BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048737
(274 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224070746|ref|XP_002303222.1| predicted protein [Populus trichocarpa]
gi|222840654|gb|EEE78201.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 216/271 (79%), Gaps = 2/271 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEG+V +A TFGEMV + W+PE++ AY++FL TL+RG Q DEA+KFLRVMKG+NC
Sbjct: 203 GWEKEGDVAKAKTTFGEMVIKVGWSPENMSAYDSFLTTLVRGSQADEAVKFLRVMKGKNC 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKFFSNALD+LVK NDSTH + LWDIMVG G L+PNLIMYNA++GL CNNNDVDN
Sbjct: 263 LPGLKFFSNALDMLVKQNDSTHAIPLWDIMVGSG--LLPNLIMYNAMIGLHCNNNDVDNA 320
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+MVF+GAFPD LT+N+IF CLIKNKKVH V FF+EMIKNE PT +C+ AI
Sbjct: 321 FRLLDEMVFNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTHFDCSAAIMT 380
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L+D +PE AIEIWNYI+EN +LPL+ SAN LL+G NLGR+S VRRFAE+ML+RRI IY
Sbjct: 381 LIDGGDPEMAIEIWNYIVENHVLPLDGSANALLIGFCNLGRMSQVRRFAEDMLDRRINIY 440
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
+ TM+KLK +F R RD++D L RRWK
Sbjct: 441 ESTMKKLKDSFDKTGRHGRDKYDCLIRRWKA 471
>gi|255557793|ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540972|gb|EEF42530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 481
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/272 (63%), Positives = 208/272 (76%), Gaps = 2/272 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEGN +A FGEMV W+PE++ AY FL L+R Q D+A FLR+MK + C
Sbjct: 212 GWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTDDAFDFLRLMKEKGC 271
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKF+S+ALD+L+K ND H V +WDIMV G LMPNL+MYN+++GLLCNNND+DN
Sbjct: 272 LPGLKFYSDALDMLLKRNDVLHAVPMWDIMVDTG--LMPNLLMYNSMIGLLCNNNDIDNA 329
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR FD MVFHGAFPD LTY MIF CL+KNKKV + +FFHEMIKNE PT L+CA AITM
Sbjct: 330 FRLFDDMVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENPPTHLDCAAAITM 389
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ D+PE AIEIWNY++++ LPL+ SAN LLVGL NLGRLS+V RFAE+ML+RRI I+
Sbjct: 390 FMGGDDPEMAIEIWNYMVDDQELPLDESANALLVGLGNLGRLSEVSRFAEDMLDRRINIH 449
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ TM KLK +FY E RS RDRFDSL R+WK S
Sbjct: 450 ESTMAKLKASFYKEGRSSRDRFDSLSRKWKAS 481
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 16 GEMVERFEW---NPEHVLAYETFLITLIRGKQVDEAL-KFLRVMKGENCFPTLKFFSNAL 71
VE F W + H ++ L+ Q+ EA+ +R MK EN ++ F++
Sbjct: 82 ASAVEFFRWAGRSGTHTPYSWNLMVDLLGKNQLFEAMWDAIRSMKQENVL-SMATFASVF 140
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN-NNDVDNVFRFFDQMVFH 130
K + + +DIM G + ++I N+++ +CN +N FFD++
Sbjct: 141 GSYCKAGSFSEAIMSFDIMDKYG--IQQDVIAVNSLLSAICNEDNQTIKAVEFFDRIKLK 198
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATA-ITMLLDADEPE 188
PD TY ++ E K + +N F EM+ + W P + A + +L+ + +
Sbjct: 199 IP-PDGDTYAILLEGWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTD 257
Query: 189 FAIEIWNYILENGILP 204
A + + E G LP
Sbjct: 258 DAFDFLRLMKEKGCLP 273
>gi|357517439|ref|XP_003629008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523030|gb|AET03484.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 214/273 (78%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEGN +A TFGEMV R W+ ++V AY+ FL+TL+R Q DE + FL+VMK +C
Sbjct: 232 GWEKEGNATKAKTTFGEMVIRVGWSQDNVAAYDAFLMTLLRALQFDEVVGFLKVMKDHDC 291
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP LKFF+NALD+LVK ND+ H + LWD+MV G L+PNLIMYNA++GLLCNN+++D+
Sbjct: 292 FPGLKFFTNALDVLVKRNDAAHAIPLWDVMVVSG--LLPNLIMYNAMIGLLCNNDEIDHA 349
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+MV HGAFPDSLTYNMIFECL+KNKKV E E FF EMIKNEW PT NCA AI M
Sbjct: 350 FRLLDEMVLHGAFPDSLTYNMIFECLVKNKKVRETERFFAEMIKNEWLPTTSNCAVAIEM 409
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + D+P+ A+EIW+Y++E + L+ SAN++L+GL L RLS+VRRFAEEML++RI IY
Sbjct: 410 LFNCDDPDAALEIWSYMVETRVRVLDVSANMVLIGLCKLKRLSEVRRFAEEMLDKRISIY 469
Query: 241 DVTMQKLKKAFYNESR--SMRDRFDSLERRWKT 271
D TM KLK+AFY ESR S RD+FD++ RRWK
Sbjct: 470 DSTMNKLKEAFYKESRSSSARDKFDAIYRRWKA 502
>gi|359474755|ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
gi|296085476|emb|CBI29208.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 167/273 (61%), Positives = 210/273 (76%), Gaps = 2/273 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWE+EGNV +A TFGEMV R W+P++++AY + L+TL+RG +V+EA+KFL VMKG+ C
Sbjct: 190 GWEREGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGC 249
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKFFSNALD+L+K NDSTH + LWDIM+ GF MPNL+MYN ++G+LCN D DN
Sbjct: 250 LPGLKFFSNALDVLLKQNDSTHAIALWDIMLDGGF--MPNLMMYNTIIGILCNAGDADNA 307
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FRF D+MVF+G F DS TYNMIF+CL+K+KKVHE FF EMIKNE P P NCA AI M
Sbjct: 308 FRFLDEMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAM 367
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D D+PE AIEIW+Y++EN + P++ SAN LL+GL NL R SD RRFAE+ML+ +I I+
Sbjct: 368 CFDGDDPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIH 427
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ TM+KLK A Y + RS RD DSL +RWK SQ
Sbjct: 428 ESTMEKLKNARYKDGRSARDTCDSLWKRWKVSQ 460
>gi|147859123|emb|CAN82548.1| hypothetical protein VITISV_005814 [Vitis vinifera]
Length = 493
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 165/270 (61%), Positives = 208/270 (77%), Gaps = 2/270 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWE+EGNV +A TFGEMV R W+P++++AY + L+TL+RG +V+EA+KFL VMKG+ C
Sbjct: 190 GWEREGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGC 249
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKFFSNALD+L+K NDSTH + LWDIM+ GF MPNL+MYN ++G+LCN D DN
Sbjct: 250 LPGLKFFSNALDVLLKQNDSTHAIALWDIMLDGGF--MPNLMMYNTIIGILCNAGDADNA 307
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FRF D+MVF+G F DS TYNMIF+CL+K+KKVHE FF EMIKNE P P NCA AI M
Sbjct: 308 FRFLDEMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAM 367
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D D+PE AIEIW+Y++EN + P++ SAN LL+GL NL R SD RRFAE+ML+ +I I+
Sbjct: 368 CFDGDDPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIH 427
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+ TM+KLK A Y + RS RD DSL +RWK
Sbjct: 428 ESTMEKLKNARYKDGRSARDTCDSLWKRWK 457
>gi|356560843|ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 488
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 165/271 (60%), Positives = 204/271 (75%), Gaps = 2/271 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEGN +A TFG+MV WN ++V AY+ FL+TL+R +D+ ++FL+VMK +C
Sbjct: 216 GWEKEGNAAKAKTTFGDMVAHIGWNKDNVAAYDAFLMTLLRAGLMDDVVRFLQVMKDHDC 275
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP LKFF+ ALD LVK ND+ H V +WD+MV L+PNLIMYNA++GLLCNN VD+
Sbjct: 276 FPGLKFFTTALDFLVKQNDADHAVPVWDVMVS--GELVPNLIMYNAMIGLLCNNAAVDHA 333
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+M FHGAFPDSLTYNMIFECL+KNKK E E FF EM+KNEW PT NCA AI M
Sbjct: 334 FRLLDEMAFHGAFPDSLTYNMIFECLVKNKKARETERFFAEMVKNEWPPTGSNCAAAIAM 393
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D D+PE A EIW+Y++EN + PL+ SAN LL+GL N+ R ++V+RFAE++L+RRI IY
Sbjct: 394 LFDCDDPEAAHEIWSYVVENRVKPLDESANALLIGLCNMSRFTEVKRFAEDILDRRINIY 453
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
TM LK AFY E RS RDR+DSL RRWK
Sbjct: 454 QSTMSILKDAFYKEGRSARDRYDSLYRRWKA 484
>gi|449519571|ref|XP_004166808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 503
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 204/274 (74%), Gaps = 2/274 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEGNV +A TF EMV+R WNPE+V +Y+ FLITL+RG + ++A+K L +K C
Sbjct: 231 GWEKEGNVEKAKVTFDEMVKRVGWNPENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRC 290
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKF SNALD L++ ND+ H + LWDI+VG G L+PNLI+YNA++GLL N+ +D+
Sbjct: 291 LPGLKFLSNALDSLIQQNDANHAILLWDIVVGSG--LVPNLIVYNAIIGLLSENSKIDDS 348
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D MVFHGAFP+SLTYN+IF LIKNKKV EV FF EM+KNE PTP +CA AITM
Sbjct: 349 FRLLDSMVFHGAFPNSLTYNLIFSSLIKNKKVKEVSQFFREMVKNECPPTPSSCAAAITM 408
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D +PE AI+IWNY+ EN I P++ SAN LL+GL NL RL++VRRFA++M+++RI I
Sbjct: 409 LFDGYDPETAIDIWNYMDENHIEPMDTSANALLIGLCNLNRLTEVRRFADDMIDQRIDIL 468
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+ TM+ LK FY + + R+ +D L RRW+ S +
Sbjct: 469 ESTMKLLKNCFYQQRGNFRENYDGLLRRWRASSI 502
>gi|449466215|ref|XP_004150822.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 204/274 (74%), Gaps = 2/274 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEKEGNV +A TF EMV+R WNPE+V +Y+ FLITL+RG + ++A+K L +K C
Sbjct: 215 GWEKEGNVEKAKVTFDEMVKRVGWNPENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRC 274
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKF SNALD L++ ND+ H + LWDI+VG G L+PNLI+YNA++GLL N+ +D+
Sbjct: 275 LPGLKFLSNALDSLIQQNDANHAILLWDIVVGSG--LVPNLIVYNAIIGLLSENSKIDDS 332
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D MVFHGAFP+SLTYN+IF LIKNKKV EV FF EM+KNE PTP +CA AITM
Sbjct: 333 FRLLDSMVFHGAFPNSLTYNLIFSSLIKNKKVKEVSQFFREMVKNECPPTPSSCAAAITM 392
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D +PE AI+IWNY+ EN I P++ SAN LL+GL NL RL++VRRFA++M+++RI I
Sbjct: 393 LFDGYDPETAIDIWNYMDENHIEPMDTSANALLIGLCNLNRLTEVRRFADDMIDQRIDIL 452
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+ TM+ LK FY + + R+ +D L RRW+ S +
Sbjct: 453 ESTMKLLKNCFYQQRGNFRENYDGLLRRWRASSI 486
>gi|226494576|ref|NP_001143685.1| uncharacterized protein LOC100276413 [Zea mays]
gi|195624570|gb|ACG34115.1| hypothetical protein [Zea mays]
Length = 467
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 167/270 (61%), Gaps = 3/270 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGN V A FGEMV R W+ +V AY++FL TL+RG +DEA KFL+VM+ + C
Sbjct: 199 AWEKEGNAVRAKSVFGEMVVRIGWDAANVSAYDSFLSTLVRGGLLDEAFKFLQVMRSKGC 258
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FFS A+D++V+ D + V +W +MV L+PN MY+A++GL CN +D+
Sbjct: 259 LPGINFFSTAVDLVVRKGDYLNAVAIWHMMVSEA-GLVPNFSMYSAMIGLHCNAGSIDDA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M +G F +S+TYN I E IK++K E E+F EM KNE PT NCA AI++
Sbjct: 318 LGLLDEMPLNGVFANSVTYNTILEGFIKHRKAREAESFLTEMSKNEQLPTASNCAAAISL 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
P AI++W I+E+ I P E SA L+ GL + GR ++V + A+EM++ R+ +
Sbjct: 378 FFKEFNPSAAIDVWRCIVEHNITPAEDSAKELIAGLLDFGRFTEVTKRADEMIDMRVELS 437
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
TM+ +K+AF R +D++ RR K
Sbjct: 438 RSTMENMKRAFAKAGR--HQSYDNIARRLK 465
>gi|223950475|gb|ACN29321.1| unknown [Zea mays]
gi|414586333|tpg|DAA36904.1| TPA: hypothetical protein ZEAMMB73_204717 [Zea mays]
Length = 468
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 165/270 (61%), Gaps = 3/270 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGN V A FGEMV R W+ +V AY++FL TL+RG +DEA KFL+VM+ + C
Sbjct: 200 AWEKEGNAVRAKSVFGEMVVRIGWDAANVSAYDSFLSTLVRGGLLDEAFKFLQVMRSKGC 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FFS A+D++V+ D + V +W +MV L+PN MY+A++GL CN +D+
Sbjct: 260 LPGINFFSTAVDLVVRKGDYLNAVAIWHMMVSEA-GLVPNFSMYSAMIGLHCNAGSIDDA 318
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M +G F +S+TYN I E IK++K E E+F EM KNE PT NCA AI++
Sbjct: 319 LGLLDEMPLNGVFANSVTYNTILEGFIKHRKAREAESFLTEMSKNEQLPTASNCAAAISL 378
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
P AI++W I+E+ I P E SA L+ GL GR ++V + A+EM++ R+ +
Sbjct: 379 FFKEFNPSAAIDVWRCIVEHNITPAEDSAKELIAGLLEFGRFTEVTKRADEMIDMRVELS 438
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
TM+ +K+ F R +D++ RR K
Sbjct: 439 RSTMENMKRGFAKAGR--HQSYDNIARRLK 466
>gi|115459468|ref|NP_001053334.1| Os04g0520900 [Oryza sativa Japonica Group]
gi|21741854|emb|CAD41444.1| OSJNBa0019D11.15 [Oryza sativa Japonica Group]
gi|113564905|dbj|BAF15248.1| Os04g0520900 [Oryza sativa Japonica Group]
gi|116310729|emb|CAH67525.1| OSIGBa0131L05.6 [Oryza sativa Indica Group]
gi|125549050|gb|EAY94872.1| hypothetical protein OsI_16672 [Oryza sativa Indica Group]
gi|125591012|gb|EAZ31362.1| hypothetical protein OsJ_15488 [Oryza sativa Japonica Group]
gi|215697100|dbj|BAG91094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 464
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 167/270 (61%), Gaps = 3/270 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGN A TFGEM+ R W+ ++ AY+ FL TL+RG Q EALKFL+VM+ + C
Sbjct: 196 AWEKEGNAQRAKSTFGEMIVRVGWDAGNMPAYDAFLSTLVRGDQFGEALKFLQVMRSKGC 255
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKFF+ A+D++V+ D +++ +W +M+ L+PNL MYNA++ L C+ D D
Sbjct: 256 LPGLKFFARAIDLVVRKRDYANSLAIWQMMISDA-GLVPNLPMYNAMIDLCCSVGDTDYA 314
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R D+M F+G F D +TYN I E LIK +K E E F EM KNE P+P NCA AI+M
Sbjct: 315 LRMLDEMPFNGVFADFITYNAILEGLIKQRKAREAEAFLAEMSKNEQLPSPTNCAAAISM 374
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
P AI++W+ I+E+ I P + SA L+VGL + GR ++V+++ +EML+ I +
Sbjct: 375 FSKEFNPSAAIDVWHCIVEHQITPADESARELIVGLLDFGRFAEVKKYTDEMLDMGIELP 434
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
T+ +K+ F + +D + RR K
Sbjct: 435 QSTIDNMKRTF--DKVGKHHTYDHIARRPK 462
>gi|242073718|ref|XP_002446795.1| hypothetical protein SORBIDRAFT_06g022830 [Sorghum bicolor]
gi|241937978|gb|EES11123.1| hypothetical protein SORBIDRAFT_06g022830 [Sorghum bicolor]
Length = 468
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 162/268 (60%), Gaps = 3/268 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
EKEGN + A FGEMV R W+ +V AY++FL TL+RG DEA KFL+VM+ + C P
Sbjct: 201 EKEGNAMRAKSVFGEMVVRVGWDAANVPAYDSFLSTLVRGGLFDEAFKFLQVMRSKGCLP 260
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+KFF+ A+D++V D + V +W++MV L+PN MYNA++GL CN +D
Sbjct: 261 GIKFFATAVDLVVLKRDYPNAVAIWNLMVSEA-GLVPNFSMYNAMIGLYCNAGAMDYALG 319
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
D+M +G F +S+TYN I E IK+ K E E F EM KNE PT NCA AI++
Sbjct: 320 MLDEMPLNGVFANSVTYNTILEGFIKHCKAREAERFLTEMSKNEQLPTASNCAAAISLFF 379
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
P AI++W I+E+ I P E SA L+ GL + GRL++V R A+EM++ R+ +
Sbjct: 380 KEFNPSAAIDVWRCIVEHNITPAEDSAKELIAGLLDFGRLTEVERRADEMIDMRVELSRS 439
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERRWK 270
TM +K+AF R +D + RR K
Sbjct: 440 TMDNMKRAFAKAQR--HQSYDRIARRLK 465
>gi|413921119|gb|AFW61051.1| hypothetical protein ZEAMMB73_101655 [Zea mays]
Length = 461
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 164/270 (60%), Gaps = 3/270 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGN V A FGEMV R W+ +V AY++FL TL+RG +DEA KFL+VM+ + C
Sbjct: 193 AWEKEGNAVRAKSVFGEMVVRIGWDAANVSAYDSFLSTLVRGGLLDEAFKFLQVMRSKGC 252
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FFS A+D++V+ D + V +W +MV L+PN MY+A++GL CN +D+
Sbjct: 253 LPGINFFSTAVDLVVRKGDYLNAVAIWHMMVSEA-GLVPNFSMYSAMIGLHCNAGSIDDA 311
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M + F +S+TY+ I E IK++K E E+F EM KNE PT NCA AI++
Sbjct: 312 LGLLDEMPLNDVFANSVTYHTILEGFIKHRKAREAESFLTEMSKNEQLPTASNCAAAISL 371
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
P +I++W I E+ I E SA L+ GL + GR ++V + A+EM++ R+ +
Sbjct: 372 FFKEFNPSASIDVWRCIEEHNITLAEDSAKELIAGLLDFGRFTEVTKRADEMIDMRVELS 431
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
TM+ +K+AF R +D++ RR K
Sbjct: 432 RSTMENMKRAFAKAGR--HQSYDNIARRLK 459
>gi|357164743|ref|XP_003580152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like isoform 1 [Brachypodium distachyon]
gi|357164746|ref|XP_003580153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like isoform 2 [Brachypodium distachyon]
Length = 465
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 161/270 (59%), Gaps = 3/270 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGNV A TFGEM+ R W+ ++ A++ FL TL+RG Q +EALKFL VM+ C
Sbjct: 197 AWEKEGNVQRAKSTFGEMIVRVGWDSRNIPAHDAFLTTLVRGDQFNEALKFLNVMRTNGC 256
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LKFF+NA+D++V+ D + + +W +MV ++PNL MYNA++ L + + D
Sbjct: 257 LPGLKFFANAIDLVVRKADYVNAIPIWQMMVSDA-GIVPNLPMYNAIIALCSSVGNTDYA 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M +G F DS+TYN I E LIK K E E F EM KNE P+ NCA AI++
Sbjct: 316 FNMLDEMPLNGVFADSVTYNAILEGLIKQCKARETEGFLMEMSKNEQLPSAPNCAAAISL 375
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
P AI++W+ I+E+ I P E SA L+ GL + R + V+ + +EML+ I +
Sbjct: 376 FSKEFNPSAAIDVWHCIVEHQITPAEESAKELITGLLDFSRFAQVKIYTDEMLDMGIELP 435
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
++K+K F + R +D + RR K
Sbjct: 436 QSIIEKMKHTFDKAGK--RQTYDQIARRLK 463
>gi|42565430|gb|AAS20986.1| pentatricopeptide repeat protein-like protein [Hyacinthus
orientalis]
Length = 236
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 129/183 (70%), Gaps = 1/183 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWEK GNV A TFGEMV R WNP ++ AY+ FL TL+R Q EA+ FLRVMK +NC
Sbjct: 6 GWEKAGNVQRAKTTFGEMVVRVGWNPSNMSAYDAFLTTLVRAGQPAEAINFLRVMKSKNC 65
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +KFFS ALDILVK ND+ H V LWD+MV L+P+ +MYNA++ L CNN D D+
Sbjct: 66 HPGIKFFSTALDILVKNNDARHAVALWDLMV-TDSGLVPDTVMYNAIIALSCNNLDFDSA 124
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+RF D M FHGAFPD +TYN IFECL++ ++ ++ FF EM +NE +P+P NC AI +
Sbjct: 125 YRFLDAMPFHGAFPDPITYNTIFECLMRGRRANDAGKFFAEMRRNEQRPSPSNCLAAIKL 184
Query: 181 LLD 183
L+
Sbjct: 185 FLE 187
>gi|356569552|ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 485
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/257 (42%), Positives = 157/257 (61%), Gaps = 2/257 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE E VV A +TF EMV W+P +V AY++FL TL+RG + EA+KF+ M+
Sbjct: 216 GWEGENGVVGAKETFAEMVIEIGWDPLNVPAYDSFLCTLVRGPDGLLEAIKFVDSMRDRR 275
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
CFP ++F ALD VK +D W+++V +G + P MYN ++GL C D D
Sbjct: 276 CFPGVRFLKAALDECVKSHDVRTAEFFWEVLV-VGKVVQPTAEMYNLMIGLCCYRGDTDA 334
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R D+MV+ GAFPD TYN++F+ LIK +K+ E F EM+KNE P NC A+
Sbjct: 335 ARRMLDEMVYQGAFPDVETYNLLFKFLIKGRKLREASVVFAEMVKNECVPEQDNCDAAVK 394
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+D EP AI++W Y++EN LE +AN L+VGLR+L RL + ++AE+M++R I +
Sbjct: 395 AYVDCGEPVMAIKVWKYLVENYKKDLERTANFLVVGLRDLNRLPEAVKYAEDMIDREIRL 454
Query: 240 YDVTMQKLKKAFYNESR 256
TM KL+++ E R
Sbjct: 455 SSNTMSKLRQSLIKERR 471
>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 158/273 (57%), Gaps = 6/273 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G E EGNV +A TFGEM+ R W P + AY FL TL+ G QV+EALKFL VMK C
Sbjct: 250 GLEIEGNVSKARTTFGEMIIRHGWLPNNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKC 309
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN--DVD 118
P L FF N L IL + D+ + LW++M G L +L YN ++G+ C+ N VD
Sbjct: 310 LPDLGFFRNTLQILYQRKDTKNAYGLWELMKQSGILL--DLPSYNTMIGVFCSANPIQVD 367
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+R D+MVF G FPD TYN IFE LI +KV E + F EM KN++ P N AI
Sbjct: 368 FAYRLLDEMVFTGIFPDFKTYNTIFEALITARKVEEASSIFREMTKNDFCPLYANYVMAI 427
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M +AD+PE A+ +W ++++ I P A +L+ G +LGR S+ +++ E + R +
Sbjct: 428 KMYFEADDPEMAVMMWKHMIQKAIFPKSDCAAILIDGFCDLGRASEALKYSLEAITRGVQ 487
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
I TM KLK A + +D + LE++ K+
Sbjct: 488 IPVETMTKLKNASRQAGK--QDAYGQLEKKMKS 518
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 154/277 (55%), Gaps = 8/277 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWE EGNV A TFGEM+ R W P + AY FL TL+ G QVDEALK+L VMK + C
Sbjct: 224 GWEIEGNVSNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKC 283
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF----NLMPNLIMYNAVVGLLCNNN- 115
P L FF N L IL + LW +M F ++P+L YN ++G+ C+ N
Sbjct: 284 LPDLGFFRNTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVCCSANP 343
Query: 116 -DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
V++ + D+M GAFPDS TYN IFE I +KV E + F EM KNE+ P N
Sbjct: 344 IQVNSAYSLLDEMALTGAFPDSKTYNTIFEAFITARKVEEASSIFREMTKNEFCPLYANY 403
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
AI M +AD+ E A+ +W ++++ I P A +L+ G +LGR+S +++ E +
Sbjct: 404 VMAIKMYFEADDSEMAVMMWRHMIQKAIFPKSDCAAILIDGFLDLGRVSAALKYSLEAIT 463
Query: 235 RRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
R + I TM KLK A + +D + LE + K+
Sbjct: 464 RGVQIPVETMIKLKNASIQTGK--QDAYGQLEIKMKS 498
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G V EA TF E++E++ + V+A ++ L R KQV AL+F +K E P
Sbjct: 158 QAGKVDEARMTF-EVMEQYGCR-QDVVALNCYISALCRYKQVKAALEFFDSVK-ERIAPD 214
Query: 64 LKFFSNALDIL-VKLNDSTHTVQLWDIMVGIGFNLMP-NLIMYNAVVGLLCNNNDVDNVF 121
++ L+ ++ N S +++ +G+ MP N YNA + L N VD
Sbjct: 215 ADTYALLLEGWEIEGNVSNARSTFGEMIARLGW--MPNNTSAYNAFLSTLVNGFQVDEAL 272
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
++ M PD + + L + K + E + M
Sbjct: 273 KYLGVMKTKKCLPDLGFFRNTLQILYQRKAMKEPYGLWQLM 313
>gi|356539840|ref|XP_003538401.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 486
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 162/272 (59%), Gaps = 4/272 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE E ++V A +TF EMV W+P +V AY++FL TL+RG + EA+KF+ M+
Sbjct: 217 GWEGEKSMVSAKETFAEMVIEIGWDPANVPAYDSFLCTLVRGHDGLLEAIKFVDSMRDRR 276
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C+P ++F ALD VK +D W+++V +G L P MYN ++GL C D D
Sbjct: 277 CYPGVRFLKAALDECVKCHDVRTAEFFWEVLV-VGKVLQPTSEMYNLMIGLCCYRGDTDA 335
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +MV+ GAFPD +TYN++F+ L+K +K+ E + F EM++NE P NC A+
Sbjct: 336 ARRMLHEMVYQGAFPDVVTYNLLFKFLLKGRKLREASSVFAEMVQNECVPEQDNCDLAVK 395
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+D EP AI++W ++EN LE +AN L+VGL NL R ++AE+M+ R I +
Sbjct: 396 AYVDCGEPVMAIKVWKCLVENYKKGLEQTANFLVVGLCNLNRPQVAVKYAEDMIGRGISL 455
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
T+ KL+++ E R ++ L R+WK+
Sbjct: 456 SSSTLSKLRQSLVKERREY--VYEDLLRKWKS 485
>gi|116790303|gb|ABK25569.1| unknown [Picea sitchensis]
Length = 541
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 157/273 (57%), Gaps = 7/273 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GWE EGNV A TFGEM+ W P + AY FL TL+ G QV+EALKFL +MK C
Sbjct: 271 GWEIEGNVSMAKTTFGEMIVHLGWVPNNTSAYNAFLSTLVNGFQVEEALKFLVMMKSLKC 330
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN--DVD 118
P L FF N L +L + D+ + LW++M G ++P+L YN ++G+ C+ N VD
Sbjct: 331 LPDLGFFRNTLQLLYQRKDTKNAYGLWELMRQSG--IVPDLPTYNTMIGVCCSVNPIQVD 388
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
R +MV +GAFPD +YN IFE LI +KV E + F EM KNE+ P N AI
Sbjct: 389 FADRLLVEMVCNGAFPDFRSYNTIFEALIIARKVEEASSIFREMTKNEFCPLYANYVRAI 448
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + ++P+ A+ +W ++++ I P A L+ G +LGR+S+ +++ E +NR +
Sbjct: 449 KMYFEVEDPDMAVIMWKHMIQKAIFPKSDCAATLIDGFCDLGRVSEALKYSLETINRGVE 508
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
I TM KLK A +D + LE++ K+
Sbjct: 509 IPVETMTKLKNA---RQAGKQDAYGQLEKKMKS 538
>gi|255583417|ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527826|gb|EEF29924.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 510
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 166/274 (60%), Gaps = 6/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGEN 59
GWEKE N+V + +TF EMV W+P + AY+TFL TL+ G+ +E ++FL +MK +
Sbjct: 241 GWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLMGRIGFNEVIEFLEIMKEKR 300
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVD 118
C P ++FF A++ +K+ND +W++M+ GF P++ MYN ++ L C N+ D
Sbjct: 301 CCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFR--PDIEMYNLMISLYCYTNNTD 358
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
RF D+MV++G FPD TYN++F+ LIK++K+ E F+EMIKNE P NC+ A+
Sbjct: 359 IALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKNECLPNQANCSAAV 418
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + + +P AI++W ++EN L LE + N+L+V L +L + ++AE M+ + I
Sbjct: 419 RVFMHSKDPYMAIKVWKCMIENYELDLEETGNLLIVELCDLHMDPEAVKYAESMIGKGIK 478
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ TM+KLK + ++ L R+WK
Sbjct: 479 VTSPTMEKLKLCLKQARKEF--VYERLLRKWKAG 510
>gi|224065166|ref|XP_002301697.1| predicted protein [Populus trichocarpa]
gi|222843423|gb|EEE80970.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 166/277 (59%), Gaps = 7/277 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG-KQVDEALKFLRVMKGEN 59
GWEKE NV A TF +MV W+P +V AY+TFL TL+ G + EA+K MK
Sbjct: 226 GWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMGYDGLREAMKHFDTMKDRG 285
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVD 118
CFP +KFF AL+ +K ND + +W+ +V +GF P++ +YN ++G+ C +N D
Sbjct: 286 CFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFR--PDIQLYNLMIGIHCYDNQTD 343
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+F D+M+++G FPDS TYN++F+ LIK KK+ E +EMIKNE+ P NC AI
Sbjct: 344 IANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIKNEFFPNKTNCNAAI 403
Query: 179 TMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+D+ EP AI++W ++EN G LE + N+L+V LR + + ++AE M+ + I
Sbjct: 404 KAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVPEAVKYAEVMIEKGI 463
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+ ++ KLK+ E + + ++ L R+WK ++
Sbjct: 464 KLTSSSLSKLKQMLNEEKKPI--LYEELLRKWKAHRV 498
>gi|449445204|ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 160/274 (58%), Gaps = 4/274 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE EGN V A +TFGEM+E W+P + AY +FL L+R + AL + +K +
Sbjct: 248 GWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTFQRLKDKM 307
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C+P KFF ALD +K D LW+ ++ N P+ M+N+++ L C+ ND D
Sbjct: 308 CYPGFKFFKLALDECIKCGDIKSGKYLWNEIIQ-SINFQPDTYMFNSMIALCCHQNDTDE 366
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R D+M+ GAFP++ TYN++F+ L+K +K+ + F EMIKNE+ P+ NC AI
Sbjct: 367 ARRLLDEMICFGAFPNAETYNLLFQFLLKGRKLRDASAIFDEMIKNEFIPSHANCNAAIR 426
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ +++ +P AI++W +L+N LE + N L+V L++ RL + ++A EM++R I +
Sbjct: 427 IYIESQDPNGAIKVWKCMLKNYDSDLEETGNFLIVRLQDQKRLPEAVKYAHEMVDRAIKL 486
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
D T+ KLK + + + +D L + K S+
Sbjct: 487 KDSTLAKLKHSLFEVRK--ESMYDELMVKLKCSE 518
>gi|225453152|ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 502
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 155/272 (56%), Gaps = 4/272 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE EGN A +TF EMV W+P +V AY++FL L+ G EA+KF +M+
Sbjct: 233 GWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREAMKFFEIMRDRQ 292
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P ++F+ L VK +DS LW M+ P+ MYN+++ L C+ +++
Sbjct: 293 CSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNI-CRPDTEMYNSMIALHCSCDNIVM 351
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D+MV +GAFPDS TYN++F LI+ +K+ E + F EM++NE P NC A+
Sbjct: 352 ARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVR 411
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ LD + AI++W YI+EN LE + N+L+ GLR+ R+ + ++A++M+ R I +
Sbjct: 412 IYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKL 471
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
T+ KLK A + +D L R+WKT
Sbjct: 472 TSSTLSKLKHALVEVGKG--PVYDELLRKWKT 501
>gi|296087160|emb|CBI33534.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 155/272 (56%), Gaps = 4/272 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE EGN A +TF EMV W+P +V AY++FL L+ G EA+KF +M+
Sbjct: 237 GWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREAMKFFEIMRDRQ 296
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P ++F+ L VK +DS LW M+ P+ MYN+++ L C+ +++
Sbjct: 297 CSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNI-CRPDTEMYNSMIALHCSCDNIVM 355
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D+MV +GAFPDS TYN++F LI+ +K+ E + F EM++NE P NC A+
Sbjct: 356 ARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVR 415
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ LD + AI++W YI+EN LE + N+L+ GLR+ R+ + ++A++M+ R I +
Sbjct: 416 IYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKL 475
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
T+ KLK A + +D L R+WKT
Sbjct: 476 TSSTLSKLKHALVEVGKG--PVYDELLRKWKT 505
>gi|115448241|ref|NP_001047900.1| Os02g0711100 [Oryza sativa Japonica Group]
gi|41052650|dbj|BAD07498.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|41052866|dbj|BAD07780.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537431|dbj|BAF09814.1| Os02g0711100 [Oryza sativa Japonica Group]
gi|125540864|gb|EAY87259.1| hypothetical protein OsI_08660 [Oryza sativa Indica Group]
gi|215687282|dbj|BAG91847.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 489
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 7/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD---EALKFLRVMKG 57
G E G+ A + F EM ++P +V AY++FL TLI +A+ +L ++
Sbjct: 219 GCEAAGDPHVAREVFDEMRHVIGFDPANVPAYDSFLTTLISSGSSTALMDAMDYLAILHR 278
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ C P KFF AL +K + V LW+ V + L+P+ MY+ ++ L
Sbjct: 279 QRCSPGEKFFRAALAAHLKARELRGAVVLWNDFV-VRRGLIPDKEMYSTMIMLQGTLGHP 337
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D+M F G FPD+ TYNM+F+ L+K +K+ E F EM+KNE+ P NC+ A
Sbjct: 338 EVIVEYLDEMTFDGVFPDADTYNMVFQFLLKGRKLREASAIFSEMVKNEFWPNEANCSLA 397
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD + + I++W ++ENG+ PLE S N+L+ L++ RL + ++AE+M++R I
Sbjct: 398 LRMFLDTRDWDSGIKLWKCMVENGLPPLEESGNMLVSKLKD-ERLPEACKYAEDMIDRCI 456
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
+ TM KLK+ + D L R+WK
Sbjct: 457 KLSSSTMSKLKQCLMKVYKG--HIHDHLLRKWKA 488
>gi|226498918|ref|NP_001144625.1| uncharacterized protein LOC100277643 [Zea mays]
gi|195644788|gb|ACG41862.1| hypothetical protein [Zea mays]
Length = 492
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 149/274 (54%), Gaps = 7/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G E ++ A + F EMV+ + P++V AY++FL TL+ + EA+++L V+
Sbjct: 222 GSEAAADLRVAREVFDEMVQAIGFYPDNVPAYDSFLTTLVSSDSSTALPEAMEYLNVLSR 281
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KFF AL ++ + LWD VG L+P++ MYN ++ L +
Sbjct: 282 HGCSPGEKFFRAALAAHLEARQLRGAMNLWDDFVG-RRGLVPDMEMYNTMIKLQGSLGHA 340
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D M+ +G FPD+ TYN++ + L+K KK E F EM+KNE P NC+ A
Sbjct: 341 ELIVGYLDDMISNGVFPDTNTYNVVLQLLLKGKKHREAAAIFSEMVKNECWPNEGNCSLA 400
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD E I++W ++ENG+ PL+ N+L+ L++ RL + ++AE+M++R I
Sbjct: 401 LRMFLDTHYWETGIKVWCCMVENGLPPLQECGNMLVAKLKD-DRLPEACKYAEDMIDRGI 459
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
+ T+ KLK+ + + D L +WK
Sbjct: 460 KLSSATLSKLKQRLQRIKKG--EIHDHLLAKWKA 491
>gi|413938524|gb|AFW73075.1| hypothetical protein ZEAMMB73_887223 [Zea mays]
Length = 492
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 7/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G E ++ A + F EMV+ + P++V AY++FL TL+ + EA+++L V+
Sbjct: 222 GSEAAADLRVAREVFDEMVQAIGFYPDNVPAYDSFLTTLVSSDSSTALPEAMEYLNVLSR 281
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KFF AL + + LWD VG L+P++ MYN ++ L +
Sbjct: 282 HGCSPGEKFFRAALAAHLDARQLRGAMNLWDDFVG-RRGLVPDMEMYNTMIKLQGSLGHA 340
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D M+ +G FPD+ TYN++ + L+K KK E F EM+KNE P NC+ A
Sbjct: 341 ELIVGYLDDMISNGVFPDTNTYNVVLQLLLKGKKHREAAAIFSEMVKNECWPNEGNCSLA 400
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD E I++W ++ENG+ PL+ N+L+ L++ RL + ++AE+M++R I
Sbjct: 401 LRMFLDTHYWETGIKVWCCMVENGLPPLQECGNMLVAKLKD-DRLPEACKYAEDMIDRGI 459
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
+ T+ KLK+ + + D L +WK
Sbjct: 460 KLSSATLSKLKQRLQRIKKG--EIHDHLLAKWKA 491
>gi|357137261|ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 488
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 140/251 (55%), Gaps = 5/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK---QVDEALKFLRVMKG 57
G E G+ A + F EMV ++P +V AY++FL TL+ + EA+ +L V++
Sbjct: 218 GCEAAGDPAVAREVFDEMVRHVGFDPANVPAYDSFLTTLVSSSSTTALTEAMDYLAVLRR 277
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KF AL +K D LWD V + L+P+ MY++++ L
Sbjct: 278 YRCSPGEKFLRAALAAHLKAQDLRGAQVLWDDFV-VRLGLIPDKEMYSSMIMLQGTLGHA 336
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D M F+G FPD+ TYNM+ + L+K +K+ E F EM+KNE P NC+ A
Sbjct: 337 EVIVEYVDDMAFYGVFPDADTYNMVLKLLLKGRKLREASAIFREMVKNECWPNEANCSLA 396
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD + E I++WN ++ NG+ PLE S N+L+ L++ L + ++AE+M+++ I
Sbjct: 397 LRMFLDTRDWETGIKVWNCMVANGLPPLEESGNMLVSKLKD-EMLPEACKYAEDMIDQGI 455
Query: 238 LIYDVTMQKLK 248
+ T+ KL+
Sbjct: 456 KVSSSTLGKLR 466
>gi|326494526|dbj|BAJ94382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 147/275 (53%), Gaps = 9/275 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G E GN A + F EMV +++P +V AY++FL TL+ + +A+++L V++
Sbjct: 218 GCEAAGNAAVAREVFDEMVHALDFDPANVPAYDSFLTTLVSSGSSTALSDAMEYLAVLRR 277
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KF AL ++ + V LWD V + L+P+ MY ++ L
Sbjct: 278 YRCSPGEKFLRAALAAYLEARELRSAVVLWDEFV-LRRGLVPDKEMYTTMIMLQGTLGHA 336
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++ D+M +G FPD+ TYN++ + L+K +K+ E F EM+KNE P NC+ A
Sbjct: 337 EVTVKYLDEMAIYGVFPDADTYNVVLKLLLKGRKLREASAIFKEMVKNECWPNEANCSLA 396
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD + + I++W + N + PLE N+L+ L++ L + ++AE+M+++ I
Sbjct: 397 LGMFLDTRDWDTGIKVWKCMAANSLPPLEEGGNMLVSKLKD-EMLPEACKYAEDMIDQGI 455
Query: 238 LIYDVTMQKLKKAFYNESR-SMRDRFDSLERRWKT 271
+ T+ KLK + + ++ DR L +WK
Sbjct: 456 KLSSSTLTKLKHSLGKVKKGAIHDR---LFAKWKA 487
>gi|326502308|dbj|BAJ95217.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 147/275 (53%), Gaps = 9/275 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G E GN A + F EMV +++P +V AY++FL TL+ + +A+++L V++
Sbjct: 243 GCEAAGNAAVAREVFDEMVHALDFDPANVPAYDSFLTTLVSSGSSTALSDAMEYLAVLRR 302
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KF AL ++ + V LWD V + L+P+ MY ++ L
Sbjct: 303 YRCSPGEKFLRAALAAYLEARELRSAVVLWDEFV-LRRGLVPDKEMYTTMIMLQGTLGHA 361
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++ D+M +G FPD+ TYN++ + L+K +K+ E F EM+KNE P NC+ A
Sbjct: 362 EVTVKYLDEMAIYGVFPDADTYNVVLKLLLKGRKLREASAIFKEMVKNECWPNEANCSLA 421
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M LD + + I++W + N + PLE N+L+ L++ L + ++AE+M+++ I
Sbjct: 422 LGMFLDTRDWDTGIKVWKCMAANSLPPLEEGGNMLVSKLKDE-MLPEACKYAEDMIDQGI 480
Query: 238 LIYDVTMQKLKKAFYNESR-SMRDRFDSLERRWKT 271
+ T+ KLK + + ++ DR L +WK
Sbjct: 481 KLSSSTLTKLKHSLGKVKKGAIHDR---LFAKWKA 512
>gi|125583433|gb|EAZ24364.1| hypothetical protein OsJ_08117 [Oryza sativa Japonica Group]
Length = 438
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD---EALKFLRVMKG 57
G E G+ A + F EM ++P +V AY++FL TLI +A+ +L ++
Sbjct: 219 GCEAAGDPHVAREVFDEMRHVIGFDPANVPAYDSFLTTLISSGSSTALMDAMDYLAILHR 278
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ C P KFF AL +K + V LW+ V + L+P+ MY+ ++ L
Sbjct: 279 QRCSPGEKFFRAALAAHLKARELRGAVVLWNDFV-VRRGLIPDKEMYSTMIMLQGTLGHP 337
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D+M F G FPD+ TYNM+F+ L+K +K+ E F EM+KNE+ P NC+ A
Sbjct: 338 EVIVEYLDEMTFDGVFPDADTYNMVFQFLLKGRKLREASAIFSEMVKNEFWPNEANCSLA 397
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPL 205
+ M LD + + I++W ++ENG+ P+
Sbjct: 398 LRMFLDTRDWDSGIKLWKCMVENGLPPI 425
>gi|449534079|ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like, partial [Cucumis sativus]
Length = 391
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGEN 59
GWE EGN V A +TFGEM+E W+P + AY +FL L+R + AL + +K +
Sbjct: 248 GWESEGNTVCAKQTFGEMIEEIGWDPTNTPAYNSFLCVLLRDPNGLQRALVTFQRLKDKM 307
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C+P KFF ALD +K D LW+ ++ N P+ M+N+++ L C+ ND D
Sbjct: 308 CYPGFKFFKLALDECIKCGDIKSGKYLWNEIIQ-SINFQPDTYMFNSMIALCCHQNDTDE 366
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFE 144
R D+M+ GAFP++ TYN++F+
Sbjct: 367 ARRLLDEMICFGAFPNAETYNLLFQ 391
>gi|242064592|ref|XP_002453585.1| hypothetical protein SORBIDRAFT_04g008520 [Sorghum bicolor]
gi|241933416|gb|EES06561.1| hypothetical protein SORBIDRAFT_04g008520 [Sorghum bicolor]
Length = 436
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 26/274 (9%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKGEN 59
E + A EMV P+++ AYE FL L+ + EA+ +L + +
Sbjct: 183 EAAADTRGARDVCDEMVHDIGVGPDNMPAYEAFLAMLVSSNSSMALLEAMYYLDFLNKRS 242
Query: 60 CFPTL--KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P +FF + + ++ + LWD VG L+P++ MYN ++ L + V
Sbjct: 243 CSPGAGERFFCAVVAVHLEAGELRGATYLWDKFVG-RRGLVPDMEMYNTMIMLQGSLGHV 301
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + + D M+F+G PD+ TYN+ L++ +++H+ F EM+KNE P NC+ A
Sbjct: 302 EVIVDYLDDMIFNGLVPDTNTYNVFLLILLERRELHKAATIFSEMVKNECWPNEGNCSLA 361
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + LDA E I IW+ ++ENG+ PLE N+L+ L++ + + L++
Sbjct: 362 LRLFLDARYWETGIRIWSCVVENGLPPLEECGNMLVSKLKD-------DKLSSSTLSKLK 414
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
L MQK+KK RD +D L R+W+
Sbjct: 415 L----CMQKIKK---------RDIYDDLLRKWEA 435
>gi|413951473|gb|AFW84122.1| hypothetical protein ZEAMMB73_475584 [Zea mays]
Length = 354
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 87/200 (43%), Gaps = 50/200 (25%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
WEKEGN V A FGEMV R W+ +
Sbjct: 198 AWEKEGNAVRAKSVFGEMVVRIGWDAAN-------------------------------- 225
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
D + V +W +MV L+PN MY+A++GL CN +D+
Sbjct: 226 -----------------GDYLNAVAIWHMMVSEA-GLVPNFSMYSAMIGLHCNAGSIDDA 267
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M +GAF +S+TY+ I E I N+K E E+F EM KNE PT NC AI++
Sbjct: 268 LGLLDEMPLNGAFANSVTYHTILEGFINNRKAREAESFLTEMSKNEQLPTASNCDVAISL 327
Query: 181 LLDADEPEFAIEIWNYILEN 200
P AI++W I E+
Sbjct: 328 FFKEFNPSAAIDVWRCIEEH 347
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G+ EA K F EM ER V+AY + L L +G VDEA K R M
Sbjct: 201 GWGDVGDSSEARKLFEEMRER--GCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGL 258
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + ++ND Q+ D M +NL+PN+ YN +V LC + VD
Sbjct: 259 APDACSYSIFIRAYCEVNDIHSAFQVLDRMRR--YNLVPNVFTYNCIVKKLCKSEKVDEA 316
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ D+M+ G PD +YN I + +V++ M K P + M
Sbjct: 317 YQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKM 376
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
LL + ++W + E G P ++ V++ G + G+L + ++ E M++ I
Sbjct: 377 LLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPP 436
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 437 YSCTVELLR 445
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 67/165 (40%)
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+L L H Q + + +MPN Y+ ++ + D + F++M G
Sbjct: 164 LLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGC 223
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
D + YN + E L K V E F EM N P + + I + ++ A +
Sbjct: 224 AVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ 283
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + + ++P + N ++ L ++ + + +EM+ R +
Sbjct: 284 VLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGV 328
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G+ EA K F EM ER V+AY + L L +G VDEA K R M
Sbjct: 228 GWGDVGDSSEARKLFEEMRER--GCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGL 285
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + ++ND Q+ D M +NL+PN+ YN +V LC + VD
Sbjct: 286 APDACSYSIFIRAYCEVNDIHSAFQVLDRMRR--YNLVPNVFTYNCIVKKLCKSEKVDEA 343
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ D+M+ G PD +YN I + +V++ M K P + M
Sbjct: 344 YQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKM 403
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
LL + ++W + E G P ++ V++ G + G+L + ++ E M++ I
Sbjct: 404 LLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPP 463
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 464 YSCTVELLR 472
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 67/165 (40%)
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+L L H Q + + +MPN Y+ ++ + D + F++M G
Sbjct: 191 LLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGC 250
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
D + YN + E L K V E F EM N P + + I + ++ A +
Sbjct: 251 AVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ 310
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + + ++P + N ++ L ++ + + +EM+ R +
Sbjct: 311 VLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGV 355
>gi|383176220|gb|AFG71632.1| hypothetical protein 2_10152_01, partial [Pinus taeda]
Length = 144
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 80/134 (59%)
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
VD V R D+MV++G FPD TYN IFE LI +KV E F EM KNE+ P N
Sbjct: 11 VDFVDRLLDEMVYNGIFPDFKTYNTIFEGLITARKVEEASIIFREMTKNEFCPLYDNYVM 70
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
AI M L+AD+PE A+ +W ++++ I P A +L+ +LGR+S+ +++ + + R
Sbjct: 71 AIKMYLEADDPEMAVTMWKHMIQKAIFPKSDCAAILVDWFCDLGRVSEAVKYSMDAIARG 130
Query: 237 ILIYDVTMQKLKKA 250
+ + T KLKKA
Sbjct: 131 VQLPVETTTKLKKA 144
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G VEA K F EM R VLAY + L L +G VDEA K R +
Sbjct: 226 GWGDIGEAVEARKVFDEM--RGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGV 283
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + N+ + D M ++L+PN+ YN ++ LC N V++
Sbjct: 284 EPDACSYAIFIRAYCEANNIHSVFSVLDRMKR--YDLVPNVFTYNCIIKKLCKNGKVEDA 341
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ +M+ G PD+ +YN I ++ +V+ M+K+ P + + +
Sbjct: 342 YQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKL 401
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + A EIW + E G P ++ +V++ GL + G+L + R+ E M++ I
Sbjct: 402 LVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPP 461
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 462 YASTIEMLR 470
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY + + + + DEA+K R M+ C
Sbjct: 293 GWGHEKDLLMLKSVYQEMLDA-GLQPD-VVAYGMLISSFCKSGKCDEAIKVFREMETNGC 350
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L ++ +++ GF + + NAVVG C ++ +
Sbjct: 351 MPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPM--EVPTCNAVVGAYCRSSKFQHA 408
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M G P+S TY++I LIK++K+ E N F M K+ +P + M
Sbjct: 409 FKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGM 468
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+++WN + E G+LP + L+ GL RL + + +EML+R I
Sbjct: 469 FCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPP 528
Query: 241 DVTMQKLKKAFYNESR 256
LK+A R
Sbjct: 529 GQLFSNLKEALIEGGR 544
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+L+ +TF + + R ++V EA++ M G L ++ +D+L K
Sbjct: 210 LLSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHA 269
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ M G +P+L Y ++ + D+ + + +M+ G PD + Y M+
Sbjct: 270 IFKEMKRNG-RFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISS 328
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTP 171
K+ K E F EM N P+P
Sbjct: 329 FCKSGKCDEAIKVFREMETNGCMPSP 354
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KE N++ ++ + EM +++ V+ Y + + K+ D A++ M+ +NC
Sbjct: 270 GWGKEHNLLRLDEVYLEM--KYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNC 327
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + ++ L + ++ ++ GF P YN++VG C + +D+
Sbjct: 328 KPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFT--PEAPTYNSLVGAYCWSMRIDDA 385
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE--WQPTPLNCATAI 178
F+ D+M H A P+S TY++I LIK ++ +E F +M NE +PT +
Sbjct: 386 FQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKM-SNEPGCEPTVSTYEIIV 444
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + D + A ++W+ + G+LP + L+ L + +L + ++ +EML+ I
Sbjct: 445 RMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIR 504
Query: 239 IYDVTMQKLKKAFYNESR 256
LK+A +E +
Sbjct: 505 PPAKMFSNLKQALLDEGK 522
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 32 YETFLITLIRGKQVDEA-LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y+ L LI+ ++ +EA +F ++ C PT+ + + + + Q+WD M
Sbjct: 404 YDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQM 463
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++P + MY+ ++ LC+ N + ++F +M+ G P + ++ + + L+
Sbjct: 464 KAKG--VLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEG 521
Query: 151 KVHEVENFFHEMIKNEWQPTPL 172
K E N ++ N+ + TPL
Sbjct: 522 KNDEALNLARKI--NKLRGTPL 541
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 8/197 (4%)
Query: 7 NVVEANKTFGEMVERFE------WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
N + + K E +E FE + PE Y + + ++D+A + + M+ +
Sbjct: 339 NGLGSEKRLSEALEFFERFKSCGFTPE-APTYNSLVGAYCWSMRIDDAFQVIDEMRKHSA 397
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L L+K + + M P + Y +V + CN + VD
Sbjct: 398 GPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEP-GCEPTVSTYEIIVRMFCNEDRVDLA 456
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +DQM G P Y+ + L K+ E +F EM+ +P +
Sbjct: 457 KQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQA 516
Query: 181 LLDADEPEFAIEIWNYI 197
LLD + + A+ + I
Sbjct: 517 LLDEGKNDEALNLARKI 533
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++ ++ M GF L + +N ++ LC + V+ + FD+M PD +Y ++
Sbjct: 210 AIEAFERMEEFGFKLETS--DFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTIL 267
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
E K + ++ + EM + ++P + I+ A + + AIE+++ +
Sbjct: 268 LEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNC 327
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAE 230
P L+ GL + RLS+ F E
Sbjct: 328 KPTPHVYCTLINGLGSEKRLSEALEFFE 355
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 7/258 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW +E N+++ ++ + EM E FE + V+ Y + + ++ D+A++ R M+ +N
Sbjct: 260 GWGQEKNLLKLDEVYREMKDEGFEPD---VVTYGILINAYCKVRKYDDAIELFREMESKN 316
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P+ F ++ L + + ++ + GF P YNAVVG C + +D+
Sbjct: 317 CQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGF--APETPTYNAVVGAYCWSMRIDD 374
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM-IKNEWQPTPLNCATAI 178
+R D+M G P+S TY++I LIK +K E + F +M + E +PT +
Sbjct: 375 AYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIV 434
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + D+ E AI++W+ + G+ P ++L+ L + +L ++ +EML+ I
Sbjct: 435 RMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIR 494
Query: 239 IYDVTMQKLKKAFYNESR 256
LK+A + R
Sbjct: 495 PPAALFSHLKQALIEDGR 512
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 93/253 (36%), Gaps = 43/253 (16%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G V EA TF +M E+F E + L TLI+ +QV A MK
Sbjct: 191 YARSGKVKEAMNTFEKM-EKFGLKIEST-DFNRLLDTLIKSRQVLSAQNVFDKMKIRRFV 248
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P +K ++ L+ G+ NL+ +D V+
Sbjct: 249 PDIKSYTILLE---------------------GWGQEKNLL-------------KLDEVY 274
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R +M G PD +TY ++ K +K + F EM QP+P T I L
Sbjct: 275 R---EMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGL 331
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI---- 237
A+E + +G P + N ++ R+ D R +EM +
Sbjct: 332 GSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNS 391
Query: 238 LIYDVTMQKLKKA 250
YD+ + L KA
Sbjct: 392 RTYDIILHHLIKA 404
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+ + K + +M++ P+ ++ Y + +L + +V+EA+ ++ M C
Sbjct: 214 GWGRAPNLPKMRKVYSDMLDA-GCQPD-IVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGC 271
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + + +++ D+ T D+ ++P++++YNA+V C
Sbjct: 272 QPTTFIYSVLVHTYGVEMRIEDAVAT--FLDMQKD---GIVPDVVVYNALVTAFCKVKKF 326
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
DN FR D M HG P+S T+N+I LI K E F MIK QP
Sbjct: 327 DNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMM 385
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D E A+++W Y+ LP + +VL+ GL + G +S E+M+ + I
Sbjct: 386 IKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 445
Query: 238 LIYDVTMQKLKKAFYNESR 256
T KL++ E R
Sbjct: 446 RPPGSTFGKLRQLLLKEGR 464
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Query: 27 EHVLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ V+ ETF I + R ++VDEA+ VM+ P L F++ L L K +
Sbjct: 131 QGVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKA 190
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++++ M G P+ Y+ ++ ++ + + + M+ G PD +TY ++
Sbjct: 191 QEIFEQMNG---RFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMV 247
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K +V E +M QPT + + E A+ + + ++GI+
Sbjct: 248 DSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIV 307
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P N L+ + + + R ++M
Sbjct: 308 PDVVVYNALVTAFCKVKKFDNAFRVMDDM 336
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA K + +M++ ++ P+ ++A+ T L L+R K+ +A+K VMK +
Sbjct: 321 GWCRVRNLMEAGKIWNQMIDE-DFKPD-IVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGP 378
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +K ++ + K VQ ++ M G G P+ +Y ++ N +D V
Sbjct: 379 SPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG--CRPDAAIYTCLITGFGNQKRMDTV 436
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M +G PD TYN + + + + + + +MI+N +PT + +
Sbjct: 437 YGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKS 496
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E + W+ + G P + S V + GL +LGR ++ ++ EEM+ + +
Sbjct: 497 YFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAP 556
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F R D + L ++ K S
Sbjct: 557 QLDYNKFAADFSRAGRP--DILEELAQKMKFS 586
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 89/230 (38%), Gaps = 7/230 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPE-HVLAYETFLI---TLIRGKQVDEALKFLRVMKGENCFP 62
++ + F MV E E +L ETF + K+ +A+ L +MK
Sbjct: 217 TILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKV 276
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ + LD L + + +++ + G PNL Y ++ C ++ +
Sbjct: 277 GVETINCLLDSLGRAKLGKEALTIFEKLHG---RFTPNLQTYTVLLNGWCRVRNLMEAGK 333
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++QM+ PD + +N + E L++ KK + F M P + +
Sbjct: 334 IWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFC 393
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A++ + + G P A L+ G N R+ V +EM
Sbjct: 394 KQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 443
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K+ N+ +A + F EMV P+ ++ Y + L + +VDEAL + M C
Sbjct: 168 GWGKDPNLPKAREIFREMVSN-GCRPD-IVTYGIMVDVLCKAGRVDEALGIVNEMDSTVC 225
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +S + N V + M G P++ +YNA++G C N + NV
Sbjct: 226 KPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIE--PDVAVYNALIGAFCKANRLKNV 283
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R ++M G P+S T+N+I LI + E F MIK +P I M
Sbjct: 284 YRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKM 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ DE + A+++W Y+ +P + VL+ GL G ++ EEM+ + I
Sbjct: 343 FCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPS 402
Query: 241 DVTMQKLKKAFYNESR 256
VT +L++ E R
Sbjct: 403 GVTFGRLRQLLIKEGR 418
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 33 ETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
ETF I + R ++V+EA+ +M + P L F+ L L K + +++D
Sbjct: 91 ETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFD- 149
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
I +P+ Y+ ++ + ++ F +MV +G PD +TY ++ + L K
Sbjct: 150 --SIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKA 207
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+V E +EM +PTP + + + E A+ + + NGI P A
Sbjct: 208 GRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVY 267
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
N L+ RL +V R EM
Sbjct: 268 NALIGAFCKANRLKNVYRVLNEM 290
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K N+ + + + EM++ P+ ++ Y + +L + +V+EA+ ++ M C
Sbjct: 215 GWGKAPNLPKMREVYSEMLDA-GCQPD-IVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGC 272
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + + +++ D+ T D+ ++P++++YNA+V C
Sbjct: 273 QPTTFIYSVLVHTYGVEMRIEDAVAT--FLDMEKD---GIVPDVVVYNALVTAFCKVKKF 327
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+N FR D M HG P+S T+N+I LI K E F MIK QP
Sbjct: 328 ENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIK-RCQPDSDTYTMM 386
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D E A+++W Y+ LP + +VL+ GL + G +S E+M+ + I
Sbjct: 387 IKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 446
Query: 238 LIYDVTMQKLKKAFYNESR 256
T KL++ E R
Sbjct: 447 RPPGSTFGKLRQLLLKEGR 465
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 22 FEWNPEH--------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
FEW + + +Y T + +L + +Q + +M+ E ++ F +
Sbjct: 88 FEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGVV-NVETFGIIMRK 146
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V ++IM G ++PNL +N+++G LC + +V FD+M +G F
Sbjct: 147 YARAQKFDEAVYTFNIMEKYG--VVPNLAAFNSLLGALCKSKNVRKAQEIFDKM--NGRF 202
Query: 134 -PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD+ TY+++ E K + ++ + EM+ QP + + L E A+
Sbjct: 203 NPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVL 262
Query: 193 IWNYILENGILPLEASANVLL 213
+ + G P +VL+
Sbjct: 263 VVQDMSSRGCQPTTFIYSVLV 283
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 15/260 (5%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW +E N++ N+ +GEM E FE P+ V+AY + + K+ DEA++F M+ N
Sbjct: 243 GWGQELNLLRVNEVYGEMKDEGFE--PD-VVAYGIIINAYCKAKKYDEAVRFFNEMEQRN 299
Query: 60 CFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
C P+ F N L KLND+ ++ ++ GF L YNA+VG C +
Sbjct: 300 CKPSPHIFCSLINGLGSEKKLNDA---LEFFERSKSSGFPL--EAPTYNALVGAYCWSQR 354
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+++ F+ D+M G P++ TY++I LI+ ++ E + +M +PT
Sbjct: 355 MEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKM---SCEPTVSTYEI 411
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ M + + + AI+IW+ + G+LP + L+ L + +L + + EML+
Sbjct: 412 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 471
Query: 237 ILIYDVTMQKLKKAFYNESR 256
I +LK+ +E R
Sbjct: 472 IRPPGHLFSRLKQTLLDEGR 491
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY T + + + + DEA+K R M+ C
Sbjct: 275 GWGHEKDLLMLKSVYQEMLDA-GIKPD-VVAYGTLISSFCKSGKCDEAIKVFREMEANGC 332
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L ++ +++ GF + + NAVVG C ++ +
Sbjct: 333 MPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPM--EVPTCNAVVGAYCRSSKFQHA 390
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M G P++ TY++I + LIK++K+ E N F M +P + M
Sbjct: 391 FKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGM 450
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+++W + E G+LP + L+ GL RL + + +EML++ I
Sbjct: 451 FCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPP 510
Query: 241 DVTMQKLKKAFYNESR 256
LK+A R
Sbjct: 511 GQLFSNLKEALIEGGR 526
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVH 153
F L +L YN ++ +L + V F +M +G F PD TY ++ E K +
Sbjct: 224 FGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLL 283
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+++ + EM+ +P + T I+ + + + AI+++ + NG +P +L+
Sbjct: 284 MLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLI 343
Query: 214 VGLRNLGRLSDVRRFAE 230
GL + RL + ++ E
Sbjct: 344 NGLGSEERLDEALKYFE 360
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G V A K F EM E + VLAY + L +G +V EA K R M
Sbjct: 222 GWGDIGESVSACKVFDEMRE--QQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGI 279
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P FS + + ND ++ D M ++L+PN+ YN ++ LC V+
Sbjct: 280 KPDACTFSIFIRAYCEANDIHLAYRVLDEMKR--YDLVPNVFTYNCMIKKLCKKEKVEEA 337
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ ++++ PD+ +YN I ++ +V+ M+K+ P + + +
Sbjct: 338 YQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKL 397
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + AIE+W + E G P ++ +V++ GL + G+L + ++ E M++ I
Sbjct: 398 LIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPP 457
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 458 YSSTVEILR 466
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+ + + + +M+ P+ ++ Y + L + +V+EA+ ++ M C
Sbjct: 216 GWGRAPNLPKMREVYSDMLAA-GCQPD-IVTYGIMVDALCKTGRVEEAVCVVQDMSSRGC 273
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + + +++ D+ T D+ ++P++++YNA+V C
Sbjct: 274 QPTTFIYSVLVHTYGVDMRIEDAVAT--FLDMEKD---GIVPDVVVYNALVTAFCKVKKF 328
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
DN FR D M HG P+S T+N+I LI K E F MIK +P
Sbjct: 329 DNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK-RCKPDSDTYTMM 387
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D+ E A+++W Y+ LP + +VL+ GL + G +S E+M+ + I
Sbjct: 388 IKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 447
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
T KL++ E R +D D L + K
Sbjct: 448 RPPGSTFGKLRQLLLKEGR--KDVLDFLVEKMK 478
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 22 FEWNPEH--------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
FEW V +Y T + +L + +Q + VM+ E ++ FS +
Sbjct: 89 FEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEG-VANVETFSIIMRK 147
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V ++IM G + NL +N+++G LC + +V FD+M + F
Sbjct: 148 YARAQKFDEAVYTFNIMERYG--VAHNLAAFNSLLGALCKSKNVRKAQEIFDKM--NNRF 203
Query: 134 -PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD+ TY+++ E + + ++ + +M+ QP + + L E A+
Sbjct: 204 SPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVC 263
Query: 193 IWNYILENGILPLEASANVLL 213
+ + G P +VL+
Sbjct: 264 VVQDMSSRGCQPTTFIYSVLV 284
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F +M E P+ V+ + + L +G ++ EA + L M+ NC
Sbjct: 310 GLCKAGRLDEACKLFEKMREN-SCEPD-VVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K +++ M+ G PN++ YN+++ C N VD+
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE--PNVVTYNSLIHGFCMTNGVDSA 425
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD +TYN + + L K + E F +M P + + I
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A +++ +L+ +LP + + L+ G N G + D R EEM+
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y T + L + + EA + MK + C P + +S + KL L+D
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ ++P+++ ++ +V CN VD+ R ++MV PD TY + + K
Sbjct: 501 DMLKQA--VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E M K QP + I A +P A + ++ NG+ P +
Sbjct: 559 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVIT 618
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G L + R+ E +
Sbjct: 619 YRSLIGGFCGTGDLEEARKILERL 642
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 12/239 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERF----EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G K + EA F +M ++ EW Y + + +V A L+ MK
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNEWT------YNVLINGFCKVHKVHRAYLLLKEMK 188
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P + +S + + +L+ MV G MPNL+ YN ++ LC N
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGL 246
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D + D+M G PD +Y+ + L K K+ F + + P + +T
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L A + A +++ + EN P + L+ GL RL + ++ E M +R
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V+ + + L + ++ EA + MK + P ++ ++ K++ L
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
M G L PN++ Y+ V+ C VD ++ F QMV +G P+ +TYN + L
Sbjct: 184 LKEMKESG--LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+N + E EM + QP + T + L + + A++++ NG P +
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN-SNGDCPPD 300
Query: 207 ASA-NVLLVGLRNLGRLSDVRRFAEEM 232
A + L+ GL GRL + + E+M
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKM 327
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 12/233 (5%)
Query: 24 WNP---EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
W P +V Y + L + +D+A + L M+ P ++ + L K ++
Sbjct: 51 WPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNT 110
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ + M N+I + ++ LC N + +F +M G P+ TYN
Sbjct: 111 AKALDYFRSM-----ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYN 165
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
++ K KVH EM ++ P + +T I + + A +++ ++EN
Sbjct: 166 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 225
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
G +P + N LL GL G + + +EM R + YD M L K
Sbjct: 226 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + R +VD A K R M C P L ++ L L + +L
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 254
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G L P+ Y+ ++ LC +D + F+ PD + Y+ + L
Sbjct: 255 DEMRERG--LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K ++ E F +M +N +P + + L D + A ++ + + P
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ + L+ GL G++ D + + M+ R I VT L F
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++ V A K F +MVE +++ Y T L L R +DEA + L M+
Sbjct: 205 GFCRQTKVDTAYKLFRQMVE--NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L K +++++ + P+++ Y+ ++ LC +D
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F++M + PD +T+ + + L K ++ E + M P + ++ I
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 380
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A E++ ++ GI P + N L+ G + EEM L
Sbjct: 381 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 440
Query: 241 DVTMQKLKKAFYNESRS 257
+T L R+
Sbjct: 441 IITYNTLIDGLCKTGRA 457
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 58/310 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFL------------------------ 36
G K G EAN+ FG+M +F NP+ V+ Y +
Sbjct: 450 GLCKTGRAPEANRLFGDMKAKF-CNPD-VITYSCLIGGFCKLERIDMARTLFDDMLKQAV 507
Query: 37 -------ITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
TL+ G VD+A + L M +C P + +++ +D K+ +
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M G PN++ Y A++ C +R ++MV +G P+ +TY +
Sbjct: 568 VLKRMAKRG--CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDA----DEPEFAIEIWNYIL 198
+ E + ++E NC A +++D A+E+ I
Sbjct: 626 FCGTGDLEEARKILERLERDE------NCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 679
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-LNRR----ILIYDVTMQKL-KKAFY 252
++G P L+ GL L EEM L+R+ Y+ +Q+L ++ +
Sbjct: 680 QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRH 739
Query: 253 NESRSMRDRF 262
E+ ++ D
Sbjct: 740 EEANALADEL 749
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 115 NDVDNVFRFFDQMVFHGAFPDSL-TYNMIFECLIKNKKVHEVENFFHEMIKNEWQP--TP 171
+D D RFF F ++ TYN +FE L++ +++ E ++KN W P TP
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDET----CHILKNGWPPGITP 57
Query: 172 --LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL---RNLGRLSDVR 226
A I L + + + A E+ + E+G +P A N ++ L RN + D
Sbjct: 58 NVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF 117
Query: 227 RFAEEMLNRRILIYDVTMQKLKKA 250
R E + ++ + + + L KA
Sbjct: 118 RSME--CEKNVITWTIMIDGLCKA 139
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F +M E P+ V+ + + L +G ++ EA + L M+ NC
Sbjct: 191 GLCKTGRLDEACKLFEKMREN-SCEPD-VVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K +++ M+ G PN++ YN+++ C N VD+
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE--PNVVTYNSLIHGFCMTNGVDSA 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD +TYN + + L K + E F +M P + + I
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A +++ +L+ +LP + + L+ G N G + D R EEM+
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y T + L + + EA + MK + C P + +S + KL L+D
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ ++P+++ ++ +V CN VD+ R ++MV PD TY + + K
Sbjct: 382 DMLKQA--VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 439
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E M K QP + I A +P A ++ ++ NG+ P +
Sbjct: 440 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVIT 499
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G L + R+ E +
Sbjct: 500 YRSLIGGFCGTGDLEEARKMLERL 523
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V+ + + L + ++ EA + MK + P ++ ++ K++ L
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
M G L PN++ Y+ V+ C VD ++ F QMV +G P+ +TYN + L
Sbjct: 65 LKEMKESG--LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+N + E EM + QP + T + L + + A++++ NG P +
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN-SNGDCPPD 181
Query: 207 ASA-NVLLVGLRNLGRLSDVRRFAEEM 232
A + L+ GL GRL + + E+M
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKM 208
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 12/239 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERF----EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G K + EA F +M ++ EW Y + + +V A L+ MK
Sbjct: 16 GLCKANRLPEATTYFAKMKKKGTVPNEWT------YNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P + +S + + +L+ MV G MPNL+ YN ++ LC N
Sbjct: 70 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGL 127
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D + D+M G PD +Y+ + L K K+ F + + P + +T
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L + A +++ + EN P + L+ GL RL + ++ E M +R
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + R +VD A K R M C P L ++ L L + +L
Sbjct: 76 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 135
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G L P+ Y+ ++ LC +D + F+ PD + Y+ + L
Sbjct: 136 DEMRERG--LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 193
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K ++ E F +M +N +P + + L D + A ++ + + P
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ + L+ GL G++ D + + M+ R I VT L F
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++ V A K F +MVE +++ Y T L L R +DEA + L M+
Sbjct: 86 GFCRQTKVDTAYKLFRQMVE--NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 143
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L K +++++ + P+++ Y+ ++ LC +D
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKTGRLDEA 201
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F++M + PD +T+ + + L K ++ E + M P + ++ I
Sbjct: 202 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 261
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A E++ ++ GI P + N L+ G + EEM L
Sbjct: 262 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321
Query: 241 DVTMQKLKKAFYNESRS 257
+T L R+
Sbjct: 322 IITYNTLIDGLCKTGRA 338
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N+I + ++ LC N + +F +M G P+ TYN++ K KVH
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM ++ P + +T I + + A +++ ++ENG +P + N LL GL
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 220 GRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
G + + +EM R + YD M L K
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 117/310 (37%), Gaps = 58/310 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFL------------------------ 36
G K G EAN+ FG+M +F NP+ V+ Y +
Sbjct: 331 GLCKTGRAPEANRLFGDMKAKF-CNPD-VITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388
Query: 37 -------ITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
TL+ G VD+A + L M +C P + +++ +D K+ +
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M G PN++ Y A++ C ++ ++MV +G P+ +TY +
Sbjct: 449 VLKRMAKRGCQ--PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDA----DEPEFAIEIWNYIL 198
+ E + ++E NC A +++D A+E+ I
Sbjct: 507 FCGTGDLEEARKMLERLERDE------NCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 560
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-LNRR----ILIYDVTMQKL-KKAFY 252
++G P L+ GL L EEM L+R+ Y+ +Q+L ++ +
Sbjct: 561 QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRH 620
Query: 253 NESRSMRDRF 262
E+ ++ D
Sbjct: 621 EEANALADEL 630
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + +M+++ P+ ++A+ L L+R ++ +A+K VMK +
Sbjct: 316 GWCRVRNLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 373
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K + ++ +D MV G L P+ +Y ++ +D V
Sbjct: 374 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTV 431
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + K +++MI+NE +P+ +
Sbjct: 432 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 491
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E +W+ +++ GI P + S VL+ GL G+ + R+ EEML++ +
Sbjct: 492 YFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 551
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F+ + + F+ L +R K S
Sbjct: 552 LIDYNKFAADFHKGGQP--EIFEELAQRAKFS 581
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 17/238 (7%)
Query: 1 GWEKEGNVVEANKTFGEMV---ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
G+ + G + +A + M + F +NP +RG+ V +AL M
Sbjct: 139 GYCRAGRIEDARRLISGMPFPPDTFTFNP-------LIRALCVRGR-VPDALAVFDDMLH 190
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P++ +S LD K + + L D M G P+++ YN ++ +CN DV
Sbjct: 191 RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCE--PDIVTYNVLINAMCNEGDV 248
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + HG PD++TY + + L +++ EVE F EM N+ P + T
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+T L + AI++ +++ E+G +P + + +L GL ++GR+ D A E+L+R
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDD----AVELLSR 362
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 5/234 (2%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
++ + P+ +AY T L L +Q + A + + M +C P F+ + L +
Sbjct: 363 LKSYGCKPD-TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+++ + M G N P+++ YN+++ LCN +D+ + +G PD +T
Sbjct: 422 LVDRAIKVVEQMSENGCN--PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
+N + + L + + E M+ ++ P T IT L AIE +
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--ILIYDVTMQKLKKA 250
ENG +P +++ N+++ L G+ + + M N ++ Y+ + + KA
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKA 593
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 4/225 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
E + F EM + P+ V + T + +L + VD A+K + M C P + +S+
Sbjct: 285 EVEELFAEMASN-KCAPDEV-TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
LD L + V+L + G P+ I Y V+ LC+ ++ +MV
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCK--PDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PD +T+N + L + V +M +N P + + I L + +
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A+E+ + + G P + N LL GL ++ R D + M++
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH 505
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 8/232 (3%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
R + ++ Y + + VDEAL L + C P ++ +L L S
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT---PVLKSLCGS 280
Query: 81 THTVQLWDIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ ++ + N P+ + +N +V LC VD + D M HG PD +TY
Sbjct: 281 ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
+ I + L +V + + +P + T + L ++ E A E+ ++
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
+ P E + N ++ L G + + E+M N I+ Y+ + L
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG+V EA ++ P+ V Y L +L ++ E + M C P
Sbjct: 245 EGDVDEALNILSDL-PSHGCKPDAV-TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + L + +++ D M G +P+++ Y++++ LC+ VD+
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHG--CIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++ +G PD++ Y + + L ++ E EM+ ++ P + T I L
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ AI++ + ENG P + N ++ GL N
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP- 62
K G EA K M P+ ++ Y T + + + +++EAL LRVM P
Sbjct: 559 KAGKTQEALKLLSGMTN---GTPD-LITYNTVISNITKAGKMEEALDLLRVMVSNGLSPD 614
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ + S A I + + + +++ + +G L P+ YN ++ C N D
Sbjct: 615 TITYRSLAYGI-CREDGTDRAIRMLCRLQDMG--LSPDATFYNDILLGFCQNWRTDIAID 671
Query: 123 FFDQMVFHGAFPDSLTY-----NMIFECLIKNKK 151
F MV G PD TY + +ECL+ K
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ + EALK L M N P L ++ + + K + L +MV
Sbjct: 550 YNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMV 607
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G L P+ I Y ++ +C + D R ++ G PD+ YN I +N +
Sbjct: 608 SNG--LSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWR 665
Query: 152 VHEVENFFHEMIKNEWQP 169
+ F M+ + P
Sbjct: 666 TDIAIDCFAHMVSSGCMP 683
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 1/203 (0%)
Query: 53 RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLL 111
RV E F TL + + +N ++ D I G P+ +N ++ L
Sbjct: 113 RVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRAL 172
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
C V + FD M+ G P +TY+++ + K + EM +P
Sbjct: 173 CVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDI 232
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ I + + + + A+ I + + +G P + +L L R +V E
Sbjct: 233 VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292
Query: 232 MLNRRILIYDVTMQKLKKAFYNE 254
M + + +VT + + +
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQ 315
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 5/197 (2%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
++ + P+ ++ + T L L + ++A + + M +C P F+ + L +
Sbjct: 468 LQSYGCKPD-IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
++ IM G +PN YN VV L + M PD +T
Sbjct: 527 LLLQAIETLKIMAENG--CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLIT 582
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
YN + + K K+ E + M+ N P + + + D + AI + +
Sbjct: 583 YNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642
Query: 199 ENGILPLEASANVLLVG 215
+ G+ P N +L+G
Sbjct: 643 DMGLSPDATFYNDILLG 659
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +++A K F EMV + + P+ V+ Y T + L + A++ L+ M+ + C
Sbjct: 56 GLSSKAKIIDAVKLFDEMV-KMGYEPD-VITYSTIINGLCKMGSTTMAIQLLKKMEEKGC 113
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K T ++ MV G + PN++ Y++++ CN +
Sbjct: 114 KPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGIS--PNVVTYSSILHGFCNLGRSNEA 171
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QMV PD++T+N++ + L K + E + F MI+ +P +
Sbjct: 172 TSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDG 231
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A +++N ++ G P S N+L+ G GR+ + + EM ++ +
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291
Query: 241 DVTMQKLKKAFYNESR 256
VT L K F + R
Sbjct: 292 TVTYSTLMKGFCQDGR 307
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 45/286 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G KEG ++EA F M+E+ E N V Y + Q+DEA K +M +
Sbjct: 196 GLSKEGMILEAQCVFETMIEKGVEPN---VNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 60 CFPTLKFFSNALDILVK--------------LNDSTH------TVQLWDIMVGI------ 93
C P+++ + +IL+K L + +H TV +M G
Sbjct: 253 CAPSVRSY----NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 94 -----------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L+P+L+ Y+ V+ LC +D F M P+ Y ++
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ + K+ F + QP + I+ LL A E++ + +G
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
LP + NV++ G G S+ R EEM+ R T Q L
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 39/284 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ A + +M E+ +V+ Y T + +L + K + EA++FL M
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEK--GCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGI 148
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMV-------GIGFNLM--------------- 98
P + +S+ L L S L+ MV + FN++
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQC 208
Query: 99 -----------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
PN+ YNA++ C+ + +D + F+ MV G P +YN++ +
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ ++ E + EM P + +T + P+ A ++ + G+LP
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328
Query: 208 SANVLLVGLRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKL 247
+ +++L GL G L + ++ E + I IY + +Q +
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P FS L+ L V+L+D MV +G+ P++I Y+ ++ LC
Sbjct: 45 PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYE--PDVITYSTIINGLCKMGSTTMAI 102
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M G P+ + Y+ I + L K+K + E F EM+ P + ++ +
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A ++ ++E ++P + N+L+ GL G + + + E M+ + +
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRF--FDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N+ P++ ++ C++N F F M G P+ +T++ + L K+
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ F EM+K ++P + +T I L AI++ + E G P + ++
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
L +++ F EM+NR I VT + F N RS
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 13/260 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K N+ +A + F EMV+ +P+ ++ Y + L + +VDEAL ++ M C
Sbjct: 168 GWGKTPNLPKAREIFREMVD-VGCSPD-IVTYGIMVDILCKAGRVDEALDIVKEMDLTIC 225
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFN-LMPNLIMYNAVVGLLCNNND 116
PT +S + I ++ D+ D +G+ N + ++ YNA++G C N
Sbjct: 226 KPTSFIYSVLIHTYGIENRIEDAV------DTFLGMEKNGVKADVAAYNALIGAFCKVNK 279
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
NV+R ++M + G P+S T N+I LI + E F MIK +P
Sbjct: 280 FKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIK-VCEPDADTYTM 338
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I M + +E E A+++W Y+ + +P + +VL+ GL G +S E+M+ +
Sbjct: 339 MIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKG 398
Query: 237 ILIYDVTMQKLKKAFYNESR 256
I VT +L+ E R
Sbjct: 399 IRPSGVTFGRLRHLLIKEGR 418
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 22 FEWNPEH------VLAYETFLITLIRGKQVD------EALKFLRVMKGENCFPTLKFFSN 69
FEW + V AY T + +L + +Q A+K R++ E ++ ++
Sbjct: 43 FEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYAR 102
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
A KL ++ +T + + +++ PNL +N + LC + +V FD
Sbjct: 103 AQ----KLEEAVYTFNVME-----KYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSK- 152
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PDS TY ++ E K + + F EM+ P + + +L A +
