy suppressor of pop two [Saccharomyces cerevisiae YJM789]
Length = 859
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 274
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 275 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 332 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 390
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 391 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 450
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 451 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 510
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 511 VLIRDNFGNYALQTLLDV 528
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 216 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 269
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 270 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 329
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 330 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 389
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 390 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 427
>gi|171686492|ref|XP_001908187.1| hypothetical protein [Podospora anserina S mat+]
gi|170943207|emb|CAP68860.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 22/345 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q K++ N D + E+ + LM+ N++IQK
Sbjct: 354 LKDIYGFIVEFSGDQHGSRFIQNKLETANSDDKNQVFHEIEPNAIVLMKDLFGNYVIQKF 413
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L ++ + +++ + + RV+QK L + EQQ+ LV
Sbjct: 414 FEHGNQAQKQVLAAAM---KGKVVELSMQMYACRVVQKAL--------SHVLVEQQAELV 462
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ +++ K +GNHV+++ +Q P + + + +L++ GC ++Q +
Sbjct: 463 KELEPEILTIVKDQNGNHVVQKIIQTVPRQHIGFIFDCFRGRVSELSSHAYGCRVIQRAL 522
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E K ++ ++ + A +L YGNYV Q+++ P + +VA + + S
Sbjct: 523 EHGNEADKQSIMKELHSCAQMLIMDQYGNYVTQHVITDGSPDDRSKMVALVMSQLPIFSK 582
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ +Q I + + + +V L D +GNYV+QT QG
Sbjct: 583 HKFASNVVEKCIKHGTADQQRDIRDRFMSRGDDGNSFLVSLTKDQFGNYVLQTLLSELQG 642
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVAMW 579
Q LV + P L S K K +R HN + +
Sbjct: 643 ----QDRDVLVNEVRPLLAS--IKKMCTGKQIAGVDRLHNAITSY 681
>gi|323337538|gb|EGA78783.1| Mpt5p [Saccharomyces cerevisiae Vin13]
Length = 777
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 132 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 190
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 191 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 247
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 248 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 306
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 307 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 366
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 367 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 426
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 427 VLIRDNFGNYALQTLLDV 444
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 132 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 185
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 186 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 245
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 246 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 305
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 306 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 343
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 174/363 (47%), Gaps = 34/363 (9%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + + M+ +E++ LM
Sbjct: 684 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFG 743
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QK EQ+ +L + +L + + G RV+QK + + ++
Sbjct: 744 NYVVQKFFEHGTAEQIRELADQLTG---HVLTLSLQMYGCRVIQKQSHYAKGARKYEVVG 800
Query: 353 -------------------------EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFP 387
+Q++ +V+ L + + +GNHVI++C++ P
Sbjct: 801 RPDGFPRLLIFFSFYIVQAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVP 860
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSY 446
D K ++ + + L+T GC ++Q + + + +++ D ++ +L++ Y
Sbjct: 861 EDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQY 920
Query: 447 GNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
GNYVVQ++L P ++ + G+ +S K +SNV++KCL + ++NE+
Sbjct: 921 GNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEM 980
Query: 507 IRHP---EIVQLIL-DPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
I E +Q+++ D + NYV+Q + +++ L + V + L+ + YGK+++
Sbjct: 981 IGSTDDNEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNA-LKKYTYGKHIV 1039
Query: 563 AKV 565
A+V
Sbjct: 1040 ARV 1042
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 51/261 (19%)
Query: 350 LTQEQQSL-LVSALKNITVSLSKSPHGNHVIK-------RCLQKFPPDYTKDL-LEEIAE 400
++Q ++++ L + ++N+ + + H + V L +F + TK L EIA
Sbjct: 637 MSQSERNMRLAAGMRNVAGVFTGAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELSEIAG 696
Query: 401 NCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIP 460
+ ++ + D+ G +Q + A E+K + +++ A L +GNYVVQ
Sbjct: 697 HVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTA 756
Query: 461 QVTADVVAQLAGRYFALSLGKCSSNVVQK-----------------------------CL 491
+ ++ QL G LSL V+QK +
Sbjct: 757 EQIRELADQLTGHVLTLSLQMYGCRVIQKQSHYAKGARKYEVVGRPDGFPRLLIFFSFYI 816
Query: 492 LESGE----EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV---SQGRRIRQTLYDL 544
+++ E +Q T ++ E+ H I++ + D GN+VIQ + + + I T YD
Sbjct: 817 VQAIEVVNLDQKTKMVTELDGH--IMRCVRDQNGNHVIQKCIECVPEDEIKFIVSTFYDQ 874
Query: 545 VVDNSPFLQSHMYGKNVLAKV 565
VV L +H YG V+ +V
Sbjct: 875 VVT----LSTHPYGCRVIQRV 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 420 PLAQEEQKARLIADV--VANAYVLSEHSYG------NYVVQYILGLKIPQVTADVVAQLA 471
P++Q E+ RL A + VA + + HS N+ + K + ++++A
Sbjct: 636 PMSQSERNMRLAAGMRNVAGVFTGAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELSEIA 695
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDV 531
G S + S +Q+ L + E+ T + NEI+ P+ + L+ D +GNYV+Q ++
Sbjct: 696 GHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIM--PKALTLMTDVFGNYVVQKFFEH 753
Query: 532 SQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
+IR+ L D + + L MYG V+ K
Sbjct: 754 GTAEQIRE-LADQLTGHVLTLSLQMYGCRVIQK 785
>gi|403344427|gb|EJY71557.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 933
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 64/327 (19%)
Query: 249 LVAKDEQGCRFLQKKVDER--NPIDI---EMILSEVIDDLHELMRHQSANHLIQKLIGVL 303
L AKD+ GCR +QKK+D++ P E +L+ +ID +L++H AN+L QKLI
Sbjct: 598 LFAKDQNGCRRIQKKLDQQINTPSGAKFSEDLLNSLIDSFDDLIQHSFANYLCQKLIKSA 657
Query: 304 NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK 363
+ Q+ K+ LL++C D+
Sbjct: 658 QDYQVDKI----------LLKLCLDI---------------------------------- 673
Query: 364 NITVSLSKSPHGNHVIKRCLQKFPPD-YTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
HGNHVI+ CL F + +++ + + + +NC +ATD+ GCC++Q + +
Sbjct: 674 ----------HGNHVIQICLDCFANEQFSQPIYQTVLQNCSRIATDKHGCCVVQKLLCTS 723
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
+ ++ L+ + L YGNYV+Q +L + + + + ++ K
Sbjct: 724 KFCIQSELVKKSLEQIDSLINDQYGNYVIQQVLKFNDYLINIQICSYICTKFDYFCTQKI 783
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVS---QGRRIR 538
SSNVV+ + + E N + ++ + + L++D +GNYVIQ +S Q +
Sbjct: 784 SSNVVETAIRITSNECKRVFFNFLHKNVGVFKGLMMDQFGNYVIQAVLQMSCDFQDQTYY 843
Query: 539 QTLYDLVVDNSPFLQSHMYGKNVLAKV 565
Y + ++N L+ +GK + K+
Sbjct: 844 DFFYKIFIENQEQLRKVNFGKKFIQKI 870
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 161/332 (48%), Gaps = 23/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + ++ + + G RV+QK L + + +QQ+ LV
Sbjct: 617 FEHGNQVQKRVLAEQM---KNHVMELSMQMYGCRVVQKAL--------EHVLADQQAELV 665
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHV+++ +++ P ++ + ++E LAT GC ++Q +
Sbjct: 666 KELEADVLKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRIL 725
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
Q + R++ ++ A L YGNYV Q+++ P+ A +V + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSK 785
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNVV+K + +EQ I++ + +QL++ D YGNYVIQ +G
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
Query: 535 RRIRQTLYDLVVDNSP---FLQSHMYGKNVLA 563
+ DL P L+ + YGK + A
Sbjct: 846 AERNAFVEDL----KPQLLALKKYNYGKQIAA 873
>gi|207345480|gb|EDZ72291.1| YGL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 746
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 39/318 (12%)
Query: 248 ILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
I +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+QKL L
Sbjct: 103 IKLATDQFGCRFLQKKLETPSESNMVR-DLMYEQIKPFFLDLILDPFGNYLVQKLCDYLT 161
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
EQ T LI ++ + + +I + G+R +QK++D + + L + S ++++
Sbjct: 162 AEQKTLLIQTIYPN---VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 218
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLA 422
+ V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ + +
Sbjct: 219 V-VTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC 277
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLG 480
+Q ++ +V L +GNY++Q++L +K + A++ +L+ LS
Sbjct: 278 TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCL 337
Query: 481 KCSSNVVQKCLLE-------------SGEEQSTGI---------INEIIRHPEIVQ---- 514
K SSNVV+K + + G Q T + +N ++ +I
Sbjct: 338 KFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLN 397
Query: 515 -LILDPYGNYVIQTAWDV 531
LI D +GNY +QT DV
Sbjct: 398 VLIRDNFGNYALQTLLDV 415
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P+ + ++ L+ +K + L P GN+++++
Sbjct: 103 IKLATDQFGCRFLQKKL---ETPSESNMVRD---LMYEQIKPFFLDLILDPFGNYLVQKL 156
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ L++ I N ++ ++ G LQ I E + LI + +
Sbjct: 157 CDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSI 216
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLA--GRYFALSLGKCSSNVVQKCLLE 493
E GN+V+Q + P ++ + +S K V+QK L
Sbjct: 217 EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSV 276
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 277 CTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 314
>gi|449547439|gb|EMD38407.1| hypothetical protein CERSUDRAFT_82658 [Ceriporiopsis subvermispora
B]
Length = 414
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 159/310 (51%), Gaps = 21/310 (6%)
Query: 234 RTSYSSIEELR---GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRH 289
R + S ELR G ++ + D+ G RF+Q+K++ N + +++ E++ + +L++
Sbjct: 57 RANKSRKWELRDIFGYVVEFSGDQHGSRFIQQKLETANSEEKQIVFDEIVPHNALQLIQD 116
Query: 290 QSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
N+++QKL + Q T L ++ + +L + + G RV+QK A EY
Sbjct: 117 VFGNYVVQKLFEHGTQVQKTMLANAM---EGHVLPLSLQMYGCRVVQK---AVEY----- 165
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+ EQQS V L + K +GNHV+++ +++ P+ ++ N +L+T
Sbjct: 166 VLPEQQSAFVKELDVNVLRCVKDANGNHVVQKLIERVAPERLT-FVQAFRGNVYELSTHP 224
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GC +LQ C EEQ L+ ++ L + +GNYVVQ++L P A ++++
Sbjct: 225 YGCRVLQRCFEHLPEEQTRPLLDELHKYIINLMQDQFGNYVVQFVLEHGTPHDRAVIISK 284
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII--RH---PEIVQLILDPYGNYV 524
L G+ ++ K +SNV +K L+ + E +I EI+ +H I+ ++ D + NYV
Sbjct: 285 LRGQMLNMARHKFASNVCEKALITAESESRRLLIEEIMTPKHDGVSPILAMMKDQFANYV 344
Query: 525 IQTAWDVSQG 534
+Q A V +G
Sbjct: 345 LQRALSVVEG 354
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 161/332 (48%), Gaps = 23/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + ++ + + G RV+QK L + + +QQ+ LV
Sbjct: 617 FEHGNQVQKRVLAEQM---KNHVMELSMQMYGCRVVQKAL--------EHVLADQQAELV 665
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHV+++ +++ P ++ + ++E LAT GC ++Q +
Sbjct: 666 KELEADVLKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRIL 725
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
Q + R++ ++ A L YGNYV Q+++ P+ A +V + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSK 785
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNVV+K + +EQ I++ + +QL++ D YGNYVIQ +G
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
Query: 535 RRIRQTLYDLVVDNSP---FLQSHMYGKNVLA 563
+ DL P L+ + YGK + A
Sbjct: 846 AERNAFVEDL----KPQLLALKKYNYGKQIAA 873
>gi|331214059|ref|XP_003319711.1| hypothetical protein PGTG_01885 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298701|gb|EFP75292.1| hypothetical protein PGTG_01885 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 807
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ A D+ G R +Q K+D P + ++ E+ + +L AN+++QK
Sbjct: 442 LKDMTGLIVEFAGDQLGSRHIQSKLDTATPEEKTIVFEEIYPHVLQLSMDVFANYVVQKF 501
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+E Q KL S+ + +L++ + G RV+QK L+ + P QQ LL+
Sbjct: 502 FEQGSEAQKAKLAESL---RGHVLQLSLQMYGCRVIQKALEFIQVP--------QQHLLI 550
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + +K + NHV++R L++ + + + LAT GC +LQ
Sbjct: 551 KELEGEVIQCAKDQNANHVLQRSLERIDCNVNLFISKAFTGQAFALATHPYGCRVLQKVF 610
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EQ L+ ++ + L YGNYV Q+I+ + A ++A++ G+ LS
Sbjct: 611 EHMPDEQTKPLLEELHRFSNNLMTDQYGNYVAQWIITDGKKEDAAAMLAKVQGQVLLLSK 670
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQ 526
K +SNVV+K +L+S +++ +I+EI+ V ++L D + N+ +Q
Sbjct: 671 HKFASNVVEKAILKSTDDEKKEMIDEILAPRTDGTSTVGIMLKDAFANFPLQ 722
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 13/245 (5%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D GSR +Q LD T E+++++ + + LS N+V+++
Sbjct: 449 IVEFAGDQLGSRHIQSKLDTA--------TPEEKTIVFEEIYPHVLQLSMDVFANYVVQK 500
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
++ L E + + L L+ GC ++Q + Q Q+ LI ++
Sbjct: 501 FFEQGSEAQKAKLAESLRGHVLQLSLQMYGCRVIQKALEFIQVPQQHLLIKELEGEVIQC 560
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
++ N+V+Q L V + G+ FAL+ V+QK +EQ+
Sbjct: 561 AKDQNANHVLQRSLERIDCNVNLFISKAFTGQAFALATHPYGCRVLQKVFEHMPDEQTKP 620
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRR-IRQTLYDLVVDNSPFLQSHMYGKN 560
++ E+ R L+ D YGNYV Q W ++ G++ + V L H + N
Sbjct: 621 LLEELHRFSN--NLMTDQYGNYVAQ--WIITDGKKEDAAAMLAKVQGQVLLLSKHKFASN 676
Query: 561 VLAKV 565
V+ K
Sbjct: 677 VVEKA 681
>gi|367015240|ref|XP_003682119.1| hypothetical protein TDEL_0F00970 [Torulaspora delbrueckii]
gi|359749781|emb|CCE92908.1| hypothetical protein TDEL_0F00970 [Torulaspora delbrueckii]
Length = 762
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 46/333 (13%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDI--EMILSEVIDDLHELMRHQSANHLIQ 297
+EEL + +A D+ GCRFLQKK++ +I +++ ++ +L+ N+LIQ
Sbjct: 131 LEELD--YVKLATDQFGCRFLQKKLESPTESNIVRDLMYDQIKPFFLDLILDSFGNYLIQ 188
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL-----TQ 352
KL L EQ T LI S+ + L +I + G+R +QK++D + + L +Q
Sbjct: 189 KLCEYLTVEQKTVLIQSIYPN---LFQISINQYGTRSLQKIIDTMDNENQIDLIIKGFSQ 245
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRS 410
E S+ + V+L +GNHVI++C+ KFPP +++ I + N + ++T +
Sbjct: 246 EHTSI------DQVVTLINDLNGNHVIQKCIFKFPPSKFSFIIDAIVDQNNIITISTHKH 299
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVA 468
GCC+LQ + + +Q ++ ++ L +GNY++Q++L +K + ++
Sbjct: 300 GCCVLQKLLSVCTLQQIFKISVKIIQFLPGLINDQFGNYIIQFLLDIKELDFYLLGEIFN 359
Query: 469 QLAGRYFALSLGKCSSNVVQKCLL---------------ESGEEQSTGIINEIIRHPEIV 513
+L+ LS K SSNVV+K + + + + +++ ++R +
Sbjct: 360 RLSNELCQLSCLKFSSNVVEKYIKKLFRVIMAAVPKNKHDVASDINDDVVSAVMRILLTI 419
Query: 514 ---------QLILDPYGNYVIQTAWDVSQGRRI 537
LI D +GNY +QT DV +I
Sbjct: 420 IDIFTLNLNVLIRDNFGNYALQTLLDVKNYSQI 452
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 142/275 (51%), Gaps = 12/275 (4%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+T + ++ G ++ + D+ G RF+Q+K++ D M+ EV+ LM N
Sbjct: 793 KTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGN 852
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK +Q +L + + ++L + + G RV+QK L+ + +
Sbjct: 853 YVIQKFFEHGTHQQRRELASKL---EGQVLVLSLQMYGCRVIQKALEV--------VDVD 901
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
QQ+ LVS L + + +GNHVI++C++ PP ++ + L+T GC
Sbjct: 902 QQTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCR 961
Query: 414 LLQYCIPLAQEEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAG 472
++Q + +EQK + ++ +++ + L++ YGNYVVQ++L ++++ +LAG
Sbjct: 962 VIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAG 1021
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
+ +S K +SNVV+KCL G + +I+E++
Sbjct: 1022 QIVQMSQHKFASNVVEKCLEYGGPVERQILIDEML 1056
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 224 FYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDL 283
F+ H R S +E G++++++ GCR +QK ++ + ++SE+ ++
Sbjct: 858 FFEHGTHQQRRELASKLE---GQVLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNV 914
Query: 284 HELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE 343
+R Q+ NH+IQK I + ++ I+S +Q ++ + G RV+Q++L E
Sbjct: 915 MRCVRDQNGNHVIQKCIECVPPAKI-HFIISAFYNQ--VVTLSTHPYGCRVIQRVL---E 968
Query: 344 YPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCL 403
+ T + Q+Q+ ++ L++ T +L++ +GN+V++ L+ +++ ++A +
Sbjct: 969 HCTDE---QKQKGIMEEILRS-TCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIV 1024
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVA 436
++ + +++ C+ ++ LI +++
Sbjct: 1025 QMSQHKFASNVVEKCLEYGGPVERQILIDEMLG 1057
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 383 LQKFPPDYTKDL-LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
L++F T+ L +IA + ++ + D+ G +Q + A E K + +V+ A VL
Sbjct: 786 LEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVL 845
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+GNYV+Q Q ++ ++L G+ LSL V+QK L +Q T
Sbjct: 846 MTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMYGCRVIQKALEVVDVDQQTQ 905
Query: 502 IINEI-------IR---------------------------HPEIVQLILDPYGNYVIQT 527
+++E+ +R + ++V L PYG VIQ
Sbjct: 906 LVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQR 965
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ + ++ + + ++ ++ L YG V+ V
Sbjct: 966 VLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHV 1003
>gi|429848383|gb|ELA23874.1| mRNA binding protein pumilio [Colletotrichum gloeosporioides Nara
gc5]
Length = 853
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 151/302 (50%), Gaps = 20/302 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + + + E+ + +LM+ N++IQK
Sbjct: 463 LKDIYSHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 522
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
E ++ V++SQ + ++ + + RV+QK L+ + EQQ+
Sbjct: 523 F-----EHGNQVQKKVLASQMKGKVVDLSMQMYACRVVQKALE--------HVLVEQQAE 569
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
LV L+ V + K +GNHV+++ ++ P Y +++ LA+ C ++Q
Sbjct: 570 LVKELEPEIVKVVKDQNGNHVVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQR 629
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ E+ K ++ ++ + L YGNYVVQ+I+ P+ + ++ + + L
Sbjct: 630 MLEYGTEQDKETILGELHNSTQSLITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQLVTL 689
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP----EIVQLIL-DPYGNYVIQTAWDVS 532
S K +SNVV+KC+ E+ GI +I +QL++ D YGNYVIQ ++
Sbjct: 690 SKHKFASNVVEKCIQFGTAEERKGIREQITSQASDGTSSLQLMMKDQYGNYVIQKLLNLI 749
Query: 533 QG 534
+G
Sbjct: 750 EG 751
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 162/332 (48%), Gaps = 21/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 510 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKL 569
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 570 FEHGNQTQ--KKILAN-QMKGHILSLSTQMYGCRVVQKALE--------HILTDQQASMV 618
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + + +GNHVI++ +++ P Y + ++ LAT GC ++Q +
Sbjct: 619 KELESHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRML 678
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++ ++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 679 EHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSK 738
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q +I+ + E ++ L+ D YGNYVIQ + Q
Sbjct: 739 HKFASNVVEKSIEYGEESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKI--LGQL 796
Query: 535 RRIRQTLYDLVVDNSPF---LQSHMYGKNVLA 563
+ Y L V P L+ YGK ++A
Sbjct: 797 DDTSEEKYSLAVRIQPMLDQLKKFSYGKQIVA 828
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 56/193 (29%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 616 SMVKELESHVLRCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVDRLATHPYGCRVI 674
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL E+ +L+ Q N++IQ +I ++ +++I+ V+S
Sbjct: 675 QRMLEHCEEVDRESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS--- 731
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT-------VSLSKSP 373
+LL S V++K ++ GE R+Q ++S L ++ +SL +
Sbjct: 732 QLLTYSKHKFASNVVEKSIEYGEESQRRQ--------MISTLTSVNERGDSPLISLMRDQ 783
Query: 374 HGNHVIKRCLQKF 386
+GN+VI++ L +
Sbjct: 784 YGNYVIQKILGQL 796
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 170/342 (49%), Gaps = 25/342 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 708 NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFG 767
Query: 293 NHLIQKLI--GVLNE--EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QK G+ ++ E KL+ V L + + G RV+QK ++ + +
Sbjct: 768 NYVVQKFFEHGLASQRRELANKLLGHV-------LTLSLQMYGCRVIQKAIEVVDLDQKI 820
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
++ QE L + + +GNHVI++C++ P D ++ + + L+T
Sbjct: 821 EMVQE--------LDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTH 872
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAY-VLSEHSYGNYVVQYILGLKIPQVTADVV 467
GC ++Q + ++ + + D + A +L++ YGNYVVQ++L P + ++
Sbjct: 873 PYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSII 932
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNY 523
+LA + +S K +SNVV+KCL G + ++++++ + + ++ D + NY
Sbjct: 933 KELADKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQFANY 992
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q + ++ R+ + + + L+ + YGK+++++V
Sbjct: 993 VVQKVLETCDDQQ-RELILSRIKVHLNALKKYTYGKHIVSRV 1033
>gi|242069543|ref|XP_002450048.1| hypothetical protein SORBIDRAFT_05g027503 [Sorghum bicolor]
gi|241935891|gb|EES09036.1| hypothetical protein SORBIDRAFT_05g027503 [Sorghum bicolor]
Length = 341
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 164/330 (49%), Gaps = 19/330 (5%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
++G++ D G RF+Q+ + P +I M+ E++ + L NH +QK++
Sbjct: 17 IKGQVAASCADANGSRFVQQAIQVATPQEIVMVYEEIMPCVRTLAADVFGNHAVQKILEH 76
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
+ +LI ++ +L + D+ G RV+QK LD GE+ Q+ ++V L
Sbjct: 77 GPQSCKRELISRLMG---HVLPLSHDMYGCRVIQKALDVGEH--------NQKIVIVKEL 125
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
K+ + + +HVI++C++ PP + + + L+ G ++Q +
Sbjct: 126 KHKVLKCVRDQFASHVIQKCVECLPPKHIQFIFRSFCGWAKALSMHPYGSRVIQKVLAHC 185
Query: 423 QEEQKAR-LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
+ L A+++ A LS +GNYVVQ++L + +V + R +L K
Sbjct: 186 DNAEVCHTLTAEIIEFANKLSADPFGNYVVQHLLEHGGQTQRSMIVRKFDRRVVSLCYHK 245
Query: 482 CSSNVVQKCLLESGEEQSTGIINEII-----RHPE-IVQLILDPYGNYVIQTAWDVSQGR 535
+SNV++KCL+ +E IINEI+ +H E +V ++++PY N+VIQ ++ +
Sbjct: 246 FASNVLEKCLVFGSQEDRQLIINEILGNAGSQHVEHLVDMMINPYANFVIQKMVVTAEEQ 305
Query: 536 RIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
++ L D+ N+ L+ + +G++ +A +
Sbjct: 306 QV-GLLLDVARKNADSLKRYPHGRHFIAAI 334
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 22/226 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
I L G ++ ++ D GCR +QK +D +I+ E+ + + +R Q A+H+IQK
Sbjct: 86 ISRLMGHVLPLSHDMYGCRVIQKALDVGEHNQKIVIVKELKHKVLKCVRDQFASHVIQKC 145
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ L + + + S + L GSRV+QK+L + E L
Sbjct: 146 VECLPPKHIQFIFRSFCGWAKALSM---HPYGSRVIQKVLAHCD-------NAEVCHTLT 195
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ + LS P GN+V++ L+ ++ + + L + +L+ C+
Sbjct: 196 AEIIEFANKLSADPFGNYVVQHLLEHGGQTQRSMIVRKFDRRVVSLCYHKFASNVLEKCL 255
Query: 420 PLAQEEQKARLIADVVANAYVLSEHS----------YGNYVVQYIL 455
+E + +I +++ NA S+H Y N+V+Q ++
Sbjct: 256 VFGSQEDRQLIINEILGNAG--SQHVEHLVDMMINPYANFVIQKMV 299
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 20/231 (8%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
H ++EL+ +++ +D+ +QK V+ P I+ I L H
Sbjct: 115 HNQKIVIVKELKHKVLKCVRDQFASHVIQKCVECLPPKHIQFIFRSFCGWAKALSMHPYG 174
Query: 293 NHLIQKLIG-VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
+ +IQK++ N E L ++ +L D G+ V+Q LL+ G
Sbjct: 175 SRVIQKVLAHCDNAEVCHTLTAEIIEFANKL---SADPFGNYVVQHLLEHG--------G 223
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--------AENCL 403
Q Q+S++V VSL ++V+++CL + + ++ EI E+ +
Sbjct: 224 QTQRSMIVRKFDRRVVSLCYHKFASNVLEKCLVFGSQEDRQLIINEILGNAGSQHVEHLV 283
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
D+ + ++Q + A+E+Q L+ NA L + +G + + I
Sbjct: 284 DMMINPYANFVIQKMVVTAEEQQVGLLLDVARKNADSLKRYPHGRHFIAAI 334
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 159/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 489 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 548
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 549 FEHGNQSQKKILANQM---KGHVLALSTQMYGCRVVQKAL--------EHILTDQQASMV 597
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LA GC ++Q +
Sbjct: 598 KELENHVLKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRML 657
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++A++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 658 EHCEEVDRESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSK 717
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q II+ + E ++ L+ D YGNYVIQ +G
Sbjct: 718 HKFASNVVEKSIEFGEESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKG 777
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R+ L D + L+ YGK ++A
Sbjct: 778 EE-REALIDQIRPLLSQLKKFSYGKQIVA 805
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 48/201 (23%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 595 SMVKELENHVLKCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVSRLAAHPYGCRVI 653
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL+E+ L+ Q N++IQ +I E+ +++I V+S
Sbjct: 654 QRMLEHCEEVDRESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLS--- 710