Sbjct: 153 DRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDE 212
Query: 190 AIEI 193
A++I
Sbjct: 213 ALDI 216
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
LI + DEA + R M + C P ++ + + + N+ +++W M F +
Sbjct: 309 LIARGETDEAFRVFRRMI-KVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHF--V 365
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ ++ ++ LC DV + + M+ G P +T+ + LIK + +V F
Sbjct: 366 PSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGR-EDVLEF 424
Query: 159 FHEMI 163
+ I
Sbjct: 425 LQQKI 429
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + +M+++ P+ ++A+ L L+R ++ +A+K VMK +
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K + ++ +D MV G L P+ +Y ++ +D V
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTV 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + K +++MI+NE +P+ +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E +W +++ GI P + S VL+ GL G+ + R+ EEML++ +
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F+ + + F+ L +R K S
Sbjct: 543 LIDYNKFAADFHRGGQP--EIFEELAQRAKFS 572
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA M R +P +++ Y T + + ++DEA L M C
Sbjct: 264 GLCKAGKLDEATALLQRMT-RSGCSP-NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD K + + L ++MV G+ +PNL YN+++ + C ++V+
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY--VPNLFTYNSLLDMFCKKDEVERA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ G P+ ++YN + L K KVHE +M+ N P + T I
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
+ + A E++N I E+G P + N L+ GL R EM ++
Sbjct: 440 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499
Query: 237 -ILIYDVTMQKLKKA 250
I+ Y+ + L K+
Sbjct: 500 DIITYNTVIDGLCKS 514
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 36/288 (12%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V A + M+++ +V++Y T + L + +V E + L M NC P
Sbjct: 372 KKDEVERACQLLSSMIQK--GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIM--VGIGFNLM----------------------- 98
+ F+ +D + K +L++++ G NL+
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489
Query: 99 ---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
P++I YN V+ LC + VD ++ F QM+ G PD +TY+++ L K
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + E N M+KN + P + T I + A+EI +L G P +
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
++ + L GRL E ML ++ VT L K F + SR+
Sbjct: 610 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT 657
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+MV R P V++Y T + L + QVDEA + + M C P + + +D +
Sbjct: 104 QMVMR--GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP-D 135
+ D V+L M G+ PN I YN ++ LC+ +D+ + F +M G+ P D
Sbjct: 162 VGDLDGAVELVRKMTERGYR--PNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPD 219
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TY+ I + L+K+ KV + M+ P + ++ + L A + + A +
Sbjct: 220 VFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ +G P + N ++ G LGR+ + EEM++ VT L AF
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339
Query: 256 RS 257
++
Sbjct: 340 KA 341
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK-GEN 59
G+ + G++ A + +M ER + P + + Y + L G+++D AL+ + M+ +
Sbjct: 158 GFCRVGDLDGAVELVRKMTER-GYRP-NAITYNNIMHGLCSGRKLDSALQLFKEMEESGS 215
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +S +D LVK +L + MV G + PN++ Y++++ LC +D
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS--PNVVTYSSLLHGLCKAGKLDE 273
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M G P+ +TYN I + K ++ E + EM+ QP T
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN----VVTYT 329
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLL 213
+LLDA + E AI + ++E G +P + N LL
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
H +++ L L Q +A+ R M + C P ++ ++ L K + ++L
Sbjct: 9 HAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLL 67
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV GF PN+ YN V+ C N V+N +QMV G PD ++Y + L
Sbjct: 68 EEMVDNGF--APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLC 125
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V E +MI+ QP + T + + + A+E+ + E G P
Sbjct: 126 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 185
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N ++ GL + +L + +EM
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEM 210
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G +A F EM + P + Y T + L + ++D+A++ L M
Sbjct: 19 GLCDAGQCSDAVLHFREMSKTC---PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 75
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L K N + + L + MV G P+++ Y V+ LC + VD
Sbjct: 76 APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCP--PDVVSYTTVINGLCKLDQVDEA 133
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R D+M+ G P+ +TY + + + + +M + ++P + +
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193
Query: 181 LLDADEPEFAIEIWNYILENGILPLEA-SANVLLVGLRNLGRLSDVRRFAEEMLNR---- 235
L + + A++++ + E+G P + + + ++ L G++ D R E M+++
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253
Query: 236 RILIYDVTMQKLKKA 250
++ Y + L KA
Sbjct: 254 NVVTYSSLLHGLCKA 268
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EAN E++ + ++P + Y T + + +D+AL+ L+++ + +P + FS
Sbjct: 554 EANNVL-ELMLKNGFDP-GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K +L + M+ G L+P+ + YN ++ C+ + ++ F+ M
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAG--LVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEV 155
G PD+ TY + L+ K ++
Sbjct: 670 CGCEPDNATYTTLVGHLVDKKSYKDL 695
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 39/221 (17%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM + +P+ ++ Y T + L + K+VD A K M + P +S + L K
Sbjct: 490 EMTRKQGCSPD-IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD- 135
+ ++M+ GF+ P I Y ++ C ++D ++ G++PD
Sbjct: 549 WRFMDEANNVLELMLKNGFD--PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606
Query: 136 ----------------------------------SLTYNMIFECLIKNKKVHEVENFFHE 161
++TYN + + + + + F
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666
Query: 162 MIKNEWQPTPLNCATAITMLLDADE-PEFAIEIWNYILENG 201
M + +P T + L+D + E+ +++ G
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KE N+ +A + F EM++ +P+ ++ Y + L + +VDEAL +R M C
Sbjct: 210 GWGKEPNLPKAREVFREMID-AGCHPD-IVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 267
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +S + N V + M G + ++ ++N+++G C N + NV
Sbjct: 268 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG--MKADVAVFNSLIGAFCKANRMKNV 325
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R +M G P+S + N+I LI+ + E + F +MIK +P I M
Sbjct: 326 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKM 384
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E E A ++W Y+ + G+ P + +VL+ GL EEM+ I
Sbjct: 385 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 444
Query: 241 DVTMQKLKKAFYNESR 256
VT +L++ E R
Sbjct: 445 GVTFGRLRQLLIKEER 460
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 27 EHVLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ +L ETF I + R ++VDEA+ VM+ + P L F+ L L K S +
Sbjct: 127 KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK---SKNV 183
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ ++ + P+ Y+ ++ ++ F +M+ G PD +TY+++
Sbjct: 184 RKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 243
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K +V E M + +PT + + + E A++ + + +G+
Sbjct: 244 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 303
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A N L+ R+ +V R +EM ++ +
Sbjct: 304 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 337
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K N+ +A + F EMV+ +P+ ++ Y + L + +VDEA+ ++ M C
Sbjct: 189 GWGKAPNLPKAREIFREMVD-MGCDPD-IVTYGIMVDILCKAGRVDEAVGIVKEMDSSVC 246
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + I ++ D+ +T D+ + ++ +YNA++G C N +
Sbjct: 247 KPTSFIYSVLVHTYGIENRIEDAVYT--FLDMERN---EIEADVAVYNALIGAFCKVNKL 301
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
N +R ++M G P+S T N+I LI E F MIK P
Sbjct: 302 KNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMM 360
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D+ E A+++W Y+ +P + +VL+ GL G S EEM+ + I
Sbjct: 361 IKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGI 420
Query: 238 LIYDVTMQKLKKAFYNESR 256
VT KLK+ E R
Sbjct: 421 RPSSVTFGKLKQLLIKEGR 439
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 22 FEW-----NPEH-VLAYETFLITLIRGKQVD------EALKFLRVMKGEN-CFPTLKFFS 68
FEW N H + AY T + +L + +Q ++ L+++ E C K+
Sbjct: 64 FEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYAR 123
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ K+ ++ +T + + +++ PNL +N+++ LC + +V F+ M
Sbjct: 124 SQ-----KVKEAVYTFNIME-----KYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMK 173
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
PDS TY+++ E K + + F EM+ P + + +L A +
Sbjct: 174 -DQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVD 232
Query: 189 FAIEI 193
A+ I
Sbjct: 233 EAVGI 237
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA M R +P +++ Y T + + ++DEA L M C
Sbjct: 992 GLCKAGKLDEATALLQRMT-RSGCSP-NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 1049
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD K + + L ++MV G+ +PNL YN+++ + C ++V+
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY--VPNLFTYNSLLDMFCKKDEVERA 1107
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ G P+ ++YN + L K KVHE +M+ N P + T I
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
+ + A E++N I E+G P + N L+ GL R EM ++
Sbjct: 1168 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227
Query: 237 -ILIYDVTMQKLKKA 250
I+ Y+ + L K+
Sbjct: 1228 DIITYNTVIDGLCKS 1242
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+AY + L + K++ EA +L VM C+P + +++ +D L K L+D
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G +MP+++ Y+ V+ C +N++D+ F+ ++M PD +TY+ + L K
Sbjct: 535 RMRAAG--VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCK 592
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V + + F EM+ P + T I L ++ E A E+ + + P +
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
L+ GL N RL + R EM ++ L +T L +A
Sbjct: 653 YTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 12/270 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA+ +M+ R P+ V T + L + +D A + LR+ G +C
Sbjct: 414 GFCKAGKLREAHDLLEQMIRR-GCRPD-VACLSTLIDALCKAAAIDSAQELLRMSIGMDC 471
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L K D+MV P+++ YN+VV LC + +++
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWLDVMVK--NRCYPDVVTYNSVVDGLCKSRRINDA 529
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F FD+M G PD +TY+++ K+ + M + + P + + I
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + A +++ +L G P + N L+ GL + ++ E M +
Sbjct: 590 LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+T L N SR LE W+
Sbjct: 650 SITYTCLINGLCNASR--------LEEAWR 671
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 116/286 (40%), Gaps = 36/286 (12%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V A + M+++ +V++Y T + L + +V E + L M NC P
Sbjct: 1100 KKDEVERACQLLSSMIQK--GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIM--VGIGFNLM----------------------- 98
+ F+ +D + K +L++++ G NL+
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217
Query: 99 ---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
P++I YN V+ LC + VD ++ F QM+ G PD +TY+++ L K
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + E N M+KN + P + T I + A+EI +L G P +
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
++ + L GRL E ML ++ VT L K F + S
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 1383
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 13/266 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V A +MV R P V++Y T + L + QVDEA + + M C
Sbjct: 274 GFCKANRVENALWLLEQMVTR--GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 331
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D ++ D V+L M G+ PN I YN ++ + C ND++
Sbjct: 332 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYR--PNAITYNNIMHVFCRRNDMERA 389
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ G PD++ Y+ I K K+ E + +MI+ +P +T I
Sbjct: 390 HQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDA 449
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L A + A E+ + P + ++L+ L RL + + + M+ R
Sbjct: 450 LCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPD 509
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRF 262
++ Y+ + L K SR + D F
Sbjct: 510 VVTYNSVVDGLCK-----SRRINDAF 530
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK-GEN 59
G + G++ A + EM P++V+ + + L +++D AL+ + M+ +
Sbjct: 886 GLCRAGDIGTAYELLKEMPR--HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +S +D LVK +L + MV G + PN++ Y++++ LC +D
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCS--PNVVTYSSLLHGLCKAGKLDE 1001
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M G P+ +TYN I + K ++ E + EM+ QP T
Sbjct: 1002 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN----VVTYT 1057
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLL 213
+LLDA + E AI + ++E G +P + N LL
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 1095
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G ++ A + F EM + H +++ L L Q +A+ R M + C
Sbjct: 170 GFIRAGKILPAYELFDEMNRK--GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTC 226
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L K + ++L + MV GF PN+ YN V+ C N V+N
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF--APNVFSYNTVLHGFCKANRVENA 284
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QMV G PD ++Y + L K +V E +MI+ QP + T +
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ + A+E+ + E G P
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRP 368
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ N+ A K M E + P+ V+ Y + L + VD+A + M G C P
Sbjct: 557 KDNNLDSAFKMLERMKEA-KCVPD-VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ +D L K+N ++ +IM + P+ I Y ++ LCN + ++ +R
Sbjct: 615 LVTYNTLIDGLCKINKVEQAAEMLEIMRKQ--SCTPDSITYTCLINGLCNASRLEEAWRV 672
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+M G PD +TY + L K + VE EM E
Sbjct: 673 LREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE 715
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 11/259 (4%)
Query: 6 GNVVEANKTFGEMVERFEW-NPEHVLAYETF-----LITLIRGKQVDEALKFLRVMKGEN 59
G V++ + + F+W + ++T+ L L+R K+ +AL+ R
Sbjct: 815 GKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLC 872
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F+ + L + D +L M G + N+I++N V+ LC+ +D+
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG--VPQNVILHNVVIKGLCSARKLDS 930
Query: 120 VFRFFDQMVFHGAFP-DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +M G+ P D TY+ I + L+K+ KV + +M+ P + ++ +
Sbjct: 931 ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLL 990
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L A + + A + + +G P + N ++ G LGR+ + EEM++
Sbjct: 991 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050
Query: 239 IYDVTMQKLKKAFYNESRS 257
VT L AF ++
Sbjct: 1051 PNVVTYTVLLDAFCKCGKA 1069
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 8/176 (4%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + YN ++ L ++ +D+ R ++MV +G P+ +YN + K +V
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M+ P ++ T I L D+ + A + + +++ G P + L+ G
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+G L +M R +T + F R + +ER + QM
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC--------RRNDMERAHQVLQM 395
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EAN E++ + ++P + Y T + + +D+AL+ L+++ + +P + FS
Sbjct: 1282 EANNVL-ELMLKNGFDP-GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K +L + M+ G L+P+ + YN ++ C+ + ++ F+ M
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAG--LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEV 155
G PD+ TY + L+ K ++
Sbjct: 1398 CGCEPDNATYTTLVGHLVDKKSYKDL 1423
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KE N+ +A + F EM++ +P+ ++ Y + L + +VDEAL +R M C
Sbjct: 246 GWGKEPNLPKAREVFREMIDA-GCHPD-IVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +S + N V + M G + ++ ++N+++G C N + NV
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG--MKADVAVFNSLIGAFCKANRMKNV 361
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R +M G P+S + N+I LI+ + E + F +MIK +P I M
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKM 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E E A ++W Y+ + G+ P + +VL+ GL EEM+ I
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Query: 241 DVTMQKLKKAFYNESR 256
VT +L++ E R
Sbjct: 481 GVTFGRLRQLLIKEER 496
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 27 EHVLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ +L ETF I + R ++VDEA+ VM+ + P L F+ L L K +
Sbjct: 163 KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 222
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++++ M P+ Y+ ++ ++ F +M+ G PD +TY+++
Sbjct: 223 QEVFENMRD---RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K +V E M + +PT + + + E A++ + + +G+
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 339
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A N L+ R+ +V R +EM ++ +
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + ++ + + + +M+ P+ ++ Y + L + +V+EA+ ++ M C
Sbjct: 218 GWGRAPSLPKMREVYSDMLAA-GCQPD-IVTYGIMVDALCKTGRVEEAVCVVQDMSSRGC 275
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + + +++ D+ V + M G +MP++++YNA++ C
Sbjct: 276 QPTTFIYSILVHTYGVDMRIEDA---VAAFLDMEKDG--IMPDVVVYNALITAFCKVKKF 330
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+N FR D M HG P+S T+N+I LI K E F MIK +P
Sbjct: 331 ENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIK-RCKPDSDTYTMM 389
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D+ E A+++W Y+ LP + +VL+ GL + G +S E+M+ + I
Sbjct: 390 IKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 449
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
T KL++ E R +D D L + K
Sbjct: 450 RPPGSTFGKLRQLLLKEGR--KDVLDFLVEKMK 480
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + I VDEA+K L VMK C PT+ ++ +D L K V L
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G P+++ Y++++ + + FD+MV G D TY+++ CL K+
Sbjct: 589 MEKQGCE--PSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V + + F M + +P N T ++ L+ ++ +FA++I+N + E+ ++P
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N+++ GL R+ + + + M N+ IL
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNIL 735
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G+V EA K E++++ E P V+ Y T + L + ++DEA+ LR M+ + C P++
Sbjct: 542 GHVDEAVKLL-EVMKKHECIPT-VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S+ + K + ++ L+D MV G + ++ Y+ V+ LC ++DVD F
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEMVRKG--CVADVSTYSLVINCLCKSDDVDQALDVFG 657
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P Y + L+K++K+ F+E+ ++ P + L+ ++
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYD 241
+ A ++ + + ILP + LL GL GRL + + EE ++ Y
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777
Query: 242 VTMQKLKKA 250
M L K
Sbjct: 778 SLMDVLGKG 786
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 35/282 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA F +M E E + V+AY + + L +G ++ AL R M + C
Sbjct: 747 GLGKSGRLEEAFNMFTKMTE--EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804
Query: 61 FPTLKFFSNALDILVK---------------LNDSTHTVQLWDIMV-GIGFNLM------ 98
P + +S+ +D L K T V ++ ++ G M
Sbjct: 805 VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALE 864
Query: 99 -----------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
PN++ YN ++ L ++ + ++M G PD +TYN++ + +
Sbjct: 865 LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG 924
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K V E E++F M + P + + I L D+ A E+++ + E G P
Sbjct: 925 KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVV 984
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+ NVL+ L G++ + EM + + +T+ +K+
Sbjct: 985 TYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 18/267 (6%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
E+ F EMV + V Y + L + VD+AL MK E P L +
Sbjct: 616 ESLSLFDEMVRK--GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKT 673
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L LVK +Q+++ + +L+P+ +YN +V L +N VD + D M
Sbjct: 674 LLSSLVKDEKIDFALQIFNELQE--SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKN 731
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PD TY + + L K+ ++ E N F +M + +P + + + +L +
Sbjct: 732 QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSH 791
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQ 245
A+ I+ + + +P + + L+ L GR+ + F E +++ + +Y +
Sbjct: 792 ALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLID 851
Query: 246 KLKKAFYNESRSMRDR----FDSLERR 268
K + M DR F+ ++RR
Sbjct: 852 SFGK------KGMVDRALELFEEMQRR 872
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 18/256 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLA-YETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K +V +A FG M E E +L Y+T L +L++ +++D AL+ ++ + P
Sbjct: 645 KSDDVDQALDVFGRMKEE---GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ ++ LVK N +L D M N++P+L Y +++ L + ++ F
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ--NILPDLFTYTSLLDGLGKSGRLEEAFN 759
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +M G PD + Y + + L K K+ F M K P + ++ L+
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS----LI 815
Query: 183 DADEPEFAIEIWNYILEN----GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-- 236
D+ E +E Y EN G P + L+ G + EEM R+
Sbjct: 816 DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP 875
Query: 237 --ILIYDVTMQKLKKA 250
I+ Y+ + L KA
Sbjct: 876 PNIVTYNNLLSGLAKA 891
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 105/240 (43%), Gaps = 4/240 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L L + +++EA M E P + +++ +D+L K +H + ++
Sbjct: 738 LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +P+++ Y++++ L V+ + FF+ + G P+ Y+ + + K
Sbjct: 798 AMAKK--RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V F EM + + P + ++ L A A ++ + + G +P +
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR--DRFDSLE 266
N+L+ G+ +G + + + + M + I+ +T L ++ + + + FDS+E
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G + A + EM+ + +P V + + L++ +DEA KF MK C
Sbjct: 297 FNRSGRLDPAAEPIQEMI-KSGIDP-GVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ ++ L K +++ M N P+ I YN ++ L + D
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKE--NNCSPDAIAYNTLIDGLGKAGEADMAC 412
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F +M G P+ TYN++ L K + E FH++ + P T I +L
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472
Query: 182 LDADEPEFAIEIWNYILENG 201
+ + + I ++E G
Sbjct: 473 GKGGQMDKVLAIIKEMVEKG 492
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 9/234 (3%)
Query: 24 WNPEHVLAYE---TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
W H ++ + L T V AL+ MK C P+ ++ L++LVK
Sbjct: 209 WKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVK-GGF 267
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
H+ + +G F + P+ + V + +D +M+ G P T+
Sbjct: 268 YHSAVIVFGKLG-QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFT 326
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
++ + L+K+ + E FF+ M P + T + L A E A E++ + EN
Sbjct: 327 VLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN 386
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
P + N L+ GL G +EM +R ++ Y++ + L KA
Sbjct: 387 NCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKA 440
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 4/221 (1%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
FG++ +F P+ + F+ + R ++D A + ++ M P + F+ +D L
Sbjct: 275 FGKL-GQFRIQPD-AQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDAL 332
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
VK + + ++ M + PN++ Y +V L ++ F +M + P
Sbjct: 333 VKSGNIDEACKFFNGMKNL--RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSP 390
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D++ YN + + L K + F EM P I++L A A +++
Sbjct: 391 DAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLF 450
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + E G +P + N L+ L G++ V +EM+ +
Sbjct: 451 HDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEK 491
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + +M++ P+ ++A+ L L+R + +A+K VMK +
Sbjct: 16 GWCRVRNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 73
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K + ++ +D MV G L P+ +Y ++ +D V
Sbjct: 74 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTV 131
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + K +++MI+NE +P+ +
Sbjct: 132 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 191
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E +W+ +++ GI P + S VL+ GL + G+ + R+ EEML++ +
Sbjct: 192 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 251
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F+ + + F+ L +R K S
Sbjct: 252 LIDYNKFAADFHRGGQP--EIFEELAQRAKFS 281
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 4/248 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F +++ + + P+ V Y + L+ L R +DEA + + M C P +S
Sbjct: 205 EAMKLFKDVIAK-GYMPDTV-TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L ++ + ++L++ M F+ P++++ NAV+ +LC VD+ + ++M
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFS--PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSK 320
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
GA PD +TYN++ + L K V + F M+ N P ++ + + L ++
Sbjct: 321 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 380
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ ++E ++P + N+L+ GL G+L + + + M +L VT L
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMH 440
Query: 250 AFYNESRS 257
+ R+
Sbjct: 441 GLCRDKRT 448
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + GN+ + + EM E+ ++P+ VL + L + K+VD+A K L M
Sbjct: 266 GHCRVGNMARCLELYEEMTEK-RFSPD-VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGA 323
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K N +L+ MV G P+++ Y+ V+ LC N V +
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG--CAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+M+ PD +T+N++ + L K K+ E ++ M ++ P + C T +
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A+ ++ Y++E G + N++L GL G+L+ F + M+
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMV 494
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 2/232 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ N+ A K EM + + P+++ Y T L L R +V EA +F M
Sbjct: 89 GLCKDENIERAYKLLEEMASK-GYEPDNI-TYNTILSGLCRMGKVSEAKQFFDSMPSRGY 146
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K L+ M + P+LI YN ++ C D
Sbjct: 147 SPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEA 206
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F ++ G PD++TYN I L + + E E F +M+ + P + ++
Sbjct: 207 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSG 266
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+E++ + E P N ++ L ++ D + EEM
Sbjct: 267 HCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 6/240 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V +A++ F MV+ P+ +++Y L L + +V +A M
Sbjct: 336 GLCKTNLVDKAHELFSTMVDN-GCAPD-IVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D L K L D+M N++P+ + ++ LC + D
Sbjct: 394 VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE--HNVLPDGVTCTTLMHGLCRDKRTDEA 451
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN--EWQPTPLNCATAI 178
R F MV G D L +N++ L + K+ + FF M+K+ E+ P + T +
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L++A + A++ + + +G P + N L+ GLR GR R + M + L
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 10/253 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G V EA++ F +M+ER + +AY + L + + ++ A K L M + P
Sbjct: 57 RAGKVDEADELFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPD 114
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L ++ + Q +D M G++ P+++ YN ++ L V +
Sbjct: 115 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS--PDVVAYNGLLDALYKEGKVAEAWGL 172
Query: 124 FD--QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F M PD +TYN + + + +K E F ++I + P + + + L
Sbjct: 173 FKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----I 237
+ A E++ ++++G P A+ +++L G +G ++ EEM +R +
Sbjct: 233 ARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV 292
Query: 238 LIYDVTMQKLKKA 250
L+ + + L KA
Sbjct: 293 LLCNAVIDMLCKA 305
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + +V EAL+ + M + P + ++ +D L + +L+
Sbjct: 10 VVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFH 69
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + N + YNA++ LC + +++ ++ ++M G PD++TYN I L +
Sbjct: 70 KMIERGCS--ANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI-EIWN 195
KV E + FF M + P A LLDA E + E W
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPD----VVAYNGLLDALYKEGKVAEAWG 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ Y+ ++ LC V ++M G PD TY +I + L + KV E +
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
FH+MI+ + I L + E A ++ + G P + N +L GL
Sbjct: 68 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+G++S+ ++F + M +R V L A Y E +
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 165
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +S + L K T +++ + M G N P++ Y +V LC VD
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVN--PDVATYTIIVDRLCRAGKVDEAD 65
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F +M+ G +++ YN + L K++ + EM ++P + T ++ L
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ A + ++ + G P + N LL L G++++
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEA 169
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G PD +TY+ I L K KV E EM + P + L A +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A E+++ ++E G + N L+ GL + + EEM ++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 109
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 8/269 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW +E N+ + + EM E FE + V+ Y + + ++ D+A++ M+ +N
Sbjct: 152 GWGQEKNLSRLMEVYNEMKDEGFEPD---VVTYGILINAHCKSRRYDDAIELFHEMEAKN 208
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P+ + ++ L + ++ +++ GF +P YNAVVG C + +D+
Sbjct: 209 CKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGF--VPEAPTYNAVVGAYCWSERMDD 266
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V R D+M G P + TY++I LI+ K + F +M QP+ +
Sbjct: 267 VQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVR 326
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
M + D + AI++W+ + GILP+ + L+ L + +L + + +EML+ I
Sbjct: 327 MFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRP 386
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERR 268
LK+ +E + +D ER+
Sbjct: 387 PAQLFSNLKQNLLDEGK--KDTVVVFERK 413
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ L LIR + A + M E C P++ + + + + +++WD M
Sbjct: 286 YDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMK 345
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G ++P + M++ ++ LC+ + +D +F +M+ G P + ++ + + L+ K
Sbjct: 346 AKG--ILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGK 403
Query: 152 VHEVENFFHEMIKNEWQP 169
V F ++ K P
Sbjct: 404 KDTVVVFERKLDKLRKAP 421
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + +M++ P+ ++A+ L L+R + +A+K VMK +
Sbjct: 306 GWCRVRNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K + ++ +D MV G L P+ +Y ++ +D V
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTV 421
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + K +++MI+NE +P+ +
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E +W+ +++ GI P + S VL+ GL + G+ + R+ EEML++ +
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F+ + + F+ L +R K S
Sbjct: 542 LIDYNKFAADFHRGGQP--EIFEELAQRAKFS 571
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + +M++ P+ ++A+ L L+R + +A+K VMK +
Sbjct: 307 GWCRVRNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K + ++ +D MV G L P+ +Y ++ +D V
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG--LQPDAAVYTCLITGFGTQKKLDTV 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + K +++MI+NE +P+ +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E +W+ +++ GI P + S VL+ GL + G+ + R+ EEML++ +
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ K F+ + + F+ L +R K S
Sbjct: 543 LIDYNKFAADFHRGGQP--EIFEELAQRAKFS 572
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + A K F EM+ER +LAY L L + VD K + M
Sbjct: 217 GWARIRDASGARKVFDEMLERN--CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + D ++ D M ++L+PN+ +N ++ LC N VD+
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR--YDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M+ GA PD+ TYN I + +V+ M + + P + +
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + A EIW + E P A+ V++ GL R G+L + R+ E M++ I
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 453 YSTTVEMLR 461
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
GF ++P+ Y+ +V D + FD+M+ D L YN + + L K+ V
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F EM +P + A I DA + A ++ + + ++P + N ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
L ++ D +EM+ +
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQK 342
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 9/258 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K N+ A + F EMVE +P+ V+ Y + L + +VDEA++ ++ M NC
Sbjct: 190 GWGKAPNLPRAREVFREMVEA-GCDPD-VVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNC 247
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVD 118
PT +S +LV H ++ D + + + +++ YNA++G C N
Sbjct: 248 RPTSFIYS----VLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFK 303
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
NV R +M +G P+S T N+I +I + F MIK +P I
Sbjct: 304 NVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIK-LCEPDADTYTMMI 362
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + +E E A++IW Y+ +P + + L+ GL + EEM+ + I
Sbjct: 363 KMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIR 422
Query: 239 IYDVTMQKLKKAFYNESR 256
+T +L++ E R
Sbjct: 423 PSRITFGRLRQLLIKEGR 440
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+L ETF I + R +VDEA+ VM + P L F+ L L K N+ +
Sbjct: 109 MLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQE 168
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++D M G +P+ Y+ ++ ++ F +MV G PD +TY ++ +
Sbjct: 169 IFDAMKG---QFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDV 225
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K +V E EM +PT + + E AI+ + + + GI
Sbjct: 226 LCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKAD 285
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ + + +V R +EM
Sbjct: 286 VVAYNALIGAFCKVNKFKNVHRVLKEM 312
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW ++ N+++ N+ + EM R E V+ + + + ++ DEA++ M+ +N
Sbjct: 269 GWGQDQNLLKLNEVYREM--RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ F ++ L ++ ++ + GF P YNAVVG C + +
Sbjct: 327 KPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGF--APEAPTYNAVVGAYCWSMKMAYA 384
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAIT 179
+R D+M G P+S TY++I LIK +K E + F M + +PT I
Sbjct: 385 YRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIR 444
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
M + + + AI+IW+ + G+LP + L+ L + +L D + +EML+ I
Sbjct: 445 MFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP 504
Query: 240 YDVTMQKLKKAFYNESR 256
LK+A ++ R
Sbjct: 505 PATMFSNLKQALLDDGR 521
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNM 141
V+ ++ M GF + + +N ++ LC + +V FD+M HG F PD +Y +
Sbjct: 209 AVESFEKMEKFGFQM--GVSDFNRLLDTLCKSRNVKKAQEVFDKMK-HGRFKPDIKSYTI 265
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ E +++ + ++ + EM ++P + I A + + AI +++ +
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKN 325
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I P L+ GL + RL + F E++
Sbjct: 326 IKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 18/192 (9%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
T+ +V + W+ + AY + VDE M+ P + + L
Sbjct: 367 TYNAVVGAYCWSMKMAYAY----------RMVDE-------MRKSGVGPNSRTYDIILHH 409
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L+K S ++ M P L Y+ ++ + CN VD + +D+M G
Sbjct: 410 LIKGRKSKEAYSVFQRM-SREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVL 468
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P ++ + L K+ + +F EM+ +P + LLD + A+ +
Sbjct: 469 PGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLM 528
Query: 194 WNYILENGILPL 205
I + PL
Sbjct: 529 AEKIXKLRKAPL 540
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW ++ N+++ N+ + EM R E V+ + + + ++ DEA++ M+ +N
Sbjct: 269 GWGQDQNLLKLNEVYREM--RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ F ++ L ++ ++ + GF P YNAVVG C + +
Sbjct: 327 KPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGF--APEAPTYNAVVGAYCWSMKMAYA 384
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAIT 179
+R D+M G P+S TY++I LIK +K E + F M + +PT I
Sbjct: 385 YRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIR 444
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
M + + + AI+IW+ + G+LP + L+ L + +L D + +EML+ I
Sbjct: 445 MFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP 504
Query: 240 YDVTMQKLKKAFYNESR 256
LK+A ++ R
Sbjct: 505 PATMFSNLKQALLDDGR 521
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNM 141
V+ ++ M GF + + +N ++ LC + +V FD+M HG F PD +Y +
Sbjct: 209 AVESFEKMEKFGFQM--GVSDFNRLLDTLCKSRNVKKAQEVFDKMK-HGRFKPDIKSYTI 265
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ E +++ + ++ + EM ++P + I A + + AI +++ +
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKN 325
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I P L+ GL + RL + F E++
Sbjct: 326 IKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 18/192 (9%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
T+ +V + W+ + AY + VDE M+ P + + L
Sbjct: 367 TYNAVVGAYCWSMKMAYAY----------RMVDE-------MRKSGVGPNSRTYDIILHH 409
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L+K S ++ M P L Y+ ++ + CN VD + +D+M G
Sbjct: 410 LIKGRKSKEAYSVFQRM-SREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVL 468
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P ++ + L K+ + +F EM+ +P + LLD + A+ +
Sbjct: 469 PGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLM 528
Query: 194 WNYILENGILPL 205
I + PL
Sbjct: 529 AEKIKKLRKAPL 540
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+VEA +T+ EM+++ + P+ ++A+ T L L++ K+ +A+K VMK +
Sbjct: 381 GWCRIKNLVEAGRTWNEMIDK-GFKPD-IIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 438
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K V+ +D MV G P+ +Y ++ N +D V
Sbjct: 439 SPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSG--CQPDAAVYTCLITGFGNQKKMDKV 496
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G D TYN + + + + + + +MI+N QPT +
Sbjct: 497 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKS 556
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E +W + G P + S V + GL GR + R+ EEM+ + +
Sbjct: 557 YFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAP 616
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+ K F + D + L R+ K
Sbjct: 617 QLDYNKFAADFSRAGKP--DILEELARKMK 644
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 6/245 (2%)
Query: 10 EANKTFG--EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
E K G E+++R+ ++ V L L R K EA ++ + P L+ +
Sbjct: 318 ERKKAVGVFELMKRYNFD-AGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTY 375
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L+ ++ + + W+ M+ GF P++I ++ ++ L + + F+ M
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFK--PDIIAHHTMLEGLLKCKKKSDAIKLFEVM 433
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G P+ TY ++ L K K+ E +F EM+ + QP IT + +
Sbjct: 434 KAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKM 493
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ + + E G + N L+ + N D R ++M+ I T +
Sbjct: 494 DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMM 553
Query: 248 KKAFY 252
K+++
Sbjct: 554 MKSYF 558
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 4/235 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA K F +++ + + P+ V Y + L+ L R +DEA + + M C P
Sbjct: 231 KEGKTDEAMKLFKDVIAK-GYMPDTV-TYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S L + ++ + M IG +P+++ YN ++ LC N VD
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIG--AVPDVVTYNILLDGLCKTNLVDKAHEL 346
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F MV +G PD ++Y+++ L K KVH+ F MI+ + P + + L
Sbjct: 347 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A + + A ++ + + +G P + N L+ GLR GR R + M + L
Sbjct: 407 AGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 17/242 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G V EAN+ + EMV P + Y + L + ++ EA++ + M +
Sbjct: 52 GYAKKGRVDEANRLYEEMVS-VGLEPS-IYTYNSLLNAFCKETKMKEAMELFKTMAEKGF 109
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S + L K T ++ L+ M+ G + N + YNA++ LC + +++
Sbjct: 110 EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCS--ANTVAYNALINGLCKDENIER 167
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++ ++M G PD++TYN I L + KV E + FF M + P A
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD----VVAYN 223
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
LLDA + + A++++ ++ G +P + N +L+GL + + AEEM +
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE----AEEMFKK 279
Query: 236 RI 237
+
Sbjct: 280 MV 281
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ N+ A K EM + + P+++ Y T L L R +V EA +F M
Sbjct: 158 GLCKDENIERAYKLLEEMASK-GYVPDNI-TYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K + ++L+ ++ G+ MP+ + YN+++ L +++D
Sbjct: 216 SPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY--MPDTVTYNSILLGLARKSNMDEA 273
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +MV G P+ TY+++ + KKV + EM K P + +
Sbjct: 274 EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 333
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L + + A E+++ +++NG P S +V+L GL ++ D R + M+ R+
Sbjct: 334 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 393
Query: 237 ILIYDVTMQKLKKAF-YNESRSMRDRF 262
++ +++ M L KA +E++ + D+
Sbjct: 394 VVTFNILMDGLCKAGKLDEAKDLLDQM 420
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 5/230 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGENCFP 62
KE + EA + F M E+ + P+ V+ Y T + L + +V EAL+ L M C
Sbjct: 90 KETKMKEAMELFKTMAEK-GFEPD-VVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSA 147
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ ++ L K + +L + M G+ +P+ I YN ++ LC V +
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEMASKGY--VPDNITYNTILSGLCRMGKVSEAKQ 205
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
FFD M G PD + YN + + L K K E F ++I + P + + + L
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A E++ ++ +G P A+ +++L G ++ D + EEM
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 11/273 (4%)
Query: 1 GWEKEGNVVEA-NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V EA F +M+ER + +AY + L + + ++ A K L M +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIER--GCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ L L ++ + Q +D M G++ P+++ YN ++ L D
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS--PDVVAYNGLLDALYKEGKTDE 237
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F ++ G PD++TYN I L + + E E F +M+ + P + ++
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
A + + A ++ + + G +P + N+LL GL + M++
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Query: 237 -ILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
I+ Y V + L K N+ R FD + R
Sbjct: 358 DIVSYSVVLNGLCKT--NKVHDARVLFDRMIER 388
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + V+ C + + ++ F+QM+ +G PD + YN++ + K +V E
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ EM+ +P+ + + + + A+E++ + E G P + + ++ GL
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
G++++ A EML +++
Sbjct: 126 TGKVTE----ALEMLFHKMI 141
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 89/234 (38%), Gaps = 38/234 (16%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P F L K +L++ M+ G + P+ I YN ++ VD
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGIS--PDGIEYNILIDGYAKKGRVDE 61
Query: 120 VFRFFDQMVFHG-------------AF----------------------PDSLTYNMIFE 144
R +++MV G AF PD +TY+ I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 145 CLIKNKKVHE-VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K KV E +E FH+MI+ + I L + E A ++ + G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
P + N +L GL +G++S+ ++F + M +R V L A Y E ++
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+ + + + EM++ P+ ++ Y + +L + +V+EA++ ++ M C
Sbjct: 213 GWGRAPNLPKMREVYSEMLDA-GCEPD-IVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGC 270
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT +S + + +++ D+ T D+ ++P++++YNA+V C
Sbjct: 271 QPTTYIYSVLVHTYGVEMRIEDAVAT--FLDMEKD---GIVPDIVVYNALVSAFCKAKKF 325
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+N FR + M HG +S T+N+I LI + E F MIK QP
Sbjct: 326 ENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMM 384
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I M + D+ E A+++W Y+ LP + +VL+ GL + +S E+M+ + I
Sbjct: 385 IKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGI 444
Query: 238 LIYDVTMQKLKKAFYNESR 256
T KL++ E R
Sbjct: 445 RPPGSTFGKLRQLLLKEGR 463
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 22 FEWNPEH--------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
FEW V +Y T + +L + +Q + VM+ E ++ F +
Sbjct: 86 FEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAV-NVETFGIIMRK 144
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V +++M G ++PNL +N+++G LC + +V FD+M + F
Sbjct: 145 YARAQKVDEAVYTFNVMEKYG--VVPNLAAFNSLLGALCKSKNVRKAQEIFDKM--NSRF 200
Query: 134 -PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD+ TY+++ E + + ++ + EM+ +P + + L E A+
Sbjct: 201 SPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVR 260
Query: 193 IWNYILENGILPLEASANVLL 213
+ + G P +VL+
Sbjct: 261 VVQDMTSRGCQPTTYIYSVLV 281
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 15/273 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V +A F EM +P+ V+ Y T + L + ++VD A + M +
Sbjct: 202 GFFNEGQVDKAYSLFLEM----GVSPD-VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K + ++ MV G + P+ + YN ++ LC VD
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG--VKPSNVTYNTIIDGLCKAQAVDRA 314
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM+ G PD +TYN I + L K + + + E F +MI +P L I
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L A + A ++ +++ G+ P + N L+ G + G+ +V + +EM L
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFDSLERR 268
+ Y + + L K NE+RS+ FDS+ R+
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSL---FDSMIRK 464
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 35/271 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + E + MV +P H + + T + + +DE + MK +
Sbjct: 479 GYGKKGALSEMHDLLNLMVAN-GISPNHRI-FNTVICAYAKRAMIDEVMHIFIKMKQQGL 536
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FN----------------- 96
P + + +D L KL V ++ M+ G FN
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ P+++ +N V+ LC V R D MV G PD ++YN + +
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHC 656
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
++ E M+ +P ++ T + A + A ++ +L G+ P
Sbjct: 657 FASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ N +L GL GR S+ R M+ R L
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKL 747
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V A F +MV++ P +V Y T + L + + VD A + M
Sbjct: 269 GLCKAQEVDMAEGVFQKMVDK-GVKPSNV-TYNTIIDGLCKAQAVDRAEGVFQQMIDRGV 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K ++ M+ G + P+ + Y ++ LC VD
Sbjct: 327 KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG--VKPDNLTYTIIIDGLCKAQSVDRA 384
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM+ G P++ TYN + + + EV EM ++ +P +
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + A +++ ++ GI P ++L G G LS++
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 7/222 (3%)
Query: 17 EMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
E+V+R + H V Y L L + + +EA M + P++ + L
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
K + L ++MV G + PN ++N V+ +D V F +M G
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGIS--PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
P+ +TY + + L K +V + F++MI P + + + L D+ E
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
E++ +L GI P N +L L GR+ + RR + M+
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 109/286 (38%), Gaps = 47/286 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V A F +M++R P+HV Y T + L + + +D+A + M +
Sbjct: 304 GLCKAQAVDRAEGVFQQMIDR-GVKPDHV-TYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K ++ M+ G + PN YN ++ + + V
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG--VKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M H PD TY ++ + L KN K +E + F MI+ +P+ T +
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS----VTIYGI 475
Query: 181 LLDADEPEFAI----EIWNYILENGILP------------------------------LE 206
+L + A+ ++ N ++ NGI P
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535
Query: 207 ASANVLLVG-----LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
S NV+ G L LGR+ D +M+N + +V L
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++++Y T L + ++D A R M + P ++ ++ L+ L + + +L+
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELY 738
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M I + ++ Y+ ++ C NN D F+ F + D +T+N++ + L
Sbjct: 739 VNM--IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796
Query: 148 KNKKVHEVENFFHEMIKNEWQPT 170
K + + + F + N P+
Sbjct: 797 KGGRKEDAMDLFAAIPANGLVPS 819
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 39/190 (20%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVF---HGAFPDSLTYNM--------------- 141
++ YN ++ LC+ + MV PD ++YN+
Sbjct: 154 GVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAY 213
Query: 142 -----------------IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
I + L K ++V E+ F +M++ +P + T I L A
Sbjct: 214 SLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIY 240
E + A ++ +++ G+ P + N ++ GL + ++M++R + + Y
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333
Query: 241 DVTMQKLKKA 250
+ + L KA
Sbjct: 334 NTIIDGLCKA 343
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 9/258 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KE N+ +A + F EMV+ + ++ Y + L + +VDEAL +R M C
Sbjct: 211 GWGKEPNLPKAREVFREMVD--AGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 268
Query: 61 FPTLKFFSNALDILVKL-NDSTHTVQLWDIMVGIGFNLM-PNLIMYNAVVGLLCNNNDVD 118
PT +S +LV T + D + + + M ++ ++N+++G C N +
Sbjct: 269 KPTTFIYS----VLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMK 324
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
NV+R +M G P+S + N+I LI + E + F +MIK +P I
Sbjct: 325 NVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIK-VCEPDADTYTMMI 383
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + E E A ++W Y+ + G+ P + +VL+ GL EEM+ I
Sbjct: 384 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIR 443
Query: 239 IYDVTMQKLKKAFYNESR 256
T +L++ E R
Sbjct: 444 PSGATFGRLRQLLLKEDR 461
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 27 EHVLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ +L ETF I + R ++VDEA+ VM+ + P L F+ L L K S +
Sbjct: 128 KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK---SKNV 184
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ +I + P+ Y+ ++ ++ F +MV G+ PD +TY+++
Sbjct: 185 RKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMV 244
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K +V E M + +PT + + E A++ + + +G+
Sbjct: 245 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMK 304
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A N L+ R+ +V R +EM ++ +
Sbjct: 305 ADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGV 338
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + A K F EM+E +LAY L L + VD A K + M
Sbjct: 217 GWARIRDASGARKVFDEMLE--NNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGL 274
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + +D Q+ D M ++L+PN+ +N ++ LC N VD+
Sbjct: 275 KPDAYSFAIFIHSYCDASDVHSAYQVLDRMKR--YDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M+ GA PD+ TYN I + +V+ M + + P + +
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + EIW + E P A+ V++ GL R G+L + R+ E M++ I
Sbjct: 393 LIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 453 YSTTVEMLR 461
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
GF ++P+ Y+ +V D + FD+M+ + D L YN + + L K+ V
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVD 260
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F EM +P + A I DA + A ++ + + ++P + N ++
Sbjct: 261 GAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHII 320
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
L ++ D +EM+ +
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQK 342
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K N++EA + EM+++ + P+ ++A+ L L+R KQ +A+K VMK +
Sbjct: 241 GWCKVKNLMEAGSVWNEMIDK-GFKPD-IVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGP 298
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L + + V+ + M+ G P+ +Y ++ N +D V
Sbjct: 299 SPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCK--PDAAVYTCLITGFGNRKRMDMV 356
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD LTYN + + + + K + + +M ++ +PT +
Sbjct: 357 YDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKS 416
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E +W+ + G P + S VL+ GL + GR + ++ EEML +
Sbjct: 417 YFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEK 471
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L +L R K EA +KG P L+ ++ L+ K+ + +W+ M+ G
Sbjct: 204 LLDSLGRAKLGKEAQALFENLKGRFT-PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKG 262
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P+++ +N ++ L + + + F M G PD +Y ++ L + K+ E
Sbjct: 263 FK--PDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEE 320
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+F EMI + +P IT + + ++ + E G P + N L+
Sbjct: 321 AVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIK 380
Query: 215 GLRNLGRLSDVRRFAEEMLNRRI 237
+ L D R ++M I
Sbjct: 381 LMTRLKMPDDAARIYKKMTQSGI 403
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 6/213 (2%)
Query: 23 EWNPEHVLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
E + VL +TF I + K+ +A+ +MK N ++ ++ LD L +
Sbjct: 154 EMGGKGVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKL 213
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
L++ + G PNL Y ++ C ++ +++M+ G PD + +
Sbjct: 214 GKEAQALFENLKG---RFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAH 270
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N++ E L+++K+ + F M P + I L + E A+E + +++
Sbjct: 271 NIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMID 330
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+G P A L+ G N R+ V +EM
Sbjct: 331 SGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEM 363
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + GN+ EA + FGEM + +V Y + +L R Q+ A M C
Sbjct: 207 GWCRAGNISEAERVFGEM--KVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGC 264
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + I VK + +Q+++ M +G P+ + YN ++ C + ++++
Sbjct: 265 QPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCE--PDTVTYNFLIETHCKDENLEDA 322
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P++ T+N +F C+ K V+ + +M + + + T + M
Sbjct: 323 IKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKM 382
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
+ + + +++ + EN I P + VL+ +G ++ +F EM++ + L
Sbjct: 383 FVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRP 442
Query: 239 ---IYDVTMQKLKKA 250
+YD+ +Q+L+KA
Sbjct: 443 SLPVYDMVLQQLRKA 457
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 33 ETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
ETFLI + +R EA+ M+ NC P FS + IL + ++ + +D
Sbjct: 130 ETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFD- 188
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ P++I+Y +V C ++ R F +M G P+ TY+++ + L +
Sbjct: 189 --SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRC 246
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ + F EM+ QP + + + + + A E ++++N + G P +
Sbjct: 247 GQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTY 306
Query: 210 NVLL 213
N L+
Sbjct: 307 NFLI 310
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G EA F M E + P+ + A+ + L R ++ +A +F +K +
Sbjct: 139 YVRAGLAAEAIHAFNRM-EDYNCKPDKI-AFSILISILCRERRASQAQEFFDSLK-DKFE 195
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++N + + + + +++ M G + PN+ Y+ V+ LC +
Sbjct: 196 PDVIVYTNLVRGWCRAGNISEAERVFGEMKVAG--IKPNVYTYSIVIDSLCRCGQITRAH 253
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F +M+ G P+S+TYN + +K + +V +++M + +P + I
Sbjct: 254 DIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETH 313
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ E AI++ + + G P ++ N L + LG ++ R ++M
Sbjct: 314 CKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANT 373
Query: 242 VTMQKLKKAF 251
VT L K F
Sbjct: 374 VTYNTLMKMF 383
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY + + + DEA+K M+ C
Sbjct: 268 GWGHEKDLLMLKAVYQEMLD-AGIKPD-VVAYGMLISAFCKSGKCDEAIKVFHEMEESGC 325
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L + ++ + + GF + + NAV+G C + +
Sbjct: 326 MPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPM--EVPTCNAVIGAYCRALEFHHA 383
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M G P++ TY++I LIK++K+ E N F M ++ +P + M
Sbjct: 384 FKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGM 443
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+++W + E G+LP + L+ GL RL + + +EML++ I
Sbjct: 444 FCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPP 503
Query: 241 DVTMQKLKKAFYNESR 256
LK+A R
Sbjct: 504 GQLFSNLKEALVEGGR 519
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 5/190 (2%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
L+ +TF I + R ++V EA++ M L ++ +DIL K
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ M G +P+L Y ++ + D+ + + +M+ G PD + Y M+
Sbjct: 245 IFKEMKRKG-RFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISA 303
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ K E FHEM ++ P+P I L + + A++ + E+G P+
Sbjct: 304 FCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESG-FPM 362
Query: 206 EASANVLLVG 215
E ++G
Sbjct: 363 EVPTCNAVIG 372
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVH 153
F L +L YN ++ +L + V F +M G F PD TY ++ E K +
Sbjct: 217 FGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLL 276
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + EM+ +P + I+ + + + AI++++ + E+G +P +L+
Sbjct: 277 MLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLI 336
Query: 214 VGLRNLGRLSDVRRF 228
GL ++ RL + ++
Sbjct: 337 NGLGSMERLDEALKY 351
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY + + + DEA+K M+ C
Sbjct: 268 GWGHEKDLLMLKAVYQEMLD-AGIKPD-VVAYGMLISAFCKSGKCDEAIKVFHEMEESGC 325
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L + ++ + + GF + + NAV+G C + +
Sbjct: 326 MPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPM--EVPTCNAVIGAYCRALEFHHA 383
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M G P++ TY++I LIK++K+ E N F M ++ +P + M
Sbjct: 384 FKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGM 443
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+++W + E G+LP + L+ GL RL + + +EML++ I
Sbjct: 444 FCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPP 503
Query: 241 DVTMQKLKKAFYNESR 256
LK+A R
Sbjct: 504 GQLFSNLKEALVEGGR 519
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 5/190 (2%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
L+ +TF I + R ++V EA++ M L ++ +DIL K
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ M G +P+L Y ++ + D+ + + +M+ G PD + Y M+
Sbjct: 245 IFKEMKRKG-RFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISA 303
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ K E FHEM ++ P+P I L + + A++ + E+G P+
Sbjct: 304 FCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESG-FPM 362
Query: 206 EASANVLLVG 215
E ++G
Sbjct: 363 EVPTCNAVIG 372
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVH 153
F L +L YN ++ +L + V F +M G F PD TY ++ E K +
Sbjct: 217 FGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLL 276
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + EM+ +P + I+ + + + AI++++ + E+G +P +L+
Sbjct: 277 MLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLI 336
Query: 214 VGLRNLGRLSDVRRF 228
GL ++ RL + ++
Sbjct: 337 NGLGSMERLDEALKY 351
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V EA + +MVE+ P+ ++A+ + + +V EA + L + C
Sbjct: 148 GFCKAQRVDEAYQLLLDMVEKKSAKPD-IVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + + +QL+ ++ + PN++ +NA++ LC + +++
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM D+ TY + + L K + EV F EM++ P+ + T +
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
A + A ++ ++ GI P + VLL GL G++ F E++L R
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 238 -LIYDVTMQKLKKA 250
++Y ++ KA
Sbjct: 387 AVVYSALVRGCCKA 400
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ EA + F + R +V+ + + L + +++ A + ++ MK +
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ +D L K ++ ++++ M+ G N P+++ Y +V C + +
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN--PSVVTYTTLVHAHCKAGSLQDA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV G PD TY ++ E L +N KV FF ++++ P + + +
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
A + A++ + +L+ + P A+ +L+ L GR
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V EA + +MVE+ P+ ++A+ + + +V EA + L + C
Sbjct: 148 GFCKAQRVDEAYQLLLDMVEKKSAKPD-IVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + + +QL+ ++ + PN++ +NA++ LC + +++
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM D+ TY + + L K + EV F EM++ P+ + T +
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
A + A ++ ++ GI P + VLL GL G++ F E++L R
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 238 -LIYDVTMQKLKKA 250
++Y ++ KA
Sbjct: 387 AVVYSALVRGCCKA 400
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ EA + F + R +V+ + + L + +++ A + ++ MK +
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ +D L K ++ ++++ M+ G N P+++ Y +V C + +
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN--PSVVTYTTLVHAHCKAGSLQDA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV G PD TY ++ E L +N KV FF ++++ P + + +
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
A + A++ + +L+ + P A+ +L+ L GR
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + +M F + P V+ Y T + L R +VD+ K L M G C
Sbjct: 74 GLCKCGRIENALTLYDDMAIHFGFRPT-VVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGC 132
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L+ S L + M G P LI + ++ LC +++
Sbjct: 133 APNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCP--PELITFGLIIKGLCKEGEIEAA 190
Query: 121 FRFFDQM--VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
FR D+M + G PD +T+N + + L K +++ + N F ++ +P + +T I
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + + A+++ ++E G + + ++ GL +GR+ D +M + L
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310
Query: 239 IYDVTMQKLKKAFYNESR 256
VT L F+ R
Sbjct: 311 PDAVTYNTLIDGFFKRQR 328
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V +A F +MV++ + P+ V+ Y + L + ++V EA + + C
Sbjct: 4 GLCKSRKVDKAITLFKQMVDKAIY-PD-VVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ +D L K + + L+D M I F P ++ Y+ ++ LC +++VD
Sbjct: 62 HPTVVTYNTMIDGLCKCGRIENALTLYDDMA-IHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G P+++TYN + L+ + E + +M N P + I
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 181 LLDADEPEFAIEIWN--YILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLN 234
L E E A + + +++E+G+ P + N +L GL R+ D +R E
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 235 RRILIYDVTMQKLKK 249
++ Y + L K
Sbjct: 241 PNVVTYSTLIDGLSK 255
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA EM+E ++P V+ Y T L R + DEA++ L M C
Sbjct: 322 GFFKRQRLREAVGLLREMLE-AGFHPS-VVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D L K T + ++ M + P++I Y+A++ LC +D
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV-VAPHVIAYSALIDGLCKAGKIDEA 438
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F ++M+ G PD +T++++ L ++ F M + P + AT +
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
L A + A +++ + +G+ P ++ ++ GL + R D +R +E
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + A + EM V+ + + L L + +++ +A + C
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K+ +QL MV +G N + Y+ VV L +++
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR--ANTVTYSTVVDGLLKVGRMEDA 297
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G PD++TYN + + K +++ E EM++ + P+ + T
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-----LNR 235
L + + A+EI +Y+ G P + + ++ GL GR+++ + E+M +
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417
Query: 236 RILIYDVTMQKLKKA 250
++ Y + L KA
Sbjct: 418 HVIAYSALIDGLCKA 432
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V Y T + + +++ EA+ LR M P++ ++ L + V+
Sbjct: 311 PDAV-TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFE 144
+ D M G PN I Y+++V LC V +F++M P + Y+ + +
Sbjct: 370 ILDYMAARG--CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 427
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K K+ E F MI+ P + + I L DA + +E++ + E G +P
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVP 487
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
LC + VD F QMV +PD +TY + + L K ++V E + F E PT
Sbjct: 5 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 64
Query: 171 PLNCATAITMLLDADEPEFAIEIW-NYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ T I L E A+ ++ + + G P + + L+ GL + +
Sbjct: 65 VVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
EEM R VT L A + RS ++ F LE+
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRS-KEAFSLLEQ 161
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 7/258 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW +E N++ ++ + EM E FE P+ V Y + + ++ D A++ M+
Sbjct: 258 GWGQEQNLLRLDEVYREMKDEGFE--PDAV-TYGILINAHCKARRYDAAVELFHKMEANK 314
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C PT + ++ L T +Q ++ GF P YNAVVG C + +D+
Sbjct: 315 CMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFT--PEAPTYNAVVGSYCQSMRMDD 372
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAI 178
+R D+M G P + TY++I LIK ++ E F M +P+ +
Sbjct: 373 AYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVV 432
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
M + + + A+ +W+ + G+LP + L+ L +L + ++ EML+ I
Sbjct: 433 RMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIR 492
Query: 239 IYDVTMQKLKKAFYNESR 256
LK+ +E +
Sbjct: 493 PPAAMFSNLKQTLLDEGK 510
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 15/232 (6%)
Query: 29 VLAYETFLIT---LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+L ETF + R ++V EA++ M+ P L F+ LD L K +
Sbjct: 176 LLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQE 235
Query: 86 LWDIMVGIGFNLMPNLIMYNAVV---GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++D M F P++ Y ++ G N +D V+R +M G PD++TY ++
Sbjct: 236 VFDKMKDRKFR--PDIKSYTILLEGWGQEQNLLRLDEVYR---EMKDEGFEPDAVTYGIL 290
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K ++ FH+M N+ PTP T I L A++ + +G
Sbjct: 291 INAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGF 350
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
P + N ++ R+ D R +EM + + YD+ + L KA
Sbjct: 351 TPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKA 402
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+ +A + + EM++ P+ V Y + L + +VDEA++ ++ M NC
Sbjct: 168 GWGRAPNLPKAREIYREMIDS-GCIPDEV-TYSIMVDVLCKAGRVDEAVEIVKEMDYNNC 225
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ +S + N V + M G +M ++ YNA++ C N + NV
Sbjct: 226 KPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNG--VMADVAAYNALISAFCKANKMKNV 283
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R M G P+S T N+I LI + E F MIK +P + I M
Sbjct: 284 YRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKM 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E + A++IW Y+ + +P + +VL+ GL +G + EEM+ + I
Sbjct: 343 FCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPS 402
Query: 241 DVTMQKLKKAFYNESR 256
T +L+ E R
Sbjct: 403 GATFGRLRHLLIKEGR 418
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 94/251 (37%), Gaps = 43/251 (17%)
Query: 22 FEWNPEH------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
FEW + V AY + + +L + +Q + M+ + ++ F +
Sbjct: 43 FEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEIL-NVEAFCIIMRKYA 101
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD---------- 125
+ V +++M +N+ PN+ +N ++ LC + +V FD
Sbjct: 102 RAQKVEEAVYTFNVMEK--YNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDS 159
Query: 126 ------------------------QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+M+ G PD +TY+++ + L K +V E E
Sbjct: 160 KTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKE 219
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M N +P+ + + + E A+ + + NG++ A+ N L+ +
Sbjct: 220 MDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANK 279
Query: 222 LSDVRRFAEEM 232
+ +V R ++M
Sbjct: 280 MKNVYRVLKDM 290
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 17/238 (7%)
Query: 1 GWEKEGNVVEANKTFGEMV---ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
G+ + G + +A + M + F +NP +RG+ + +AL M
Sbjct: 228 GYCRAGRIEDARRLINGMPFPPDTFTFNP-------LIRALCVRGR-IPDALAVFDDMLH 279
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P++ +S LD K + + L D M G P+++ YN ++ +CN DV
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCE--PDIVTYNVLINAMCNEGDV 337
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + HG PD++TY + + L +++ EVE EM N P + T
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+T L + AIE+ +++ E+G + + + +L GL ++GR+ D A E+L+R
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD----AVELLSR 451
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 5/234 (2%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
++ + P+ +AY T L L +Q + A + + M +C P F+ + L +
Sbjct: 452 LKSYGCKPD-TIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+++ + M G + P+++ YN ++ LCN + +D+ + G PD +T
Sbjct: 511 LVDRAIRVVEQMSENGCS--PDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
+N + + L + + E M+++ P L T IT L AIE +
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--ILIYDVTMQKLKKA 250
ENG +P ++ ++++ L G+ M N ++ Y+ + L KA
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKA 682
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 4/213 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P L + T + +L + + +A++ L++M C P +S +D L+K + ++
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L M N P+LI YN V+ L ++ MV +G PD+ TY +
Sbjct: 658 LLSGMT----NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYG 713
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + + P + + AI+ + +++ +G +P
Sbjct: 714 VCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPD 773
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
E++ +LL L G L + +R + + +L
Sbjct: 774 ESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 4/252 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG+V EA + P+ V Y L +L ++ E + L M NC P
Sbjct: 334 EGDVDEALNILSNL-PSHGCKPDAV-TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + L + +++ D M G + +++ Y++++ LC+ VD+
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSEHG--CVADIVTYSSILDGLCDVGRVDDAVELL 449
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++ +G PD++ Y + + L ++ E EM+ ++ P + T + L
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ AI + + ENG P + N ++ GL N + D ++ + VT
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569
Query: 245 QKLKKAFYNESR 256
L K R
Sbjct: 570 NTLLKGLCGVDR 581
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 3/208 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V + T + +L + VD A++ + M C + +S+ LD L + V+
Sbjct: 389 PDEV-TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + G P+ I Y V+ LC+ + +M+ PD +T+N +
Sbjct: 448 LLSRLKSYGCK--PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + V +M +N P + I L + + A+E+ + + G P
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
+ N LL GL + R D + M+
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 16/252 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G V A + +M E +P+ ++ Y + L +D+A++ L ++ C P
Sbjct: 508 QKGLVDRAIRVVEQMSENG-CSPD-IVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ L L ++ QL M + N P+ + +N V+ LC +
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANM--MRSNCPPDELTFNTVITSLCQKGLLTQAIET 623
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M +G P+S TY+++ + L+K K M P + T I+ L
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTK 681
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILIYDV 242
A + E A+++ ++ NG+ P + L G+ R G VR ML R + D
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVR-----MLRR---VQDT 733
Query: 243 TMQKLKKAFYNE 254
+ FYN+
Sbjct: 734 GLSP-DTTFYND 744
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 31/249 (12%)
Query: 36 LITLIRGKQVDEALKFLRVMK---GENCFPTLKF------------FSNALDILVKLNDS 80
L +L++ ++DEAL M G NC P + S+A + L S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216
Query: 81 THTVQLWDIMVGI---------------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
TV ++ MV G P+ +N ++ LC + + FD
Sbjct: 217 A-TVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFD 275
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ G P +TY+++ + K + EM +P + I + +
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ + A+ I + + +G P + +L L R +V EM + +VT
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395
Query: 246 KLKKAFYNE 254
+ + +
Sbjct: 396 TIVTSLCQQ 404
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A TF EM + NP+ V Y T + L + ++VDEA+ L M+ E C P
Sbjct: 186 KLGQIDRAVDTFREMPLK-NCNPD-VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 243
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ +D L K D + +L D M G +PN + YN ++ LC +D
Sbjct: 244 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLDKALSL 301
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV P+ +TY I L+K ++ + + M + + ++ I+ L
Sbjct: 302 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK 361
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+ +W + E G P + GL + + +EML++ L T
Sbjct: 362 EGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFT 421
Query: 244 MQKLKKAFYNESRSMR 259
L K F+ + S +
Sbjct: 422 YSSLMKGFFKKGDSQK 437
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
FG + F+ N +L Y + L + Q+D A+ R M +NC P + +S ++ L
Sbjct: 163 FGANSKGFQPN---LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 219
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K V L D M G +PN + +N ++ L N D+ + D M G P
Sbjct: 220 CKERRVDEAVFLLDEMQAEG--CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP 277
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ +TYN + L K+ + + +M+ ++ P + T I L+ E + I
Sbjct: 278 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 337
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ E G E + L+ GL G+ + R +EM +
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEK 378
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 6/215 (2%)
Query: 47 EALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI---GFNLMPNLI 102
EA+ F M + +C T+K F++ L+++++ D ++ + + + G GF PNL+
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ--PNLL 175
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN ++ LC +D F +M PD TY+ + L K ++V E EM
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P P+ I L + A ++ + + G +P E + N L+ GL G+L
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 295
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
E+M++ + + VT + + R+
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 330
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ ++ ++ + L M+ +S+ + L K S + V+LW
Sbjct: 315 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 374
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G PN+++Y A + LC + D +M+ G P++ TY+ + + K
Sbjct: 375 MAEKGCK--PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 432
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + EM+ + + + C+ + L ++ A+ +W ++L G+ P +
Sbjct: 433 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 492
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
+ ++ GL ++G + + EM
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEM 515
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 7/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG A + + EM E+ +V+ Y F+ L R ++ DEA L+ M +
Sbjct: 358 GLFKEGKSENAVRLWKEMAEK--GCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 415
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + K DS + +W M + ++ N++ + ++ LC + +
Sbjct: 416 LPNAFTYSSLMKGFFKKGDSQKAILVWKEM--MSQDMRHNVVCCSVLLNGLCESGRLREA 473
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ M+ G PD + Y+ + + L V + F+EM E + P +
Sbjct: 474 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 533
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNR 235
L D AI++ N +L+ G P + N+ L LR + D R F +E++ R
Sbjct: 534 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 591
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L ++D+AL L M C P + ++ LVK + V +
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G N +Y++++ L +N R + +M G P+ + Y + L ++
Sbjct: 340 MEERGQK--ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+K E E+ EM+ + P ++ + + + AI +W ++ +
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 457
Query: 210 NVLLVGLRNLGRLSDV 225
+VLL GL GRL +
Sbjct: 458 SVLLNGLCESGRLREA 473
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A TF EM + NP+ V Y T + L + ++VDEA+ L M+ E C P
Sbjct: 210 KLGQIDRAVDTFREMPLK-NCNPD-VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 267
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ +D L K D + +L D M G +PN + YN ++ LC +D
Sbjct: 268 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLDKALSL 325
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV P+ +TY I L+K ++ + + M + + ++ I+ L
Sbjct: 326 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK 385
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+ +W + E G P + GL + + +EML++ L T
Sbjct: 386 EGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFT 445
Query: 244 MQKLKKAFYNESRSMR 259
L K F+ + S +
Sbjct: 446 YSSLMKGFFKKGDSQK 461
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
FG + F+ N +L Y + L + Q+D A+ R M +NC P + +S ++ L
Sbjct: 187 FGANSKGFQPN---LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 243
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K V L D M G +PN + +N ++ L N D+ + D M G P
Sbjct: 244 CKERRVDEAVFLLDEMQAEG--CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP 301
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ +TYN + L K+ + + +M+ ++ P + T I L+ E + I
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 361
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ E G E + L+ GL G+ + R +EM +
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEK 402
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 6/215 (2%)
Query: 47 EALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI---GFNLMPNLI 102
EA+ F M + +C T+K F++ L+++++ D ++ + + + G GF PNL+
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ--PNLL 199
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN ++ LC +D F +M PD TY+ + L K ++V E EM
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P P+ I L + A ++ + + G +P E + N L+ GL G+L
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 319
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
E+M++ + + VT + + R+
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 354
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ ++ ++ + L M+ +S+ + L K S + V+LW
Sbjct: 339 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 398
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G PN+++Y A + LC + D +M+ G P++ TY+ + + K
Sbjct: 399 MAEKGCK--PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + EM+ + + + C+ + L ++ A+ +W ++L G+ P +
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
+ ++ GL ++G + + EM
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEM 539
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 7/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG A + + EM E+ +V+ Y F+ L R ++ DEA L+ M +
Sbjct: 382 GLFKEGKSENAVRLWKEMAEK--GCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 439
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + K DS + +W M+ ++ N++ + ++ LC + +
Sbjct: 440 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ--DMRHNVVCCSVLLNGLCESGRLREA 497
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ M+ G PD + Y+ + + L V + F+EM E + P +
Sbjct: 498 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 557
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNR 235
L D AI++ N +L+ G P + N+ L LR + D R F +E++ R
Sbjct: 558 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 615
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L ++D+AL L M C P + ++ LVK + V +
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G N +Y++++ L +N R + +M G P+ + Y + L ++
Sbjct: 364 MEERGQK--ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+K E E+ EM+ + P ++ + + + AI +W ++ +
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 481
Query: 210 NVLLVGLRNLGRLSDV 225
+VLL GL GRL +
Sbjct: 482 SVLLNGLCESGRLREA 497
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KE + A + G+M R + P+ ++ Y T L L + +VD A++ L + + C
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCY-PD-IVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L K+ + +L D M G L P++I Y+++VG L VD
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG--LKPDIITYSSLVGGLSREGKVDEA 348
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF + G P+++TYN I L K +K +F M++ +PT + I
Sbjct: 349 IKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEG 408
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANV 211
L + A+E+ N + G++ ++ V
Sbjct: 409 LAYEGLAKEALELLNELCLRGVVKKSSAEKV 439
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P+H L+Y L + K+++ A+++L M C+P + ++
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V+L + + G + P LI YN V+ L D + D+M
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCS--PVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ +P + + L A + +
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y+++ G P EAS +L+ GL G + E+ R ++
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 6/223 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+LIRG + +A + + +++ P + ++ + + +L MV
Sbjct: 124 SLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRR 183
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + P+++ +N ++ LC + ++M HG P+SL+YN + K KK+
Sbjct: 184 GCS--PSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKME 241
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ +M P + T +T L + + A+E+ N + G P+ + N ++
Sbjct: 242 RAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVI 301
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GL +G+ + +EM + + +T L E +
Sbjct: 302 DGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V EA + FG+M E+ + P+ +AY T + L + EALK L M + C PT
Sbjct: 237 KAKRVKEAREVFGQM-EKCGFPPD-AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L K +L+ +M GF PN ++Y +++ + +
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFR--PNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G PD +T+ ++ + L K+ + F EM++ +P + T I L
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A I ++ +G P + LL G LGRL + + +E+
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 5/219 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A K E R WN + V+AY L QVD A+ + M +
Sbjct: 587 GLCKIGEVDRAVKMLEEASSR-GWNAD-VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+K + +D M+G G P + Y A+V LC+ +VD
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK--PTVATYTALVQALCHAGNVDEA 702
Query: 121 FRFFDQMVFHGAFPDS-LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F F+ M+ G S + Y+ + K KV F +MI PT + A+
Sbjct: 703 FHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD 762
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
L+ + + E A E+ + G P A+ +L GLR
Sbjct: 763 GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 21/276 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ--VDEALKFLRVMKGE 58
G K G + EA + F MV E Y + L R ++ V+ A L ++
Sbjct: 515 GLCKTGRLDEACRIFQRMVS--EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV 572
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ L K+ + V++ + G+N +++ Y A+ LC VD
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN--ADVVAYTALCTGLCYQGQVD 630
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +MV G PD+ Y I LIK KK+ + FF EMI +PT +
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L A + A + +L G L + L+ G ++ + E+M++R
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ VT L FD L R KT +
Sbjct: 751 VPTAVTSASL--------------FDGLVRSGKTEK 772
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 3/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G +A + F EM+ P+ L + + TL++ K+V EA + M+ P
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRAL-HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K + +++ D M+ +P + Y +V LC ++
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKA--CVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M G P+S+ Y + K+ ++ E + F EM++ ++P + I L
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A + + ++ G P + ++ GL +GR+++ R + M+ VT
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 244 MQKLKKAFYNESR 256
L F R
Sbjct: 438 YICLLDGFCKLGR 450
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 123/327 (37%), Gaps = 81/327 (24%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN +A K+F EM+ R P +V+ Y T + L + +V A + ++ M C
Sbjct: 374 GLCKSGNFEQAAKSFEEMM-RGGCKP-NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGC 431
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + LD KL QL D + + PNL +Y+++V LC+ V+N
Sbjct: 432 FPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS--PNLQLYSSLVKGLCDGGSVENT 489
Query: 121 F------------------------------------RFFDQMVFHGAFPDSLTYNMIFE 144
R F +MV G PD+ TYN++
Sbjct: 490 LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 145 CLIKNK--KVHEVENFFHEMIKNEWQP-----TPLNCA--------TAITMLLDAD---- 185
L +++ +V H++ + P TPL A+ ML +A
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 186 ------------------EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
+ + A+ ++ ++ G P A+ ++ GL +L D +
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK 669
Query: 228 FAEEMLNR----RILIYDVTMQKLKKA 250
F +EM+ + + Y +Q L A
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHA 696
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 96/271 (35%), Gaps = 42/271 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ EA K M+ + E + Y + +L + ++ A + RVM
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTE--VTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P +++ + K L+D MV G+
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
PN++ Y ++ L V N FR M+ HG FPDS+TY + +
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENGIL 203
K ++ E E+ K P ++ + L D E + E EN
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP 506
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L S ++VGL GRL + R + M++
Sbjct: 507 GLCCS---IIVGLCKTGRLDEACRIFQRMVS 534
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Query: 25 NPEHVLAYETFLITLIRG-KQVDEALKFLRVMKGENCFPTLKFFSNAL-DILVKLNDSTH 82
P H + + ++R K A+ F R + F F N L ++LV + +
Sbjct: 78 GPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQ 137
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ + M+ G + PN +N ++ D+ F+ M PD T+ ++
Sbjct: 138 CYAIHEEMLKAG--IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA-ITMLLDADEPEFAIEIWNYILENG 201
+CL K + FHEM+ + P TA + LL A + A E++ + + G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
P + N ++ GL G + + + ML + + +VT
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V EA + FG+M E+ + P+ +AY T + L + EALK L M + C PT
Sbjct: 237 KAKRVKEAREVFGQM-EKCGFPPD-AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L K +L+ +M GF PN ++Y +++ + +
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFR--PNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G PD +T+ ++ + L K+ + F EM++ +P + T I L
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A I ++ +G P + LL G LGRL + + +E+
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 5/219 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A K E R WN + V+AY L QVD A+ + M +
Sbjct: 587 GLCKIGEVDRAVKMLEEASSR-GWNAD-VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+K+ + +D M+G G P + Y A+V LC+ +VD
Sbjct: 645 APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQK--PTVATYTALVQALCHAGNVDEA 702
Query: 121 FRFFDQMVFHGAFPDS-LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F F+ M+ G S + Y+ + K KV F +MI PT + A+
Sbjct: 703 FHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD 762
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
L+ + + E A E+ + G P A+ +L GLR
Sbjct: 763 GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 21/276 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ--VDEALKFLRVMKGE 58
G K G + EA + F MV E Y + L R ++ V+ A L ++
Sbjct: 515 GLCKTGRLDEACRIFQRMVS--EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ L K+ + V++ + G+N +++ Y A+ LC VD
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN--ADVVAYTALCTGLCYQGQVD 630
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +MV G PD+ Y I LIK KK+ + FF EMI +PT +
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L A + A + +L G L + L+ G ++ + E+M++R
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 238 LIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ VT L FD L R KT +
Sbjct: 751 VPTAVTSASL--------------FDGLVRSGKTEK 772
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 3/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G +A + F EM+ P+ L + + TL++ K+V EA + M+ P
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRAL-HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K + +++ D M+ +P + Y +V LC ++
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKA--CVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M G P+S+ Y + K+ ++ E + F EM++ ++P + I L
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A + + ++ G P + ++ GL +GR+++ R + M+ VT
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 244 MQKLKKAFYNESR 256
L F R
Sbjct: 438 YICLLDGFCKLGR 450
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 95/271 (35%), Gaps = 42/271 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ EA K M+ + E + Y + +L + ++ A + RVM
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTE--VTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P +++ + K L+D MV G+
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
PN++ Y ++ L V N FR M+ HG FPDS+TY + +
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE- 206
K ++ E E+ K P ++ + L D E + + + E E
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE---KTLDDLFEQSKAAAET 503
Query: 207 ---ASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++VGL GRL + R + M++
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 124/361 (34%), Gaps = 114/361 (31%)
Query: 1 GWEKEGNVVEANKTFGEMVE----------------------------------RFEWNP 26
G+ K G + EA F EMVE R P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+V+ Y T + L + +V A + ++ M CFP + LD KL QL
Sbjct: 399 -NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV----------------------------- 117
D + + PNL +Y+++V LC+ V
Sbjct: 458 LDELDKCSSS--PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG 515
Query: 118 -------DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK--KVHEVENFFHEMIKNEWQ 168
D R F +MV G PD+ TYN++ L +++ +V H++ K +
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYL 575
Query: 169 P-----TPLNCA--------TAITMLLDAD----------------------EPEFAIEI 193
P TPL A+ ML +A + + A+ +
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
+ ++ G P A+ ++ GL + +L D +F +EM+ + + Y +Q L
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695
Query: 250 A 250
A
Sbjct: 696 A 696
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Query: 25 NPEHVLAYETFLITLIRG-KQVDEALKFLRVMKGENCFPTLKFFSNAL-DILVKLNDSTH 82
P H + + ++R K A+ F R + F F N L ++LV + +
Sbjct: 78 GPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQ 137
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ + M+ G + PN +N ++ D+ F+ M PD T+ ++
Sbjct: 138 CYAIHEEMLKAG--IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA-ITMLLDADEPEFAIEIWNYILENG 201
+CL K + FHEM+ + P TA + LL A + A E++ + + G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
P + N ++ GL G + + + ML + + +VT
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+EA FG+M++ P+ ++ Y + + + + E+ L M N P
Sbjct: 326 KEGVVLEALSVFGKMIQ-IAMEPD-IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D+ K + + ++M+ G L PN++ YN+++ C ++ +D +
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERG--LRPNVVTYNSLMDGYCLHSQMDEARKV 441
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV G PD L+YN++ + K++++ E + F EM P + T I+ L
Sbjct: 442 FDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQ 501
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A P A E++ + +G P + + LL G G L + E +
Sbjct: 502 AGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V EA M+ER P +V+ Y + + Q+DEA K +M + C P
Sbjct: 396 KKGMVSEAQSIINLMIER-GLRP-NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K QL+D M G L PN I + ++ LC
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKG--LTPNSITHTTLISGLCQAGRPYAAKEL 511
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M HG PD +TY+ + K+ + E F + K++ +P + C + +
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571
Query: 184 ADEPEFAIEIWN 195
A + E A E+++
Sbjct: 572 AGKLEDAKELFS 583
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 114/273 (41%), Gaps = 6/273 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A +MVE + PE V++Y + +L + + V+EA+ M+
Sbjct: 218 GLCKIGKTSAAIVWMKKMVE-LDCEPE-VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGI 275
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ + + L+ M + +N+ P+++ ++ +V LC V
Sbjct: 276 SPTVVTYNSLIYGMCNSGQWKQASILFKEM--LEWNMKPDVVTFSILVDALCKEGVVLEA 333
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ PD +TY+ + + K+ E +EM+ +P + + + +
Sbjct: 334 LSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A I N ++E G+ P + N L+ G ++ + R+ + M+N+
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 241 DVTMQKLKKAFYNESR--SMRDRFDSLERRWKT 271
++ L K + R + FD + + T
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM--------------- 90
D+AL + M N FP + F+ L LV++ V ++ M
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 91 ---------VGIGFNLM---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
VG+GF+++ P++I +N ++ LC + D ++ G
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
P T+ MI L K K + +M++ + +P ++ + I L A++
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ ++ GI P + N L+ G+ N G+ +EML
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 97/228 (42%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + + Q +A + M N P + FS +D L K + ++
Sbjct: 279 VVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFG 338
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ I P+++ Y++++ +C ++ ++M+ PD +T+++ + K
Sbjct: 339 KMIQIAME--PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK 396
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V E ++ + MI+ +P + + + + + A ++++ ++ G P S
Sbjct: 397 KGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N+L+ G R+ + ++ +EM ++ + +T L R
Sbjct: 457 YNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 15/239 (6%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + T + L ++ EA++ L + PT+ + ++ L K+ ++ +
Sbjct: 174 IITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMK 233
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV + + P ++ Y+ ++ LC N V+ F M G P +TYN + +
Sbjct: 234 KMVEL--DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILP 204
+ + + F EM+ EW P ++L+DA E A+ ++ +++ + P
Sbjct: 292 SGQWKQASILFKEML--EWNMKPD--VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK-----LKKAFYNESRSM 258
+ + L+ G+ + EML+R I VT KK +E++S+
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 16/187 (8%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
FSN D L N H N P + +N ++ L D+V + +
Sbjct: 82 FSNFDDALAYFNQMVH------------MNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M F G T ++ CL V + ++ K ++P+ + T I L
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRRILIYDV 242
A+E +YI+ G P + +++ GL +G+ S +++ E ++ Y +
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 243 TMQKLKK 249
+ L K
Sbjct: 250 IIDSLCK 256
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
GK+V EA KFL M E P + +S LD L+K+ + ++L+ + G+ P+
Sbjct: 442 HGKEV-EACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY--CPD 498
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+I YN ++ LC + +M G P ++TYN + + L K + E F
Sbjct: 499 VIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLS 558
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
MI+ E +P + +T I L +A P+ A+ +WN + G P + + GL N G
Sbjct: 559 MMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCG 618
Query: 221 RLSDVRRFAEEMLNRRI 237
R ++ + EM R +
Sbjct: 619 RPNEALVYLREMEEREM 635
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 54/284 (19%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF------------- 61
F EM E + +L Y + L +L+ V +A L+ + NC
Sbjct: 260 FEEMHEDMDPKASTLL-YNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKA 318
Query: 62 ---PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P FS ++ L+K D V L+ M IG P+L++YN ++ LC +N +
Sbjct: 319 MVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCK--PDLLLYNNLIDGLCTSNRLQ 376
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFEC------------LIKNKKVH------------- 153
+M G P S T N IF C L+K ++H
Sbjct: 377 ESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLV 436
Query: 154 --------EVE--NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
EVE F +M + +QP + + + L+ E + A++++ I G
Sbjct: 437 KELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYC 496
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
P + N+L+ GL R+++ + EM + ++ VT L
Sbjct: 497 PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTL 540
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V +A K F ++ + + P+ V+AY + L + +++ EA L M+ +
Sbjct: 473 GLIKIQEVDQALKLFQDICAQ-GYCPD-VIAYNILIKGLCKTQRIAEAQNLLHEMEEKGL 530
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ +D L K + + +M I PN+I Y+ ++ LCN D+
Sbjct: 531 VPSAVTYNTLIDGLCKTDHLEEAMLFLSMM--IEKEREPNVITYSTLINGLCNAGRPDDA 588
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP-TPLNCATAIT 179
+++M G P S+ Y L + +E + EM + E +P T +
Sbjct: 589 LVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNA 648
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
L+D+++P A EI +++ G P
Sbjct: 649 FLVDSNQP-LAFEILQEMVDKGKFP 672
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F E+ +R W E+V + ++ + +VD+A + + M+ +N K F +
Sbjct: 119 KALDVFNEIHDR-GWVDEYV--FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCS 175
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ VK + + L+D M GF P++ +Y+ ++G LC N DV + +M
Sbjct: 176 LIYGFVKESRVDKALHLFDKMKKSGFT--PDISLYDVIIGGLCVNKDVKKALCLYSEMKG 233
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
PD ++ + + K E+ FF EM
Sbjct: 234 FKIQPD---VKIVTKLISSFSKEEELTCFFEEM 263
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P H L+Y L + K++D A+++L +M C+P + ++
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V+L + + G + P LI YN V+ L D +M
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCS--PVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ +P + + L A + +
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y++ G P E S +L+ G+ N G + E+ +R ++
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KE + A + MV R + P+ ++ Y T L L + +VD A++ L + + C
Sbjct: 165 GFCKEKKMDRAIQYLEIMVSRGCY-PD-IVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L K+ + V+L M G G L P++I Y++++ L V+
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG--LKPDVITYSSLIAGLSREGKVEEA 280
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF + G P++ TYN I L K ++ +F MI +PT ++ I
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ + + A+E+ N + G++ ++ V++
Sbjct: 341 IANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 4/252 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E V +A K EM R P+ V+ Y + + + ++DEA+KFL M P +
Sbjct: 29 ESGVGQAMKLLDEMGSR-GCKPD-VVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNV 86
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ L + +L MV G + P+++ +N ++ LC +
Sbjct: 87 ITHNIILRSMCSTGRWMDAEKLLTEMVRKGCS--PSVVTFNILINFLCRKGLLGRAIDIL 144
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 145 EKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKD 204
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+E+ N + G P+ + N ++ GL +G+ EM + + +T
Sbjct: 205 GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITY 264
Query: 245 QKLKKAFYNESR 256
L E +
Sbjct: 265 SSLIAGLSREGK 276
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I Y ++ C + V + D+M G PD +TYN++ + K ++ E F
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 159 FHEMIKNEWQP 169
+ M QP
Sbjct: 74 LNSMPSYGSQP 84
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL---KFLRVMKG 57
GW + N K EMVE P++ AY T + T + V EA+ +F+R
Sbjct: 175 GWCRVRNPTRGMKLLEEMVE-LGHRPDN-FAYNTAIDTYCKAGMVTEAVDLFEFMRTKGS 232
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K ++ + L + + +L M+ G +P++ Y ++ +C +
Sbjct: 233 SISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSG--CLPDVTTYKEIIEGMCVCGKI 290
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++F ++M PD +TYN + L NKK + + MI+ P+
Sbjct: 291 DEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNML 350
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + D+P+ A E W + G P + +V++ GL N ++ D EE++N+ I
Sbjct: 351 ISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGI 410
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L +A + S MR ++ + RR+ SQ
Sbjct: 411 KLPYKKFDSFLMQLSVIGDLQAIHRVSEHMRKFYNHGMARRYALSQ 456
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F+ LD L K L+ M + PN YN V C +
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKMRK---TVKPNAETYNIFVFGWCRVRNPTRGM 186
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW----QPTPLNCATA 177
+ ++MV G PD+ YN + K V E + F E ++ + PT A
Sbjct: 187 KLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLF-EFMRTKGSSISSPTAKTYAII 245
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L D E ++ +++ +G LP + ++ G+ G++ + +F EEM N+
Sbjct: 246 IVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNK 303
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 6/257 (2%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G V A + F EM +++ E + V Y T + L + ++DEA+ L M+ E CFP
Sbjct: 184 KLGLVDRAIEVFREMAIQKCEPD---VFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 240
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ F+ ++ L K D +L D M G +PN + YN ++ LC +D
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG--CVPNEVTYNTIINGLCLKGKLDKAVS 298
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
D+MV P+ +TY + L+K + + + + + +T I+ L
Sbjct: 299 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLF 358
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
++ E A+ +W ++E G P + L+ GL G+L + + EM+N+
Sbjct: 359 KEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAF 418
Query: 243 TMQKLKKAFYNESRSMR 259
T L K F+ S +
Sbjct: 419 TYSSLIKGFFKTGNSQK 435
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA + +MVE+ P +++ Y + L R ++DEA + L M + C
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEK-GCQP-NIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + K +S +++W M N +PN I Y+ ++ LC + +
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA--KNNCVPNEICYSVLIHGLCEDGKLREA 471
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI--KNEWQPTPLNCATAI 178
+ M+ G PD + Y+ + L V F+EM+ +++ QP + +
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 531
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNR 235
L + AI++ N +L+ G P + N+ L LR L D R F +E++ R
Sbjct: 532 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR 589
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 2/220 (0%)
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
F R++ C T++ F++ L+++++ ++ ++ VG N+ PN++ +N V+
Sbjct: 122 FGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKA 181
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+C VD F +M PD TY + + L K ++ E EM P+
Sbjct: 182 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPS 241
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
+ I L + ++ + + G +P E + N ++ GL G+L +
Sbjct: 242 SVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLD 301
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESRSMRD--RFDSLERR 268
M+ + + DVT L + RS+ SLE R
Sbjct: 302 RMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 10/227 (4%)
Query: 30 LAYETFLITLIR-GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L++ G+ VD + L ++ +S + L K S + LW
Sbjct: 313 VTYGTLINGLVKQGRSVD-GVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 371
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G PN+++Y+A++ LC +D +MV G P++ TY+ + + K
Sbjct: 372 KMVEKG--CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 429
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + EM KN P + + I L + + A+ +W ++L G+ P +
Sbjct: 430 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 489
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR------ILIYDVTMQKLKK 249
+ ++ GL N G + + EML + ++ Y++ ++ L K
Sbjct: 490 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 536
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 5/250 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG--ENCFPTLKFF 67
+A + FG MV+ F+ V ++ + L +I+ AL+F G N P + F
Sbjct: 117 KAIELFGRMVDEFQCR-RTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + + KL ++++ M P++ Y ++ LC + +D D+M
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQ--KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G FP S+T+N++ L K + V M P + T I L +
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ A+ + + ++ + +P + + L+ GL GR D + R + L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353
Query: 248 KKAFYNESRS 257
+ E +S
Sbjct: 354 ISGLFKEEKS 363
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW +E N++ ++ EM E FE P+ V+AY + + K+ +EA++F M+ N
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFE--PD-VVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 60 CFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
C P+ F N L KLND+ ++ ++ GF L YNA+VG C +
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDA---LEFFERSKSSGFPL--EAPTYNALVGAYCWSQR 352
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+++ ++ D+M G P++ TY++I LI+ ++ E + M +PT
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEI 409
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ M + + + AI+IW+ + G+LP + L+ L + +L + + EML+
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 237 ILIYDVTMQKLKKAFYNESR 256
I +LK+ +E R
Sbjct: 470 IRPPGHMFSRLKQTLLDEGR 489
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 6/257 (2%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G V A + F EM +++ E + V Y T + L + ++DEA+ L M+ E CFP
Sbjct: 200 KLGLVDRAIEVFREMAIQKCEPD---VFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 256
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ F+ ++ L K D +L D M G +PN + YN ++ LC +D
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG--CVPNEVTYNTIINGLCLKGKLDKAVS 314
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
D+MV P+ +TY + L+K + + + + + +T I+ L
Sbjct: 315 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLF 374
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
++ E A+ +W ++E G P + L+ GL G+L + + EM+N+
Sbjct: 375 KEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAF 434
Query: 243 TMQKLKKAFYNESRSMR 259
T L K F+ S +
Sbjct: 435 TYSSLIKGFFKTGNSQK 451
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA + +MVE+ P +++ Y + L R ++DEA + L M + C
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEK-GCQP-NIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + K +S +++W M N +PN I Y+ ++ LC + +
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA--KNNCVPNEICYSVLIHGLCEDGKLREA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI--KNEWQPTPLNCATAI 178
+ M+ G PD + Y+ + L V F+EM+ +++ QP + +
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 547
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNR-- 235
L + AI++ N +L+ G P + N+ L LR L D R F +E++ R
Sbjct: 548 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLH 607
Query: 236 ---RIL----IYDVTMQK 246
RI+ I +V +QK
Sbjct: 608 KRQRIVGAAKIIEVMLQK 625
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 2/220 (0%)
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
F R++ C T++ F++ L+++++ ++ ++ VG N+ PN++ +N V+
Sbjct: 138 FGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKA 197
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+C VD F +M PD TY + + L K ++ E EM P+
Sbjct: 198 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPS 257
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
+ I L + ++ + + G +P E + N ++ GL G+L +
Sbjct: 258 SVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLD 317
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESRSMRD--RFDSLERR 268
M+ + + DVT L + RS+ SLE R
Sbjct: 318 RMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 10/227 (4%)
Query: 30 LAYETFLITLIR-GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L++ G+ VD + L ++ +S + L K S + LW
Sbjct: 329 VTYGTLINGLVKQGRSVD-GVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 387
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G PN+++Y+A++ LC +D +MV G P++ TY+ + + K
Sbjct: 388 KMVEKG--CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFK 445
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + EM KN P + + I L + + A+ +W ++L G+ P +
Sbjct: 446 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 505
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR------ILIYDVTMQKLKK 249
+ ++ GL N G + + EML + ++ Y++ ++ L K
Sbjct: 506 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 552
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 5/250 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG--ENCFPTLKFF 67
+A + FG MV+ F+ V ++ + L +I+ AL+F G N P + F
Sbjct: 133 KAIELFGRMVDEFQCR-RTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + + KL ++++ M P++ Y ++ LC + +D D+M
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQ--KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G FP S+T+N++ L K + V M P + T I L +
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ A+ + + ++ + +P + + L+ GL GR D + R + L
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369
Query: 248 KKAFYNESRS 257
+ E +S
Sbjct: 370 ISGLFKEEKS 379
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P+H L+Y L L + K+++ A+++L +M C+P + ++
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L D+ + D+M
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCS--PVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ + +P + + + L A +
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVR 545
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
AI+ Y++ G P E S +L+ GL G + E+ +R ++ Q + K
Sbjct: 546 AIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605
Query: 250 AFYN 253
+N
Sbjct: 606 IPFN 609
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V +A K EM ++ P+ V+ Y + + + ++DEA++FL M C P
Sbjct: 259 KESGVGQAMKLLDEMRDK-GCKPD-VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN 316
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + + M+ G + P+++ +N ++ LC +
Sbjct: 317 VITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS--PSVVTFNILINFLCRKGLIGRAIDV 374
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + L K+KK+ + M+ P + T +T L
Sbjct: 375 LEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCK 434
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+EI N + G P+ + N ++ GL +G+ D + +EM + + +T
Sbjct: 435 DGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIIT 494
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 495 YSTLVGGLSREGK 507
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 100/232 (43%), Gaps = 7/232 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + E K +MV R + P+ ++A + + L + + +A + + +++ P
Sbjct: 122 RNGELEEGFKFLEDMVCRGDI-PD-IIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K + +QL D M ++ P+++ YN ++ LC++ +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM-----SVSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+ + +PD +TY ++ E K V + EM +P + I +
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ AI N++ G P + N++L + + GR D +F EM+ +
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L+R +++E KFL M P + ++ + L K + ++ +I+ G +
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSG--AV 177
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I YN ++ C ++ + + D+M PD +TYN I L + K+ E
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILPLEASANVLLV 214
++ E P + T+L++A E A+++ + + + G P + NVL+
Sbjct: 235 LDRQMQRECYPDVI----TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290
Query: 215 GLRNLGRLSDVRRFAEEM 232
G+ GRL + RF M
Sbjct: 291 GICKEGRLDEAIRFLNHM 308
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+V+ A F E + R P V+++ T + R K V+E VM+ E
Sbjct: 235 GFCKIGDVMNARMVFDE-ISRRGLRPS-VVSFNTLISGYCRSKNVEEGFVLKSVMESERI 292
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L K + L+D M +G L+PN + + ++ C + +D
Sbjct: 293 SPDVFTYSALINGLCKESRVEEANGLFDEMCEMG--LVPNGVTFTTLIDGQCKHGKIDLA 350
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F+ M G PD +TYN + L ++ + E +EMI N ++P + T +
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A+EI + ++E GI + + L+ GL GR+ D R ++ML+
Sbjct: 411 CCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLS 464
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE V EAN F EM E P V + T + + ++D AL+ +MK
Sbjct: 305 GLCKESRVEEANGLFDEMCE-MGLVPNGV-TFTTLIDGQCKHGKIDLALRNFEIMKDRGI 362
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ ++ L + D +L + M+G GF P+ I + ++ C + D+D+
Sbjct: 363 RPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFK--PDKITFTTLMDGCCKDGDMDSA 420
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+MV G D + + + L ++ +V + E +M+ +P I
Sbjct: 421 LEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDC 480
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + ++ + +G +P + N L+ G G++ + + MLN ++
Sbjct: 481 FCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPN 540
Query: 241 DVTMQKL 247
D+T L
Sbjct: 541 DITFNIL 547
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 38/242 (15%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL ++ +I + +++A++ LR++K N + L ++KLN W+
Sbjct: 155 VLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPG--HCWE 212
Query: 89 IMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG------AF-------- 133
+ + + PN+ ++N ++ C DV N FD++ G +F
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272
Query: 134 ---------------------PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
PD TY+ + L K +V E F EM + P +
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T I + + A+ + + + GI P + N L+ GL G L + R+ EM
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392
Query: 233 LN 234
+
Sbjct: 393 IG 394
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + + R K AL LR M+ P +K + + L T VQ D M+
Sbjct: 513 YNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGML 572
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF--------------------------- 124
IGF +P+++ Y+A + +CN +VD+ F
Sbjct: 573 QIGF--LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSK 630
Query: 125 --------DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++M+ G FP +TYN++ + K ++ + ++ +M+ E QPT + +
Sbjct: 631 LDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTS 690
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I A P+ AI++W + E G P + + GLR GR+ + EEM+ +
Sbjct: 691 LIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTK 749
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
E+ P F+ + L K+ + L M+ +G ++M+N ++ LCN + +
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCK--GKILMFNDLIHELCNMDRL 491
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + F+QM G P TYN +F + + K + EM N P NC
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEM 551
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L + A++ + +L+ G LP + + + G+ N G + D
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +AN F M E W EHVL T ++ + +VD A++ L M+ + K
Sbjct: 225 GRPDDANDVFQRMSE-LGWVDEHVLT--TLMVAFSKWGKVDGAVELLGSMEALGMRLSEK 281
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S + K + ++ MV GF + +L MY+ ++ LC D+ + F
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVV--DLAMYSVLIEGLCQQKDIARAVKLFK 339
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+M G PD + E + + F +E
Sbjct: 340 EMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA K EM+E+ + V+ Y + + ++++A+ +L M E
Sbjct: 624 GFRKSSKLDEAQKIMEEMLEKGLF--PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK 681
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ +D ++LW M G PN I Y A + L ++
Sbjct: 682 QPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG--CAPNNIAYTAFINGLRKCGRIETA 739
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+F++MV G D+ + LI N
Sbjct: 740 LTYFEEMVTKGFELDTFSLLYFINFLISN 768
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + + R K AL LR M+ P +K + + L T VQ D M+
Sbjct: 513 YNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGML 572
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF--------------------------- 124
IGF +P+++ Y+A + +CN +VD+ F
Sbjct: 573 QIGF--LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSK 630
Query: 125 --------DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++M+ G FP +TYN++ + K ++ + ++ +M+ E QPT + +
Sbjct: 631 LDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTS 690
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I A P+ AI++W + E G P + + GLR GR+ + EEM+ +
Sbjct: 691 LIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTK 749
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
E+ P F+ + L K+ + L M+ +G ++M+N ++ LCN + +
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCK--GKILMFNDLIHELCNMDRL 491
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + F+QM G P TYN +F + + K + EM N P NC
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEM 551
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L + A++ + +L+ G LP + + + G+ N G + D
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +AN F M E W EHVL T ++ + +VD A++ L M+ + K
Sbjct: 225 GRPDDANDVFQRMSE-LGWVDEHVLT--TLMVAFSKWGKVDGAVELLGSMEALGMRLSEK 281
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S + K + ++ MV GF + +L MY+ ++ LC D+ + F
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGF--VVDLAMYSVLIEGLCQQKDIARAVKLFK 339
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+M G PD + E + + F +E
Sbjct: 340 EMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA K EM+E+ + V+ Y + + ++++A+ +L M E
Sbjct: 624 GFRKSSKLDEAQKIMEEMLEKGLF--PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK 681
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ +D ++LW M G PN I Y A + L ++
Sbjct: 682 QPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG--CAPNNIAYTAFINGLRKCGRIETA 739
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+F++MV G D+ + LI N
Sbjct: 740 LTYFEEMVTKGFELDTFSLLYFINFLISN 768
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 6/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+VEA +T+ EM+++ + P+ ++A+ T L L++ K+ +A+K VMK +
Sbjct: 381 GWCRIKNLVEAGRTWNEMIDK-GFKPD-IIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 438
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K V+ +D MV G P+ +Y ++ N +D V
Sbjct: 439 SPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSG--CQPDAAVYTCLITGFGNQKKMDKV 496
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G D TYN + + + + + + +MI+N Q T +
Sbjct: 497 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKS 556
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E +W + G P + S V + GL GR + R+ EEM+ + +
Sbjct: 557 YFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAP 616
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+ K F + D + L R+ K
Sbjct: 617 QLDYNKFAADFSRAGKP--DILEELARKMK 644
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 6/245 (2%)
Query: 10 EANKTFG--EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
E K G E+++R+ ++ V L L R K EA ++ + P L+ +
Sbjct: 318 ERKKAVGVFELMKRYNFD-AGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTY 375
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L+ ++ + + W+ M+ GF P++I ++ ++ L + + F+ M
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFK--PDIIAHHTMLEGLLKCKKKSDAIKLFEVM 433
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G P+ TY ++ L K K+ E +F EM+ + QP IT + +
Sbjct: 434 KAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKM 493
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ + + E G + N L+ + N D R ++M+ I T +
Sbjct: 494 DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMM 553
Query: 248 KKAFY 252
K+++
Sbjct: 554 MKSYF 558
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 8/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
GW ++ N+++ N+ EM ++ F+ + V+AY + + K+ DEA+ MK
Sbjct: 233 GWSQQQNLIKVNEVCREMEDKGFQLD---VVAYGIIMNAHCKAKKFDEAIGLYHEMKARG 289
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P+ + ++ L ++ +++ GF +P YNAVVG C + +D+
Sbjct: 290 VRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGF--VPEAPTYNAVVGAYCWSLRMDD 347
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW--QPTPLNCATA 177
+R +M G P+S T++++ LIK +++ E + F M E+ +P+
Sbjct: 348 AYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIM 407
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M + + + A+ +W+ + GILP + L+ L + +L + ++ +EML+ I
Sbjct: 408 VRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGI 467
Query: 238 LIYDVTMQKLKKAFYN 253
LK+A +
Sbjct: 468 RPPAKMFSTLKEALVD 483
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGE--NCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++ L LI+G++++EA R M G C P++ + + + V +WD
Sbjct: 367 FDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDE 426
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G G ++P + M++ +V LC+ + +D ++F +M+ G P + ++ + E L+
Sbjct: 427 MKGKG--ILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDA 484
Query: 150 KKVHEVENF 158
H +F
Sbjct: 485 GMEHVAMHF 493
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 5/183 (2%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-----QVDEALKFLRVMKGENCF 61
N + ++K E +E FE + E + G ++D+A + + MK
Sbjct: 302 NGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIG 361
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F L L+K ++ M G F P++ Y +V + CN +D
Sbjct: 362 PNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAV 421
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+D+M G P ++ + L K+ E +F EM+ +P +T L
Sbjct: 422 AVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEAL 481
Query: 182 LDA 184
+DA
Sbjct: 482 VDA 484
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 2/186 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EA+K M+ P + F+ +D+L K +++D M + L P++ Y
Sbjct: 172 EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKL--RLDPDIKSYTI 229
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ ++ V +M G D + Y +I K KK E +HEM
Sbjct: 230 LLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARG 289
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+P+P T I L + A+E + +G +P + N ++ R+ D
Sbjct: 290 VRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAY 349
Query: 227 RFAEEM 232
R EM
Sbjct: 350 RMVGEM 355
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + + R K AL LR M+ P +K + + L T VQ D M+
Sbjct: 513 YNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGML 572
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF--------------------------- 124
IGF +P+++ Y+A + +CN +VD+ F
Sbjct: 573 QIGF--LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSK 630
Query: 125 --------DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++M+ G FP +TYN++ + K ++ + ++ +M+ E QPT + +
Sbjct: 631 LDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTS 690
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I A P+ AI++W + E G P + + GLR GR+ + EEM+ +
Sbjct: 691 LIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTK 749
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
E+ P F+ + L K+ + L M+ +G ++M+N ++ LCN + +
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCK--GKILMFNDLIHELCNMDRL 491
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + F+QM G P TYN +F + + K + EM N P NC
Sbjct: 492 EEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEM 551
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L + A++ + +L+ G LP + + + G+ N G + D
Sbjct: 552 VQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDA 599
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +AN F M E W EHVL T ++ + +VD A++ L M+ + K
Sbjct: 225 GRPDDANDVFQRMSE-LGWVDEHVLT--TLMVAFSKWGKVDGAVELLGSMEALGMRLSEK 281
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S + K + ++ MV GF + +L MY+ ++ LC D+ + F
Sbjct: 282 TLSVLVHGFTKQGRVDKAMDMFAKMVSYGF--VVDLAMYSVLIEGLCQQKDIARAVKLFK 339
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+M G PD + E + + F +E
Sbjct: 340 EMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINE 375
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA K EM+E+ + V+ Y + + ++++A+ +L M E
Sbjct: 624 GFRKSSKLDEAQKIMEEMLEKGLF--PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK 681
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ +D ++LW M G PN I Y A + L ++
Sbjct: 682 QPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG--CAPNNIAYTAFINGLRKCGRIETA 739
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+F++MV G D+ + LI N + E+++ +
Sbjct: 740 LTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLKEVLQKD 785
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM ER VL + T + L R ++DEAL+ + M GE C
Sbjct: 120 GFCKAGQVDQAFELLDEMKER--GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEEC 176
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIM---VGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ ++ L K N ++L+D M P++I Y+ V+ LC V
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + +F +M G P+ +TY+ + + L K + E M + + ++
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L DE E A + + +L++G P + NV + GL GR+ + R EM+ ++
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356
Query: 238 LIYDVTMQKLKKAFYNESR 256
+T + F R
Sbjct: 357 TPDVITYSSIIDGFCKAGR 375
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 122/238 (51%), Gaps = 7/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWN----PEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G K + EA + F +M +R+E + P+ V++Y T + L + ++VD+A ++ + M+
Sbjct: 189 GLCKANRIDEALELFDDMEKRYEASHGCEPD-VISYSTVIDALCKAQRVDKAYEYFKRMR 247
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
C P + +S+ +D L K++ + ++L M GF + N+I +NA++ L N++
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI--NIIDFNAMLHALWKNDE 305
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ +FF++++ G P+ +TYN+ L K +V E EM++++ P + ++
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
I A + A +++ ++ + +P + LL G + + R E+M+N
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + EMVE + P+ V+ Y + + + ++D+A M C
Sbjct: 334 GLCKAGRVDEAYRILLEMVES-KVTPD-VITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F L + S ++ + MV GF +P L YN ++ +C + V++
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF--IPGLQTYNVLMDCVCGADSVESA 449
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M PD TY + +CL + ++V E + F M + P C + +
Sbjct: 450 LEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 509
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
L E + A + + ++E G PL + +L+
Sbjct: 510 LCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 75/219 (34%), Gaps = 30/219 (13%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L R ++VDEA +FL VM+ +N P +++L K + + D +V
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527
Query: 92 GIGFNLM--------------------------PNLIM----YNAVVGLLCNNNDVDNVF 121
+G + P + Y+ V +C D
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAV 587
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+QMV G PD TY + L +V F +M P + I
Sbjct: 588 EVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEA 647
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
AD + A I+ ++ G P + L LR+ G
Sbjct: 648 CSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 2/197 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L + +VDEA + L M P + +S+ +D K ++
Sbjct: 325 VVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFT 384
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + +P+ + + ++ + FR + MV G P TYN++ +C+
Sbjct: 385 RM--MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCG 442
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V +H+M + + QP A I L A + A E + + + ++P A
Sbjct: 443 ADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 502
Query: 209 ANVLLVGLRNLGRLSDV 225
+ L+ L G + +
Sbjct: 503 CHALVEVLCKQGEVDEA 519
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN IMY V+ C VD F D+M G D L ++ + + L + ++ E
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN-----YILENGILPLEASANVLL 213
F M E P + T + L A+ + A+E+++ Y +G P S + ++
Sbjct: 169 FKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227
Query: 214 VGLRNLGRLSDVRRFAEEM 232
L R+ + + M
Sbjct: 228 DALCKAQRVDKAYEYFKRM 246
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 7 NVVE-ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
N VE A+K G ++ + + P VL + + + K +D A K L VM + C P +
Sbjct: 163 NSVELASKVLGVVIAK-GFTPT-VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 220
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
F+ + L K N QL + MV G + PN++ Y+ V+ LC VD+ + F
Sbjct: 221 TFTILITGLCKANRVGEAQQLLEKMVTGGCS--PNVVTYSTVINGLCKQGQVDDAYELFQ 278
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M P+ +T+N++ + L K K++ E +H M + P + + I L +
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Query: 186 EPEFAIEIWNYILENGILPLEA-SANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A +++ I E+G+ A + + L G LGR++D R ++++
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 41/289 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G VVEA + F M + + P+ V+ Y + L + + DEA LR M C
Sbjct: 53 GLCDAGRVVEALEHFRAMAK--DCAPD-VMTYTALVHALCKAGKFDEAQGMLREMIARGC 109
Query: 61 FPTLKFFSNALDILVK--------------------------------LNDSTHTVQLWD 88
P FS +D L K L + ++V+L
Sbjct: 110 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 169
Query: 89 IMVG--IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++G I P ++M+N V+ C D+D+ ++ + M+ G P+ T+ ++ L
Sbjct: 170 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 229
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K +V E + +M+ P + +T I L + + A E++ + P
Sbjct: 230 CKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 289
Query: 207 ASANVLLVGLRNLGRLSDVR----RFAEEMLNRRILIYDVTMQKLKKAF 251
+ N+L+ GL R+ + R R E I+ Y+ + L K+F
Sbjct: 290 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 40/272 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V EA + +MV +P +V+ Y T + L + QVD+A + ++M+ NC
Sbjct: 228 GLCKANRVGEAQQLLEKMVTG-GCSP-NVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L K QL+ M G P++I YN+++ LC + VD
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG--CAPDIITYNSLIDGLCKSFQVDEA 343
Query: 121 FRFFDQM---------------VFHGAF---------------------PDSLTYNMIFE 144
F+ F + +FHG PD TY +
Sbjct: 344 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 403
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K + EV EM + P + + L + + E AI++++ + G
Sbjct: 404 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 463
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
N+++ G+ + + E+++++R
Sbjct: 464 DALIYNLVVEGMARASKHNKALAVLEQVIDKR 495
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNAL---DILVKLNDSTHTVQLWDIMV 91
LIRG +D A++ L MK F NA+ ++ L D+ V+ +
Sbjct: 15 LIRGFSSAGDLDIAIQLLEEMKSNG------FEGNAVVHTTLMKGLCDAGRVVEALEHFR 68
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + P+++ Y A+V LC D +M+ G PD++T++ + + L K
Sbjct: 69 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDA-DEPEFAIEIWNYILENGILPLEASAN 210
+ ++I+ + T I L + + E A ++ ++ G P N
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
+++ G L + E M+ +
Sbjct: 189 LVINGFCKAKDLDSAYKLLEVMIEK 213
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 38/268 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A + F +V++ ++P+ + Y + ++ + + E ++ + M +
Sbjct: 369 GYAALGRMADACRIFSMLVDK-GFSPD-LATYTSLILEYCKTSRAVEVVELVEEMASKGF 426
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM--------------- 98
P + S L L + N + +QL+D M G +NL+
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486
Query: 99 --------------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
P+ +A+V LC D+ + +M G +YN +
Sbjct: 487 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLS 546
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L + ++ E F M+ P I+ L A + + A E+ + + G P
Sbjct: 547 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ G GR R+ EEM
Sbjct: 607 DIETCNTLIGGYCKSGRADLARKLLEEM 634
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ NV EA + F MV+R P+ VL Y + + K VDEA+ + + +N
Sbjct: 309 GYCSRENVHEARELFNRMVKR-GLEPD-VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ +D L +H +L D M G P+++ YN ++ LC +
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA--QPPDVVTYNILIDALCKEGRILEA 424
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P+ +TYN + + V+ ++ F+ M+K+ +P LN I
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + AI ++ + ++P AS N L+ GL NLGR+ V+ +EM +
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 4/250 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A F MV F P V ++ L ++R A+ ++ + P++
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSV--FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT 92
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F+ ++ + + L ++ G+ PNL+ +N ++ C N + F
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQ--PNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
++ G D TY + L KN ++ + EM K+ QP + + I L
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A+ + + I E GIL + N L+ G ++GR +V + +M+ + D T
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 247 LKKAFYNESR 256
L A E R
Sbjct: 271 LIDALCKEGR 280
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK-------------- 76
Y T + L + Q+ AL L+ M+ + P L +S +D L K
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 77 -----LNDSTHTVQLWDIMVGIGF--------------NLMPNLIMYNAVVGLLCNNNDV 117
L D+ L D +G N+ P+ +N ++ LC +
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
M G PD +TYN + E + VHE F+ M+K +P LN
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I + A+ ++ + ++P AS N L+ GL N GR+S V++ +EM
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Query: 238 LIYDVTMQKLKKAFYNESR 256
VT L A E R
Sbjct: 402 PPDVVTYNILIDALCKEGR 420
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 38/244 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ NV A F MV+ P+ +L Y + + + VDEA+ + M+ +N
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKS-GLEPD-ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D L L H +L D M G + P++I YN ++ C D
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS--PDVITYNILLDAFCKTQPFDKA 564
Query: 121 FRFFDQMV----------------------------------FHGAFPDSLTYNMIFECL 146
F Q+V HG P+ TY ++ L
Sbjct: 565 ISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K+ E +M N+ P + I +LL +E + A ++ ++ G++ +E
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIE 684
Query: 207 ASAN 210
S N
Sbjct: 685 KSLN 688
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 42/266 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + K EM P V+ Y + L + ++ EAL L +M +
Sbjct: 379 GLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P + ++ +D N+ +++ MV G
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
NL+P++ YN+++ LCN + +V D+M G PD +TYN++ +
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + + F ++++ W N A + L ++ + A + ++L +G P
Sbjct: 557 KTQPFDKAISLFRQIVEGIWPDFYTNHAI-VDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEML 233
+ +L+ L G F E ML
Sbjct: 616 TYTILINALCKDG------SFGEAML 635
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ NV EA + F MV+R P+ VL Y + + K VDEA+ + + +N
Sbjct: 309 GYCSRENVHEARELFNRMVKR-GLEPD-VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ +D L +H +L D M G P+++ YN ++ LC +
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA--QPPDVVTYNILIDALCKEGRILEA 424
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P+ +TYN + + V+ ++ F+ M+K+ +P LN I
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + AI ++ + ++P AS N L+ GL NLGR+ V+ +EM +
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 4/250 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A F MV F P V ++ L ++R A+ ++ + P++
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSV--FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT 92
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F+ ++ + + L ++ G+ PNL+ +N ++ C N + F
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQ--PNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
++ G D TY + L KN ++ + EM K+ QP + + I L
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A+ + + I E GIL + N L+ G ++GR +V + +M+ + D T
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 247 LKKAFYNESR 256
L A E R
Sbjct: 271 LIDALCKEGR 280
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK-------------- 76
Y T + L + Q+ AL L+ M+ + P L +S +D L K
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 77 -----LNDSTHTVQLWDIMVGIGF--------------NLMPNLIMYNAVVGLLCNNNDV 117
L D+ L D +G N+ P+ +N ++ LC +
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
M G PD +TYN + E + VHE F+ M+K +P LN
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I + A+ ++ + ++P AS N L+ GL N GR+S V++ +EM
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Query: 238 LIYDVTMQKLKKAFYNESR 256
VT L A E R
Sbjct: 402 PPDVVTYNILIDALCKEGR 420
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 38/240 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ NV A F MV+ P+ +L Y + + + VDEA+ + M+ +N
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKS-GLEPD-ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D L L H +L D M G + P++I YN ++ C D
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS--PDVITYNILLDAFCKTQPFDKA 564
Query: 121 FRFFDQMV----------------------------------FHGAFPDSLTYNMIFECL 146
F Q+V HG P+ TY ++ L
Sbjct: 565 ISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K+ E +M N+ P + I +LL +E + A ++ ++ G++ +E
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIE 684
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 42/266 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + K EM P V+ Y + L + ++ EAL L +M +
Sbjct: 379 GLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P + ++ +D N+ +++ MV G
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
NL+P++ YN+++ LCN + +V D+M G PD +TYN++ +
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + + F ++++ W N A + L ++ + A + ++L +G P
Sbjct: 557 KTQPFDKAISLFRQIVEGIWPDFYTNHAI-VDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEML 233
+ +L+ L G F E ML
Sbjct: 616 TYTILINALCKDG------SFGEAML 635
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V EA + EMV+R P V+ Y T L Q++EA + + M G N P F
Sbjct: 252 VNEAVEFLSEMVDR--GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D L K + + + M G PN YNA++ C +N +D + M
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAE--PNAYTYNALMDGYCLHNQMDEAIKVLGIM 367
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P+ +YN++ K+K+++E + EM + P + +T + L P
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ ++ + +G+LP + ++LL G G L + + +EM RRI
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 9/259 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
++ +A +F MV R P V+ + FL ++ + KQ A+ M +
Sbjct: 76 SIDDALTSFYRMV-RMNPRPS-VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ ++ L +L+ V + M +G + P+ I +N ++ LCN + F++
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLG--IQPDAITFNTLINGLCNEGKIKEAVGLFNE 191
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV+ G P+ ++YN + L KN F +M +N +P + T I L
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRL 251
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A+E + +++ GI P + N +L G +LG+L++ R +EM+ R ++ VT
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311
Query: 247 L-----KKAFYNESRSMRD 260
L K+ +E+R + +
Sbjct: 312 LVDGLCKEGMVSEARCVSE 330
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V EA M E+ + Y + Q+DEA+K L +M G+ C
Sbjct: 315 GLCKEGMVSEARCVSETMTEK--GAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ ++ K +L M NL P+ + Y+ ++ LC
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEK--NLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G PD + Y+++ + K+ + E EM + +P + I
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A + E A E+++ + +GI P + NV++ GL G + F +M
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 7 NVVEANKTFGEMVERFEWNP--------------EHVLAYETFLITLIRGKQVDEALKFL 52
+VVE K G + ++ +++ +V + + L R VD A+ +
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 53 RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
M P F+ ++ L V L++ MV G PN+I YN V+ LC
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE--PNVISYNTVINGLC 212
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
N + R F +M + P+ +TYN I + L K++ V+E F EM+ P +
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T + + A ++ ++ ++P + N+L+ GL G +S+ R +E M
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332
Query: 233 LNR 235
+
Sbjct: 333 TEK 335
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + EA K G M+ + ++ +Y + + K+++EA + L M +N
Sbjct: 350 GYCLHNQMDEAIKVLGIMIGK--GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + L ++ + L+ M G L+P+L+ Y+ ++ C + +D
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG--LLPDLMAYSILLDGFCKHGHLDEA 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M P+ + Y ++ + K+ + F ++ + +P I
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
LL + A E + + ++G LP S NV++ G S + +EM+ +R
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585
Query: 241 DVTMQKL 247
T Q L
Sbjct: 586 SSTFQML 592
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K + +A ++F EM++ F+ P+ V Y T L ++R + V AL M NC
Sbjct: 135 AYAKMDMIEKAVESF-EMMKDFDCKPD-VFTYNTVLHVMVRKEVVLLALGIYNRMLKLNC 192
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS +D + K + + +Q++D M ++PN I Y ++ LC D
Sbjct: 193 LPNIATFSILIDGMCKSGKTQNALQMFDEMTQ--RRILPNKITYTIIISGLCQAQKADVA 250
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R F M HG PDS+TYN + K +V E K+ + + I
Sbjct: 251 YRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDG 310
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L A E A + + E+ I P +++ GL G+ D R EM R ++
Sbjct: 311 LFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGEN 59
G + G V +A + F EM E+ P V+ + + + +++A L F ++ G N
Sbjct: 415 GMCRSGLVGDAQQIFNEM-EKHGCYPS-VVTFNALIDGFCKAGNIEKAQLLFYKMEIGRN 472
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDI-MVGIGFNLM---------PNLIMYNAVVG 109
L+ A +L + T QL D ++ +N++ PN+I YN ++
Sbjct: 473 PSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIH 532
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C +++ F+ F ++ G PDS+TY + L+ + + +++KN P
Sbjct: 533 GFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTP 592
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 17/189 (8%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + + R V +A + M+ C+P++ F+ +D K + QL
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGN-IEKAQLLFYK 466
Query: 91 VGIGFNLMPNLIM--------------YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ IG N P+L + +V LC++ + + Q+ G P+
Sbjct: 467 MEIGRN--PSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNI 524
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TYN++ K ++ F E+ P + T I LL A+ E A + +
Sbjct: 525 ITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQ 584
Query: 197 ILENGILPL 205
IL+NG P+
Sbjct: 585 ILKNGCTPI 593
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 92/260 (35%), Gaps = 37/260 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A + F EM +R P + Y + L + ++ D A + MK C
Sbjct: 205 GMCKSGKTQNALQMFDEMTQR-RILPNKI-TYTIIISGLCQAQKADVAYRLFIAMKDHGC 262
Query: 61 FPT-----------------------LKFFSNALDILVKLNDST-----------HTVQL 86
P LK+F +L K S Q+
Sbjct: 263 IPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQV 322
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
W + N+ P++I+Y ++ L + R ++M G PD+ YN + +
Sbjct: 323 WYRKM-TEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ E ++ E+ KN+ + I + + A +I+N + ++G P
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSV 441
Query: 207 ASANVLLVGLRNLGRLSDVR 226
+ N L+ G G + +
Sbjct: 442 VTFNALIDGFCKAGNIEKAQ 461
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 39/266 (14%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G +A +TFG M + F+ P+ V Y L LI+ + AL M NC
Sbjct: 136 YLKMGLTDKAMETFGSMRD-FDCTPD-VYTYNMILDVLIQKNFLLLALTVYTRMMKLNCL 193
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + FS +D L K + + L+D M G ++P+ Y V+ LC + VD+ +
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRG--ILPDAFTYCVVISGLCRSKRVDDAY 251
Query: 122 RFFDQMVFHGAFPDSLTYNMI-------------------------------FECLIKN- 149
R FD+M G PD +T N + + CLI+
Sbjct: 252 RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGL 311
Query: 150 ---KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K+ +V+ + +MI++ +P + L +A + A+E+ N + E+G++P
Sbjct: 312 FRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDT 371
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
NVL+ G ++G LS+ R E+
Sbjct: 372 VCYNVLIKGFCDMGLLSEARSLQLEI 397
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
D+A++ M+ +C P + ++ LD+L++ N + ++ M+ + N +PN+ +
Sbjct: 142 TDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL--NCLPNVATF 199
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ ++ LC + +V + FD+M G PD+ TY ++ L ++K+V + F +M
Sbjct: 200 SILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKD 259
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ P + C + D + A + ++G + + L+ GL R D
Sbjct: 260 SGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYED 319
Query: 225 V----RRFAEEMLNRRILIYDVTMQKLKKA 250
V R+ E+ + + +Y + M+ L +A
Sbjct: 320 VQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGEN 59
G + G +A + F EM E+ P V + + + L + Q+++A L F ++ G N
Sbjct: 415 GMCRNGLTRDAQEIFNEM-EKLGCYPSAV-TFNSLIDGLCKTGQLEKAHLLFYKMEIGRN 472
Query: 60 CFPTL-----KFFSNALD------ILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAV 107
P+L + S+ LD ++ +L DS + + I++ + P + YN +
Sbjct: 473 --PSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNIL 530
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
V C + + ++ F +M F G PD++TY + L++ ++ + F +M KN
Sbjct: 531 VNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGC 590
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
P T +T + E A +W L N
Sbjct: 591 TPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRN 623
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 3/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L R K+ ++ R M +N P + ++ + L + ++L +
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G ++P+ + YN ++ C+ + ++ H FP+ TY+++ + +
Sbjct: 361 EMTESG--VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
N + + F+EM K P+ + + I L + E A + Y +E G P
Sbjct: 419 NGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKA-HLLFYKMEIGRNP 473
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+ R + P +V Y + + R +A + M+ C+P+ F++ +D L K
Sbjct: 397 ISRHDCFP-NVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTG 455
Query: 79 --DSTHTVQLWDIMVGIGFNLM------PNLIMYNA----VVGLLCNNNDVDNVFRFFDQ 126
+ H + + + +G +L P+ ++ +A +V LC++ + +R Q
Sbjct: 456 QLEKAHLL-FYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQ 514
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
+ G P TYN++ K + F EM P + T I LL
Sbjct: 515 LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574
Query: 187 PEFAIEIWNYILENGILP 204
E A ++++ + +NG P
Sbjct: 575 EEDAYKVFDQMEKNGCTP 592
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 5/147 (3%)
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
D F M PD TYNMI + LI+ + + M+K P +
Sbjct: 142 TDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSI 201
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L + + A+ +++ + + GILP + V++ GL R+ D R ++M +
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG 261
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRFD 263
+ VT L F M DR D
Sbjct: 262 VGPDFVTCNALLNGF-----CMLDRVD 283
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN+ Y+ ++ +C N + F++M G +P ++T+N + + L K ++ +
Sbjct: 401 DCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKA 460
Query: 156 ENFFHEM---------IKNEWQPTP-LNCATAITM---LLDADEPEFAIEIWNYILENGI 202
F++M ++ P+ L+ A+ M L D+ A I + ++G
Sbjct: 461 HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD 520
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + N+L+ G LG + + EM
Sbjct: 521 APGIYTYNILVNGFCKLGNFNGAYKLFREM 550
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+V A F E+ +R P V+++ T + + V+E + VM+ E
Sbjct: 257 GFCKAGDVGNARLVFDEIPKR-GLRPT-VVSFNTLISGCCKSGDVEEGFRLKGVMESEGV 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS ++ L K L+D M G G L+PN + + ++ C VD
Sbjct: 315 CPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG--LVPNGVTFTTLIDGQCKGGKVDLA 372
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M+ G PD +TYN + L K + E +EM + +P + T I
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+EI ++E GI + + L+ GL GR+ D R +ML+
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + E + F EM R P V + T + +G +VD ALK ++M +
Sbjct: 327 GLCKEGRLDEGSLLFDEMCGR-GLVPNGV-TFTTLIDGQCKGGKVDLALKNFQMMLAQGV 384
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ ++ L K+ D +L + M G L P+ I + ++ C + D+++
Sbjct: 385 RPDLVTYNALINGLCKVGDLKEARRLVNEMTASG--LKPDKITFTTLIDGCCKDGDMESA 442
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+MV G D + + + L + +VH+ +M+ ++P I
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + ++ + +G +P + N L+ GL G++ + + + MLN +
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPN 562
Query: 241 DVT 243
D+T
Sbjct: 563 DIT 565
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G++ A + MVE E +A+ + L R +V +A + L M
Sbjct: 432 GCCKDGDMESALEIKRRMVE--EGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K D +L M G +P ++ YNA++ LC + N
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH--VPGVVTYNALMNGLCKQGQMKNA 547
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
D M+ G P+ +TYN++ + K+ +V+ F E
Sbjct: 548 KMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE 588
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR--VMKGE 58
G+ + N+ +A + + MVE + P++V +Y + L + ++DE+LK L VM+G+
Sbjct: 54 GFARSNNMEKAREVYQHMVES-GYKPDNV-SYHILIHGLAKIGKLDESLKILSEMVMRGQ 111
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN---------------------- 96
P+++ +S+ + L K H L+D M+ G +
Sbjct: 112 T--PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDA 169
Query: 97 -----------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
PN+ +YN ++ LC++ ++ F +M H PD +TYN + +
Sbjct: 170 SERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDA 229
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ K ++V E F M + P + +T I L E E A+E++ +LE G P
Sbjct: 230 VCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + L+ GL ++ R E+M
Sbjct: 290 KYTYTTLISGLCRAEKVIQARELFEKM 316
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + +L++ + +E+ K L M C P + F+ + + N+ +++
Sbjct: 10 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 69
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G+ P+ + Y+ ++ L +D + +MV G P Y+ + L K
Sbjct: 70 HMVESGYK--PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAK 127
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++V + F EMI+ P L I L A + + A E + + ++G P
Sbjct: 128 ARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
NVLL GL + G+L EM + ++ Y+ + + KA
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 10/246 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + +A + FG M+E P Y T + L R ++V +A + M + C
Sbjct: 264 GLCRTGELEKALEVFGSMLEA-GCKPNK-YTYTTLISGLCRAEKVIQARELFEKMT-QAC 320
Query: 61 FPTLKFFSNALDI-LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P N+L K +L+ M G G L P ++ +N ++ C +
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG-GAGLQPTIVTFNTLIDGFCKLGKLGR 379
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M G DS TY ++ L + K+ E + +M + ++ P++C + +
Sbjct: 380 ANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 439
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A ++ ++G +P + +L L LGR+ D ++ E R
Sbjct: 440 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR---- 495
Query: 240 YDVTMQ 245
D+T Q
Sbjct: 496 -DITAQ 500
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V A F E+ +R P V+++ T + + V+E + VM+ E
Sbjct: 151 GFCKVGGVGSARLVFDEIPKR-GLRPT-VVSFNTLISGCCKAGAVEEGFRLKGVMESERV 208
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS ++ L K L+D M G G L+PN + + ++ C VD
Sbjct: 209 CPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG--LVPNGVTFTVLIDGQCKGGKVDLA 266
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M+ G PD +TYN + L K + E +EM + +P + T I
Sbjct: 267 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDG 326
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+EI ++E GI + + VL+ GL GR+ D R +ML+
Sbjct: 327 CCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLS 380
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + E + F EM + P V + + +G +VD ALK ++M +
Sbjct: 221 GLCKEGRLDEGSLLFDEMCGK-GLVPNGV-TFTVLIDGQCKGGKVDLALKNFQMMLAQGV 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ ++ L K+ D +L + M G L P+ I + ++ C D+++
Sbjct: 279 RPDLVTYNALINGLCKVGDLKEARRLVNEMSASG--LRPDRITFTTLIDGCCKYGDMESA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+MV G D + + ++ L ++ +VH+ E +M+ ++P +
Sbjct: 337 LEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDC 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
++ + +G +P + N L+ GL G++ + + + MLN +
Sbjct: 397 FCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPN 456
Query: 241 DVTMQKLKKAFYNESRSMR-DRFDS 264
D+T L + S+ D F+S
Sbjct: 457 DITYNILLEGHSKHGSSVDVDIFNS 481
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+A+ + L R +V +A + LR M P ++ +D K + +L
Sbjct: 353 VAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKE 412