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA---LKNITVSLSKSPHGNH 377
+LL S V++K ++ GE R+Q+ S L SA ++ + L + +GN+
Sbjct: 711 QLLMYSKHKFASNVVEKSIEFGEESQRRQII----STLTSANERGESPLLGLMRDQYGNY 766
Query: 378 VIKRCLQKFPPDYTKDLLEEI 398
VI++ L + + + L+++I
Sbjct: 767 VIQKVLGQLKGEEREALIDQI 787
>gi|367000888|ref|XP_003685179.1| hypothetical protein TPHA_0D01040 [Tetrapisispora phaffii CBS 4417]
gi|357523477|emb|CCE62745.1| hypothetical protein TPHA_0D01040 [Tetrapisispora phaffii CBS 4417]
Length = 797
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 58/333 (17%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDI----EMILSEVIDDLHELMRHQSANHL 295
+EEL + ++ D+ GCRFLQKK++++N D +++ + D +L+ N+L
Sbjct: 232 LEELD--FLSLSTDQYGCRFLQKKLEDKNINDSNKVRDLLFDQTRDHFLDLILDPFGNYL 289
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGE-----------Y 344
+QKL L +Q T LI ++ ++ + +I + G+R +QK++D E +
Sbjct: 290 VQKLCYYLTTDQKTILIQAIYTN---MYQISINQYGTRSLQKIIDVAEEDYQIDMIIDGF 346
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--AENC 402
R+ ++ +Q +++ L +GNHVI++C+ KF P L++ I N
Sbjct: 347 SNREYISTDQVVKIINDL-----------NGNHVIQKCIFKFQPSKLNFLIDVINTGNNI 395
Query: 403 LDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG---LKI 459
+ ++T + GCC+LQ + + + +Q ++ +++ L +GNY+VQ++L LK
Sbjct: 396 VHISTHKHGCCVLQKLLGICKLQQTLKISMNIIEYLPKLINDQFGNYIVQFLLDTDELKF 455
Query: 460 PQVTADVVAQLAGRYFALSLGKCSSNVVQKCL------LESGEEQSTGIINEIIRHPEIV 513
+ +L+ LS K SSNV++K + + S I N+ P ++
Sbjct: 456 -YFLPETYKKLSNNLPQLSCMKFSSNVIEKIIKILYVVITKSANCSNVIPNQDDLVPNVM 514
Query: 514 Q---------------LILDPYGNYVIQTAWDV 531
+ LI D YGNY +QT DV
Sbjct: 515 EILISIIEIFTANLNVLIRDNYGNYTLQTLLDV 547
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 162/330 (49%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 487 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 546
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 547 FEHGNQSQ--KKILAN-QMKGHVLALSTQMYGCRVVQKALE--------HILTDQQASMV 595
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LA GC ++Q +
Sbjct: 596 KELENHVLKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRML 655
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EE + ++A++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 656 EHCEEEDRESILAELHACTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLVYSK 715
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K +E GEE I + P ++ L+ D YGNYVIQ +
Sbjct: 716 HKFASNVVEKS-IEFGEESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLK 774
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + + L+ YGK ++A
Sbjct: 775 GEE-REGLIEQIRPLLSQLKKFSYGKQIVA 803
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
S ++EL ++ +D+ G +QK + ER P ++ I++ ++ L H +I
Sbjct: 593 SMVKELENHVLKCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVNRLAAHPYGCRVI 651
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
Q+++ EE ++ + + L+ D G+ V+Q +++ GE R ++ +
Sbjct: 652 QRMLEHCEEEDRESILAELHACTTHLI---PDQFGNYVIQHVIENGEEKDRSRMI----T 704
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA-------ENCLDLATDR 409
+++S L + SK ++V+++ ++ + ++ + L L D+
Sbjct: 705 IVLSQL----LVYSKHKFASNVVEKSIEFGEESQRRQIISTLTSPNDRGESPLLGLMRDQ 760
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
G ++Q + + E++ LI + L + SYG +V
Sbjct: 761 YGNYVIQKVLGQLKGEEREGLIEQIRPLLSQLKKFSYGKQIV 802
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 148/299 (49%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + E+I +E+ D ELM N++IQK
Sbjct: 465 LKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKY 524
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L+ + + + + + G RV+Q+ L+A + QQ L++
Sbjct: 525 FEHGNDVQKEVLLDCM---KGHIYTLSMQMYGCRVVQRALEA--------IKVHQQILII 573
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
LK+ + +K +GNHVI++ ++K P K +LE + L+T GC ++Q +
Sbjct: 574 EELKDHILVCAKDQNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLL 633
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ + + +++ ++ + L + YGNYV+Q+IL + +++ + G S
Sbjct: 634 EFSSPDDQRKILNELNRFIFYLIQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSK 693
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ EQ I+ E++ E + ++ D Y NYVIQ
Sbjct: 694 HKFASNVIEKCIKYGDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQ 752
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 23/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + ++ + + G RV+QK L+ + +QQ+ LV
Sbjct: 617 FEHGNQVQKRVLAEQM---KNHVMELSMQMYGCRVVQKALE--------HVLADQQAELV 665
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + K +GNHV+++ +++ P ++ + ++E LAT GC ++Q +
Sbjct: 666 KELEADVLKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHILATHPYGCRVIQRIL 725
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
Q + R++ ++ A L YGNYV Q+++ P+ A ++ + + LS
Sbjct: 726 EYCQPRDQERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSK 785
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNVV+K + +EQ I++ + +QL++ D YGNYVIQ +G
Sbjct: 786 HKFASNVVEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKG 845
Query: 535 RRIRQTLYDLVVDNSP---FLQSHMYGKNVLA 563
+ DL P L+ + YGK + A
Sbjct: 846 AERAAFVEDL----KPQLLALKKYNYGKQIAA 873
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 159/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 489 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 548
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 549 FEHGNQSQKKILANQM---KGHVLALSTQMYGCRVVQKAL--------EHILTDQQASMV 597
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + + +GNHVI++ +++ P Y + ++ LA GC ++Q +
Sbjct: 598 KELENHVLKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRML 657
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+E + ++A++ A L +GNYV+Q+++ + + ++ + + S
Sbjct: 658 EHCEEVDRESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSK 717
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q II+ + E ++ L+ D YGNYVIQ +G
Sbjct: 718 HKFASNVVEKSIEFGEESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKG 777
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R+ L D + L+ YGK ++A
Sbjct: 778 EE-REGLIDQIRPLLSQLKKFSYGKQIVA 805
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 48/201 (23%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNP---------------------------- 269
S ++EL ++ +D+ G +QK + ER P
Sbjct: 595 SMVKELENHVLKCVRDQNGNHVIQKAI-ERVPSQYVQFIINAFKGQVSRLAAHPYGCRVI 653
Query: 270 ---------IDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQ 320
+D E IL+E+ L+ Q N++IQ +I E+ +++I V+S
Sbjct: 654 QRMLEHCEEVDRESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLS--- 710
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA---LKNITVSLSKSPHGNH 377
+LL S V++K ++ GE RQQ+ S L SA ++ + L + +GN+
Sbjct: 711 QLLMYSKHKFASNVVEKSIEFGEESQRQQII----STLTSANERGESPLLGLMRDQYGNY 766
Query: 378 VIKRCLQKFPPDYTKDLLEEI 398
VI++ L + + + L+++I
Sbjct: 767 VIQKVLGQLKGEEREGLIDQI 787
>gi|50293245|ref|XP_449034.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528347|emb|CAG62004.1| unnamed protein product [Candida glabrata]
Length = 897
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 164/340 (48%), Gaps = 60/340 (17%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDI--EMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
+ +A D+ GCRFLQKK++ + ++ +++ ++ EL+ N+LIQKL L
Sbjct: 237 VKLATDQFGCRFLQKKLETPSESNLVRDLMYDQIKPYFLELILDPFGNYLIQKLCDFLTP 296
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN- 364
+Q T LI ++ + + +I + G+R +QK++D + ++Q +L+V N
Sbjct: 297 DQRTALIEAIYPN---VFQISINQYGTRSLQKIIDTVD-------DEQQINLIVKGFSNE 346
Query: 365 -----ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQY 417
V+L +GNHVI++C+ KFP ++ I + N + ++T + GCC+LQ
Sbjct: 347 YTSIRQVVTLINDLNGNHVIQKCIFKFPASKFDFIIAAIIDQNNIIAISTHKHGCCVLQK 406
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYF 475
+ + +Q ++ +V L +GNY++Q++L ++ + A+ +L+G
Sbjct: 407 LLSVCTLQQTFKISVKIVQFLPNLINDQFGNYIIQFLLDIEELDFYMLAEFYNRLSGEIC 466
Query: 476 ALSLGKCSSNVVQKCL--------------LESGEE-QSTGIINEIIRHPEIVQ------ 514
LS K SSNVV+K + E+ E+ +++G++ +I P I +
Sbjct: 467 QLSCLKFSSNVVEKFMKKLFSIISKVIDLYTENTEKYRNSGVLESLILPPTITEDIFNAA 526
Query: 515 -----------------LILDPYGNYVIQTAWDVSQGRRI 537
LI D +GNY +QT D+ +I
Sbjct: 527 VCILIKMVDVFTMKLNLLIRDNFGNYALQTLLDIKNYGKI 566
>gi|366992003|ref|XP_003675767.1| hypothetical protein NCAS_0C04130 [Naumovozyma castellii CBS 4309]
gi|342301632|emb|CCC69403.1| hypothetical protein NCAS_0C04130 [Naumovozyma castellii CBS 4309]
Length = 831
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 155/307 (50%), Gaps = 29/307 (9%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDI--EMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+A D+ GCRFLQKK++ DI +++ ++ + +L+ N+LIQKL L Q
Sbjct: 179 LATDQFGCRFLQKKLESNAESDIVRDLMYEQIKPYILDLILDPFGNYLIQKLCDYLTTAQ 238
Query: 308 MTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
T +I S+ ++ +I + G+R +QK++D + + + + S ++++ + V
Sbjct: 239 RTDMIQSIFP---QVFQISINQYGTRSLQKIIDTVDSDVQIETIIKGFSQEYTSIQQV-V 294
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQYCIPLAQEE 425
+L +GNHVI++C+ KFPP +++ I E N + ++T + GCC+LQ + + +
Sbjct: 295 TLINDLNGNHVIQKCIFKFPPSTFGFVIDAIVEKNNIITISTHKHGCCVLQKLLSVCTLQ 354
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLGKCS 483
Q + ++ L +GNY++Q++L + + ++ +L+ LS K S
Sbjct: 355 QIFTISVKIIQFLPGLINDQFGNYIIQFLLDIDDLDYYLLPEIFKRLSNELCQLSCLKFS 414
Query: 484 SNVVQKCLLE--------------SGEEQSTGIINEIIRHPEIVQ-----LILDPYGNYV 524
SNVV+K + + + +E +N ++ +I LI D +GNY
Sbjct: 415 SNVVEKFIKKLFRNVKKYLQENQSNNDEVVQNSMNILLSIVDIFTLNLNVLIRDNFGNYA 474
Query: 525 IQTAWDV 531
+QT DV
Sbjct: 475 LQTLLDV 481
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G A+D+ G RF+Q+++ + + + I E+ +ELM N++IQK
Sbjct: 420 LRDIYGHGPEFARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKY 479
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EEQ +L L +++ + + L + + G RV+Q+ L+ + EQQ +
Sbjct: 480 FEHGSEEQKARL-LKIMTGKVQSLSL--QMYGCRVVQRALEF--------VQLEQQIEIA 528
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC----LL 415
S L++ + L + +GNHVI++ ++K D +LE + ++ L+T GC LL
Sbjct: 529 SELQDNVLQLVEDQNGNHVIQKSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLL 588
Query: 416 QYCIPLAQEEQKARLIADVVAN-AYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+YC ++ EQK I +V++N + L + YGNYV+Q+IL + + +
Sbjct: 589 EYC---SESEQK--FILEVLSNHIFYLIQDQYGNYVIQHILEFGEEGYRSTITEIVTKNL 643
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR------------HPEIVQLILDPYGN 522
S K +SN V+KC++ +E + NE+++ + + ++ DP+ N
Sbjct: 644 VMFSKHKFASNAVEKCIIYGNKEHRHMLFNELLKDNKSLEVTTVDDNSALALMMKDPFAN 703
Query: 523 YVIQTAWDV 531
YV+Q D
Sbjct: 704 YVVQKMVDA 712
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYI 454
L +I + + A D+ G +Q + A +E+K + ++ +Y L +GNYV+Q
Sbjct: 420 LRDIYGHGPEFARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKY 479
Query: 455 LGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ 514
+ A ++ + G+ +LSL VVQ+ L EQ I +E+ ++Q
Sbjct: 480 FEHGSEEQKARLLKIMTGKVQSLSLQMYGCRVVQRALEFVQLEQQIEIASEL--QDNVLQ 537
Query: 515 LILDPYGNYVIQTAWDVSQGRRI-------RQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
L+ D GN+VIQ + + +I RQ +Y L +H YG V+ ++
Sbjct: 538 LVEDQNGNHVIQKSIEKISFDQISFILESLRQHIYH--------LSTHPYGCRVIQRL 587
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
EL+ ++ + +D+ G +QK +++ + I IL + ++ L H +IQ+L+
Sbjct: 530 ELQDNVLQLVEDQNGNHVIQKSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLLE 589
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+E + K IL V+S+ + + D G+ V+Q +L+ GE R +T+ +V+
Sbjct: 590 YCSESEQ-KFILEVLSNH--IFYLIQDQYGNYVIQHILEFGEEGYRSTITE-----IVT- 640
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN--CLDLAT--DRSGCCLL-- 415
KN+ V SK ++ +++C+ ++ L E+ ++ L++ T D S L+
Sbjct: 641 -KNL-VMFSKHKFASNAVEKCIIYGNKEHRHMLFNELLKDNKSLEVTTVDDNSALALMMK 698
Query: 416 --------QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
Q + E+ K LI + +S+ SY ++
Sbjct: 699 DPFANYVVQKMVDALDEDDKKLLIIKIKQYLKQISKSSYAKHLA 742
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 151/300 (50%), Gaps = 16/300 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++E+ G I+ + D+ G RF+Q K++ N + + + E+ + +LM+ N++IQK
Sbjct: 431 LKEVYGHIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKF 490
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K IL+ + +++ + + RV+QK L+ + EQQ+ L
Sbjct: 491 FEHGN--QVQKKILAE-KMRGKVVDLSVQVYACRVVQKALE--------HVLVEQQAALT 539
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + +GNHVI++ ++ P Y +++ + LA+ GC ++Q +
Sbjct: 540 KELDPEILRVIRDQNGNHVIQKIIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRML 599
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ K ++ ++ A+A +L YGNYV Q+++ P+ ++ + + LS
Sbjct: 600 EHGTDIDKLEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSK 659
Query: 480 GKCSSNVVQKCLLESGEEQSTGI-INEIIRHPE---IVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ ++Q + I + P+ +QL++ D YGNYVIQ QG
Sbjct: 660 HKFASNVVEKCIEHGTQQQRSAIRVQLTTVGPDGTSPLQLMMRDQYGNYVIQKLLGQLQG 719
>gi|255729316|ref|XP_002549583.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
gi|240132652|gb|EER32209.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
Length = 883
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 25/314 (7%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S++++ G + KD+ G RF+Q+K+ E + + + I +E+ + ++LM N++IQK
Sbjct: 545 SLKDIYGHAVEFTKDQHGSRFIQQKLPEASDEEKQTIFNEIWEISYDLMTDVFGNYVIQK 604
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
N Q L+ S++ + + + G RV+Q+ L+A + E Q +
Sbjct: 605 YFEHGNSTQKQVLLESMIG---HIHELSLQMYGCRVVQRALEA--------IETEGQLRI 653
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPP-DYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+ LK+ + K +GNHVI++ ++K P + +L + L+T GC ++Q
Sbjct: 654 IEELKDHILVCCKDQNGNHVIQKSIEKIKPFSKIRFILTSLDTQIYHLSTHPYGCRVIQR 713
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ + E+ + ++ + Y L YGNYV+Q+IL P+ ++ + G
Sbjct: 714 LLEFSDEDDQKMILTQLNNFLYYLILDQYGNYVIQHILENGTPEEKEPILEIVLGSVVQF 773
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQ-------------LILDPYGNYV 524
S K +SNV++KC+ Q I++E++ E + ++ D +GNYV
Sbjct: 774 SKHKFASNVIEKCIKFGDLNQRKRILHEVMLGNEDINDDSEIGDDSPLALMVKDQFGNYV 833
Query: 525 IQTAWDVSQGRRIR 538
IQ + G R
Sbjct: 834 IQKLVEAFDGEERR 847
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 163/340 (47%), Gaps = 17/340 (5%)
Query: 229 RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR 288
R H+ ++++ I+ + D+ G RF+Q+K++ N + + + E+ + +LM
Sbjct: 503 RTHNKSNKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMT 562
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QKL N+ Q K IL+ + +L + + G RV+QK L +
Sbjct: 563 DVFGNYVVQKLFEHGNQSQ--KRILAN-QMKTHILALSTQMYGCRVVQKAL--------E 611
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +QQ+ +V L + + +GNHVI++ +++ P + + +++ N LAT
Sbjct: 612 HILTDQQAAMVKELDQHVMKCVRDQNGNHVIQKAIERVPTQHIRFIIDAFKGNVNKLATH 671
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC ++Q + + + ++A++ +L +GNYV+Q+++ + + ++
Sbjct: 672 PYGCRVIQRMLEHCETPDRESILAELHVCTELLIPDQFGNYVIQHVIENGEEKDRSVMIK 731
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNY 523
+ S K +SNVV+K + E Q II + H + ++ L+ D YGNY
Sbjct: 732 SVIKNVHNFSKHKFASNVVEKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNY 791
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
VIQ +G R+ + D + L+ YGK ++A
Sbjct: 792 VIQKVLGQVKGSE-REMIIDEIKPLLSQLKKFSYGKQIMA 830
>gi|440475954|gb|ELQ44600.1| hypothetical protein OOU_Y34scaffold00071g16 [Magnaporthe oryzae
Y34]
gi|440487789|gb|ELQ67564.1| hypothetical protein OOW_P131scaffold00314g137 [Magnaporthe oryzae
P131]
Length = 847
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 33/293 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q K++ N + + I E+ + +LM+ N++IQK
Sbjct: 464 LKDIYNYVVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKF 523
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + G ++ +L EQQ+ LV
Sbjct: 524 FEHGNQVQKKAL--------------ASQMKGKMALEHVL------------VEQQAELV 557
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ V + K +GNHV+++ ++ P Y +++ I + L+ GC ++Q +
Sbjct: 558 KELEVEIVRIIKDANGNHVVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMM 617
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ KA ++ ++ +A +L+ YGNYV+Q+I+ P+ V++ + G+ LS
Sbjct: 618 EHGSDADKATIMHELHQHAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSK 677
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-----VQLIL-DPYGNYVIQ 526
K +SNVV++C++ SG + I +II P I +QL++ D Y NYV+Q
Sbjct: 678 HKLASNVVERCIV-SGTAEDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQ 729
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 16/301 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + + + E+ + +LM+ N+++QK
Sbjct: 431 LKDIYNHVVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKF 490
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +++ + + RV+QK L+ + EQQ+ L
Sbjct: 491 FEHGNQVQKKVLAEKM---KGKVVDLSMQVYACRVVQKALE--------HVLVEQQAELT 539
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + + + +GNHV+++ ++ P ++ + LA+ GC ++Q +
Sbjct: 540 KELEPDILRVIRDQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRML 599
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E K ++ ++ A+A +L YGNYV Q+++ P+ A ++ + + LS
Sbjct: 600 EHGTESDKMEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQLLTLSK 659
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ EQ T I ++ + Q++ D YGNYVIQ +G
Sbjct: 660 HKFASNVVEKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEG 719
Query: 535 R 535
R
Sbjct: 720 R 720
>gi|167384832|ref|XP_001737111.1| pumilio [Entamoeba dispar SAW760]
gi|165900241|gb|EDR26620.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 526
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 155/317 (48%), Gaps = 16/317 (5%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ ++K+ G R +Q+ +++ N + + I + D + EL AN++IQK + + E +
Sbjct: 213 VSMSKEHNGSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESR 272
Query: 308 MTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
+V + + +LR+ + G RV+QK ++ R+ L +E + LV +++
Sbjct: 273 ------HIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASVKDRRLLFEELRKSLVRCIED- 325
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
+GNHVI++C++K D++ + L+ GC ++Q I +
Sbjct: 326 -------QNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYD 378
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
L+ + ++ L+E YGNYVVQ +L P +++ Q+ G LS+GK SSN
Sbjct: 379 CVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSN 438
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
V++KC + + I+ EI ++ I+Q++ D + NYV+Q + + + +
Sbjct: 439 VIEKCFKFATPNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSLEREKIVELFI 498
Query: 546 VDNSPFLQSHMYGKNVL 562
N L+ Y K++L
Sbjct: 499 KPNLSILKKVTYTKHIL 515
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 165/332 (49%), Gaps = 23/332 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 486 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 545
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
N+ Q ++++Q R +L + + G RV+QK L+ + +QQ+
Sbjct: 546 FEHGNQTQK-----KILANQMRGHVLALSTQMYGCRVVQKALE--------HILTDQQAA 592
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L+N + + +GNHVI++ +++ P + + ++ LA GC ++Q
Sbjct: 593 MVKELENHVLKCVRDQNGNHVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQR 652
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ +E + ++A++ A L +GNYV+Q+++ + ++ + G+ A
Sbjct: 653 MLEHCEEVDRQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAY 712
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K + E + II+ + + ++ L+ D YGNYVIQ +
Sbjct: 713 SKHKFASNVVEKSIEFGAEHERIHIISTLTSANDRGESPLLGLMRDQYGNYVIQKV--LG 770
Query: 533 QGRRI-RQTLYDLVVDNSPFLQSHMYGKNVLA 563
Q + + R+ L D + L+ YGK ++A
Sbjct: 771 QLKHVEREALIDQIKPLLGQLKKFSYGKQIVA 802
>gi|72389821|ref|XP_845205.1| pumilio/PUF RNA binding protein 4 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359913|gb|AAX80338.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma brucei]
gi|70801740|gb|AAZ11646.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 988
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 177/378 (46%), Gaps = 61/378 (16%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPI---DIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
GRI+ +A D+QGCR LQ V ER P +++ ++SE++ L ++M+ N L+QKL+
Sbjct: 494 GRIVKLAADQQGCRMLQS-VLERFPFHSSEVQKVISELLPVLTDVMKDPYGNFLVQKLLE 552
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V +E+ +L+ +S+ L + G+ +QKL+D+ + +QE Q ++ A
Sbjct: 553 VAPDEERMRLLDYHISAS--LCDVAISPHGNYAVQKLIDS------LRSSQEVQ-VVCRA 603
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L+ T+ L +G HVI++ LQ P L + I ++ +D+ D+ GCC++Q C+
Sbjct: 604 LQRGTLQLMTDLNGGHVIQKLLQCISPKDLTFLYDVIVKDTVDVCNDKHGCCVVQKCMDH 663
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV---AQLAGRYFA-L 477
A R ++ + LS + YGNYVV +++ + Q VV A AG L
Sbjct: 664 AINVHLQRTQKAILRHMLQLSLNPYGNYVVTHLISMCNSQSQRHVVNEAAHCAGPALELL 723
Query: 478 SLGKCSSNVVQKCL--------LE-------------------------SGEEQ------ 498
K +SNVV+K + LE GE+
Sbjct: 724 CANKFASNVVEKIVQGCAPSAKLELCRFLFNRSTINTGMSARLMGMDYVLGEQDPQQRLM 783
Query: 499 ---STGIINEIIRHPEIVQLILDPYGNYVIQTAWDV-SQGRRIRQTLYDLVVDNSPFLQS 554
+ + + + ++L+ YGNYV+QT DV + Q L+ L+ SP +
Sbjct: 784 IQPAAAFVTPYQENTALETIVLNSYGNYVVQTMLDVLPISPELAQLLF-LLHKLSPEIMK 842
Query: 555 HMYGKNVLAKVRGNKNRF 572
H +GK + +K+ + R
Sbjct: 843 HNFGKRIASKMEQARERI 860
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 125/234 (53%), Gaps = 12/234 (5%)
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N+ QKL+ +EQ T++ V + L + ++ G+R +Q+L++ P
Sbjct: 9 GNYFCQKLLDKCTDEQRTRI---VHITSPHLAQAALNIHGTRAVQRLIETISTP------ 59
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL-EEIAENCLDLATDRS 410
EQ ++ AL +L K+ +GNHVI++CL + + + I NC+++A+ +
Sbjct: 60 -EQIDSVIHALNPSVTALIKNLNGNHVIQKCLHYLSKEEKNQFIYDAICTNCVEVASHKH 118
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GCC+LQ C A +QK +L+ ++ +A VL + +GNYVVQY+L L + + ++ +
Sbjct: 119 GCCVLQRCFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKF 178
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
G +LS K SSNV++K L+ ++ ++E IR P + + P+G +
Sbjct: 179 LGHICSLSSQKFSSNVIEKTSLDYADDDQREQLSECIR-PFLTAIRYTPHGKRI 231
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 241 EELRGRIILV--------AKDEQGCRFLQKKVDE-RNPIDIEMILSEVIDDLHELMRHQS 291
+E R RI+ + A + G R +Q+ ++ P I+ ++ + + L+++ +
Sbjct: 22 DEQRTRIVHITSPHLAQAALNIHGTRAVQRLIETISTPEQIDSVIHALNPSVTALIKNLN 81
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
NH+IQK + L++E+ + I + + + + G V+Q+ D + + QL
Sbjct: 82 GNHVIQKCLHYLSKEEKNQFIYDAICT--NCVEVASHKHGCCVLQRCFDYATFKQKDQLV 139
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+E + + L + P GN+V++ L Y++++ ++ + L++ +
Sbjct: 140 KE--------ISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGHICSLSSQK 189
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 174/383 (45%), Gaps = 67/383 (17%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ ++ G I+ ++D+ G RF+Q K++ + + +++ SE++ ++LM N++IQK
Sbjct: 893 LRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 952
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ---------- 349
+ +Q L + + +L + + G RV+QK L+ P+ QQ
Sbjct: 953 FEFGSLDQKLALAERI---RGHVLSLALQMYGCRVIQKALEF--IPSDQQVIVTGLAGGF 1007
Query: 350 --------------------------------------LTQEQQSLLVSALKNITVSLSK 371
L+ QS +V L + K
Sbjct: 1008 GLFRLKGAAVQRRLWIVGPGAVVEEAFKQGLDTDVMSALSPVLQSEMVRELDGHVLKCVK 1067
Query: 372 SPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQ----YCIPLAQEEQK 427
+GNHV+++C++ P +++ L+T GC ++Q +C+P EQ
Sbjct: 1068 DQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLP----EQT 1123
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
++ ++ + L + YGNYV+Q++L + + +VA++ G LS K +SNVV
Sbjct: 1124 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVV 1183
Query: 488 QKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
+KC+ + + +I+E+ H + ++ D Y NYV+Q DV++ + R+ +
Sbjct: 1184 EKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQ-RKIVM 1242
Query: 543 DLVVDNSPFLQSHMYGKNVLAKV 565
+ + L+ + YGK++LAK+
Sbjct: 1243 HKIRPHISTLRKYTYGKHILAKL 1265
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 39/347 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID-DLHELMRHQSANHLIQK 298
I++L G + + D+ G RFLQ+K++ + D ++ ++++ + +LM N+++QK
Sbjct: 499 IKQLVGHLAAFSTDQHGSRFLQQKIETCSDEDRALLFHDIVNGNCLQLMMDVFGNYVVQK 558
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L+ +EQ + + +L + + G RV QK L+ P +Q+ L
Sbjct: 559 LLEFGTDEQREVFTEKM---KGHVLTLSLQMYGCRVAQKALE--HIPLNRQVE------L 607
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ L + K +GNHVI++ ++ P + + +++ + N +L++ GC ++Q
Sbjct: 608 IQELDGDVLKCVKDQNGNHVIQKAIECIPYGHLQFVVDAVMPNVYNLSSHPYGCRVIQRI 667
Query: 419 IPLAQEEQKARLIADVVANAYV--------LSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
I AD ++ Y+ L++ YGNYV+Q+++ P ++V +
Sbjct: 668 I---------EHFADARSSVYLQLHTQILHLAQDQYGNYVIQHLMKKGSPSEQREIVEVV 718
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVI 525
G LS K +SNVV++C+ + N ++ E ++ LI D Y NYVI
Sbjct: 719 LGNVLHLSRHKFASNVVERCISYCSDTDRERFFNSLLGENEDGDTYLLNLIKDKYANYVI 778
Query: 526 QTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV----RGN 568
Q DVS+ +R + ++ + L+++ YGK++ V RGN
Sbjct: 779 QKLIDVSK-PELRDRIITVLNPHLNVLKNYTYGKHLYLVVEKFQRGN 824
>gi|50309115|ref|XP_454563.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643698|emb|CAG99650.1| KLLA0E13597p [Kluyveromyces lactis]
Length = 822
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 56/353 (15%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDI--EMILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
+ ++ D+ GCRFLQ+K++ D ++I V + +L+ N+LIQKL L
Sbjct: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALK-- 363
+Q T +I + S + +I + G+R +QK++D E TQE +++
Sbjct: 242 DQKTAMIKDIYPS---VFQISINQYGTRSLQKIIDTVE-------TQEHIDMIIRGFSQE 291
Query: 364 ----NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDLATDRSGCCLLQY 417
V+L +GNHVI++C+ KF P +++ I +N + ++T + GCC+LQ
Sbjct: 292 HTSIEQVVTLINDLNGNHVIQKCIFKFQPANFDFIIDAIVNNDNIITISTHKHGCCVLQK 351
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYF 475
+ + +Q ++ ++ L +GNY++Q++ +K + + +L+ +
Sbjct: 352 LLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLC 411
Query: 476 ALSLGKCSSNVVQKCLLE--------------------------------SGEEQSTGII 503
LS K SSNVV+K + + S GI+
Sbjct: 412 QLSCLKFSSNVVEKYIKKLFAIVMNYVSNTATTSTSTAALNPHDRVDDGDDVVNASMGIL 471
Query: 504 NEI--IRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQS 554
I I I LI D YGNY +QT DV I + + +V N+P L S
Sbjct: 472 LVIADIFMANITSLIRDNYGNYALQTLLDVRNYSAILEHPRNNIVYNNPRLAS 524
>gi|328849409|gb|EGF98590.1| hypothetical protein MELLADRAFT_40771 [Melampsora larici-populina
98AG31]
Length = 370
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 169/342 (49%), Gaps = 21/342 (6%)
Query: 229 RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR 288
R++ HR + ++ G I+ A D+ G R +Q K+D + E++ +E+ ++ +L
Sbjct: 41 RNNKHRRW--ELTDMAGHIVEFAGDQLGSRHIQSKLDTATTEEKEIVFNEIYPNVLQLSM 98
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
AN+++QK N+ Q T+L S+ + +L++ + G RV+QK L+
Sbjct: 99 DVFANYVVQKFFEQGNQAQKTQLAESL---RGHVLQLSLQMYGCRVIQKALEF------- 148
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +QQ ++ L+ + +K + NHV++R L++ P + + + LAT
Sbjct: 149 -VLVDQQHAIIKELEGEVIQCAKDQNANHVLQRSLERIDPKMNRFISQAFVGQAFALATH 207
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC +LQ E+Q L+ ++ + L YGNYV Q+I+ + A ++A
Sbjct: 208 PYGCRVLQRVFEHMPEDQTRGLLEELHRFSNNLMTDQYGNYVAQWIITDGKKEDAAAMMA 267
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNY 523
++ G+ +S K +SNVV+K +L+S EE+ +I EI+ + ++ D + N+
Sbjct: 268 KVKGQVLLMSKHKFASNVVEKAILKSTEEEMHQMIEEILAPRADGTSTVGVMLKDAFANF 327
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSH--MYGKNVLA 563
+Q S+ + R L++ V ++ + YGK ++A
Sbjct: 328 PLQKFLQASKEPQ-RALLFEEVASQLNHMKKYSLSYGKYLVA 368
>gi|392577052|gb|EIW70182.1| hypothetical protein TREMEDRAFT_29689 [Tremella mesenterica DSM
1558]
Length = 337
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 25/305 (8%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANH 294
T + E++G++ D+ G RF+Q+K++ + IL E+ ++++LM N+
Sbjct: 38 TRRWELHEIKGQLAEFCGDQHGSRFIQQKLENATEAERRQILEELEPNVYQLMTDVFGNY 97
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
+IQKL V ++ + L + + +L++ + G RV+QK L EY + EQ
Sbjct: 98 VIQKLFEVCDQTEKAGLAKKM---EGHVLQLSMQMYGCRVVQKAL---EY-----VLTEQ 146
Query: 355 QSLLVSALKNITVSLSKSPHGNHVI------KRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +LV L+ T+ KS + NHVI +R + PPD+ + + + L+L T
Sbjct: 147 RDVLVEELRPHTLECVKSSNANHVIHLRLTIERLITLDPPDF---VTKAFVGHVLELGTH 203
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC +LQ E+ LI ++ + + +GNYVVQ I+ IP+ V+
Sbjct: 204 PYGCRVLQKTFENLPVERTRALIDEMHLHTVKFTMDQFGNYVVQSIIDKGIPEDRHKVID 263
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP-----EIVQLILDPYGNY 523
+L + +S K +SNVV+K L + E T II+EII +I L+ D +GN+
Sbjct: 264 KLLPQIQEMSRHKFASNVVEKALNHADENDRTAIIDEIIGPKPDGTNQIPSLLRDAFGNF 323
Query: 524 VIQTA 528
+Q
Sbjct: 324 AVQVC 328
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 16/248 (6%)
Query: 321 RLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIK 380
+L C D GSR +Q+ L+ R+Q+ +E + + + ++ GN+VI+
Sbjct: 49 QLAEFCGDQHGSRFIQQKLENATEAERRQILEELEPNVYQLMTDV--------FGNYVIQ 100
Query: 381 RCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV 440
+ + L +++ + L L+ GC ++Q + EQ+ L+ ++ +
Sbjct: 101 KLFEVCDQTEKAGLAKKMEGHVLQLSMQMYGCRVVQKALEYVLTEQRDVLVEELRPHTLE 160
Query: 441 LSEHSYGNYVVQYILGLKIPQVTAD----VVAQLAGRYFALSLGKCSSNVVQKCLLESGE 496
+ S N+V+ L ++ +T D V G L V+QK
Sbjct: 161 CVKSSNANHVIHLRLTIE-RLITLDPPDFVTKAFVGHVLELGTHPYGCRVLQKTFENLPV 219
Query: 497 EQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM 556
E++ +I+E+ H V+ +D +GNYV+Q+ D R + D ++ + H
Sbjct: 220 ERTRALIDEM--HLHTVKFTMDQFGNYVVQSIIDKGIPED-RHKVIDKLLPQIQEMSRHK 276
Query: 557 YGKNVLAK 564
+ NV+ K
Sbjct: 277 FASNVVEK 284
>gi|357445831|ref|XP_003593193.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482241|gb|AES63444.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 601
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 7/148 (4%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
Y+S+ E RG I L+AKD+ G RFLQ+ DE DI+MI +E+I + ELM N+LI
Sbjct: 421 YNSLMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLI 480
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
+KL+ V +EEQ ++IL V+ +L+RI + G+RV+QKL++ + T++Q S
Sbjct: 481 RKLLDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLK-------TKQQVS 533
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQ 384
L+VSAL+ + L K +GNHV++ CL+
Sbjct: 534 LVVSALEPGFLILIKDNNGNHVVQHCLE 561
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 343 EYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENC 402
+YP R +L +QQ +V A +N S + SP P Y L+E A C
Sbjct: 386 KYPHRPELDIQQQ--VVGACENPRSSRTGSPF----------TMQPKYNS-LME--ARGC 430
Query: 403 LDL-ATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ 461
+ L A D++G LQ + E + +++ + L +GNY+++ +L + +
Sbjct: 431 IYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKLLDVCSEE 490
Query: 462 VTADV---VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILD 518
+ V Q G+ +SL + VVQK + +Q ++ + P + LI D
Sbjct: 491 QRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSAL-EPGFLILIKD 549
Query: 519 PYGNYVIQ 526
GN+V+Q
Sbjct: 550 NNGNHVVQ 557
>gi|156839900|ref|XP_001643636.1| hypothetical protein Kpol_478p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156114255|gb|EDO15778.1| hypothetical protein Kpol_478p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 841
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 157/329 (47%), Gaps = 35/329 (10%)
Query: 229 RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR 288
R++ + Y+ ++++ G ++ KD+ G RF+Q+++ P + E+I +E+ D + EL
Sbjct: 482 RNNSNNKKYT-LKDIFGYVLEFCKDQHGSRFIQQELAVVTPSEREVIFNEIRDHILELSD 540
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N++IQK +E Q L+ + R+ ++ + RV+Q+ L+ E R
Sbjct: 541 DVFGNYVIQKFFEYGSETQKNILVDQF---RNRMQKLSMQMYACRVIQRALEFIELQQRI 597
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
L E L + + + K +GNHVI++ +++ P D +L+ + L+T
Sbjct: 598 DLVLE--------LADCVLPMIKDQNGNHVIQKAIERIPIDKLPFILDSLKGQIYHLSTH 649
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK---------- 458
GC ++Q + ++ + R++ ++ L + YGNYV+Q+IL K
Sbjct: 650 AYGCRVIQRLLEFGSKDDQTRILEELHDFIPYLIQDQYGNYVIQHILQQKDEDLMKENMS 709
Query: 459 --IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII--------- 507
I + ++V ++ S K +SNVV+K +L E+Q + ++II
Sbjct: 710 PSIAKAKQEIVDIVSENVVEFSKHKFASNVVEKTILHGNEKQRNAVTSKIIPRDLEHAAN 769
Query: 508 --RHPEIVQLILDPYGNYVIQTAWDVSQG 534
+ ++ ++ D + NYV+Q V+ G
Sbjct: 770 LEDNAPMILMMRDQFANYVVQKLVSVTGG 798
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 162/331 (48%), Gaps = 21/331 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N+++QKL
Sbjct: 488 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 547
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
N+ Q ++++Q R +L + + G RV+QK L+ + +QQ+
Sbjct: 548 FEHGNQTQK-----KILANQMRGHVLALSTQMYGCRVVQKALE--------HILTDQQAA 594
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L+N + + +GNHVI++ +++ P Y + ++ LA GC ++Q
Sbjct: 595 MVKELENHVLKCVRDQNGNHVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQR 654
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ +E + ++A++ A L +GNYV+Q+++ + ++ + G+ A
Sbjct: 655 MLEHCEEVDRQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAY 714
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K + E + II+ + + ++ L+ D YGNYVIQ
Sbjct: 715 SKHKFASNVVEKSIEFGAEHERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVLGQL 774
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+ R+ L + + L+ YGK ++A
Sbjct: 775 KDAE-REALIEQIKPLLSQLKKFSYGKQIVA 804
>gi|312075892|ref|XP_003140618.1| hypothetical protein LOAG_05033 [Loa loa]
Length = 607
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 167/345 (48%), Gaps = 22/345 (6%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
++R + + +L ++ A+D+ G RF+Q+K++ + + + + EV LM
Sbjct: 249 NNRNPHLQLTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVF 308
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK EQ L +V + ++ + + G RV+QK L++ E + ++
Sbjct: 309 GNYVIQKFFEYGTTEQKNILTNAV---KGNVMSLALQMYGCRVIQKALESIEPKQQMEIL 365
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD---YTKDLLEEIAEN--CLDLA 406
+E + ++ +K+ +GNHV+++ +++ + D L +N +L+
Sbjct: 366 KEMEGQVLKCVKD--------QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLS 417
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
T GC ++Q + +EQK ++ + + L YGNYV+Q+++ + +
Sbjct: 418 THPYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRI 477
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYG 521
V Q+ G + K +SNV++KCL +I E+ +P ++ ++ D +
Sbjct: 478 VNQVKGDVLHFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFA 537
Query: 522 NYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
NYV+Q DV+ +R+ + + + P L+ + YGK+++ K+
Sbjct: 538 NYVVQKMLDVAD-SALRKKMMLAIKPHIPALRKYNYGKHIITKLE 581
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 342 GEYPTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
GE TR L + ++ L ++ L V ++ HG+ I++ L++ + + +
Sbjct: 235 GERQTRSHLLDDFRNNRNPHLQLTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFD 294
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
E+A + L TD G ++Q EQK L V N L+ YG V+Q L
Sbjct: 295 EVALHAQSLMTDVFGNYVIQKFFEYGTTEQKNILTNAVKGNVMSLALQMYGCRVIQKALE 354
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE---IV 513
P+ +++ ++ G+ + ++VVQK + + II+ ++ + +
Sbjct: 355 SIEPKQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVC 414
Query: 514 QLILDPYGNYVIQTAWD 530
L PYG VIQ +
Sbjct: 415 NLSTHPYGCRVIQRVLE 431
>gi|323457211|gb|EGB13077.1| hypothetical protein AURANDRAFT_52010 [Aureococcus anophagefferens]
Length = 613
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 31/342 (9%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKV-DERNP-IDIEMILSEVIDDLHELMRHQSANHLI 296
S +L+GR+ ++ +D+ G RFLQ + D R P + ++I SEV+ EL N+++
Sbjct: 279 SATDLKGRVAVLCRDQHGSRFLQAHLEDTRAPSAERDLIFSEVLPKSRELATDVFGNYVV 338
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QK++ + + +K+ ++ + + + + G RV+QK LDA P R+ L
Sbjct: 339 QKVLTCGDADTKSKVYEAL---KGHCVALSLHVYGCRVVQKALDA--LPPREALA----- 388
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKD-LLEEIAENCLDLATDRSGCCLL 415
++ + + +GNHVI++C + D +L N LAT GC +L
Sbjct: 389 -VIDEFRESVLLCVHDQNGNHVIQKCRDYAAFGESVDFVLAAFRGNARSLATHSYGCRVL 447
Query: 416 QYCIPLAQEEQKARLIADV-VANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
Q + E L+ ++ +A+ L E Y NYV+Q+ + A ++A +
Sbjct: 448 QRVLEHCGPEHTGPLLDELQLADLPPLIEDQYANYVMQHAIQYGRHSDKAKLLAAVKANL 507
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH--------PEIVQLILDPYGNYVIQ 526
S K +SNVV+KCL EE + I++ ++ + LI+DP+ NYV+Q
Sbjct: 508 LDFSRHKFASNVVEKCLDFGSEETRSEIVDAVVDDVGADHSPTSALKLLIVDPFANYVVQ 567
Query: 527 TAWDVSQGRRIRQTLYDLVVDN-SPFLQ--SHMYGKNVLAKV 565
D++ ++R+ +VD P + H GK++LA++
Sbjct: 568 KVVDLADDAQVRK-----IVDGLRPHVAQIKHTPGKHILARL 604
>gi|302916121|ref|XP_003051871.1| hypothetical protein NECHADRAFT_38196 [Nectria haematococca mpVI
77-13-4]
gi|256732810|gb|EEU46158.1| hypothetical protein NECHADRAFT_38196 [Nectria haematococca mpVI
77-13-4]
Length = 394
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 151/314 (48%), Gaps = 20/314 (6%)
Query: 218 SSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILS 277
S+ N+F R R+ T + ++ G I+ + D+QG RF+Q ++D N + + I
Sbjct: 57 STVLNDFRNRQRNRQQFT----LSQIYGHIVEFSGDQQGSRFVQSQIDTANSDEKDRIFR 112
Query: 278 EVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQK 337
E+ + +LM+ N++IQK + Q+ K IL+ + R++ + + RV+QK
Sbjct: 113 EIEPNAVQLMKDLFGNYVIQKFFD--HGSQVQKSILAD-KMKGRMVDMSMQMYSCRVVQK 169
Query: 338 LLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEE 397
+D + QQ+ LV L+ + + K HGNHV+++ +Q P ++ +++
Sbjct: 170 AMD--------HILVNQQAELVQELQPRIIEVIKDEHGNHVVQKIIQLVPREHIDFIMDV 221
Query: 398 IAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL 457
+ A+ GC ++Q + EE K + ++ + L +GNYV Q+IL
Sbjct: 222 FKGRVREFASHNYGCRVIQRILEYGSEEDKLTFLEELHNSWKFLFNDQFGNYVAQHILDK 281
Query: 458 KIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----I 512
+ + + + LS K +SNVV+KC+ +Q + I + E +
Sbjct: 282 GEAKDRDRIYTMVMSQILTLSRQKQASNVVEKCIHTCTPQQRSEIYKVMTTVCEDGSMPL 341
Query: 513 VQLILDPYGNYVIQ 526
QL+ D +GNYVI+
Sbjct: 342 QQLMSDQFGNYVIR 355
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 167/333 (50%), Gaps = 37/333 (11%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHE------LMRHQSANHLIQKLI 300
I+ A +QG + LQ + N +L V + E LM Q H+ KLI
Sbjct: 153 FIMFASTQQGSKHLQDLLAYSNSDFASKLLETVTASVVEIPVINYLMVDQYGCHVCSKLI 212
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
N++Q+ ++ + + ++ ++IC +++GS++++KL+ + ++S L+
Sbjct: 213 DSCNDKQLALILERITRNDEQFVQICCNINGSKMIKKLIK-----------KVKRSCLIC 261
Query: 361 ALKNITVSLSK-------SPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
+ TVSL K + G++V+ C+ + L E +CL LATD +GC
Sbjct: 262 YM---TVSLYKGFCQLAINQIGSYVVVFCMDCLDVKQSALLYEAAISHCLILATDATGCV 318
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
+ I Q + L+ + NA LS+ GN+VVQ +L L+ P + A + AQL G
Sbjct: 319 SINNFIDRIQGSHRQTLLELISDNAVFLSQDPSGNHVVQKVLELENPIINAKIGAQLKGH 378
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIR--HPEIVQLILDPYGNYVIQTAWDV 531
Y LS K S+VV+KCL+ + ++ +++ ++ Q+ D +GNYVIQ A V
Sbjct: 379 YARLSFQKWGSHVVEKCLV---SQPIVYVVQDLLTCGSSQLSQIARDQFGNYVIQKALKV 435
Query: 532 SQGRRIRQTLYDLVVDN-SPFLQS--HMYGKNV 561
++ + I TL+ +++++ P L + + YGK V
Sbjct: 436 TKKKNI--TLHLILLNSLKPNLNALQNGYGKKV 466
>gi|393907055|gb|EJD74503.1| puf domain-containing protein 9 [Loa loa]
Length = 731
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 167/345 (48%), Gaps = 22/345 (6%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
++R + + +L ++ A+D+ G RF+Q+K++ + + + + EV LM
Sbjct: 373 NNRNPHLQLTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVF 432
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK EQ L +V + ++ + + G RV+QK L++ E + ++
Sbjct: 433 GNYVIQKFFEYGTTEQKNILTNAV---KGNVMSLALQMYGCRVIQKALESIEPKQQMEIL 489
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD---YTKDLLEEIAEN--CLDLA 406
+E + ++ +K+ +GNHV+++ +++ + D L +N +L+
Sbjct: 490 KEMEGQVLKCVKD--------QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLS 541
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
T GC ++Q + +EQK ++ + + L YGNYV+Q+++ + +
Sbjct: 542 THPYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRI 601
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYG 521
V Q+ G + K +SNV++KCL +I E+ +P ++ ++ D +
Sbjct: 602 VNQVKGDVLHFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFA 661
Query: 522 NYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
NYV+Q DV+ +R+ + + + P L+ + YGK+++ K+
Sbjct: 662 NYVVQKMLDVAD-SALRKKMMLAIKPHIPALRKYNYGKHIITKLE 705
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 342 GEYPTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
GE TR L + ++ L ++ L V ++ HG+ I++ L++ + + +
Sbjct: 359 GERQTRSHLLDDFRNNRNPHLQLTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFD 418
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
E+A + L TD G ++Q EQK L V N L+ YG V+Q L
Sbjct: 419 EVALHAQSLMTDVFGNYVIQKFFEYGTTEQKNILTNAVKGNVMSLALQMYGCRVIQKALE 478
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE---IV 513
P+ +++ ++ G+ + ++VVQK + + II+ ++ + +
Sbjct: 479 SIEPKQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVC 538
Query: 514 QLILDPYGNYVIQ 526
L PYG VIQ
Sbjct: 539 NLSTHPYGCRVIQ 551
>gi|254586475|ref|XP_002498805.1| ZYRO0G18964p [Zygosaccharomyces rouxii]
gi|238941699|emb|CAR29872.1| ZYRO0G18964p [Zygosaccharomyces rouxii]
Length = 830
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 164/323 (50%), Gaps = 38/323 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
+EEL + +A D+ GCRFLQKK++ E N + +++ ++ +L+ N+L+
Sbjct: 156 LEELD--YVKLATDQFGCRFLQKKLESPAESNLVR-DLMYEQIKGCFLDLILDSFGNYLV 212
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL L +Q T LI + + +I + G+R +QK++D + ++ L + S
Sbjct: 213 QKLCEYLTLDQKTFLIQVIYP---HVFQISINQYGTRSLQKIIDTVDNESQIDLITKGFS 269
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCL 414
++++ + V+L +GNHVI++C+ KFPP +++ I E N + ++T + GCC+
Sbjct: 270 QEHTSIEQV-VTLINDLNGNHVIQKCIFKFPPSKFDFIIDAIVEHNNIITISTHKHGCCV 328
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAG 472
LQ + + +Q ++ +V L +GNY++Q++L +K + A++ +L+
Sbjct: 329 LQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAEIFNRLSN 388
Query: 473 RYFALSLGKCSSNVVQK-------CLLESGEE---------------QSTGIINEIIR-- 508
LS K SSNVV+K ++ES + + GI+ II
Sbjct: 389 ELCQLSCLKFSSNVVEKFIKKLFGIVMESVPKAQENLVPEPNDDVVTAAMGILLTIIDIF 448
Query: 509 HPEIVQLILDPYGNYVIQTAWDV 531
+ LI D +GNY +QT DV
Sbjct: 449 TVNLNVLIRDNFGNYALQTLLDV 471
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 19/221 (8%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L E P L ++ L+ +K + L GN+++++
Sbjct: 162 VKLATDQFGCRFLQKKL---ESPAESNLVRD---LMYEQIKGCFLDLILDSFGNYLVQKL 215
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
+ D L++ I + ++ ++ G LQ I E + LI + +
Sbjct: 216 CEYLTLDQKTFLIQVIYPHVFQISINQYGTRSLQKIIDTVDNESQIDLITKGFSQEHTSI 275
Query: 443 EHSY-------GNYVVQYILGLKIPQVTADVVAQLAGRY---FALSLGKCSSNVVQKCLL 492
E GN+V+Q + K P D + + +S K V+QK L
Sbjct: 276 EQVVTLINDLNGNHVIQKCI-FKFPPSKFDFIIDAIVEHNNIITISTHKHGCCVLQKLLS 334
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +I++ + LI D +GNY+IQ D+ +
Sbjct: 335 VCTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKE 373
>gi|444319188|ref|XP_004180251.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
gi|387513293|emb|CCH60732.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
Length = 951
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 57/367 (15%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI----EMILSEVIDDLHELMR 288
+ T + IE+L I ++ D+ GCRFLQKK++ N + +++ ++ +L+
Sbjct: 503 NSTKNTPIEKLD--YIKLSMDQFGCRFLQKKLENSNKQESLKVRDLMFLQIQPVFLDLIL 560
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY-PTR 347
N+LIQKL L +Q T LI S+ + + +I + G+R +QK++D+ E T+
Sbjct: 561 DPFGNYLIQKLCDYLTIDQKTILIQSIY---KNVYQISINQYGTRSLQKIIDSIENNETQ 617
Query: 348 QQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDL 405
+ + S+ +++ I +SL +GNHVI++C+ KFP LL I N + +
Sbjct: 618 IDILMQGFSIENTSIDQI-ISLMNDLNGNHVIQKCIFKFPNSKFDFLLNSIIYENNIVKI 676
Query: 406 ATDRSGCCLLQYCIPLAQEEQKARLIAD-VVANAYVLSEHSYGNYVVQYILGLKIPQV-- 462
+T + GCC+LQ + + + Q +LI+D V+ L +GNY++QYIL +K ++
Sbjct: 677 STHKHGCCVLQKLLGVCNDNQ-TQLISDKVIEYLNGLINDQFGNYIIQYILNIKTIEIPF 735
Query: 463 TADVVAQLAGRYFALSLGKCSSNVVQKCLLE-------------------SG-------- 495
+ L G + LS K SSNV++K + + SG
Sbjct: 736 MLKIYQILDGNFCKLSCLKFSSNVIEKYMRKLFTIVKNNTFDNTNNNNNYSGSNHKHHNN 795
Query: 496 -------EEQSTGIINEIIRHP------EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLY 542
+++ II II ++ LI D +GNY +QT + +
Sbjct: 796 QYKNNIVKQEDVKIIQNIILRIVDEFTRDLNVLIKDKFGNYTLQTLLNTYNYNELIAAFI 855
Query: 543 DLVVDNS 549
L +DNS
Sbjct: 856 PLSIDNS 862
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH--PEIVQLILDPYGNYVIQTAWD- 530
Y LS+ + +QK L S +++S + + + P + LILDP+GNY+IQ D
Sbjct: 515 YIKLSMDQFGCRFLQKKLENSNKQESLKVRDLMFLQIQPVFLDLILDPFGNYLIQKLCDY 574
Query: 531 --VSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ Q + Q++Y V + + YG L K+
Sbjct: 575 LTIDQKTILIQSIYKNVYQ----ISINQYGTRSLQKI 607
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 146/292 (50%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM+ N+++QK
Sbjct: 424 LKDIYSYVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKF 483
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K IL+ + +++ + + RV+QK L + + EQQ+ L
Sbjct: 484 FEHGN--QVQKKILAE-KMRGKVVDLSVQVYACRVVQKAL--------EHVLVEQQAELT 532
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + +GNHVI++ ++ P Y +++ + LA+ GC ++Q +
Sbjct: 533 KELSPDIIRVIRDQNGNHVIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRML 592
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E K ++ ++ A+A +L YGNYV Q+++ P+ ++ + + LS
Sbjct: 593 EYGTETDKLEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSK 652
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR----HPEIVQLIL-DPYGNYVIQ 526
K +SNVV+KC+ Q + I ++ +QL++ D YGNYVIQ
Sbjct: 653 HKFASNVVEKCIEHGTPAQRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQ 704
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 18/250 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
E++RG+++ ++ CR +QK ++ + E+ D+ ++R Q+ NH+IQK+I
Sbjct: 497 EKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELSPDIIRVIRDQNGNHVIQKII 556
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++ Q I+ + Q + + G RV+Q++L+ G + ++ E L S
Sbjct: 557 ELV-PRQYIDFIMDALRGQ--VTGLASHTYGCRVIQRMLEYGTETDKLEIMTE---LHAS 610
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
A IT +GN+V + +Q P+ L++ + L L+ + +++ CI
Sbjct: 611 AQILIT-----DQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIE 665
Query: 421 -------LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
A EQ +++D + ++ YGNYV+Q +LG +V ++ +
Sbjct: 666 HGTPAQRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLLGQLHGAEKEILVDEIKPQ 725
Query: 474 YFALSLGKCS 483
+F+L S
Sbjct: 726 FFSLKKNGAS 735
>gi|403339467|gb|EJY68995.1| hypothetical protein OXYTRI_10388 [Oxytricha trifallax]
Length = 840
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 46/355 (12%)
Query: 253 DEQGCRFLQKKVDE--RNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTK 310
D+ GCR LQKK+DE + + + ++ ++ ++M Q N+L QK++ + + ++ +
Sbjct: 373 DQAGCRMLQKKLDEDCQEQLFKQALIMRLMPLFQDIMVDQFGNYLTQKILELASIMEIKQ 432
Query: 311 LILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLS 370
+I V+ S + I + G+R +Q L+D + T ++ LK LS
Sbjct: 433 IINQVLPS---INDIAMTVHGTRAIQFLVDILNMNLKYLDTDVLN--IIEQLKLQIKELS 487
Query: 371 KSPHGNHVIKRCLQKF-----PPD-----------YTKDLLEEIAENCLDLATDRSGCCL 414
S HGNHVI+ L F P D YT+ + + +C+++ + + GCC+
Sbjct: 488 LSVHGNHVIQAFLCVFRSSQNPEDQDQEGSEVFQRYTQFIFDACINDCIEIGSHKHGCCV 547
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q C+ +E QK L ++ N + L E YGNY+VQ +L L + + +
Sbjct: 548 MQRCLEKGREVQKLALADVIIYNLHSLIEDPYGNYLVQNVLKLNNVDRNDQIFQMIGSDF 607
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGII----------------------NEIIRHPEI 512
LS K SSNV++KCL + + +I N + R I
Sbjct: 608 IRLSQLKFSSNVIEKCLESKMKNVTVDMILLGQIINDDQTVLRDLGYQLSKNRVTRINFI 667
Query: 513 V-QLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR 566
V LI +GNYV+Q + + ++R + + S LQ +G+ VL K++
Sbjct: 668 VDNLIFHQFGNYVLQKIITIIKNDQLRVIILQRIGQLSGDLQRTKHGQKVLQKLQ 722
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 31/261 (11%)
Query: 326 CDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQK 385
C D +G R++QK LD E Q Q L+ ++I V GN++ ++ L+
Sbjct: 371 CYDQAGCRMLQKKLD--EDCQEQLFKQALIMRLMPLFQDIMV----DQFGNYLTQKILEL 424
Query: 386 FPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK------ARLIADVVANAY 439
K ++ ++ + D+A G +Q+ + + K +I +
Sbjct: 425 ASIMEIKQIINQVLPSINDIAMTVHGTRAIQFLVDILNMNLKYLDTDVLNIIEQLKLQIK 484
Query: 440 VLSEHSYGNYVVQYILGL----KIPQVTADVVAQLAGRYFALSLGKCSSN---------- 485
LS +GN+V+Q L + + P+ +++ RY C ++
Sbjct: 485 ELSLSVHGNHVIQAFLCVFRSSQNPEDQDQEGSEVFQRYTQFIFDACINDCIEIGSHKHG 544
Query: 486 --VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
V+Q+CL + E Q + + II + + LI DPYGNY++Q ++ R Q ++
Sbjct: 545 CCVMQRCLEKGREVQKLALADVIIYN--LHSLIEDPYGNYLVQNVLKLNNVDRNDQ-IFQ 601
Query: 544 LVVDNSPFLQSHMYGKNVLAK 564
++ + L + NV+ K
Sbjct: 602 MIGSDFIRLSQLKFSSNVIEK 622
>gi|218194334|gb|EEC76761.1| hypothetical protein OsI_14838 [Oryza sativa Indica Group]
Length = 756
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 163/343 (47%), Gaps = 67/343 (19%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G ++ V+ D+ G RF+Q+K++ + D E I E++ + L N++IQK
Sbjct: 451 GHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFAT 510
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
E Q+++L + + L++ + G RV+QK++D + E++ +V LKN
Sbjct: 511 ESQLSQLADQL---RGHFLQLSFQMYGCRVVQKVIDV--------VDLERKISIVGELKN 559
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ +GNH + E+C + AT
Sbjct: 560 SVLRCISDQNGNH-------------------RVLEHCHNPAT----------------- 583
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSS 484
++ ++ ++V A+ L+E +GNYVVQ++L P+ + ++ +L+G+ LS K +S
Sbjct: 584 --QSAVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYAS 641
Query: 485 NVVQKCLLESGEEQSTGIINEIIRHPEIVQ-LILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
NVV+KCL ++ G+I EI+ + Q L+ D +GNYV+Q RI QT D
Sbjct: 642 NVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQ---------RILQTCDD 692
Query: 544 --LVVDNSPF------LQSHMYGKNVLAKVRGNKNRFHNRVAM 578
LVV S L+++ +GK+++A+V NRV M
Sbjct: 693 KFLVVILSSIKMHLNELKNYTFGKHIVARVEKLIITGENRVRM 735
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEM---ILSEVIDDLHELMRHQSANHLIQ 297
++LRG + ++ GCR +QK +D +D+E I+ E+ + + + Q+ NH +
Sbjct: 519 DQLRGHFLQLSFQMYGCRVVQKVID---VVDLERKISIVGELKNSVLRCISDQNGNHRV- 574
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
L N + ++ +V +R + +D G+ V+Q +L+ G E++S
Sbjct: 575 -LEHCHNPATQSAVMDEIV---ERAFDLTEDKFGNYVVQHVLEHGR--------PEERSS 622
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI---AENCLDLATDRSGCCL 414
++ L V+LS+ + ++V+++CL PD + L+ EI + L D+ G +
Sbjct: 623 IIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYV 682
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKI 459
+Q + ++ +++ + + L +++G ++V + L I
Sbjct: 683 VQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 727
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 16/301 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + + + E+ + +LM+ N+++QK
Sbjct: 454 LKDIYNHLVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKF 513
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +++ + + RV+QK L+ + EQQ+ L
Sbjct: 514 FEHGNQVQKKVLAEKM---KGKVVDLSVQVYACRVVQKALE--------HVLVEQQAELT 562
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+ + + + +GNHV+++ ++ P ++ + LA+ GC ++Q +