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G +P ++ YNA++ LC V N D M+ G P+ +TYN++ E K+
Sbjct: 413 MQSDGH--VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKH 470
Query: 150 KKVHEVENFFHE 161
+V+ F E
Sbjct: 471 GSSVDVDIFNSE 482
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 7 NVVE-ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
N VE A+K G ++ + + P VL + + + K +D A K L VM + C P +
Sbjct: 211 NSVELASKVLGVVIAK-GFTPT-VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
F+ + L K N QL + MV G + PN++ Y+ V+ LC VD+ + F
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCS--PNVVTYSTVINGLCKQGQVDDAYELFQ 326
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M P+ +T+N++ + L K K++ E +H M + P + + I L +
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Query: 186 EPEFAIEIWNYILENGILPLEA-SANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A +++ I E+G+ A + + L G LGR++D R ++++
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 41/289 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G VVEA + F M + + P+ V+ Y + L + + DEA LR M + C
Sbjct: 101 GLCDAGRVVEALEHFRAMAK--DCAPD-VMTYTALVHALCKAGKFDEAQGMLREMVAQGC 157
Query: 61 FPTLKFFSNALDILVK--------------------------------LNDSTHTVQLWD 88
P FS +D L K L + ++V+L
Sbjct: 158 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 217
Query: 89 IMVG--IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++G I P ++M+N V+ C D+D+ ++ + M+ G P+ T+ ++ L
Sbjct: 218 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 277
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K +V E + +M+ P + +T I L + + A E++ + P
Sbjct: 278 CKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 337
Query: 207 ASANVLLVGLRNLGRLSDVR----RFAEEMLNRRILIYDVTMQKLKKAF 251
+ N+L+ GL R+ + R R E I+ Y+ + L K+F
Sbjct: 338 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 40/272 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V EA + +MV +V+ Y T + L + QVD+A + ++M+ NC
Sbjct: 276 GLCKANRVGEAQQLLEKMV--MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 333
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L K QL+ M G P++I YN+++ LC + VD
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG--CAPDIITYNSLIDGLCKSFQVDEA 391
Query: 121 FRFFDQM---------------VFHGAF---------------------PDSLTYNMIFE 144
F+ F + +FHG PD TY +
Sbjct: 392 FQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K + EV EM + P + + L + + E AI++++ + G
Sbjct: 452 EYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTD 511
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
N+++ G+ + E+++++R
Sbjct: 512 DALIYNLVVEGMARASKHDKALAVLEQVIDKR 543
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNAL---DILVKLNDSTHTVQLWDIMV 91
LIRG +D A++ L MK F NA+ ++ L D+ V+ +
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSG------FEGNAVVHTTLMKGLCDAGRVVEALEHFR 116
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + P+++ Y A+V LC D +MV G PD++T++ + + L K
Sbjct: 117 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGS 176
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDA-DEPEFAIEIWNYILENGILPLEASAN 210
+ ++I+ + T I L + + E A ++ ++ G P N
Sbjct: 177 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
+++ G L + E M+ +
Sbjct: 237 LVINGFCKAKDLDSAYKLLEVMIEK 261
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 38/268 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A + F +V++ ++P+ + Y + ++ + + E ++ + M +
Sbjct: 417 GYAALGRMADACRIFSMLVDK-GFSPD-LATYTSLILEYCKTSRAVEVVELVEEMASKGF 474
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM--------------- 98
P + S L L + N + +QL+D M G +NL+
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534
Query: 99 --------------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
P+ +A+V LC D+ + +M G +YN +
Sbjct: 535 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLS 594
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L + ++ E F M+ P I+ L A + + A E+ + + G P
Sbjct: 595 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ G GR R+ EEM
Sbjct: 655 DIETCNTLIGGYCKSGRADLARKLLEEM 682
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 70 ALDILVKLNDSTHTVQLW-DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
ALD+L +LN + L+ + M I MPN Y ++ + D+D + ++M
Sbjct: 28 ALDMLCRLNRRQEALALFRNAMARI---CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMK 84
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G +++ + + + L +V E F M K + P + + L A + +
Sbjct: 85 SSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFD 143
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A + ++ G P + + L+ GL G R E+++ R + D + +
Sbjct: 144 EAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETII 203
Query: 249 KAFYNESRSM 258
+ N+ S+
Sbjct: 204 QRLCNKYNSV 213
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY + + + DEA+K M+ C
Sbjct: 275 GWGHEKDLLMVKTMYQEMIDA-GIRPD-VVAYGMLISAFCKSGKCDEAIKVFYEMEASGC 332
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L ++ ++ GF + + NAVVG C + +
Sbjct: 333 MPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPM--EVPTCNAVVGAYCRASKFQHA 390
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M P+S TY++I LIK++K E N F M + +P + M
Sbjct: 391 FKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGM 450
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A+++W + E G+LP + L+ GL RL + + +EML++ I
Sbjct: 451 FCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPP 510
Query: 241 DVTMQKLKKAFYNESR 256
LK+A R
Sbjct: 511 GQLFSNLKEALVQGGR 526
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 16/237 (6%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+L+ +TF + + R ++V EA++ M L ++ +D L K
Sbjct: 192 LLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQA 251
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ M G +P+L Y ++ + D+ V + +M+ G PD + Y M+
Sbjct: 252 IYKEMKRKG-KFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISA 310
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ K E F+EM + P+P I L + + A++ + + ++G P+
Sbjct: 311 FCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSG-FPM 369
Query: 206 EASANVLLVG-------LRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKAF 251
E +VG ++ ++ D R + N R IL Y + QK ++A+
Sbjct: 370 EVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAY 426
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 3/232 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
+VE E + ++ P + L+Y L + K++D+A+ F+ +M C+P +
Sbjct: 100 GLVEPAMEVLEQIPKYGCTP-NSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVS 158
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + + + L + G G + P LI YN V+ L D+
Sbjct: 159 YNTLLTALCRNGEVDVAIDLLHQLKGKGCS--PVLISYNTVIDGLTKAGKTKEALELLDE 216
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ G PD +TY I L + K+ E F ++ +PT + + L E
Sbjct: 217 MISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRE 276
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI++++Y++ NG +P E++ +L+ GL G + + R ++ +R ++
Sbjct: 277 THNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A K EM + P +V+ + + L R V+ A++ L + C P ++
Sbjct: 69 DAEKLMEEMAHK--GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L K + ++MV G P+++ YN ++ LC N +VD Q+
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRG--CYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKG 184
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P ++YN + + L K K E EMI QP + T + L D+ E
Sbjct: 185 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEE 244
Query: 190 AIEIWNYILENGILPLEASANVLLVGL 216
AI + + + GI P N +L+GL
Sbjct: 245 AIRTFCKVQDMGIRPTVVLYNAILLGL 271
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y L + + +VD+A++FL + P ++ L L +L +
Sbjct: 16 IITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLME 75
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G PN++ +N ++ LC V+ +Q+ +G P+SL+YN + K
Sbjct: 76 EMAHKGCP--PNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCK 133
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
KK+ + F M+ P ++ T +T L E + AI++ + + G P+ S
Sbjct: 134 QKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLIS 193
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N ++ GL G+ + +EM+++ + +T + E +
Sbjct: 194 YNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I YN V+ +C VD+ F + + +G P++++YN++ + L ++ + E
Sbjct: 14 PDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKL 73
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM P + I+ L E A+E+ I + G P S N LL
Sbjct: 74 MEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCK 133
Query: 219 LGRLSDVRRFAEEMLNR 235
++ F E M++R
Sbjct: 134 QKKMDKAMAFVELMVSR 150
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A M+ER P+ V+ Y + ++ + +DEA K + MK
Sbjct: 136 GLCKMGKIDAARNVLKMMLER-SCVPD-VITYTSLIVGCCQTNALDEARKLMEKMKESGL 193
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L+ L K N +L + MV G P+ YN VV LC + +
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE--PDTFSYNTVVACLCESGKYEEA 251
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M+ PD +TYN + + K K+ E E +M+ PT + T I
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
AD A + + + GI P + N LL GL G+L + E M+ +
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W Y + L + +++DEA + L M ++C P ++ + L K+
Sbjct: 87 WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAA 146
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ +M + + +P++I Y +++ C N +D + ++M G PD++ YN +
Sbjct: 147 RNVLKMM--LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL 204
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K ++ EV EM++ +P + T + L ++ + E A +I ++E
Sbjct: 205 NGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG 264
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
P + N L+ G + ++ + R E+M+ RR +T L F R + D +
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR-LADAYR 323
Query: 264 SLERRWKTS 272
+E +K
Sbjct: 324 VMEDMFKAG 332
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 5/262 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ + E +K EMVE +Y T + L + +EA K L M + C
Sbjct: 206 GLCKQNQLEEVSKLLEEMVE--AGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D K++ +L + MVG P +I Y ++G + + +
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG--RRCAPTVITYTTLIGGFSRADRLADA 321
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R + M G PD +TYN + + L K K+ E M++ + P + + +
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + A + +LE G P + N ++ G G++ + + E M
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441
Query: 241 DVTMQKLKKAFYNESRSMRDRF 262
VT L + +R M+D F
Sbjct: 442 VVTYSTLIDGYCKANR-MQDAF 462
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 19/269 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA++ MVE+ + P+ V+ Y + L + +VD+A L +M C
Sbjct: 346 GLCKAGKLEEAHELLEVMVEK-DCAPD-VVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L F+ +D K ++ ++M + + P+++ Y+ ++ C N + +
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV--SCTPDVVTYSTLIDGYCKANRMQDA 461
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F G PD +Y+ + E L KV E + M K PT + A I
Sbjct: 462 FAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG 515
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + + A+++ + E G P + ++L+ GL R+ D + ML + +
Sbjct: 516 LCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD 575
Query: 241 DVTMQKLKKAF---------YNESRSMRD 260
T L F Y ++MRD
Sbjct: 576 VATYTSLIDGFCKINKMDAAYQCFKTMRD 604
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L L +V+EA + + +M + C PT ++ + L + +++ +M
Sbjct: 473 SYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVM 532
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G PNL Y+ ++ LC V++ D M+ G PD TY + + K
Sbjct: 533 SERGCE--PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKIN 590
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ F M + +P L I+ + E AIE+ +LE G P A+
Sbjct: 591 KMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V E +K E+++ P+ V+ Y T + + ++ +A L +
Sbjct: 416 GFCKAGKVDEGHKVL-ELMKEVSCTPD-VVTYSTLIDGYCKANRMQDAFAILGI------ 467
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ L+ L ++ D+M G P Y ++G LC+ D
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCP--PTSSHYALIIGGLCDVERGDEA 525
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ TY+++ L K K+V + N M++ P + I
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ + A + + + ++G P + + N+L+ G G + + ML +
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K M ER P ++ Y + L + K+V++A+ L VM + C P + +++
Sbjct: 524 EALKMLQVMSER-GCEP-NLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D K+N Q + M G P+ + YN ++ C + +V+ M+
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSGCE--PDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639
Query: 130 HGAFPDSLTY 139
G PD+ TY
Sbjct: 640 KGCNPDAATY 649
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ ++Y + + K++DEA++ MK C P+ ++ + L ++ Q +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ ++ G + I YN +V C + V +++V G S YN I + L
Sbjct: 160 ERLLSSGAG--ASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLF 217
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+HE E FF+ M K+ +P + I L A+ A EI+ LE+G P
Sbjct: 218 KKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVV 277
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
+ L+ G G + + R E M NR DV+ L R R+ F+ +
Sbjct: 278 ICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEV 337
Query: 266 ERR 268
+R
Sbjct: 338 VKR 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V EA + E+V R Y + TL + ++ EA F M+ +
Sbjct: 180 GFCKADRVPEAVELLNELVAR--GGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGV 237
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ +D L K N +++ + G + P++++ + ++ C VD
Sbjct: 238 RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGS--PSVVICSCLMDGFCKYGGVDEA 295
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R F+ M G P+ ++ N++ L K K++ + F E++K + +P + +T +
Sbjct: 296 WRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDG 355
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
L A + A ++ +++ G P L+ GL +LGRL + R+ E
Sbjct: 356 LCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFE 405
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 101/256 (39%), Gaps = 7/256 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F +V P +L E L + + +E LK +++M
Sbjct: 13 GKLDEALELFHSLVSDGCGLPADLLVRE-----LSKAGRAEECLKVVKLMLDRQQLRERH 67
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ +D L K +D + W + F + N + YN ++ C +D + F
Sbjct: 68 LVNITIDSLCK-SDMIDKAESWFQELK-DFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P + TYN + L + +++ E + F+ ++ + + + + AD
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
A+E+ N ++ G + A N ++ L G++ + F M + +VT
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245
Query: 246 KLKKAFYNESRSMRDR 261
L +R R +
Sbjct: 246 VLIDGLCKANRVARAK 261
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 7/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA+ F EMV + LAY + + + + EA K + ++G
Sbjct: 480 GLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-- 535
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K +++ M G +PN+ YN V+ LC + VD
Sbjct: 536 -PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG--CVPNIKTYNIVMDGLCKHGKVDEA 592
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F + M G PD ++YN+I + L K K E +MI+ P + T +
Sbjct: 593 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+ I +++ G+ P + N L+ GL RL D EML ++
Sbjct: 653 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 712
Query: 241 DVT 243
T
Sbjct: 713 ACT 715
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 8/235 (3%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM ER + P+ V Y + L + + D+A + L M P F++ +D L K
Sbjct: 251 EMNER-KVAPD-VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCK 308
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
L +M N P+ YN ++ LC +VD D+ V G PD
Sbjct: 309 AGKFERAHSLLAVMAE--RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDV 366
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+++ + L K ++ E EM P + T I L A + E A E+
Sbjct: 367 VTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLES 426
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL 247
++ +G +P + +++ GL GRL + E ML R ++ Y M+ L
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K +A++ EMV+R P+ V + + + L + + + A L VM NC
Sbjct: 270 GLCKASKTDKASEMLHEMVDR-GVTPDTV-TFNSIMDGLCKAGKFERAHSLLAVMAERNC 327
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ + L K + L D V GF +P+++ Y+ + LC +D
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF--VPDVVTYSILADGLCKRGRIDEA 385
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TYN + + L K K + ++ + + P + +
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+++ +L+ G P + L+ GL GR+ + +EM+++
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 505
Query: 241 DVTMQKLKKAFYNESRS 257
+ L + SR+
Sbjct: 506 ALAYVSLVNGYCKSSRT 522
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A K M++R P V+ Y + L R +VDEA + M ++C
Sbjct: 445 GLCKEGRLDKALKMVEGMLKR-GCTPS-VITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + ++ K + + ++ D G P + +YNA++ C +D +
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEI 557
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G P+ TYN++ + L K+ KV E F M P ++ I
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A +P+ A ++ + +++ GI P + N L+ R D + M+ +
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677
Query: 241 DVTMQKLKKAFYNESR 256
+VT L +R
Sbjct: 678 NVTYNTLISGLSQTNR 693
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 4/155 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ I YNA++ C ND D F +M PD TYN++ + L K K +
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-- 216
HEM+ P + + + L A + E A + + E P + N L+ GL
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343
Query: 217 -RNLGRLSD-VRRFAEEMLNRRILIYDVTMQKLKK 249
+N+ R D V F ++ Y + L K
Sbjct: 344 QQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-ENCF 61
KEG + EA+ EM R E ++Y T +I L + +Q+D A K R M +
Sbjct: 761 KEGRLDEASSLLSEMDTLRDE------VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 814
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
T F+ +D K + L +MV G + P++I YN V+ LC + VD +
Sbjct: 815 ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCS--PSVITYNMVITCLCKLDKVDKAW 872
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
FD+M G S++Y ++ L + E EM ++ +
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P++ YN ++ LC + D +MV G PD++T+N I + L K K
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ M + +P+ T I+ L + A ++ + + +G +P + ++L G
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375
Query: 216 LRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKAFYNE 254
L GR+ + +EM + ++ Y+ + L KA E
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ Y V+ LC +D + +MV G S T+N++ + K K++ E
Sbjct: 782 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLG 841
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
M++ P+ + IT L D+ + A E+++ + GI+ S VL+ GL G
Sbjct: 842 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 901
Query: 221 RLSDVRRFAEEMLNRRILIYDV 242
R + + EEM + I D+
Sbjct: 902 RGKEALQVLEEMASSDCEIDDL 923
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 8/210 (3%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNA-LDILVKLNDSTHTVQLWDIMVGIGFNL 97
L R K A+ F V G+ F F N L L++ S +++ M+ G+
Sbjct: 100 LQRLKDPQTAIVFF-VWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGY-- 156
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P+ Y+ V+ LC N +D F D+ G P+ Y ++ K ++ +
Sbjct: 157 APDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALE 216
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F +N P + I ++ + A+E + E + P + N+L+ GL
Sbjct: 217 IF----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLC 272
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ EM++R + VT +
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSI 302
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + EM++R +NP+ V+A+ L L++ K+ +A+K +MK +
Sbjct: 350 GWCRLKNLLEAGRVWNEMIDR-GFNPD-VVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K ++ +D+MV G P+ +Y ++ +D V
Sbjct: 408 SPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRG--CQPDAALYTCLITGFGRQKKMDMV 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + + + +MI++ +PT +
Sbjct: 466 YSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKS 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E EIW+ + + G P + S V + GL R + ++ EEML +
Sbjct: 526 YFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEK 580
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 9/272 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW E +++ + EM++ P+ V+AY + + + DEA+K M+ C
Sbjct: 279 GWGHEKDLLMVKTMYQEMIDA-GIRPD-VVAYGMLISAFCKSGKCDEAIKVFYEMEASGC 336
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ L ++ ++ GF + + NAVVG C + ++
Sbjct: 337 MPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPM--EVPTCNAVVGAYCRASKFEHA 394
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D+M P+S TY++I LIK++K E N F M + +P + M
Sbjct: 395 FKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGM 454
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A+ +W + E G+LP + L+ GL RL + + +EML++ I
Sbjct: 455 FCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPP 514
Query: 241 DVTMQKLKKAFYNESR-----SMRDRFDSLER 267
LK+A R M + D++ +
Sbjct: 515 GQLFSNLKEALVEGGRISLAQEMASKLDAIRK 546
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 10/230 (4%)
Query: 29 VLAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+L+ +TF + + R ++V EA++ M L ++ +D L K
Sbjct: 196 LLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQA 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ M G +P+L Y ++ + D+ V + +M+ G PD + Y M+
Sbjct: 256 IYKEMKRKG-KFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISA 314
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ K E F+EM + P+P I L + + A++ + ++G P+
Sbjct: 315 FCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSG-FPM 373
Query: 206 E-ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
E + N ++ + + +EM +I YDV + L K+
Sbjct: 374 EVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKS 423
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G+ +A F EM + V+ Y + + L + D+ K LR M G N P
Sbjct: 286 KDGSFDDALSLFNEM--EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D+ VK +L++ M+ G + P+ I YN+++ C N + +
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRG--IAPDTITYNSLIDGFCKENCLHEANQM 401
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV G PD +TY+++ K K+V + F E+ P + T +
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILI 239
+ + A E++ ++ G+ P + +LL GL + G L+ E+M R I I
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521
Query: 240 YDVTMQKLKKA 250
Y++ + + A
Sbjct: 522 YNIIIHGMCNA 532
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN A F +M ER V+ Y + +L + D+AL M+ +
Sbjct: 251 KSGNSALALDLFRKMEER--NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308
Query: 64 LKFFSNALDILVKLNDSTHTVQLWD-----IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+ +S+ + L ND WD + IG N++P+++ ++A++ + +
Sbjct: 309 VVTYSSLIGGLC--NDGK-----WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 361
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+++M+ G PD++TYN + + K +HE F M+ +P + + I
Sbjct: 362 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A + + ++ I G++P + N L++G G+L+ + +EM++R +
Sbjct: 422 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 480
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ V L D MV + P+L+ + ++ LC V D+MV +G PD +TY
Sbjct: 186 SEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K+ + F +M + + + + + I L + A+ ++N +
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GI + + L+ GL N G+ D + EM+ R I+ VT L F E +
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y T ++ + +++ A + + M P++ + LD L + ++++
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507
Query: 88 DIM------VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ M +GIG +YN ++ +CN + VD+ + F + G PD +TYN+
Sbjct: 508 EKMQKSRMTLGIG--------IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ L K + E + F +M ++ P
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTP 587
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 6/184 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F EMV R P V+ Y L L ++++AL+ M+
Sbjct: 458 GFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ I+ + +++ W + + + P+++ YN ++G LC +
Sbjct: 516 TLGIGIYNI---IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 572
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD TYN++ + + EM + I
Sbjct: 573 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632
Query: 180 MLLD 183
ML D
Sbjct: 633 MLSD 636
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 91/254 (35%), Gaps = 39/254 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V EA MVE + P+ V T + L +V EAL + M
Sbjct: 178 GFCLEGRVSEAVALVDRMVE-MKQRPDLV-TVSTLINGLCLKGRVSEALVLIDRMVEYGF 235
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + L+ L K +S + L+ M N+ +++ Y+ V+ LC + D+
Sbjct: 236 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEE--RNIKASVVQYSIVIDSLCKDGSFDDA 293
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G D +TY+ + L + K + EMI P
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP----------- 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D F+ I ++ E G+L + + EM+ R I
Sbjct: 343 ----DVVTFSALIDVFVKE--------------------GKLLEAKELYNEMITRGIAPD 378
Query: 241 DVTMQKLKKAFYNE 254
+T L F E
Sbjct: 379 TITYNSLIDGFCKE 392
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 58/158 (36%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ I ++ +V C V D+MV PD +T + + L +V E
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M++ +QP + + L + A++++ + E I ++++ L
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G D EM + I VT L N+ +
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G+ +A F EM + V+ Y + + L + D+ K LR M G N P
Sbjct: 257 KDGSFDDALSLFNEM--EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D+ VK +L++ M+ G + P+ I YN+++ C N + +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRG--IAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV G PD +TY+++ K K+V + F E+ P + T +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILI 239
+ + A E++ ++ G+ P + +LL GL + G L+ E+M R I I
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 240 YDVTMQKLKKA 250
Y++ + + A
Sbjct: 493 YNIIIHGMCNA 503
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN A F +M ER V+ Y + +L + D+AL M+ +
Sbjct: 222 KSGNSALALDLFRKMEER--NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S+ + L ++ M IG N++P+++ ++A++ + +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+++M+ G PD++TYN + + K +HE F M+ +P + + I
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A + + ++ I G++P + N L++G G+L+ + +EM++R +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ V L D MV + P+L+ + ++ LC V D+MV +G PD +TY
Sbjct: 157 SEAVALVDRMVEM--KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K+ + F +M + + + + + I L + A+ ++N +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GI + + L+ GL N G+ D + EM+ R I+ VT L F E +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y T ++ + +++ A + + M P++ + LD L + ++++
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 88 DIM------VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ M +GIG +YN ++ +CN + VD+ + F + G PD +TYN+
Sbjct: 479 EKMQKSRMTLGIG--------IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ L K + E + F +M ++ P
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 6/184 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F EMV R P V+ Y L L ++++AL+ M+
Sbjct: 429 GFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ I+ + +++ W + + + P+++ YN ++G LC +
Sbjct: 487 TLGIGIYNI---IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD TYN++ + + EM + I
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Query: 180 MLLD 183
ML D
Sbjct: 604 MLSD 607
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 91/254 (35%), Gaps = 39/254 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V EA MVE + P+ V T + L +V EAL + M
Sbjct: 149 GFCLEGRVSEAVALVDRMVE-MKQRPDLV-TVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + L+ L K +S + L+ M N+ +++ Y+ V+ LC + D+
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEE--RNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G D +TY+ + L + K + EMI P
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP----------- 313
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D F+ I ++ E G+L + + EM+ R I
Sbjct: 314 ----DVVTFSALIDVFVKE--------------------GKLLEAKELYNEMITRGIAPD 349
Query: 241 DVTMQKLKKAFYNE 254
+T L F E
Sbjct: 350 TITYNSLIDGFCKE 363
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 58/158 (36%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ I ++ +V C V D+MV PD +T + + L +V E
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M++ +QP + + L + A++++ + E I ++++ L
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G D EM + I VT L N+ +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 14/252 (5%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + +A F +M+ E F+ N V+ Y T + L + + A++ LR M+ N
Sbjct: 148 GLCVEGKIGDALHLFDKMIGEGFQPN---VVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +++ +D L K T L+ MVG G + P++ Y +++ LCN + +
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS--PDIFTYTSLIHSLCNLCEWKH 262
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V +QM+ PD + ++ + + L K K+ E + MI +P
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPN----VVTYN 318
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+D E + A+++++ ++ NG P S N L+ G + R+ EEM +
Sbjct: 319 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 378
Query: 236 RILIYDVTMQKL 247
++ VT L
Sbjct: 379 ELIPNTVTYNTL 390
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A F EMV + P+ + Y L L + +DEA+ L+ ++G N P ++
Sbjct: 397 GRLQDAIALFHEMVAHGQI-PD-LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + + + ++ + G L PN+ Y ++ LC +D + F
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKG--LRPNVRTYTIMINGLCRRGLLDEANKLFM 512
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M +G PD TYN I + L++NK+ EM+ + + ML D
Sbjct: 513 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 8/215 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM ++ E P V Y T + G+ + +A+ M
Sbjct: 358 GYCKIQRMDKATYLFEEMCQK-ELIPNTV-TYNTLMHXCHVGR-LQDAIALFHEMVAHGQ 414
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K +H + ++ I G N+ P++ +Y V+ +C +++
Sbjct: 415 IPDLATYRILLDYLCK---KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TY ++ L + + E F EM N P T
Sbjct: 472 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 531
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
LL E AI++ +L G + S LLV
Sbjct: 532 GLLQNKEALRAIQLLQEMLARG-FSADVSTTTLLV 565
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 61/158 (38%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + ++ LC + + FD+M+ G P+ +TY + L K +
Sbjct: 137 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 196
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M + QP + + I L + A +++ ++ GI P + L+ L N
Sbjct: 197 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L V +M+N +I+ V + A E +
Sbjct: 257 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 294
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG + E +M + HV + +R ++++AL+F M + C
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVC--NAVINGFVRASKLEDALRFFGNMVSKGC 495
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FPT+ ++ ++ L K + L M+ G+ PN+I Y+ ++ LC +D
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWK--PNMITYSLLMNGLCQGKKLDMA 553
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ Q + G PD +N+I L + KV + + EM + + P + T +
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A +IW++IL+ G P S N+ L GL + R+SD F + ++R +L
Sbjct: 614 FYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 673
Query: 241 DVTMQKLKKA 250
+T L +A
Sbjct: 674 AITWNILVRA 683
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 16/265 (6%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N E + +E PE + Y + L + +++AL L + EN L
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE--EAENGRGDLDT 429
Query: 67 F--SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F S+ ++ L + + D M G PN + NAV+ + +++ RFF
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCK--PNPHVCNAVINGFVRASKLEDALRFF 487
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
MV G FP +TYN + L K ++ E EM+ W+P + + + L
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+ +W LE G P N+++ GL + G++ D + EM R+ + VT
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 245 QKLKKAFYNESRSMRDRFDSLERRW 269
L + FY +RD F+ + W
Sbjct: 608 NTLMEGFYK----VRD-FERASKIW 627
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 7/209 (3%)
Query: 13 KTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
K F + E W E V +Y T + +L + + +ALK M P + +
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 222
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D K D + ++W+ ++ G ++ PN+ YN ++ LC D F + +M
Sbjct: 223 NILIDGFFKKGDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ D TY+ + L + + + EM +N P + T + L A
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGL 216
E +E+W + + G + S N+L+ GL
Sbjct: 342 EECLELWKVMEKEGCRTV-VSYNILIRGL 369
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + R KQ D+A + L M + P + + ++ L K + ++L+D M
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKN 149
G + P++ YN ++ D+ N +++++ +P+ +YN++ L K
Sbjct: 211 PERG--VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K E +H M KNE +T I L + + A ++ + ENG+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 210 NVLLVGLRNLGRLSDVR---RFAEEMLNRRILIYDVTMQKL 247
N +L G GR+ + + E+ R ++ Y++ ++ L
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQV----DEALKFLRVMKGENCFPTLKFFSNA 70
F +++R ++P+ ++A+ + ++ LIR ++ D AL ++ +N P A
Sbjct: 46 FHHILKRL-FDPK-LVAHVSRIVELIRTQKCKCPEDVALTVIKAY-AKNSMP-----DQA 97
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LDI ++++ F P + YN+++ L +N D FF
Sbjct: 98 LDIFQRMHEI--------------FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P+ TYN++ + + K+ + + + M + + P + T I L A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR-----RILIYDVTMQ 245
+++++ + E G+ P A N+L+ G G + + E +L I Y+V +
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 246 KLKKAF-YNESRSMRDRFDSLER 267
L K ++ES + R ER
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNER 286
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ EA + F EM+E+ V Y + L R + + M + C
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+N LD K+ D +L+ M +G P+++ YN ++ +C+
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG--CPPDVVSYNTLIRGMCSKGKPHEA 281
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R +M+ G PD ++YN++ + K+ + F+E+ K+ +P + +T I
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI- 239
L A + A ++ ++ NG P A L++GL RL++ + M+ +
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 240 ---YDVTMQKLKKA 250
Y++ M KL KA
Sbjct: 402 IPEYNLLMYKLCKA 415
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA F M + +V +Y + L RG++VDEA + L M P + + +
Sbjct: 70 EARSVFRGMAA--QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K+ V L+ MV G P+ ++YN ++ D+ +R F++M+
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRG--CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P TYN + + + V++ F +M++ P + +
Sbjct: 186 KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A ++ + G P S N L+ G+ + G+ + +R EM+ +
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L++L K H ++ M+ G +PN Y ++ LC + F M
Sbjct: 24 LEVLAKSGRCDHVYGTYNDMLAAG--CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ 81
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P+ +Y+++ L + +KV E +EMI QP + + ++ L + + A
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++++ ++ G P NVL+ G G + + R EEML + + T L
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 251 F 251
F
Sbjct: 202 F 202
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 81/220 (36%), Gaps = 8/220 (3%)
Query: 22 FEWNPEHV------LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
F+W V L+Y L L + + D M C P + L L
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLC 63
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ M G + PN+ Y+ ++ LC VD ++M+ G P+
Sbjct: 64 QAQRFEEARSVFRGMAAQGCS--PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TY + L K K+ E + F M+ P + I + A ++
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+LE G +P + N LL G G V+ ++ML +
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++VEA++ F EM R P V++Y T + + + EA + LR M
Sbjct: 236 GFCKMGDMVEAHRLFLEM--RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K H ++L+ + G L P+ Y+ ++ LC V
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG--LEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 121 FRFFDQMVFHGAFPDSLT-----------------------------------YNMIFEC 145
F F M+ +G+ PD+ YN++
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 146 LIKNKKVHEVENFFHEMIKNEWQP 169
L K K+ +V FHE+ + + P
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSP 435
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ +L + D+V+ ++ M+ G P++ TY + L + ++ E + F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M P + + I L + + A E+ N +++ G P + LL GL +G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 222 LSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
L + M+ R ++Y+V + K
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G+ A K F EM ER VLAY + L L +G + DEA K M
Sbjct: 229 GWGVVGDSNNAQKVFDEMRER--GCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGV 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P +S + + ND HTV + ++ NL+PN+ YN V+ LC + +V+
Sbjct: 287 DPDADTYSIFIRSSCQEND-LHTV--YRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEE 343
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++ D+M+ G PD+ +YN I + +V+ N M +++ P +
Sbjct: 344 AYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLK 403
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRIL 238
+L+ + A E+W + + G P ++ V++ G + +L + ++ E M++ I
Sbjct: 404 LLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIP 463
Query: 239 IYDVTMQKLK 248
Y T++ L+
Sbjct: 464 PYIATVELLR 473
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G+ A K F EM ER VLAY + L L +G + DEA K M
Sbjct: 229 GWGVVGDSNNAQKVFDEMRER--GCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGV 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P +S + + ND HTV + ++ NL+PN+ YN V+ LC + +V+
Sbjct: 287 DPDADTYSIFIRSSCQEND-LHTV--YRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEE 343
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++ D+M+ G PD+ +YN I + +V+ N M +++ P +
Sbjct: 344 AYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLK 403
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRIL 238
+L+ + A E+W + + G P ++ V++ G + +L + ++ E M++ I
Sbjct: 404 LLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIP 463
Query: 239 IYDVTMQKLK 248
Y T++ L+
Sbjct: 464 PYIATVELLR 473
>gi|238011542|gb|ACR36806.1| unknown [Zea mays]
Length = 369
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G E ++ A + F EMV+ + P++V AY++FL TL+ + EA+++L V+
Sbjct: 222 GSEAAADLRVAREVFDEMVQAIGFYPDNVPAYDSFLTTLVSSDSSTALPEAMEYLNVLSR 281
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P KFF AL + + LWD VG L+P++ MYN ++ L +
Sbjct: 282 HGCSPGEKFFRAALAAHLDARQLRGAMNLWDDFVG-RRGLVPDMEMYNTMIKLQGSLGHA 340
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ + + D M+ +G FPD+ TYN++ + L
Sbjct: 341 ELIVGYLDDMISNGVFPDTNTYNVVLQLL 369
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + G+ +A F M+E + P +LAY L L +G +VDEA M +
Sbjct: 225 GWGEIGDSEKACDLFQAMLE--QGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRV 282
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + +D ++ D M +NL+PN+ YN ++ LC N V+
Sbjct: 283 EPDAFTYSIFIHSYCDADDVQSAFRVLDKMRR--YNLLPNVFTYNCIIKQLCKNEHVEEA 340
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ D+M+ G PD+ +YN I + +V+ M K+ P + +
Sbjct: 341 YQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKL 400
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + E+W +++ P ++ +V++ G + G+L + ++ E M++ I
Sbjct: 401 LIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPP 460
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 461 YVTTVEMLR 469
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 7/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA+ F EMV + LAY + + + + EA K + ++G
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-- 284
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K +++ M G +PN+ YN V+ LC + VD
Sbjct: 285 -PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG--CVPNIKTYNIVMDGLCKHGKVDEA 341
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F + M G PD ++YN+I + L K K E +MI+ P + T +
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A+ I +++ G+ P + N L+ GL RL D EML ++
Sbjct: 402 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 461
Query: 241 DVT 243
T
Sbjct: 462 ACT 464
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 6/223 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + + D+A + L M P F++ +D L K L
Sbjct: 10 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 69
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M N P+ YN ++ LC +VD D+ V G PD +TY+++ + L K
Sbjct: 70 VMAE--RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E EM N P + T I L A + E A E+ ++ +G +P +
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL 247
+++ GL GRL + E ML R ++ Y M+ L
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K +A++ EMV+R P+ V + + + L + + + A L VM NC
Sbjct: 19 GLCKASKTDKASEMLHEMVDR-GVTPDTV-TFNSIMDGLCKAGKFERAHSLLAVMAERNC 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ + L K + L D V GF +P+++ Y+ + LC +D
Sbjct: 77 RPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGF--VPDVVTYSILADGLCKRGRIDEA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M +G P+ +TYN + + L K K + ++ + + P + +
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+++ +L+ G P + L+ GL GR+ + +EM+++
Sbjct: 195 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 254
Query: 241 DVTMQKLKKAFYNESRS 257
+ L + SR+
Sbjct: 255 ALAYVSLVNGYCKSSRT 271
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A K M++R P V+ Y + L R +VDEA + M ++C
Sbjct: 194 GLCKEGRLDKALKMVEGMLKR-GCTPS-VITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + ++ K + + ++ D G P + +YNA++ C +D +
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEI 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G P+ TYN++ + L K+ KV E F M P ++ I
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A +P+ A ++ + +++ GI P + N L+ R D + M+ +
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426
Query: 241 DVTMQKLKKAFYNESR 256
+VT L +R
Sbjct: 427 NVTYNTLISGLSQTNR 442
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-ENCF 61
KEG + EA+ EM R E ++Y T +I L + +Q+D A K R M +
Sbjct: 510 KEGRLDEASSLLSEMDTLRDE------VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
T F+ +D K + L ++MV G + P++I YN V+ LC + VD +
Sbjct: 564 ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCS--PSVITYNMVITCLCKLDKVDKAW 621
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
FD+M G S++Y ++ L + E EM ++ + L C
Sbjct: 622 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKC 674
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ Y V+ LC +D + +MV G S T+N++ + K K++ E
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
M++ P+ + IT L D+ + A E+++ + GI+ S VL+ GL G
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS---------MRDRFDSLE 266
R + + EEM + I D+ +KL A + R M + DSL
Sbjct: 651 RGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLS 705
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P++ YN ++ LC + D +MV G PD++T+N I + L K K
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ M + +P+ T I+ L + A + + + +G +P + ++L GL
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 217 RNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKAFYNE 254
GR+ + +EM ++ Y+ + L KA E
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + A + + EMV R P+ V++Y T + L + A+ + M+ C
Sbjct: 172 GVCNEGKIKVAVELYNEMV-RSGHEPD-VISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K + MVG G + P+ I YN++V LC ++
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG--IPPDAITYNSIVHGLCCLGQLNEA 287
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F +M +G PD +TYN+I + L K++ V++ +F EM+ P + T +
Sbjct: 288 TRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHG 347
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + AI ++ + + G P + N ++ L ++D F EM++R I
Sbjct: 348 LCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPN 407
Query: 241 DVTMQKLKKAFYN 253
VT + F N
Sbjct: 408 AVTYSTILHGFCN 420
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G GN A F +M E+ P +V+ Y T + +L + + V++A+ FL M G
Sbjct: 207 GLCNSGNTNMAVHVFKKM-EQNGCKP-NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + L L +L+ M G P+++ YN ++ L + V++
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK--PDVVTYNIIIDSLYKDRLVNDA 322
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +MV G PD +TY I L +++E F +M + +P + T I
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+E + +++ GI P + + +L G NLG+L + + +EM+ R ++
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 241 DVTMQKLKKAFYNES 255
+T L E
Sbjct: 443 TLTFSILVDGLCQEG 457
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 8/244 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A + EMV+R P + + Y T L Q+DEA + + M G N P F
Sbjct: 389 VNDAMEFLSEMVDR--GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S +D L + + +++ M G PN+ YNA++ C ++ + F+ M
Sbjct: 447 SILVDGLCQEGMVSEARWVFETMTEKGVE--PNIYTYNALMNGYCLRCKMNEARKVFEIM 504
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
V G PD +YN++ ++++ + + +M + P + T + L
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVT 243
A E++ + +G+LP + ++LL GL G L + + + M ++ I++Y +
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624
Query: 244 MQKL 247
++ +
Sbjct: 625 IEGM 628
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A EMV R P + Y + + L Q++EA + + M+ C P + +
Sbjct: 249 VNDAMDFLSEMVGR--GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D L K MV G + P+++ Y ++ LC ++ R F +M
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQG--IPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G PD + YN I + L K++ V++ F EM+ P + +T + + +
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A +++ ++ ++P + ++L+ GL G +S+ R E M + +
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGV 474
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F M E+ P+ V+ Y + +L + + V++A FL M + P +
Sbjct: 282 GQLNEATRLFKRM-EQNGCKPD-VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVV 339
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ L L L ++L+ M G P+++ YN ++ LC + V++ F
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCK--PDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G P+++TY+ I ++ E F EM+ P L + + L
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A ++ + E G+ P + N L+ G ++++ R+ E M+ +
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
N + + NP ++ + FL ++ + KQ + M T
Sbjct: 68 SSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHT 127
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ L +LN V +W M +G + P++I + ++ +CN +
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLG--IQPDVITFTTLINGVCNEGKIKVAVEL 185
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+++MV G PD ++YN + L + + + F +M +N +P + T I L
Sbjct: 186 YNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILI 239
A++ + ++ GI P + N ++ GL LG+L++ R + M ++
Sbjct: 246 DRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVT 305
Query: 240 YDVTMQKLKK 249
Y++ + L K
Sbjct: 306 YNIIIDSLYK 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G +EG V EA F M E+ E N + Y + +++EA K +M G+
Sbjct: 452 GLCQEGMVSEARWVFETMTEKGVEPN---IYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 60 CFPTLKFFSNALDILVK-LNDSTHTVQLWDIMVGIGFN-LMPNLIMYNAVVGLLCNNNDV 117
C P L ++ +IL+ +S + ++ + L PN + YN ++ LC +
Sbjct: 509 CAPDL----HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ F +M G P +TY+++ L K+ + E F M + + +P +
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
I + + E A +++ + +GI P + NV++ GL G LSD
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG-LSD 670
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P+H L+Y L + K++D A+++L M C+P + ++
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L + D+M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCS--PVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PD++TY+ + L + KV E FFHE + +P + + + L + +
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDR 537
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y++ G P E S +L+ GL G + E+ N+ ++
Sbjct: 538 AIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++ V +A K EM +R P+ V+ Y + + + ++DEA+KFL M C P
Sbjct: 251 RDSGVGQAMKLLDEMRDR-GCTPD-VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + +L M+ GF+ P+++ +N ++ LC +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDI 366
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+EI N + G P+ + N ++ GL G+ + +EM + + +T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 487 YSSLVGGLSREGK 499
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KE + A + MV R + P+ ++ Y T L L + +V++A++ L + + C
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCY-PD-IVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L K + ++L D M +L P+ I Y+++VG L VD
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA--KDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF + G P+++T+N I L K ++ +F MI +PT + I
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANV 211
L + A+E+ N + G++ ++ V
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKRSSAEQV 594
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 46/288 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G +A K E++E P+ V+ Y + + +++ AL L M +
Sbjct: 146 GFCRMGKTRKAAKIL-EVLEGSGAVPD-VITYNVMISGYCKAGEINNALSVLDRM---SV 200
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L +++ D M + + P++I Y ++ C ++ V
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDSGVGQA 258
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN------- 173
+ D+M G PD +TYN++ + K ++ E F ++M + QP +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 174 -CATA---------ITMLLDADEPEF------------------AIEIWNYILENGILPL 205
C+T ML P AI+I + ++G P
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
S N LL G ++ + E M++R I+ Y+ + L K
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + EM++R +NP+ ++A+ L L++ K+ +A+K +MK +
Sbjct: 212 GWCRLKNLLEAGRVWNEMIDR-GFNPD-IVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + K ++ +D+MV G P+ +Y ++ +D V
Sbjct: 270 SPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRG--CQPDAALYTCLITGFGRQKKMDMV 327
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + + + +MI++ +PT +
Sbjct: 328 YSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKS 387
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E EIW+ + G P + S V + GL R + ++ EEML +
Sbjct: 388 YFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEK 442
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 19 VERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+E FE PE V+ Y T L L + +V +A M+G P+ ++ +D+ K+
Sbjct: 65 IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 124
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
L +M P + Y +++ LC N VD ++ F++M G PD +
Sbjct: 125 CQFETAYGLLQLMAS--RKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN + L +++HE ++ M++N +QP + I L D + A ++ +
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242
Query: 198 LENGILPLEASANVLLVGL 216
+ G P + VL+ L
Sbjct: 243 AKQGCAPDLVTHTVLVSKL 261
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ L+Y + L R ++D+A + M E P + ++ +D L K + ++ +
Sbjct: 9 NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 68
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M P+++ YN ++G LC N V F M G P +TY + +
Sbjct: 69 ETMP------EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + M + PT + + I L + + A +++ + G P
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182
Query: 208 SANVLLVGLRNLGRLSDVR 226
+ N L+ GL RL + +
Sbjct: 183 TYNTLIHGLCVKQRLHEAK 201
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 8/222 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + +A T EM R + P+ V Y + TL + +++ A++F M P
Sbjct: 22 RTGKIDKACSTIAEMA-REKLVPD-VFTYNVVIDTLCKARRISRAIEFFETMPE----PD 75
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K L+ M G G + P+ + Y ++ + C + +
Sbjct: 76 VVTYNTLLGGLCKNGRVAQACSLFGSMEGAG--ITPSDVTYTTLIDVFCKMCQFETAYGL 133
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M P +Y I L KN+KV + F EM +P + T I L
Sbjct: 134 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 193
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A ++ ++EN P + + L+ GL R+ +
Sbjct: 194 KQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 8/188 (4%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+V + PE V+ Y L R + D A + L+ M P + ++ L
Sbjct: 272 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGD 331
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD---NVFRFFDQMVFHGAF 133
+ + + M+ G P+++ YN +V C N +D + R+ DQ G
Sbjct: 332 WKEGMRAYREFRRMLEQGIE--PDMVAYNVLVDGFCKANRLDMAEKMVRYMDQ---SGLP 386
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+ +TYN + + KV + H M+ QP +T + L + + A
Sbjct: 387 PNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSF 446
Query: 194 WNYILENG 201
N + G
Sbjct: 447 LNLAMSQG 454
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 66/186 (35%), Gaps = 35/186 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A FG M E P V Y T + + Q + A L++M C
Sbjct: 85 GLCKNGRVAQACSLFGSM-EGAGITPSDV-TYTTLIDVFCKMCQFETAYGLLQLMASRKC 142
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
PT+ + + ++ L K QL++ M G
Sbjct: 143 SPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKD 202
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ P+ I + A++ LC + + F F M G PD +T+ ++ L
Sbjct: 203 LLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC 262
Query: 148 KNKKVH 153
+K+
Sbjct: 263 IRRKLR 268
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P++ YN V+ LC + FF+ M PD +TYN + L KN +V +
Sbjct: 40 KLVPDVFTYNVVIDTLCKARRISRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQA 95
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F M P+ + T I + + E A + + P S ++ G
Sbjct: 96 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 155
Query: 216 LRNLGRLSDVRRFAEEM 232
L ++ + EEM
Sbjct: 156 LCKNRKVDQAYQLFEEM 172
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + Y +V LC +D +M PD TYN++ + L K +++ F
Sbjct: 8 PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F M +P + T + L A ++ + GI P + + L+
Sbjct: 68 FETM----PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ EA + F EM+E+ V Y + L R + + M + C
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+N LD K+ D +L+ M +G P+++ YN ++ +C+
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG--CPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R +M+ G PD ++YN++ + K+ + F+E+ K+ +P + +T I
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI- 239
L A + A ++ ++ NG P A L++GL RL++ + M+ +
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 240 ---YDVTMQKLKKA 250
Y++ M KL KA
Sbjct: 402 IPEYNLLMYKLCKA 415
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L++L K H ++ M+G G +PN Y ++ LC + F M
Sbjct: 24 LEVLAKSGRCDHVYGTYNDMLGAG--CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ 81
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P+ +Y+++ L + +KV E +EMI QP + + ++ L + + A
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++++ ++ G P NVL+ G G + + R EEML + + T L
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 251 F 251
F
Sbjct: 202 F 202
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA F M + +V +Y + L RG++VDEA + L M P + + +
Sbjct: 70 EARSVFRGMAA--QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K+ V L+ MV G P+ ++YN ++ D+ +R F++M+
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRG--CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P TYN + + + V++ F +M++ P + +
Sbjct: 186 KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A ++ + G P S N L+ G+ + G+ + +R EM+ +
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 8/220 (3%)
Query: 22 FEWNPEHV------LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
F+W V L+Y L L + + D M G C P + L L
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLC 63
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ M G + PN+ Y+ ++ LC VD ++M+ G P+
Sbjct: 64 QAQRFEEARSVFRGMAAQGCS--PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TY + L K K+ E + F M+ P + I + A ++
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+LE G +P + N LL G G V+ ++ML +
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 39/204 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++VEA++ F EM R P V++Y T + + + EA + LR M
Sbjct: 236 GFCKMGDMVEAHRLFLEM--RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K H ++L+ + G L P+ Y+ ++ LC V
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG--LEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 121 FRFFDQMVFHGAFPDSLT-----------------------------------YNMIFEC 145
F F M+ +G+ PD+ YN++
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 146 LIKNKKVHEVENFFHEMIKNEWQP 169
L K K+ +V FHE+ + + P
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSP 435
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ +L + D+V+ ++ M+ G P++ TY + L + ++ E + F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M P + + I L + + A E+ N +++ G P + LL GL +G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 222 LSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
L + M+ R ++Y+V + K
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 19 VERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+E FE PE V+ Y T L L + +V +A M+G P+ ++ +D+ K+
Sbjct: 90 IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 149
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
L +M P + Y +++ LC N VD ++ F++M G PD +
Sbjct: 150 CQFETAYGLLQLMAS--RKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN + L +++HE ++ M++N +QP + I L D + A ++ +
Sbjct: 208 TYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 267
Query: 198 LENGILPLEASANVLLVGLRNLGRL 222
+ G P + VL+ L L +L
Sbjct: 268 AKQGCAPDLVTHTVLVSKLCILRKL 292
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 8/222 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + +A T EM R + P+ V Y + TL + +++ A++F M P
Sbjct: 47 RTGKIDKACSTIAEMA-REKLVPD-VFTYNVVIDTLCKARRISRAIEFFETMPE----PD 100
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K L+ M G G + P+ + Y ++ + C + +
Sbjct: 101 VVTYNTLLGGLCKNGRVAQACSLFGSMEGAG--ITPSDVTYTTLIDVFCKMCQFETAYGL 158
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M P +Y I L KN+KV + F EM +P + T I L
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A ++ ++ENG P + + L+ GL R+ +
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEA 260
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ L+Y + L R ++D+A + M E P + ++ +D L K + ++ +
Sbjct: 34 NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 93
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M P+++ YN ++G LC N V F M G P +TY + +
Sbjct: 94 ETMP------EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + M + PT + + I L + + A +++ + G P
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207
Query: 208 SANVLLVGLRNLGRLSDVR 226
+ N L+ GL RL + +
Sbjct: 208 TYNTLIHGLCVKQRLHEAK 226
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 8/188 (4%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+V + PE V+ Y L R + D A + L+ M P + ++ L
Sbjct: 297 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD---NVFRFFDQMVFHGAF 133
+ + + M+ G P+++ YN +V C + +D + R+ DQ G
Sbjct: 357 WKEGMRAYREFRRMLEQGIE--PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQ---SGLP 411
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+ +TYN + + KV + H M+ QP +T + L + + A
Sbjct: 412 PNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSF 471
Query: 194 WNYILENG 201
N + G
Sbjct: 472 LNLAMSQG 479
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P++ YN V+ LC + FF+ M PD +TYN + L KN +V +
Sbjct: 65 KLVPDVFTYNVVIDTLCKARRISRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQA 120
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F M P+ + T I + + E A + + P S ++ G
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180
Query: 216 LRNLGRLSDVRRFAEEM 232
L ++ + EEM
Sbjct: 181 LCKNRKVDQAYQLFEEM 197
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + Y +V LC +D +M PD TYN++ + L K +++ F
Sbjct: 33 PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F M +P + T + L A ++ + GI P + + L+
Sbjct: 93 FETM----PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 143
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 14/230 (6%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL---KF 66
EA MVE + P+ + + + L ++ EA + M + C P L
Sbjct: 224 EAKDLLTVMVEN-GFQPDKI-TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN-LIMYNAVVGLLCNNNDVDNVFRFFD 125
+ L IL KL + V+ + P +I+Y + L D R
Sbjct: 282 LVSKLCILRKLRPALSVVR--------NYPACPEAVILYTPIFRELGRRRGFDRAARLLQ 333
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P+ +TY F+ L K+ F M++ +P + + AD
Sbjct: 334 KMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAD 393
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A ++ Y+ ++G+ P + N L+ G++ + M++R
Sbjct: 394 RLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 443
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA K F EMVE+ + P V+ Y + + L K VDEA++++ MKG+
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEK-DCAPT-VVTYTSLINGLCGSKNVDEAMRYVEEMKGKGI 258
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K S ++L+++M+ G PN++ Y ++ LC +
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGLCKEQKIQEA 316
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
D+M G PD+ Y + K E NF EMI P L
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLT 369
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 11/256 (4%)
Query: 8 VVEANK--TFGEMVERFEWNPEHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCF 61
+V ANK ++V R + E+ + E L+++ RG +V LRV MK +C
Sbjct: 61 LVSANKFKAAEDIVARMKI--ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD 118
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC-NNNDVDNV 120
P+ K + L ILV+ N + + M IG L P + N ++ LC N+ VD
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIG--LPPTVASLNVLIKALCRNDGTVDAG 176
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M G PDS TY + L + ++ E + F EM++ + PT + + I
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + A+ + GI P + + L+ GL GR E M+ R
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 241 DVTMQKLKKAFYNESR 256
VT L E +
Sbjct: 297 MVTYTTLITGLCKEQK 312
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 3/209 (1%)
Query: 26 PEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
P V + + L R VD LK M C P + + L +
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+L+ MV + P ++ Y +++ LC + +VD R+ ++M G P+ TY+ + +
Sbjct: 213 KLFTEMVEK--DCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMD 270
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K+ + + F M+ +P + T IT L + + A+E+ + + G+ P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ G + + + F +EM+
Sbjct: 331 DAGLYGKVISGFCAVSKFREAANFLDEMI 359
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F+ P+ Y V+ +L N ++ F+F+ M G P + N++ + L +N +
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174
Query: 155 VE-NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
FHEM K P T I+ L + A +++ ++E P + L+
Sbjct: 175 AGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
GL + + R+ EEM + I T L + RS++
Sbjct: 235 NGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQ 280
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGE 58
GW K G+ +A + F M+E+ HV LAY L L +G VDEA+ FL M +
Sbjct: 222 GWGKIGDSGKARELFDAMLEQ----GCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSK 277
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P +S + N+ + D M NL+PN+ YN ++ LC V+
Sbjct: 278 KVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRC--NLLPNVFTYNCIIKRLCKIKKVE 335
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
++ D+M+ G PD+ +YN I + +V+ M K+ P +
Sbjct: 336 EAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVL 395
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRI 237
+L+ + A E+W + + P ++ +V++ GL + G+L + ++ M++ I
Sbjct: 396 KLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGI 455
Query: 238 LIYDVTMQ 245
YD T++
Sbjct: 456 PPYDTTIE 463
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA---LKFLRVMKG 57
GW + N + EM+E P+ Y T + + + V EA +F+R
Sbjct: 391 GWCRVRNPSRGMRVLEEMIE-MGHTPDS-FTYNTAIDSFCKAGMVTEATELFEFMRTKGS 448
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K ++ + LV+ + + +L M+ G ++P++ Y V+ +C V
Sbjct: 449 TMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSG--VLPDVSTYKQVIEGMCLAGKV 506
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++F ++M G PD +TYN + L +NKK E + MI+ P+
Sbjct: 507 EEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNML 566
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + EP+ A E W+ + + G + V++ GL N ++ D +E++N+ I
Sbjct: 567 ISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINKGI 626
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L +A + S MR ++ ++ RR+ +Q
Sbjct: 627 KLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAMARRFALNQ 672
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN + C + R ++M+ G PDS TYN + K V E
Sbjct: 380 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 439
Query: 159 FHEMIKNEW----QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F E ++ + PT A I L+ +D E ++ ++ +G+LP ++ ++
Sbjct: 440 F-EFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIE 498
Query: 215 GLRNLGRLSDVRRFAEEMLNR 235
G+ G++ + +F EEM N+
Sbjct: 499 GMCLAGKVEEAYKFLEEMGNK 519
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 135 GLCVEGKIGEALHLFDKMIDEGFQPN---VVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +++ +D L K T L+ MVG G + P++ Y ++V LCN + +
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS--PDIFTYTSLVHALCNLCEWKH 249
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V +QMV PD + ++ + + L K KV E MI+ +P + T +
Sbjct: 250 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E + A+++++ ++ G P S L+ G + ++ EEM +
Sbjct: 310 GHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L + +V EA + + +M P + ++ +D ++ V+++D
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+MV GF P++I Y ++ C + +D F++M PD+ TYN + L
Sbjct: 326 MMVRKGF--APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + FHEM+ P + + + L E A+ + I + + P
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 209 ANVLLVGLRNLGRLSDVR----RFAEEMLNRRILIYDVTMQKL-KKAFYNESRSM 258
N+++ G+ G L R + + L+ + Y++ + L K+ NE+ +
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM R EW P+ Y T + L ++ +A+ M
Sbjct: 345 GYCKIHKIDKAMYLFEEMC-RKEWIPD-TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQ 402
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L +S LD L K + H + ++ I NL P++ +YN ++ +C +++
Sbjct: 403 MPDLVTYSILLDSLCK---NCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 459
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P TYN++ L K ++E F EM N+ P T
Sbjct: 460 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 519
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
L +E AI++ +L G + S LLV
Sbjct: 520 GFLQNNETLRAIQLLEEMLARG-FSADVSTTTLLV 553
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K+ ++ H L+D M+ GF PN++ Y ++ LC + R M PD
Sbjct: 141 KIGEALH---LFDKMIDEGFQ--PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 195
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+ Y I + L K+++V E N F +M+ P + + L + E + + N
Sbjct: 196 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 255
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ + ILP + ++ L G++++ + M+ R +
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A F EMV R + P+ ++ Y L +L + ++EA+ L+ ++ N P ++
Sbjct: 385 GRLQDAIALFHEMVARGQM-PD-LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + + + L+ + G L P++ YN ++ LC ++ + F
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKG--LHPSVWTYNIMIHGLCKRGLLNEANKLFM 500
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M + PD TYN I ++N + EM+ + + ML D
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 2/231 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P ++ + L ++ + K L M P + + ++ LN
Sbjct: 53 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 112
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G P+ + ++ LC + FD+M+ G P+ +TY +
Sbjct: 113 VLAKILKLGHQ--PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 170
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K M + QP + + I L + A +++ ++ GI P
Sbjct: 171 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L+ L NL V +M+N +IL V + A E +
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 281
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 2/160 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+AL + + P++ F+ L + K+ + + L M F + PN+
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM--DSFGVPPNVYTL 94
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ C+ N V F +++ G PD T+ + L K+ E + F +MI
Sbjct: 95 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+QP + T I L AI + + + P
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 194
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 13 KTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
+ G ++ E P+H L+Y L + K++D A+++L +M C+P + +
Sbjct: 362 RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L L K V++ + + G + P LI YN V+ L + ++M
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVGKTEYAVELLEEM 479
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G PD +TY+ + L + KV E FH+M +P+ + + L A +
Sbjct: 480 RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 539
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGL 216
AI+ Y++E G P EA+ +L+ G+
Sbjct: 540 SRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 8/249 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+ V +A K EM R + V+ Y + + + ++DEA+KFL M C P +
Sbjct: 256 DSGVGQAMKLLDEM--RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNV 313
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ L + +L M+ G + P+++ +N ++ LC +
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLSDMLRKGCS--PSVVTFNILINFLCRKRLLGRAIDVL 371
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M HG P+SL+YN + + KK+ + M+ P + T +T L
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 431
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIY 240
+ + A+EI N + G P+ + N ++ GL +G+ EEM L I+ Y
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491
Query: 241 DVTMQKLKK 249
++ L +
Sbjct: 492 STLLRGLGR 500
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA K M + P +V+ + L ++ + +A + L M + C
Sbjct: 287 GICKEGRLDEAIKFLNNM-PSYGCKP-NVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + + M G +PN + YN ++ C +D
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG--CVPNSLSYNPLLHGFCQEKKMDRA 402
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV G +PD +TYN + L K+ KV +++ P + T I
Sbjct: 403 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDG 462
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + E+A+E+ + G+ P + + LL GL G++ + + +M +
Sbjct: 463 LTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPS 522
Query: 237 ILIYDVTMQKLKKA 250
+ Y+ M L KA
Sbjct: 523 AVTYNAIMLGLCKA 536
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A L L+R +++E LKFL M + P + ++ + + + ++ +I+
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G +P++I YN ++G C + ++D ++M PD +TYN I L +
Sbjct: 168 ENSG--AVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSG 222
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ E ++ E P + I + A+++ + + + G P + N
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
VL+ G+ GRL + +F M
Sbjct: 283 VLINGICKEGRLDEAIKFLNNM 304
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/232 (17%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + E K M+ ++ + V+A + + R + +A + + +++ P
Sbjct: 118 RNGELEEGLKFLERMI--YQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K + +++ + M ++ P+++ YN ++ LC++ +
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+ + +PD +TY ++ E + V + EM K +P + I +
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ AI+ N + G P + N++L + + GR D R +ML +
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 40 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
+R ++++AL+F M + CFPT+ ++ ++ L K + L M+ G+ P
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWK--P 507
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N+I Y+ ++ LC +D + Q + G PD +N+I L + KV + +
Sbjct: 508 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 567
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM + P + T + + E A +IW++IL+ G+ P S N+ L GL +
Sbjct: 568 SEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSC 627
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R+SD F + ++R +L +T L + +
Sbjct: 628 HRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 16/265 (6%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N E + +E PE + Y + L + +++AL L + EN L
Sbjct: 347 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE--EAENGRGDLDT 404
Query: 67 F--SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F S+ ++ L + + D M G PN + NAV+ + +++ RFF
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCK--PNPYVCNAVINGFVRASKLEDALRFF 462
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
MV G FP +TYN + L K ++ E EM++ W+P + + + L
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+ +W LE G P N+++ GL + G++ D + EM R + VT
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 245 QKLKKAFYNESRSMRDRFDSLERRW 269
L + FY +RD F+ + W
Sbjct: 583 NTLMEGFYK----VRD-FERASKIW 602
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
Query: 13 KTFGEMVERFEW------NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
K F + E W +P+ V +Y T + +L + + +ALK M P +
Sbjct: 138 KQFDKAKELLNWMWGQGFSPD-VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC 196
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ +D K D + ++W+ ++ G ++ PN+ YN ++ LC D F + +
Sbjct: 197 YNILIDGFFKKGDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 255
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M + D TY+ + L + + + EM +N P + T + L A
Sbjct: 256 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGL 216
E +E+W + + G + S N+L+ GL
Sbjct: 316 IEECLELWKVMEKEGCRTV-VSYNILIRGL 344
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 107/277 (38%), Gaps = 42/277 (15%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F M E F P + +Y + L LI + DEA F + P L+ ++
Sbjct: 71 QALDIFQRMHEIFGCQP-GIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ I + +L + M G GF+ P++ Y ++ L N + + + FD+M
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFS--PDVFSYGTLINSLAKNGYMSDALKLFDEMPE 187
Query: 130 HGAFPDSLTYNM----------------IFECLIKNKKVH-------------------- 153
G PD YN+ I+E L+K V+
Sbjct: 188 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFD 247
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E +H M KNE +T I L + + A ++ + ENG+ P N +L
Sbjct: 248 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTML 307
Query: 214 VGLRNLGRLSDVR---RFAEEMLNRRILIYDVTMQKL 247
G GR+ + + E+ R ++ Y++ ++ L
Sbjct: 308 NGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 344
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++G + EA++ EM+ R ++ Y T + L + +V +A K L VM +N
Sbjct: 269 GYCEKGQLDEASRLGEEMLSR--GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNL 326
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + +L + L+ + G L+P+++ YN ++ LC D+D
Sbjct: 327 MPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG--LVPSVVTYNTLIDGLCRMGDLDVA 384
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R D+M+ HG PD T+ ++ K + + F EM+ QP T I
Sbjct: 385 MRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L +P A + +L G P + NV + GL LG L + ++ML
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTV-QLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
M + P LK + L +L + S +++++MV G P ++ YN ++ C
Sbjct: 145 MVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR--PTVVTYNTMLDSFCK 202
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
V + QM G P+ +TYN++ L + ++ + + EM++ + +
Sbjct: 203 QGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYT 262
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I + + + A + +L G +P + N ++ GL GR+SD R+ + M+
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322
Query: 234 NRRIL 238
N+ ++
Sbjct: 323 NKNLM 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 6/223 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN+ EA F E+ RF V+ Y T + L R +D A++ M
Sbjct: 339 GYTRLGNIGEAFLLFAEL--RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY-NAVVGLLCNNNDVDN 119
P + F+ + KL + +L+D M+ G L P+ Y +VG L D
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG--LQPDRFAYITRIVGEL-KLGDPSK 453
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F ++M+ G PD +TYN+ + L K + E +M+ N P + + I
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 513
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L A A ++ +L GI P + VL+ GRL
Sbjct: 514 AHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 556
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ A + F EM+ R P+ AY T ++ ++ +A M
Sbjct: 409 GFCKLGNLPMAKELFDEMLNR-GLQPDR-FAYITRIVGELKLGDPSKAFGMQEEMLARGF 466
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L KL + +L M+ G L+P+ + Y +++ +
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG--LVPDHVTYTSIIHAHLMAGHLRKA 524