Sbjct: 563 KELEPEILRVIRDQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRML 622
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E K ++ ++ A+A +L YGNYV Q+++ P+ A ++ + + LS
Sbjct: 623 EHGTESDKMEIMMELHASAQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSK 682
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ EQ T I ++ + Q++ D YGNYVIQ +G
Sbjct: 683 HKFASNVVEKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEG 742
Query: 535 R 535
R
Sbjct: 743 R 743
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 13/244 (5%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
L+ D GSR +Q+ L++ + Q+ +E + + +K++ GN+V+++
Sbjct: 461 LVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDV--------FGNYVVQK 512
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ K L E++ +DL+ C ++Q + EQ+A L ++ +
Sbjct: 513 FFEHGNQVQKKVLAEKMKGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRV 572
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
GN+VVQ I+ L Q ++ + G+ AL+ V+Q+ L E
Sbjct: 573 IRDQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKME 632
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGR-RIRQTLYDLVVDNSPFLQSHMYGKN 560
I+ E+ H LI D YGNYV Q + G+ R + DLV+ L H + N
Sbjct: 633 IMMEL--HASAQILITDQYGNYVAQHV--IQNGKPEDRAQMIDLVMSQLLTLSKHKFASN 688
Query: 561 VLAK 564
V+ K
Sbjct: 689 VVEK 692
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
E+++G+++ ++ CR +QK ++ + E+ ++ ++R Q+ NH++QK+I
Sbjct: 527 EKMKGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRVIRDQNGNHVVQKII 586
Query: 301 GVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
++ Q I++ V Q + + G RV+Q++L+ G + ++ E L S
Sbjct: 587 ELV-PRQCIDFIMNAVRGQ--VTALASHTYGCRVIQRMLEHGTESDKMEIMME---LHAS 640
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
A IT +GN+V + +Q P+ +++ + L L+ + +++ CI
Sbjct: 641 AQILIT-----DQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSKHKFASNVVEKCIE 695
Query: 421 LAQEEQKARL-------IADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
EQ+ + +D + + YGNYV+Q +LG + +V ++ +
Sbjct: 696 HGTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEGREREMLVEEIKPQ 755
Query: 474 YFAL 477
++AL
Sbjct: 756 FYAL 759
>gi|384245702|gb|EIE19195.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 158/330 (47%), Gaps = 50/330 (15%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI---DDLHELMRHQSANHLI 296
++++ G + + +D+ G RF+Q K++ +P ++ +EV D +LM N+++
Sbjct: 478 LKDIAGHVYDLCRDQFGSRFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVV 537
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QK + +++Q +++ +++ + L + + G RV+QK ++ P + +
Sbjct: 538 QKFLDFGDDDQ-KEVMAALIQGHVKTLSL--QVYGCRVIQKAIEVLRPPLKDSI------ 588
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKF-PPDYTKDLLEEIAEN-------------- 401
V+ LK + +GNHVI++C++ P + DLLEE+A+
Sbjct: 589 --VAELKGHVIECISDQNGNHVIQKCIECITPSEPIADLLEELADGPEGAAAAQRSRAPL 646
Query: 402 ----------CLDLATDRSGCCLLQYCIPLAQ-EEQKARLIADVVANAYVLSEHSYGNYV 450
+ LA GC ++Q + E+ K RL+A V NA L+ +YGNYV
Sbjct: 647 PPGKPALSAGFVPLARHPYGCRVVQRILEKCTLEDYKHRLVATVTENALDLARDTYGNYV 706
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP 510
+Q+ L P+ +++ +L LS K +SNVV+KCL +Q +++ ++
Sbjct: 707 IQHSLAFGSPEEKVEIIQRLQAHIVELSTHKFASNVVEKCLEFGTRDQRRRLVSTMLGEG 766
Query: 511 ---------EIVQ-LILDPYGNYVIQTAWD 530
+++Q + D YGNYV+Q +
Sbjct: 767 SGLDSAGADQLLQTMTKDQYGNYVVQKTLE 796
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 29/230 (12%)
Query: 362 LKNIT---VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAEN---CLDLATDRSGCCLL 415
LK+I L + G+ I+ ++ P+ E+ N L L D G ++
Sbjct: 478 LKDIAGHVYDLCRDQFGSRFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVV 537
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
Q + ++QK + A + + LS YG V+Q + + P + +VA+L G
Sbjct: 538 QKFLDFGDDDQKEVMAALIQGHVKTLSLQVYGCRVIQKAIEVLRPPLKDSIVAELKGHVI 597
Query: 476 ALSLGKCSSNVVQKCL-LESGEEQSTGIINEIIRHPE----------------------I 512
+ ++V+QKC+ + E ++ E+ PE
Sbjct: 598 ECISDQNGNHVIQKCIECITPSEPIADLLEELADGPEGAAAAQRSRAPLPPGKPALSAGF 657
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
V L PYG V+Q + + L V +N+ L YG V+
Sbjct: 658 VPLARHPYGCRVVQRILEKCTLEDYKHRLVATVTENALDLARDTYGNYVI 707
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +M+ SE++ + LM N++IQK
Sbjct: 52 LRDLVNHIVEFSQDQHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTDVFGNYVIQKF 111
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
EQ T L V + +L + + G RV+Q+ L++ ++ EQQ +V
Sbjct: 112 FEFGTPEQKTTLAQKV---RGHVLPLALQMYGCRVIQRALES--------ISPEQQEEIV 160
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ + L+T GC ++Q +
Sbjct: 161 RELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRIL 220
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ A ++ ++ + L + YGNYV+Q++L P+ + ++ + G+ LS
Sbjct: 221 EHCTPEQTAPILEELHRHTEQLIQDQYGNYVIQHVLEHGKPEDKSQIILSVRGKVLVLSQ 280
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEI 506
K +SNVV+KC+ + + +I E+
Sbjct: 281 HKFASNVVEKCVTHATRAERAVLIEEV 307
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 11/250 (4%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D G R +Q+ L+ +Q + E +++A N+ + GN+VI++
Sbjct: 59 IVEFSQDQHGPRFIQQKLERATVAEKQMVFSE----ILAAAYNLMTDV----FGNYVIQK 110
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ P+ L +++ + L LA GC ++Q + EQ+ ++ ++ +
Sbjct: 111 FFEFGTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISPEQQEEIVRELDGHVLKC 170
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ GN+VVQ + P ++ +G+ FALS V+Q+ L EQ+
Sbjct: 171 VKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAP 230
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
I+ E+ RH E QLI D YGNYVIQ + + Q + V L H + NV
Sbjct: 231 ILEELHRHTE--QLIQDQYGNYVIQHVLEHGKPEDKSQIILS-VRGKVLVLSQHKFASNV 287
Query: 562 LAKVRGNKNR 571
+ K + R
Sbjct: 288 VEKCVTHATR 297
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEH 444
+FP +DL+ I E + D+ G +Q + A +K + ++++A AY L
Sbjct: 46 RFPSLQLRDLVNHIVE----FSQDQHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTD 101
Query: 445 SYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIIN 504
+GNYV+Q P+ + ++ G L+L V+Q+ L EQ I+
Sbjct: 102 VFGNYVIQKFFEFGTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISPEQQEEIVR 161
Query: 505 EIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
E+ H +++ + D GN+V+Q + + Q + + L +H YG V+ +
Sbjct: 162 ELDGH--VLKCVKDQNGNHVVQKCIECVDPHAL-QFIINAFSGQVFALSTHPYGCRVIQR 218
Query: 565 V 565
+
Sbjct: 219 I 219
>gi|388855193|emb|CCF51087.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Ustilago hordei]
Length = 959
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R+RH +R + ++ G I+ + D+ G RF+Q+K+D + + +++ EV+ +L
Sbjct: 585 RSRHSKNRQF--ELADICGSIVEFSSDQHGSRFIQEKLDSASDEEKKLVFHEVLPQARQL 642
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N++IQK++ +EEQ L + + +L + G RV+QK D
Sbjct: 643 MTDVFGNYVIQKMLEHGDEEQRDVLGREM---EGHILSLSLGTYGCRVVQKAFD------ 693
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLA 406
++ Q+ L + L + + + NHV+++ +++ P + + LA
Sbjct: 694 --HISASQREKLAAELDGHIMQCVRDQNANHVVQKVIERVHPTKMDFIPKAFIGQVASLA 751
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
+ C +LQ C +E Q L+ ++ A A+ L +H YGNYV+Q++L P A V
Sbjct: 752 SHCYSCRVLQRCFECCEEGQTRALLEELHAEAFGLMQHQYGNYVIQWVLQSGKPYDRARV 811
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
++++ G LS K +SNV+++ + ++ EI+
Sbjct: 812 ISKIKGLVLTLSRHKFASNVIEQVIRTCNSTDRNELLEEIL 852
>gi|164425099|ref|XP_957151.2| hypothetical protein NCU06511 [Neurospora crassa OR74A]
gi|157070789|gb|EAA27915.2| predicted protein [Neurospora crassa OR74A]
Length = 821
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 34/305 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G I A D G RF+Q K+ + + + E++++L LM N+++QK
Sbjct: 385 LKQIYGSIADFAADRAGSRFIQDKLQSASSEEKAEVWRELMEELMPLMTDVYGNYVVQKF 444
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+EQ T + + ++ +LR+ ++ G R + + + Q LV
Sbjct: 445 FEHGTQEQKTSMAGII---KKNMLRLSENKYGCRALDNIF------------RRYQVELV 489
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--AENCLDLATDRSGCCLLQY 417
+ LK+ L+KS GNHVI+ ++ P D + + ++LA ++ C ++Q
Sbjct: 490 NELKDHVDKLNKSQEGNHVIQMIIKLLPRDEIGFIYDSFRGPGKVMELALNQYACRVIQR 549
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ EE + L++++ A+ L +YGNYV Q+I+ P+ A ++A + + L
Sbjct: 550 ALEHGNEEDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKPEDRARMIAAVMSQTITL 609
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE----------------IVQLILDPYG 521
S K +SNVV+KC + G + I ++ P+ + L+LD +
Sbjct: 610 STHKHASNVVEKC-INYGTPEDVRRIRDMFFSPQDGMGGYSSDHQSPDSFLRFLMLDHFA 668
Query: 522 NYVIQ 526
NYVIQ
Sbjct: 669 NYVIQ 673
>gi|258570377|ref|XP_002543992.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904262|gb|EEP78663.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 877
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 158/329 (48%), Gaps = 18/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 496 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 555
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L ++ +L + + G RV+QK L + + +QQ+ +V
Sbjct: 556 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKAL--------EHVLLDQQAAIV 604
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + K +GNHVI++ +++ P + + ++ + A GC ++Q +
Sbjct: 605 KELEHHVIKCVKDQNGNHVIQKAIERVPQAHIQFIINDFKGQIQRWAVHSYGCRVIQRML 664
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EE + ++A++ + L +GNYV+Q+++ + A ++A + S
Sbjct: 665 EHCDEEDREAILAELHVCSGNLISDQFGNYVIQHVIENGKEKDRAQMIAVVISDLVTYSK 724
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-----RHPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K +E G I I R ++ L+ D +GNYV+Q V +G
Sbjct: 725 HKFASNVVEKT-IEFGRNSDRLDILRIFTTLDERGDPLLDLMRDQFGNYVVQKVLQVLKG 783
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
QTL D ++ L+ +GK + A
Sbjct: 784 DEY-QTLVDHILPLLCQLKKFSFGKQIAA 811
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 171/356 (48%), Gaps = 34/356 (9%)
Query: 190 TNNASPSYSNLSHGFLSDHHHLGSSTNASSR---YNNFYARARHHHHRTSYSSIE----E 242
T + PS++ S+G + G+ NASS N+ Y R+++ E +
Sbjct: 422 TQSTRPSHAAPSNG----NKRKGNPRNASSSGKGTNHIYRSPLLEEIRSNFKGKEYFLKD 477
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
+ G + KD+ G RF+Q+K+ E + + E+I +E+ D ++LM N++IQK
Sbjct: 478 IYGHAVEFTKDQHGSRFIQQKLPESSDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEH 537
Query: 303 LNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSAL 362
+ Q L+ ++ + + G RV+Q+ L+A + + Q+ +E L
Sbjct: 538 GSPIQKKILLDCMIG---HIYELSLQTFGCRVVQRALEAIDLDGQIQIIEE--------L 586
Query: 363 KNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLA 422
K+ + +K +GNHVI++ ++ P D + +LE + L+T GC ++Q + +
Sbjct: 587 KDYILVCAKDQNGNHVIQKSIETIPFDRIEFVLESLDNQIYHLSTHPYGCRVIQRLLEHS 646
Query: 423 QEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKC 482
E + +++ ++ + L + YGNYV+Q+ L P+ +++ + G S K
Sbjct: 647 DAEDRKKILGELNRFIFYLIQDQYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKF 706
Query: 483 SSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
+SNV++KC+ +Q I++E++ E + ++ D Y NYVIQ
Sbjct: 707 ASNVIEKCIKFGTLDQRRRILHEVMIGNEDYNVETVSDDSALALMMKDQYANYVIQ 762
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 162/344 (47%), Gaps = 25/344 (7%)
Query: 229 RHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMR 288
R H+ ++++ I+ + D+ G RF+Q+K++ N + + + E+ + +LM
Sbjct: 489 RTHNKSNKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMT 548
Query: 289 HQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQ 348
N+++QKL N+ Q L + S +L + + G RV+QK L +
Sbjct: 549 DVFGNYVVQKLFEHGNQSQKRILANQMKS---HILALSTQMYGCRVVQKAL--------E 597
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
+ +QQ+ +V L + + +GNHVI++ +++ P + + +++ N LAT
Sbjct: 598 HILTDQQAAMVKELDQHVMKCVRDQNGNHVIQKAIERVPTHHIRFIIDAFKGNVNKLATH 657
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC ++Q + + + ++ ++ L +GNYV+Q+++ + + ++
Sbjct: 658 PYGCRVIQRMLEHCETADRESILTELHVCTESLIPDQFGNYVIQHVIENGEEKDRSVMIK 717
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNY 523
+ S K +SNVV+K + E Q II + H + ++ L+ D YGNY
Sbjct: 718 SVVKNIHNFSKHKFASNVVEKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNY 777
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHM----YGKNVLA 563
VIQ +++ + ++++D L S + YGK ++A
Sbjct: 778 VIQKVLG-----QVKDSEREMIIDEIKPLLSQLKKFSYGKQIMA 816
>gi|443896502|dbj|GAC73846.1| translational repressor Pumilio/PUF3 [Pseudozyma antarctica T-34]
Length = 944
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 33/338 (9%)
Query: 227 RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHEL 286
R+RH +R + ++ G ++ + D+ G RF+Q+K+D + + + + EV+ +L
Sbjct: 579 RSRHSKNRKF--ELADIYGSVVEFSGDQHGSRFIQEKLDSASAEEKKTLFDEVLPHARQL 636
Query: 287 MRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPT 346
M N++IQK++ ++EQ L + + +L + G RV+QK D
Sbjct: 637 MTDVFGNYVIQKMLEHGDDEQRAVLAREM---EGNVLSLSLGTYGCRVVQKAFD------ 687
Query: 347 RQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLA 406
+ EQ+ L L + + + NHV+++ +++ + E + LA
Sbjct: 688 --YIAPEQREKLAKELDGHIMQCVRDQNANHVVQKVIERVDAGEVAFIPEAFVGHVAGLA 745
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
+ C +LQ E Q L+ ++ AY L +H YGNYV+Q++L P A V
Sbjct: 746 SHCYSCRVLQRAFEHCTEAQARPLLDELHHEAYALMQHQYGNYVIQWVLQRGQPNDRAQV 805
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI-------------- 512
+A++ G LS K +SNV+++ + S +++EI+ ++
Sbjct: 806 IAKIRGNVLTLSRHKFASNVIEEVIRTSSAADLDALVDEILTPKQVPSAGADAEAAQQTT 865
Query: 513 -----VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
V ++ D + NYV+Q + + G + R L + V
Sbjct: 866 KIAPAVLMMKDQFANYVLQRFLEKADGAQ-RARLVEAV 902
>gi|367007100|ref|XP_003688280.1| hypothetical protein TPHA_0N00650 [Tetrapisispora phaffii CBS 4417]
gi|357526588|emb|CCE65846.1| hypothetical protein TPHA_0N00650 [Tetrapisispora phaffii CBS 4417]
Length = 957
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 154/321 (47%), Gaps = 34/321 (10%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+++++ G + KD+ G RF+Q ++ P + E+I +++ D + EL N++IQK
Sbjct: 606 TLKDIHGHTLEFCKDQHGSRFIQHELAVVKPSEKEIIFNKIRDHILELSDDVFGNYVIQK 665
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
+E Q L+ + + +++++ + RV+Q+ L+ E +Q+ L
Sbjct: 666 FFEFGSETQRKVLVENF---RGKMIKLSMQMYACRVIQRALEFIE--------PDQKIEL 714
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V LK+ + + K +GNHVI++ ++ P +L+ + L+T GC ++Q
Sbjct: 715 VLELKDCVLPMIKDQNGNHVIQKAIEHIPISEISFILQSLTGQIYHLSTHAYGCRVIQRL 774
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK------------IPQVTADV 466
+ +E + ++ ++ L + YGNYV+QY+L K I + ++
Sbjct: 775 LEFGSKENQTAILEELFDFIPYLIQDQYGNYVIQYLLQQKEEDLEQENFSPRIKKAKQEI 834
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH-----------PEIVQL 515
+ ++ S K +SNVV+K +L +EQ I+++I+ H ++ +
Sbjct: 835 INIVSENVVDFSKHKFASNVVEKTILYGNKEQRKTILSQILPHDLKHASSLNDDDPMILM 894
Query: 516 ILDPYGNYVIQTAWDVSQGRR 536
+ D + NYV+Q V++G
Sbjct: 895 MRDQFANYVVQKLVGVTEGEE 915
>gi|342181330|emb|CCC90809.1| putative pumillio RNA binding protein 4 [Trypanosoma congolense
IL3000]
Length = 998
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 178/389 (45%), Gaps = 74/389 (19%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPI---DIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
GRI+ +A D+QGCR LQ V ER P +++ I++E++ + +M N L+QKL+
Sbjct: 516 GRIVKMASDQQGCRMLQS-VLERYPYNSQEVQCIVTELLPVITSVMTDPYGNFLVQKLLE 574
Query: 302 VL-NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVS 360
+ NEE+M L + S L + G+ +QKL+D+ ++++ ++
Sbjct: 575 IAPNEERMHLLSYYISGS---LCEVAVSPHGNYAVQKLIDSFR-------SKQEGKVVCL 624
Query: 361 ALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIP 420
AL+ + L K +G+HVI++ LQ + L + I E+ +D+ D+ GCC++Q C+
Sbjct: 625 ALQRGALWLMKDLNGSHVIQKLLQCIDQENLVFLYDIIVEHTVDVCNDKYGCCVVQKCMD 684
Query: 421 LAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGL---KIPQVTADVVAQLAGRYF-A 476
A Q R+ ++ + LS + YGNYVV +I+G+ + + AD A+ G
Sbjct: 685 HASALQLQRVKGALLPHMVPLSLNPYGNYVVTHIIGMHNSSLGRHVADEAARCVGPVLEV 744
Query: 477 LSLGKCSSNVVQKCL-------------------------------LESGEE-------- 497
L K +SNVV+K + ++SG E
Sbjct: 745 LCENKFASNVVEKIVRACSPNAKLELCNFLFKKSTISTVVPRELLCVDSGTEVHKQLQNY 804
Query: 498 --------------QSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYD 543
Q +G + I + + ++L+ YGNYV+QT V L
Sbjct: 805 CQGGMQHQSMFPQQQVSGPL--IHENTALESIVLNEYGNYVVQTMLTVLPISLELVQLLL 862
Query: 544 LVVDNSPFLQSHMYGKNVLAKVRGNKNRF 572
L+ SP + H +GK V AK+ ++R
Sbjct: 863 LLHQLSPEIMKHNFGKRVGAKMEQARDRI 891
>gi|342184121|emb|CCC93602.1| putative pumillo RNA binding protein PUF1 [Trypanosoma congolense
IL3000]
Length = 576
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V + +++++L + + ++ IC D +G RVMQK+ D + T E+
Sbjct: 154 VSEDNDLSEILLLLRAVSGKVEEICCDTNGCRVMQKIFDCLK-------TLEELEFSAQC 206
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKF-PPDYTKD-----------------LLEEIAENCL 403
+ ++L K +GNH + R L +Y L E+ E+C+
Sbjct: 207 FSDHIIALCKDVNGNHTVSRLLAAVRSANYWNSSDTDEASMQKLKRIHQVLYEKFPEHCM 266
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-------- 455
D+ +R GCC++Q C+ A E + ++ +V N L +GNYV+Q+IL
Sbjct: 267 DVCKNRQGCCIIQKCLQWAPEPYFSAVMNTIVTNTLKLVHDPFGNYVIQFILDHEREFAQ 326
Query: 456 ------GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRH 509
G + P T ++ Q+ ALS K SNV++KCL + E +++E+
Sbjct: 327 RDPAAAGNESPGYTNQIIRQMLHNVAALSCNKFCSNVIEKCLKNATPEVRQLLVDELTDP 386
Query: 510 PEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ +L+ D + NYVIQTA S + L D ++ L++ +G V AK+
Sbjct: 387 QVLPKLLTDSFANYVIQTAIVTSSEEKQFTQLRDSIMPLQKMLKNSPHGVKVEAKL 442
>gi|302692892|ref|XP_003036125.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
gi|300109821|gb|EFJ01223.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
Length = 361
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%), Gaps = 38/337 (11%)
Query: 224 FYARARHHHHRT---SYSSIEELR-------------GRIILVAKDEQGCRFLQKKVDER 267
YA RH HR+ + ++E R G I+ + D+ G RF+Q+K++
Sbjct: 1 MYAPLRHGRHRSIALRSALLDEFRANKARKWELRDIFGYIVEFSGDQHGSRFIQQKLETA 60
Query: 268 NPIDIEMILSEVI-DDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSS--QQRLLR 324
+ + +++ E++ D+ +L++ N++IQKL E T++ +V++S + +L
Sbjct: 61 STEEKQIVFDEIVPDNALQLIQDVFGNYVIQKLF-----EHGTQVQKTVLASTMEGHILP 115
Query: 325 ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQ 384
+ + G RV+QK ++ + EQQ V L+ + K +GNHVI++ ++
Sbjct: 116 LSLQMYGCRVVQKAIEC--------ILPEQQGAFVRELEAHVLKCVKDANGNHVIQKLIE 167
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEH 444
+ P D + + N DL+T GC +LQ + + L+ ++ L++
Sbjct: 168 RVPADRLQ-FVSTFRGNVYDLSTHPYGCRVLQRSLEHLPHDMTYPLMDELHKYVLNLAQD 226
Query: 445 SYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIIN 504
+GNYVVQ+++ P A V+ Q+ G+ AL+ K +SNV +K L+ + E +I+
Sbjct: 227 QFGNYVVQFVIEHGSPTDKALVLNQMRGQILALARHKFASNVCEKALVFADSETRAHLID 286
Query: 505 EIIRHPE-----IVQLILDPYGNYVIQTAWDVSQGRR 536
EI+ +V ++ D + NYV+Q A ++G +
Sbjct: 287 EIMMPTADGVSPLVIMMKDQFANYVLQRALATAEGEQ 323
>gi|340057051|emb|CCC51392.1| PUF1 [Trypanosoma vivax Y486]
Length = 575
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V ++ Q+++++L + + + IC D +GSRVMQ++LD +++ + L
Sbjct: 156 VESDSQLSEILLLLTKVKDHMSYICFDTNGSRVMQRILDC-------RVSLAEVELCAQC 208
Query: 362 LKNITVSLSKSPHGNHVIKRCLQK------------FPPDYTKDL-------LEEIAENC 402
L + L +G+H + R D K L E+ ENC
Sbjct: 209 LSGSIIELCTDINGSHTVARLFMAVRSSNYCHEGAVMDEDAAKHLERVHNILYEKFPENC 268
Query: 403 LDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------- 455
+++ +R GCC++Q C+ A E + L+ ++ N L +GNYVVQ+IL
Sbjct: 269 VEVCKNRQGCCIIQKCLLWAPEPYFSTLMDTILTNTLQLVHDPFGNYVVQFILDHDQTLS 328
Query: 456 -----GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP 510
G + P T ++ Q+ ALS K SNV++KCL + + +++E+
Sbjct: 329 QRTGGGSESPIYTNRIIRQMLHSVAALSCDKFCSNVIEKCLRNASPDVRQLLVDELTDPV 388
Query: 511 EIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ LI+D + NYVIQTA S + L D + L++ +G V AK+
Sbjct: 389 VLPTLIVDSFANYVIQTAIVTSTEEKQFAQLRDSITPLQSMLKNSPHGVKVEAKL 443
>gi|365759578|gb|EHN01360.1| Puf3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 866
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 151/314 (48%), Gaps = 28/314 (8%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 522 SLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQK 581
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
++ Q L+ + + + + RV+QK L EY + +Q+ L
Sbjct: 582 FFEFGSKIQKDALVEQF---KGHMKELSLQMYACRVIQKAL---EY-----IDSKQRIKL 630
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q
Sbjct: 631 VLELSDTVLQMIKDQNGNHVIQKAIETIPLEKLPFVLSSLTGHIYHLSTHSYGCRVIQRL 690
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAG 472
+ E + ++ ++ L + YGNYV+QYIL ++ V +++ +A
Sbjct: 691 LEFGSSEDERNILNELKDFIPYLIQDQYGNYVIQYILQQDQFTNKEMVDVKQEIIETVAS 750
Query: 473 RYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYG 521
S K +SNVV+K +L ++Q I+++I+ + ++ +I D +
Sbjct: 751 NVVEYSKHKFASNVVEKSILYGSKDQKDLIMSKILPRDKNHALNLEDDSPMILMIKDQFA 810
Query: 522 NYVIQTAWDVSQGR 535
NYVIQ +VS+G
Sbjct: 811 NYVIQKLVNVSEGE 824
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 147/299 (49%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + E+I +E+ D ELM N++IQK
Sbjct: 465 LKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKY 524
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L+ + + + + + G RV+Q+ L+A + QQ ++
Sbjct: 525 FEHGNDVQKEVLLDCM---KGHIYTLSMQMYGCRVVQRALEA--------IKVHQQISII 573
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
LK+ + +K +GNHVI++ ++K P K +LE + L+T GC ++Q +
Sbjct: 574 EELKDHILVCAKDQNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLL 633
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ + + +++ ++ + L + YGNYV+Q+IL + +++ + G S
Sbjct: 634 EYSSPDDQRKILDELNRFIFYLIQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSK 693
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ EQ I+ E++ E + ++ D Y NYVIQ
Sbjct: 694 HKFASNVIEKCIKYGDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQ 752
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S IEEL+ I++ AKD+ G +QK +++ I+ +L + + ++ L H +IQ
Sbjct: 571 SIIEELKDHILVCAKDQNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQ 630
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+L+ + + K++ + + + + D G+ VMQ +L+ G R++
Sbjct: 631 RLLEYSSPDDQRKILDEL---NRFIFYLIQDQYGNYVMQHILERGSCEDREE-------- 679
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++ + V+ SK ++VI++C++ + K +L+E+
Sbjct: 680 ILKVVLGSVVNFSKHKFASNVIEKCIKYGDFEQRKRILKEVM------------------ 721
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
+ E+ ++ D A ++ + Y NYV+Q ++
Sbjct: 722 ---IGNEDFNVEVVGDDSPLALMMKDQ-YANYVIQKLV 755
>gi|256272310|gb|EEU07294.1| Puf3p [Saccharomyces cerevisiae JAY291]
Length = 883
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 540 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 599
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 600 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 648
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 649 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 708
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 709 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 768
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 769 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 828
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 829 YVIQKLVNVSEGE 841
>gi|154343920|ref|XP_001567904.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065238|emb|CAM40666.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 818
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 137/275 (49%), Gaps = 22/275 (8%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
+TS +E+L G + AKD++G RF+Q VD +P ++++ E+ + EL+ N
Sbjct: 393 KTSQWRLEDLNGYAVEFAKDQEGSRFIQSAVDSASPESLDILFHEIFEAPLELVTDIFGN 452
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+++QKL+ N Q+T + ++ + G RV+QK ++ +
Sbjct: 453 YVLQKLLDKGNTPQLT---FAAERMCGHVVELTMQTYGCRVIQKCIEV--------MPPA 501
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC- 412
++++ LK+ + +GNHVI++C++ P ++ + ++LAT GC
Sbjct: 502 GLDIILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQQCGFIISAFSGRVMELATHAYGCR 560
Query: 413 ---CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVVA 468
C++Q+C EQ+ + +++ VL++ YGNYV+Q++L +K V A
Sbjct: 561 VIQCIMQHC-----PEQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDENKIESVYA 615
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
L ++F LS K +SNV++K S E I+
Sbjct: 616 ALKPKFFYLSKQKFASNVMEKLYARSSPENRMAIV 650
>gi|259147977|emb|CAY81226.1| Puf3p [Saccharomyces cerevisiae EC1118]
Length = 893
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 550 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 609
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 610 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 658
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 659 LELSDSVLQMIKDQNGNHVIQKAIETIPNEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 718
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 719 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 778
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 779 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 838
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 839 YVIQKLVNVSEGE 851
>gi|183233559|ref|XP_655386.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801513|gb|EAL49999.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 528
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 161/319 (50%), Gaps = 24/319 (7%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
++K+ G R +Q+ +++ + + + I + + + EL AN++IQK I + E +
Sbjct: 217 MSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESR-- 274
Query: 310 KLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+V + + +LR+ + G RV+QK ++ R+ L +E + LV +++
Sbjct: 275 ----HIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELRKSLVRCIED--- 327
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI++C++K D++ + L+ GC ++Q I +
Sbjct: 328 -----QNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCV 382
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ + ++ L+E YGNYVVQ +L P +++ Q+ G LS+GK SSNV+
Sbjct: 383 TELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVI 442
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQT---AWDVSQGRRIRQTLYDL 544
+KC + + + I+ EI ++ I+Q++ D + NYV+Q A D S+ R+ + +L
Sbjct: 443 EKCFKFATQNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSSE----REKIVEL 498
Query: 545 VVD-NSPFLQSHMYGKNVL 562
+ N L+ Y K++L
Sbjct: 499 FIKPNLTILKKVTYTKHIL 517
>gi|207343240|gb|EDZ70765.1| YLL013Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323332462|gb|EGA73870.1| Puf3p [Saccharomyces cerevisiae AWRI796]
Length = 879
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 825 YVIQKLVNVSEGE 837
>gi|151941156|gb|EDN59534.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
Length = 892
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 549 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 608
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 609 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 657
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 658 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 717
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 718 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 777
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 778 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 837
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 838 YVIQKLVNVSEGE 850
>gi|323336546|gb|EGA77812.1| Puf3p [Saccharomyces cerevisiae Vin13]
Length = 879
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 825 YVIQKLVNVSEGE 837
>gi|406698770|gb|EKD01997.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
8904]
Length = 711
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 25/329 (7%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G I A D+ G RF+Q K++ +P + + + E++ + LM N++IQKL +
Sbjct: 326 GSICEFASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGD 385
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
Q LI + + + L + + + G RVMQ L+ E ++ LV+ L
Sbjct: 386 AAQKAALIKKM---EGQALFLSNHMYGCRVMQTALE--------HARTEDRAKLVAELDG 434
Query: 365 ITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQE 424
+ KS + NHVI+R + PP + ++ + +L+T GC +LQ +
Sbjct: 435 HIIECVKSSNANHVIQRLITLDPP---RGFMDAFIGHVRELSTHPFGCRVLQKSFEVLPP 491
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYIL----GLKIPQVTADVVAQLAGRYFALSLG 480
E+ L+ ++ ++ L + +GNYVVQ ++ G K + A VA++ R F L
Sbjct: 492 EKIRPLLDEMHTCSHELMINQFGNYVVQSVITEGEGRKHDRDLA--VAEIKTRIFDLCRH 549
Query: 481 KCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQTAWDVSQGRR 536
K +SNVV+K L + +I+E+I I L+ D YGN+ +QTA ++ +
Sbjct: 550 KFASNVVEKALKHANPADKRELISEMIGDDSGENRIQTLLRDQYGNFPVQTALAEAE-KD 608
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
R L +++ P L+ G+ + ++
Sbjct: 609 QRDKLLSIIIPLMPNLRHTPCGRRLEGRI 637
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLS 442
L++F + L I + + A+D+ G +Q + A E++ ++ +++ NA+ L
Sbjct: 309 LEEFRSRKSSRLEFSIYGSICEFASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLM 368
Query: 443 EHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGI 502
+GNYV+Q + A ++ ++ G+ LS V+Q L + E +
Sbjct: 369 TDVFGNYVIQKLFEHGDAAQKAALIKKMEGQALFLSNHMYGCRVMQTALEHARTEDRAKL 428
Query: 503 INEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
+ E+ H I++ + N+VIQ + R D + + L +H +G VL
Sbjct: 429 VAELDGH--IIECVKSSNANHVIQRLITLDPPR----GFMDAFIGHVRELSTHPFGCRVL 482
Query: 563 AK 564
K
Sbjct: 483 QK 484
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ D +LM N+++QKL
Sbjct: 489 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 548
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 549 FEHGNQTQ--KKILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 597
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + + +GNHVI++ +++ P ++ + ++ LAT GC ++Q +
Sbjct: 598 KELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRML 657
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EE + ++A++ L +GNYV+Q+++ + +V + S
Sbjct: 658 EHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSK 717
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q II+ + + ++ LI D +GNYVIQ +G
Sbjct: 718 HKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKG 777
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R L + + L+ + YGK + A
Sbjct: 778 AE-RDALVEEIKPLLSQLKKYSYGKQIAA 805
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
S ++EL ++ +D+ G +QK + ER P + ++ +++ I + +L H +I
Sbjct: 595 SMVKELEHHVLRCVRDQNGNHVIQKAI-ERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 653
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
Q+++ EE ++ + +L+ D G+ V+Q +++ GE R ++ +
Sbjct: 654 QRMLEHCKEEDREAILAELHVCTAKLI---PDQFGNYVIQHVIENGEDKDRTRMV----T 706
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK----DLLEEIAEN----CLDLATD 408
+++S L ++ SK ++V+++ ++ F + + +L +N L L D
Sbjct: 707 IVMSNL----LTYSKHKFASNVVEKSIE-FGQESQRHQIISMLTSTDDNGENPLLGLIRD 761
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ G ++Q + + ++ L+ ++ L ++SYG +
Sbjct: 762 QFGNYVIQKVLCQLKGAERDALVEEIKPLLSQLKKYSYGKQIA 804
>gi|449708558|gb|EMD47999.1| pumilio, putative, partial [Entamoeba histolytica KU27]
Length = 499
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 161/319 (50%), Gaps = 24/319 (7%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
++K+ G R +Q+ +++ + + + I + + + EL AN++IQK I + E +
Sbjct: 188 MSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESR-- 245
Query: 310 KLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITV 367
+V + + +LR+ + G RV+QK ++ R+ L +E + LV +++
Sbjct: 246 ----HIVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELRKSLVRCIED--- 298
Query: 368 SLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQK 427
+GNHVI++C++K D++ + L+ GC ++Q I +
Sbjct: 299 -----QNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCV 353
Query: 428 ARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVV 487
L+ + ++ L+E YGNYVVQ +L P +++ Q+ G LS+GK SSNV+
Sbjct: 354 TELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVI 413
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQT---AWDVSQGRRIRQTLYDL 544
+KC + + + I+ EI ++ I+Q++ D + NYV+Q A D S+ R+ + +L
Sbjct: 414 EKCFKFATQNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSSE----REKIVEL 469
Query: 545 VVD-NSPFLQSHMYGKNVL 562
+ N L+ Y K++L
Sbjct: 470 FIKPNLTILKKVTYTKHIL 488
>gi|393220554|gb|EJD06040.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 154/301 (51%), Gaps = 18/301 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH-ELMRHQSANHLIQK 298
++++ G I+ + D+ G RF+Q+K++ + +++ E++ +L++ N++IQK
Sbjct: 132 LKDIFGYIVEFSGDQHGSRFIQQKLETATSDEKQIVFDEIVPGAALQLIQDVFGNYVIQK 191
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L + Q+ K IL+ + + +L + + G RV+QK ++ + EQQ+
Sbjct: 192 LFE--HGTQVQKTILA-NAMEGHILALSLQMYGCRVVQKAIEF--------VLPEQQASF 240
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHVI++ L++ P+ ++ N +L+T GC +LQ
Sbjct: 241 VKELEGHVLRCVKDANGNHVIQKLLERVSPERL-GFVQAFKGNVYELSTHPYGCRVLQRV 299
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+EEQ L+ ++ L + +GNYVVQ++L Q ++++L G+ ++
Sbjct: 300 FEHMKEEQTRPLLDELHKYTINLMQDQFGNYVVQFVLEHGPVQDRLLIISKLRGQMLQMA 359
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQ 533
K +SNV +K L+ + E ++ E+I IV ++ D Y NYV+Q A V +
Sbjct: 360 KHKFASNVCEKALVMADSENRRLLVEEMITPKADGVSPIVTMMKDQYANYVLQRALTVVE 419
Query: 534 G 534
G
Sbjct: 420 G 420
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ D +LM N+++QKL
Sbjct: 463 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 522
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 523 FEHGNQTQ--KKILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 571
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + + +GNHVI++ +++ P ++ + ++ LAT GC ++Q +
Sbjct: 572 KELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRML 631
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EE + ++A++ L +GNYV+Q+++ + +V + S
Sbjct: 632 EHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSK 691
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q II+ + + ++ LI D +GNYVIQ +G
Sbjct: 692 HKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKG 751
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R L + + L+ + YGK + A
Sbjct: 752 AE-RDALVEEIKPLLSQLKKYSYGKQIAA 779
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
S ++EL ++ +D+ G +QK + ER P + ++ +++ I + +L H +I
Sbjct: 569 SMVKELEHHVLRCVRDQNGNHVIQKAI-ERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 627
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
Q+++ EE ++ + +L+ D G+ V+Q +++ GE R ++ +
Sbjct: 628 QRMLEHCKEEDREAILAELHVCTAKLI---PDQFGNYVIQHVIENGEDKDRTRMV----T 680
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK----DLLEEIAEN----CLDLATD 408
+++S L ++ SK ++V+++ ++ F + + +L +N L L D
Sbjct: 681 IVMSNL----LTYSKHKFASNVVEKSIE-FGQESQRHQIISMLTSTDDNGENPLLGLIRD 735
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ G ++Q + + ++ L+ ++ L ++SYG +
Sbjct: 736 QFGNYVIQKVLCQLKGAERDALVEEIKPLLSQLKKYSYGKQIA 778
>gi|401886820|gb|EJT50837.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
2479]
Length = 677
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 32/361 (8%)
Query: 213 SSTNASSRYNNFYARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDI 272
SS S R F +R + Y SI E A D+ G RF+Q K++ +P +
Sbjct: 267 SSVVRSQRLEEFRSRKSSRLEFSIYGSICEF-------ASDQHGSRFIQNKLETASPEER 319
Query: 273 EMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGS 332
+ + E++ + LM N++IQKL + Q LI + + + L + + + G
Sbjct: 320 QKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKAALIKKM---EGQALFLSNHMYGC 376
Query: 333 RVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK 392
RVMQ L+ E ++ LV+ L + KS + NHVI+R + PP +
Sbjct: 377 RVMQTALE--------HARTEDRAKLVAELDGHIIECVKSSNANHVIQRLITLDPP---R 425
Query: 393 DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ 452
++ + +L+T GC +LQ + E+ L+ ++ ++ L + +GNYVVQ
Sbjct: 426 GFMDAFIGHVRELSTHPFGCRVLQKSFEVLPPEKIRPLLDEMHTCSHELMINQFGNYVVQ 485
Query: 453 YIL----GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII- 507
++ G K + A VA++ R F L K +SNVV+K L + +I+E+I
Sbjct: 486 SVITEGEGRKHDRDLA--VAEIKTRIFDLCRHKFASNVVEKALKHANPADKRELISEMIG 543
Query: 508 ---RHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
I L+ D YGN+ +QTA ++ + R L +++ P L+ G+ + +
Sbjct: 544 DDSGENRIQTLLRDQYGNFPVQTALAEAE-KDQRDKLLSIIIPLMPNLRHTPCGRRLEGR 602
Query: 565 V 565
+
Sbjct: 603 I 603
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 374 HGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIAD 433
HG+ I+ L+ P+ + + EEI N L TD G ++Q QKA LI
Sbjct: 302 HGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKAALIKK 361
Query: 434 VVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLE 493
+ A LS H YG V+Q L + A +VA+L G +++V+Q+ +
Sbjct: 362 MEGQALFLSNHMYGCRVMQTALEHARTEDRAKLVAELDGHIIECVKSSNANHVIQRLIT- 420
Query: 494 SGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQ 553
+ G ++ I H + +L P+G V+Q +++V +IR L D + S L
Sbjct: 421 --LDPPRGFMDAFIGH--VRELSTHPFGCRVLQKSFEVLPPEKIR-PLLDEMHTCSHELM 475
Query: 554 SHMYGKNVLAKV-RGNKNRFHNR 575
+ +G V+ V + R H+R
Sbjct: 476 INQFGNYVVQSVITEGEGRKHDR 498
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ D +LM N+++QKL
Sbjct: 443 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 502
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 503 FEHGNQTQ--KKILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 551
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + + +GNHVI++ +++ P ++ + ++ LAT GC ++Q +
Sbjct: 552 KELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRML 611
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+EE + ++A++ L +GNYV+Q+++ + +V + S
Sbjct: 612 EHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSK 671
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+K + E Q II+ + + ++ LI D +GNYVIQ +G
Sbjct: 672 HKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKG 731
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R L + + L+ + YGK + A
Sbjct: 732 AE-RDALVEEIKPLLSQLKKYSYGKQIAA 759
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPID-IEMILSEVIDDLHELMRHQSANHLI 296
S ++EL ++ +D+ G +QK + ER P + ++ +++ I + +L H +I
Sbjct: 549 SMVKELEHHVLRCVRDQNGNHVIQKAI-ERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 607
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
Q+++ EE ++ + +L+ D G+ V+Q +++ GE R ++ +
Sbjct: 608 QRMLEHCKEEDREAILAELHVCTAKLI---PDQFGNYVIQHVIENGEDKDRTRMV----T 660
Query: 357 LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK----DLLEEIAEN----CLDLATD 408
+++S L ++ SK ++V+++ ++ F + + +L +N L L D
Sbjct: 661 IVMSNL----LTYSKHKFASNVVEKSIE-FGQESQRHQIISMLTSTDDNGENPLLGLIRD 715
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
+ G ++Q + + ++ L+ ++ L ++SYG +
Sbjct: 716 QFGNYVIQKVLCQLKGAERDALVEEIKPLLSQLKKYSYGKQIA 758
>gi|116207968|ref|XP_001229793.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
gi|88183874|gb|EAQ91342.1| hypothetical protein CHGG_03277 [Chaetomium globosum CBS 148.51]
Length = 819
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 231 HHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQ 290
H ++ ++++ ++ + D+Q RF+Q+K++ N + + + +E+ + +LM+
Sbjct: 425 HSPKSKKWELKDIWSHVVEFSGDQQASRFIQQKLETANSDERDQVFAEIEPNAVQLMKDV 484
Query: 291 SANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQL 350
N+++QKL +Q+ K +L+ + + +++ + RV+QK + +
Sbjct: 485 FGNYVMQKLFEY--GDQVQKKVLAN-AMKGKVVDLSMQPYACRVVQKAF--------EHI 533
Query: 351 TQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRS 410
+QQ+ LV L++ + ++K HGNHVI++ + P ++ ++ + + +LA +
Sbjct: 534 LVDQQTELVKELESEVIKVAKDQHGNHVIQQAIVLVPREHIDCMMAGLNGHIYELAAHQY 593
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL 470
GC ++Q + E KA +++++ +A +L YGNYV+Q++L P+ +++ +
Sbjct: 594 GCRVVQRVLERGTETDKAAVMSELHDSAELLITDMYGNYVIQHVLEKGRPEDRGRMISVI 653
Query: 471 AGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII 507
+ LS K +SNVV+KC+L E+ I ++++
Sbjct: 654 TPQLLTLSRHKNASNVVEKCILLGTPEEQRSIRDQLM 690
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 54/299 (18%)
Query: 268 NPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICD 327
+P + L ++ + E Q A+ IQ+ + N ++ ++ + + +L++
Sbjct: 426 SPKSKKWELKDIWSHVVEFSGDQQASRFIQQKLETANSDERDQVFAEIEPNAVQLMK--- 482
Query: 328 DLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFP 387
D+ G+ VMQKL + G+ Q Q+ +L +A+K V LS P+ V+++ +
Sbjct: 483 DVFGNYVMQKLFEYGD--------QVQKKVLANAMKGKVVDLSMQPYACRVVQKAFEHIL 534
Query: 388 PDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYG 447
D +L++E+ + +A D+ +G
Sbjct: 535 VDQQTELVKELESEVIKVAKDQ------------------------------------HG 558
Query: 448 NYVVQYILGLKIPQVTAD-VVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEI 506
N+V+Q + L +P+ D ++A L G + L+ + VVQ+ L E +++E+
Sbjct: 559 NHVIQQAIVL-VPREHIDCMMAGLNGHIYELAAHQYGCRVVQRVLERGTETDKAAVMSEL 617
Query: 507 IRHPEIVQLILDPYGNYVIQTAWDVSQGR-RIRQTLYDLVVDNSPFLQSHMYGKNVLAK 564
E+ LI D YGNYVIQ + +GR R + ++ L H NV+ K
Sbjct: 618 HDSAEL--LITDMYGNYVIQHV--LEKGRPEDRGRMISVITPQLLTLSRHKNASNVVEK 672
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEH 444
K P K L++I + ++ + D+ +Q + A +++ ++ A++ NA L +
Sbjct: 424 KHSPKSKKWELKDIWSHVVEFSGDQQASRFIQQKLETANSDERDQVFAEIEPNAVQLMKD 483
Query: 445 SYGNYVVQYILGLKIPQVTADVVAQ-LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
+GNYV+Q + QV V+A + G+ LS+ + VVQK +Q T ++
Sbjct: 484 VFGNYVMQKLFEYGD-QVQKKVLANAMKGKVVDLSMQPYACRVVQKAFEHILVDQQTELV 542
Query: 504 NEIIRHPEIVQLILDPYGNYVIQTA 528
E+ E++++ D +GN+VIQ A
Sbjct: 543 KEL--ESEVIKVAKDQHGNHVIQQA 565
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++EL +I VAKD+ G +Q+ + I+ +++ + ++EL HQ ++Q++
Sbjct: 542 VKELESEVIKVAKDQHGNHVIQQAIVLVPREHIDCMMAGLNGHIYELAAHQYGCRVVQRV 601
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ E ++ + S + L+ D+ G+ V+Q +L+ G E + ++
Sbjct: 602 LERGTETDKAAVMSELHDSAELLIT---DMYGNYVIQHVLEKGR--------PEDRGRMI 650
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDL-------ATDRSGC 412
S + ++LS+ + ++V+++C+ P+ + + +++ + + DR+
Sbjct: 651 SVITPQLLTLSRHKNASNVVEKCILLGTPEEQRSIRDQLMGDDANKKLVRALQGEDRAVL 710
Query: 413 C---------LLQYCIPLAQEEQKARLIADVVANAYVLSEHSY 446
L Q Q E RL+AD A A V + HS+
Sbjct: 711 VNKLASHLQSLRQSGATNKQIEAMDRLVADSQAPASVATSHSH 753
>gi|336367609|gb|EGN95953.1| hypothetical protein SERLA73DRAFT_111921 [Serpula lacrymans var.
lacrymans S7.3]
Length = 372
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 21/313 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSANHLIQK 298
+ ++ G ++ + D+ G RF+Q+K++ + +++ E++ ++ +L++ N++IQK
Sbjct: 33 LRDIFGYVVEFSGDQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQK 92
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L + Q+ K +L+ + + +L + + G RV+QK A EY + EQQ
Sbjct: 93 LFE--HGTQVQKTVLA-NTMEGHVLPLSLQMYGCRVVQK---AVEY-----VLPEQQGAF 141
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHVI++ +++ P+ + N DL+T GC +LQ C
Sbjct: 142 VKELEPHVLKCVKDANGNHVIQKLIERVSPERLA-FINSFRGNVYDLSTHPYGCRVLQRC 200
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
E+Q L+ ++ L + +GNYVVQ++L A V+ +L G+ ++
Sbjct: 201 FEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMA 260
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVS 532
K +SNV +K L+ + + +I EI+ P+ IV ++ D + NYV+Q A V
Sbjct: 261 RHKFASNVCEKALMTADADSRRILIEEIMT-PKADGVSPIVTMMKDQFANYVLQRALGVV 319
Query: 533 QGRRIRQTLYDLV 545
+G + R+ L +LV
Sbjct: 320 EGEQ-RERLMNLV 331
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 15/245 (6%)
Query: 322 LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKR 381
++ D GSR +Q+ L+ ++E+Q + + N T+ L + GN+VI++
Sbjct: 40 VVEFSGDQHGSRFIQQKLETAT-------SEEKQLMFDEIVPNNTLQLIQDVFGNYVIQK 92
Query: 382 CLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVL 441
+ L + + L L+ GC ++Q + EQ+ + ++ +
Sbjct: 93 LFEHGTQVQKTVLANTMEGHVLPLSLQMYGCRVVQKAVEYVLPEQQGAFVKELEPHVLKC 152
Query: 442 SEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTG 501
+ + GN+V+Q ++ P+ A + G + LS V+Q+C E+Q+
Sbjct: 153 VKDANGNHVIQKLIERVSPERLA-FINSFRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRP 211
Query: 502 IINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQ--SHMYGK 559
+++E+ H ++ L+ D +GNYV+Q + + Q + L LQ H +
Sbjct: 212 LLDEL--HRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKL---RGQILQMARHKFAS 266
Query: 560 NVLAK 564
NV K
Sbjct: 267 NVCEK 271
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 168/357 (47%), Gaps = 59/357 (16%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + ++ E++ LM
Sbjct: 627 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQALALMTDVFG 686
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK + VV Q++ ++ +L G VM+ + D
Sbjct: 687 NYVIQK-------------AIEVVDLDQKI-KMVKELDG-HVMRCVRDQ----------- 720
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+GNHV+++C++ P + + ++ N + L+T GC
Sbjct: 721 ---------------------NGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGC 759
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + E + +++++ +++ +L++ YGNYV+Q++L P ++ +LA
Sbjct: 760 RVIQRVLEHCHEPDTQSKVMEEIMTTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELA 819
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G EQ ++NE++ + + ++ D + NYV+Q
Sbjct: 820 GKIVQMSQQKFASNVVEKCLTFGGPEQRELLVNEMLGTTDENEPLQAMMKDQFANYVVQK 879
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVR------GNKNRFHNRVAM 578
+ ++ R+ + + + L+ + YGK+++A+V G NR N A+
Sbjct: 880 VLETCDDQQ-RELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGGMYNREENGFAV 935
>gi|354547070|emb|CCE43803.1| hypothetical protein CPAR2_500290 [Candida parapsilosis]
Length = 800
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 167/337 (49%), Gaps = 24/337 (7%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+++SY+ ++++ G + KD+ G RF+Q K+ + + + E+I E+ D +LM
Sbjct: 472 NQSSYT-LKDIFGHGVEFTKDQHGSRFIQTKLPQSSDEEKEVIFKEICDISFDLMTDVFG 530
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQ 348
N+++QK +E+Q L+ Q++L +LS G RV+Q+ L++
Sbjct: 531 NYVMQKYFEYGSEQQKQILL-------QKMLGHIYELSLQTYGCRVVQRALES------- 576
Query: 349 QLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATD 408
L ++ Q ++ L++ + + + NHVI++ ++ D + +L+ + + L TD
Sbjct: 577 -LQEQDQLKIILELQDKVLVCATDQNSNHVIQKSIELIDFDKVRFILDVLTGHFYHLCTD 635
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
+ GC ++Q I ++ K + +V ++ L H +GNYV+Q L ++ + D+
Sbjct: 636 QYGCRVVQRLIHFGNDKDKQMIYNEVESHLGFLITHKFGNYVIQACLENQLRE--QDIFT 693
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTA 528
+ ++ + K +SNV +K + + + Q I+ ++ E+ +++ D YGNYV+Q
Sbjct: 694 TVVCKFTHFATNKYASNVCEKLVDSATQLQLQKILEVVMHGNELERIMGDEYGNYVVQKI 753
Query: 529 WDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V G + LVV L + GK + K+
Sbjct: 754 VSVLDGNSSEKK--QLVVKLQQLLSRNNSGKKSVEKI 788
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 3/227 (1%)
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
P +++ Q S + + V +K HG+ I+ L + + + + +EI + D
Sbjct: 464 PLLEEVRANQSSYTLKDIFGHGVEFTKDQHGSRFIQTKLPQSSDEEKEVIFKEICDISFD 523
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTA 464
L TD G ++Q E+QK L+ ++ + Y LS +YG VVQ L Q
Sbjct: 524 LMTDVFGNYVMQKYFEYGSEQQKQILLQKMLGHIYELSLQTYGCRVVQRALESLQEQDQL 583
Query: 465 DVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYV 524
++ +L + + + S++V+QK + ++ I++ + H L D YG V
Sbjct: 584 KIILELQDKVLVCATDQNSNHVIQKSIELIDFDKVRFILDVLTGH--FYHLCTDQYGCRV 641
Query: 525 IQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNKNR 571
+Q + +Q +Y+ V + FL +H +G V+ N+ R
Sbjct: 642 VQRLIHFGNDKD-KQMIYNEVESHLGFLITHKFGNYVIQACLENQLR 687
>gi|302307392|ref|NP_984040.2| ADL056Wp [Ashbya gossypii ATCC 10895]
gi|299788979|gb|AAS51864.2| ADL056Wp [Ashbya gossypii ATCC 10895]
gi|374107253|gb|AEY96161.1| FADL056Wp [Ashbya gossypii FDAG1]
Length = 807
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 63/342 (18%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLI 296
IEEL + +A D+ GCRFLQ+K++ E N + +++ S++ L +L+ N+LI
Sbjct: 161 IEELD--YLQLATDQYGCRFLQRKLENPAESNQVR-DLMYSQIKPYLLDLILDPFGNYLI 217
Query: 297 QKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQS 356
QKL L +Q T +I + + + I + G+R +QK++D E T++
Sbjct: 218 QKLCEYLTLDQKTSMIQDIYT---HVFEISINQYGTRSLQKIIDTTE-------TEQHID 267
Query: 357 LLVSALK------NITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATD 408
++VS N V+L +GNHVI++C+ KF P +++ I E N + ++T
Sbjct: 268 MIVSGFSQQFTSINQVVTLINDLNGNHVIQKCIFKFQPTKFDFIIDAIVEKDNIIKISTH 327
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADV 466
+ GCC+LQ + + +Q ++ ++ L +GNY++Q++ +K + ++
Sbjct: 328 KHGCCVLQKLLSVCTLQQIFKISVKIIQYLPGLINDQFGNYIIQFLFDIKELDFYLLGEI 387
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLE----------------------------SGEEQ 498
++L+ LS K SSNVV+K + + S + Q
Sbjct: 388 FSKLSHELCQLSCLKFSSNVVEKFIKKLFQIVHDSLTNPSASASPPIKVVSNGSHSYQHQ 447
Query: 499 STGIINEI---------IRHPEIVQLILDPYGNYVIQTAWDV 531
+ ++N I + LI D +GNY +QT DV
Sbjct: 448 ADDVVNVAMGILLTITDIFTANLNVLIRDNFGNYALQTLLDV 489
>gi|448514914|ref|XP_003867201.1| Puf3 protein [Candida orthopsilosis Co 90-125]
gi|380351540|emb|CCG21763.1| Puf3 protein [Candida orthopsilosis]
Length = 769
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 25/332 (7%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S++++ G + KD+ G RF+Q K+ + + + E+I E+ D +LM N+++QK
Sbjct: 445 SLKDIYGHGVEFTKDQHGSRFIQTKLPQASDEEKEVIFKEICDISFDLMTDVFGNYVMQK 504
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLS----GSRVMQKLLDAGEYPTRQQLTQE- 353
+ EQ L+ Q++L +LS G RV+Q+ L++ E P + ++ E
Sbjct: 505 YFEYGSIEQKQILL-------QKMLGHIYELSLQTYGCRVVQRALESLEEPDQLKIILEL 557
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q +LV A + NHVI++ ++ P D + + + + + L TD+ GC
Sbjct: 558 QDKVLVCATDQ---------NSNHVIQKSIELIPFDKVRFISDVLQTHFYHLCTDQYGCR 608
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGR 473
++Q I + K + ++ + L H +GNYVVQ L + + +++ + +
Sbjct: 609 VVQRLIHFGNDNDKQEIYTEIKDHVSFLITHKFGNYVVQACLENSLRE--SEIFTTVVSK 666
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+ + K +SNV +K + + + Q I+ +++ E+ +++ D YGNYV+Q V
Sbjct: 667 FTHFATNKYASNVCEKLVDLATQSQIQQILEVVMQGNELERIMGDEYGNYVVQKIVSVLD 726
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
G + LVV L + GK + K+
Sbjct: 727 GNSPDKK--KLVVKLQQLLSRNNSGKKSVEKI 756
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
P +++ Q+ + + V +K HG+ I+ L + + + + +EI + D
Sbjct: 432 PLLEEVRANQKDFSLKDIYGHGVEFTKDQHGSRFIQTKLPQASDEEKEVIFKEICDISFD 491
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVT 463
L TD G ++Q EQK L+ ++ + Y LS +YG VVQ L L+ P
Sbjct: 492 LMTDVFGNYVMQKYFEYGSIEQKQILLQKMLGHIYELSLQTYGCRVVQRALESLEEPD-Q 550
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNY 523
++ +L + + + S++V+QK +E I+++++ L D YG
Sbjct: 551 LKIILELQDKVLVCATDQNSNHVIQKS-IELIPFDKVRFISDVLQT-HFYHLCTDQYGCR 608
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
V+Q +Q +Y + D+ FL +H +G V+
Sbjct: 609 VVQRLIHFGNDND-KQEIYTEIKDHVSFLITHKFGNYVV 646
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 155/317 (48%), Gaps = 16/317 (5%)
Query: 248 ILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQ 307
+ ++K+ G R +Q+ +++ + + + I + D + EL AN++IQK + + E +
Sbjct: 212 VSMSKEHNGSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESR 271
Query: 308 MTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
+V + + +LR+ + G RV+QK A EY ++ + + LL L+
Sbjct: 272 ------HIVPQKMKGNVLRLTLHMYGCRVVQK---AVEY-----VSMKDRRLLFEELRKS 317
Query: 366 TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEE 425
V + +GNHVI++C++K D++ + L+ GC ++Q I +
Sbjct: 318 LVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYD 377
Query: 426 QKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSN 485
L+ + ++ L+E YGNYVVQ +L P +++ Q+ G LS+GK SSN
Sbjct: 378 CVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSN 437
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
V++KC + + I+ EI ++ I+Q++ D + NYV+Q + + + +
Sbjct: 438 VIEKCFKFATPNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSLEREKIVELFI 497
Query: 546 VDNSPFLQSHMYGKNVL 562
N L+ Y K++L
Sbjct: 498 KPNLSILKKVTYTKHIL 514
>gi|336380323|gb|EGO21476.1| hypothetical protein SERLADRAFT_473873 [Serpula lacrymans var.