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G FP +TY ++ ++ F EM + P + I
Sbjct: 525 RAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 584
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + A + + + GI P + + +L+ NLG + R ++ML+R I
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644
Query: 241 DVTMQKLKKAFYNESRS 257
T L K + +S
Sbjct: 645 SCTHSALLKHLNKDYKS 661
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFR-FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++P+L N V+ LL + + +V R ++ MV G P +TYN + + K KV E
Sbjct: 149 GMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+M K P + + L + E E A E+ +L G+ + + L+
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268
Query: 215 GLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
G G+L + R EEML+R ++ Y+ M L K
Sbjct: 269 GYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 80/228 (35%), Gaps = 37/228 (16%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R +D A + VM PT+ ++ LD K +QL M +G +PN
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMG--CLPN 224
Query: 101 LIMYNAVVGLL-----------------------------------CNNNDVDNVFRFFD 125
+ YN +V L C +D R +
Sbjct: 225 DVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGE 284
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ GA P +TYN I L K +V + M+ P ++ T I
Sbjct: 285 EMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 344
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A ++ + G++P + N L+ GL +G L R +EM+
Sbjct: 345 NIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 124 FDQMVFHGAFPDSLTYNMIFECLI-KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +MV G PD N + L ++ + ++ M++ +PT + T +
Sbjct: 142 FYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFC 201
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ + A+++ + + G LP + + NVL+ GL + G L + +EML + +
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAY 261
Query: 243 TMQKLKKAF 251
T L + +
Sbjct: 262 TYDPLIRGY 270
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + +M+ R +++P V Y T + TL + QV+EA + RV+ +
Sbjct: 360 GLCKLGEVEEAVEILNQMILR-DFSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGI 417
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM--------------- 98
P + F++ + L N+ ++L++ M G +N++
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 99 -----------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
N++ YN ++ C N ++ FD+M G + +TYN + + L
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
KN++V E +M+ +P + +T A + + A +I + NG P
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSV 597
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ L++GL GR+ R + + +++ T + KA + E R+
Sbjct: 598 TYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRT 647
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EGN+ A + +MV P + + + +++E L F+ M E
Sbjct: 255 GFIEEGNMNGALRIREQMVA--AGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGF 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F++ ++ L ++ H +++ D+M+ GF+ P++ YN+++ LC +V+
Sbjct: 313 RPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD--PDIFTYNSLIFGLCKLGEVEEA 370
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QM+ P+++TYN + L K +V E + P + I
Sbjct: 371 VEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 430
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + A+E++ + G P E + N+L+ L + GRL + +EM +R
Sbjct: 431 LCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRN 490
Query: 237 ILIYDV 242
++ Y+
Sbjct: 491 VVTYNT 496
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L +++EAL L+ M+ C + ++ +D K +++D M
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + N++ YN ++ LC N V+ + DQM+ G PD TYN + +
Sbjct: 518 ELQGISR--NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + M N +P + T I L A E A + + G++ + N
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
++ L R S+ R EM+ +
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEK 660
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 3/212 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + + K+++EA + M+ + + ++ +D L K QL
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLM 549
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ G L P+ YN+++ C D+ M +G PDS+TY + L
Sbjct: 550 DQMLMEG--LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V + P I L A+ ++ ++E G P
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667
Query: 208 SANVLLVGL-RNLGRLSDVRRFAEEMLNRRIL 238
+ V+ GL G + + F EM ++ L
Sbjct: 668 TYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFL 699
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 2/209 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V+ YE L L + + L+ MK C F ++ K V
Sbjct: 103 PSSVI-YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA 161
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ DIM F L + YN ++ +L + N + V +MV G PD T+N++ +
Sbjct: 162 VVDIMEE-EFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + ++ EM P T + ++ A+ I ++ G
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ NVL+ G GR+ +V F +EM N
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSN 309
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN+ +A K F E+ +R P V+++ T + + +DE + M+ P
Sbjct: 252 KEGNISDAQKVFDEITKR-SLQPT-VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K N L+D M G L+PN +++ ++ N ++D +
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRG--LIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ G PD + YN + KN + N MI+ +P + T I
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+EI + +NGI + L+ G+ GR+ D R EML I DVT
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 244 MQKLKKAF 251
+ AF
Sbjct: 488 YTMMMDAF 495
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 98/226 (43%), Gaps = 3/226 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A+ F +VE P + +IT + +A++ R+ + ++ N
Sbjct: 152 SASSVFISLVE-MRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN 210
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
LD ++KLN + + ++ GF L N+ ++N ++ C ++ + + FD++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPL--NVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P +++N + K + E H+M K+ +P + I L ++ +
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A +++ + + G++P + L+ G G + ++ ++ML++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V++A + EM+ R P+ V Y + + K L+ M+ +
Sbjct: 459 GMCKEGRVIDAERALREML-RAGIKPDDV-TYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L+ L KL + L D M+ IG ++P+ I YN LL ++ N
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG--VVPDDITYNT---LLEGHHRHANS 571
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
+ + Q G D +Y I L + K H
Sbjct: 572 SKRYIQKPEIGIVADLASYKSIVNELDRASKDH 604
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + GN+ EA + FGEM + +V Y + L R Q+ A M C
Sbjct: 224 GWCRAGNISEAERVFGEM--KMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N + + VK + +Q+++ M +G P+ I YN ++ C +++++
Sbjct: 282 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG--CPPDAITYNFLIESHCRDDNLEEA 339
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + V G ++ ++N IF C+ K V+ F +M + +P + + M
Sbjct: 340 VKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 398
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
D + +++ + EN I P + VL+ +G ++ F +EM+ + L
Sbjct: 399 FADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRP 458
Query: 239 ---IYDVTMQKLKKA 250
+Y++ +Q+L+KA
Sbjct: 459 SLPVYEMVLQQLRKA 473
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 6/195 (3%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+E F +PE Y + + EA+ M+ C P FS + L K
Sbjct: 139 LEEFGHSPE---PYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKR 195
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ +D + P++++Y ++V C ++ R F +M G P+ T
Sbjct: 196 RAIEAQSFFD---SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYT 252
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
Y+++ + L ++ ++ + F EMI P + + + + A E ++++N +
Sbjct: 253 YSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 312
Query: 199 ENGILPLEASANVLL 213
G P + N L+
Sbjct: 313 RLGCPPDAITYNFLI 327
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA---LKFLRVMKG 57
GW + N + EM+E P+ Y T + + + V EA +F+R
Sbjct: 418 GWCRVRNPSRGMRVLEEMIE-MGHTPDS-FTYNTAIDSFCKAGMVTEATELFEFMRTKGS 475
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K ++ + LV+ + + +L M+ G ++P++ Y V+ +C V
Sbjct: 476 TMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSG--VLPDVSTYKQVIEGMCLAGKV 533
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++F ++M G PD +TYN + L +NKK E + MI+ P+
Sbjct: 534 EEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNML 593
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + EP+ A E W+ + + G + V++ GL N ++ D +E++N+ I
Sbjct: 594 ISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGI 653
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L +A + S MR ++ ++ RR+ +Q
Sbjct: 654 KLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAMARRFALNQ 699
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN + C + R ++M+ G PDS TYN + K V E
Sbjct: 407 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 466
Query: 159 FHEMIKNEW----QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F E ++ + PT A I L+ +D E ++ ++ +G+LP ++ ++
Sbjct: 467 F-EFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIE 525
Query: 215 GLRNLGRLSDVRRFAEEMLNR 235
G+ G++ + +F EEM N+
Sbjct: 526 GMCLAGKVEEAYKFLEEMGNK 546
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++VEA EM +R P+ V+ Y + LI+ Q+DEA + L+ M+ E C
Sbjct: 263 GFGKVGDLVEAYNLLDEM-KRNGCKPD-VVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L K +L+D M G N P+++ Y+ ++ L V++
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN--PDVVTYSTLITALGKAARVESA 378
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G PD TY I L K +V + + F EM P + +
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L + A +I+ + E+G+LP A+ + LL+GL + D +E++ +
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 8/256 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA F EM ER Y + + L + + +A++ L M+ C P
Sbjct: 126 KAGRLSEAFTLFAEMRER--GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S+ + L K ++ +L+ M G P+ I + A++ L VD+
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRK--PDSITFTALMDALGKAGRVDDALEL 241
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M G P +TYN + K + E N EM +N +P + + IT L+
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILI 239
A + + A ++ + + G P + N L+ GL G L+D R + M N ++
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361
Query: 240 YDVTMQKLKKAFYNES 255
Y + L KA ES
Sbjct: 362 YSTLITALGKAARVES 377
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA F E ++ +W P+ V++Y + +L R + + AL+ + M+ + C P
Sbjct: 21 KAGQCEEAQLLF-EELKAAKWTPD-VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPN 78
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ +D L K ++L M G +P++ YN ++ L + F
Sbjct: 79 LWTYNTLVDCLGKAGQFDEALRLLAEMRDNG--CVPDVRTYNCLISTLGKAGRLSEAFTL 136
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M G PD+ TYN + L K + + EM ++ P + ++ IT L
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E A +++ + G P + L+ L GR+ D +EM R + VT
Sbjct: 197 DGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVT 256
Query: 244 MQKLKKAF 251
L F
Sbjct: 257 YNALIAGF 264
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A + F M + NP+ V+ Y T + L + +V+ A M+
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSK-GCNPD-VVTYSTLITALGKAARVESACVLFEEMESVGI 390
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + + + +L K +L+ M G G L P++I YNA + L
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG--LSPDVITYNAFLNSLGRGGRFKEA 448
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN---CATA 177
+ F+ M G PD TY+ + L K K+V + E+I+ L C
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+T + DE A E+ + G+ P +S N L+ L GR+S+
Sbjct: 509 LTSWGNVDE---AHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 6/181 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC-FP 62
+ G EA K F +M E V Y+ L+ L + K+VD+A L+ + + C F
Sbjct: 441 RGGRFKEARKIFEDMKESGLL--PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+LKF L+IL + +L G L P YNA++ L V F
Sbjct: 499 SLKF-DECLEILTSWGNVDEAHELLQFANSKG--LWPGASSYNALIDALAKAGRVSEAFN 555
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ + G PD ++Y+ + L + ++ EM K + +P + + + L
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQ 615
Query: 183 D 183
D
Sbjct: 616 D 616
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 4/199 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V +A++ F EM R + V+ Y FL +L RG + EA K MK P
Sbjct: 406 KAGQVDDADRLFSEM--RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPD 463
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L L K + L ++ G + + ++ + +L + +VD
Sbjct: 464 VATYDALLLGLSKTKEVDDACGLLKELIEQGCAF--DSLKFDECLEILTSWGNVDEAHEL 521
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
G +P + +YN + + L K +V E N ++ + +P ++ ++ I+ L
Sbjct: 522 LQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQ 581
Query: 184 ADEPEFAIEIWNYILENGI 202
+ + A E+ + + G+
Sbjct: 582 TGQIDTAFELLEEMSKRGL 600
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 63/161 (39%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ YN+++ L + F+++ PD ++Y+ + L + K
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM +P T + L A + + A+ + + +NG +P + N L+ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
GRLS+ EM R + T L RS +
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQK 167
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 6/232 (2%)
Query: 5 EGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
EG + EA F +M+ E F+ N V+ Y T + L + A++ LR M+ NC P
Sbjct: 148 EGKIGEALHLFDKMIDEGFQPN---VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 204
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ +D L K T L+ MVG G + P++ Y ++V LCN + +V
Sbjct: 205 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS--PDIFTYTSLVHALCNLCEWKHVTTL 262
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+QMV PD + ++ + + L K KV E MI+ +P + T +
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E + A+++++ ++ G P S L+ G + ++ EEM +
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L + +V EA + + +M P + ++ +D ++ V+++D
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+MV GF P++I Y ++ C + +D F++M PD+ TYN + L
Sbjct: 335 MMVRKGF--APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCH 392
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + FHEM+ P + + + L E A+ + I + + P
Sbjct: 393 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452
Query: 209 ANVLLVGLRNLGRLSDVR----RFAEEMLNRRILIYDVTMQKL-KKAFYNESRSM 258
N+++ G+ G L R + + L+ + Y++ + L K+ NE+ +
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM R EW P+ Y T + L ++ +A+ M
Sbjct: 354 GYCKIHKIDKAMYLFEEMC-RKEWIPD-TKTYNTLMYGLCHVGRLQDAIALFHEMVARGQ 411
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L +S LD L K + H + ++ I NL P++ +YN ++ +C +++
Sbjct: 412 MPDLVTYSILLDSLCK---NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P TYN++ L K ++E F EM N+ P T
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 528
Query: 180 MLLDADEPEFAIEIWNYILENG 201
L +E AI++ +L G
Sbjct: 529 GFLQNNETLRAIQLLEEMLARG 550
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K+ ++ H L+D M+ GF PN++ Y ++ LC + R M PD
Sbjct: 150 KIGEALH---LFDKMIDEGFQ--PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 204
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+ Y I + L K+++V E N F +M+ P + + L + E + + N
Sbjct: 205 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ + ILP + ++ L G++++ + M+ R +
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 2/231 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P ++ + L ++ + K L M P + + ++ LN
Sbjct: 62 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 121
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G P+ + ++ LC + FD+M+ G P+ +TY +
Sbjct: 122 VLAKILKLGHQ--PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 179
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K M + QP + + I L + A +++ ++ GI P
Sbjct: 180 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L+ L NL V +M+N +IL V + A E +
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 290
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 2/160 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+AL + + P++ F+ L + K+ + + L M F + PN+
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM--DSFGVPPNVYTL 103
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ C+ N V F +++ G PD T+ + L K+ E + F +MI
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+QP + T I L AI + + + P
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 203
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + GN+ EA + FGEM + +V Y + L R Q+ A M C
Sbjct: 259 GWCRAGNISEAERVFGEM--KMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 316
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N + + VK + +Q+++ M +G P+ I YN ++ C +++++
Sbjct: 317 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG--CPPDAITYNFLIESHCRDDNLEEA 374
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + V G ++ ++N IF C+ K V+ F +M + +P + + M
Sbjct: 375 VKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 433
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
D + +++ + EN I P + VL+ +G ++ F +EM+ + L
Sbjct: 434 FADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRP 493
Query: 239 ---IYDVTMQKLKKA 250
+Y++ +Q+L+KA
Sbjct: 494 SLPVYEMVLQQLRKA 508
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 30 LAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+ ETF I + ++ EA+ M+ C P FS + L K +
Sbjct: 179 IPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF 238
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D + P++++Y ++V C ++ R F +M G P+ TY+++ + L
Sbjct: 239 FD---SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDAL 295
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ ++ + F EMI P + + + + A E ++++N + G P
Sbjct: 296 CRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDA 355
Query: 207 ASANVLL 213
+ N L+
Sbjct: 356 ITYNFLI 362
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 203 KRSGYKQAMKLLDEM--RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPN 260
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L +L M G+ PN++ +N ++ LC V+
Sbjct: 261 TVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP--PNVVTFNMLISFLCRRGLVEPAMEV 318
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
DQ+ +G P+SL+YN I K KK+ F M+ P ++ T +T L
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E + A+E+ + + + G P+ S N ++ GL G+ + EM+ + + +T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438
Query: 244 MQKLKKAFYNESR 256
+ E R
Sbjct: 439 YSTISSGLCREDR 451
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
MV R + +++Y T L L RG +VD A++ L +K + C P L ++ +D L K
Sbjct: 357 MVSRGCY--PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ ++L + MV G L P++I Y+ + LC + ++ R F ++ G P+++
Sbjct: 415 GKTKEALELLNEMVTKG--LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
YN I L K ++ H + F MI N P
Sbjct: 473 LYNAILLGLCKRRETHNAIDLFIYMISNGCMP 504
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A K EM ++ P +V+ + + L R V+ A++ L + C P ++
Sbjct: 279 DAEKLMAEMSQK--GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L K + ++MV G P+++ YN ++ LC +VD Q+
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRG--CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P ++YN + + L K K E +EM+ QP + +T + L D E
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454
Query: 190 AIEIWNYILENGILPLEASANVLLVGL 216
AI + + + GI P N +L+GL
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGL 481
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVM 55
G +EG V +A +E + P H ++Y L L ++ ++A K + M
Sbjct: 235 GICQEGRVDDA-------IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
+ P + F+ + L + +++ D + G PN + YN ++ C
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT--PNSLSYNPILHAFCKQK 345
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+D F + MV G +PD ++YN + L + +V H++ P ++
Sbjct: 346 KMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 405
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
T I L A + + A+E+ N ++ G+ P + + + GL R+ + +R F +
Sbjct: 406 TVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 49/134 (36%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ LC N D M+ G PD +TY ++ E K +
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM P + + + + AIE + +G P S N++L GL
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273
Query: 219 LGRLSDVRRFAEEM 232
R D + EM
Sbjct: 274 AERWEDAEKLMAEM 287
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+AY + Q+D A + + M E P ++ + L + + + + D
Sbjct: 124 VMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLD 180
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G +P+++ Y ++ C + + D+M G PD +TYN++ + +
Sbjct: 181 DMLRRG--CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V + F + + +P ++ + L A+ E A ++ + + G P +
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 209 ANVLL 213
N+L+
Sbjct: 299 FNMLI 303
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 41/289 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A + F +M E+ +P +V+ Y + L + ++D A + M + P
Sbjct: 232 KGGKMENAIELFMKM-EKLGISP-NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 289
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
LK + ++ L+KLN + D M+G GFN PN++++N ++ C +++ +
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGFN--PNVVVFNNLIDGYCKMGNIEGALKI 347
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI----- 178
D M+ P S+T + + K+ ++ EN E++ + P NC + +
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407
Query: 179 --------------------------TMLL-----DADEPEFAIEIWNYILENGILPLEA 207
TML+ D E A E+W +LE G +
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKV 466
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++N L+ GL G+L + R +EML R + + +T L F NE +
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
L +L++ + ++ + RVM C P + F+N ++ L K + ++L+ M +G
Sbjct: 193 LSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLGI 251
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN++ YN ++ LC N +DN F ++M G P+ TY + LIK +V
Sbjct: 252 S--PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 309
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ EMI + P + I E A++I + ++ I P + L+ G
Sbjct: 310 NHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 369
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIY 240
++ EE+L+ + I+
Sbjct: 370 FCKSDQIEHAENALEEILSSGLSIH 394
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 6/243 (2%)
Query: 11 ANKTFG--EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
AN FG +V RFEW L + T R A+ ++ + FP+LK +
Sbjct: 132 ANALFGLTSVVGRFEWTQAFDLLIHVY-STQFRNLGFSCAVDVFYLLARKGTFPSLKTCN 190
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
L LVK N+ +++ +M P++ + V+ LC ++N F +M
Sbjct: 191 FXLSSLVKANEFEKCCEVFRVM---SEGACPDVFSFTNVINALCKGGKMENAIELFMKME 247
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G P+ +TYN I L +N ++ +M QP I L+ + +
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
I + ++ G P N L+ G +G + + + M+++ I VT+ L
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 367
Query: 249 KAF 251
+ F
Sbjct: 368 QGF 370
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V + EM +R P+ + Y L L ++D+A+K K
Sbjct: 509 GFCNEGKVEGCFRLREEMTKR-GIQPD-IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + ++ K N L++ ++ L N I+YN ++ C N +V
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL--NSIVYNIIIKAHCQNGNVAAA 624
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M G P+ TY+ + + V + ++ EM K + P + I
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A W ++ I P + + V++ G LG + +M I+
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744
Query: 241 DVTMQKLKKAF 251
VT L F
Sbjct: 745 VVTYNVLTNGF 755
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 2/204 (0%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
A +F ++M N P+ + + L K +LW ++ G + + NA
Sbjct: 413 SAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP--ASKVTSNA 470
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ LC + R +M+ G D +TYN + KV EM K
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
QP + L + + + AI++W+ +G++ + +++ G R+ DV
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 227 RFAEEMLNRRILIYDVTMQKLKKA 250
E+L++++ + + + KA
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKA 614
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 87/216 (40%), Gaps = 6/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K + + F E++ ++ E N + Y + + V AL+ L MK +
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMELNS---IVYNIIIKAHCQNGNVAAALQLLENMKSKG 635
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P +S+ + + + L D M GF +PN++ Y A++G C +D
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF--VPNVVCYTALIGGYCKLGQMDT 693
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ P+ TY ++ + K + + N +M ++ P +
Sbjct: 694 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 753
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
A++ + A ++ + + G+ E + L+ G
Sbjct: 754 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+QL + M G ++PN Y++++ +CN V++ D+M G P+ + Y +
Sbjct: 624 ALQLLENMKSKG--ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 681
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K ++ E+ + EMI P I E A + + E+GI
Sbjct: 682 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+P + NVL G + + + ++M + + ++T L
Sbjct: 742 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 786
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A+ F EM++R P V Y + + +++D A + L MK C
Sbjct: 514 GFCKISKMELASGMFNEMMDR-GLCPNEV-TYTALISGYCKDEKLDCAARMLERMKRSGC 571
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K N+ + +L +M + + P+++ Y+ V+ LCNN +
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVM--LEEKISPDVVTYSTVINGLCNNGAIPLA 629
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++MV HG P+ TY+ + + L + +V E E F E+ K P + I +
Sbjct: 630 LEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEV 689
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN---------LGRLSDVRRFAEE 231
+ + + + A + ++ G P + +VL+ GL+N L + F ++
Sbjct: 690 CVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQ 749
Query: 232 MLNRRILIYDVTMQKLKKAFYNESRSMRDRFDS-LER--RW 269
++N+ ++ V KL + + SR + D S L R RW
Sbjct: 750 IINKDVI--SVLSSKLAELDFELSRQLYDALLSRLSRSGRW 788
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 38/289 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ A + F M E E + Y T + L +V+EAL F+ M
Sbjct: 272 GYCRNRDLDSAFEIFNRMDE--EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGV 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMV--------------------------GIG 94
PT+ F+ + V L D W I + IG
Sbjct: 330 LPTVHTFTAPI---VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIG 386
Query: 95 F-------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++PN + YNA++ +L N ++D+ F+ M HG P++ +YN +
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYC 446
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ + M+K PT + I D+ + + AI + + NG P E
Sbjct: 447 TIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEW 506
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
S L+ G + ++ EM++R + +VT L + + +
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 2/210 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y + L+ ++D AL +M C P ++ + + D+ + +
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + P L+ YN ++ C++ D D R + M +G PD +Y +
Sbjct: 459 TNM--LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+ F+EM+ P + I+ ++ + A + + +G P
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ NVL+ GL S + ML +I
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSN 69
TF ++ R + + A I +I+ ++ +AL +L + P + F+
Sbjct: 139 TFAKVAMRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRG--PKMGLFTY 196
Query: 70 ALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+L++LN T + D I L PNL++YN+V+ LC + +V + +++
Sbjct: 197 T-TLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVF 255
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G PD+ TY + +N+ + F+ M + +P +T I L ++
Sbjct: 256 KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVN 315
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A++ + + +G+LP + +V L ++GR+ D
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDA 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T LI L + + + E P L +++ ++ L K + + +
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G + P+ Y +++ C N D+D+ F F++M G P++ TY+ + L
Sbjct: 253 KVFKSG--MKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCN 310
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ +V+E +F EM ++ PT I L D E A +I+ + + G P +
Sbjct: 311 SGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYT 370
Query: 209 ANVLLVGLR 217
L+ G R
Sbjct: 371 YTSLISGQR 379
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
L Y ++ L N V + Q++ G P+ L YN + L K+ V + E+
Sbjct: 192 GLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESII 251
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+++ K+ +P + I + + A EI+N + E G P A+ + L+ GL N
Sbjct: 252 NKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNS 311
Query: 220 GRLSDVRRFAEEMLNRRIL 238
GR+++ F EM +L
Sbjct: 312 GRVNEALDFISEMTRHGVL 330
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L+R ++++ALK L M+ PT + +D K ++ V+ ++ M
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++PN++ NA + L + F+ + +G PDS+TYNM+ +C K
Sbjct: 464 KAKG--IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+V E N EMI+N +P + + I L A + A ++++ + + + P + N
Sbjct: 522 QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN 581
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRR 236
LL GL GR+ E M+ ++
Sbjct: 582 TLLSGLGKEGRVQKAIELFESMIXKK 607
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + E + + EM+ R P+ + Y + +L + +D+AL F + + PT
Sbjct: 835 KSGKITELFELYKEMISR-RCKPDAI-TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D L K+ ++L++ M G PN ++N ++ D + +
Sbjct: 893 PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK--PNCAIFNILINGYGKIGDTETACQL 950
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +Y ++ +CL +V E +F+E+ P + I L
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A+ ++N + GI+P + N L++ L G + +R EE+
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G V EA EM+ R P+ V+ + + +L + +VDEA + MK
Sbjct: 517 YSKVGQVDEAVNLLSEMI-RNGCEPD-VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS 574
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K ++L++ M I PN I +N ++ C N++V+
Sbjct: 575 PTVVTYNTLLSGLGKEGRVQKAIELFESM--IXKKCSPNTISFNTLLDCFCKNDEVELAL 632
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ F +M PD LTYN + LIK KV+ FFH++ K P + T + L
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGL 691
Query: 182 LDADEPEFAIEI 193
+ + AI I
Sbjct: 692 VKCGQIGDAISI 703
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 4/223 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA + F M + E ++ Y + L Q++ A + MK P
Sbjct: 274 RAGKIDEAYEIFRRMDD--EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ LD D + W M G+ MP+++ + +V +LC D D F
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGY--MPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD M G P+ TYN + L++ ++ + M QPT T I
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ E A+E + + GI+P + N L L +GRL + +
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 33 ETFLITLIR-----GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++FLI L+R +++ F + K PTL ++ + L++++ +T + W
Sbjct: 752 DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVH---YTEKAW 808
Query: 88 DI---MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
D+ M +G P+ +N ++ + + + +F + +M+ PD++TYN++
Sbjct: 809 DLFKDMKNVG--CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K+ + + +FF++++ ++++PTP I L E A+ ++ + + G P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A N+L+ G +G + + M+N I
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + LI+ EAL+ R M E P+LK +S + L K DS + L M
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ + + +L +D + F +M G PD +TY ++ + L
Sbjct: 254 EDLG--LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAI-------------------------------T 179
++ + F +M N +P + T + T
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 180 MLLD----ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+L+D A + + A ++ + + GILP + N L+ GL GR+ D + + M
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM 428
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 3/231 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V+ Y T L +D +F M+ + P + F+ +D+L K D
Sbjct: 330 PDQVI-YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+D+M G ++PNL YN ++ L +++ + D M G P + TY +
Sbjct: 389 TFDVMRKQG--ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ + + F +M P + C ++ L + A ++N + ENG+ P
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N+++ +G++ + EM+ + + L + Y R
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 4/215 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G +A +TF +M + + +++A L +L ++ EA ++
Sbjct: 447 FGKSGETGKAVETFEKM--KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P ++ + K+ V L M+ G P++I+ N+++ L VD +
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE--PDVIVVNSLIDSLYKAGRVDEAW 562
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ FD+M P +TYN + L K +V + F MI + P ++ T +
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
DE E A+++++ + P + N ++ GL
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+ A + F MV E + +Y + L +VDEAL + +K
Sbjct: 937 GYGKIGDTETACQLFKRMVN--EGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L K + L++ M G ++P+L YN+++ L V+
Sbjct: 995 DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG--IVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
R ++++ G PD TYN LI+ + E + + KN
Sbjct: 1053 KRMYEELQLAGLEPDVFTYN----ALIRGYSLSENPEHAYTVYKN 1093
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
GF L N YN ++ LL + + +MV G P TY+ + L K +
Sbjct: 187 GFVL--NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V EM +P I +L A + + A EI+ + + G P + VL+
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304
Query: 214 VGLRNLGRLSDVRRFAEEM 232
L N G+L + + +M
Sbjct: 305 DALCNAGQLENAKELFVKM 323
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + EA + F +M+E+ P+ L Y + R QV++A M+ C
Sbjct: 239 GLCRGAQMKEAFELFEDMIEKDRIVPDQ-LTYNLLIGGFCRLGQVEKAQSIFGFMRKNEC 297
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ K + +++ M+ G + P+ + Y ++VG LC + +VD
Sbjct: 298 EPNAFNYATLINGHCKKGEVEAARGVFEEMIRSG--VQPDAVSYTSLVGCLCRHGNVDEG 355
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
+M G D +TYN++ E L K++++ E ++ Q LN A+
Sbjct: 356 INLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQ---LNVASYRIV 412
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E E A + +L G +P A++N+LL+GL ++GR+SD
Sbjct: 413 MNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDA 460
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + VK D Q++D M + ++ P+L+ Y+ ++G LC +
Sbjct: 190 PNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 121 FRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F F+ M+ PD LTYN++ + +V + ++ F M KNE +P N AT I
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLIN 309
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
E E A ++ ++ +G+ P S L+ L G + + +EM +
Sbjct: 310 GHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKA 369
Query: 237 -ILIYDVTMQKLKK 249
++ Y++ ++ L K
Sbjct: 370 DVVTYNLLLEGLCK 383
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 4/201 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V A F EM+ R P+ V +Y + + L R VDE + ++ M + C
Sbjct: 310 GHCKKGEVEAARGVFEEMI-RSGVQPDAV-SYTSLVGCLCRHGNVDEGINLVQEMWQKGC 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L+ L K V L + + G L N+ Y V+ LC+ +++
Sbjct: 368 KADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQL--NVASYRIVMNCLCSCGEMEKA 425
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P NM+ L +V + + ++ + P A I
Sbjct: 426 AGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Query: 181 LLDADEPEFAIEIWNYILENG 201
+ + +IE+ + ++ G
Sbjct: 486 VFRERKLRRSIELLDVLIAEG 506
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 88/216 (40%), Gaps = 5/216 (2%)
Query: 21 RFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF---PTLKFFSNALDILVK 76
R ++ P+ + Y + ++ + A + M+ NC P+L +S + L +
Sbjct: 183 RSKYLPQPNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCR 242
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+L++ M+ ++P+ + YN ++G C V+ F M + P++
Sbjct: 243 GAQMKEAFELFEDMIEKD-RIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNA 301
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
Y + K +V F EMI++ QP ++ + + L + I +
Sbjct: 302 FNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQE 361
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + G + N+LL GL R+++ E++
Sbjct: 362 MWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKL 397
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + EA + F +M+E+ P+ L Y + R QV++A M+ C
Sbjct: 239 GLCRGAQMKEAFELFEDMIEKDRIVPDQ-LTYNLLIGGFCRLGQVEKAQSIFGFMRKNEC 297
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ K + +++ M+ G + P+ + Y ++VG LC + +VD
Sbjct: 298 EPNAFNYATLINGHCKKGEVEAARGVFEEMIRSG--VQPDAVSYTSLVGCLCRHGNVDEG 355
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
+M G D +TYN++ E L K++++ E ++ Q LN A+
Sbjct: 356 INLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQ---LNVASYRIV 412
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E E A + +L G +P A++N+LL+GL ++GR+SD
Sbjct: 413 MNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDA 460
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 75 VKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
VK D Q++D M + ++ P+L+ Y+ ++G LC + F F+ M+
Sbjct: 203 VKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRI 262
Query: 134 -PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD LTYN++ + +V + ++ F M KNE +P N AT I E E A
Sbjct: 263 VPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARG 322
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLK 248
++ ++ +G+ P S L+ L G + + +EM + ++ Y++ ++ L
Sbjct: 323 VFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLC 382
Query: 249 K 249
K
Sbjct: 383 K 383
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 4/201 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V A F EM+ R P+ V +Y + + L R VDE + ++ M + C
Sbjct: 310 GHCKKGEVEAARGVFEEMI-RSGVQPDAV-SYTSLVGCLCRHGNVDEGINLVQEMWQKGC 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L+ L K V L + + G L N+ Y V+ LC+ +++
Sbjct: 368 KADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQL--NVASYRIVMNCLCSCGEMEKA 425
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P NM+ L +V + + ++ + P A I
Sbjct: 426 AGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Query: 181 LLDADEPEFAIEIWNYILENG 201
+ + +IE+ + ++ G
Sbjct: 486 VFRERKLRRSIELLDVLIAEG 506
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 88/216 (40%), Gaps = 5/216 (2%)
Query: 21 RFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF---PTLKFFSNALDILVK 76
R ++ P+ + Y + ++ + A + M+ NC P+L +S + L +
Sbjct: 183 RSKYLPQPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCR 242
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+L++ M+ ++P+ + YN ++G C V+ F M + P++
Sbjct: 243 GAQMKEAFELFEDMIEKD-RIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNA 301
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
Y + K +V F EMI++ QP ++ + + L + I +
Sbjct: 302 FNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQE 361
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + G + N+LL GL R+++ E++
Sbjct: 362 MWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKL 397
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 115/299 (38%), Gaps = 44/299 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN- 59
G K G + EA + EM + +++ Y +FL L + EA + +R ++ +
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175
Query: 60 -CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P FS +D L K ++D M+ G+ +PN+I YNA+V LC + ++
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY--VPNVITYNALVNGLCKADKME 233
Query: 119 NVFRFFDQMVFHGAFPDSLTY--------------------------------------- 139
+ MV G PD +TY
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293
Query: 140 -NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
N++ K + F EM+ QP + I L A + E A +I + +
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
G+ P + N L+ GL GR+ + +F EEM++ + +T L A SR+
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 412
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 115/271 (42%), Gaps = 15/271 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC--F 61
K G++ EA + G+M R +V+ Y + L + ++DEA + ++ M ++C
Sbjct: 84 KAGDLEEARRLHGDMSSR--GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 141
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +++ LD L K + + +L + + P+ + ++ ++ LC +D
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD M+ G P+ +TYN + L K K+ M+ P + + +
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261
Query: 182 LDADEPEFAIEIWNYILENG-----ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
A + A+E+ + + G ++P + + N+L+ G G EEM+ +
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 321
Query: 237 ----ILIYDVTMQKLKKAFYNESRSMRDRFD 263
++ + + L KA + + RD D
Sbjct: 322 LQPDVMTFGALIDGLCKA--GQVEAARDILD 350
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN +A+ F EMV + P+ V+ + + L + QV+ A L +M
Sbjct: 300 GACKAGNFEQASALFEEMVAK-NLQPD-VMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K Q + MV G +P+ I Y ++V LC + D+
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG--CVPDSITYGSLVYALCRASRTDDA 415
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G PD++TYN++ + L K+ K + EM+ QP A +
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
L + +E+ +L G+LP + + +L + G+L DV+ +E
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K ++ + F E+VER +P+ V+ Y T + +L + ++EA + M C
Sbjct: 46 GLCKSNDLGAGMELFEELVERGH-HPD-VVTYNTLIDSLCKAGDLEEARRLHGDMSSRGC 103
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L K+ +L M +++PN+I YN+ + LC +
Sbjct: 104 VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA 163
Query: 121 FRFFDQMVFHGAF---PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + G+ PD++T++ + + L K ++ E + F +MI + P +
Sbjct: 164 CELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 222
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ L AD+ E A + +++ G+ P + +VL+ R+ + M +R
Sbjct: 223 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 280
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 3/213 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V + + + ++A M +N P + F +D L K
Sbjct: 289 PDKV-TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 347
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D+M +G + PN++ YNA+V LC + ++ +F ++MV G PDS+TY +
Sbjct: 348 ILDLMGNLG--VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + + + E+ W P + + L + + E AI + ++ G P
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ GL G L+ +L + +L
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGML 498
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 104 YNAVVGLLCNNNDVDNVFRFF-DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN V+ LC D F +M G P +TYN I L K+ + F E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ P + T I L A + E A + + G +P + +VL+ GL +GR+
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 223 SDVRRFAEEMLNRR------ILIYDVTMQKL-KKAFYNES----RSMRD 260
+ R +EM + I+ Y+ + L K++ E+ RS+RD
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 22/273 (8%)
Query: 14 TFGEMVERF----EWNP----------EHVLAYETFLITLIRG-KQVDEALKFLRV---M 55
TFG M+ R ++ P E E +T+ RG +V L +RV M
Sbjct: 52 TFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKM 111
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
+ PT K + DILV+ N + + M G + P ++ N ++ LC N
Sbjct: 112 EDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKG--IPPTVVSLNILIKALCKNE 169
Query: 116 D-VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ V++ FR F +M G PDS TY + L K K+ + + EM + P+ ++
Sbjct: 170 ETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSY 229
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ I L ++ + AIE+ ++ NGI P + + L+ GL G S E M+
Sbjct: 230 TSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVR 289
Query: 235 RRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
RR+L VT L E + R+ + L+R
Sbjct: 290 RRLLPNMVTYSTLINGLCKEGKH-REAVEILDR 321
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 5/230 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGENCFP 62
+E +V A + EM E+ P V++ + L + ++ V+ A + R M C P
Sbjct: 132 EENHVKRAIGFYKEMREK--GIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQP 189
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L KL + +L D M G L P+++ Y +++ LC +N++D
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKG--LSPSVVSYTSLIHGLCQSNNLDEAIE 247
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M+ +G P+ TY+ + + L K+ + M++ P + +T I L
Sbjct: 248 LLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLC 307
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A+EI + + G+ P ++ GL + F +EM
Sbjct: 308 KEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEM 357
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 11/223 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + N+ EA + EM+ +V Y + + L + +A++ L VM
Sbjct: 235 GLCQSNNLDEAIELLEEMI--INGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRL 292
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L K V++ D M G L P+ MY ++ LC +
Sbjct: 293 LPNMVTYSTLINGLCKEGKHREAVEILDRMRLQG--LKPDAGMYGRIISGLCAACNYQEA 350
Query: 121 FRFFDQMVFHGAFPDSLT-------YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
F D+M G P+ + +NM+ + L N + M
Sbjct: 351 ANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGT 410
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ + A I ++ +G +P E NVL+ GL
Sbjct: 411 FDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 19/269 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK---FLRVMKGENC 60
+ G+V+E K +G +P +V+ Y T + + ++ + K L+ M +
Sbjct: 173 RAGDVIEDMKVWG-------VSP-NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + + ++++ M G L PN++ YN ++ LC++ VD
Sbjct: 225 CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG--LRPNVVTYNILINGLCSDGKVDEA 282
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
DQMV P+ +T+N++ KNK V+E N F++M K P + T I
Sbjct: 283 VALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDA 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
E A ++N +++ GI P ++ N L+ GL G + R EM++++
Sbjct: 343 YCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
++ Y++ + L K ESR D +
Sbjct: 403 VVTYNILIDSLCKK--GESRKAVKLLDEM 429
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ NV A + FGEM +R P +V+ Y + L +VDEA+ M +
Sbjct: 237 GFCKDENVSGAMRVFGEM-QRQGLRP-NVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + ++ K + L++ M G + PN + Y ++ C + +++
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD--PNAMTYTTLIDAYCKDGRMEDA 352
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M+ G FP+ TYN + L + V + +EM+ + + I
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDS 412
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E A+++ + + E G+ P + N L+ G G L
Sbjct: 413 LCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN---KKVHEVE 156
N+I +N VV LC ++ + M G P+ +TYN + + K K+++ +
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM+ P + I + A+ ++ + G+ P + N+L+ GL
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273
Query: 217 RNLGRLSDVRRFAEEMLN 234
+ G++ + ++M++
Sbjct: 274 CSDGKVDEAVALRDQMVS 291
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + GN+ EA + FGEM + +V Y + L R Q+ A M C
Sbjct: 1291 GWCRAGNISEAERVFGEM--KMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 1348
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N + + VK + +Q+++ M +G P+ I YN ++ C +++++
Sbjct: 1349 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG--CPPDAITYNFLIESHCRDDNLEEA 1406
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + V G ++ ++N IF C+ K V+ F +M + +P + + M
Sbjct: 1407 VKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 1465
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
D + +++ + EN I P + VL+ +G ++ F +EM+ + L
Sbjct: 1466 FADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRP 1525
Query: 239 ---IYDVTMQKLKKA 250
+Y++ +Q+L+KA
Sbjct: 1526 SLPVYEMVLQQLRKA 1540
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 30 LAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+ ETF I + ++ EA+ M+ C P FS + L K +
Sbjct: 1211 IPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF 1270
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D + P++++Y ++V C ++ R F +M G P+ TY+++ + L
Sbjct: 1271 FD---SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDAL 1327
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ ++ + F EMI P + + + + A E ++++N + G P
Sbjct: 1328 CRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDA 1387
Query: 207 ASANVLL 213
+ N L+
Sbjct: 1388 ITYNFLI 1394
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA F EMV+ + P +V+ Y + L Q++EA + M G N P F+
Sbjct: 229 EAMYFFSEMVD--QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K +++++M G P+ Y+A++ C + +D + FD MV
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVE--PDAYTYSALMDGYCLQSQMDEAQKLFDIMVG 344
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P YN++ K+++++E + EM + P + +T + A P+
Sbjct: 345 KGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQV 404
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQ 245
A +++ + G+LP + ++LL GL G L + R + M + I IY++ +Q
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464
Query: 246 KLKKAFYNESRSMRDRFDSL 265
+ + + + R+ F +L
Sbjct: 465 GMCN--FGKLEAARELFSNL 482
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 115/295 (38%), Gaps = 38/295 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG ++EA + F EM+ P+ Y + Q+DEA K +M G+
Sbjct: 290 GLCKEGMILEARRVF-EMMTENGVEPD-AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Query: 61 FPTLKFFS-------------NALDILVKLND---STHTVQLWDIMVG------------ 92
P+++ ++ A +L ++ D + TV +M G
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 93 -----IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ L+P+ I Y+ ++ LC + +D FR M P YN++ + +
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ F + QP+ + I+ LL A E++ ++ NG LP
Sbjct: 468 NFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSC 527
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE---SRSMR 259
+ NV + G G S+ R EEM+ R T Q L N+ SR MR
Sbjct: 528 TYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT F L+ L V+L+D + +GF P+LI Y ++ LC N
Sbjct: 139 PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGF--APSLITYTTIIKGLCKIGHTTNAL 196
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M G PD + YN + + L K+++ +E FF EM+ P + ++ +
Sbjct: 197 QLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGF 256
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A ++ ++ ++P + +L+ GL G + + RR E M
Sbjct: 257 CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L+R ++++ALK L M+ PT ++ +D K ++ V+ ++ M
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++PN++ NA + L + F+ + +G PDS+TYNM+ +C K
Sbjct: 464 KAKG--IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+V E N EMI+N +P + + I L A + A ++++ + + + P + N
Sbjct: 522 QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN 581
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRR 236
LL GL GR+ E M+ ++
Sbjct: 582 TLLSGLGKEGRVQKAIELFESMIEKK 607
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + E + + EM+ R P+ + Y + +L + +D+AL F + + PT
Sbjct: 835 KSGKITELFELYKEMISR-RCKPDAI-TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPT 892
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D L K+ ++L++ M G PN ++N ++ D + +
Sbjct: 893 PRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK--PNCAIFNILINGYGKIGDTETACQL 950
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +Y ++ +CL +V E +F+E+ P + I L
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A+ ++N + GI+P + N L++ L G + +R EE+
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G V EA EM+ R P+ V+ + + +L + +VDEA + MK
Sbjct: 517 YSKVGQVDEAVNLLSEMI-RNGCEPD-VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS 574
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K ++L++ M I PN I +N ++ C N++V+
Sbjct: 575 PTVVTYNTLLSGLGKEGRVQKAIELFESM--IEKKCSPNTISFNTLLDCFCKNDEVELAL 632
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ F +M PD LTYN + LIK KV+ FFH++ K P + T + L
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGL 691
Query: 182 LDADEPEFAIEI 193
+ + AI I
Sbjct: 692 VKCGQIGDAISI 703
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 4/223 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA + F M + E ++ Y + L Q++ A + MK P
Sbjct: 274 RAGKIDEAYEIFRRMDD--EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ LD D + W M G+ MP+++ + +V +LC D D F
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGY--MPDVVTFTILVDVLCKARDFDEAFAT 389
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD M G P+ TYN + L++ ++ + M QPT I
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ E A+E + + GI+P + N L L +GRL + +
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 33 ETFLITLIR-----GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++FLI L+R +++ F + K PTL ++ + L++++ +T + W
Sbjct: 752 DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVH---YTEKAW 808
Query: 88 DI---MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
D+ M +G P+ +N ++ + + + +F + +M+ PD++TYN++
Sbjct: 809 DLFKDMKNVG--CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K+ + + +FF++++ ++++PTP I L E A+ ++ + + G P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A N+L+ G +G + + M+N I
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 3/231 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V+ Y T L +D +F M+ + P + F+ +D+L K D
Sbjct: 330 PDQVI-YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+D+M G ++PNL YN ++ L +++ + M G P + TYN+ +
Sbjct: 389 TFDVMRKQG--ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDY 446
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ + + F +M P + C ++ L + A ++N + ENG+ P
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N+++ +G++ + EM+ + + L + Y R
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + LI+ EAL+ R M E P+LK +S + L K DS + L M
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ + + +L +D + F +M G PD +TY ++ + L
Sbjct: 254 EDLG--LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ + F +M N +P + T + D + + E W+ + +G +P
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G +A +TF +M + + +++A L +L ++ EA ++
Sbjct: 447 FGKSGETGKAVETFEKM--KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P ++ + K+ V L M+ G P++I+ N+++ L VD +
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE--PDVIVVNSLIDSLYKAGRVDEAW 562
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ FD+M P +TYN + L K +V + F MI+ + P ++ T +
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
DE E A+++++ + P + N ++ GL
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+ A + F MV E + +Y + L +VDEAL + +K
Sbjct: 937 GYGKIGDTETACQLFKRMVN--EGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L K + L++ M G ++P+L YN+++ L V+
Sbjct: 995 DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG--IVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
R ++++ G PD TYN LI+ + E + + KN
Sbjct: 1053 KRMYEELQLAGLEPDVFTYN----ALIRGYSLSENPEHAYTVYKN 1093
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 2/166 (1%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ + +L++ ++++ MV G L P+L Y+A++ L D + V +
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEG--LKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G P+ T+ + L + K+ E F M P + I L +A +
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E A E++ + NG P + LL + G L + F +M
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
GF L N YN ++ LL + + +MV G P TY+ + L K +
Sbjct: 187 GFVL--NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V EM +P I +L A + + A EI+ + + G P + VL+
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304
Query: 214 VGLRNLGRLSDVRRFAEEM 232
L N G+L + + +M
Sbjct: 305 DALCNAGQLENAKELFVKM 323
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA K F EMVE+ + P V+ Y + + L K VDEA+++L MK +
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEK-DCAPT-VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K S ++L+++M+ G PN++ Y ++ LC +
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGLCKEQKIQEA 316
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN------C 174
D+M G PD+ Y + K E NF EMI P L
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGI 202
+ + L A+ P A ++ + GI
Sbjct: 377 SNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 27 EHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCFPTLKFFSNALDILVKLNDSTH 82
E+ + E L+++ RG +V LRV MK +C P+ K + L ILV+ N
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLC-NNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ + M IG L P + N ++ LC N+ VD + F +M G PDS TY
Sbjct: 140 AFKFYKNMREIG--LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L + ++ E + F EM++ + PT + + I L + + A+ + G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
I P + + L+ GL GR E M+ R VT L E +
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 3/209 (1%)
Query: 26 PEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
P V + + L R VD LK M C P + + L +
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+L+ MV + P ++ Y +++ LC + +VD R+ ++M G P+ TY+ + +
Sbjct: 213 KLFTEMVEK--DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K+ + + F M+ +P + T IT L + + A+E+ + + G+ P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ G + + + F +EM+
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMI 359
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A F EMV+ P V Y + + +++D A L MK C
Sbjct: 504 GFCKISKMESAFGLFNEMVDD-GLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K N+ + +L +M+ G + PN++ Y A++ LC N
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLA 619
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M+ G P+ LTY+ + L + KV E EN F E+ ++ P + I
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ + + E A +++ G P + VL+ GL+N L+D R A
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAA 728
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+ +A M++R + +++ Y T + AL+ L +M+ C
Sbjct: 434 GYCILGDPKKAMLVMNNMLQR--GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + K++ L++ MV G L PN + Y A++ C + +D
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDG--LCPNEVTYTALIDGYCKDEKLDTA 549
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ TYN++ L K E MI+ P + I
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+E++N ++E G LP + + L+ L G++ + E+ ++
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 241 DVTMQKLKKAF 251
++T K+ +A+
Sbjct: 670 EITYVKMIEAY 680
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 37 ITLIRGKQVDEAL----KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
I LI+ EA+ FL ++ L +S L L +L + + + M+
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G + PNL++YNAV+ LC + +V + ++ PD+ TY + + +
Sbjct: 209 EG--VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F++M K +P + +T I L D+ A ++ ++ +GILP +
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 213 LVGLRNLGRLSDVRRFAEEMLNR 235
++ L ++G D R +M N+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNK 349
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 6/255 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GNV +A ++ E E +P+ Y + ++ R +D AL+ M E C P
Sbjct: 227 KDGNVADAETIMKKVFES-EMSPD-TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+S ++ L DS + +D++ I ++P + LC+ ++ +R
Sbjct: 285 TVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P+ TY + L + + FH M ++ P + I +L+
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++A + N + NG P + N ++ G LG ML R V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 243 TMQKLKKAFYNESRS 257
T + K + + +
Sbjct: 462 TYNTIIKGYCDSGNT 476
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++ ++ A + F +M + E + + Y T + L +V+EA +R M
Sbjct: 259 GHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + + L + +L+ M G PN+ Y A++ LC + +
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE--PNVYTYTALISGLCVSGLLKVA 374
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G FP+++TYN + L++N+++ + M +N P + I
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+P+ A+ + N +L+ G + N ++ G + G + R + M
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY LI L R + M E P L ++ ++ L K +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK---DGNVADAET 236
Query: 89 IMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
IM + + M P+ Y +++ C +D+D+ + F+QM G P+++TY+ + L
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +V+E + EMI + PT C I L D E A ++ + G P
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 208 SANVLLVGL 216
+ L+ GL
Sbjct: 357 TYTALISGL 365
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
T+ D++ G + L Y+A++ L V + +M+ G P+ L YN +
Sbjct: 164 TMSFLDMLSQSGLRM--GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L K+ V + E ++ ++E P + I + + A++++N + + G
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + L+ GL + GR+++ EM+ IL
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
GW +A K F EM+ER P+ V AY + L RG V A + L+ M +
Sbjct: 225 GWAVVAKPEKAQKLFDEMIER-GVQPD-VPAYNALIDALCRGGDVALAQEQLKDMQRSRG 282
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + L D+ +++ D M +L PN+ YNAV+ LLC +VD
Sbjct: 283 LAPDAATYGPFLRSACASKDARAALRVLDRMRA--RSLTPNVFTYNAVIRLLCELGEVDE 340
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M +G PD +YN + K K+V++ M + P + +
Sbjct: 341 AYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILK 400
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNRRIL 238
ML+ + AIE+W+ + + G P A+ V++ GL GR + + M++ I
Sbjct: 401 MLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIP 460
Query: 239 IYDVTMQ 245
Y T Q
Sbjct: 461 PYQATCQ 467
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + ++ P + L+Y L + K++D+A+ FL +M C+P + ++ L L +
Sbjct: 322 EQIPKYGCTP-NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 380
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ V+L + G P LI YN V+ L ++MV G PD
Sbjct: 381 SGEVDVAVELLHQLKDKG--CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ I L + ++ + F ++ +P + I L E AI+++ Y
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 498
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++ NG +P E++ +L+ GL G + + R +E+ +R ++
Sbjct: 499 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 205 KRSGYKQAMKLLDEM--RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 262
Query: 64 LKFFSNALDILVKLNDSTHTVQLWD----IMVGIG-FNLMPNLIMYNAVVGLLCNNNDVD 118
++ L L T + W+ +M +G PN++ +N ++ LC V+
Sbjct: 263 TVSYNIVLKGLC-------TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 315
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+Q+ +G P+SL+YN + K KK+ + F M+ P ++ T +
Sbjct: 316 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 375
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
T L + E + A+E+ + + + G P+ S N ++ GL G+ + EM+++ +
Sbjct: 376 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 435
Query: 239 IYDVTMQKLKKAFYNESR 256
+T + E R
Sbjct: 436 PDIITYSTIAAGLCREDR 453
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A + + M + C
Sbjct: 237 GICQEGRVDDAIE-FLKNLPSYGCEPNTV-SYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ + + G PN + YN ++ C +D
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT--PNSLSYNPLLHAFCKQKKMDKA 352
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D MV G +PD ++YN + L ++ +V H++ P ++ T I
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
L A + + A+E+ N ++ G+ P + + + GL R+ D +R F +
Sbjct: 413 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 76/228 (33%), Gaps = 41/228 (17%)
Query: 36 LITLIRGKQVDEALKFL---RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
L +L+R ++DEAL+ + R C +K KL+ S T + ++
Sbjct: 72 LRSLVRRGELDEALRLVGSARRPDAGTCAALIK----------KLSASGRTAEARRVLAA 121
Query: 93 IGFNLM----------------------------PNLIMYNAVVGLLCNNNDVDNVFRFF 124
G ++M P+ YN ++ LC N
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
D+M+ PD +TY ++ E K + EM P + + +
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ AIE + G P S N++L GL R D EM
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 82/209 (39%), Gaps = 12/209 (5%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G EA + P+ V+AY + Q+D A + + M E P
Sbjct: 109 SGRTAEARRVLAA------CGPD-VMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDA 158
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ + L + + + + D M + +P+++ Y ++ C + +
Sbjct: 159 YTYNTLIRGLCGRGRTANALAVLDEM--LRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 216
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
D+M G PD +TYN++ + + +V + F + +P ++ + L A
Sbjct: 217 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 276
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLL 213
+ E A E+ + + G P + N+L+
Sbjct: 277 ERWEDAEELMGEMGQKGCPPNVVTFNMLI 305
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN++EA F + P+ V F+ L++ +V EALK +K +
Sbjct: 498 GHFKAGNLMEALSIF-RHLHALGVLPD-VQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + K + +L D M G + PN+ +YNA+V LC + D+
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG--IAPNIFIYNALVDGLCKSGDIQRA 613
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G PDS+TY+ + + K++ V E + FHEM QP +
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A+ ++ +L+ G S N L+ G ++ + + +EM+ ++I+
Sbjct: 674 CCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732
Query: 241 DVT 243
VT
Sbjct: 733 HVT 735
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G V +A + EM + ++ Y + L + + A K M +
Sbjct: 568 GFCKQGEVEKAFELHDEMC--LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D K + L+ M G + P+ +YNA+V C D++
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG--VQPHSFVYNALVHGCCKEGDMEKA 683
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G F +L++N + + K+ K+ E F EMI + P + T I
Sbjct: 684 MNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 742
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + E A ++ + E ++ + L+ G LG+ S+V E+M+ + +
Sbjct: 743 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 802
Query: 241 DVT 243
+VT
Sbjct: 803 EVT 805
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 6/231 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y L R K+++EA M+ P S +D ++ D +++ D+M
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V G + NLI YN ++ LC ++ M+ G P+S T+ ++ E +
Sbjct: 271 VSCGIPI--NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ EM K P+ ++ I L + A ++ + +G+ P +
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 211 VLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRS 257
L++G + GR+ + RR + M + I Y+ + L KA E S
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 18/266 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
ANK +M F +V+ Y T ++ +++EA + L M P + ++
Sbjct: 368 ANKLLEKMT--FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 425
Query: 71 LDILVKLND----STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ L K ST+ +++ G L P+ + + A + + ++FD+
Sbjct: 426 ISCLSKAGKMEEASTYLLEIQ------GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 479
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ HG P++ Y ++ K + E + F + P C+ I LL
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDV 242
+ A+++++ + E G++P + + L+ G G + +EM + I IY+
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERR 268
+ L K+ + + R FD + +
Sbjct: 600 LVDGLCKS--GDIQRARKLFDGMPEK 623
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 5/232 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K NV EA F EM + P H Y + + +++A+ R M +
Sbjct: 638 GYCKSENVAEAFSLFHEMPSK-GVQP-HSFVYNALVHGCCKEGDMEKAMNLFREML-QKG 694
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F T F+ +D K QL+ M I +MP+ + Y V+ C ++
Sbjct: 695 FATTLSFNTLIDGYCKSCKIQEASQLFQEM--IAKQIMPDHVTYTTVIDWHCKAGKMEEA 752
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M D++TY + K + EV F +M+ +P + I
Sbjct: 753 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 812
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
D A ++ + ++ G+L ++L+ L L++ + +EM
Sbjct: 813 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P++ TY +I L + K+++E + F EM K +P C+ I + + +
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ I + ++ GI + NVL+ GL G++ + M+
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 307
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + ++ P + L+Y L + K++D+A+ FL +M C+P + ++ L L +
Sbjct: 121 EQIPKYGCTP-NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ V+L + G P LI YN V+ L ++MV G PD
Sbjct: 180 SGEVDVAVELLHQLKDKG--CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ I L + ++ + F ++ +P + I L E AI+++ Y
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++ NG +P E++ +L+ GL G + + R +E+ +R ++
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 4 KRSGYKQAMKLLDEM--RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L +L M G PN++ +N ++ LC V+
Sbjct: 62 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP--PNVVTFNMLISFLCRKGLVEPALEV 119
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+Q+ +G P+SL+YN + K KK+ + F M+ P ++ T +T L
Sbjct: 120 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E + A+E+ + + + G P+ S N ++ GL G+ + EM+++ + +T
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239
Query: 244 MQKLKKAFYNESR 256
+ E R
Sbjct: 240 YSTIAAGLCREDR 252
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A + + M + C
Sbjct: 36 GICQEGRVDDAIE-FLKNLPSYGCEPNTV-SYNIVLKGLCTAERWEDAEELMGEMGQKGC 93
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ + + G PN + YN ++ C +D
Sbjct: 94 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT--PNSLSYNPLLHAFCKQKKMDKA 151
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D MV G +PD ++YN + L ++ +V H++ P ++ T I
Sbjct: 152 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 211
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
L A + + A+E+ N ++ G+ P + + + GL R+ D +R F +
Sbjct: 212 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 7/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + +A K G M E P+ + Y + + K +A KFL M +C
Sbjct: 51 GLCRSNQLEKARKLLGRMKE-MGCVPDDAI-YNALISGYSKAKDFGQAFKFLAEMVKNHC 108
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++N +D L K + V+L D M G + PN+ YN +V LC +D
Sbjct: 109 LPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS--PNIYTYNVIVEGLCEERKLDEA 166
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G FPD +TYN + L K +V E F M P ++ T I
Sbjct: 167 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVING 223
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + + + A + +++ G P + + L+ G G + + ML
Sbjct: 224 LCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 277
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 17/252 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +E + EA K EM R + P+ V+ Y +F+ L + +VDEA KFL M
Sbjct: 156 GLCEERKLDEAKKMLEEMAVR-GYFPD-VVTYNSFIKGLCKCDRVDEARKFLARMP---V 210
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ L K D ++ D M G P+++ Y++++ C +V+
Sbjct: 211 TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCT--PDVVTYSSLIDGFCKGGEVERA 268
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ G P+ + YN + L + + + E+ EM + + P ++ I
Sbjct: 269 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV----------GLRNLGRLSDVRRFAE 230
L A+ + A +++ ++E G P +S ++L+V GL GR +
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS 388
Query: 231 EMLNRRILIYDV 242
++L+ +I DV
Sbjct: 389 KVLDEKICEPDV 400
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 3/207 (1%)
Query: 27 EH-VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
EH V Y L+ L R + D+A + M ++C P F+ L L + N +
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L M +G +P+ +YNA++ D F+F +MV + P +TY I +
Sbjct: 64 LLGRMKEMG--CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K ++ + EM P + L + + + A ++ + G P
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N + GL R+ + R+F M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 12/221 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVER--------FEWNPEHVLAYETFLITLIRGKQVDEALK-F 51
G K V +A F MVER + +L Y L L +G + DEA F
Sbjct: 328 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387
Query: 52 LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLL 111
+V+ + C P + F++ LD K +Q+ M+ N++ +N +V L
Sbjct: 388 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN---CCNVVTWNILVHGL 444
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
C ++ + + MV G PD +TY + + + K K F E +K P
Sbjct: 445 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 504
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ + IT L+ + E A ++ ++E +P + + +L
Sbjct: 505 VTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
I + P+ + ++ LC +N ++ + +M G PD YN + K K
Sbjct: 34 IDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDF 93
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ F EM+KN PT + + L A+ A+++ + + + G P + NV+
Sbjct: 94 GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVI 153
Query: 213 LVGLRNLGRLSDVRRFAEEMLNR 235
+ GL +L + ++ EEM R
Sbjct: 154 VEGLCEERKLDEAKKMLEEMAVR 176
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL---KFLRVMKG 57
GW + N K EM+E P++ Y T + T + + EA+ +F+R
Sbjct: 175 GWCRVRNPTRGMKLLEEMIE-LGHRPDN-FTYNTAIDTYCKTGMITEAVDLFEFMRTKGS 232
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K ++ + L + + +L M+ G +P++ Y ++ +C +
Sbjct: 233 TISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSG--CLPDVTTYKEIIEGMCMCGKI 290
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++F ++M PD +TYN + L NKK + + MI+ P+
Sbjct: 291 DEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNML 350
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + D+P+ A E W I G P + V++ GL N ++ D EE++N +
Sbjct: 351 ISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGV 410
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L +A + S M+ ++ + RR+ SQ
Sbjct: 411 KLPYKKFDSFLMQLSVIGDLQAIHRLSEHMKKFYNHGMARRFALSQ 456
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN YN +V C + + ++M+ G PD+ TYN + K + E +
Sbjct: 164 PNAETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDL 223
Query: 159 FHEMIKNEW----QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F E ++ + PT A I L D E ++ +++ +G LP + ++
Sbjct: 224 F-EFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIE 282
Query: 215 GLRNLGRLSDVRRFAEEMLNR 235
G+ G++ + +F EEM N+
Sbjct: 283 GMCMCGKIDEAYKFLEEMGNK 303
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A F EMV+ P V Y + + +++D A L MK C
Sbjct: 504 GFCKISKMESAFGLFNEMVDD-GLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K N+ + +L +M+ G + PN++ Y A++ LC N
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLA 619
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M+ G P+ LTY+ + L + KV E EN F E+ ++ P + I
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ + + E A +++ G P + VL+ GL+N L+D R A
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAA 728
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+ +A M++R + +++ Y T + AL+ L +M+ C
Sbjct: 434 GYCILGDPKKAMLVMNNMLQR--GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + K++ L++ MV G L PN + Y A++ C + +D
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDG--LCPNEVTYTALIDGYCKDEKLDTA 549
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ TYN++ L K E MI+ P + I
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+E++N ++E G LP + + L+ L G++ + E+ ++
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 241 DVTMQKLKKAF 251
++T K+ +A+
Sbjct: 670 EITYVKMIEAY 680
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 37 ITLIRGKQVDEAL----KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
I LI+ EA+ FL ++ L +S L L +L + + + M+
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G + PNL++YNAV+ LC + +V + ++ PD+ TY + + +
Sbjct: 209 EG--VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F++M K +P + +T I L D+ A ++ ++ +GILP +
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 213 LVGLRNLGRLSDVRRFAEEMLNR 235
++ L ++G D R +M N+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNK 349
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 6/255 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GNV +A ++ E E +P+ Y + ++ R +D AL+ M E C P
Sbjct: 227 KDGNVADAETIMKKVFES-EMSPD-TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+S ++ L DS + +D++ I ++P + LC+ ++ +R
Sbjct: 285 TVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P+ TY + L + + FH M ++ P + I +L+
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++A + N + NG P + N ++ G LG ML R V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 243 TMQKLKKAFYNESRS 257
T + K + + +
Sbjct: 462 TYNTIIKGYCDSGNT 476
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++ ++ A + F +M + E + + Y T + L +V+EA +R M
Sbjct: 259 GHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + + L + +L+ M G PN+ Y A++ LC + +
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE--PNVYTYTALISGLCVSGILKVA 374
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G FP+++TYN + L++N+++ + M +N P + I
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+P+ A+ + N +L+ G + N ++ G + G + R + M
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY LI L R + M E P L ++ ++ L K +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK---DGNVADAET 236
Query: 89 IMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
IM + + M P+ Y +++ C +D+D+ + F+QM G P+++TY+ + L
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +V+E + EMI + PT C I L D E A ++ + G P
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 208 SANVLLVGL 216
+ L+ GL
Sbjct: 357 TYTALISGL 365
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
T+ D++ G + L Y+A++ L V + +M+ G P+ L YN +
Sbjct: 164 TMSFLDMLSQSGLRM--GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L K+ V + E ++ ++E P + I + + A++++N + + G
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + L+ GL + GR+++ EM+ IL
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN++EA F + P+ V F+ L++ +V EALK +K +
Sbjct: 587 GHFKAGNLMEALSIF-RRLHALGVLPD-VQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 644
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + K + +L D M G + PN+ +YNA+V LC + D+
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG--IAPNIFIYNALVDGLCKSGDIQRA 702
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G PDS+TY+ + + K++ V E + FHEM QP +
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A+ ++ +L+ G S N L+ G ++ + + +EM+ ++I+
Sbjct: 763 CCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821
Query: 241 DVT 243
VT
Sbjct: 822 HVT 824
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G V +A + EM + ++ Y + L + + A K M +
Sbjct: 657 GFCKQGEVEKAFELHDEMC--LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D K + L+ M G + P+ +YNA+V C D++
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG--VQPHSFVYNALVHGCCKEGDMEKA 772
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G F +L++N + + K+ K+ E F EMI + P + T I
Sbjct: 773 MNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 831
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + E A ++ + E ++ + L+ G LG+ S+V E+M+ + +
Sbjct: 832 HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 891
Query: 241 DVT 243
+VT
Sbjct: 892 EVT 894
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 14/262 (5%)
Query: 8 VVEANKTFGEMVERFEWN---PEHVLAYETFLITLI-----RGKQVDEALKFLRVMKGEN 59
V+E G++ E E E L T+ T+I R K+++EA M+
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P S +D ++ D +++ D+MV G + NLI YN ++ LC ++
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI--NLITYNVLIHGLCKFGKMEK 386
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
MV G P+S T+ ++ E + + EM K P+ ++ I
Sbjct: 387 AAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 446
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
L + A ++ + +G+ P ++L++ + GR+ + RR + M +
Sbjct: 447 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506
Query: 236 RILIYDVTMQKLKKAFYNESRS 257
I Y+ + L KA E S
Sbjct: 507 DIFCYNAIISCLSKAGKMEEAS 528
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 18/266 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
ANK +M F +V+ Y ++ +++EA + L M P + ++
Sbjct: 457 ANKLLEKMT--FSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 514
Query: 71 LDILVKLND----STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ L K ST+ +++ G L P+ + + A + + ++FD+
Sbjct: 515 ISCLSKAGKMEEASTYLLEIQ------GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 568
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ HG P++ Y ++ K + E + F + P C+ I LL
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDV 242
+ A+++++ + E G++P + + L+ G G + +EM + I IY+
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERR 268
+ L K+ + + R FD + +
Sbjct: 689 LVDGLCKS--GDIQRARKLFDGMPEK 712
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L PN +Y+ V+ +C D+D M G P++ TY +I L + K+++E
Sbjct: 258 GLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEA 317
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F EM K +P C+ I + + + + I + ++ GI + NVL+ G
Sbjct: 318 KLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHG 377
Query: 216 LRNLGRLSDVRRFAEEMLN 234
L G++ + M+
Sbjct: 378 LCKFGKMEKAAEILKGMVT 396
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 5/232 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K NV EA F EM + H Y + + +++A+ R M +
Sbjct: 727 GYCKSENVAEAFSLFHEMPSK--GVQPHSFVYNALVHGCCKEGDMEKAMNLFREML-QKG 783
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F T F+ +D K QL+ M I +MP+ + Y V+ C ++
Sbjct: 784 FATTLSFNTLIDGYCKSCKIQEASQLFQEM--IAKQIMPDHVTYTTVIDWHCKAGKMEEA 841
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M D++TY + K + EV F +M+ +P + I
Sbjct: 842 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA 901
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
D A ++ + ++ G+L ++L+ L L++ + +EM
Sbjct: 902 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A F EMV+ P V Y + + +++D A L MK C
Sbjct: 674 GFCKISKMESAFGLFNEMVDD-GLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGC 731
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K N+ + +L +M+ G + PN++ Y A++ LC N
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLA 789
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M+ G P+ LTY+ + L + KV E EN F E+ ++ P + I
Sbjct: 790 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 849
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ + + E A +++ G P + VL+ GL+N L+D R A
Sbjct: 850 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAA 898
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+ +A M++R + +++ Y T + AL+ L +M+ C
Sbjct: 604 GYCILGDPKKAMLVMNNMLQR--GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + K++ L++ MV G L PN + Y A++ C + +D
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDG--LCPNEVTYTALIDGYCKDEKLDTA 719
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ TYN++ L K E MI+ P + I
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+E++N ++E G LP + + L+ L G++ + E+ ++
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839
Query: 241 DVTMQKLKKAF 251
++T K+ +A+
Sbjct: 840 EITYVKMIEAY 850
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 37 ITLIRGKQVDEAL----KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
I LI+ EA+ FL ++ L +S L L +L + + + M+
Sbjct: 319 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 378
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G + PNL++YNAV+ LC + +V + ++ PD+ TY + + +
Sbjct: 379 EG--VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 436
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F++M K +P + +T I L D+ A ++ ++ +GILP +
Sbjct: 437 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 496
Query: 213 LVGLRNLGRLSDVRRFAEEMLNR 235
++ L ++G D R +M N+
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNK 519
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY LI L R + M E P L ++ ++ L K +
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK---DGNVADAET 406
Query: 89 IMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
IM + + M P+ Y +++ C +D+D+ + F+QM G P+++TY+ + L
Sbjct: 407 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 466
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +V+E + EMI + PT C I L D E A ++ + G P
Sbjct: 467 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 526
Query: 208 SANVLLVGL 216
+ L+ GL
Sbjct: 527 TYTALISGL 535
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 101/255 (39%), Gaps = 6/255 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GNV +A ++ E E +P+ Y + ++ R +D AL+ M E C P
Sbjct: 397 KDGNVADAETIMKKVFES-EMSPD-TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+S ++ L DS + +D++ I ++P + LC+ ++ +R
Sbjct: 455 TVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P+ TY + L + + FH M ++ P + I +L+
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++A + N + NG+ + N ++ G LG ML R V
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 631
Query: 243 TMQKLKKAFYNESRS 257
T + K + + +
Sbjct: 632 TYNTIIKGYCDSGNT 646
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
T+ D++ G + L Y+A++ L V + +M+ G P+ L YN +
Sbjct: 334 TMSFLDMLSQSGLRM--GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 391
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L K+ V + E ++ ++E P + I + + A++++N + + G
Sbjct: 392 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + L+ GL + GR+++ EM+ IL
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 487
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A F EMV+ P V Y + + +++D A L MK C
Sbjct: 504 GFCKISKMESAFGLFNEMVDD-GLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K N+ + +L +M+ G + PN++ Y A++ LC N
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLA 619
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M+ G P+ LTY+ + L + KV E EN F E+ ++ P + I
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ + + E A +++ G P + VL+ GL+N L+D R A
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAA 728
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+ +A M++R + +++ Y T + AL+ L +M+ C
Sbjct: 434 GYCILGDPKKAMLVMNNMLQR--GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + K++ L++ MV G L PN + Y A++ C + +D
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDG--LCPNEVTYTALIDGYCKDEKLDTA 549
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ TYN++ L K E MI+ P + I
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+E++N ++E G LP + + L+ L G++ + E+ ++
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 241 DVTMQKLKKAF 251
++T K+ +A+
Sbjct: 670 EITYVKMIEAY 680
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 37 ITLIRGKQVDEAL----KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
I LI+ EA+ FL ++ L +S L L +L + + + M+
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G + PNL++YNAV+ LC + +V + ++ PD+ TY + + +
Sbjct: 209 EG--VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F++M K +P + +T I L D+ A ++ ++ +GILP +
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 213 LVGLRNLGRLSDVRRFAEEMLNR 235
++ L ++G D R +M N+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNK 349
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 6/255 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GNV +A ++ E E +P+ Y + ++ R +D AL+ M E C P
Sbjct: 227 KDGNVADAETIMKKVFES-EMSPD-TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+S ++ L DS + +D++ I ++P + LC+ ++ +R
Sbjct: 285 TVTYSTLIN---GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P+ TY + L + + FH M ++ P + I +L+
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++A + N + NG P + N ++ G LG ML R V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461
Query: 243 TMQKLKKAFYNESRS 257
T + K + + +
Sbjct: 462 TYNTIIKGYCDSGNT 476
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++ ++ A + F +M + E + + Y T + L +V+EA +R M
Sbjct: 259 GHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGI 316
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + + L + +L+ M G PN+ Y A++ LC + +
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE--PNVYTYTALISGLCVSGLLKVA 374
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G FP+++TYN + L++N+++ + M +N P + I
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+P+ A+ + N +L+ G + N ++ G + G + R + M
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY LI L R + M E P L ++ ++ L K +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK---DGNVADAET 236
Query: 89 IMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
IM + + M P+ Y +++ C +D+D+ + F+QM G P+++TY+ + L
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +V+E + EMI + PT C I L D E A ++ + G P
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 208 SANVLLVGL 216
+ L+ GL
Sbjct: 357 TYTALISGL 365
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
T+ D++ G + L Y+A++ L V + +M+ G P+ L YN +
Sbjct: 164 TMSFLDMLSQSGLRM--GLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L K+ V + E ++ ++E P + I + + A++++N + + G
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + L+ GL + GR+++ EM+ IL
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA EM R +P+ +++Y T + L + K++ EA+ L M+ C
Sbjct: 7 GLCRNGGVFEAMGLIREM-GRKSVSPD-IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGC 64
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +D L K ++L + M GF+ ++++Y ++ CNN ++D
Sbjct: 65 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD--ADVVLYGTLISGFCNNGNLDRG 122
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+M+ G + +TY+ + L + + E + M ++ P + I
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+++ N ++E G P + NVLL GL G + D + M+ +
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242
Query: 241 DVTMQKLKKAFYNESR 256
VT L K ++ +
Sbjct: 243 VVTYNTLMKGLCDKGK 258
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ + F EM+ + +V+ Y + L R Q EA L M
Sbjct: 112 GFCNNGNLDRGKELFDEMLGK--GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 169
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K +TH + L ++MV G P+ + YN ++ LC V +
Sbjct: 170 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE--PSNVTYNVLLSGLCKEGLVIDA 227
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE--WQPTPLNCATAI 178
F+ M+ G D +TYN + + L KV E F+ M NE +P I
Sbjct: 228 FKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 287
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L A++I +++ G + N+LL G G++ + +++L+
Sbjct: 288 GGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G V EA K F M + +V + + L + ++ +A+K R M +
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 311
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L ++ L +K ++LW ++ +GF +PN Y+ ++ C ++
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF--VPNSFTYSILIDGFCKMRMLNIA 369
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M HG P YN + L K + + ++ F EM +P ++ T I
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
L A + +F E+ ++E G+ P + + L+ L LG L + + E M+
Sbjct: 430 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 489
Query: 238 -LIYDVTMQKL 247
L+YD ++ L
Sbjct: 490 ALVYDSLLKGL 500
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 10/244 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A K +MV++ +++ Y L ++ ++ EA++ + +
Sbjct: 289 GLCKEGRLTKAVKIHRKMVKKGSCG--NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 346
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D K+ L+ M G N P L YN ++ LC ++
Sbjct: 347 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN--PALFDYNTLMASLCKEGSLEQA 404
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M PD +++N + + +K V+ +M++ +P L +T I
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 464
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM------LN 234
L E + A ++ +G P + LL GL + G +++ +M L+
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524
Query: 235 RRIL 238
R+I+
Sbjct: 525 RKIV 528
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 53/139 (38%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N V+ LC N V +M PD ++YN + L K KK+ E EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
P + C T + L + A+E+ + + G L+ G N G L
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 225 VRRFAEEMLNRRILIYDVT 243
+ +EML + I VT
Sbjct: 122 GKELFDEMLGKGISANVVT 140
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 12/269 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN- 59
G K G + EA + EM + +++ Y +FL L + EA + +R ++ +
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219
Query: 60 -CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P FS +D L K + D M+ G+ +PN++ YNA+V LC + ++
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGY--VPNVVTYNALVNGLCKADKME 275
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ MV G PD +TY+++ + K +V E H M P + + I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-- 236
L +D A +I + ++P + + N+L+ G G EEM+ +
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395
Query: 237 --ILIYDVTMQKLKKAFYNESRSMRDRFD 263
++ + + L KA + + RD D
Sbjct: 396 PDVMTFGALIDGLCKA--GQVEAARDILD 422
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + L + +++ A + M + P + +S +D K + ++L
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 316
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G PN++ +N+++ LC ++ F+ Q+ PD +T+N++
Sbjct: 317 HGMASRGCT--PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGAC 374
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + F EM+ QP + I L A + E A +I + + G+ P
Sbjct: 375 KAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 434
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ NVL+ GL GR+ + F EEM++ + +T L A SR+
Sbjct: 435 TYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 35/268 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + A+ MV++ P+ V+ Y + + +VDEAL+ L M C
Sbjct: 267 GLCKADKMERAHAMIESMVDK-GVTPD-VITYSVLVDAFCKASRVDEALELLHGMASRGC 324
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQL---------------WDIMVG------------- 92
P + F++ +D L K + S Q+ ++I++
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA 384
Query: 93 -----IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ N+ P+++ + A++ LC V+ D M G P+ +TYN++ L
Sbjct: 385 LFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLC 444
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ ++ E F EM+ + P + + + L A + A+++ + + G P
Sbjct: 445 KSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTV 504
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N+L+ GL G+ EEM+ +
Sbjct: 505 TYNILVDGLWKSGKTEQAITVLEEMVGK 532
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 6/242 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC--F 61
K G++ EA + G M R +V+ Y + L + ++DEA + ++ M ++C
Sbjct: 128 KAGDLEEARRLHGGMSSR--GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 185
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +++ LD L K + + +L + + P+ + ++ ++ LC D
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 245
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ G P+ +TYN + L K K+ M+ P + + +
Sbjct: 246 N--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A + A+E+ + + G P + N ++ GL R + + A ++ NR ++
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK 363
Query: 242 VT 243
VT
Sbjct: 364 VT 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN +A+ F EMV + P+ V+ + + L + QV+ A L +M
Sbjct: 372 GACKAGNFEQASALFEEMVAK-NMQPD-VMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K + + MV G +P + Y ++V LC + D+
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG--CVPESMTYGSLVYALCRASRTDDA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G PD++TYN++ + L K+ K + EM+ QP A
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
L + +E+ +L G+LP + + +L
Sbjct: 548 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + + F E+V+R +P+ V+ Y T + +L + ++EA + M C
Sbjct: 90 GLCKSNELGAGMELFEELVKRGH-HPD-VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGC 147
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L K+ +L M +++PN+I YN+ + LC +
Sbjct: 148 VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA 207
Query: 121 FRFFDQMVFHGAF---PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ G+ PD++T++ + + L K + E N +MI + P +
Sbjct: 208 CELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNAL 264
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L AD+ E A + +++ G+ P + +VL+ R+ + M +R
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324
Query: 238 LIYDVTMQKLKKAFYNESRS 257
VT + RS
Sbjct: 325 TPNVVTFNSIIDGLCKSDRS 344
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 84/213 (39%), Gaps = 3/213 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V + + + ++A M +N P + F +D L K
Sbjct: 361 PDKV-TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D+M +G + PN++ YN +V LC + ++ F ++MV G P+S+TY +
Sbjct: 420 ILDLMGNLG--VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA 477
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + + + ++ W P + + L + + E AI + ++ G P
Sbjct: 478 LCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ GL G L+ +L + +L
Sbjct: 538 SFTFAACFGGLHRSGNLAGTMELLRVVLAKGML 570
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 104 YNAVVGLLCNNNDVDNVFRFF-DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN V+ LC + F +M G P +TYN I L K+ ++ F E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+K P + T I L A + E A + + G +P + +VL+ GL +GR+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 223 SDVRRFAEEMLNRR------ILIYDVTMQKL-KKAFYNES----RSMRD 260
+ R +EM + I+ Y+ + L K++ E+ RS+RD
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N++EA + + EM++ + P+ ++ + L L+R K+ +A+KF VMK +
Sbjct: 252 GWCRVKNLMEAGRIWNEMLDE-GFKPD-IVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGP 309
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K V + MV G + P+ +Y ++ N+ +D V
Sbjct: 310 SPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCH--PDAAVYTCLMTGYGNHKRMDMV 367
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G PD TYN + + + + + + +MI+N +P+ + +
Sbjct: 368 YELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKS 427
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E +W+ + + G P + S V + GL + GR + ++ EEM+ +
Sbjct: 428 YFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEK 482
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 5/204 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA FG++ RF N + Y L R K + EA + M E P + +
Sbjct: 227 EAQALFGKLEGRFTPN---LRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNI 283
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L+ L++ + ++ +++M G + P++ Y ++ LC + +F +MV
Sbjct: 284 MLEGLLRSKKRSDAIKFFEVMKAKGPS--PDVRSYTILIRDLCKQTKMKEAVGYFYEMVD 341
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD+ Y + +K++ V EM + P I ++ P+
Sbjct: 342 SGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDD 401
Query: 190 AIEIWNYILENGILPLEASANVLL 213
A+ I+ +++NGI P S N+++
Sbjct: 402 AVRIYKKMIQNGIEPSIHSYNMIM 425
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 33/233 (14%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM- 90
Y + +I L + +Q + + L M GE TL FS A+ + V ++++M
Sbjct: 143 YHSMMIILAKARQFETMMSMLEEM-GEKRLLTLDTFSIAMRAFAAAKERKKAVGIFELMK 201
Query: 91 -----VGIGF--------------------------NLMPNLIMYNAVVGLLCNNNDVDN 119
VG+ PNL Y ++ C ++
Sbjct: 202 NHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWCRVKNLME 261
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +++M+ G PD +T+N++ E L+++KK + FF M P + I
Sbjct: 262 AGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIR 321
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + + A+ + ++++G P A L+ G N R+ V +EM
Sbjct: 322 DLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEM 374
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 41/289 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A + F +M E+ +P +V+ Y + L + ++D A + M + P
Sbjct: 255 KGGKMENAIELFMKM-EKLGISP-NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 312
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
LK + ++ L+KLN + D M+G GFN PN++++N ++ C +++ +
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGFN--PNVVVFNNLIDGYCKMGNIEGALKI 370
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI----- 178
D M+ P S+T + + K+ ++ EN E++ + P NC + +
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430
Query: 179 --------------------------TMLL-----DADEPEFAIEIWNYILENGILPLEA 207
TML+ D E A E+W +LE G +
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE-ATELWFRLLEKGSPASKV 489
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++N L+ GL G+L + R +EML R + + +T L F NE +
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L +L++ + ++ + RVM C P + F+N ++ L K + ++L+ M +G
Sbjct: 215 LLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLG 273
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ PN++ YN ++ LC N +DN F ++M G P+ TY + LIK +
Sbjct: 274 IS--PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDK 331
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
V + EMI + + P + I E A++I + ++ I P + L+
Sbjct: 332 VNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQ 391
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIY 240
G ++ EE+L+ + I+
Sbjct: 392 GFCKSDQIEHAENALEEILSSGLSIH 417
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 6/243 (2%)
Query: 11 ANKTFG--EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
AN FG +V RFEW L + T R A+ ++ + FP+LK +
Sbjct: 155 ANALFGLTSVVGRFEWTQAFDLLIHVY-STQFRNLGFSCAVDVFYLLARKGTFPSLKTCN 213
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
L LVK N+ +++ +M P++ + V+ LC ++N F +M
Sbjct: 214 FLLSSLVKANEFEKCCEVFRVM---SEGACPDVFSFTNVINALCKGGKMENAIELFMKME 270
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G P+ +TYN I L +N ++ +M QP I L+ + +
Sbjct: 271 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 330
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
+ + ++ +G P N L+ G +G + + + M+++ I VT+ L
Sbjct: 331 KVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 390
Query: 249 KAF 251
+ F
Sbjct: 391 QGF 393
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 94/251 (37%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V + EM +R P+ + Y L L ++D+A+K K
Sbjct: 532 GFCNEGKVEGCFRLREEMTKR-GIQPD-IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 589
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + ++ K N L++ ++ L N I+YN ++ C N +V
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL--NSIVYNIIIKAHCQNGNVAAA 647
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M G P+ TY+ + + V + ++ EM K + P + I
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A W ++ I P + + V++ G LG + +M I+
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767
Query: 241 DVTMQKLKKAF 251
VT L F
Sbjct: 768 VVTYNVLTNGF 778
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + A +F ++M N P+ + + L K +LW ++ G
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP-- 485
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+ + NA++ LC + R +M+ G D +TYN + KV
Sbjct: 486 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 545
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM K QP + L + + + AI++W+ +G++ + +++ G
Sbjct: 546 REEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCK 605
Query: 219 LGRLSDVRRFAEEMLNRRI----LIYDVTMQ 245
R+ DV E+L++++ ++Y++ ++
Sbjct: 606 ANRIEDVENLFNELLSKKMELNSIVYNIIIK 636
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 87/216 (40%), Gaps = 6/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K + + F E++ ++ E N + Y + + V AL+ L MK +
Sbjct: 602 GYCKANRIEDVENLFNELLSKKMELNS---IVYNIIIKAHCQNGNVAAALQLLENMKSKG 658
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P +S+ + + + L D M GF +PN++ Y A++G C +D
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF--VPNVVCYTALIGGYCKLGQMDT 716
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ P+ TY ++ + K + + N +M ++ P +
Sbjct: 717 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 776
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
A++ + A ++ + + G+ E + L+ G
Sbjct: 777 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+QL + M G ++PN Y++++ +CN V++ D+M G P+ + Y +
Sbjct: 647 ALQLLENMKSKG--ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 704
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K ++ E+ + EMI P I E A + + E+GI
Sbjct: 705 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 764
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+P + NVL G + + + ++M + + ++T L
Sbjct: 765 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 809
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN++EA F + P+ V F+ L++ +V EALK +K +
Sbjct: 299 GHFKAGNLMEALSIF-RHLHALGVLPD-VQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + K + +L D M G + PN+ +YNA+V LC + D+
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG--IAPNIFIYNALVDGLCKSGDIQRA 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G PDS+TY+ + + K++ V E + FHEM QP +
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A+ ++ +L+ G S N L+ G ++ + + +EM+ ++I+
Sbjct: 475 CCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533
Query: 241 DVT 243
VT
Sbjct: 534 HVT 536
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 6/230 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y L R K+++EA M+ P S +D ++ D +++ D+MV
Sbjct: 13 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G + NLI YN ++ LC ++ M+ G P+S T+ ++ E +
Sbjct: 73 SCGIPI--NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ EM K P+ ++ I L + A ++ + +G+ P +
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRS 257
L++G + GR+ + RR + M + I Y+ + L KA E S
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 18/267 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
ANK +M F +V+ Y T ++ +++EA + L M P + ++
Sbjct: 169 ANKLLEKMT--FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 226
Query: 71 LDILVKLND----STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ L K ST+ +++ G L P+ + + A + + ++FD+
Sbjct: 227 ISCLSKAGKMEEASTYLLEIQ------GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 280
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ HG P++ Y ++ K + E + F + P C+ I LL
Sbjct: 281 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDV 242
+ A+++++ + E G++P + + L+ G G + +EM + I IY+
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERRW 269
+ L K+ + + R FD + +
Sbjct: 401 LVDGLCKS--GDIQRARKLFDGMPEKG 425
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 26/280 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G+ K NV EA F EM + P H Y + + +++A+ R M KG
Sbjct: 439 GYCKSENVAEAFSLFHEMPSK-GVQP-HSFVYNALVHGCCKEGDMEKAMNLFREMLQKG- 495
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND-- 116
F T F+ +D K QL+ M I +MP+ + Y V+ C
Sbjct: 496 --FATTLSFNTLIDGYCKSCKIQEASQLFQEM--IAKQIMPDHVTYTTVIDWHCKAGKME 551
Query: 117 ---------------VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
VD VF F++MV G PD +TY ++ K + E E
Sbjct: 552 EANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
++ IT L ++ A ++ + + E G+ P A+ + L+ G+
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
+ + R E + + ++ T+ L N++ S R
Sbjct: 672 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDAR 711
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 5/162 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ A K F M E+ P+ V Y T + + + V EA M +
Sbjct: 404 GLCKSGDIQRARKLFDGMPEK-GLEPDSV-TYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + K D + L+ M+ GF + +N ++ C + +
Sbjct: 462 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF---ATTLSFNTLIDGYCKSCKIQEA 518
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ F +M+ PD +TY + + K K+ E F EM
Sbjct: 519 SQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 560
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P++ TY +I L + K+++E + F EM K +P C+ I + + +
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+ I + ++ GI + NVL+ GL G++ + M+ T L +
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 251 FYNESRSMR--DRFDSLERR 268
+ E R + D +E+R
Sbjct: 125 YCREHNMGRALELLDEMEKR 144
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
GW + + +A K EM+E PE+ Y + T + VDEA M KG
Sbjct: 175 GWCRVRDPKKAMKLLEEMIEAGH-KPEN-FTYCAAIDTFCQAGMVDEAADLFDFMITKGS 232
Query: 59 N-CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K F+ + L K + + +L M+ G +P++ Y V+ +C V
Sbjct: 233 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG--CLPDVSTYKDVIEGMCMAEKV 290
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++F D+M G PD +TYN L +N+K E + M+++ P+
Sbjct: 291 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 350
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + D+P+ A W + + + + ++ GL + R + EE++N+ +
Sbjct: 351 ISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 410
Query: 238 ----LIYDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
++D + +L KA + S M+ ++ S+ RR+ S+
Sbjct: 411 KLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSE 456
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P+H L+Y L + K++D A+++L M C+P + ++
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L + D+M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCS--PVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PD++TY+ + L + KV E FFHE + +P + + + L + + +
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ +++ G P E S +L+ GL G + E+ N+ ++
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++ V A K EM +R P+ V+ Y + + + ++DEA+KFL M C P
Sbjct: 251 RDSGVGHAMKLLDEMRDR-GCTPD-VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + +L M+ GF+ P+++ +N ++ LC +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDI 366
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+EI N + G P+ + N ++ GL G+ + +EM + + +T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 487 YSSLVGGLSREGK 499
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KE + A + MV R + P+ ++ Y T L L + +V++A++ L + + C
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCY-PD-IVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L K + ++L D M +L P+ I Y+++VG L VD
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA--KDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF + G P+++T+N I L K+++ +F MI +P + I
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANV 211
L + A+E+ N + G++ ++ V
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
++R +++E KFL M P + + + +L + ++ +I+ G G +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG--AV 169
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I YN ++ C +++N D+M PD +TYN I L + K+ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M++ + P + I A+++ + + + G P + NVL+ G+
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 219 LGRLSDVRRFAEEM 232
GRL + +F +M
Sbjct: 287 EGRLDEAIKFLNDM 300
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 112/288 (38%), Gaps = 46/288 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G +A K E++E P+ V+ Y + + +++ AL L M +
Sbjct: 146 GFCRLGKTRKAAKIL-EILEGSGAVPD-VITYNVMISGYCKAGEINNALSVLDRM---SV 200
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L +++ D M + + P++I Y ++ C ++ V +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN------- 173
+ D+M G PD +TYN++ + K ++ E F ++M + QP +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 174 -CATA---------ITMLLDADEPEF------------------AIEIWNYILENGILPL 205
C+T ML P AI+I + ++G P
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
S N LL G ++ + E M++R I+ Y+ + L K
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 3/219 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + ++ +P + L+Y L + K++D+A+ FL +M C+P + ++ L L +
Sbjct: 324 EQIPKYGCSP-NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 382
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ V+L + G P LI YN V+ L ++MV G PD
Sbjct: 383 SGEVDVAVELLHQLKDKG--CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ I L + ++ + F ++ +P + I L E AI+++ Y
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 500
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ NG +P E++ +L+ GL G + + R +E+ +R
Sbjct: 501 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 207 KRSGYKQAMKLLDEM--RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 264
Query: 64 LKFFSNALDILVKLNDSTHTVQLWD----IMVGIG-FNLMPNLIMYNAVVGLLCNNNDVD 118
++ L L T + W+ +M +G PN++ +N ++ LC V+
Sbjct: 265 TVSYNIVLKGLC-------TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 317
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+Q+ +G P+SL+YN + K KK+ + F M+ P ++ T +
Sbjct: 318 PALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 377
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
T L + E + A+E+ + + + G P+ S N ++ GL G+ + EM+++ +
Sbjct: 378 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 437
Query: 239 IYDVTMQKLKKAFYNESR 256
+T + E R
Sbjct: 438 PDIITYSTIAAGLCREDR 455
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A + + M + C
Sbjct: 239 GICQEGRVDDAIE-FLKNLPSYGCEPNTV-SYNIVLKGLCTAERWEDAEELMGEMGQKGC 296
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ + + G + PN + YN ++ C +D
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS--PNSLSYNPLLHAFCKQKKMDKA 354
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D MV G +PD ++YN + L ++ +V H++ P ++ T I
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
L A + + A+E+ N ++ G+ P + + + GL R+ D +R F +
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 77/229 (33%), Gaps = 43/229 (18%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
L +L+R ++DEAL+ + + + ++ KL+ S T + ++ G
Sbjct: 74 LRSLVRRGELDEALRLVGSARRPD-------AGTCAALIKKLSASGRTAEARRVLAACG- 125
Query: 96 NLMPNLIMYNAVVGLLCNNNDVD--------------------------------NVFRF 123
P+++ YNA++ C VD N
Sbjct: 126 ---PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M+ PD +TY ++ E K + EM P + + +
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ AIE + G P S N++L GL R D EM
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 51/116 (43%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P+++ Y ++ C + + D+M G PD +TYN++ + + +V +
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 251
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F + +P ++ + L A+ E A E+ + + G P + N+L+
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA F EM E+ +PE +Y + + ++ D AL+ M C P+
Sbjct: 360 GRVDEALAVFDEMKEK-GMSPEQ-YSYNSLISGFLKADMFDRALELFNHMNA--CGPSPN 415
Query: 66 FFSNALDI--LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ L I K S +Q ++ M G ++P++ NAV+ L + + R
Sbjct: 416 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKG--IVPDVAAANAVLYSLAGSGRLGMAKRV 473
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G PD++TY M+ +C K K E NFF +M+++ P L + I L
Sbjct: 474 FYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYK 533
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A ++++ + E I P + N LL GL G++ +V + EEM
Sbjct: 534 GGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 10/226 (4%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA G+M E P+ V+ + + L ++ +A MK + P +
Sbjct: 259 EAYHILGKM-EDSGCKPD-VVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYIT 316
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
LD DS V++W+ MV G+N N++ Y AVV LC VD FD+M
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYN--DNIVSYTAVVDALCQVGRVDEALAVFDEMKE 374
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADE 186
G P+ +YN + +K F+ M N P+P N T + + + +
Sbjct: 375 KGMSPEQYSYNSLISGFLKADMFDRALELFNHM--NACGPSP-NGYTHVLFINYYGKSGQ 431
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
AI+ + ++ GI+P A+AN +L L GRL +R E+
Sbjct: 432 SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYEL 477
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA T E + + N + ++ + + +++ V+++++F +
Sbjct: 672 KNGLMKEALHTVKEYILKAGCNVDKS-SFHSLMEGILKKAGVEKSIEFAENIASRGILLN 730
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F + L K + QL++ G+G +L YN+++ L + N +D
Sbjct: 731 DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG--SYNSLIRGLVDENLIDIAEDL 788
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M G PD TYN+I + + K+ +V E+ EM + ++ T + T I+ L+
Sbjct: 789 FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVK 848
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ E AI+++ ++ G P + LL GL G++ D EML
Sbjct: 849 SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEML 898
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 13/278 (4%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K EA F +MVE P+ VLA + + TL +G + +EA + +K P
Sbjct: 497 SKASKADEAMNFFSDMVES-GCVPD-VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEP 554
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T ++ L L + +QL + M + PNLI YN V+ L N +V+
Sbjct: 555 TNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP--PNLITYNTVLDCLSKNGEVNCAID 612
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +YN + LIK +++ E F +M K C + +
Sbjct: 613 MLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVK 672
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ E + YIL+ G ++S + L+ G+ + FAE + +R IL+ D
Sbjct: 673 NGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDF 732
Query: 243 -------TMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ K KKA E+ + ++F L KT
Sbjct: 733 FLCPLIRHLCKHKKAL--EAHQLFNKFKGLGVSLKTGS 768
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K++++A+ + E PT + LD L+K L++
Sbjct: 837 VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNE 896
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ + +NV + F++MV G PD +Y ++ + L
Sbjct: 897 MLEYGCE--PNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTA 954
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ +F ++ + +P + I L ++ E A+ ++N + + GI+P +
Sbjct: 955 GRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTY 1014
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1015 NSLILHLGKAGKAAEAAQMYEELLRK 1040
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ ++ +A M C P ++ L+
Sbjct: 863 MSEGFSPTP---CTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA 919
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ + QL++ MV G N P++ Y ++ LC +++ +F Q+ G PD +
Sbjct: 920 GNTENVCQLFEKMVEQGIN--PDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLI 977
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
YN++ + L K++++ E + F+EM K P + I L A + A +++ +
Sbjct: 978 VYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEEL 1037
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1038 LRKGWKPSVFTYNALIRG 1055
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 86/201 (42%), Gaps = 2/201 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EA++ + M + P+++ +S + K D + L + M
Sbjct: 174 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G PN+ Y + +L D + +M G PD +T+ +I + L +
Sbjct: 234 ARGVK--PNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + + F +M ++ +P + T + D+ + + +E+WN ++ +G S
Sbjct: 292 LSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTA 351
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
++ L +GR+ + +EM
Sbjct: 352 VVDALCQVGRVDEALAVFDEM 372
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + V+ + + +M G +TYN I L+K+K++ + +
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 858
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL + + A ++N +LE G P N+LL G R
Sbjct: 859 YYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRI 918
Query: 219 LGRLSDVRRFAEEMLNRRI 237
G +V + E+M+ + I
Sbjct: 919 AGNTENVCQLFEKMVEQGI 937
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +V+A F EM+E + P + Y L + + M +
Sbjct: 880 GLLKSGKMVDAENLFNEMLE-YGCEPNCTI-YNILLNGHRIAGNTENVCQLFEKMVEQGI 937
Query: 61 FPTLKFFSNALDILV---KLNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P +K ++ +D L +LND + QL ++ L P+LI+YN ++ L +
Sbjct: 938 NPDIKSYTILIDTLCTAGRLNDGLCYFRQLHEL------GLEPDLIVYNLLIDGLGKSER 991
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
++ F++M G P+ TYN + L K K E + E+++ W+P+
Sbjct: 992 IEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPS 1045
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 4/212 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA + + MVE + V Y ++ + + VD L L M+ P
Sbjct: 183 KSGFDAEAMEVYKAMVE--DGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN 240
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + +L + + M G P+++ + ++ +LC+ + +
Sbjct: 241 VYSYTICIRVLGQAARFDEAYHILGKMEDSGCK--PDVVTHTVIIQVLCDAGRLSDAKAV 298
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M PD +TY + + + V ++ M+ + + ++ + L
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQ 358
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ A+ +++ + E G+ P + S N L+ G
Sbjct: 359 VGRVDEALAVFDEMKEKGMSPEQYSYNSLISG 390
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + ++++EA+ MK + P L +++ + L K + Q+++
Sbjct: 976 LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ P++ YNA++ + DN + + QM+ G P+S TY
Sbjct: 1036 ELLRKGWK--PSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++G + EA++ EM+ R V+ Y T + L + +V +A K L VM +N
Sbjct: 281 GYCEKGQIEEASRLGEEMLSR--GAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNL 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + +L + L+ + +L P+++ YN ++ LC D+D
Sbjct: 339 MPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY--RSLAPSVVTYNTLIDGLCRLGDLDVA 396
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R D+M+ HG PD T+ K + + F EM+ QP T I
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L +P A + +L G P + NV + GL LG L + ++ML
Sbjct: 457 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 509
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+++ N+ A + + MVE P V+ Y T L + + V EAL+ L M+ C P
Sbjct: 178 DRDNNIDVAREVYNVMVE-CGICPT-VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSP 235
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ ++ L + +L M+ +G + ++ Y+ ++ C ++ R
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV--SVYTYDPLIRGYCEKGQIEEASR 293
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M+ GA P +TYN I L K +V + M+ P ++ T I
Sbjct: 294 LGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYT 353
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A ++ + + P + N L+ GL LG L R +EM+
Sbjct: 354 RLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI 404
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 6/223 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN+ EA F E+ R+ V+ Y T + L R +D A++ M
Sbjct: 351 GYTRLGNIGEAFLLFAEL--RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP 408
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY-NAVVGLLCNNNDVDN 119
P + F+ + K+ + +L+D M+ G L P+ Y +VG L D
Sbjct: 409 DPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG--LQPDRFAYITRIVGEL-KLGDPSK 465
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F ++M+ G PD +TYN+ + L K + E +M+ N P + + I
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 525
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L A A ++ +L GI P + VL+ GRL
Sbjct: 526 AHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 568
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 4/249 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ A + F EM+ R P+ AY T ++ ++ +A M
Sbjct: 421 GFCKMGNLPMAKELFDEMLNR-GLQPDR-FAYITRIVGELKLGDPSKAFGMQEEMLARGF 478
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D L KL + +L M+ G L+P+ + Y +++ +
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG--LVPDHVTYTSIIHAHLMAGHLRKA 536
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G FP +TY ++ ++ F EM + P + I
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + A + + GI P + + +L+ NLG + R ++ML+R I
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656
Query: 241 DVTMQKLKK 249
T + L K
Sbjct: 657 SCTHRSLLK 665
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 2/207 (0%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R +D A + VM PT+ ++ LD K +QL M +G + PN
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCS--PN 236
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ YN +V L ++ +++ M+ G TY+ + + ++ E
Sbjct: 237 DVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGE 296
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM+ PT + T + L A ++ + ++ ++P S N L+ G LG
Sbjct: 297 EMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 356
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ + E+ R + VT L
Sbjct: 357 NIGEAFLLFAELRYRSLAPSVVTYNTL 383
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA EM R +P+ +++Y T + L + K++ EA+ L M+ C
Sbjct: 153 GLCRNGGVFEAMGLIREM-GRKSVSPD-IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGC 210
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +D L K ++L + M GF+ ++++Y ++ CNN ++D
Sbjct: 211 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD--ADVVLYGTLISGFCNNGNLDRG 268
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+M+ G + +TY+ + L + + E + M ++ P + I
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A+++ N ++E G P + NVLL GL G + D + M+ +
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388
Query: 241 DVTMQKLKKAFYNESR 256
VT L K ++ +
Sbjct: 389 VVTYNTLMKGLCDKGK 404
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G V EA K F M + +V + + L + ++ +A+K R M +
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 457
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L ++ L +K ++LW ++ +GF +PN Y+ ++ C ++
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF--VPNSFTYSILIDGFCKMRMLNIA 515
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M HG P YN + L K + + ++ F EM +P ++ T I
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
L A + +F E+ ++E G+ P + + L+ L LG L + + E M+
Sbjct: 576 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 635
Query: 238 -LIYDVTMQKL 247
L+YD ++ L
Sbjct: 636 ALVYDSLLKGL 646
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ + F EM+ + +V+ Y + L R Q EA L M
Sbjct: 258 GFCNNGNLDRGKELFDEMLGK--GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K +TH + L ++MV G P+ + YN ++ LC V +
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE--PSNVTYNVLLSGLCKEGLVIDA 373
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE--WQPTPLNCATAI 178
F+ M+ G D +TYN + + L KV E F+ M NE +P I
Sbjct: 374 FKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 433
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L A++I +++ G + N+LL G G++ + +++L+
Sbjct: 434 GGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 10/244 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A K +MV++ +++ Y L ++ ++ EA++ + +
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKKGSCG--NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D K+ L+ M G N P L YN ++ LC ++
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN--PALFDYNTLMASLCKEGSLEQA 550
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M PD +++N + + +K V+ +M++ +P L +T I
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM------LN 234
L E + A ++ +G P + LL GL + G +++ +M L+
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670
Query: 235 RRIL 238
R+I+
Sbjct: 671 RKIV 674
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 15/247 (6%)
Query: 10 EANKTFGEMVERF----EWNPEHVLAYETFLI-TLIRGKQVDEALKFLRVMKGENCFPTL 64
+ N F E V F ++N A FL+ L R + A R M + P+
Sbjct: 50 KPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSF 109
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGI----GFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+L L++ QL +VG+ GF + N+ + N V+ LC N V
Sbjct: 110 ----GSLSALIECFADAQKPQLGFGVVGLVLKRGFTV--NVFIMNIVLKGLCRNGGVFEA 163
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M PD ++YN + L K KK+ E EM P + C T +
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+E+ + + G L+ G N G L + +EML + I
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283
Query: 241 DVTMQKL 247
VT L
Sbjct: 284 VVTYSCL 290
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
GW + + +A K EM+E PE+ Y + T + VDEA M KG
Sbjct: 277 GWCRVRDPKKAMKLLEEMIEAGH-KPEN-FTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 59 N-CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K F+ + L K + + +L M+ G +P++ Y V+ +C V
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG--CLPDVSTYKDVIEGMCMAEKV 392
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++F D+M G PD +TYN L +N+K E + M+++ P+
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + D+P+ A W + + + + ++ GL + R + EE++N+ +
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Query: 238 ----LIYDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
++D + +L KA + S M+ ++ S+ RR+ S+
Sbjct: 513 KLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSE 558
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ G+V + EM+ R + P V Y + + + L+ L M+ NC
Sbjct: 229 GFKESGDVTAVELFYHEMIRR-GFKPNSV-TYNIRIDAYCKKGCFGDGLRLLEEMEKANC 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL+ + + + + +L++ + I NL P++ +YNA + L + +V +
Sbjct: 287 PPTLETITTLIHGAGVAQNISRARELFN-EISIR-NLQPDIGVYNAFMSSLIRSREVQSA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G DS+TY+ +F L+++ + V +H+MI+ + P +
Sbjct: 345 LMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKW 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++++W Y+++ G P + ++L+ GL + G++ + A++ L R
Sbjct: 405 FCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLER 459
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + GN+ EA + F EM + +V Y + L R Q+ A M C
Sbjct: 255 GWCRAGNIPEAERVFTEM--KVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGC 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N L + VK + +Q+++ M +G P+ + YN ++ C + ++D
Sbjct: 313 EPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMG--CPPDTVTYNFLIESHCKDGNLDEA 370
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV G P++ T+N +F + K + V+ + +M + + + + + M
Sbjct: 371 LKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRM 430
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
+D + +++ + E+ + P + VL+ +G ++ +F EM+ + L
Sbjct: 431 FVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKP 490
Query: 239 ---IYDVTMQKLKKA 250
+Y+ +Q+L+KA
Sbjct: 491 SLPVYEKVLQQLRKA 505
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 30 LAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++ ETF I + +R EA+ M+ NC P FS + IL + +T
Sbjct: 175 ISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSF 234
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D + P++I+Y +V C ++ R F +M G P+ TY ++ + L
Sbjct: 235 FD---SLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDAL 291
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ ++ + F EM+ +P + + + + A E ++++N + G P
Sbjct: 292 CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDT 351
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ G L + + M+ +
Sbjct: 352 VTYNFLIESHCKDGNLDEALKVLNSMVKK 380
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + R K+++EA+K L M+ C P L ++ +D L KL+ +
Sbjct: 178 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 237
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ GF PN++ +N++V C +VD+ + MV G P+ +TY+ + + L
Sbjct: 238 KKMIEGGF--APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 295
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K++K E + EM P + I L AD+ E A ++ + +G P
Sbjct: 296 KSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
+ ++ G+L + ++ +EM +R ++ Y+ + L K
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + + ++ EA K L+ M+ + P + ++ +D L KL + +
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G +++P+++ Y+ V+ LC ++ + + D+M G PD +TY I + L K
Sbjct: 414 QMQESG-DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E E M + P + T I+ L A + + A + + G P +
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
N ++ GL GR+ + ++ + M + R
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMKDGR 560
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K +VEA K M + NP+ V+ Y T + L + +++EA L+ MK C
Sbjct: 434 GLCKSDMLVEAQKLLDRMC-KAGCNPD-VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K ++ + M G PNL+ YN +V LC + +
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP--PNLVTYNTMVNGLCVSGRIKEA 549
Query: 121 FRFFDQMVFHGA--FPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M A PD+ TY I L+ + V E E +M
Sbjct: 550 QQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 7/209 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ + + + + VD+A K L +M + P + +S +D L K ++
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M G P+ Y+A++ LC + ++ + +M G PD + Y+ I
Sbjct: 308 EEMKTRGVT--PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG-ILPLE 206
K+ K+ E + EM K P + T I L + A I + E+G +LP
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++ GL SD+ A+++L+R
Sbjct: 426 VTYSTVINGLCK----SDMLVEAQKLLDR 450
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 85/230 (36%), Gaps = 12/230 (5%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYE-------TFLITLIRGKQVDEALKFLRVMKGE 58
G VV + K + F W P + + + L L+R K+ EA R
Sbjct: 47 GRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLA 106
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+C P + ++ + D ++L + M GF P+ + ++ + N D+D
Sbjct: 107 SCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGF--APDAFTHTPIITAMANAGDLD 164
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D + G P+ +TY + + KK+ E EM + P + +
Sbjct: 165 GAM---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 221
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
L A ++ ++E G P + N L+ G G + D R+
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 271
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + K+ EA FL M E P + +S A+D VK+ ++++ +
Sbjct: 565 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+ P+++ YN ++ C V D+MV G P +TYN++ + KN
Sbjct: 625 ARGY--CPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGD 682
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + + M+ E +P + T I L +A P+ AI +WN + G P S
Sbjct: 683 IDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 742
Query: 212 LLVGLRNLG 220
L+ GL G
Sbjct: 743 LIHGLCKCG 751
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 2/213 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
++ + L ++D AL R M C + ++N +D L N L M
Sbjct: 459 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 518
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G GF P +N++ G LC DV +M HG P Y ++ + L K K
Sbjct: 519 KGSGFR--PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ E NF EM++ + P + + AI + + A+EI+ I G P + N
Sbjct: 577 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
L+ G + R+S+ +EM+ + ++ VT
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 669
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K EA EMV R + P+ ++AY + ++ K VD+AL+ R + P
Sbjct: 574 KRKRSAEACNFLAEMV-REGFLPD-IVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPD 631
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K+ + + D MV G L+P+++ YN ++ C N D+D F
Sbjct: 632 VVAYNTLINGFCKVKRVSEAHDILDEMVAKG--LVPSVVTYNLLIDGWCKNGDIDQAFHC 689
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+MV P+ +TY + + L + + + ++EM P ++ I L
Sbjct: 690 LSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCK 749
Query: 184 ADEPEFAI 191
P+ A+
Sbjct: 750 CGWPDAAL 757
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 5/173 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V EA+ EMV + P V+ Y + + +D+A L M G+
Sbjct: 641 GFCKVKRVSEAHDILDEMVAK-GLVPS-VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKER 698
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L + LW+ M G G + PN I + A++ LC D
Sbjct: 699 EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCS--PNRISFIALIHGLCKCGWPDAA 756
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+F +M PD++ Y + I NK EM+ P PL+
Sbjct: 757 LLYFREM-GERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLD 808
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G++ +A MV + E P +V+ Y T + L + D+A+ M+G+ C
Sbjct: 676 GWCKNGDIDQAFHCLSRMVGK-EREP-NVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGC 733
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + L K + + M G P+ I+Y A++ +N +
Sbjct: 734 SPNRISFIALIHGLCKCGWPDAALLYFREM---GERETPDTIVYVALITSFISNKNPTLA 790
Query: 121 FRFFDQMVFHGAFPDSLTYN 140
F +MV G FPD L N
Sbjct: 791 FEILKEMVAKGKFPDPLDKN 810
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F E+ R W HVL+ ++T + +VD+A + + M+ K F
Sbjct: 252 KALSVFNEIYGR-GWVDGHVLS--ILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCV 308
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ V+ + +QL+ M GF P++ +Y+A++G LC +++ +M
Sbjct: 309 LIHGFVRQSRVDKALQLFKKMQKSGF--APDVSVYDALIGGLCAKKEIEKALHLLSEMKE 366
Query: 130 HGAFPD 135
G PD
Sbjct: 367 LGIDPD 372
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ G+V + EM+ R + P V Y + + + L+ L M+ NC
Sbjct: 229 GFKESGDVTAVELFYHEMIRR-GFKPNSV-TYNIRIDAYCKKGCFGDGLRLLEEMEKANC 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL+ + + + + +L++ + I NL P++ +YNA + L + +V +
Sbjct: 287 PPTLETITTLIHGAGVAQNISRARELFN-EISIR-NLQPDIGVYNAFMSSLIRSREVQSA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G DS+TY+ +F L+++ + V +H+MI+ + P +
Sbjct: 345 LMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKW 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++++W Y+++ G P + ++L+ GL + G++ + A++ L R
Sbjct: 405 FCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLER 459
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + R K+++EA+K L M+ C P L ++ +D L KL+ +
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ GF PN++ +N++V C +VD+ + MV G P+ +TY+ + + L
Sbjct: 116 KKMIEGGF--APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K++K E + EM + P + I L AD+ E A ++ + +G P
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
+ ++ G+L + ++ +EM +R ++ Y+ + L K
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + EA + M P+ V+ Y + + + ++ EA K L+ M+ +
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSG-CTPD-VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 263
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L KL + D M G +++P+++ Y+ V+ LC ++ +
Sbjct: 264 SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG-DVLPDVVTYSTVINGLCKSDMLVEA 322
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M G PD +TY I + L K ++ E E M + P + T I+
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
L A + + A + + G P + N ++ GL GR+ + ++ + M + R
Sbjct: 383 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 438
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ + + + + VD+A K L +M + P + +S +D L K ++
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M G P+ Y+A++ LC + ++ + +M G PD + Y+ I
Sbjct: 186 EEMKASGVT--PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 243
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG-ILPLE 206
K+ K+ E + EM K P + T I L + A I + + E+G +LP
Sbjct: 244 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++ GL SD+ A+++L+R
Sbjct: 304 VTYSTVINGLCK----SDMLVEAQKLLDR 328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K +VEA K M + NP+ V+ Y T + L + +++EA L+ MK C
Sbjct: 312 GLCKSDMLVEAQKLLDRMC-KAGCNPD-VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K ++ + M G PNL+ YN +V LC + +
Sbjct: 370 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP--PNLVTYNTMVNGLCVSGRIKEA 427
Query: 121 FRFFDQMVFHGA--FPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M A PD+ TY I L+ + V E E +M
Sbjct: 428 QQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 59/134 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ Y A++ ++ + ++M G P+ +TYN++ + L K V ++
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+MI+ + P + + + + A ++ ++ G+ P + + L+ GL
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 219 LGRLSDVRRFAEEM 232
+ + + EEM
Sbjct: 175 SQKFLEAKEVLEEM 188
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
D ++L + M GF P+ + ++ + N D+D D + G P+ +
Sbjct: 4 GDLHAALELLEEMKSAGF--APDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVV 58
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY + + KK+ E EM + P + + L A ++ +
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRF 228
+E G P + N L+ G G + D R+
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 149
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + K+ EA FL M E P + +S A+D VK+ ++++ +
Sbjct: 525 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 584
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+ P+++ YN ++ C V D+MV G P +TYN++ + KN
Sbjct: 585 ARGY--CPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGD 642
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + + M+ E +P + T I L +A P+ AI +WN + G P S
Sbjct: 643 IDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 702
Query: 212 LLVGLRNLG 220
L+ GL G
Sbjct: 703 LIHGLCKCG 711
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 2/213 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
++ + L ++D AL R M C + ++N +D L N L M
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 478
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G GF P +N++ G LC DV +M HG P Y ++ + L K K
Sbjct: 479 KGSGFR--PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ E NF EM++ + P + + AI + + A+EI+ I G P + N
Sbjct: 537 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 596
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
L+ G + R+S+ +EM+ + ++ VT
Sbjct: 597 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 629
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K EA EMV R + P+ ++AY + ++ K VD+AL+ R + P
Sbjct: 534 KRKRSAEACNFLAEMV-REGFLPD-IVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPD 591
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K+ + + D MV G L+P+++ YN ++ C N D+D F
Sbjct: 592 VVAYNTLINGFCKVKRVSEAHDILDEMVAKG--LVPSVVTYNLLIDGWCKNGDIDQAFHC 649
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+MV P+ +TY + + L + + + ++EM P ++ I L
Sbjct: 650 LSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCK 709
Query: 184 ADEPEFAI 191
P+ A+
Sbjct: 710 CGWPDAAL 717
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 5/173 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V EA+ EMV + P V+ Y + + +D+A L M G+
Sbjct: 601 GFCKVKRVSEAHDILDEMVAK-GLVPS-VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKER 658
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L + LW+ M G G + PN I + A++ LC D
Sbjct: 659 EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCS--PNRISFIALIHGLCKCGWPDAA 716
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+F +M PD++ Y + I NK EM+ P PL+
Sbjct: 717 LLYFREM-GERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLD 768
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G++ +A MV + E P +V+ Y T + L + D+A+ M+G+ C
Sbjct: 636 GWCKNGDIDQAFHCLSRMVGK-EREP-NVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGC 693
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + L K + + M G P+ I+Y A++ +N +
Sbjct: 694 SPNRISFIALIHGLCKCGWPDAALLYFREM---GERETPDTIVYVALITSFISNKNPTLA 750
Query: 121 FRFFDQMVFHGAFPDSLTYN 140
F +MV G FPD L N
Sbjct: 751 FEILKEMVAKGKFPDPLDKN 770
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F E+ R W HVL+ ++T + +VD+A + + M+ K F
Sbjct: 212 KALSVFNEIYGR-GWVDGHVLS--ILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCV 268
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ V+ + +QL+ M GF P++ +Y+A++G LC +++ +M
Sbjct: 269 LIHGFVRQSRVDKALQLFKKMQKSGF--APDVSVYDALIGGLCAKKEIEKALHLLSEMKE 326
Query: 130 HGAFPD 135
G PD
Sbjct: 327 LGIDPD 332
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 37/267 (13%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + +A F +M+ E F+ N V+ Y T + L + + A++ LR M+ N
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPN---VVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 202
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN----------------------- 96
C P + +++ +D L K T L+ MVG G +
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262
Query: 97 ----------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+MP++++++ VV LC + D M+ G P+ +TYN + +
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ E F M+ N + P ++ T I + A ++ + + ++P
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEML 233
+ N L+ GL ++GRL D EM+
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMV 409
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 10/269 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V EA F +MV + +P+ + Y + + +L + L M P
Sbjct: 219 KDRQVTEAFNLFSKMVGQ-GISPD-IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D L K T + D+M+ G PN++ YNA++ C +++D +
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE--PNVVTYNALMDGHCLQSEMDEAVKV 334
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV +G P+ ++YN + K +++ + F EM + E P + T + L
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILI 239
+ AI +++ ++ +G +P A+ +LL L L + + + ++ I I
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERR 268
Y + + + +A E + RD F +L +
Sbjct: 455 YTIVIDGMCRA--GELEAARDIFSNLSSK 481
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV + P+ + Y L L + +DEA+ L+ ++G N
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQI-PD-LATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D + + + ++ + G L PN+ Y ++ LC +D
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG--LRPNVRTYTIMINGLCRRGLLDEA 506
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M +G PD TYN I + L++NK+ EM+ + + M
Sbjct: 507 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Query: 181 LLD 183
L D
Sbjct: 567 LCD 569
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K+ D+ H L+D M+G GF PN++ Y ++ LC + + R M PD
Sbjct: 152 KIGDALH---LFDKMIGEGFQ--PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 206
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+ Y I + L K+++V E N F +M+ P + I L + E + + N
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 266
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ + I+P + ++ L G++++ + M+ R +
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 308
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 7/215 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM ++ E P V Y T + L ++ +A+ M
Sbjct: 356 GYCKIQRMDKATYLFEEMCQK-ELIPNTV-TYNTLMHGLCHVGRLQDAIALFHEMVAHGQ 413
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K +H + ++ I G N+ P++ +Y V+ +C +++
Sbjct: 414 IPDLATYRILLDYLCK---KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 470
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TY ++ L + + E F EM N P T
Sbjct: 471 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 530
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
LL E AI++ +L G + S LLV
Sbjct: 531 GLLQNKEALRAIQLLQEMLARG-FSADVSTTTLLV 564
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 2/231 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + L ++ + KQ M P + + ++ LN
Sbjct: 64 PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFS 123
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G L P+ + ++ LC + + FD+M+ G P+ +TY +
Sbjct: 124 VLAKILKLG--LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLING 181
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M + QP + + I L + A +++ ++ GI P
Sbjct: 182 LCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPD 241
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L+ L NL V +M+N +I+ V + A E +
Sbjct: 242 IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y+ + R ++D A++FL M + P + ++ + L K + H V+++ +
Sbjct: 257 CYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKL 316
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G PN+ YN ++ L ++ D QM+ G PD +TYN + CL ++
Sbjct: 317 DEVG--CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDG 374
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V E +M+ +QP ++ T + L A + AIE+ ++ENG P E +
Sbjct: 375 MVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYT 434
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL---IYDVTMQKLKKAF 251
+L+ G+ S R A E+ N + I + + ++L K F
Sbjct: 435 LLIEGI----GFSGSRTQAMELANSLYIMNAISEDSFKRLNKTF 474
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGENCFPT 63
+ N +E+ KT + ++R ++P+ V+ + + T ++D ALK F ++K NC PT
Sbjct: 56 KANRIESAKTVLDRMKRKGFSPD-VVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPT 114
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ ++ + ++L D M+ G L P+ YN + LC VD F F
Sbjct: 115 LITYTILIEAYILEGGIDEALKLLDEMLSRG--LEPDTFTYNVITRGLCKEGKVDRAFEF 172
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ G PD +TYN++ L+ K E E + E+ +P + + I+ L
Sbjct: 173 VRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCR 232
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ E ++ + + E G+ P + L+ G+L F + M+
Sbjct: 233 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V A + F + P+ V+ Y L L+ + DE K++ + C
Sbjct: 159 GLCKEGKVDRAFE-FVRTLNSRGCKPD-VITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L + +V L +M G L P+ Y+ ++ C +D
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG--LTPDAYCYDPLIAAFCREGKLDMA 274
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D M+ G PD + YN I L KN F ++ + P + T ++
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L + + A+ + + +L GI P + N L+ L G + + +ML+ R
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394
Query: 237 ILIYDVTMQKLKKA 250
I+ Y + L KA
Sbjct: 395 IVSYKTVLLGLCKA 408
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM ++ P+ ++ Y L + + +V++A++FL+ + C P
Sbjct: 213 KRSGYKQAMKLLDEMHDK-GCAPD-IVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPN 270
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L +L + M G PN++ +N ++ LC V+
Sbjct: 271 TVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCP--PNVVTFNMLISFLCRRGLVEPAMEV 328
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+QM +G P+SL+YN + K KK+H+ F M+ P ++ T +T L
Sbjct: 329 LEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR 388
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E + AIE+ + + + G P+ S N ++ GL G+ + +EM ++ + +T
Sbjct: 389 NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIIT 448
Query: 244 MQKLKKAFYNESR 256
+ E R
Sbjct: 449 YSTIASGLCREDR 461
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 3/232 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
+VE E + ++ P + L+Y L + K++ +A++F+ +M C+P +
Sbjct: 320 GLVEPAMEVLEQMPQYGCTP-NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + + ++L + G + P LI YN V+ L D+
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCS--PVLISYNTVIDGLTKAGKTKEALELLDE 436
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G PD +TY+ I L + ++ E F ++ +PT + L E
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+++ Y++ +G +P E++ +L+ GL G + + R ++ +R ++
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A K EM + P +V+ + + L R V+ A++ L M C P ++
Sbjct: 289 DAEKLMEEMAHK--GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L K ++ ++MV G P+++ YN ++ LC N +VD Q+
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRG--CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD 404
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P ++YN + + L K K E EM QP + +T + L D E
Sbjct: 405 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464
Query: 190 AIEIWNYILENGILPLEASANVLLVGL 216
A+ + + + GI P A N +L+GL
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGL 491
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 5/231 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A K + M + C
Sbjct: 245 GICQEGRVEDAME-FLKNLPSYGCEPNTV-SYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ + M G PN + YN ++ C +
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT--PNSLSYNPLLHAFCKQKKIHKA 360
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + MV G +PD ++YN + L +N +V H++ P ++ T I
Sbjct: 361 MEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDG 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
L A + + A+E+ + + G+ P + + + GL R+ + VR F +
Sbjct: 421 LTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 6/202 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG + AL L M C P + ++ L+ K + ++L D M
Sbjct: 171 TLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDK 230
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G P+++ YN V+ +C V++ F + +G P++++YN++ + L ++
Sbjct: 231 G--CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ E EM P + I+ L E A+E+ + + G P S N LL
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
++ F E M++R
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSR 370
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 79/228 (34%), Gaps = 29/228 (12%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
L L+R ++D+AL+ + + G N P+ ++ KL S T ++ G
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLN-PPSPAAVGPCAALIKKLCASGRTADARRVLAASGP 132
Query: 96 NLM----------------------------PNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
++M P+ YN ++ LC N + M
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G PD +TY ++ E K + EM P + + +
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E A+E + G P S N++L GL R D + EEM ++
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK 300
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 13 KTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
+ G ++ E P+H L+Y L + K++D A+++L +M C+P + +
Sbjct: 363 RLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 422
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L L K + V++ + + G + P LI YN V+ L + ++M
Sbjct: 423 NTLLTALCKDGKADAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G PD +TY+ + L KV E FH+M +P+ + + L A +
Sbjct: 481 RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 540
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGL 216
AI+ Y++E G P +A+ +L+ G+
Sbjct: 541 SRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+ V +A K EM R + V+ Y + + + ++DEA+KFL M C P +
Sbjct: 257 DSGVGQAMKLLDEM--RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNV 314
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ L + +L M+ G + P+++ +N ++ LC +
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLADMLRKGCS--PSVVTFNILINFLCRKRLLGRAIDVL 372
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M HG P+SL+YN + + KK+ + M+ P + T +T L
Sbjct: 373 EKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 432
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIY 240
+ + A+EI N + G P+ + N ++ GL +G+ EEM L I+ Y
Sbjct: 433 GKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492
Query: 241 DVTMQKL 247
++ L
Sbjct: 493 STLLRGL 499
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA K M + P +V+ + L ++ + +A + L M + C
Sbjct: 288 GICKEGRLDEAIKFLNNM-PLYGCQP-NVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + + M G MPN + YN ++ C +D
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG--CMPNSLSYNPLLHGFCQEKKMDRA 403
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV G +PD +TYN + L K+ K +++ P + T I
Sbjct: 404 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDG 463
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + E+A E+ + G+ P + + LL GL G++ + + +M +
Sbjct: 464 LTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPS 523
Query: 237 ILIYDVTMQKLKKA 250
+ Y+ M L KA
Sbjct: 524 AVTYNAIMLGLCKA 537
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A L L+R +++E LKFL M + P + ++ + + + ++ +I+
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G +P++I YN ++G C + ++D + ++M PD +TYN I L +
Sbjct: 169 ENSG--AVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG 223
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ E ++ E P + I + A+++ + + + G P + N
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
VL+ G+ GRL + +F M
Sbjct: 284 VLINGICKEGRLDEAIKFLNNM 305
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 109/271 (40%), Gaps = 8/271 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + E K M+ ++ + V+A + + R + +A + + +++ P
Sbjct: 119 RNGELEEGLKFLERMI--YQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K + +Q+ + M ++ P+++ YN ++ LC++ +