lacrymans S7.9]
Length = 360
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 21/313 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVI-DDLHELMRHQSANHLIQK 298
+ ++ G ++ + D+ G RF+Q+K++ + +++ E++ ++ +L++ N++IQK
Sbjct: 21 LRDIFGYVVEFSGDQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQK 80
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
L + Q+ K +L+ + + +L + + G RV+QK A EY + EQQ
Sbjct: 81 LFE--HGTQVQKTVLA-NTMEGHVLPLSLQMYGCRVVQK---AVEY-----VLPEQQGAF 129
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
V L+ + K +GNHVI++ +++ P+ + N DL+T GC +LQ C
Sbjct: 130 VKELEPHVLKCVKDANGNHVIQKLIERVSPERLA-FINSFRGNVYDLSTHPYGCRVLQRC 188
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
E+Q L+ ++ L + +GNYVVQ++L A V+ +L G+ ++
Sbjct: 189 FEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMA 248
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNYVIQTAWDVS 532
K +SNV +K L+ + + +I EI+ P+ IV ++ D + NYV+Q A V
Sbjct: 249 RHKFASNVCEKALMTADADSRRILIEEIMT-PKADGVSPIVTMMKDQFANYVLQRALGVV 307
Query: 533 QGRRIRQTLYDLV 545
+G + R+ L +LV
Sbjct: 308 EGEQ-RERLMNLV 319
>gi|410077699|ref|XP_003956431.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
gi|372463015|emb|CCF57296.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
Length = 703
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 156/322 (48%), Gaps = 36/322 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH----ELMRHQSANHL 295
+EEL I +A D+ GCRFLQKK++ + + ++ + + + L+ N+L
Sbjct: 127 LEELD--YIKLATDQFGCRFLQKKLESNSITESNLVRDLMYEQIKPFFLNLVLDPFGNYL 184
Query: 296 IQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQ 355
IQKL L ++ T LI S+ + RI + G+R +QK++D + T+ L +
Sbjct: 185 IQKLCEYLTTDEKTFLINSIYP---HVFRISINQYGTRSLQKIIDTVDNETQIDLIVKGF 241
Query: 356 SLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCC 413
S +++ + V+L +GNHVI++C+ KFP ++ I E N + ++T + GCC
Sbjct: 242 SQEFTSIDQV-VTLINDLNGNHVIQKCIFKFPSSKFDFIINAIIEKNNIIAISTHKHGCC 300
Query: 414 LLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK---IPQVTADVVAQL 470
+LQ + + +Q ++ ++ L +GNY++Q++L +K + L
Sbjct: 301 VLQKLLSVCTLQQIFKISLKIIQFLSGLMNDQFGNYIIQFLLDIKELDFYFLIEIFNTLL 360
Query: 471 AGRYFALSLGKCSSNVVQKC---LLESGEEQSTG---------IINEIIRHP-EIVQ--- 514
LS K SSNV++K L ++ G IIN ++R I++
Sbjct: 361 VNDICQLSCLKFSSNVIEKYIKKLFRIIQDTINGNILPNMNDDIINNLMRIILNIIEFFT 420
Query: 515 -----LILDPYGNYVIQTAWDV 531
LI D YGNY +QT DV
Sbjct: 421 INLNILIRDNYGNYALQTLLDV 442
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 17/221 (7%)
Query: 323 LRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRC 382
+++ D G R +QK L++ T L ++ L+ +K ++L P GN++I++
Sbjct: 133 IKLATDQFGCRFLQKKLESNSI-TESNLVRD---LMYEQIKPFFLNLVLDPFGNYLIQKL 188
Query: 383 LQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYV-- 440
+ D L+ I + ++ ++ G LQ I E + LI + +
Sbjct: 189 CEYLTTDEKTFLINSIYPHVFRISINQYGTRSLQKIIDTVDNETQIDLIVKGFSQEFTSI 248
Query: 441 -----LSEHSYGNYVVQYILGLKIPQVTADVVAQL---AGRYFALSLGKCSSNVVQKCLL 492
L GN+V+Q + K P D + A+S K V+QK L
Sbjct: 249 DQVVTLINDLNGNHVIQKCI-FKFPSSKFDFIINAIIEKNNIIAISTHKHGCCVLQKLLS 307
Query: 493 ESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
+Q I +II+ + L+ D +GNY+IQ D+ +
Sbjct: 308 VCTLQQIFKISLKIIQF--LSGLMNDQFGNYIIQFLLDIKE 346
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVID--DLHELMRHQSANH 294
++SI++ ++ + D G +QK + + + I++ +I+ ++ + H+
Sbjct: 245 FTSIDQ----VVTLINDLNGNHVIQKCIFKFPSSKFDFIINAIIEKNNIIAISTHKHGCC 300
Query: 295 LIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
++QKL+ V +Q+ K+ L ++ Q L + +D G+ ++Q LLD E L +
Sbjct: 301 VLQKLLSVCTLQQIFKISLKII---QFLSGLMNDQFGNYIIQFLLDIKELDFYF-LIEIF 356
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+LLV+ + LS ++VI++ ++K + + + I N L D L
Sbjct: 357 NTLLVNDI----CQLSCLKFSSNVIEKYIKKL----FRIIQDTINGNILPNMNDDIINNL 408
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK 458
++ + +I N +L +YGNY +Q +L +K
Sbjct: 409 MRIIL---------NIIEFFTINLNILIRDNYGNYALQTLLDVK 443
>gi|320584088|gb|EFW98300.1| hypothetical protein HPODL_0192 [Ogataea parapolymorpha DL-1]
Length = 959
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 162/334 (48%), Gaps = 23/334 (6%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
+++++ G AKD+ G RF+Q+++ N D E+I +E+ + +LM N++IQK
Sbjct: 425 TLKDIYGHGYEFAKDQHGSRFIQQQLALSNDRDKEVIFNEIRNHAMDLMTDVFGNYVIQK 484
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
N+ Q + S+ S + + G RV+QK L+A L E+Q +
Sbjct: 485 YFEHGNDVQRKVMFESMRGS---FYDLSLQMYGCRVVQKGLEA--------LQLEEQLQI 533
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ L+ + L K +GNHVI++ ++ P +L+ I L+T GC ++Q
Sbjct: 534 LDELRENILLLVKDQNGNHVIQKSIECIPIAKIPFILDSIKHQIYHLSTHPYGCRVIQRL 593
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
+ + + + ++ ++ Y L + +GNYV+Q+++ + T +++ + LS
Sbjct: 594 LEFSDQTDQQFILDELKDYVYYLIQDQFGNYVIQHVVEHGSVKYTDEILQVVLENLVELS 653
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQ------LILDPYGNYVIQT 527
K +SN V+KC++ EE I EI+R H ++ + ++ DP+ NYV+Q
Sbjct: 654 KHKFASNAVEKCIIHQTEENRGKIYKEIMRDNMDPHGKLDENSCLCLMMKDPFANYVVQK 713
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNV 561
++ + + L + D + + YGK++
Sbjct: 714 LVELIDDEK-KGLLVKKIRDYLKLISKNNYGKHL 746
>gi|170596494|ref|XP_001902784.1| RE63138p [Brugia malayi]
gi|158589322|gb|EDP28367.1| RE63138p, putative [Brugia malayi]
Length = 572
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 163/341 (47%), Gaps = 22/341 (6%)
Query: 232 HHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS 291
++R + + +L ++ A+D+ G RF+Q+K++ + + + + EV LM
Sbjct: 244 NNRNPHLQLIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVF 303
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLT 351
N++IQK EQ L +V + ++ + + G RV+QK L++ E
Sbjct: 304 GNYVIQKFFEYGTNEQKNILTNAV---KGNVMSLALQMYGCRVIQKALESIE-------- 352
Query: 352 QEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD---YTKDLLEEIAEN--CLDLA 406
EQQ ++ ++ + K +GNHV+++ +++ + D L +N +L+
Sbjct: 353 PEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLS 412
Query: 407 TDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADV 466
T GC ++Q + ++QK ++ + + L YGNYV+Q+++ + +
Sbjct: 413 THPYGCRVIQRVLEHCTDDQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRI 472
Query: 467 VAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYG 521
V Q+ G + K +SNV++KCL +I E+ +P ++ ++ D +
Sbjct: 473 VNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFA 532
Query: 522 NYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVL 562
NYV+Q DV+ +R+ + + + P L+ + YGK+++
Sbjct: 533 NYVVQKMLDVAD-SALRKKMMLAIKPHIPALRKYNYGKHII 572
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 148/299 (49%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + E+I +E+ + +ELM N++IQK
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q L+ ++ + + + G RV+Q+ L+A + + Q L++
Sbjct: 476 FEYGNNTQKQVLLKFMIG---HIYELSLQMYGCRVVQRALEA--------VDLKGQILII 524
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + +K +GNHVI++ ++K P +++ + + L+T GC ++Q +
Sbjct: 525 DELRDHILVCAKDQNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLL 584
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +++ ++ ++ + L + YGNYV+Q+IL + ++ + G S
Sbjct: 585 EYADPKRQQEMLDELNRFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSK 644
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ +Q I++E++ E + ++ D Y NYVIQ
Sbjct: 645 HKFASNVIEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQ 703
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 362 LKNI---TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
LK+I V +K HG+ I++ L + + + EI E +L TD G ++Q
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
QK L+ ++ + Y LS YG VVQ L + ++ +L +
Sbjct: 476 FEYGNNTQKQVLLKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQILIIDELRDHILVCA 535
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ ++V+QK + + + T I++ + +I L PYG VIQ + + +R +
Sbjct: 536 KDQNGNHVIQKSIEKIPFSEITFIMDSL--EDQIYHLSTHPYGCRVIQRLLEYADPKRQQ 593
Query: 539 QTLYDL 544
+ L +L
Sbjct: 594 EMLDEL 599
>gi|261328601|emb|CBH11579.1| pumillio RNA binding protein 4, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1033
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 176/378 (46%), Gaps = 61/378 (16%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPI---DIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
GRI+ +A D+QGCR LQ V ER P +++ ++SE++ L ++M+ N L+QKL+
Sbjct: 539 GRIVKLAADQQGCRMLQS-VLERFPFHSSEVQKVISELLPVLTDVMKDPYGNFLVQKLLE 597
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
V +E+ +L+ +S+ L + G+ +QKL+D+ + +QE Q ++ A
Sbjct: 598 VAPDEERMRLLDYHISAS--LCDVAISPHGNYAVQKLIDS------LRSSQEVQ-VVCRA 648
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
L+ T+ L +G HVI++ LQ L + I ++ +D+ D+ GCC++Q C+
Sbjct: 649 LQRGTLQLMTDLNGGHVIQKLLQCISQKDLTFLYDVIVKDTVDVCNDKHGCCVVQKCMDH 708
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVV---AQLAGRYFA-L 477
A R ++ + LS + YGNYVV +++ + Q VV A AG L
Sbjct: 709 AINVHLQRTQKAILRHMLQLSLNPYGNYVVTHLISMCNSQSQRHVVNEAAHCAGPALELL 768
Query: 478 SLGKCSSNVVQKCL--------LE-------------------------SGEEQ------ 498
K +SNVV+K + LE GE+
Sbjct: 769 CANKFASNVVEKIVRGCAPSAKLELCRFLFNRSTINTGMSARLMGMDYVLGEQDPQQRLM 828
Query: 499 ---STGIINEIIRHPEIVQLILDPYGNYVIQTAWDV-SQGRRIRQTLYDLVVDNSPFLQS 554
+ + + + ++L+ YGNYV+QT DV + Q L+ L+ SP +
Sbjct: 829 IQPAAAFVTPYQENTALEAIVLNSYGNYVVQTMLDVLPISPELAQLLF-LLHKLSPEIMK 887
Query: 555 HMYGKNVLAKVRGNKNRF 572
H +GK + +K+ + R
Sbjct: 888 HNFGKRIASKMEQARERI 905
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 21/333 (6%)
Query: 247 IILVAKDEQGCRFLQKKVDERNPIDIEMILSEV-------IDDLHELMRHQSANHLIQKL 299
I+ D+ G R +Q + RNP I ++V I + ELM Q H+ +L
Sbjct: 177 IVNYCSDQHGSRTIQGLLRLRNPEITREIYNKVLALSSRGIAVVLELMLDQHGWHVFGEL 236
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I LN +Q+ + + + + + D GS ++K++ R L +L++
Sbjct: 237 IDALNYQQLKLITYEITKNLDNFVSLTLDTHGSNSIRKVI---RLLRRSPLV----TLVM 289
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ L+ ++ + G++ + C + + + L E E CLDLA D G L I
Sbjct: 290 NNLRAAFFTIMTNRIGSYAVSECFNQLSAEDNRLLYEAAIECCLDLAIDHEGSLALIRVI 349
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
Q Q+ RL+ + LS+ GNYVVQ ++ L P T + L G Y +SL
Sbjct: 350 NTIQGLQRYRLLDILSTYVAFLSQDPKGNYVVQKVISLNNPLFTQKICHHLRGYYGTISL 409
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-IVQLILDPYGNYVIQTAWDVSQ--GRR 536
K S++ +KCL E + +I + + + ++Q+ D +GNYVIQ A V++ G
Sbjct: 410 QKGGSHIAEKCL---DTEWKSWVIEDFLSNTNTLLQVAKDEFGNYVIQKALKVTKKSGSP 466
Query: 537 IRQTLYDLVVDNSPFLQSHMYGKNVLAKVRGNK 569
+ Q L + + LQS YG+NV + G +
Sbjct: 467 LYQKLLLRLQPHLSILQSG-YGRNVFNLITGGR 498
>gi|367003916|ref|XP_003686691.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
gi|357524993|emb|CCE64257.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
Length = 813
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 40/315 (12%)
Query: 250 VAKDEQGCRFLQKKVD---ERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEE 306
+A D+ GCRFLQKK++ E N + +++ ++ EL+ N+LIQKL +
Sbjct: 228 LATDQFGCRFLQKKLEYPAESNIVR-DLLYEDIKSIFLELVLDPFGNYLIQKLCDYFTTD 286
Query: 307 QMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNIT 366
Q T LI S+ + +I + G+R +QK++D E + L S +++ I
Sbjct: 287 QKTSLIKSIYP---HVFQISINQYGTRSLQKIIDTVENDAQIDLIIRGFSRECASINQI- 342
Query: 367 VSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI--AENCLDLATDRSGCCLLQYCIPLAQE 424
V+L +GNHVI++C+ KFP +++ I N + ++T + GCC+LQ + ++
Sbjct: 343 VTLINDLNGNHVIQKCIFKFPTTKFDFIVDAIIHKNNIVLISTHKHGCCVLQKLLGISTL 402
Query: 425 EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQLAGRYFALSLGKC 482
+ +L ++ + L +GNY+VQ++ ++ + +++ +L G L+ K
Sbjct: 403 QHIFKLSTKIIEYLHFLINDQFGNYIVQFLFDIEELDFYLLSEIYNKLVGDICNLACSKF 462
Query: 483 SSNVVQKC----------LLESGEEQST----------------GIINEIIRHPEIVQLI 516
SSNV++K L+ + ++Q+ I+N R+ + LI
Sbjct: 463 SSNVIEKFIEKLFRLLIKLITNDKKQNIKPADKDLIQVCIDIILTIVNIFTRN--LNGLI 520
Query: 517 LDPYGNYVIQTAWDV 531
D + NY +QT DV
Sbjct: 521 KDKFANYTLQTLLDV 535
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 325 ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQ 384
+ D G R +QK L EYP + ++ LL +K+I + L P GN++I++
Sbjct: 228 LATDQFGCRFLQKKL---EYPAESNIVRD---LLYEDIKSIFLELVLDPFGNYLIQKLCD 281
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLI-------ADVVAN 437
F D L++ I + ++ ++ G LQ I + + + LI +
Sbjct: 282 YFTTDQKTSLIKSIYPHVFQISINQYGTRSLQKIIDTVENDAQIDLIIRGFSRECASINQ 341
Query: 438 AYVLSEHSYGNYVVQYILGLKIPQVTADVVAQL---AGRYFALSLGKCSSNVVQKCLLES 494
L GN+V+Q + K P D + +S K V+QK L S
Sbjct: 342 IVTLINDLNGNHVIQKCI-FKFPTTKFDFIVDAIIHKNNIVLISTHKHGCCVLQKLLGIS 400
Query: 495 GEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQ-GRRIRQTLYDLVVDNSPFLQ 553
+ + +II + LI D +GNY++Q +D+ + + +Y+ +V + L
Sbjct: 401 TLQHIFKLSTKIIEYLHF--LINDQFGNYIVQFLFDIEELDFYLLSEIYNKLVGDICNLA 458
Query: 554 SHMYGKNVLAK 564
+ NV+ K
Sbjct: 459 CSKFSSNVIEK 469
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 401 NCLDLATDRSGCCLLQYCIPLAQEEQKAR--LIADVVANAYVLSEHSYGNYVVQYILGLK 458
N LATD+ GC LQ + E R L D+ + L +GNY++Q +
Sbjct: 224 NYASLATDQFGCRFLQKKLEYPAESNIVRDLLYEDIKSIFLELVLDPFGNYLIQKLCDYF 283
Query: 459 IPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQST------GIINEIIRHPEI 512
++ + F +S+ + + +QK ++++ E + G E +I
Sbjct: 284 TTDQKTSLIKSIYPHVFQISINQYGTRSLQK-IIDTVENDAQIDLIIRGFSRECASINQI 342
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD------NSPFLQSHMYGKNVLAKVR 566
V LI D GN+VIQ + T +D +VD N + +H +G VL K+
Sbjct: 343 VTLINDLNGNHVIQKCI-----FKFPTTKFDFIVDAIIHKNNIVLISTHKHGCCVLQKLL 397
Query: 567 G 567
G
Sbjct: 398 G 398
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 503 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKL 562
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 563 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 611
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q +
Sbjct: 612 KELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRML 671
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++A++ + + L +GNYV+Q+IL +++ + + S
Sbjct: 672 EHCNEGDRQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSK 731
Query: 480 GKCSSNVVQKCLLESGEEQSTGII------NEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K + E+Q I+ N+ +P ++ L+ D YGNYVIQ +
Sbjct: 732 HKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENP-LLGLMRDQYGNYVIQKVLGQLK 790
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + L+ YGK ++A
Sbjct: 791 GSE-RENLVSQIEPQLIHLKKFSYGKQIVA 819
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ ++ L H +IQ
Sbjct: 609 SMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQ 668
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ NE ++ + S L+ D G+ V+Q +L+ GE + ++ S+
Sbjct: 669 RMLEHCNEGDRQAILAELHSCSASLI---PDQFGNYVIQHILENGEEHDKVKII----SI 721
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE------EIAEN-CLDLATDRS 410
++S L + SK ++V+++ ++ D K++L+ + EN L L D+
Sbjct: 722 VISQL----LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQY 777
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
G ++Q + + ++ L++ + L + SYG +V
Sbjct: 778 GNYVIQKVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 818
>gi|427794829|gb|JAA62866.1| Putative translational repressor pumilio/puf3, partial
[Rhipicephalus pulchellus]
Length = 332
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 155/331 (46%), Gaps = 37/331 (11%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+ +L I+ ++D+ G RF+Q+K++ + +++ SE++ + LM N++IQK
Sbjct: 8 LRDLANHIVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKF 67
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ EQ L L V + +L + + G RV+QK L++ ++ +QQ +V
Sbjct: 68 FEFGSAEQKQALALKV---KGHVLPLALQMYGCRVIQKALES--------ISPDQQKEVV 116
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + K +GNHV+++C++ P + ++ L+T GC ++Q +
Sbjct: 117 KELDGHVLKCVKDQNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRIL 176
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
EQ ++ ++ + L + YG V GR LS
Sbjct: 177 EHCTGEQTGPVLEELHQHTEQLVQDQYGXAV--------------------RGRVLPLSQ 216
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVSQG 534
K +SNVV+KC+ + + +I E+ H + ++ D Y NYV+Q +V++
Sbjct: 217 HKFASNVVEKCVTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEP 276
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ R+ L + + P L+ + YGK++LAK+
Sbjct: 277 PQ-RKLLLHKIRPHVPSLRKYTYGKHILAKL 306
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 529 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKL 588
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L+ + +QQ+ +V
Sbjct: 589 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKALE--------HILTDQQASMV 637
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q +
Sbjct: 638 KELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQRML 697
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++A++ + + L +GNYV+Q+IL +++ + + S
Sbjct: 698 EHCNEGDRQAILAELHSCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSK 757
Query: 480 GKCSSNVVQKCLLESGEEQSTGII------NEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K + E+Q I+ N+ +P ++ L+ D YGNYVIQ +
Sbjct: 758 HKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENP-LLGLMRDQYGNYVIQKVLGQLK 816
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + L+ YGK ++A
Sbjct: 817 GSE-RENLVSQIEPQLIHLKKFSYGKQIVA 845
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ +H L H +IQ
Sbjct: 635 SMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQ 694
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ NE ++ + S L+ D G+ V+Q +L+ GE + ++ S+
Sbjct: 695 RMLEHCNEGDRQAILAELHSCSAGLI---PDQFGNYVIQHILENGEEHDKVKII----SI 747
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE------EIAEN-CLDLATDRS 410
++S L + SK ++V+++ ++ D K++L+ + EN L L D+
Sbjct: 748 VISQL----LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQY 803
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
G ++Q + + ++ L++ + L + SYG +V
Sbjct: 804 GNYVIQKVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 844
>gi|392595849|gb|EIW85172.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 378
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQS-- 291
+T + ++ G ++ + D+ G RF+Q+K++ + + + I E++ H L Q
Sbjct: 46 KTRKWELRDIYGYVVEFSGDQHGSRFIQQKLESASSDEKQRIFDEIVPS-HTLALSQDVF 104
Query: 292 ANHLIQKLIGVLNEEQMTKLILSVVSS--QQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
N++IQKL E T++ S +++ + +L + + G RV+QK ++
Sbjct: 105 GNYVIQKLF-----EHGTQIQKSALANTLEGHVLPLSLQMYGCRVIQKAIEF-------- 151
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDR 409
+ EQQ V L+ K +GNHVI++ +++ D + N DL+T
Sbjct: 152 ILPEQQGKFVRELEPHLARCVKDANGNHVIQKLIERVAAD-KLGFVHSFRGNVYDLSTHP 210
Query: 410 SGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQ 469
GC +LQ C+ ++ L+ ++ L + +GNYVVQ++L P + V+ +
Sbjct: 211 YGCRVLQRCLEHLPDDMTRSLMDELHKYVINLMQDQFGNYVVQFVLEKCQPHDRSLVITK 270
Query: 470 LAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------IVQLILDPYGNY 523
L G+ ++ K +SNV +K L+ + ++ +I+EII P+ IV ++ D Y NY
Sbjct: 271 LRGQLLNMARHKFASNVCEKALVTANYDERRTLIDEIIT-PKADGVSPIVSMMKDQYANY 329
Query: 524 VIQTAWDVSQG 534
V+Q A V++G
Sbjct: 330 VLQRALTVAEG 340
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 165/329 (50%), Gaps = 17/329 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ + +LM N++IQKL
Sbjct: 45 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 104
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q+ K +L+ + ++ + + G RV+QK L+ + +QQ+ LV
Sbjct: 105 FEHGN--QIQKRVLAE-QMKNHVMELSMQMYGCRVVQKALE--------HVLADQQAELV 153
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + K +GNHV+++ +++ P ++ + +++ LAT GC ++Q +
Sbjct: 154 EELRSDVLKCVKDQNGNHVVQKAIERVPTEHIQFVIDAFRGQVHVLATHPYGCRVIQRIL 213
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ +A ++ ++ A +L YGNYV Q+++ P+ A ++ + + LS
Sbjct: 214 EYCKPHDQAVVLEELHQCASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSK 273
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEII-RHPE---IVQLIL-DPYGNYVIQTAWDVSQG 534
K +SNVV+K + EQ I+ ++ H + +QL++ D YGNYVIQ +G
Sbjct: 274 HKFASNVVEKSIQFGTSEQRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLLGQLKG 333
Query: 535 RRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
R + + L+ + +GK + A
Sbjct: 334 EE-RDNFVEDMKPQLIQLKKYNFGKQIAA 361
>gi|401427766|ref|XP_003878366.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494614|emb|CBZ29916.1| putative pumilio protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 842
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+TS +E+L+G + AKD++G RF+Q D +P ++++ E+ + EL+
Sbjct: 397 QKTSQWRLEDLKGYAVEFAKDQEGSRFIQSAADTASPESLDVLFHEIFESPLELVTDIFG 456
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QKL+ N Q+T + ++ + G RV+QK ++ + +
Sbjct: 457 NYVLQKLLDKGNTPQLTFAAERMCG---HVVELTMQTYGCRVIQKCIEV--------MPE 505
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++++ LK+ + +GNHVI++C++ P ++ + ++LAT GC
Sbjct: 506 AGLDIILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGC 564
Query: 413 ----CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVV 467
C++Q+C EQ+ + +++ VL++ YGNYV+Q++L +K V
Sbjct: 565 RVIQCIMQHC-----PEQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVY 619
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLES 494
A L ++F LS K +SNV++K S
Sbjct: 620 AALKPKFFYLSKQKFASNVMEKLYARS 646
>gi|344232856|gb|EGV64729.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 782
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 147/299 (49%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + E+I +E+ +ELM N++IQK
Sbjct: 438 LKDIYGHAVEFTKDQHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELMTDVFGNYVIQKY 497
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
MT+ + + S + + + G RV+Q+ L+A L + Q ++
Sbjct: 498 ---FEHGSMTQKKILLESMLGHIYELSLQMYGCRVVQRALEA--------LELDGQIKII 546
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
+ LKN + +K +GNHVI++ +++ P + + +LE + L+T GC ++Q +
Sbjct: 547 TELKNHILICAKDQNGNHVIQKSIERIPFENVRFILEALESQVYHLSTHPYGCRVIQRLL 606
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ + +++A++ + L + YGNYV+Q+IL ++ + G S
Sbjct: 607 EHSDVADQDKILAELNRFIFYLIQDQYGNYVMQHILERGNMVDREAILKVVLGSVVNFSK 666
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ EQ I++E++ E + ++ D Y NYVIQ
Sbjct: 667 HKFASNVIEKCIKFGTFEQRKKILHEVLLGNEDLSIEDVEDDSPLALMMKDQYANYVIQ 725
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 156/331 (47%), Gaps = 21/331 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 491 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 550
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
N+ Q ++++Q + +L + + G RV+QK L + + +QQ+
Sbjct: 551 FEHGNQSQK-----KILANQMKGHILALSTQMYGCRVVQKAL--------EHILTDQQAS 597
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q
Sbjct: 598 MVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQR 657
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ E + ++ ++ A L +GNYV+Q+++G A +++ + +