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+ + +PD +TY ++ E + V + EM K +P + I +
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ AI+ N + G P + N++L + + GR D R +ML + VT
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
L F R + D LE+ K M
Sbjct: 352 FNILIN-FLCRKRLLGRAIDVLEKMPKHGCM 381
>gi|413917805|gb|AFW57737.1| hypothetical protein ZEAMMB73_139699 [Zea mays]
Length = 276
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
WEKEGN V A FGEMV R W+ +V Y++FL TL+RG +DEA KFL+VM+ + C
Sbjct: 201 WEKEGNAVRAKSVFGEMVVRIGWDAANVSVYDSFLSTLVRGGLLDEAFKFLQVMRSKGCL 260
Query: 62 PTLKFF 67
P + FF
Sbjct: 261 PGINFF 266
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G KEG + EA +M +R ++ +P HV + +R ++++A+ F R M+ +
Sbjct: 440 GLCKEGRMDEAISIVNQMDKRGYKLDP-HVC--NPLINGFVRASKLEDAINFFREMECKG 496
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C PT+ ++ + L K + M+ + P++I + ++ LC ++
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK--PDMITCSLLMDGLCQEKKIEM 554
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ Q + G PD YN++ L K+ + + M ++ P + T +
Sbjct: 555 ALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLME 614
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A EIW+ IL++G+ P S N+ + GL + R+SD F + LNR IL
Sbjct: 615 GLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674
Query: 240 YDVTMQKLKKAFYN 253
VT L +A N
Sbjct: 675 TAVTWNILVRAAVN 688
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 3/248 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E VE + E++ + PE Y + L + ++++ALK + +
Sbjct: 373 ENGKVEEAISIWELLCKKGCRPEST-TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA 431
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S+ +D L K + + + M G+ L P++ N ++ + +++ FF
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAINFF 489
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M G P ++YN + + L K ++ E +F EM++ EW+P + C+ + L
Sbjct: 490 REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQE 549
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ E A+ +W L+ G P N+L+ GL ++ +L D + M + VT
Sbjct: 550 KKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTR 609
Query: 245 QKLKKAFY 252
L + Y
Sbjct: 610 NTLMEGLY 617
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 13 KTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD 72
++F E + +P ++ Y + + +Q+++A+ L M +N P + + ++
Sbjct: 136 ESFSRYFESMDVSP-NLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLIN 194
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+VK+ D ++++D M G ++ ++ YN ++ + D D ++++V +
Sbjct: 195 GMVKVGDLLGALKVFDEMSVRG--VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCS 252
Query: 133 -FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
+P+ +TYN++ L K + E + M KNE + ++ I L +A + A+
Sbjct: 253 VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAV 312
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
++ I+E+ ++ + N +L G G++ +
Sbjct: 313 RVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKE 345
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 4/248 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A TF M + F P V +Y T L + + D A F R + + P L+ ++
Sbjct: 98 KALDTFQNMQDIFGCKP-GVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNI 156
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ I K + L D M NL P++ Y ++ + D+ + FD+M
Sbjct: 157 LIKISCKKQQIEKAISLLDWM--WSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSV 214
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAITMLLDADEPE 188
G D YNM+ + K+ + + + ++K+ P + I L +
Sbjct: 215 RGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFD 274
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
++EIW + +N + + L+ GL G + R +E++ +++ VT +
Sbjct: 275 ESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAML 334
Query: 249 KAFYNESR 256
F +
Sbjct: 335 NGFCRAGK 342
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 20/265 (7%)
Query: 17 EMVERFEWNP--EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
E+ ER N + + Y + + L +D A++ + + + + L+
Sbjct: 278 EIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGF 337
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+ + +LW +M G ++ YN ++ L N V+ ++ + G P
Sbjct: 338 CRAGKIKESFELWMVM---GKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRP 394
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----A 190
+S TY ++ L KN ++++ F E E P L+ A A + ++D E A
Sbjct: 395 ESTTYGVLIHGLCKNGRLNKALKIFKEA---EDGPGKLD-AYAYSSMVDGLCKEGRMDEA 450
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQK 246
I I N + + G N L+ G +L D F EM + I+ Y+ ++
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510
Query: 247 LKKA-FYNESRSMRDRFDSLERRWK 270
L KA ++E+ S LE+ WK
Sbjct: 511 LCKAERFSEAYSFVKEM--LEKEWK 533
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V +A K EM R + + V+ Y + + + ++DEA+KFL M C P
Sbjct: 206 KESGVGQAMKLLDEM--RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 263
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + +L M+ G + P+++ +N ++ LC +
Sbjct: 264 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS--PSVVTFNILINFLCRQGLLGRAIDI 321
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 322 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 381
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+EI N + G P+ + N ++ GL +G+ + +EM + + +T
Sbjct: 382 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 441
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 442 YSSLVSGLSREGK 454
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P H L+Y L + K++D A+++L +M C+P + ++
Sbjct: 315 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L + + D+M
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCS--PVLITYNTVIDGLSKVGKTERAIKLLDEMRR 432
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ +P + + + L + + +
Sbjct: 433 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 492
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y++ P EA+ +L+ G+ G + E+ +R ++
Sbjct: 493 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A ++++R P+ V+ Y T L TL ++ +A++ L + C
Sbjct: 136 GYCKSGEIDNAL----QVLDRMNVAPD-VVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ ++ K + ++L D M G P+++ YN ++ +C +D
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK--PDVVTYNVLINGICKEGRLDEA 248
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F + M +G P+ +T+N+I + + + E +M++ P+ + I
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L AI+I + +G P S N LL G ++ + + M++R
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368
Query: 241 DVTMQKLKKAFYNESR 256
VT L A + +
Sbjct: 369 IVTYNTLLTALCKDGK 384
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA K M + P +V+ + L ++ + +A K L M + C
Sbjct: 238 GICKEGRLDEAIKFLNNM-PSYGCQP-NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 295
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + + M G PN + YN ++ C +D
Sbjct: 296 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT--PNSLSYNPLLHGFCKEKKMDRA 353
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G +PD +TYN + L K+ KV +++ P + T I
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E AI++ + + G+ P + + L+ GL G++ + +F ++
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+LIRG + +A + +++ P + ++ + K + + +Q+ D M
Sbjct: 97 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 153
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N+ P+++ YN ++ LC++ + D+ + +PD +TY ++ E K V
Sbjct: 154 --NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 211
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM +P + I + + AI+ N + G P + N++L
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
+ + GR D + +ML +
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRK 293
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA K +M+ER + +P V Y T + TL + QV+EA K V+ G+
Sbjct: 345 GLCKLGEVDEAVKVLNQMIER-DCSPNTV-TYNTIISTLCKENQVEEATKLALVLTGKGI 402
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG------------------------FN 96
P + +++ + L + T ++L+ M G N
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462
Query: 97 LMP---------NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L+ N+I YN ++ C N + FDQM G +S+TYN + + L
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+++V E +MI +P + +T A + + A +I + +G P
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ L+ GL GR+ + + + I + + +A + RS
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRS 632
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RGK + EAL L+ M+ C + ++ +D K +++D M G + N
Sbjct: 454 RGK-LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS--RN 510
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ YN ++ LC + V+ + DQM+ G PD TYN + K + + +
Sbjct: 511 SVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
M + +P + T I L A E A ++ I GI + N ++ L
Sbjct: 571 TMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRK 630
Query: 221 RLSDVRRFAEEMLNR 235
R + R EM+ +
Sbjct: 631 RSKEAVRLFREMIEK 645
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + EA + EM R + P+ + + L + V AL+ + +M E
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDK-YTFNMLVNGLSKTGHVKHALEVMDMMLREGF 332
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L KL + V++ + M I + PN + YN ++ LC N V+
Sbjct: 333 DPDIYTYNSLISGLCKLGEVDEAVKVLNQM--IERDCSPNTVTYNTIISTLCKENQVEEA 390
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQP 169
+ + G PD TYN + + CL +N V + EM P
Sbjct: 391 TKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV--AMELYKEMKTKGCHP 439
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 3/209 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + + K++ EA + M+ + ++ +D L K QL
Sbjct: 475 NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLM 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ G L P+ YN+++ C D+ M G PD +TY + L
Sbjct: 535 DQMIMEG--LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V + TP I L + A+ ++ ++E P
Sbjct: 593 KAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAV 652
Query: 208 SANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL + G + + F EML R
Sbjct: 653 TYKIVFRGLCQGGGPIGEAVDFVMEMLER 681
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ +N +V L V + D M+ G PD TYN + L K +V E
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
++MI+ + P + T I+ L ++ E A ++ + GILP + N L+ GL
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+Q D M + F ++ N YN ++ +L + N + V MV G PD T+N++
Sbjct: 144 LQFVDAM-EVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILI 202
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L + ++ EM P T + ++ + A+ + ++E G +
Sbjct: 203 KALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCV 262
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ NVL+ G GR+ + RF EEM
Sbjct: 263 VTNVTVNVLVNGFCKEGRIEEALRFIEEM 291
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F L+P+ + ++ ++D R +QMV G ++T N++ K ++ E
Sbjct: 224 FGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEE 283
Query: 155 VENFFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F EM ++ + P + L + A+E+ + +L G P + N L+
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLI 343
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
GL LG + + + +M+ R
Sbjct: 344 SGLCKLGEVDEAVKVLNQMIER 365
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M P
Sbjct: 148 KEGEMRLAQSVF-DAITKWGLRPS-VVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K +L++ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNG--LVPNGVTFTTLIHGHCKNEKVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD +TYN + L K ++ +V + EMI N +P ++ T I
Sbjct: 264 YKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+E+ N +++ I + + L+ L GR SD + EML+
Sbjct: 324 EGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLS 374
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L M G P++ Y+ ++ LC +D
Sbjct: 169 PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQ--PDVYTYSILINGLCKEGKLDEAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F++M+ +G P+ +T+ + KN+KV + +M+ P + T I L
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
E + ++ + ++ NG+ P + S L+ G G L +M+ I + D
Sbjct: 287 CKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDD 346
Query: 242 VTMQKLKKAFYNESRS 257
V L E R+
Sbjct: 347 VAYTALISCLCREGRA 362
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EAN+ F EM++ P V + T + + ++VD A++ + M +
Sbjct: 215 GLCKEGKLDEANELFNEMLDN-GLVPNGV-TFTTLIHGHCKNEKVDLAMEIYKQMLSQGL 272
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K + L D M+ G L P+ I Y ++ C D++
Sbjct: 273 SPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG--LKPDKISYTTLIDGSCKEGDLEIA 330
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M+ D + Y + CL + + + E EM+ +P I
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ + A ++ + +G LP
Sbjct: 391 FCKKRDSKTASKLLREMQRDGPLP 414
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + ++ P + L+Y L + K++D+A+ FL +M C+P + ++ L L +
Sbjct: 196 EQIPKYGCTP-NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 254
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ V+L + G P LI YN V+ L ++MV G PD
Sbjct: 255 SGEVDVAVELLHQLKDKG--CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ I L + ++ + F ++ +P + I L E AI+++ Y
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ NG +P E++ +L+ GL G + + R +E+ +R
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 79 KRSGYKQAMKLLDEM--RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 136
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L +L M G PN++ +N ++ LC V+
Sbjct: 137 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP--PNVVTFNMLISFLCRKGLVEPALEV 194
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+Q+ +G P+SL+YN + K KK+ + F M+ P ++ T +T L
Sbjct: 195 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 254
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E + A+E+ + + + G P+ S N ++ GL G+ + EM+++ + +T
Sbjct: 255 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 314
Query: 244 MQKLKKAFYNESR 256
+ E R
Sbjct: 315 YSTIAAGLCREDR 327
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A + + M + C
Sbjct: 111 GICQEGRVDDAIE-FLKNLPSYGCEPNTV-SYNIVLKGLCTAERWEDAEELMGEMGQKGC 168
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ + + G PN + YN ++ C +D
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT--PNSLSYNPLLHAFCKQKKMDKA 226
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D MV G +PD ++YN + L ++ +V H++ P ++ T I
Sbjct: 227 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 286
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD-VRRFAE 230
L A + + A+E+ N ++ G+ P + + + GL R+ D +R F +
Sbjct: 287 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 47/134 (35%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ LC N D+M+ PD +TY ++ E K +
Sbjct: 30 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM P + + + + AIE + G P S N++L GL
Sbjct: 90 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149
Query: 219 LGRLSDVRRFAEEM 232
R D EM
Sbjct: 150 AERWEDAEELMGEM 163
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 5/184 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+AY + Q+D A + + M E P ++ + L + + + + D
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M + +P+++ Y ++ C + + D+M G PD +TYN++ + +
Sbjct: 58 M--LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 115
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+V + F + +P ++ + L A+ E A E+ + + G P +
Sbjct: 116 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 175
Query: 210 NVLL 213
N+L+
Sbjct: 176 NMLI 179
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V +A K EM R + + V+ Y + + + ++DEA+KFL M C P
Sbjct: 94 KESGVGQAMKLLDEM--RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 151
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + +L M+ G + P+++ +N ++ LC +
Sbjct: 152 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS--PSVVTFNILINFLCRQGLLGRAIDI 209
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 210 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 269
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+EI N + G P+ + N ++ GL +G+ + +EM + + +T
Sbjct: 270 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 329
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 330 YSSLVSGLSREGK 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P H L+Y L + K++D A+++L +M C+P + ++
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L + + D+M
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCS--PVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ +P + + + L + + +
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 380
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y++ P EA+ +L+ G+ G + E+ +R ++
Sbjct: 381 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA K M + P +V+ + L ++ + +A K L M + C
Sbjct: 126 GICKEGRLDEAIKFLNNM-PSYGCQP-NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 183
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + + M G PN + YN ++ C +D
Sbjct: 184 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG--CTPNSLSYNPLLHGFCKEKKMDRA 241
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G +PD +TYN + L K+ KV +++ P + T I
Sbjct: 242 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 301
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E AI++ + + G+ P + + L+ GL G++ + +F ++
Sbjct: 302 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 54/133 (40%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L ++ V C + V + D+M G+ PD +TYN++ + K ++ E F
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+ M QP + + + A ++ + +L G P + N+L+ L
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 220 GRLSDVRRFAEEM 232
G L E+M
Sbjct: 201 GLLGRAIDILEKM 213
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA + F + + + P+ V+++ L +L G + +A+K L M + C
Sbjct: 260 GFCKGGRLDEAIR-FLKKLPSYGCQPD-VISHNMILRSLCSGGRWMDAMKLLATMLRKGC 317
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + ++M G PN +N ++ CN +D
Sbjct: 318 LPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT--PNSRSFNPLIQGFCNGKGIDRA 375
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV G +PD +TYN++ L K+ KV + ++ P+ ++ T I
Sbjct: 376 IEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 435
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
LL + E A+E+ + G+ P + ++ GL G++ + +F
Sbjct: 436 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G+ + E P+H ++ + GK +D A+++L +M C+P + ++
Sbjct: 337 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNI 396
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V + + G + P+LI YN V+ L + ++M +
Sbjct: 397 LLTALCKDGKVDDAVVILSQLSSKGCS--PSLISYNTVIDGLLKVGKAELAVELLEEMCY 454
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +T + L + KV E FFH + + +P + IT L + +
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSL 514
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQ 245
AI+ ++ G P EA+ L+ G+ G D + + E+ +R R L+ V+++
Sbjct: 515 AIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLE 574
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 11/253 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA + +++R +P + Y+ L +L ++ +A++ L C
Sbjct: 158 GYCKSGEIEEALR----VLDRMGVSP-NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC 212
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + + +D K + ++L++ M G P+++ YN ++ C +D
Sbjct: 213 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCK--PDVVTYNVLIKGFCKGGRLDEA 270
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
RF ++ +G PD +++NMI L + + M++ P+ + I
Sbjct: 271 IRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINF 330
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L A+ + + ++G P S N L+ G N + + E M++R
Sbjct: 331 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPD 390
Query: 237 ILIYDVTMQKLKK 249
I+ Y++ + L K
Sbjct: 391 IVTYNILLTALCK 403
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
LIR +++E +FL M + P + + + K+ + + Q+ I+ G +
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVI- 147
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
++ YN ++ C + +++ R D+M G P++ TY+ + L K+ +
Sbjct: 148 -DVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQV 203
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILPLEASANVLLV 214
++++ P + C T+L+DA E A++++N + G P + NVL+
Sbjct: 204 LGRQLQSKCYPDVVTC----TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIK 259
Query: 215 GLRNLGRLSDVRRFAEEM 232
G GRL + RF +++
Sbjct: 260 GFCKGGRLDEAIRFLKKL 277
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V +A K EM R + + V+ Y + + + ++DEA+KFL M C P
Sbjct: 263 KESGVGQAMKLLDEM--RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 320
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + L + +L M+ G + P+++ +N ++ LC +
Sbjct: 321 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS--PSVVTFNILINFLCRQGLLGRAIDI 378
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M HG P+SL+YN + K KK+ + M+ P + T +T L
Sbjct: 379 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 438
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+EI N + G P+ + N ++ GL +G+ + +EM + + +T
Sbjct: 439 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 498
Query: 244 MQKLKKAFYNESR 256
L E +
Sbjct: 499 YSSLVSGLSREGK 511
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 15 FGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
G ++ E P H L+Y L + K++D A+++L +M C+P + ++
Sbjct: 372 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K V++ + + G + P LI YN V+ L + + D+M
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCS--PVLITYNTVIDGLSKVGKTERAIKLLDEMRR 489
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+ + L + KV E FFH++ +P + + + L + + +
Sbjct: 490 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 549
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
AI+ Y++ P EA+ +L+ G+ G + E+ +R ++
Sbjct: 550 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A ++++R P+ V+ Y T L TL ++ +A++ L + C
Sbjct: 193 GYCKSGEIDNAL----QVLDRMNVAPD-VVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ ++ K + ++L D M G P+++ YN ++ +C +D
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK--PDVVTYNVLINGICKEGRLDEA 305
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F + M +G P+ +T+N+I + + + E +M++ P+ + I
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L AI+I + +G P S N LL G ++ + + M++R
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425
Query: 241 DVTMQKLKKAFYNESR 256
VT L A + +
Sbjct: 426 IVTYNTLLTALCKDGK 441
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA K M + P +V+ + L ++ + +A K L M + C
Sbjct: 295 GICKEGRLDEAIKFLNNM-PSYGCQP-NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ L + + + + M G PN + YN ++ C +D
Sbjct: 353 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT--PNSLSYNPLLHGFCKEKKMDRA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G +PD +TYN + L K+ KV +++ P + T I
Sbjct: 411 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E AI++ + + G+ P + + L+ GL G++ + +F ++
Sbjct: 471 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+LIRG + +A + +++ P + ++ + K + + +Q+ D M
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 210
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N+ P+++ YN ++ LC++ + D+ + +PD +TY ++ E K V
Sbjct: 211 --NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 268
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM +P + I + + AI+ N + G P + N++L
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
+ + GR D + +ML +
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRK 350
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 5/249 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G+ +A++ F M+E + P +LAY L L +G VDEA M +
Sbjct: 225 GWGDIGDSEKAHELFQAMLE--QGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRV 282
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + +D +++ D M +N++PN+ YN ++ LC N V+
Sbjct: 283 EPDAFTYSIFIHSYCDADDVQSALRVLDKMRR--YNILPNVFTYNCIIKRLCKNEHVEEA 340
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M+ G PD+ +YN I + +V+ M K+ P + +
Sbjct: 341 YLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKL 400
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RNLGRLSDVRRFAEEMLNRRILI 239
L+ + ++W + + P ++ +V++ G + G+L + ++ E M++ I
Sbjct: 401 LIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPP 460
Query: 240 YDVTMQKLK 248
Y T++ L+
Sbjct: 461 YVTTVEMLR 469
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN+ +A F EM + V+AY + + L + D+ K LR M G N P
Sbjct: 256 KDGNLDDALSLFNEM--EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D+ VK +L++ MV G + P+ I Y++++ C N + +
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARG--IAPDTITYSSLIDGFCKENRLGEANQM 371
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D MV G P+ +TY+++ K K+V F E+ + T +
Sbjct: 372 LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----I 239
+ + A E++ ++ G+ P + +LL GL + G L E+M R++ I
Sbjct: 432 SGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI 491
Query: 240 YDVTMQKLKKA 250
Y++ + + A
Sbjct: 492 YNIIIHGMCNA 502
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 103/239 (43%), Gaps = 14/239 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN A F +M ER V+ Y + +L + +D+AL M+ +
Sbjct: 221 KSGNTALALDLFRKMEER--SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKAD 278
Query: 64 LKFFSNALDILVKLNDSTHTVQLWD-----IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+ +S+ + L ND WD + IG N++PN++ ++A++ + +
Sbjct: 279 VVAYSSIIGGLC--NDGR-----WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+++MV G PD++TY+ + + K ++ E M+ +P + + I
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A + + ++ I G++ + N L+ G G+L+ + +EM++R +
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ V L D MV + + PN++ N ++ LC V D+MV +G + +TY
Sbjct: 156 SEAVALVDRMVEMKYR--PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ + K+ + F +M + + + + + I L + A+ ++N +
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GI + + ++ GL N GR D + EM+ R I+ VT L F E +
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G +G V EA MV+ E N + Y L + + AL R M+ +
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANE---ITYGPVLNRMCKSGNTALALDLFRKMEERS 239
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
++ +S +D L K + + L++ M G +++ Y++++G LCN+ D+
Sbjct: 240 IKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIK--ADVVAYSSIIGGLCNDGRWDD 297
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ P+ +T++ + + +K K+ E + ++EM+ P + ++ I
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ A ++ + ++ G P + ++L+ R+ + R E+ ++ ++
Sbjct: 358 GFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417
Query: 240 YDVTMQKLKKAFYNESR 256
VT L + F +
Sbjct: 418 DTVTYNTLVQGFCQSGK 434
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F EMV R P V+ Y L L ++ +AL+ M
Sbjct: 428 GFCQSGKLNVAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELQKALEIFEKM----- 480
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
Q +++GIG +YN ++ +CN + VD+
Sbjct: 481 ------------------------QKSRMILGIG--------IYNIIIHGMCNASKVDDA 508
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ F + G PD LTYN++ L K + E + F +M ++ P+
Sbjct: 509 WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 39/256 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V EA MVE ++ P +V+ T + L +V EAL + M C
Sbjct: 148 GFCLEGRVSEAVALVDRMVE-MKYRP-NVVTVNTLINGLCLKGRVTEALVLIDRMVKYGC 205
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ L+ + K ++ + L+ M ++ +++ Y+ V+ LC + ++D+
Sbjct: 206 EANEITYGPVLNRMCKSGNTALALDLFRKMEE--RSIKASVVQYSIVIDSLCKDGNLDDA 263
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G D + Y+ I L + + + EMI P +
Sbjct: 264 LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN----VVTFSA 319
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L+D E G+L + + EM+ R I
Sbjct: 320 LIDVFVKE-------------------------------GKLLEAKELYNEMVARGIAPD 348
Query: 241 DVTMQKLKKAFYNESR 256
+T L F E+R
Sbjct: 349 TITYSSLIDGFCKENR 364
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
++VEA + EM E +P V+ Y + + L + VDEA++ L MK +N P +
Sbjct: 235 SIVEAKELLQEM-ETKGCSPS-VVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFT 292
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S+ +D K S+ + ++M I L PN+I Y+ ++ LCN ++ FD+
Sbjct: 293 YSSLMDGFCKTGHSSRARDILELM--IQKRLRPNMISYSTLLNGLCNEGKINEALEIFDR 350
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT----PLNCAT---AIT 179
M G PD+ Y I CL + E NF EM+ +P L+ T I
Sbjct: 351 MKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIH 410
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A +++ +L GI + N LL N L R +EM+
Sbjct: 411 GLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMV 464
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 27 EHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCFPTLKFFSNALDILVKLNDSTH 82
E + E L+++ R ++ + L +RV M+ +C PT K + + L ILV+ N
Sbjct: 108 EKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKS 167
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLC-NNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ + M +G + P + N ++ C N+ +D F M HG PDS TY
Sbjct: 168 AFRFYRDMRKMG--IPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGT 225
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L + + + E + EM P+ + + I L + + A+ + + +
Sbjct: 226 LINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKN 285
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
I P + + L+ G G S R E M+ +R+ ++ L NE +
Sbjct: 286 IEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGK 340
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+ A M+++ P ++++Y T L L +++EAL+ MK +
Sbjct: 299 GFCKTGHSSRARDILELMIQK-RLRP-NMISYSTLLNGLCNEGKINEALEIFDRMKLQGF 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM-------YNAVVGLLCN 113
P + ++ L ++ D MV G PN I +N V+ LC
Sbjct: 357 KPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIK--PNRITWSLHVRTHNRVIHGLCT 414
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP---- 169
N+ + F+ + ++ G T+N + +C K + + EM+ N P
Sbjct: 415 INNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEM 474
Query: 170 --TPLNC 174
T +NC
Sbjct: 475 WSTMVNC 481
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L +N+S QL+ ++ G ++ + +N+++ CN D+ R D+MV +G
Sbjct: 412 LCTINNSNRAFQLYLSVLTRGISITVD--TFNSLLKCFCNKKDLPKTSRILDEMVINGCI 469
Query: 134 PDSLTYNMIFECLIKNKKV 152
P ++ + C +K
Sbjct: 470 PQGEMWSTMVNCFCDERKA 488
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 7/239 (2%)
Query: 19 VERFEWNPEHVL-----AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+E F PE Y T + L + +++DEA+ L M+ E C P+ ++ +D
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L K D T +L D M G +PN + YN ++ LC +D ++MV
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+ +TY + L+K ++ + M + + + I+ L + E A+ +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
W + E G P +VL+ GL G+ ++ + M+ L T L K F+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 3/215 (1%)
Query: 46 DEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG--IGFNLMPNLI 102
D+A+ M E C ++K F++ L++++ ++ +D +V + N+ PN +
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N V+ LC VD F M PD TY + + L K +++ E EM
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P+P+ I L + ++ + + G +P E + N L+ GL G+L
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
E M++ + + DVT L + R+
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG EA + +M E+ +++ Y + L R + +EA + L M C
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEK--GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + K VQ+W M G + N Y+ ++ LC V
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR--NKFCYSVLIDGLCGVGRVKEA 486
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M+ G PD++ Y+ I + L + +HEM+ E +P +
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE-EPKSQPDVVTYNI 545
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV-RRFAEEMLNR 235
LLD + A+++ N +L+ G P + N L L D R F EE++ R
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G++ K M + P V Y T + L ++D+A+ L M C
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLK-GCVPNEV-TYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LVK +T V+L M G++L N +Y+ ++ L +
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL--NQHIYSVLISGLFKEGKAEEA 381
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G P+ + Y+++ + L + K +E + + MI + P ++ +
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E A+++W + + G + +VL+ GL +GR+ + +ML
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 15/278 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
++K G+VVE K +G ++P V+ Y T + + ++ +A L+ M +
Sbjct: 245 FQKAGDVVEDMKAWG-------FSPS-VITYNTIIDGYCKAGKMFKADALLKEMVAKRIH 296
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P F+ +D + + T ++++ M G L PN++ YN+++ LC+N +D
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQG--LQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+ +TYN + K K + E ++ K P + T I
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRI 237
A + A + + +L+ G+ P ++ N L+VG G + + R+ A+EM L +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 238 LIYDVTMQKL-KKAFYNESRSMRDRFDSLERRWKTSQM 274
+ Y++ + L KK ++ + D +E++ + + +
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 11/249 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++ NV A K F EM +R P +V+ Y + + L ++DEAL M G
Sbjct: 308 GFCRDENVTAAKKVFEEM-QRQGLQP-NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ K ++ D + G L PN+I +N ++ +D+
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG--LAPNVITFNTLIDAYGKAGRMDDA 423
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G P+ TYN + + V E EM N + + +
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 181 LLDADEPEFAIEIWNYIL---ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L E A+ + + + + G + NVL+ G N G+L + R EML + +
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543
Query: 238 L----IYDV 242
+ YD+
Sbjct: 544 IPNRTTYDI 552
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 5/201 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + K + EA + L + P + F+ +D K L
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M+ G + PN+ YN ++ C +V + +M +G D +TYN++ + L
Sbjct: 428 SMMLDTG--VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDADEPEFAIEIWNYILENGILP 204
K + + EM E + N T I + + E A + N +LE G++P
Sbjct: 486 KKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
Query: 205 LEASANVLLVGLRNLGRLSDV 225
+ ++L + G + D+
Sbjct: 546 NRTTYDILRDEMMEKGFIPDI 566
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y ++ R V EA K + M+G L ++ +D L K ++ V+L
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 88 DIMVGIGFNLM------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
D M LM N++ YN ++ CN ++ R ++M+ G P+ TY++
Sbjct: 498 DEMT-----LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 552
Query: 142 IFECLIKNKKVHEVENFFH 160
+ + +++ + +++ +
Sbjct: 553 LRDEMMEKGFIPDIDGHLY 571
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 5/166 (3%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N++ ++ V+ LC + M G P +TYN I + K K+ + +
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM+ P + I + A +++ + G+ P + N L+ GL +
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 220 GRLSDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSMRD 260
G+L + ++M L ++ Y+ + KK E+R M D
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + + +Q+ +A+ L MK PT+ F + + L +LN + +Q++ M
Sbjct: 55 YGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM- 113
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
I + P+ +Y V+G LC N +D +F++MV G PD +TY ++ L K K
Sbjct: 114 -IDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACK 172
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ F EM+ P + AT + A + A+ + + G P + +
Sbjct: 173 WEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYST 232
Query: 212 LLVGLRNLGRLSDVRRFAEEMLN--RRILIYDVTMQKLKKA 250
L+ GL R + R E + +++Y + L KA
Sbjct: 233 LIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKA 273
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+ ++ F EM+ + +PE ++ Y T + + ++D+AL +R +KG P+ +S
Sbjct: 175 QGHQIFEEMLSKGH-SPE-LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYST 232
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + +L+++ G + ++I+Y + + LC +D +M+
Sbjct: 233 LIDGLCKHDRHDEARELFEMAAGD----VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIE 288
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD ++YN+I L K+ +V E + + ++ + P C + L + E
Sbjct: 289 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 348
Query: 190 AIEIWNYILENG-ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A I +LE G P + + ++ GL RL D ++M + VT +
Sbjct: 349 ACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAII 408
Query: 249 KAFYNESR--SMRDRFDSLERR 268
AF R R+ F + R
Sbjct: 409 DAFCKVGRLDEARELFQRMHER 430
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 95/241 (39%), Gaps = 3/241 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E+ E + + V+ Y +F+ L + ++DEA M C P ++ + L K
Sbjct: 248 ELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 307
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG-AFPD 135
N + +L D + MP + + +V LC + V+ ++M+ G P
Sbjct: 308 DNRVSEAKELMD--QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPS 365
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TY+ + + L K ++ + +M + P + I + A E++
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 425
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ E G + N+L+ G ++ + EEM R I V++ + ES
Sbjct: 426 RMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKES 485
Query: 256 R 256
R
Sbjct: 486 R 486
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 5/188 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGENCFP 62
K+ V EA + + +ER + P V + L + ++V+EA L R+++ + P
Sbjct: 307 KDNRVSEAKELMDQAMER-KCMP-GVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +S +D L K + + M G +P+++ Y A++ C +D
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAG--CVPDVVTYTAIIDAFCKVGRLDEARE 422
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +M G D + YN++ + KV E EM QP ++ +T + L
Sbjct: 423 LFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC 482
Query: 183 DADEPEFA 190
E A
Sbjct: 483 KESRVEEA 490
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 2/174 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y ++ C + +M G P +T+ + L + +
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
FH+MI + +P I L ++ + A + ++++G LP + + VL+ L
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ + EEML++ VT + + R D+ SL RR K +
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRI--DQALSLMRRLKGT 221
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 7/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + +A + G M E P+ + Y + + K +A KFL M +C
Sbjct: 19 GLCRSNQLEKARQLLGRMKE-MGCVPDDAI-YNALISGYSKAKDFGQAFKFLAEMVKNHC 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++N +D L K + V+L D M G + PN+ YN +V LC +D
Sbjct: 77 LPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCS--PNIYTYNVIVEGLCEERKLDEA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G FPD +TYN + L K +V E F M P ++ T I
Sbjct: 135 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVING 191
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + + + A + + + G P + + L+ G G + + ML
Sbjct: 192 LCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +E + EA K EM R + P+ V+ Y +F+ L + +VDEA KFL M
Sbjct: 124 GLCEERKLDEAKKMLEEMAVR-GYFPD-VVTYNSFIKGLCKCDRVDEARKFLARMP---V 178
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ L K D ++ D M G P+++ Y++++ C +V+
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT--PDVVTYSSLIDGFCKGGEVERA 236
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ G P+ + YN + L + + + E+ EM + + P ++ I
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
L A+ + A +++ ++E G P +S ++L+ L L D E+ +
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356
Query: 237 ILIYDVTMQKLKKA 250
IL+Y V + L K
Sbjct: 357 ILLYTVLLDGLCKG 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 7/235 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +A K EM R + ++ Y + L +++DEA K L M
Sbjct: 89 GLCKAGRTKDAVKLLDEM--RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 146
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +++ + L K + + M + P+++ Y V+ LC + D+D+
Sbjct: 147 FPDVVTYNSFIKGLCKCDRVDEARKFLARM-----PVTPDVVSYTTVINGLCKSGDLDSA 201
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R DQM G PD +TY+ + + K +V M+K +P + + +
Sbjct: 202 SRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 261
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L A ++ + G P S N + GL R+ + + M+ R
Sbjct: 262 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P+ + ++ LC +N ++ + +M G PD YN + K K +
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F EM+KN PT + + L A + A+++ + + + G P + NV++ G
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L +L + ++ EEM R
Sbjct: 125 LCEERKLDEAKKMLEEMAVR 144
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLND 79
R ++ +L Y L L +G + DEA F +V+ + C P + F++ LD K
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 408
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+Q+ M+ N++ +N +V LC ++ + + MV G PD +TY
Sbjct: 409 IDKALQIHKQMLE---RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 465
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA--------I 191
+ + + K K F E +K P + + IT L+ + E A +
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDV 525
Query: 192 EIWNYIL----ENG 201
+WN ++ ENG
Sbjct: 526 ALWNAMILGYAENG 539
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
M ++C P F+ L L + N QL M +G +P+ +YNA++
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMG--CVPDDAIYNALISGYSKA 58
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
D F+F +MV + P +TY I + L K + + EM P
Sbjct: 59 KDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY 118
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-L 233
+ L + + + A ++ + G P + N + GL R+ + R+F M +
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV 178
Query: 234 NRRILIYDVTMQKLKKAFYNESRS 257
++ Y + L K+ +S S
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSAS 202
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V A M+ + P +++AY + L L R + +A L M+
Sbjct: 226 GFCKGGEVERAMGLLDSML-KLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K ++D MV G PN Y+ +V LC ++D+
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT--PNASSYSMLVEELCKKKELDDA 341
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAIT 179
+Q D L Y ++ + L K + E F +++ + +P +
Sbjct: 342 ITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 401
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A++I +LE + + N+L+ GL RLSD AE ML
Sbjct: 402 SHCKRRQIDKALQIHKQMLERNCCNV-VTWNILVHGLCVDDRLSD----AETML 450
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + EA F EMV R + V++Y T + L + AL+ LR M+ + C P L
Sbjct: 175 EGEIKEAVGLFNEMVRR--GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ +D L K + L MV G + P+++ Y+ ++ C+ ++ F
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRG--IPPDVVTYSTILHGFCSLGHLNEATILF 290
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++MV P+++T+ ++ + L K V E F M K +P A L+D
Sbjct: 291 NEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN----AYTYNALMDG 346
Query: 185 ----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
++ + A ++ + +++ G P+ S N+L+ G RL + + EM + +
Sbjct: 347 YCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPD 406
Query: 241 DVTMQKLKKAFYNESR 256
VT L + R
Sbjct: 407 TVTYSTLMQGLCQVGR 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V +A EMV+R P V+ Y T L ++EA M G N P
Sbjct: 244 KDTLVNDAMDLLSEMVDR--GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ +D L K + +++ M G PN YNA++ C NN +D +
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE--PNAYTYNALMDGYCLNNQMDEAQKV 359
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D MV G P +YN++ K +++ E ++ EM + E P + +T + L
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQ 419
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P+ A+ ++ + +G+LP + + LL GL G L + + + M +I
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 35/280 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V EA F M ++ + Y + Q+DEA K L +M + C
Sbjct: 311 GLCKEGMVSEARCVFEAMTKK--GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
Query: 61 FPTLKFFS-------------NALDILVKLND---STHTVQLWDIMVGI----------- 93
P + ++ A +LV++++ + TV +M G+
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 94 ------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L+P+L+ Y+ ++ LC + +D + M PD + YN++ E +
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ + F ++ + QPT I LL + A E++ + ++G LP
Sbjct: 489 IAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSC 548
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
S NV++ G S R +EM+ +R T Q L
Sbjct: 549 SYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQML 588
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 110/268 (41%), Gaps = 11/268 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
N + + NP V+ + FL ++ + KQ + M +
Sbjct: 69 NSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVY 128
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ ++ L +LN + + M +G + P+ I +N ++ C ++ F+
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLG--IQPDAITFNTLINGRCIEGEIKEAVGLFN 186
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G PD ++Y+ + L K+ +M + +P + T I L
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
A+++ + +++ GI P + + +L G +LG L++ EM+ R ++ VT
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306
Query: 246 KL-----KKAFYNESRSMRDRFDSLERR 268
L K+ +E+R + F+++ ++
Sbjct: 307 ILVDGLCKEGMVSEARCV---FEAMTKK 331
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ EA K M E + P+ VL Y + + +++ A + + +
Sbjct: 451 GLCKHGHLDEALKLLKSMQES-KIEPDIVL-YNILIEGMFIAGKLEVAKELFSKLFADGI 508
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT++ ++ + L+K S +L+ M GF +PN YN ++ N D
Sbjct: 509 QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF--LPNSCSYNVIIQGFLQNQDSSTA 566
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE 144
R D+MV DS T+ M+ +
Sbjct: 567 IRLIDEMVGKRFSADSSTFQMLLD 590
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA M+E+ E P+ +Y+ + L + ++D A+ + M C P +
Sbjct: 326 GRIDEAISVLKVMIEK-ELTPD-TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 383
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ L L K ++ +++++ + G+G PN+ YN ++ L + D
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMG--CPPNVSSYNTMISALWSCGDRSRALGMVP 441
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ G PD +TYN + CL ++ V E +M ++ ++PT ++ + L
Sbjct: 442 AMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 501
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ AI ++ ++E G P E + +L+ G+ G ++ A + +R ++ D + +
Sbjct: 502 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQD-SFK 560
Query: 246 KLKKAF 251
+L K F
Sbjct: 561 RLNKTF 566
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A + M R + P+ ++ Y + +L +++ ALK L + +NC
Sbjct: 146 GFCKVNRIEAATQVLNRMKAR-GFLPD-IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L + M+ G L+P++ YNA++ +C V+
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARG--LLPDMYTYNAIIRGMCKEGMVERA 261
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ G PD ++YN++ + K E E EM +P + + I+
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 321
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + AI + ++E + P S + L+ L GRL
Sbjct: 322 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 105/245 (42%), Gaps = 18/245 (7%)
Query: 23 EWNPEHVLAY---ETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
E P H+ +Y ET L+ L+ + + +E+L FL + + P + + +
Sbjct: 55 EARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFF 114
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ +I+ + P++ YNAV+ C N ++ + ++M G PD
Sbjct: 115 NFKNIEKASRVMEILES---HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPD 171
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AI 191
+TYN++ L +K+ +++ + PT T+L++A E A+
Sbjct: 172 IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPT----VITYTILIEATIVEGGINEAM 227
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++ +L G+LP + N ++ G+ G + + ++ ++ L +AF
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAF 287
Query: 252 YNESR 256
N+ +
Sbjct: 288 LNQGK 292
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 93/243 (38%), Gaps = 4/243 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + EA K EM+ R + Y + + + V+ A + + + + C P +
Sbjct: 220 EGGINEAMKLLEEMLARGLL--PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDV 277
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L + +L M G PN + Y+ ++ LC +D
Sbjct: 278 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE--PNKVTYSILISSLCRFGRIDEAISVL 335
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M+ PD+ +Y+ + L K ++ MI N P +N T + L
Sbjct: 336 KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 395
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
A+EI+N + G P +S N ++ L + G S M+++ + ++T
Sbjct: 396 GNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITY 455
Query: 245 QKL 247
L
Sbjct: 456 NSL 458
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/228 (16%), Positives = 86/228 (37%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V AY + + +++ A + L MK P + ++ + L +++ D
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLD 196
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ + N MP +I Y ++ ++ + ++M+ G PD TYN I + K
Sbjct: 197 QL--LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V + +P ++ + L+ + + ++ + G P + +
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++L+ L GR+ + + M+ + + + L A E R
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + +A K EM++ PE+ Y + T + VDEA M +
Sbjct: 175 GWCRVRDPKKAMKLLEEMIQAGH-KPEN-FTYCAAIDTFCQAGMVDEAADLFEFMITKGS 232
Query: 61 F---PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K F+ + L K + + +L M+ G +P++ Y V+ +C V
Sbjct: 233 VVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG--CLPDVSTYKDVIEGMCMAGKV 290
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++F D+M G PD +TYN L +N+K E + M+++ P+
Sbjct: 291 EEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNML 350
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + D+P+ A W + E + + V++ GL + R + EE++N+ +
Sbjct: 351 ISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGL 410
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L KA + S M+ ++ S+ RR+ S+
Sbjct: 411 KLPYRAFDSFLMRLSTVGNLKAIHKLSEHMKKFYNHSMARRFALSE 456
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A F + ++ F + P V+ Y T + L R +VD+ K L M G C
Sbjct: 10 GLCKAGRVCDAFTAFRKAIQ-FGFRPT-VVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGC 67
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L+ + L + M G P LI + ++ LC +++
Sbjct: 68 APNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCP--PELITFGLIIKGLCKEGEIEAA 125
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+MV G PD + ++ L + +V E FF +++ + P + T +
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L A E A + + E+ P + + + GL G L+ F + M ++
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Query: 237 ILIYDVTMQKLKKA 250
+ YD + L KA
Sbjct: 246 TVTYDALIDGLCKA 259
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA F +M R E HV+AY + L + ++DEA +FL M
Sbjct: 692 GLCKAGRVTEALGYFEKMA-RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS ++ L ++L+ M G ++ YNA++ C +
Sbjct: 751 IPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCK--ADIYAYNAMINAYCLKGEFSAA 808
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M HG +++T+ ++ + L N ++ E ++FH + ++ N T IT
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYN--TLITS 866
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L+ + E A+E+ ++ +G P + ++ GL G + +EM +R
Sbjct: 867 LVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD 926
Query: 237 ILIYDVTMQKLKKA 250
+ Y + + L KA
Sbjct: 927 LRTYTIMISGLSKA 940
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A M+E +P+ V+ + + L L + +++ +A + C
Sbjct: 482 GLSKSGMVRDALGLLEFMIES-GLSPD-VITFNSVLDGLCKEQRILDAHNVFKRALERGC 539
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K+ +QL MV +G N + Y+ VV L +++
Sbjct: 540 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR--ANTVTYSTVVDGLLKVGRMEDA 597
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G PD++TYN + + K +++ E EM++ + P+ + T
Sbjct: 598 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 657
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-----LNR 235
L + + A+EI +Y+ G P + + ++ GL GR+++ + E+M +
Sbjct: 658 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717
Query: 236 RILIYDVTMQKLKKA 250
++ Y + L KA
Sbjct: 718 HVIAYSALIDGLCKA 732
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ A + F M + +P V Y+ + L + ++D AL LR +N
Sbjct: 220 GLSKAGNLTGAYEFFDSMPQT-GVSPNTV-TYDALIDGLCKAGKLDIALGLLR---DKNS 274
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ FS+ L L + + +QL M +PN++ +N+++ LC VD
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAM-----PCVPNVVCFNSLMNGLCQARRVDEA 329
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAIT 179
F FD M G D +TYN++ + L K +++ E M + E P + +T I
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQ 389
Query: 180 MLLDADEPEFAIEIWNYILE-NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L +A A E++ ++ GI P + LL GL G + + E+ML R
Sbjct: 390 GLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILV 75
E++ R E +V+ + T + L +V++A + + R++ E P ++ L+ L
Sbjct: 369 ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLC 428
Query: 76 KLNDSTHTVQLWDIMVG---------------IGFNLM----PNLIMYNAVVGLLCNNND 116
K DS Q ++ M+ + F ++ P L+ YN +V L +
Sbjct: 429 KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V + + M+ G PD +T+N + + L K +++ + N F ++ +P + +T
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 548
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L + + A+++ ++E G + + ++ GL +GR+ D +M +
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608
Query: 237 ILIYDVTMQKLKKAFYNESR 256
L VT L F+ R
Sbjct: 609 CLPDAVTYNTLIDGFFKRQR 628
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%)
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ YN ++ LC V + F F + + G P +TY+ + + L ++ +V +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM P + T + LL + A + + NG P + +++ GL G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 221 RLSDVRRFAEEMLNR 235
+ R +EM++R
Sbjct: 121 EIEAAFRVVDEMVDR 135
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
++DEA+ + + E+C + + + + LV S ++L MV G + P+
Sbjct: 839 RIDEAVSYFHSIP-EDCRDEISY-NTLITSLVASRRSEQALELLRAMVADGGS--PDACN 894
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y V+ L + + +M G PD TY ++ L K K++ ++F EM+
Sbjct: 895 YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ +P + ++ I AD+ + A W + +GI P
Sbjct: 955 RKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEP 992
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 8/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
GW A F EMVER HV Y + L RG + A + L M K
Sbjct: 240 GWAVVKKPENARSLFDEMVERGVELDVHV--YNALIDALCRGGDITSAQEQLSNMQKSHG 297
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + L D +++ D M L PN+ YNAV+ LLC+ +++
Sbjct: 298 LVPNAATYGPFLHAACASKDVRAALRVLDRM--HTHALTPNVFTYNAVIRLLCDLGEINE 355
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ D++ G PD +YN + K K+V++ M K P + +
Sbjct: 356 AYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLK 415
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN-LGRLSDVRRFAEEMLNRRIL 238
ML+ + AIE+W+ + + G P A+ V++ GL + GR D + M++ I
Sbjct: 416 MLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIP 475
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
Y T + L+ +RD+ L R + S
Sbjct: 476 PYQATCEVLRDRLL--MLGLRDQLGVLTDRMRRS 507
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA EM + + + + + + ++ EA++ R M + C
Sbjct: 427 GFCKLGKIDEAYNLLNEMSA--DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F++ + L ++++ H + L M+ G ++ N + YN ++ ++
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG--VVANTVTYNTLINAFLRRGEIKEA 542
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++MVF G+ D +TYN + + L + +V + + F +M+++ P+ ++C I
Sbjct: 543 RKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILING 602
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRR 236
L + E A+E ++ G P + N L+ GL GR+ D R+ E +
Sbjct: 603 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 662
Query: 237 ILIYDVTMQKLKKAFY 252
+ Y+ M L K +
Sbjct: 663 TVTYNTLMSWLCKGGF 678
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+C PT K ++ L+ILV N H V + + P L + V+ LC N+VD
Sbjct: 171 SCEPTFKSYNVVLEILVSGN--CHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVD 228
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ M HG P+S+ Y + L K +V+E EM P I
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
L D A ++ N +L G P + + L+ GL +GR+ +
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK 336
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 40/269 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A +MV + P+ V Y + + + V AL+ LR M+ + C
Sbjct: 356 GFVTHGRLDDAKAVLSDMVTSYGIVPD-VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC 414
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PN+ Y +V C +D
Sbjct: 415 -------------------------------------KPNVYSYTILVDGFCKLGKIDEA 437
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G P+++ +N + K ++ E F EM + +P + I+
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + DE + A+ + ++ G++ + N L+ G + + R+ EM+ + L+
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 241 DVTMQKLKKAF--YNESRSMRDRFDSLER 267
++T L K E R F+ + R
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLR 586
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 4/228 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE + EA + F EM R P+ V + + + L ++ AL LR M E
Sbjct: 465 KEHRIPEAVEIFREM-PRKGCKPD-VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ ++ + +L + MV G L + I YN+++ LC +VD
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL--DEITYNSLIKGLCRAGEVDKARSL 580
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M+ G P S++ N++ L ++ V E F EM+ P + + I L
Sbjct: 581 FEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 640
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
A E + ++ + GI P + N L+ L G + D +E
Sbjct: 641 AGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE 688
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 9/206 (4%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F +M+ R P + + + L +VD AL LR M C P +
Sbjct: 195 AANVFYDMLSR--KIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTL 252
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ L K N +QL + M +G +P+ +N V+ LC + ++ + ++M+
Sbjct: 253 IHSLSKCNRVNEALQLLEEMFLMG--CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 310
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G PD +TY + L K +V ++ F+ + K PT + T I + + A
Sbjct: 311 GFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDA 366
Query: 191 IEIWNYILEN-GILPLEASANVLLVG 215
+ + ++ + GI+P + N L+ G
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYG 392
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA K EMV F+ + + Y + + L R +VD+A M + P+
Sbjct: 535 RRGEIKEARKLVNEMV--FQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L + V+ MV G P+++ +N+++ LC +++
Sbjct: 593 SISCNILINGLCRSGMVEEAVEFQKEMVLRGST--PDIVTFNSLINGLCRAGRIEDGLTM 650
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F ++ G PD++TYN + L K V++ E I++ + P
Sbjct: 651 FRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 696
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 62/162 (38%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++ P YN V+ +L + N F M+ P T+ ++ + L +V
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ +M K+ P + T I L + A+++ + G +P + N +++
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GL R+++ + ML R D+T L R
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGR 331
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA F EM E+ +PE +Y + + ++ D AL+ M C P+
Sbjct: 367 GRLDEALAVFDEMKEK-GISPEQ-YSYNSLISGFLKADMFDRALELFNHMNA--CGPSPN 422
Query: 66 FFSNALDI--LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ L I K S +Q ++ M G ++P++ NAV+ L + + R
Sbjct: 423 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKG--IVPDVAAANAVLSSLARSGRLGMAKRV 480
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G PD++TY M+ +C K K E NFF +M++ P L + I L
Sbjct: 481 FYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYK 540
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILI 239
+ A ++++ + E I P + N LL GL G++ +V EEM + ++
Sbjct: 541 GGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLIT 600
Query: 240 YDVTMQKLKK 249
Y+ + L K
Sbjct: 601 YNTVLDCLSK 610
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + G+M E P+ V+ + + L ++ +A MK + P +
Sbjct: 266 EAYQILGKM-EDSGCKPD-VVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYIT 323
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
LD DS +++W+ MV G+N N++ Y AVV LC +D FD+M
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYN--DNIVSYTAVVDALCQVGRLDEALAVFDEMKE 381
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADE 186
G P+ +YN + +K F+ M N P+P N T + + + +
Sbjct: 382 KGISPEQYSYNSLISGFLKADMFDRALELFNHM--NACGPSP-NGYTHVLFINYYGKSGQ 438
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
AI+ + ++ GI+P A+AN +L L GRL +R E+ + + +T
Sbjct: 439 SLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTM 498
Query: 247 LKKAFYNESRS 257
+ K S++
Sbjct: 499 MIKCCSKASKA 509
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA T E + + + N + ++ + + ++ V+++++F +
Sbjct: 679 KNGLMKEALHTVKEYILKADCNTDKS-SFHSLMEGILNKAGVEKSIEFAENIASRGILLN 737
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F + L K + QL++ G+G +L YN+++ L + N +D
Sbjct: 738 DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTG--SYNSLIRGLVDENLIDIAEDL 795
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M G PD TYN+I + + K+ ++ E+ EM + ++ T + T I+ L+
Sbjct: 796 FTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVK 855
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ E AI+++ ++ G P + LL GL G++ D EML
Sbjct: 856 SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEML 905
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K++++A+ + E PT + LD L+K L++
Sbjct: 844 VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNE 903
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ + +NV + F++MV G PD +Y ++ + L
Sbjct: 904 MLEYGCK--PNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTA 961
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ ++F ++++ +P + I L ++ E A+ ++N + + GI+P +
Sbjct: 962 GRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTY 1021
Query: 210 NVLLVGLRNLGRLSDVRRFAEEML 233
N L++ L G+ S+ + EE+L
Sbjct: 1022 NSLILHLGKAGKASEAAQMYEELL 1045
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 13/278 (4%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K EA F +MVE P+ VLA + + TL +G + +EA K +K P
Sbjct: 504 SKASKADEAMNFFSDMVET-GCVPD-VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEP 561
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T ++ L L + + L + M PNLI YN V+ L N +V+
Sbjct: 562 TNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHP--PNLITYNTVLDCLSKNGEVNCAIG 619
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +YN + LIK ++ E F +M K C + +
Sbjct: 620 MLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVK 679
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ E + YIL+ ++S + L+ G+ N + FAE + +R IL+ D
Sbjct: 680 NGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDF 739
Query: 243 -------TMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ K KKA E+ + ++F L KT
Sbjct: 740 FLCPLIRHLCKHKKAL--EAHQLFNKFKGLGVSLKTGS 775
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ ++ +A M C P ++ L+
Sbjct: 870 MSEGFSPTP---CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIA 926
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ + Q+++ MV G N P++ Y ++ LC +++ +F Q++ G PD +
Sbjct: 927 GNTENVCQIFEKMVEQGIN--PDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLI 984
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
YN++ + L K++++ E F+EM K P + I L A + A +++ +
Sbjct: 985 IYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEEL 1044
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1045 LIKGWKPNVFTYNALIRG 1062
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EA++ + M + P+++ +S + K D + L + M
Sbjct: 181 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G PN+ Y + +L D ++ +M G PD +T+ ++ + L +
Sbjct: 241 ARGVK--PNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGR 298
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M ++ +P + T + D+ + + +EIWN ++ +G S
Sbjct: 299 LSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTA 358
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ L +GRL + +EM + I
Sbjct: 359 VVDALCQVGRLDEALAVFDEMKEKGI 384
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++ + R +M G +TYN I L+K+K++ + +
Sbjct: 806 PDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 865
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL A + A ++N +LE G P N+LL G R
Sbjct: 866 YYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRI 925
Query: 219 LGRLSDVRRFAEEMLNRRI 237
G +V + E+M+ + I
Sbjct: 926 AGNTENVCQIFEKMVEQGI 944
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +V+A F EM+E + P + Y L + + M +
Sbjct: 887 GLLKAGKMVDAENLFNEMLE-YGCKPNCTI-YNILLNGHRIAGNTENVCQIFEKMVEQGI 944
Query: 61 FPTLKFFSNALDILV---KLNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P +K ++ +D L +LND ++ QL ++ L P+LI+YN ++ L +
Sbjct: 945 NPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLEL------GLEPDLIIYNLLIDGLGKSER 998
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
++ F++M G P+ TYN + L K K E + E++ W+P
Sbjct: 999 IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 72/172 (41%), Gaps = 32/172 (18%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + ++++EA+ MK + P L +++ + L K ++ Q+++
Sbjct: 983 LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD----------------------- 125
++ G+ PN+ YNA++ + DN + +D
Sbjct: 1043 ELLIKGWK--PNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLIN 1100
Query: 126 -------QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+M G PD TYN+I + + K+ ++ E+ E+ ++ Q T
Sbjct: 1101 IAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQLT 1152
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 3/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V EA K F EM+ + E PE V+ Y + ++D AL + M
Sbjct: 117 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVM-YNALIGGYCDQGKLDTALLYRDRMVERGV 175
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L T +L + M G G L P++ YN ++ C +V
Sbjct: 176 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG--LAPDVFTYNILINGHCKEGNVKKA 233
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G +TY + L K +V E + F E ++ +P + I
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A EI + + I P + + N L+ GL LGR+ + R+ +EM R I
Sbjct: 294 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 350
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
V +AL+ M T+ +++ + L K T +L+D V G P+L++Y
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR--PDLVLY 287
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
NA++ + ++D F +M PD +TYN + L +V E EM K
Sbjct: 288 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 347
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
QP + T I+ + + A+ I N ++ G P + N L+ GL G+ D
Sbjct: 348 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 407
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+EM+ I D T L + E
Sbjct: 408 AENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQL 86
+ + Y T + +V AL +R M+ P + + K+ V++
Sbjct: 71 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 130
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + P +MYNA++G C+ +D + D+MV G TYN++ L
Sbjct: 131 FDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ + E EM P I + A+EI+ + G+
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ L G++ + + +E + R I
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVEN 157
PN + YN V+ C+ V +M G P+ TY + K +V E
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129
Query: 158 FFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ K E +P + I D + + A+ + ++E G+ A+ N+L+ L
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189
Query: 217 RNLGRLSDVRRFAEEM 232
GR ++ EEM
Sbjct: 190 FMDGRGTEAYELVEEM 205
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 17 EMVERF-EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
E++E+ + P L Y + L + K++D+AL + M P ++ L L
Sbjct: 101 ELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLC 160
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ L++ MV N PN++ YN ++ LC ++ + F +M G P
Sbjct: 161 QEEKVEEARLLFEKMVKQRIN--PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT 218
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
++YN + + K K + ++ F +M+++ P + T I L + + + A E+ +
Sbjct: 219 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
+++ G+ P A+ + L+ G + R+ + + E+M+ + I + Y++ + L +A
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 337
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +E V EA F +MV++ NP +V+ Y T + L + +++ A + + M G+
Sbjct: 158 GLCQEEKVEEARLLFEKMVKQ-RINP-NVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 215
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT ++ +D K D ++D MV N +PN++ Y ++ L + V
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR--SNCVPNVVTYTTLIDGLSKSGKVQAA 273
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D MV G P+ TY+ + + K ++V E +M+ PT + +
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L AD+ E A +++ + + P + N LL L + +L R EM+ +
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 5/237 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + A + F EM + + P V +Y T + + K + A M NC
Sbjct: 193 GLCKAWRIETAYELFKEMAGK-GYVPTEV-SYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K ++ D MV G + PN+ Y+ ++ C VD
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG--VTPNVATYSCLIDGFCKVRRVDEA 308
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +QMV G P +TYN++ L + K+ + F M + PT + T +
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-LNRR 236
L + + A ++ ++ G P + + L GL G++ + + E+M L +R
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 425
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K + +A T EM R P+ + Y L L + ++V+EA M + P
Sbjct: 126 KTKRIDDALATVEEMATR-GIKPDAFI-YNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ L K +L+ M G G+ +P + YN ++ C D+
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGY--VPTEVSYNTLIDGFCKKKDLVAAKDV 241
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV P+ +TY + + L K+ KV M+K P + I
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A ++ ++ GI P + N+LL L +L D + M RR VT
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361
Query: 244 MQKLKKAFYNESR 256
L +A + +
Sbjct: 362 YNTLLRALCHHKQ 374
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
I Y+ ++ LC N V+ ++M + A PD+LTY I E L K K++ + E
Sbjct: 81 IAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKTKRIDDALATVEE 139
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M +P ++ L ++ E A ++ +++ I P + N L+ GL R
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLER 267
+ +EM + + +V+ L F + + +D FD + R
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + DEA K + M N P + + L K + + DIMV +GF
Sbjct: 163 LCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGF--C 220
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++ +NA++ L CN + +D+ + + M P+ +TY+++ + + ++ E F
Sbjct: 221 PTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAF 280
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++ + P L C + L E + A + E G A+ N L+ G
Sbjct: 281 LEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCK 340
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
LGR+ + R EEM+ L Y V +Q L A
Sbjct: 341 LGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSA 376
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
Q+D A K L M C P +S + ++ + +V G+ PNL++
Sbjct: 238 QMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYA--PNLLV 295
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
NA V LC ++D RF M G ++ TYN + E K ++ E E EMI
Sbjct: 296 CNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMI 355
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFA 190
P + I L A + E A
Sbjct: 356 AEGSLPDSTTYSVLIQGLCSAGQIEHA 382
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 7/233 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V EA + R + P V +Y T + L ++ EA + L+ M
Sbjct: 60 GFSEAGFVDEAKSH----LHRMDCKPNSV-SYNTLIDALCSSGRIQEAREELQAMAKRGV 114
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L K +L +M GF L + +N VV LC + D
Sbjct: 115 APNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFAL--TAVTFNPVVEFLCKSGRPDEA 172
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M+ P+ LT N+I K + E M++ + PT + + +
Sbjct: 173 CKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLEL 232
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ D+ + A ++ + + P + ++++ +GR+ + R F E+++
Sbjct: 233 FCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLV 285
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 9/209 (4%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDEA L M +C P ++ +D L + M G + PN + Y
Sbjct: 67 VDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRG--VAPNRVTY 121
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
NA+ L +D F M G ++T+N + E L K+ + E M+
Sbjct: 122 NAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLL 181
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P L + A PE A+ + + ++E G P + N LL N ++
Sbjct: 182 RNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDS 241
Query: 225 VRRFAEEMLNRRI----LIYDVTMQKLKK 249
+ E M + + + Y + +QK +
Sbjct: 242 AAKLLETMAHSKCKPNFVTYSIMVQKFAE 270
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +VEA + F E + + P ++L ++ L + ++D A +FL VM E C
Sbjct: 272 GRMVEA-RAFLEQLVVCGYAP-NLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTA 329
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+++ ++ KL ++ + M+ G +P+ Y+ ++ LC+ +++ F
Sbjct: 330 TYNSLVEGFCKLGRMDEAERVLEEMIAEGS--LPDSTTYSVLIQGLCSAGQIEHAFMVML 387
Query: 126 QM--VFHGAFPDSLTYNMIFE 144
Q+ A PD T+ + E
Sbjct: 388 QVTRAVESARPDPATFVKLIE 408
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 5/173 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + YN ++ LC++ + M G P+ +TYN + L K + E
Sbjct: 81 PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFEL 140
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M + T + + L + P+ A ++ +L I P + N++L
Sbjct: 141 MGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCK 200
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
R + + M+ VT L + F N D+ DS + +T
Sbjct: 201 AARPEEALGMTDIMVEMGFCPTIVTFNALLELFCN-----TDQMDSAAKLLET 248
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ V EA + EM R E P +V+ Y T + Q+ A L M +N
Sbjct: 159 GLCKDKLVNEAYDLYSEMDAR-EIFP-NVITYNTLICAFCLAGQLMGAFSLLHEMILKNI 216
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS +D L K + + Q++ MV +G N PN+ YN ++ LC VD
Sbjct: 217 NPDVYTFSILIDALCK--EGKNAKQIFHAMVQMGVN--PNVYSYNIMINGLCKCKRVDEA 272
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ PD++TYN + + L K+ ++ N +EM + QP + T
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM-HHRGQPADV---VTYTS 328
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
LLDA + A ++ + E GI P + L+ GL GRL + + + +L +
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 237 ILI----YDVTMQKL-KKAFYNESRSMRDRFD 263
I Y V + L K+ ++E+ +++ + +
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++MY+A++ LC + V+ + + +M FP+ +TYN + ++ +
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDA--DEPEFAIEIWNYILENGILPLEASANVLLVGL 216
HEMI P ++L+DA E + A +I++ +++ G+ P S N+++ GL
Sbjct: 208 LHEMILKNINPD----VYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGL 263
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ + EML++ ++ VT L R
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 89/233 (38%), Gaps = 37/233 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG A + F MV+ NP +V +Y + L + K+VDEA+ LR M +N P
Sbjct: 232 KEGK--NAKQIFHAMVQ-MGVNP-NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 287
Query: 64 LKFFSNALDILVK----------LNDSTHTVQLWDIMVGIGF------------------ 95
+++ +D L K +N+ H Q D++
Sbjct: 288 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 347
Query: 96 -----NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ P + Y A++ LC + N F ++ G D TY ++ L K
Sbjct: 348 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 407
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
E +M N P + I L + DE + A ++ + ++ G+L
Sbjct: 408 MFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ EA K F EM R + Y + L++ ++ +A + M + C
Sbjct: 113 GLGKKKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 170
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + S +D L K V+++ M G L PN ++Y+A++ LC +D
Sbjct: 171 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG--LAPNEVVYSALIHGLCKARKMDCA 228
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM PD++TYN++ + L K+ V FF EM++ +P I+
Sbjct: 229 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISG 288
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
A + A +++ + + P + L+ GL +L+ + + M R
Sbjct: 289 FCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Query: 238 -LIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
+Y + L K+ E M FD +ER
Sbjct: 349 SFVYSSLVDGLCKSGKLEGGCM--LFDEMER 377
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y L L + +++EA+ LR + C P + +++ +D L K S +L+
Sbjct: 69 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFK 128
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L + + Y A++ L + + M G PD +T + + + L K
Sbjct: 129 EMASRGLAL--DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ F M P + + I L A + + A+E+ + + P +