Sbjct: 658 MLEHCTEPDRRAILEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVF 717
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K + ++Q I+ ++ ++ L+ D YGNYVIQ
Sbjct: 718 SKHKFASNVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQL 777
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + L+ YGK + A
Sbjct: 778 NGLE-REALVKKIEPQLTQLKKFSYGKQIAA 807
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ +H L H +IQ
Sbjct: 597 SMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQ 656
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q ++ GE + ++ S+
Sbjct: 657 RMLEHCTEPDRRAILEELHACTSSLI---PDQFGNYVIQHVIGNGEEHDKARII----SI 709
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ D ++L + L DR LL
Sbjct: 710 VISQL----LVFSKHKFASNVVEKSIEFGADDQRAEILRQ-----LTTPNDRGESPLLG- 759
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
L YGNYV+Q +LG
Sbjct: 760 -----------------------LMRDQYGNYVIQKVLG 775
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 19/330 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 529 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKL 588
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q K IL+ + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 589 FEHGNQSQ--KRILAN-QMKGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 637
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q +
Sbjct: 638 KELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRML 697
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++A++ + + L +GNYV+Q+IL +++ + + S
Sbjct: 698 EHCNEGDRQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSK 757
Query: 480 GKCSSNVVQKCLLESGEEQSTGII------NEIIRHPEIVQLILDPYGNYVIQTAWDVSQ 533
K +SNVV+K + E+Q I+ N+ +P ++ L+ D YGNYVIQ +
Sbjct: 758 HKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENP-LLGLMRDQYGNYVIQKVLGQLK 816
Query: 534 GRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + L+ YGK ++A
Sbjct: 817 GSE-RENLVSQIEPQLIHLKKFSYGKQIVA 845
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ ++ L H +IQ
Sbjct: 635 SMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQ 694
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ NE ++ + S L+ D G+ V+Q +L+ GE + ++ S+
Sbjct: 695 RMLEHCNEGDRQAILAELHSCSASLI---PDQFGNYVIQHILENGEEHDKVKII----SI 747
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE------EIAEN-CLDLATDRS 410
++S L + SK ++V+++ ++ D K++L+ + EN L L D+
Sbjct: 748 VISQL----LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQY 803
Query: 411 GCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVV 451
G ++Q + + ++ L++ + L + SYG +V
Sbjct: 804 GNYVIQKVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 844
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 163/338 (48%), Gaps = 53/338 (15%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
++T + E+ G ++ + D+ G RF+Q+K++ + M+ E++ LM
Sbjct: 627 NKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFG 686
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N++IQK + VV Q++ ++ +L G VM+ + D
Sbjct: 687 NYVIQK-------------AIEVVDLDQKI-KMVKELDG-HVMRCVRDQ----------- 720
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
+GNHV+++C++ P + + ++ N + L+T GC
Sbjct: 721 ---------------------NGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGC 759
Query: 413 CLLQYCIPLAQE-EQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLA 471
++Q + + + +++++ ++++ +L++ YGNYV+Q++L P ++ +LA
Sbjct: 760 RVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELA 819
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII----RHPEIVQLILDPYGNYVIQT 527
G+ +S K +SNVV+KCL G E+ ++NE++ + + ++ D + NYV+Q
Sbjct: 820 GKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQK 879
Query: 528 AWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
+ ++ R+ + + + L+ + YGK+++A+V
Sbjct: 880 VLETCDDQQ-RELILGRIKVHLNALKKYTYGKHIVARV 916
>gi|146097730|ref|XP_001468199.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
gi|134072566|emb|CAM71280.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
Length = 837
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+TS +++L+G + AKD++G RF+Q VD +P ++++ E+ + EL+
Sbjct: 397 QKTSQWRLDDLKGYAVEFAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFG 456
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QKL+ N Q+T + ++ + G RV+QK ++ +
Sbjct: 457 NYVLQKLLDKGNTPQLTFAAERMCG---HVVELTMQTYGCRVIQKCIEV--------MPS 505
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++++ LK+ + +GNHVI++C++ P ++ + ++LAT GC
Sbjct: 506 AGLDIILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGC 564
Query: 413 ----CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVV 467
C++Q+C EQ+ + +++ VL++ YGNYV+Q++L +K V
Sbjct: 565 RVIQCIMQHC-----PEQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVY 619
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLES 494
A L ++F LS K +SNV++K S
Sbjct: 620 AALKPKFFYLSKQKFASNVMEKLYARS 646
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 55/290 (18%)
Query: 280 IDDLH----ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
+DDL E + Q + IQ + + E + L + S L + D+ G+ V+
Sbjct: 404 LDDLKGYAVEFAKDQEGSRFIQSAVDTASPESLDVLFHEIFESP---LELVTDIFGNYVL 460
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QKLLD G P Q + + V L+ +G VI++C++ P +L
Sbjct: 461 QKLLDKGNTP--------QLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPSAGLDIIL 512
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
E+ +N D++G ++Q C+ +
Sbjct: 513 AELKDNVAKCIQDQNGNHVIQKCVEV---------------------------------- 538
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
IPQ +++ +GR L+ V+Q C+++ EQ I NE+++ ++ L
Sbjct: 539 ---IPQRCGFIISAFSGRVMELATHAYGCRVIQ-CIMQHCPEQEDTIFNELLKAVDV--L 592
Query: 516 ILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
D YGNYVIQ + +++Y + +L + NV+ K+
Sbjct: 593 AKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVMEKL 642
>gi|398021567|ref|XP_003863946.1| pumilio protein, putative [Leishmania donovani]
gi|322502180|emb|CBZ37263.1| pumilio protein, putative [Leishmania donovani]
Length = 837
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Query: 233 HRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSA 292
+TS +++L+G + AKD++G RF+Q VD +P ++++ E+ + EL+
Sbjct: 397 QKTSQWRLDDLKGYAVEFAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFG 456
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
N+++QKL+ N Q+T + ++ + G RV+QK ++ +
Sbjct: 457 NYVLQKLLDKGNTPQLT---FAAERMCGHVVELTMQTYGCRVIQKCIEV--------MPS 505
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
++++ LK+ + +GNHVI++C++ P ++ + ++LAT GC
Sbjct: 506 AGLDIILAELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGC 564
Query: 413 ----CLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVV 467
C++Q+C EQ+ + +++ VL++ YGNYV+Q++L +K V
Sbjct: 565 RVIQCIMQHC-----PEQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVY 619
Query: 468 AQLAGRYFALSLGKCSSNVVQKCLLES 494
A L ++F LS K +SNV++K S
Sbjct: 620 AALKPKFFYLSKQKFASNVMEKLYARS 646
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 55/290 (18%)
Query: 280 IDDLH----ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVM 335
+DDL E + Q + IQ + + E + L + S L + D+ G+ V+
Sbjct: 404 LDDLKGYAVEFAKDQEGSRFIQSAVDTASPESLDVLFHEIFESP---LELVTDIFGNYVL 460
Query: 336 QKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLL 395
QKLLD G P Q + + V L+ +G VI++C++ P +L
Sbjct: 461 QKLLDKGNTP--------QLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPSAGLDIIL 512
Query: 396 EEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
E+ +N D++G ++Q C+ +
Sbjct: 513 AELKDNVAKCIQDQNGNHVIQKCVEV---------------------------------- 538
Query: 456 GLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQL 515
IPQ +++ +GR L+ V+Q C+++ EQ I NE+++ ++ L
Sbjct: 539 ---IPQRCGFIISAFSGRVMELATHAYGCRVIQ-CIMQHCPEQEDTIFNELLKAVDV--L 592
Query: 516 ILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
D YGNYVIQ + +++Y + +L + NV+ K+
Sbjct: 593 AKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVMEKL 642
>gi|392297936|gb|EIW09035.1| Puf3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 879
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L + Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 825 YVIQKLVNVSEGE 837
>gi|349579714|dbj|GAA24875.1| K7_Puf3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 879
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L + Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 825 YVIQKLVNVSEGE 837
>gi|6323016|ref|NP_013088.1| Puf3p [Saccharomyces cerevisiae S288c]
gi|34922927|sp|Q07807.1|PUF3_YEAST RecName: Full=mRNA-binding protein PUF3; AltName: Full=Pumilio
homology domain family member 3
gi|1360181|emb|CAA97458.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1495211|emb|CAA62779.1| L1325 protein [Saccharomyces cerevisiae]
gi|285813409|tpg|DAA09305.1| TPA: Puf3p [Saccharomyces cerevisiae S288c]
Length = 879
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 28/313 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L + Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQTAWDVSQGR 535
YVIQ +VS+G
Sbjct: 825 YVIQKLVNVSEGE 837
>gi|157874927|ref|XP_001685873.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
gi|68128946|emb|CAJ06238.1| putative pumilio protein 6 [Leishmania major strain Friedlin]
Length = 850
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 22/260 (8%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+E+L+G + AKD++G RF+Q VD +P ++++ E+ + EL+ N+++QKL
Sbjct: 405 LEDLKGYAVEFAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKL 464
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ N Q+T + ++ + G RV+QK ++ + +L+
Sbjct: 465 LDKGNTPQLT---FAAERMCGHVVELTMQTYGCRVIQKCIEV--------MPAAGLDILL 513
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC----CLL 415
+ LK+ + +GNHVI++C++ P ++ + ++LAT GC C++
Sbjct: 514 AELKDNVAKCIQDQNGNHVIQKCVEVI-PQRCGFIISAFSGRVMELATHAYGCRVIQCIM 572
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL-GLKIPQVTADVVAQLAGRY 474
Q+C EQ+ + +++ VL++ YGNYV+Q++L +K V A L ++
Sbjct: 573 QHC-----PEQEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKF 627
Query: 475 FALSLGKCSSNVVQKCLLES 494
F LS K +SNV++K S
Sbjct: 628 FYLSKQKFASNVMEKLYARS 647
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 156/331 (47%), Gaps = 21/331 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 450 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 509
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
N+ Q ++++Q + +L + + G RV+QK L + + +QQ+
Sbjct: 510 FEHGNQSQK-----KILANQMKGHILALSTQMYGCRVVQKAL--------EHILTDQQAS 556
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q
Sbjct: 557 MVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQR 616
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ E + ++ ++ A L +GNYV+Q+++G A +++ + +
Sbjct: 617 MLEHCTEPDRRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVF 676
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K + ++Q I+ ++ ++ L+ D YGNYVIQ
Sbjct: 677 SKHKFASNVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQL 736
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
G R+ L + L+ YGK + A
Sbjct: 737 NGLE-REALVKKIEPQLTQLKKFSYGKQIAA 766
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ +H L H +IQ
Sbjct: 556 SMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQ 615
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q ++ GE + ++ S+
Sbjct: 616 RMLEHCTEPDRRAVLEELHACTSSLI---PDQFGNYVIQHVIGNGEEHDKARII----SI 668
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ D ++L + L DR LL
Sbjct: 669 VISQL----LVFSKHKFASNVVEKSIEFGADDQRAEILRQ-----LTTPNDRGESPLLG- 718
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
L YGNYV+Q +LG
Sbjct: 719 -----------------------LMRDQYGNYVIQKVLG 734
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%), Gaps = 16/287 (5%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ N + E I E+ + +LM+ N+++QK + Q+ K I
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGS--QLQKKI 92
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
L+ + +++ + + RV+QK L+ + EQQ+ L L+ + + K
Sbjct: 93 LAE-KMKGKVVDLSVQVYACRVVQKALE--------HILVEQQAELTRELEPEILRVIKD 143
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHV+++ ++ P Y ++ + LA+ GC ++Q + EE KA ++
Sbjct: 144 QNGNHVVQKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMG 203
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
++ A+A +L YGNYV Q+++ + ++ + G+ LS K +SNVV+KC+
Sbjct: 204 ELHASAQILITDQYGNYVAQHVIQNGELEDRERIIQLVMGQLLTLSKHKFASNVVEKCIE 263
Query: 493 ESGEEQSTGIINEIIRH-PE----IVQLILDPYGNYVIQTAWDVSQG 534
Q T I ++ P+ + Q++ D +GNYVIQ QG
Sbjct: 264 FGTPAQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKMLGQLQG 310
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI-- 300
+RG++ +A GCR +Q+ ++ D I+ E+ L+ Q N++ Q +I
Sbjct: 169 VRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHASAQILITDQYGNYVAQHVIQN 228
Query: 301 GVLNE-EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
G L + E++ +L++ +LL + S V++K ++ G P ++ +EQ +
Sbjct: 229 GELEDRERIIQLVMG------QLLTLSKHKFASNVVEKCIEFG-TPAQRTTIREQLTTAG 281
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
N + + GN+VI++ L + + L+EEI
Sbjct: 282 PDGNNPLQQMMRDQFGNYVIQKMLGQLQGEERDALVEEI 320
>gi|156845539|ref|XP_001645660.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
gi|156116326|gb|EDO17802.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
Length = 756
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 178/385 (46%), Gaps = 64/385 (16%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDD-----LHELMRHQSAN 293
SI L + +A D+ GCRFLQKK++ + MI+ +V+ + + +LM N
Sbjct: 108 SIPLLELDYVKLATDQYGCRFLQKKLESPSE---SMIVKDVLYEQIKPIILDLMLDPFGN 164
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
+LIQKL +N Q + +I S+ + ++ + G+R QK++D + + + +
Sbjct: 165 YLIQKLSEYINSSQRSLIIQSIYP---HVFQLSINQYGTRSFQKIIDTIDNEAQIDMIIK 221
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIA--ENCLDLATDRSG 411
+ +K I V+L +GNHVI++C+ KFP ++ + +N + ++T + G
Sbjct: 222 GFEQEYTTIKQI-VTLINDLNGNHVIQKCILKFPTSKFNFIINAMVHEDNIIAISTHKHG 280
Query: 412 CCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQ--VTADVVAQ 469
CC+LQ + ++ +Q ++ +V L +GNY++Q++L ++ + +++ +
Sbjct: 281 CCVLQKLLSVSTLQQFFKISIKIVEYLPNLINDQFGNYIIQFLLDVRELDFYLVSEIYKK 340
Query: 470 LAGRYFALSLGKCSSNVVQKCL--------------LESGEEQS-------TGIINEIIR 508
+ LS K SSNV++K + ES S GI+ II
Sbjct: 341 IELSLCQLSRLKFSSNVIEKFIKKIYKVMTSYIIPRKESSSNTSDDLFISTVGILFSIID 400
Query: 509 --HPEIVQLILDPYGNYVIQTAWDVSQGRRIRQT-----------LYDLVVDNS------ 549
+ +I D YGNYV+QT DV I + LYD++++ S
Sbjct: 401 LFTNNLSNIIRDNYGNYVLQTLLDVRNYSEILKMHNVYSENEAGPLYDIILEFSNKIDNL 460
Query: 550 --------PFLQSHMYGKNVLAKVR 566
P +++ Y K + K++
Sbjct: 461 FLLTKDFLPSIKTTSYAKKIKMKIK 485
>gi|342885908|gb|EGU85860.1| hypothetical protein FOXB_03708 [Fusarium oxysporum Fo5176]
Length = 776
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 16/291 (5%)
Query: 242 ELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIG 301
E G ++ + +++ R+LQ K+ + IL E+ DD +M N+++Q LI
Sbjct: 389 EAYGHMVDASGEQESSRWLQTKLAVATNEEKTRILLEIADDARTVMICSFGNYVMQNLIE 448
Query: 302 VLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSA 361
+ + ++ + L R + G RV+QK ++ EQ LV
Sbjct: 449 YTGQGEKYHILQQMKGHVNDLAR---NKHGCRVVQKAIE--------HFLVEQNLELVQE 497
Query: 362 LKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPL 421
++ + L K GNHVI++ +Q+ P + + E+ L+L+ D GC ++Q + +
Sbjct: 498 IRPHLLDLMKHETGNHVIQKFVQELPSAHLNSFVGVAEEHALELSQDSHGCRVIQRLLEV 557
Query: 422 AQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGK 481
QEE +++ + + +L+ + +GNYVVQ I+ + +V + + S K
Sbjct: 558 CQEEDIRKVLDPLYPSMEMLATNQFGNYVVQAIIEHRPGNDRDRIVEMVINKLLYFSKNK 617
Query: 482 CSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQT 527
SSNVV+KC+ +EQ T I ++ + +LI D + NYVI++
Sbjct: 618 ISSNVVEKCIAFGSDEQRTQIREQLCTVSASGKDTLFELINDQFANYVIKS 668
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 115/230 (50%), Gaps = 26/230 (11%)
Query: 237 YSSIEELRGRIILVAKDEQGCRFLQKKVD----ERNPIDIEMILSEVIDDLHELMRHQSA 292
Y +++++G + +A+++ GCR +QK ++ E+N +E++ E+ L +LM+H++
Sbjct: 456 YHILQQMKGHVNDLARNKHGCRVVQKAIEHFLVEQN---LELV-QEIRPHLLDLMKHETG 511
Query: 293 NHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQ 352
NH+IQK + L + V +++ L + D G RV+Q+LL+ + +
Sbjct: 512 NHVIQKFVQELPSAHLNSF---VGVAEEHALELSQDSHGCRVIQRLLEVCQ--------E 560
Query: 353 EQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC 412
E ++ L L+ + GN+V++ ++ P + ++E + L + ++
Sbjct: 561 EDIRKVLDPLYPSMEMLATNQFGNYVVQAIIEHRPGNDRDRIVEMVINKLLYFSKNKISS 620
Query: 413 CLLQYCIPLAQEEQKARL---IADVVANA----YVLSEHSYGNYVVQYIL 455
+++ CI +EQ+ ++ + V A+ + L + NYV++ ++
Sbjct: 621 NVVEKCIAFGSDEQRTQIREQLCTVSASGKDTLFELINDQFANYVIKSLV 670
>gi|254578844|ref|XP_002495408.1| ZYRO0B10560p [Zygosaccharomyces rouxii]
gi|238938298|emb|CAR26475.1| ZYRO0B10560p [Zygosaccharomyces rouxii]
Length = 919
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 37/346 (10%)
Query: 218 SSRYNNFYA-------RARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPI 270
S +++N+Y R + +Y I+++ G ++ +D+ G RF+Q ++ +P
Sbjct: 547 SGKWSNYYTVRSPVLDEFRSNPTDKTYK-IKDIVGYVLEFCQDQHGSRFIQYELASASPS 605
Query: 271 DIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLS 330
+ E+I +E+ D EL N++IQK ++ Q L+ Q L +
Sbjct: 606 EREVIFNEIRDQAVELSDDVFGNYVIQKFFEFGSKTQRDILVNQFKGKMQEL---SMQMY 662
Query: 331 GSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDY 390
RV+Q+ L+ E R L QE L + + K +GNHVI++ ++ P
Sbjct: 663 ACRVIQRALEFIELEQRIDLVQE--------LSTCVLEMIKDQNGNHVIQKAIESIPMTE 714
Query: 391 TKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
+L + L+T GC ++Q + E + R+ ++ L + YGNYV
Sbjct: 715 LPFILNSLDGQIYHLSTHAYGCRVIQRLLEFGSENDQTRIFREIKDFIPFLIQDQYGNYV 774
Query: 451 VQYILG-------LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGII 503
+Q++L ++ + D+V ++ S K +SNVV+K +L +Q I+
Sbjct: 775 IQHVLQQDGSNCLREMAETKQDIVNIVSQTVVEFSKHKFASNVVEKAILYGTRDQRRLIM 834
Query: 504 NEIIRHPE-----------IVQLILDPYGNYVIQTAWDVSQGRRIR 538
++++ E +V ++ D + NYV+Q VS+G R
Sbjct: 835 SKVMPSDESSAANLEENAPLVLMMRDQFANYVVQKLVGVSEGEDKR 880
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 161/331 (48%), Gaps = 21/331 (6%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ ++ + D+ G RF+Q+K++ N + E + E+ D +LM N+++QKL
Sbjct: 133 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 192
Query: 300 IGVLNEEQMTKLILSVVSSQQR--LLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
N+ Q ++++Q + +L + + G RV+QK L+ + +QQ+
Sbjct: 193 FEHGNQTQK-----KILANQMKGHILALSTQMYGCRVVQKALE--------HILTDQQAS 239
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
+V L++ + + +GNHVI++ +++ P ++ + ++ LAT GC ++Q
Sbjct: 240 MVKELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQR 299
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFAL 477
+ +EE + ++A++ L +GNYV+Q+++ + +V +
Sbjct: 300 MLEHCKEEDREAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTY 359
Query: 478 SLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNYVIQTAWDVS 532
S K +SNVV+K + E Q II+ + + ++ LI D +GNYVIQ
Sbjct: 360 SKHKFASNVVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQL 419
Query: 533 QGRRIRQTLYDLVVDNSPFLQSHMYGKNVLA 563
+G R L + + L+ + YGK + A
Sbjct: 420 KGAE-RDALVEEIKPLLSQLKKYSYGKQIAA 449
>gi|401419716|ref|XP_003874347.1| putative PUF1 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490583|emb|CBZ25844.1| putative PUF1 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 553
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 174/392 (44%), Gaps = 74/392 (18%)
Query: 243 LRGRIILVAKDEQGCRFLQK--KVDE--RNPIDIEMILS-EVIDDLHELMRHQSANHLIQ 297
LR + LV + CR++Q+ K D+ R I + + E I +L + + L+Q
Sbjct: 74 LRDALKLV----EACRYVQEYGKEDDAARQKIPFRNVFAQECIRHALDLSNDANGSELMQ 129
Query: 298 KLIGVL------------------NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL 339
L+ +L NE+ +++++L + ++ + + +G+RV Q+++
Sbjct: 130 HLVPLLRSGTKPVTMGDIFYDPTTNEQDLSEVLLLIRELSSDIVTVACNTNGARVSQRII 189
Query: 340 DAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTK------- 392
D T E+ + S L+ V ++K +GNH + + + P + +
Sbjct: 190 DV-------LCTHEEFDVYTSVLEPSIVDVAKDINGNHSLSKLITS--PRFCQLGDSDRS 240
Query: 393 ---------DLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSE 443
+ ++IA+NC+D+ +R GCC++Q C+ A + +I V+ N+ L +
Sbjct: 241 ASGAAAIYERIFQKIADNCIDICKNRQGCCIIQKCLQHAPKPYHTTIINTVLNNSLKLVQ 300
Query: 444 HSYGNYVVQYIL-------GLK-----------IPQVTADVVAQLAGRYFALSLGKCSSN 485
+GNYVVQ+IL G K P T ++ Q+ LS K SSN
Sbjct: 301 DPFGNYVVQFILDKQQDINGTKKEDTDDDAISTAPNYTNQIIRQMLHHVAELSCNKFSSN 360
Query: 486 VVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLV 545
V++KCL S + +++E+ + +L+ D + NYVIQTA + L D +
Sbjct: 361 VIEKCLKTSSPDVRQLLVDELTAPHVLPKLLTDSFANYVIQTAISTASDDGQLTQLRDAI 420
Query: 546 VDNSPFLQSHMYGKNVLAKVRGNKNRFHNRVA 577
+ L++ YG K+ +R H A
Sbjct: 421 IPLQSLLKNSPYG----VKIESKLSRRHREAA 448
>gi|150951083|ref|XP_001387330.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
gi|149388306|gb|EAZ63307.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
Length = 835
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 146/299 (48%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + + E+I +E+ D ++LM N++IQK
Sbjct: 491 LKDIYGHAVEFTKDQHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVIQKY 550
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+ Q L+ ++ + + + G RV+Q+ L+A + + Q ++
Sbjct: 551 FEHGSTTQKKVLLDYMIG---HIYELSLQMYGCRVVQRALEA--------IDLDGQIKII 599
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + +K +GNHVI++ +++ P D + +L+ + L+T GC ++Q +
Sbjct: 600 EELRDYILICAKDQNGNHVIQKSIERIPFDRIRFILDSLDNQIYHLSTHPYGCRVIQRLL 659
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
+ E + ++ ++ + L + YGNYV+Q+IL P ++ + G S
Sbjct: 660 EYSNVEDQQVILQELNRFIFYLIQDQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSK 719
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ Q I+ E++ E + ++ D Y NYVIQ
Sbjct: 720 HKFASNVIEKCIKYGTLSQRKRILREVMLGNEDFNVELVSDESPLALMMKDQYANYVIQ 778
>gi|367014775|ref|XP_003681887.1| hypothetical protein TDEL_0E04330 [Torulaspora delbrueckii]
gi|359749548|emb|CCE92676.1| hypothetical protein TDEL_0E04330 [Torulaspora delbrueckii]
Length = 589
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 152/318 (47%), Gaps = 29/318 (9%)
Query: 239 SIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQK 298
S+ ++ G ++ KD+ G RF+Q ++ + + E+I +EV D EL N++IQK
Sbjct: 244 SLNDILGYVLEFCKDQHGSRFIQHELSVVSLAEREVIFNEVRDHAIELSDDVFGNYVIQK 303
Query: 299 LIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLL 358
+ Q L+ + ++ ++ + RV+QK+L+ + P R L E S +
Sbjct: 304 FFEFGSTTQKAVLVSQF---RGKMKKLSMQMYACRVIQKVLEYIDLPQRIALVNELSSCV 360
Query: 359 VSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
+ +K+ +GNHVI++ +++ P +L+ + L+T GC ++Q
Sbjct: 361 LQMIKD--------QNGNHVIQKAIERIPMTELPFILDSLDGQIYHLSTHSYGCRVIQRL 412
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLK-------IPQVTADVVAQLA 471
+ E+ ++R++A++ + YGNYV+Q+IL K + + +V ++
Sbjct: 413 LEFGSEQDQSRILAELKDFIPYSIQDQYGNYVIQHILQQKDSESYPEMRETKQVIVKTVS 472
Query: 472 GRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPY 520
S K +SNVV+K +L Q I+++I+ E ++ ++ D +
Sbjct: 473 QNVVEFSKHKFASNVVEKAILYGSPNQKAMIVSQILPRNESHARDLEDSAPMILMMRDQF 532
Query: 521 GNYVIQTAWDVSQGRRIR 538
NYV+Q VS+G+ R
Sbjct: 533 ANYVVQKLVGVSEGQDKR 550
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 147/299 (49%), Gaps = 23/299 (7%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+K+ + + E+I +E+ + +ELM N++IQK
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N Q L+ ++ + + + G RV+Q+ L+A + + Q ++
Sbjct: 476 FEYGNNTQKQVLLKFMIG---HIYELSLQMYGCRVVQRALEA--------VDLKGQISII 524
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L++ + +K +GNHVI++ ++K P +++ + + L+T GC ++Q +
Sbjct: 525 DELRDHILVCAKDQNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLL 584
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
A +++ ++ ++ + L + YGNYV+Q+IL + ++ + G S
Sbjct: 585 EYADPKRQQEMLDELNRFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSK 644
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIRHPE------------IVQLILDPYGNYVIQ 526
K +SNV++KC+ +Q I++E++ E + ++ D Y NYVIQ
Sbjct: 645 HKFASNVIEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQ 703
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S I+ELR I++ AKD+ G +QK +++ +I I+ + D ++ L H +IQ
Sbjct: 522 SIIDELRDHILVCAKDQNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQ 581
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+L+ + ++ +++ + + + + D G+ VMQ +L+ G +++++++
Sbjct: 582 RLLEYADPKRQQEMLDEL---NRFIFYLIQDQYGNYVMQHILERGS-------SKDREAI 631
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
L L ++ V+ SK ++VI++C++ + +L+E+
Sbjct: 632 LEVVLGSV-VNFSKHKFASNVIEKCIKFGTVKQKRRILDEVM------------------ 672
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL 455
L E+ ++D A ++ + Y NYV+Q ++
Sbjct: 673 ---LGNEDPTVETVSDESPLALMMKDQ-YANYVIQKLV 706
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 362 LKNI---TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYC 418
LK+I V +K HG+ I++ L + + + EI E +L TD G ++Q
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 419 IPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALS 478
QK L+ ++ + Y LS YG VVQ L + ++ +L +
Sbjct: 476 FEYGNNTQKQVLLKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQISIIDELRDHILVCA 535
Query: 479 LGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIR 538
+ ++V+QK + + + T I++ + +I L PYG VIQ + + +R +
Sbjct: 536 KDQNGNHVIQKSIEKIPFSEITFIMDSL--EDQIYHLSTHPYGCRVIQRLLEYADPKRQQ 593
Query: 539 QTLYDL 544
+ L +L
Sbjct: 594 EMLDEL 599
>gi|298710813|emb|CBJ32228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 543
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 161/336 (47%), Gaps = 27/336 (8%)
Query: 245 GRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLN 304
G + +D+ G RF+Q+K++ D E +E++ LM N+++QKL +
Sbjct: 212 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPHTQSLMTDVFGNYVVQKLFDNGS 271
Query: 305 EEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKN 364
Q L +V +++ + G RV+QK L EY + L LVS
Sbjct: 272 SAQREALASFLVG---HAVQLSLQMYGCRVVQKAL---EYSSIDTLI-----ALVSEFCG 320
Query: 365 ITVSLSKSPHGNHVIKRCLQ----------KFPPDYTKDLLEEIAENCLDLATDRSGCCL 414
+ + +GNHV+++C++ ++ + + +++ L+ GC +
Sbjct: 321 QVMKCVQDQNGNHVVQKCIEVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRV 380
Query: 415 LQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRY 474
+Q + +EQK ++ ++ + VL + YGNYV+Q++L P ++ ++
Sbjct: 381 IQRILEHCIDEQKQVILEEIKDSFSVLIQDQYGNYVIQHVLKHGRPTDRGRLMREVKENL 440
Query: 475 FALSLGKCSSNVVQKCLLESGEEQSTGIINEII-RHPEIVQL----ILDPYGNYVIQTAW 529
+ S K +SNVV+KCL +E+ +I ++ H + L + DPY NYV+Q
Sbjct: 441 LSYSQHKFASNVVEKCLQYGTKEERGVLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKII 500
Query: 530 DVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
DV+ + RQT+ + ++ L+ + +GK++++++
Sbjct: 501 DVAD-QEQRQTIIMEIKAHAAQLKRYTFGKHIISRL 535
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 243 LRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGV 302
L G + ++ GCR +QK ++ + + ++SE + + ++ Q+ NH++QK I V
Sbjct: 282 LVGHAVQLSLQMYGCRVVQKALEYSSIDTLIALVSEFCGQVMKCVQDQNGNHVVQKCIEV 341
Query: 303 LNEEQMT---------KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++ T + I+ Q L + G RV+Q++L+ E
Sbjct: 342 VSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSM--HAYGCRVIQRILE--------HCIDE 391
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCC 413
Q+ +++ +K+ L + +GN+VI+ L+ P L+ E+ EN L + +
Sbjct: 392 QKQVILEEIKDSFSVLIQDQYGNYVIQHVLKHGRPTDRGRLMREVKENLLSYSQHKFASN 451
Query: 414 LLQYCIPLAQEEQKARLI-------ADVVANAYVLSEHSYGNYVVQYIL 455
+++ C+ +E++ LI +D + V+ Y NYVVQ I+
Sbjct: 452 VVEKCLQYGTKEERGVLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKII 500
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 11/190 (5%)
Query: 385 KFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEH 444
+ P Y + + + D+ G +Q + ++ +E K +++ + L
Sbjct: 197 RGPTGYPDPMAAGGGGHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPHTQSLMTD 256
Query: 445 SYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIIN 504
+GNYVVQ + + + L G LSL VVQK L S + +++
Sbjct: 257 VFGNYVVQKLFDNGSSAQREALASFLVGHAVQLSLQMYGCRVVQKALEYSSIDTLIALVS 316
Query: 505 EIIRHPEIVQLILDPYGNYVIQTAWDV------SQGRRIR---QTLYDLVVDNSPFLQSH 555
E ++++ + D GN+V+Q +V ++G+ + Q + D V L H
Sbjct: 317 EFC--GQVMKCVQDQNGNHVVQKCIEVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMH 374
Query: 556 MYGKNVLAKV 565
YG V+ ++
Sbjct: 375 AYGCRVIQRI 384
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
+EE++ ++ +D+ G +Q + P D ++ EV ++L +H+ A+++++K
Sbjct: 397 LEEIKDSFSVLIQDQYGNYVIQHVLKHGRPTDRGRLMREVKENLLSYSQHKFASNVVEKC 456
Query: 300 IGVLNEEQMTKLILSVV---SSQQRLLR--ICDDLSGSRVMQKLLDAGEYPTRQQLTQEQ 354
+ +E+ LI ++ S LL+ +CD + + V+QK++D + QEQ
Sbjct: 457 LQYGTKEERGVLIQHLLYGHSDGTSLLQVMVCDPYA-NYVVQKIIDVAD--------QEQ 507
Query: 355 QSLLVSALKNITVSLSKSPHGNHVIKR 381
+ ++ +K L + G H+I R
Sbjct: 508 RQTIIMEIKAHAAQLKRYTFGKHIISR 534
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 163/342 (47%), Gaps = 22/342 (6%)
Query: 234 RTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSAN 293
R + + +L ++ A+D+ G RF+Q+K++ + + + + EV LM N
Sbjct: 43 RNPHLQLIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGN 102
Query: 294 HLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQE 353
++IQK EQ L +V + ++ + + G RV+QK L++ E E
Sbjct: 103 YVIQKFFEYGTSEQKNILTNAVKGN---VMSLALQMYGCRVIQKALESIE--------PE 151
Query: 354 QQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPD---YTKDLLEEIAEN--CLDLATD 408
QQ ++ ++ + K +GNHV+++ +++ + D L +N +L+T
Sbjct: 152 QQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTH 211
Query: 409 RSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVA 468
GC ++Q + +EQK ++ + + L YGNYV+Q+++ + +V
Sbjct: 212 PYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDRDRIVN 271
Query: 469 QLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----IVQLILDPYGNY 523
Q+ G + K +SNV++KCL +I E+ +P ++ ++ D + NY
Sbjct: 272 QVKGDVLRFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATPLLMMMKDQFANY 331
Query: 524 VIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYGKNVLAKV 565
V+Q DV+ +R+ + + + P L+ + YGK+++ K+
Sbjct: 332 VVQKMLDVADS-ALRKKMMLAIKPHIPALRKYNYGKHIITKL 372
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 342 GEYPTRQQLTQEQQS-----LLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLE 396
GE TR L + ++ L + L V ++ HG+ I++ L++ + + +
Sbjct: 27 GERQTRSHLLDDFRNNRNPHLQLIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAVFD 86
Query: 397 EIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
E+A + L TD G ++Q EQK L V N L+ YG V+Q L
Sbjct: 87 EVALHAQSLMTDVFGNYVIQKFFEYGTSEQKNILTNAVKGNVMSLALQMYGCRVIQKALE 146
Query: 457 LKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEII---RHPEIV 513
P+ +++ ++ G+ + ++VVQK + + II+ ++ + +
Sbjct: 147 SIEPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVC 206
Query: 514 QLILDPYGNYVIQTAWD 530
L PYG VIQ +
Sbjct: 207 NLSTHPYGCRVIQRVLE 223
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 16/287 (5%)
Query: 253 DEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMTKLI 312
D+ G RF+Q+K++ N + E I E+ + +LM+ N++IQK + Q+ K I
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGS--QLQKKI 92
Query: 313 LSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSLSKS 372
L+ + +++ + + RV+QK L+ + EQQ+ L L+ + + K
Sbjct: 93 LAE-KMKGKVVDLSVQVYACRVVQKALE--------HILVEQQAALTRELEPEILRVIKD 143
Query: 373 PHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIA 432
+GNHV+++ ++ P + +++ + LA+ GC ++Q + E KA ++
Sbjct: 144 QNGNHVVQKIIELVPRQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMG 203
Query: 433 DVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLL 492
++ A+A +L YGNYV Q+++ P+ ++ + G+ LS K +SNVV+KC+
Sbjct: 204 ELHASAQLLITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIE 263
Query: 493 ESGEEQSTGIINEIIRH-PE----IVQLILDPYGNYVIQTAWDVSQG 534
Q T I ++ P+ + Q++ D +GNYVIQ QG
Sbjct: 264 YGTPAQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKLLGQLQG 310
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++ +RG++ +A GCR +Q+ ++ D I+ E+ L+ Q N++ Q +
Sbjct: 166 MKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQLLITDQYGNYVAQHV 225
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
I E ++I V+ +LL + S V++K ++ G P ++ +EQ +
Sbjct: 226 IQNGEPEDRERIIRLVMG---QLLTLSKHKFASNVVEKCIEYGT-PAQRTTIREQLTTAG 281
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEI 398
N + + GN+VI++ L + D + L+EEI
Sbjct: 282 PDGNNPLQQMMRDQFGNYVIQKLLGQLQGDEREALVEEI 320
>gi|363756532|ref|XP_003648482.1| hypothetical protein Ecym_8395 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891682|gb|AET41665.1| Hypothetical protein Ecym_8395 [Eremothecium cymbalariae
DBVPG#7215]
Length = 892
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 30/258 (11%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIE----MILSEVIDDLHELMRHQSANHLIQKLIGVLNE 305
+A D+ GCRFLQ+K++ NP + + ++ ++ +L+ N+LIQKL L
Sbjct: 220 LATDQYGCRFLQRKLE--NPAESDEVRDLMYKQIKPYFLDLILDPFGNYLIQKLCEYLTT 277
Query: 306 EQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNI 365
EQ T +I + S + +I + G+R +QK++D E T++ ++VS
Sbjct: 278 EQKTSMIQDIYS---HVFQISINQYGTRSLQKIIDTVE-------TEQHIDMIVSGFSQQ 327
Query: 366 ------TVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAE--NCLDLATDRSGCCLLQY 417
V+L +GNHVI++C+ KF P +++ I E N + ++T + GCC+LQ
Sbjct: 328 FTSIAQVVTLINDLNGNHVIQKCIFKFQPTKFDFIIDAIVEKDNIIKISTHKHGCCVLQK 387
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF-- 475
+ + +Q ++ ++ L +GNY++Q++ +K ++ ++ ++ G+ F
Sbjct: 388 LLSVCTLQQIFKISVKIIQYLPGLINDQFGNYIIQFLFDIK--ELDFYLLGEIFGKLFHE 445
Query: 476 --ALSLGKCSSNVVQKCL 491
LS K SSNVV+K +
Sbjct: 446 LCQLSCLKFSSNVVEKFI 463
>gi|157876447|ref|XP_001686574.1| putative PUF1 [Leishmania major strain Friedlin]
gi|68129649|emb|CAJ08955.1| putative PUF1 [Leishmania major strain Friedlin]
Length = 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 70/390 (17%)
Query: 243 LRGRIILVAKDEQGCRFLQK--KVDE--RNPIDIEMILS-EVIDDLHELMRHQSANHLIQ 297
LR + LV + CR++Q+ K D+ R I + + E I +L + + L+Q
Sbjct: 74 LRDALKLV----EACRYVQEFGKEDDAARQKIPFRNVFAQECIRHALDLSNDANGSELMQ 129
Query: 298 KLIGVL------------------NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLL 339
L+ +L NE +++++L + ++ + + +G+RV Q+++
Sbjct: 130 HLVPLLRSGTRPVTMGDIFYDPTTNEHDLSEVLLLIRELSSDIVTVACNTNGARVSQRII 189
Query: 340 DAGEYPTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQ--KFPPDYTKD---- 393
D T E+ + S L+ V ++K +GNH + + + +F D
Sbjct: 190 DV-------LCTHEEFDVYTSVLEPSIVDVAKDINGNHSLSKLITSARFCQLGDSDKSAS 242
Query: 394 --------LLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHS 445
+ ++IA+NC+D+ +R GCC++Q C+ A + +I V+ N+ L +
Sbjct: 243 GAAAIYERIFQKIADNCIDICKNRQGCCIIQKCLQHAPQPYHTTIINTVLNNSLKLVQDP 302
Query: 446 YGNYVVQYIL-------GLK-----------IPQVTADVVAQLAGRYFALSLGKCSSNVV 487
+GNYVVQ+IL G K P T ++ Q+ LS K SSNV+
Sbjct: 303 FGNYVVQFILDKQQDINGAKKEDADDDAMSTAPNYTNQIIRQMLHHVAELSCNKFSSNVI 362
Query: 488 QKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVD 547
+KCL S + +++E+ + +L+ D + NYVIQTA + L D ++
Sbjct: 363 EKCLKTSSPDVRQLLVDELTAPHVLPKLLTDSFANYVIQTAISTASDDGQLTQLRDAIIP 422
Query: 548 NSPFLQSHMYGKNVLAKVRGNKNRFHNRVA 577
L++ YG K+ +R H A
Sbjct: 423 LQSLLKNSPYG----VKIESKLSRRHREAA 448
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 141/292 (48%), Gaps = 16/292 (5%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ I+ + D+ G RF+Q ++ N + + + E+ + +LM N+++QKL
Sbjct: 538 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 597
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
N+ Q L + + +L + + G RV+QK L + + +QQ+ +V
Sbjct: 598 FEHGNQSQKKILANQM---KGHILALSTQMYGCRVVQKAL--------EHILTDQQASMV 646
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L+N + K +GNHVI++ +++ P + + ++ LA GC ++Q +
Sbjct: 647 KELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRML 706
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSL 479
E + ++ ++ A L +GNYV+Q+++G A +++ + + S
Sbjct: 707 EHCTEPDRRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSK 766
Query: 480 GKCSSNVVQKCLLESGEEQSTGIINEIIR-----HPEIVQLILDPYGNYVIQ 526
K +SNVV+K + ++Q I+ ++ ++ L+ D YGNYVIQ
Sbjct: 767 HKFASNVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQ 818
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 238 SSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQ 297
S ++EL ++ KD+ G +QK V+ + I+ I++ +H L H +IQ
Sbjct: 644 SMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQ 703
Query: 298 KLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSL 357
+++ E ++ + + L+ D G+ V+Q ++ GE + ++ S+
Sbjct: 704 RMLEHCTEPDRRAVLEELHACTSSLI---PDQFGNYVIQHVIGNGEEHDKARII----SI 756
Query: 358 LVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQY 417
++S L + SK ++V+++ ++ D ++L + L DR LL
Sbjct: 757 VISQL----LVFSKHKFASNVVEKSIEFGADDQRAEILRQ-----LTTPNDRGESPLLG- 806
Query: 418 CIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILG 456
L YGNYV+Q +LG
Sbjct: 807 -----------------------LMRDQYGNYVIQKVLG 822
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 173/368 (47%), Gaps = 58/368 (15%)
Query: 235 TSYSSIEELRGRIILVAKDEQGCRFLQKK-----VDERNPIDIEMILSEVIDDLHELMRH 289
+S + +L +I KD+ R +QK+ ++E+N I E I E ++ LM+
Sbjct: 538 SSNQNFNQLFPDLIESCKDQNSSRTIQKQFENSTIEEKNKI-FERIQPEALN----LMKD 592
Query: 290 QSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQ 349
Q N++IQKL E KL + + ++L G RV+QK L+ E R Q
Sbjct: 593 QFGNYVIQKLFEKGTIEHKEKLYYIIKGNVEQL---SLHTYGCRVIQKALE--ELKERPQ 647
Query: 350 LTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENC------- 402
+ Q L+ L N ++ + +GNHVI++C + ++ E+ +N
Sbjct: 648 M----QEGLIQELNNKIMTCIQDQNGNHVIQKCFETLSSSKLTTIINEVIQNVNLELQNK 703
Query: 403 ------------LDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYV 450
+LA GC ++Q + + ++ ++ N L E YGNY+
Sbjct: 704 YLFNKNKFYQKIEELAFHPYGCRVIQRILEFCSNPETKKIYEKLMTNLIRLCECQYGNYI 763
Query: 451 VQYILGLKIPQVTADVVAQLAGRYFA-LSLGKCSSNVVQKCLLESGEEQSTGIINEIIR- 508
+QYI+ K ++ D + Q+ +F LSL K +SNV +K ++ S EE G+++ ++R
Sbjct: 764 IQYIIE-KGQKLEKDEILQVVKVHFVDLSLNKFASNVTEKSIVYSDEEFKAGVLDVLLRP 822
Query: 509 -HPEIVQLILDPYGNYVIQTAWDVSQGR---RIRQTL------YDLVVDNSPFLQSHMYG 558
+ ++L + +GNYV+Q ++ +Q R+ Q L Y+ V+ NS +G
Sbjct: 823 NNQNHLELTKNAFGNYVVQRLYEKAQHETKLRVCQYLLQNNDVYNEVISNS-------FG 875
Query: 559 KNVLAKVR 566
K+VL+ +
Sbjct: 876 KHVLSYIE 883
>gi|323353882|gb|EGA85735.1| Puf3p [Saccharomyces cerevisiae VL3]
Length = 831
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 145/304 (47%), Gaps = 28/304 (9%)
Query: 240 IEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKL 299
++++ G + KD+ G RF+Q+++ + E+I +E+ DD EL N++IQK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 300 IGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
++ Q L+ + ++L + RV+QK L EY + Q+ LV
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQL---SLQMYACRVIQKAL---EY-----IDSNQRIELV 644
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCI 419
L + + + K +GNHVI++ ++ P + +L + + L+T GC ++Q +
Sbjct: 645 LELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLL 704
Query: 420 PLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYIL------GLKIPQVTADVVAQLAGR 473
E + ++ ++ L + YGNYV+QY+L ++ + +++ +A
Sbjct: 705 EFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANN 764
Query: 474 YFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPE-----------IVQLILDPYGN 522
S K +SNVV+K +L ++Q II++I+ + ++ +I D + N
Sbjct: 765 VVEYSKHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFAN 824
Query: 523 YVIQ 526
YVIQ
Sbjct: 825 YVIQ 828
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 395 LEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQ-- 452
L++I + L+ D+ G +Q + + +K + ++ +A LS +GNYV+Q
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 453 YILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEI 512
+ G KI + T +V Q G LSL + V+QK L Q ++ E+ +
Sbjct: 596 FEFGSKIQKNT--LVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLEL--SDSV 651
Query: 513 VQLILDPYGNYVIQTAWDVSQGRRIRQTLYDLVVDNSPFLQSHMYG 558
+Q+I D GN+VIQ A + + ++ PF+ S + G
Sbjct: 652 LQMIKDQNGNHVIQKAIET------------IPIEKLPFILSSLTG 685
>gi|67474034|ref|XP_652766.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56469651|gb|EAL47380.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702370|gb|EMD43022.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 438
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 144/281 (51%), Gaps = 15/281 (5%)
Query: 250 VAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLIGVLNEEQMT 309
+ KD+QG R +Q+ + +I+ I + D ELM N++IQKL+ ++ +
Sbjct: 125 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGTKKHVH 184
Query: 310 KLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLVSALKNITVSL 369
L + Q ++++ + G RV+QK+++ L+ E+ ++ S +K+ +
Sbjct: 185 LLFEKL---QGNVVKLSLHMYGCRVIQKIIEV--------LSPEEVRIISSEIKSNVSTF 233
Query: 370 SKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGCCLLQYCIPLAQEEQKAR 429
+ +GNHVI++ + +++EI ++ + GC ++Q I + R
Sbjct: 234 IEDQNGNHVIQKFIDFASEIDLNFMIDEIYTRAVEYSKHPYGCRVIQRLIEKNSQNCVKR 293
Query: 430 LIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYFALSLGKCSSNVVQK 489
+ +V + LS + YGNYV+Q+++ + ++V + G+ + S+ K SSNVV+K
Sbjct: 294 VTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEK 353
Query: 490 CLLESGEEQSTGIINEI----IRHPEIVQLILDPYGNYVIQ 526
C+ + T ++NE+ + + +I ++I DPY NYVIQ
Sbjct: 354 CIRCCETREQTILVNELCNSNVTNKQINEMICDPYANYVIQ 394
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 225 YARARHHHHRTSYSSIEELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLH 284
Y +H H E+L+G ++ ++ GCR +QK ++ +P ++ +I SE+ ++
Sbjct: 177 YGTKKHVHLL-----FEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVRIISSEIKSNVS 231
Query: 285 ELMRHQSANHLIQKLIGVLNEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEY 344
+ Q+ NH+IQK I +E + +I + + R + G RV+Q+L++
Sbjct: 232 TFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYT---RAVEYSKHPYGCRVIQRLIEKNSQ 288
Query: 345 PTRQQLTQEQQSLLVSALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLD 404
+++T + L LS + +GN+VI+ +Q + +++ I +
Sbjct: 289 NCVKRVTDK--------LVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYE 340
Query: 405 LATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHS-------YGNYVVQYILGL 457
+ + +++ CI + ++ L+ + + N+ V ++ Y NYV+Q ++ +
Sbjct: 341 YSMKKYSSNVVEKCIRCCETREQTILVNE-LCNSNVTNKQINEMICDPYANYVIQRLIEM 399
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 404 DLATDRSGCCLLQYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVT 463
+L D+ G +Q +A EE+ ++ + +++ L +GNYV+Q ++ +
Sbjct: 124 ELCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGTKKHV 183
Query: 464 ADVVAQLAGRYFALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHPEIVQLILDPYGNY 523
+ +L G LSL V+QK ++E + II+ I+ + I D GN+
Sbjct: 184 HLLFEKLQGNVVKLSLHMYGCRVIQK-IIEVLSPEEVRIISSEIK-SNVSTFIEDQNGNH 241
Query: 524 VIQTAWDVS 532
VIQ D +
Sbjct: 242 VIQKFIDFA 250
>gi|261333432|emb|CBH16427.1| RNA-binding regulatory protein (pumilio family),putative
[Trypanosoma brucei gambiense DAL972]
Length = 847
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+E R +++ + KD+ G R +Q+ ++ NP +IE I +EV HEL+ N+++QKL+
Sbjct: 312 DEFRLQVVSLCKDQDGSRCVQRLLN--NPENIEPIFNEVFPRTHELIIDVFGNYVLQKLL 369
Query: 301 GVL-NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+L E M K ++ VS RL + G RV+QK+L+ R+++ E + LV
Sbjct: 370 DMLPTESDMCKRLIKQVSG--RLKEYSFQMYGCRVIQKMLEKASPEKREEVLFELKDCLV 427
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC----CLL 415
+ + + NHV ++ ++ P + T+ L++ + L+ GC C+
Sbjct: 428 ECIFD--------QNANHVAQKLIEVIP-EKTQLLVDSFMPHLKALSRHPYGCRVLQCVF 478
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+ C A ++ V+ N + YGNYVVQY L ++ V QL +
Sbjct: 479 ERC-STAHGVNIRPMLEAVLENVHEYVMDQYGNYVVQYALLNAPEELRQRFVTQLIPHVY 537
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP--------EIVQLILDPYGNYVIQ 526
ALS K +SNV +K ++++ E+ ++ E + HP +V ++ D Y NYV+Q
Sbjct: 538 ALSCSKFASNVAEKTIIKANAEELQQVV-ETLTHPLGASEDGNYLVLMMQDQYANYVVQ 595
>gi|71748832|ref|XP_823471.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833139|gb|EAN78643.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 847
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 241 EELRGRIILVAKDEQGCRFLQKKVDERNPIDIEMILSEVIDDLHELMRHQSANHLIQKLI 300
+E R +++ + KD+ G R +Q+ ++ NP +IE I +EV HEL+ N+++QKL+
Sbjct: 312 DEFRLQVVSLCKDQDGSRCVQRLLN--NPENIEPIFNEVFPRTHELIIDVFGNYVLQKLL 369
Query: 301 GVL-NEEQMTKLILSVVSSQQRLLRICDDLSGSRVMQKLLDAGEYPTRQQLTQEQQSLLV 359
+L E M K ++ VS RL + G RV+QK+L+ R+++ E + LV
Sbjct: 370 DMLPTESDMCKRLIKQVSG--RLKEYSFQMYGCRVIQKMLEKASPEKREEVLFELKDCLV 427
Query: 360 SALKNITVSLSKSPHGNHVIKRCLQKFPPDYTKDLLEEIAENCLDLATDRSGC----CLL 415
+ + + NHV ++ ++ P + T+ L++ + L+ GC C+
Sbjct: 428 ECIFD--------QNANHVAQKLIEVIP-EKTQLLVDSFMPHLKALSRHPYGCRVLQCVF 478
Query: 416 QYCIPLAQEEQKARLIADVVANAYVLSEHSYGNYVVQYILGLKIPQVTADVVAQLAGRYF 475
+ C A ++ V+ N + YGNYVVQY L ++ V QL +
Sbjct: 479 ERC-STAHGVNIRPMLEAVLENVHEYVMDQYGNYVVQYALLNAPEELRQRFVTQLIPHVY 537
Query: 476 ALSLGKCSSNVVQKCLLESGEEQSTGIINEIIRHP--------EIVQLILDPYGNYVIQ 526
ALS K +SNV +K ++++ E+ ++ E + HP +V ++ D Y NYV+Q
Sbjct: 538 ALSCSKFASNVAEKTIIKANAEELQQVV-ETLTHPLGASEDGNYLVLMMQDQYANYVVQ 595
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,241,163,291
Number of Sequences: 23463169
Number of extensions: 392854015
Number of successful extensions: 1097115
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 1075276
Number of HSP's gapped (non-prelim): 4830
length of query: 579
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 431
effective length of database: 8,886,646,355
effective search space: 3830144579005
effective search space used: 3830144579005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)