Sbjct: 187 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 246
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEML 233
N+L+ GL G ++ R F +EML
Sbjct: 247 YNILIDGLCKSGDVAAARAFFDEML 271
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 4/202 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + F M R P V+ Y + L + +++D AL+ L MK C
Sbjct: 183 GLCKAGRIGAAVRIFKSMEAR-GLAPNEVV-YSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K D +D M+ G P++ YN ++ C + D
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK--PDVYTYNILISGFCKAGNTDAA 298
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD M P+ +TY + L K +++ + ++ M + P ++ +
Sbjct: 299 CGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDG 358
Query: 181 LLDADEPEFAIEIWNYILENGI 202
L + + E +++ + +G+
Sbjct: 359 LCKSGKLEGGCMLFDEMERSGV 380
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +++A+ E H Y T + L + K++ EA+ + + C
Sbjct: 8 GLVKAGMLIQAHSLAQETTTNGCTIDIHT--YTTIVDWLAKNKKIQEAVALMEKITANGC 65
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ L+ L K+ + L +V G P+++ Y +++ L
Sbjct: 66 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT--PDVVTYTSLIDGLGKKKRSFEA 123
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ F +M G D++ Y + L++ K+ + + + M P + +T I
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A A+ I+ + G+ P E + L+ GL
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 219
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 8/217 (3%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L++ + +A + C + ++ +D L K V L + + G
Sbjct: 9 LVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCT-- 66
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P + YNA++ LC ++ ++V +G PD +TY + + L K K+ E
Sbjct: 67 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL 126
Query: 159 FHEMIKNEWQPTPLNCATA-ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM + C TA I LL A + A ++ + G +P + + ++ GL
Sbjct: 127 FKEMASRGLALDTV-CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 185
Query: 218 NLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
GR+ R + M R + ++Y + L KA
Sbjct: 186 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN A F +M +P +V+ Y T + L + +Q+ +A + + MK C
Sbjct: 288 GFCKAGNTDAACGVFDDMSSS-RCSP-NVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D L K L+D M G + N ++ LC N VD
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG---VANSQTRTRLIFHLCKANRVDEA 402
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
F+ + G P YN I LIK+ KV+E + + EM
Sbjct: 403 VSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+GNV +A++ EM + NP+ ++ Y + L + +++ A ++G
Sbjct: 635 GSCKQGNVDKASQLLEEMCIK-GINPD-IVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + T QL + M+ G + P+ +YN ++ C +
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG--VPPDAFIYNVILNFCCKEEKFEKA 750
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G F ++++N + E K+ K+ E + EMI+ ++ P + + I
Sbjct: 751 LDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDH 809
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A A +W + E ++P + LL G N+G +S+V EEM+ + I
Sbjct: 810 NCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPD 869
Query: 241 DVTMQKLKKAFYNESRSM 258
+T + A+ E M
Sbjct: 870 KMTYYVMIDAYCREGNVM 887
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 8/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A + EM+E+ P+ Y + RG+ + A + L MK
Sbjct: 355 GVCKAGKMEKALEIMQEMMEK-GVEPDSQ-TYSLLIEGHCRGQNMARAFELLDEMKKRKL 412
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +S ++ L + + T + MV G L PN ++Y ++ V+
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNG--LKPNAVVYTTLMTAHAKEGRVEES 470
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD YN + K K++ E + EM++ +P I
Sbjct: 471 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
A E E A +N +L G+LP L+ G G +++ +L+RR+L
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590
Query: 239 --IYDVTMQKLKK 249
Y V + L +
Sbjct: 591 VQTYSVLIHGLSR 603
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 5/263 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V E+ M E+ P+ V Y + +I + K+++EA +L M P
Sbjct: 463 KEGRVEESRMILERMREQGIL-PD-VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +D K + + ++ M+ G ++PN+ +Y A++ C +V F
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCG--VLPNVGIYTALIEGHCKEGNVTEAFSV 578
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ D TY+++ L +N K+HE F E+ + P + I+
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A ++ + GI P + N+L+ GL G + + +++ R + VT
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698
Query: 244 MQKLKKAFYNESRSMRDRFDSLE 266
+ Y +S++ F LE
Sbjct: 699 YAAMVDG-YCKSKNPTAAFQLLE 720
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 12/217 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK----QVDEALKFLRVMK 56
G+ K G + A++ F EM+ VL LI G V EA R +
Sbjct: 530 GYSKAGEMEIADRYFNEMLSC------GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 583
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
++ +S + L + ++ + G L+PN YN+++ C +
Sbjct: 584 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG--LLPNAFTYNSLISGSCKQGN 641
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
VD + ++M G PD +TYN++ + L K ++ +N F ++ P + A
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ + P A ++ +L G+ P NV+L
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 103/284 (36%), Gaps = 52/284 (18%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHV---------------LAYETFLITLIRGKQVDEA 48
K GNV +A + EM E+ E + Y+ + K+ EA
Sbjct: 236 KVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA 295
Query: 49 LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV 108
L M P ++ +D ++ D ++ D MV G NLI++N ++
Sbjct: 296 KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE--ANLIIWNTLL 353
Query: 109 GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
+C ++ +M+ G PDS TY+++ E + + + EM K +
Sbjct: 354 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 413
Query: 169 PTPLN--------C-----------------------ATAITMLLDADEPEFAIEIWNYI 197
PT L C A T L+ A E +E I
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473
Query: 198 L----ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L E GILP N L++G R+ + R + EML RR+
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EAN EM+E+ ++ P HV Y + + + + EA + M+ N
Sbjct: 774 GYCKSGKLQEANHLLEEMIEK-QFIPNHV-TYTSLIDHNCKAGMMGEAKRLWLEMQERNV 831
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT K +++ L + + + L++ MV G P+ + Y ++ C +V
Sbjct: 832 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIE--PDKMTYYVMIDAYCREGNVMEA 889
Query: 121 FRFFDQMVFHG 131
+ D+++ G
Sbjct: 890 CKLKDEILVKG 900
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P+L+ N+++G L N V+ ++ FD M H PD TY + K V +
Sbjct: 183 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 242
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ EM + LLD AIE+ +++ G++P + ++L+
Sbjct: 243 AKRVLLEMGEK-------------ARLLDE-----AIELKRSMVDKGLVPDLYTYDILIN 284
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G R + + EM++ + +T L F +
Sbjct: 285 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 325
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+++Y T L L RG +VD A++ L +K + C P L ++ +D L K + ++L +
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L P++I Y+ + LC ++ + F ++ G P+++ YN I L K
Sbjct: 422 EMVTKG--LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ H + F Y++ NG +P E++
Sbjct: 480 RRATHSAIDLF-----------------------------------TYMVSNGCMPNEST 504
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ GL G + + R E+ +R ++
Sbjct: 505 YTILIEGLAYEGLVKEAREMMAELCSRGVV 534
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K +A K EM R + ++ Y + + + +VD+A++FL+ + C P
Sbjct: 199 KRSGYKQAVKLLDEM--RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPN 256
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L L +L M G PN++ +N ++ LC V+
Sbjct: 257 TVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP--PNVVTFNMLISFLCRRGLVEPAMEI 314
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
DQ+ +G P+SL+YN I K KK+ F M+ + P ++ T +T L
Sbjct: 315 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCR 374
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E + A+E+ + + + G P+ S N ++ GL G+ + EM+ + + +T
Sbjct: 375 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIIT 434
Query: 244 MQKLKKAFYNESR 256
+ E R
Sbjct: 435 YSTISSGLCREGR 447
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG + D AL L M C P + ++ L+ K + V+L D M
Sbjct: 157 TLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK 216
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G P+++ YN VV +C VD+ F + +G P++++YN++ + L ++
Sbjct: 217 G--CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ E EM + P + I+ L E A+EI + I + G P S N +L
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 214 VGLRNLGRLSDVRRFAEEMLN 234
++ F E M++
Sbjct: 335 HAFCKQKKMDRAMAFVELMVS 355
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P V +Y L L ++ ++A K + M +
Sbjct: 231 GICQEGRVDDAME-FLKSLPSYGCEPNTV-SYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L + +++ D + G PN + YN ++ C +D
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT--PNSLSYNPILHAFCKQKKMDRA 346
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + MV G +PD ++YN + L + +V H++ P ++ T I
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 406
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L A + E A+E+ N ++ G+ P + + + GL GR+ +
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 80/235 (34%), Gaps = 32/235 (13%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P A L L+R ++EA++ + M G P+ AL + KL S T +
Sbjct: 53 PHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLE--PSAAGPCAAL--IKKLCASGRTAE 108
Query: 86 LWDIMVG-----IGFNLM-----------------------PNLIMYNAVVGLLCNNNDV 117
++ + +N M P+ YN ++ LC
Sbjct: 109 ARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRT 168
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
DN D M+ G PD +TY ++ E K + EM P +
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + + A+E + G P S N++L GL R D + EM
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 283
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW ++ N+++ ++ EM + + P+ V+ Y + + K+ DEA+ M +N
Sbjct: 234 GWSQQQNLLKVDEVCREMKDD-GFQPD-VVTYGIIINAYCKAKKYDEAIGIYHDMLSKNV 291
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + + L + + ++ GF P YNAVV C + +D+
Sbjct: 292 NPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFP--PEAPTYNAVVSAYCWSMRIDDA 349
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM-IKNEWQPTPLNCATAIT 179
+R +M G P++ TY++I LIK + E + F M + +P+ A +
Sbjct: 350 YRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVR 409
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
M + ++ + A+ +WN + + GILP + L++ L + +L D R+ ++ML+
Sbjct: 410 MFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLD 464
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 8/231 (3%)
Query: 40 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLM 98
+R K + EALK M+ P + F+ +D+L K Q L+D M +NL
Sbjct: 165 VRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMR--QWNLE 222
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PNL Y ++ ++ V +M G PD +TY +I K KK E
Sbjct: 223 PNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGI 282
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+H+M+ P+P T IT L + + A E + +G P + N ++
Sbjct: 283 YHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCW 342
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
R+ D R EM + YD+ + L K E+ S+ R S
Sbjct: 343 SMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSS 393
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-NCFPTLKFFS 68
+A + GEM E P + Y+ L+ LI+G + EA + M E C P++ ++
Sbjct: 348 DAYRIVGEMKE-LGIGP-NARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYA 405
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ + N + +W+ M G ++P + M++ ++ LC+ N +D+ R+F QM+
Sbjct: 406 IMVRMFCNENQLDMAMVVWNEMKDKG--ILPGIHMFSTLIISLCHENKLDDACRYFQQML 463
Query: 129 FHGAFPDS 136
G P +
Sbjct: 464 DVGIRPTA 471
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA M+E+ E P+ +Y+ + L + ++D A+ + M C P +
Sbjct: 336 GRIDEAISVLKVMIEK-ELTPD-TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 393
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ L L K ++ +++++ + G+G PN+ YN ++ L + D
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMG--CPPNVSSYNTMISALWSCGDRSRALGMVP 451
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ G PD +TYN + CL ++ V E +M ++ ++PT ++ + L
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ AI ++ ++E G P E + +L+ G+ G ++ A + +R ++ D + +
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQD-SFK 570
Query: 246 KLKKAF 251
+L K F
Sbjct: 571 RLNKTF 576
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A + M R + P+ ++ Y + +L +++ AL L + +NC
Sbjct: 156 GFCKVNQIEAATQVLNRMKAR-GFLPD-IVTYNIMIGSLCNRRKLGLALTVLDQLLLDNC 213
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L + M+ G L+P++ YNA++ +C V+
Sbjct: 214 MPTVITYTILIEATIVEGGINEAMKLLEEMLARG--LLPDMYTYNAIIRGMCKEGMVERA 271
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ G PD ++YN++ + K E E EM +P + + I+
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 331
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + AI + ++E + P S + L+ L GRL
Sbjct: 332 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 2/188 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + I ++EA+K L M P + ++ + + K +L
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G P++I YN ++ N D + +M G P+ +TY+++ L +
Sbjct: 277 SLTSKGCE--PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E + MI+ E P + I+ L + AI I +Y++ NG LP +
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394
Query: 209 ANVLLVGL 216
N +L L
Sbjct: 395 YNTILAAL 402
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 105/245 (42%), Gaps = 18/245 (7%)
Query: 23 EWNPEHVLAY---ETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
E P H+ +Y ET L+ L+ + + +E+L FL + + P + + +
Sbjct: 65 EARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFF 124
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ +I+ + P++ YNAV+ C N ++ + ++M G PD
Sbjct: 125 NFKNIEKASRVMEILES---HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPD 181
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AI 191
+TYN++ L +K+ +++ + PT T+L++A E A+
Sbjct: 182 IVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPT----VITYTILIEATIVEGGINEAM 237
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++ +L G+LP + N ++ G+ G + + ++ ++ L +AF
Sbjct: 238 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAF 297
Query: 252 YNESR 256
N+ +
Sbjct: 298 LNQGK 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 4/243 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + EA K EM+ R + Y + + + V+ A + + + + C P +
Sbjct: 230 EGGINEAMKLLEEMLARGLL--PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDV 287
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L + +L M G PN + Y+ ++ LC +D
Sbjct: 288 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE--PNKVTYSILISSLCRFGRIDEAISVL 345
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M+ PD+ +Y+ + L K ++ MI N P +N T + L
Sbjct: 346 KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 405
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
A+EI+N + G P +S N ++ L + G S M+++ I ++T
Sbjct: 406 GNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITY 465
Query: 245 QKL 247
L
Sbjct: 466 NSL 468
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/228 (17%), Positives = 85/228 (37%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V AY + + Q++ A + L MK P + ++ + L + + D
Sbjct: 147 VFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLD 206
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ + N MP +I Y ++ ++ + ++M+ G PD TYN I + K
Sbjct: 207 QL--LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V + +P ++ + L+ + + ++ + G P + +
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++L+ L GR+ + + M+ + + + L A E R
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
VV A + M +R +P +V+ Y + + L + ++ +A + L M + P + F
Sbjct: 64 VVPALEVLKRMKDR-GISP-NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S +D K + ++ +M+ + + PN+ Y++++ LC +N VD + D M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSID--PNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P+ +TY+ + K+ +V + +M + ++C T I A +
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVT 243
+ A+ ++ Y+ NG++P S N++L GL G + E M R I+ Y +
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 244 MQKLKKA 250
+ + KA
Sbjct: 300 IHGMCKA 306
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 73/161 (45%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN++ Y++++ LC + + + R +M P+ +T++ + + K K+ +V
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ + MI+ P ++ I L + + AI++ + ++ G P + + L G
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 197
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ D + ++M R + V+ L K ++ +
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 65/157 (41%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
++++ ++ LC N V +M G P+ +TY+ + L K+ ++ + E
Sbjct: 47 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 106
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
HEM + P + + I + ++ +++ I P + + L+ GL
Sbjct: 107 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ + + + M+++ VT L F+ SR
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 203
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 4/269 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ EA+ F M E + A+ + L L ++ EA+ L +M +
Sbjct: 367 KSGHASEAHSVFCRMWNSHEKGDRY--AFVSMLEALCNAEKTTEAIDLLHMMPEKGITTD 424
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L KL + L+D M G ++P++ YN ++ VD
Sbjct: 425 VGMYNMIFSALGKLKQVSFMSSLYDTMRANG--VVPDVFTYNIMISSFGRVGLVDKASEL 482
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M PD +TYN + CL KN + E F +M + + P + I
Sbjct: 483 FEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGK 542
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+++ + A +++ ++ G +P + N+LL L G+ ++ +F E + + + +T
Sbjct: 543 SNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSIT 602
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTS 272
L++ R++R R S W S
Sbjct: 603 YSILERLESRSQRTVRIRKPSRNTGWVIS 631
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + VD+A + MK C P ++ + + K +T V L +
Sbjct: 218 IFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLE 277
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI YN V+ L N VD +M+ P+ TY+++ + L
Sbjct: 278 EMVSEGCVL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLST 335
Query: 149 NKKVHEV 155
++H +
Sbjct: 336 GGQLHRL 342
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 9/230 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EMV E +++AY T + L + K VDEA+ L M +C P
Sbjct: 265 KAGKTTKFVSLLEEMVS--EGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPN 322
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S LD+L ++ DI G N +Y+ ++ LC +
Sbjct: 323 QFTYSIMLDVLSTGGQLHRLNEILDICSGC-----LNRPVYSYLIKALCKSGHASEAHSV 377
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-TMLL 182
F +M D + + E L +K E + H M+ + T + I + L
Sbjct: 378 FCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLH-MMPEKGITTDVGMYNMIFSALG 436
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ F +++ + NG++P + N+++ +G + EEM
Sbjct: 437 KLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEM 486
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
VV A + M +R +P +V+ Y + + L + ++ +A + L M + P + F
Sbjct: 209 VVPALEVLKRMKDR-GISP-NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 266
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S +D K + ++ +M+ + + PN+ Y++++ LC +N VD + D M
Sbjct: 267 SALIDAYAKRGKLSKVDSVYKMMIQMSID--PNVFTYSSLIYGLCMHNRVDEAIKMLDLM 324
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P+ +TY+ + K+ +V + +M + ++C T I A +
Sbjct: 325 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 384
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVT 243
+ A+ ++ Y+ NG++P S N++L GL G + E M R I+ Y +
Sbjct: 385 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 444
Query: 244 MQKLKKA 250
+ + KA
Sbjct: 445 IHGMCKA 451
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 73/161 (45%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN++ Y++++ LC + + + R +M P+ +T++ + + K K+ +V
Sbjct: 223 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ + MI+ P ++ I L + + AI++ + ++ G P + + L G
Sbjct: 283 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 342
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ D + ++M R + V+ L K ++ +
Sbjct: 343 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 3/237 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD-IM 90
Y L + + + D+A +M P++ F+ L + K+ + LW I
Sbjct: 53 YREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIE 112
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + P+L N +V C + + +M+ G PD +T + + +
Sbjct: 113 NAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSN 172
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M K + + I L A+E+ + + GI P + +
Sbjct: 173 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 232
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
L+ GL GRL+D R EM +++I +T L A+ R + DS+ +
Sbjct: 233 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY--AKRGKLSKVDSVYK 287
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 93/240 (38%), Gaps = 3/240 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E E E +P+ + + R Q AL +L M P + S+ ++
Sbjct: 112 ENAEGIEISPD-LYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
N V + M +G + ++++ ++ LC N V +M G P+
Sbjct: 171 SNSIKDAVYVAGQMEKMG--IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ + L K+ ++ + E HEM + P + + I + ++
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+++ I P + + L+ GL R+ + + + M+++ VT L F+ SR
Sbjct: 289 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 8/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA EMV++ P V Y L++L EA++ L MK C
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQK-GIEPT-VYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ F+ + L + + L+ M+ G L+P + YNA++ LC +
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTVTYNALINQLCVEGRFETA 396
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F M+ HG+ P + TYN I +C + + F +M+K P + T I
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ + + NG+ P + L+ G G+L M+ I
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
VT + ++N ++ D+L WK
Sbjct: 517 HVTYTAIIDGYFNLAKVD----DALALFWK 542
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V + E+ ++++ + ++ T LI L + VD A M P+L
Sbjct: 144 EGEVKRVTQFLSEINSKYDFGYT-LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ ++IL K +L IM I ++ PN Y +++ C N+++D F
Sbjct: 203 LTFNTMINILCK-KGRVQEAKL--IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G P+S+TY+ + L ++ E + EM++ +PT + L D
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A A+E+ + + G +P + L+ GL G+ +ML ++ VT
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 244 MQKLKKAFYNESR 256
L E R
Sbjct: 380 YNALINQLCVEGR 392
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 4/223 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G++ +A F +M++ + +V+ Y T + + ++ A++ L +MKG P
Sbjct: 426 GDIQKAMVIFDKMLK--AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ + + H L+ M+ G + PN + Y A++ N VD+ F
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGIS--PNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G P S TYN++ K + E ENF +M+K P + + I L
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
A +I++ + + P + + L+ GL GR D +
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L + + A + M P+ + ++ + + D + ++D
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + PN+I YN ++ C +++N R + M +G PD+ TY + +
Sbjct: 437 KMLKAGSS--PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + F+ M+++ P + I + + + A+ ++ ++E+G LP +
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
NV++ G +S+ F +M+ + +L
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLL 584
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 8/223 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K ++ EA G+MV++ +V+ Y +F+ L R + A K M+ N
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLL--PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
FP L +S+ + L + ++++++ + + PN+ Y +V LC
Sbjct: 619 FPNLYTYSSLIYGLCQ-EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677
Query: 120 VFRFFDQMVFHGAFPDSLTYN--MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ M G P Y +I EC KN KV N F+ M +Q +
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGEC--KNLKVESALNIFYSMDTLGFQLHLSDYKAL 735
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
I L + E A I+ +LE E + VLL GL G
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEG 778
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 8/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA EMV++ P V Y L++L EA++ L MK C
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQK-GIEPT-VYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ F+ + L + + L+ M+ G L+P + YNA++ LC +
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG--LVPTTVTYNALINQLCVEGRFETA 396
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F M+ HG+ P + TYN I +C + + F +M+K P + T I
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ + + NG+ P + L+ G G+L M+ I
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
VT + ++N ++ D+L WK
Sbjct: 517 HVTYTAIIDGYFNLAKVD----DALALFWK 542
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V + E+ ++++ + ++ T LI L + VD A M P+L
Sbjct: 144 EGEVKRVTQFLSEINSKYDFGYT-LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ ++IL K +L IM I ++ PN Y +++ C N+++D F
Sbjct: 203 LTFNTMINILCK-KGRVQEAKL--IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G P+S+TY+ + L ++ E + EM++ +PT + L D
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A A+E+ + + G +P + L+ GL G+ +ML ++ VT
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 244 MQKLKKAFYNESR 256
L E R
Sbjct: 380 YNALINQLCVEGR 392
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 4/223 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G++ +A F +M++ + +V+ Y T + + ++ A++ L +MKG P
Sbjct: 426 GDIQKAMVIFDKMLK--AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ + + H L+ M+ G + PN + Y A++ N VD+ F
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGIS--PNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G P S TYN++ K + E ENF +M+K P + + I L
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
A +I++ + + P + + L+ GL GR D +
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L + + A + M P+ + ++ + + D + ++D
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + PN+I YN ++ C +++N R + M +G PD+ TY + +
Sbjct: 437 KMLKAGSS--PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + F+ M+++ P + I + + + A+ ++ ++E+G LP +
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
NV++ G +S+ F +M+ + +L
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLL 584
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K ++ EA G+MV++ +V+ Y +F+ L R + A K M+ N
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLL--PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
FP L +S+ + L + ++++++ + + PN+ Y +V LC
Sbjct: 619 FPNLYTYSSLIYGLCQ-EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677
Query: 120 VFRFFDQMVFHGAFPDSLTYN--MIFECLIKNKKVHEVENFFHEM 162
+ M G P Y +I EC KN KV N F+ M
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGEC--KNLKVESALNIFYSM 720
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+GNV +A++ EM + NP+ ++ Y + L + +++ A ++G
Sbjct: 644 GSCKQGNVDKASQLLEEMCIK-GINPD-IVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + T QL + M+ G + P+ +YN ++ C +
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG--VPPDAFIYNVILNFCCKEEKFEKA 759
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G F ++++N + E K+ K+ E + EMI+ ++ P + + I
Sbjct: 760 LDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDH 818
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A A +W + E ++P + LL G N+G +S+V EEM+ + I
Sbjct: 819 NCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPD 878
Query: 241 DVTMQKLKKAFYNESRSM 258
+T + A+ E M
Sbjct: 879 KMTYYVMIDAYCREGNVM 896
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Query: 2 WEKEGNVVEANKTF-GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K G +VEA F G + FE+ P +L+ + L L++G +V+ K M
Sbjct: 155 YRKMGFLVEAVNVFLGP--KNFEFRPS-LLSCNSLLGDLLKGNKVELFWKVFDGMCAHKV 211
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++N + K+ + ++ M G + PNL+ YN ++G LC +D
Sbjct: 212 LPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCS--PNLVTYNVIIGGLCRARLLDEA 269
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
MV G PD TY+++ K+ E + EMI +P P+ I
Sbjct: 270 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + E A I + ++ GI N LL G+ G++ +EM+ + +
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 74/304 (24%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GNV +A + EM E+ +P +++ Y + L R + +DEA++ R M + P
Sbjct: 227 KVGNVKDAKRVLLEMGEK-GCSP-NLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPD 284
Query: 64 LKFFS----------------------------------NAL-DILVKLNDSTHTVQLWD 88
L + NAL D ++ D ++ D
Sbjct: 285 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 344
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G NLI++N ++ +C ++ +M+ G PDS TY+++ E +
Sbjct: 345 EMVACGIE--ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCR 402
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLN--------C-----------------------ATA 177
+ + EM K + PT L C A
Sbjct: 403 GQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV 462
Query: 178 ITMLLDADEPEFAIEIWNYIL----ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
T L+ A E +E IL E GILP N L++G R+ + R + EML
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522
Query: 234 NRRI 237
RR+
Sbjct: 523 ERRL 526
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 8/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A + EM+E+ P+ Y + RG+ + A + L MK
Sbjct: 364 GVCKAGKMEKALEIMQEMMEK-GVEPDSQ-TYSLLIEGHCRGQNMARAFELLDEMKKRKL 421
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +S ++ L + + T + MV G L PN ++Y ++ V+
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNG--LKPNAVVYTTLMTAHAKEGRVEES 479
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD YN + K K++ E + EM++ +P I
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
A E E A +N +L G+LP L+ G G +++ +L+RR+L
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599
Query: 239 --IYDVTMQKLKK 249
Y V + L +
Sbjct: 600 VQTYSVLIHGLSR 612
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 5/263 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V E+ M E+ P+ V Y + +I + K+++EA +L M P
Sbjct: 472 KEGRVEESRMILERMREQGIL-PD-VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +D K + + ++ M+ G ++PN+ +Y A++ C +V F
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCG--VLPNVGIYTALIEGHCKEGNVTEAFSV 587
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ D TY+++ L +N K+HE F E+ + P + I+
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A ++ + GI P + N+L+ GL G + + +++ R + VT
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707
Query: 244 MQKLKKAFYNESRSMRDRFDSLE 266
+ Y +S++ F LE
Sbjct: 708 YAAMVDG-YCKSKNPTAAFQLLE 729
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 12/217 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK----QVDEALKFLRVMK 56
G+ K G + A++ F EM+ VL LI G V EA R +
Sbjct: 539 GYSKAGEMEIADRYFNEMLSC------GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 592
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
++ +S + L + ++ + G L+PN YN+++ C +
Sbjct: 593 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG--LLPNAFTYNSLISGSCKQGN 650
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
VD + ++M G PD +TYN++ + L K ++ +N F ++ P + A
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ + P A ++ +L G+ P NV+L
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EAN EM+E+ ++ P HV Y + + + + EA + M+ N
Sbjct: 783 GYCKSGKLQEANHLLEEMIEK-QFIPNHV-TYTSLIDHNCKAGMMGEAKRLWLEMQERNV 840
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT K +++ L + + + L++ MV G P+ + Y ++ C +V
Sbjct: 841 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIE--PDKMTYYVMIDAYCREGNVMEA 898
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+++ G Y+ + + L K ++ EV +E+ ++ ++ C+
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A E+ +++ G + S L+ G +N D ++M
Sbjct: 959 FQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P+L+ N+++G L N V+ ++ FD M H PD TY + K V +
Sbjct: 174 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ EM + P + I L A + AIE+ +++ G++P + ++L+
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G R + + EM++ + +T L F +
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 334
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 30 LAYETFLITLIRGKQVDEA---LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
Y T + + + V EA +F+R PT K ++ + LV+ + + +L
Sbjct: 409 FTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKL 468
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
M+ G ++P++ Y V+ +C V+ ++F ++M G PD +TYN + L
Sbjct: 469 IKDMINSG--VLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVL 526
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+NKK E + MI+ P+ I+M + EP+ A E W+ + + G
Sbjct: 527 CENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDT 586
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI----YDVTMQKLK-----KAFYNESRS 257
+ V++ GL N ++ D +E++N+ I + +D + +L +A + S
Sbjct: 587 DTYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEH 646
Query: 258 MRDRFD-SLERRWKTSQ 273
MR ++ ++ RR+ +Q
Sbjct: 647 MRKFYNPAMARRFALNQ 663
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW----QPTPLNCATA 177
R ++M+ G PDS TYN + K V E F E ++ + PT A
Sbjct: 394 RVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELF-EFMRTKGSTMSSPTAKTYAIM 452
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L+ +D E ++ ++ +G+LP ++ ++ G+ G++ + +F EEM N+
Sbjct: 453 ILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNK 510
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y+ + + +V+EA KFL M + P + ++ LD+L + S + L+
Sbjct: 481 VSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYG 540
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G +P++ +N ++ + + D F + +M G D+ TY ++ E L
Sbjct: 541 RMIEAG--CVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFN 598
Query: 149 NKKVHEVENFFHEMI 163
K+ + E++
Sbjct: 599 CNKMEDACFLLDEVV 613
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA + F EM ++ PE +Y + + ++ + +AL+ + M P
Sbjct: 428 GRVFEALEMFDEMKQK-GIVPEQ-YSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGY 485
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ K +S +Q +++M G ++P+++ NAV+ L + + R F
Sbjct: 486 THVLFINYYGKSGESIKAIQRYELMKSKG--IVPDVVAGNAVLFGLAKSGRLGMAKRVFH 543
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
++ G PD++TY M+ +C K K E F++MI+N P L + I L A
Sbjct: 544 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAG 603
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A +I+ + E + P + + N LL GL G++ +V EEM
Sbjct: 604 RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 650
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 4/223 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + EM E P+ V+ + + L ++ +A MK + P +
Sbjct: 327 EAYRILAEM-ENEGCKPD-VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 384
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
LD +S +++W+ M G+N N++ Y AV+ LC V FD+M
Sbjct: 385 LLDKFADNGESQSVMEIWNAMKADGYN--DNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P+ +YN + +K + + F M + +P I + E
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
AI+ + + GI+P + N +L GL GRL +R E+
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 545
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EAL+ +VM + P+++ +S + K D TV LW +
Sbjct: 242 YNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD-VETV-LWLLRE 299
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ PN+ Y + +L D +R +M G PD +T+ ++ + L +
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M K++ +P + T + D E + +EIWN + +G +
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTA 419
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF-DSLE 266
++ L +GR+ + +EM + I+ + L F DRF D+LE
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA-----DRFGDALE 470
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 6/250 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F +M+E P+ VL + + TL + + DEA + +K N PT ++
Sbjct: 572 EAVKIFYDMIEN-NCVPD-VLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNT 629
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L + + L + M N PNLI YN ++ LC N V++ M
Sbjct: 630 LLAGLGREGKVKEVMHLLEEMYH--SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 687
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +YN + L+K ++ +E + F +M K P T + + +
Sbjct: 688 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKE 746
Query: 190 AIEIWN-YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ I Y L+ G +S + L+ G+ FAE + + I + D + L
Sbjct: 747 ALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLI 806
Query: 249 KAFYNESRSM 258
K + +++
Sbjct: 807 KHLCKQKKAL 816
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN+++ L + N +D F +M G PD TYN++ + + K+ ++ E+ EM
Sbjct: 837 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ ++ T + T I+ L+ + E AI+++ ++ G P + LL GL GR+
Sbjct: 897 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956
Query: 224 DVRRFAEEML 233
D EML
Sbjct: 957 DAENLFNEML 966
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ +++++A+ + + PT + LD L+K L++
Sbjct: 905 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G N +YN ++ + + V F MV G PD +Y +I + L K
Sbjct: 965 MLEYGCK--ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ +F ++++ +P + I L + E A+ ++N + + GI+P +
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLTK 1108
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M + F P Y L L++ ++++A M C ++ L+
Sbjct: 931 MSQGFSPTP---CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 987
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ L+ MV G N P++ Y ++ LC +++ +F Q++ G PD +
Sbjct: 988 GNTEKVCHLFQDMVDQGIN--PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1045
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ + L K+K++ E + F+EM K P + I L A + A +++ +
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1106 LTKGWKPNVFTYNALIRG 1123
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 20/219 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV----DEALKFLRVMK 56
G K G + +A F EM+E A T L+ G ++ ++ + M
Sbjct: 948 GLLKAGRIEDAENLFNEMLEY------GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV 1001
Query: 57 GENCFPTLKFFSNALDILVK---LNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
+ P +K ++ +D L K LND T+ QL ++ L P+LI YN ++ L
Sbjct: 1002 DQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM------GLEPDLITYNLLIDGLG 1055
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+ ++ F++M G P+ TYN + L K K E + E++ W+P
Sbjct: 1056 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1115
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
I + + A + ++ G LP ++ ++
Sbjct: 1116 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++ + + ++M G +TYN I L+K++++ + +
Sbjct: 867 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 926
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL A E A ++N +LE G N+LL G R
Sbjct: 927 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 986
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
G V ++M +N I Y + + L KA
Sbjct: 987 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 2/197 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y ++ + + V+ L LR M+ P + ++ + +L + ++
Sbjct: 274 VRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILA 333
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P++I + ++ +LC+ + + F +M PD +TY + +
Sbjct: 334 EMENEGCK--PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFAD 391
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N + V ++ M + + + I L A+E+++ + + GI+P + S
Sbjct: 392 NGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451
Query: 209 ANVLLVGLRNLGRLSDV 225
N L+ G R D
Sbjct: 452 YNSLISGFLKADRFGDA 468
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 4/228 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F EM E P+ Y L + + +++E LK M + T ++
Sbjct: 853 AEGLFAEMKE-LGCGPDE-FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 910
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ LVK + L+ ++ GF+ P Y ++ L +++ F++M+ +
Sbjct: 911 ISGLVKSRRLEQAIDLYYNLMSQGFS--PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 968
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G + YN++ +V + F +M+ P + I L A +
Sbjct: 969 GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 1028
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + +LE G+ P + N+L+ GL RL + EM + I+
Sbjct: 1029 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 4/267 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G + +A + +M + HV + + + +R +++EA+ LR MK ++C
Sbjct: 438 GLCKKGMLEQAVELIHQMKKNRRKLNSHV--FNSLINGYVRAFKLEEAISVLREMKSKDC 495
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K + M+ G L P++I Y+ ++ LC VD
Sbjct: 496 APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG--LKPDMITYSLLIDGLCRGEKVDMA 553
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ Q + PD +N+I L +KV F +M + P + T +
Sbjct: 554 LNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEG 613
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + A++IW+ ILE G+ P S N+ GL + R+SD F + L+R IL
Sbjct: 614 LYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPN 673
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLER 267
T L +A ++ M ++ R
Sbjct: 674 APTWNVLVRAVVDDKPLMEYALNTESR 700
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 5/233 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A K F EM+E +P+ V Y L L R ++++ + VM NC
Sbjct: 299 GLSKAGNFNAAEKVFQEMIES-GLSPD-VRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ + L+ + W ++ G L + Y ++ LC N ++
Sbjct: 357 CNIVS-YNMLIQGLLDNKKVEQAICYWQLLHERG--LKADSTTYGLLINGLCKNGYLNKA 413
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R ++ GA D+ Y+ + L K + + H+M KN + + I
Sbjct: 414 LRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLING 473
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A + E AI + + P S N ++ GL R SD +EML
Sbjct: 474 YVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 39/250 (15%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F MV+ F NP + ++ + L I Q EA F + P L+ ++
Sbjct: 96 QALNLFQNMVDIFGCNP-GIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ I K L M G N P+++ Y ++ L + ++ + FD+M
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLN--PDILSYGTLINALAKSGNLLDAVELFDEMSV 212
Query: 130 HGAFPDSL------------------------------------TYNMIFECLIKNKKVH 153
G PD + TYN++ L K K+
Sbjct: 213 RGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLD 272
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E ++ M KNE P ++ I L A A +++ ++E+G+ P + N +L
Sbjct: 273 ESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAML 332
Query: 214 VGLRNLGRLS 223
GL G+L+
Sbjct: 333 SGLFRTGKLN 342
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 3/192 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
NP+ +L+Y T + L + + +A++ M P + ++ +D ++ D
Sbjct: 181 NPD-ILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
++W ++ ++ P++ YN ++ LC +D +++M + PD T++ +
Sbjct: 240 EIWKRLL-TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIH 298
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K + E F EMI++ P ++ L + E+WN + +N
Sbjct: 299 GLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCN 358
Query: 205 LEASANVLLVGL 216
+ S N+L+ GL
Sbjct: 359 I-VSYNMLIQGL 369
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 95/242 (39%), Gaps = 7/242 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
+ L L+ K V + + +M+ + C + +A+ K + + L+ MV
Sbjct: 46 FHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMV 105
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
I F P + +N+++ +N FF G P+ TYN++ + K ++
Sbjct: 106 DI-FGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQ 164
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + M +N P L+ T I L + A+E+++ + G+ P N+
Sbjct: 165 FEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNI 224
Query: 212 LLVGLRNLGRLSDV-----RRFAEEMLNRRILIYDVTMQKLKK-AFYNESRSMRDRFDSL 265
L+ G G R E + + Y++ + L K +ES M +R
Sbjct: 225 LIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKN 284
Query: 266 ER 267
E+
Sbjct: 285 EK 286
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
VV A + M +R +P +V+ Y + + L + ++ +A + L M + P + F
Sbjct: 134 VVPALEVLKRMKDR-GISP-NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 191
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S +D K + ++ +M+ + + PN+ Y++++ LC +N VD + D M
Sbjct: 192 SALIDAYAKRGKLSKVDSVYKMMIQMSID--PNVFTYSSLIYGLCMHNRVDEAIKMLDLM 249
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P+ +TY+ + K+ +V + +M + ++C T I A +
Sbjct: 250 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 309
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVT 243
+ A+ ++ Y+ NG++P S N++L GL G + E M R I+ Y +
Sbjct: 310 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 369
Query: 244 MQKLKKA 250
+ + KA
Sbjct: 370 IHGMCKA 376
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 73/161 (45%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN++ Y++++ LC + + + R +M P+ +T++ + + K K+ +V
Sbjct: 148 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 207
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ + MI+ P ++ I L + + AI++ + ++ G P + + L G
Sbjct: 208 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 267
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ D + ++M R + V+ L K ++ +
Sbjct: 268 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 3/208 (1%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWD-IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P++ F+ L + K+ + LW I G + P+L N +V C +
Sbjct: 7 LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSS 66
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ G PD +T + + + + + +M K + + I
Sbjct: 67 ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 126
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L A+E+ + + GI P + + L+ GL GRL+D R EM +++I
Sbjct: 127 TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 186
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLER 267
+T L A+ R + DS+ +
Sbjct: 187 NVITFSALIDAY--AKRGKLSKVDSVYK 212
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 92/240 (38%), Gaps = 3/240 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E E E +P+ + + R Q AL +L M P + S+ ++
Sbjct: 37 ENAEGIEISPD-LYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 95
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
N V + M +G ++++ ++ LC N V +M G P+
Sbjct: 96 SNSIKDAVYVAGQMEKMGIK--RDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 153
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY+ + L K+ ++ + E HEM + P + + I + ++
Sbjct: 154 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 213
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+++ I P + + L+ GL R+ + + + M+++ VT L F+ SR
Sbjct: 214 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 273
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 3/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V EA K F EM+ + E PE V+ Y + ++D AL + M
Sbjct: 564 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVM-YNALIGGYCDQGKLDTALLYRDRMVERGV 622
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L T +L + M G G L P++ YN ++ C +V
Sbjct: 623 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG--LAPDVFTYNILINGHCKEGNVKKA 680
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G +TY + L K +V E + F E ++ +P + I
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A EI + + I P + + N L+ GL LGR+ + R+ +EM R I
Sbjct: 741 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800
Query: 241 DVTMQKLKKAF 251
VT L +
Sbjct: 801 LVTYNTLISGY 811
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 2/226 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + V +AL+ M T+ ++ + L K T +L+D
Sbjct: 661 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 720
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
V G + P+L++YNA++ + ++D F +M PD +TYN + L
Sbjct: 721 EAVRRG--IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V E EM + QP + T I+ + + A+ I N ++ G P +
Sbjct: 779 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 838
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
N L+ GL G+ D +EM+ I D T L + E
Sbjct: 839 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQL 86
+ + Y T + +V AL +R M+ P + + K+ V++
Sbjct: 518 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 577
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + P +MYNA++G C+ +D + D+MV G TYN++ L
Sbjct: 578 FDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ + E EM P I + A+EI+ + G+
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ L G++ + + +E + R I
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVEN 157
PN + YN V+ C+ V +M G P+ TY + K +V E
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576
Query: 158 FFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ K E +P + I D + + A+ + ++E G+ A+ N+L+ L
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636
Query: 217 RNLGRLSDVRRFAEEM 232
GR ++ EEM
Sbjct: 637 FMDGRGTEAYELVEEM 652
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K+G + EA + M + N + Y + L + ++EAL+ M G+
Sbjct: 421 GFCKQGRLEEAAEIVNSMSAKGLSLN---TVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F++ ++ L K + + L+ M G ++ N + YN +V + +
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG--VIANTVTYNTLVHAFLMRDSIQQ 535
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ D+M+F G D++TYN + + L K V + F EM+ PT ++C I+
Sbjct: 536 AFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILIS 595
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + A++ ++ G+ P + N L+ GL +G + +
Sbjct: 596 GLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 12/251 (4%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G +V A + EMV +RFE N V+ Y + + +++EA + + M +
Sbjct: 386 GLVKKGYLVSALELLNEMVAKRFEPN---VITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
++ + L K + +QL+ M G G P++ +N+++ LC N+ ++
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCK--PDIYTFNSLINGLCKNHKMEE 500
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT--- 176
+ M G +++TYN + + + + EM+ ++ PL+ T
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML---FRGCPLDNITYNG 557
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L E + ++ +L GI P S N+L+ GL G+++D +F ++M++R
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 237 ILIYDVTMQKL 247
+ VT L
Sbjct: 618 LTPDIVTYNSL 628
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+C PT K ++ LDILV + ++ M+ G + P + + V+ LC ++VD
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVS--PTVYTFGVVMKALCMVSEVD 222
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ M HG P+S+ Y + L +N +V E +M +P I
Sbjct: 223 SACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVI 282
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L A A ++ + +L G + L+ GL +G++ + R ++ N +
Sbjct: 283 HGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTV 342
Query: 239 IYDVTMQ 245
+Y+ +
Sbjct: 343 LYNTLIS 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 4 KEGNVVEANKTFGEMVER------FEWNP-----------------------EHVLA--- 31
K+GN+ EA + FGEM + + +N E V+A
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518
Query: 32 -YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + + + +A K + M C ++ + L K + L++ M
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G G + P +I N ++ LC V++ +F M+ G PD +TYN + L K
Sbjct: 579 LGKG--IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V E N F+++ +P + T I+ A + +++G +P E + +
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696
Query: 211 VLL 213
+L+
Sbjct: 697 ILI 699
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 9/247 (3%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F +M+ R +P V + + L +VD A LR M C P +
Sbjct: 189 APNVFYDMLSR-GVSPT-VYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL 246
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ L + N + +QL + M + P++ +N V+ LC + + D+M+
Sbjct: 247 IHALCENNRVSEALQLLEDMFLMCCE--PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLR 304
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G D+LTY + L + +V E +++ P + T I+ + + E A
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFEEA 360
Query: 191 IE-IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+ ++N ++ G P + N+++ GL G L EM+ +R +T L
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILIN 420
Query: 250 AFYNESR 256
F + R
Sbjct: 421 GFCKQGR 427
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 31/240 (12%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V+ Y+T + L +V EAL+ L M C P ++ F++ + L + +
Sbjct: 238 PNSVI-YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296
Query: 86 LWDIMVGIGFN--------LM---------------------PNLIMYNAVV-GLLCNNN 115
L D M+ GF+ LM PN ++YN ++ G + +
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGR 356
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ ++ MV G PD+ T+N++ + L+K + +EM+ ++P +
Sbjct: 357 FEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYT 416
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I E A EI N + G+ N L+ L G + + + EM +
Sbjct: 417 ILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK 476
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 3/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V EA K F EM+ + E PE V+ Y + ++D AL + M
Sbjct: 190 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVM-YNALIGGYCDQGKLDTALLYRDRMVERGV 248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L T +L + M G G L P++ YN ++ C +V
Sbjct: 249 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG--LAPDVFTYNILINGHCKEGNVKKA 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G +TY + L K +V E + F E ++ +P + I
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A EI + + I P + + N L+ GL LGR+ + R+ +EM R I
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 423
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 2/210 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
V +AL+ M T+ ++ + L K T +L+D V G P+L++Y
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR--PDLVLY 360
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
NA++ + ++D F +M PD +TYN + L +V E EM +
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 420
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
QP + T I+ + + A+ I N ++ G P + N L+ GL G+ D
Sbjct: 421 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 480
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+EM+ I D T L + E
Sbjct: 481 AENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQL 86
+ + Y T + +V AL +R M+ P + + K+ V++
Sbjct: 144 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 203
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + P +MYNA++G C+ +D + D+MV G TYN++ L
Sbjct: 204 FDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ + E EM P I + A+EI+ + G+
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ L G++ + + +E + R I
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVEN 157
PN + YN V+ C+ V +M G P+ TY + K +V E
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202
Query: 158 FFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ K E +P + I D + + A+ + ++E G+ A+ N+L+ L
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262
Query: 217 RNLGRLSDVRRFAEEM 232
GR ++ EEM
Sbjct: 263 FMDGRGTEAYELVEEM 278
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMK--GENCFPTLKFFSNALDILVKLNDSTHTVQ 85
HV +Y L L + EAL+ L +M G +C P + +S +D L K DS
Sbjct: 168 HVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYS 227
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ G ++P+++ YN +V LC +D ++MV +G PD +TYN I
Sbjct: 228 TYHEMLERG--ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHG 285
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + E +M + +P + + + L A +I + +++ G+ P
Sbjct: 286 YCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPN 345
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + LL G G L ++R + M N
Sbjct: 346 VITYSTLLHGYATKGALVEMRDLLDLMQN 374
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 15/269 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNV++ G VE + P L +L K+ A+ LR M
Sbjct: 117 GFAGLGNVIKK----GYRVEPIIFTP--------LLKSLCAEKRTSNAMNIVLRRMTELG 164
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ L L + S ++L +M G + P+++ Y+ ++ L D D
Sbjct: 165 CAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDK 224
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + +M+ G PD +TYN I L K + + + + + M+KN P + + +
Sbjct: 225 AYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVH 284
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + + AI I + +G+ P + L+ L GR + R+ + M+ R +
Sbjct: 285 GYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKP 344
Query: 240 YDVTMQKLKKAFYNESR--SMRDRFDSLE 266
+T L + + MRD D ++
Sbjct: 345 NVITYSTLLHGYATKGALVEMRDLLDLMQ 373
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
++K G+VVE K +G ++P V+ Y T + + ++ +A L+ M +
Sbjct: 245 FQKAGDVVEDMKAWG-------FSPS-VITYNTIIDGYCKAGKMFKADALLKEMVAKRIH 296
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P F+ +D + + T ++++ M G L PN++ YN+++ LC+N +D
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQG--LQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+ +TYN + K K + E ++ K P + T I
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRI 237
A + A + + +L+ G+ P ++ N L+VG G + + R+ A+EM L +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 238 LIYDVTMQKLKK 249
+ Y++ + L K
Sbjct: 475 VTYNILVDALCK 486
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 6/219 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + K + EA + L + P + F+ +D K L
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M+ G + PN+ YN ++ C +V + +M +G D +TYN++ + L
Sbjct: 428 SMMLDTG--VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + EM + P+ L I A+ + + + G
Sbjct: 486 KKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV 545
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDV 242
+ NVL+ G N G+L + R EML + ++ YD+
Sbjct: 546 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 9/187 (4%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K D ++ W GF+ P++I YN ++ C + +MV P+
Sbjct: 247 KAGDVVEDMKAW------GFS--PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPN 298
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+T+N++ + +++ V + F EM + QP + + I L + + A+ + +
Sbjct: 299 EITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQD 358
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ G+ P + N L+ G L + R +++ R + +T L A Y ++
Sbjct: 359 KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDA-YGKA 417
Query: 256 RSMRDRF 262
M D F
Sbjct: 418 GRMDDAF 424
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 2/198 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ + T + + ++D+A +M P + ++ + + + +L
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G G L +L+ YN +V LC + R D+M G P LTYN + +
Sbjct: 463 KEMEGNG--LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYF 520
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ N M K + + I + + E A + N +LE G++P
Sbjct: 521 REGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 580
Query: 208 SANVLLVGLRNLGRLSDV 225
+ ++L + G + D+
Sbjct: 581 TYDILRDEMMEKGFIPDI 598
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G+ +EGNV EA K EM E N ++ Y + L + + +A++ L M
Sbjct: 448 GFCREGNVKEARKLAKEM----EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV 503
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P+ ++ +D + +ST + + +M G N++ YN ++ CN ++
Sbjct: 504 GLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR--ANIVTYNVLIKGFCNKGKLE 561
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
R ++M+ G P+ TY+++ + +++ + +++ + +
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 605
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 5/166 (3%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N++ ++ V+ LC + M G P +TYN I + K K+ + +
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM+ P + I + A +++ + G+ P + N L+ GL +
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 220 GRLSDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSMRD 260
G+L + ++M L ++ Y+ + KK E+R M D
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M P
Sbjct: 148 KEGEMRLAQSVF-DAITKWGLRPS-VVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K +L++ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNG--LVPNGVTFTTLIHGHCKNEKVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD +TYN + L K ++ +V + EMI N +P ++ T I
Sbjct: 264 YKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+E+ N +++ I + + L+ L GR D + EML+
Sbjct: 324 EGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLS 374
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L M G P++ Y+ ++ LC +D
Sbjct: 169 PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQ--PDVYTYSILINGLCKEGKLDEAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F++M+ +G P+ +T+ + KN+KV + +M+ P + T I L
Sbjct: 227 ELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
E + ++ + ++ NG+ P + S L+ G G L +M+ I + D
Sbjct: 287 CKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDD 346
Query: 242 VTMQKLKKAFYNESRS 257
V L E R+
Sbjct: 347 VAYTALISCLCREGRA 362
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EAN+ F EM++ P V + T + + ++VD A++ + M +
Sbjct: 215 GLCKEGKLDEANELFNEMLDN-GLVPNGV-TFTTLIHGHCKNEKVDLAMEIYKQMLSQGL 272
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K + L D M+ G L P+ I Y ++ C D++
Sbjct: 273 SPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG--LKPDKISYTTLIDGSCKEGDLEIA 330
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
++M+ D + Y + CL + + + E EM+ +P
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKP 379
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 3/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V EA K F EM+ + E PE V+ Y + ++D AL + M
Sbjct: 559 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVM-YNALIGGYCDQGKLDTALLYRDRMVERGV 617
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L T +L + M G G L P++ YN ++ C +V
Sbjct: 618 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG--LAPDVFTYNILINGHCKEGNVKKA 675
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G +TY + L K +V E + F E ++ +P + I
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A EI + + I P + + N L+ GL LGR+ + R+ +EM R I
Sbjct: 736 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795
Query: 241 DVTMQKLKKAF 251
VT L +
Sbjct: 796 LVTYNTLISGY 806
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 2/226 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + V +AL+ M T+ ++ + L K T +L+D
Sbjct: 656 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 715
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
V G + P+L++YNA++ + ++D F +M PD +TYN + L
Sbjct: 716 EAVRRG--IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V E EM + QP + T I+ + + A+ I N ++ G P +
Sbjct: 774 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 833
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
N L+ GL G+ D +EM+ I D T L + E
Sbjct: 834 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQL 86
+ + Y T + +V AL +R M+ P + + K+ V++
Sbjct: 513 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 572
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + P +MYNA++G C+ +D + D+MV G TYN++ L
Sbjct: 573 FDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ + E EM P I + A+EI+ + G+
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ L G++ + + +E + R I
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVEN 157
PN + YN V+ C+ V +M G P+ TY + K +V E
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571
Query: 158 FFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ K E +P + I D + + A+ + ++E G+ A+ N+L+ L
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631
Query: 217 RNLGRLSDVRRFAEEM 232
GR ++ EEM
Sbjct: 632 FMDGRGTEAYELVEEM 647
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA + F EM ++ PE +Y + + ++ + +AL+ + M P
Sbjct: 474 GRVFEALEMFDEMKQK-GIVPEQ-YSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ K +S +Q +++M G ++P+++ NAV+ L + + R F
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKG--IVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
++ G PD++TY M+ +C K K E F++MI+N P L + I L A
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A I+ + E + P + + N LL GL G++ +V EEM
Sbjct: 650 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 696
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL-------------KFFSNALDIL 74
+V +Y + L + K+ DEA + L M+ E C P + S+A D+
Sbjct: 354 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 413
Query: 75 VKL----------------------NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
K+ DS +++W+ M G+N N++ Y AV+ LC
Sbjct: 414 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN--DNVVAYTAVIDALC 471
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
V FD+M G P+ +YN + +K + + F M + +P
Sbjct: 472 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + E AI+ + + GI+P + N +L GL GRL +R E+
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 591
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F +M+E P+ VLA + + TL + + DEA + +K N PT ++
Sbjct: 618 EAVKIFYDMIEN-NCVPD-VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 675
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L + + L + M N PNLI YN ++ LC N V++ M
Sbjct: 676 LLAGLGREGKVKEVMHLLEEMYH--SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 733
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +YN + L+K ++ +E + F +M K P T + + +
Sbjct: 734 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKE 792
Query: 190 AIEIW-NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ I +Y L+ G +S + L+ G+ + FAE + + I + D + L
Sbjct: 793 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 852
Query: 249 KAFYNESRSM 258
K + +++
Sbjct: 853 KHLCKQKKAL 862
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EAL+ RVM + P+++ +S + K D TV LW +
Sbjct: 288 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD-VETV-LWLLRE 345
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ PN+ Y + +L D +R +M G PD +T+ ++ + L +
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M K++ +P + T + D + + +EIWN + +G +
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 465
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF-DSLE 266
++ L +GR+ + +EM + I+ + L F DRF D+LE
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA-----DRFGDALE 516
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN+++ L + N +D F +M G PD TYN++ + + K+ ++ E+ EM
Sbjct: 882 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 941
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ ++ T + T I+ L+ + E AI+++ ++ G P + LL GL GR+
Sbjct: 942 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 1001
Query: 223 SDVRRFAEEML 233
D EML
Sbjct: 1002 EDAENLFNEML 1012
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ +++++A+ + + PT + LD L+K L++
Sbjct: 951 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G N +YN ++ + + V F MV G PD +Y +I + L K
Sbjct: 1011 MLEYGCK--ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1068
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ +F ++++ +P + I L + E A+ ++N + + GI+P +
Sbjct: 1069 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1128
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1129 NSLILHLGKAGKAAEAGKMYEELLTK 1154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M + F P Y L L++ ++++A M C ++ L+
Sbjct: 977 MSQGFSPTP---CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 1033
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ L+ MV G N P++ Y ++ LC +++ +F Q++ G PD +
Sbjct: 1034 GNTEKVCHLFQDMVDQGIN--PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ + L K+K++ E + F+EM K P + I L A + A +++ +
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1152 LTKGWKPNVFTYNALIRG 1169
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV----DEALKFLRVMK 56
G K G + +A F EM+E A T L+ G ++ ++ + M
Sbjct: 994 GLLKAGRIEDAENLFNEMLEY------GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV 1047
Query: 57 GENCFPTLKFFSNALDILVK---LNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
+ P +K ++ +D L K LND T+ QL ++ L P+LI YN ++ L
Sbjct: 1048 DQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM------GLEPDLITYNLLIDGLG 1101
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+ ++ F++M G P+ TYN + L K K E + E++ W+P
Sbjct: 1102 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1161
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILP 204
I + + A + ++ G LP
Sbjct: 1162 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1193
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++ + + ++M G +TYN I L+K++++ + +
Sbjct: 913 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 972
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL A E A ++N +LE G N+LL G R
Sbjct: 973 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 1032
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
G V ++M +N I Y + + L KA
Sbjct: 1033 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1068
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 78/197 (39%), Gaps = 2/197 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y ++ + + V+ L LR M+ P + ++ + +L + ++
Sbjct: 320 VRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA 379
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P++I + ++ +LC+ + + F +M PD +TY + +
Sbjct: 380 KMENEGCK--PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 437
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N V ++ M + + + I L A+E+++ + + GI+P + S
Sbjct: 438 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 497
Query: 209 ANVLLVGLRNLGRLSDV 225
N L+ G R D
Sbjct: 498 YNSLISGFLKADRFGDA 514
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 4/228 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F EM E P+ Y L + + +++E LK M + T ++
Sbjct: 899 AEGLFAEMKE-LGCGPDE-FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 956
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ LVK + L+ ++ GF+ P Y ++ L +++ F++M+ +
Sbjct: 957 ISGLVKSRRLEQAIDLYYNLMSQGFS--PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 1014
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G + YN++ +V + F +M+ P + I L A +
Sbjct: 1015 GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 1074
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + +LE G+ P + N+L+ GL RL + EM + I+
Sbjct: 1075 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + K+++EA+ M+ + P L +++ + L K + ++++
Sbjct: 1090 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1149
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ G+ PN+ YNA++ + D+ + + +M+ G P+
Sbjct: 1150 ELLTKGWK--PNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 39 LIRGKQVD----EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
LIRG+ +D A + LR+M+G+ ++ ++ L K + L+D + G
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
PN + +N+++ LC + VD ++F ++MV G PD+ TY+ E L K K E
Sbjct: 318 IK--PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 375
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+F EM++ + +P+ +N I LL W ++ +G P + +
Sbjct: 376 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 435
Query: 215 GLRNLGRLSDVRRFAEEM 232
GRL++ EM
Sbjct: 436 AYCIEGRLNEAENVLMEM 453
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 10/252 (3%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
WE++ EA + EM E+ V+ + + ++ +AL+ L +MK C
Sbjct: 159 WERKAK--EAEEMLQEMFEK--GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ + + L + M G N P+ + YN ++ C + +++ F
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN--PDAVTYNLLIRGQCIDGHIESAF 272
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R M G D TYN + L K+ + + + F + +P + + I L
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI---- 237
+ + + A + ++ G P + + + L + + F EML + +
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 392
Query: 238 LIYDVTMQKLKK 249
+ Y + + KL K
Sbjct: 393 VNYTIVIHKLLK 404
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 6/225 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + +L R + AL++L +M P F++ + + N L+D M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
GF +++ Y A++ C +D F +M PD Y + + L K +
Sbjct: 74 LRGF--AQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGR 127
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
E M + W+P+ A + + + A E+ + E G+ P +
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++ GR+SD R E M R T L + F NE +
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 232
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + EA F + + + + V+++ L +L G + +A+K L M + C
Sbjct: 250 GFCKEGRLDEA-IIFLKKLPSYGCQSD-VISHNMILRSLCSGGRWMDAMKLLATMLRKGC 307
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP++ F+ ++ L + + + ++M G PN +N ++ CN +D
Sbjct: 308 FPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT--PNSRSFNPLIQGFCNRKGIDRA 365
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV G +PD +TYN++ L K+ KV + ++ P+ ++ T I
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 425
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
LL + E A+E+ + G+ P + ++ GL G++ + +F + +
Sbjct: 426 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPN 485
Query: 237 ILIYDVTMQKLKKA 250
IY+ M L KA
Sbjct: 486 AFIYNSIMMGLCKA 499
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 18/236 (7%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFP 62
NV+E G +NP LI+G K +D A++ L +M C+P
Sbjct: 332 NVLEMMPKHGHTPNSRSFNP------------LIQGFCNRKGIDRAIEHLEIMVSRGCYP 379
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L L K V + + G + P+LI YN V+ L +
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS--PSLISYNTVIDGLLKVGKAELAVE 437
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M + G PD +T + L + KVHE FFH + +P + + L
Sbjct: 438 LLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLC 497
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A + AI+ ++ NG P EAS L+ G+ G + + + E+ +R ++
Sbjct: 498 KAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 91/222 (40%), Gaps = 6/222 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ L +L ++ +A++ L C+P + + +D K + ++L++ M
Sbjct: 174 YDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMR 233
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G P+++ YN ++ C +D F ++ +G D +++NMI L +
Sbjct: 234 GKGCK--PDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ M++ P+ + I L A+ + + ++G P S N
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 351
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
L+ G N + E M++R I+ Y++ + L K
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCK 393
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
L LIR +++E +FL M + P + + + K+ + + ++ I+ G
Sbjct: 76 LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ N YN ++ C + +++ R D P++ TY+ + L K+ +
Sbjct: 136 VIDAN--SYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQA 190
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILPLEASANV 211
++++ P + C T+L+DA E A++++N + G P + NV
Sbjct: 191 MQVLDRQLQSKCYPDVVTC----TVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ G GRL + F +++
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKL 267
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 55/140 (39%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
++ PN Y+AV+ LC+ + + D+ + +PD +T ++ + K V +
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F+EM +P + I + AI + G S N++L
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L + GR D + ML +
Sbjct: 286 LCSGGRWMDAMKLLATMLRK 305
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA K F EM R + Y + L++ ++ +A + M + C
Sbjct: 244 GLGKEKRSFEAYKLFKEMALR--GLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + S +D L K V+++ M G L PN ++Y+A++ LC +D
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG--LAPNEVVYSALIHGLCKARKMDCA 359
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM PD++TYN++ + L K+ V FF EM++ +P ++
Sbjct: 360 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSG 419
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
A + A +++ + + P + L+ GL +L+ + + M R
Sbjct: 420 FCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Query: 238 -LIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
+Y + L K+ E M FD +ER
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCM--LFDEMER 508
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 4/202 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + F M R P V+ Y + L + +++D AL+ L MK C
Sbjct: 314 GLCKAGRIGAAVRIFKSMEAR-GLAPNEVV-YSALIHGLCKARKMDCALEMLAQMKKAFC 371
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K D +D M+ G P++ YN +V C + D
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK--PDVYTYNILVSGFCKAGNTDAA 429
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD M P+ +TY + L K +++ + +F M + P ++ +
Sbjct: 430 CGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDG 489
Query: 181 LLDADEPEFAIEIWNYILENGI 202
L + + E +++ + +G+
Sbjct: 490 LCKSGKLEGGCMLFDEMERSGV 511
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 2/205 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y L L + +++EA+ LR + C P + +++ +D L K S +L+
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L + + Y A++ L + + M G PD +T + + + L K
Sbjct: 260 EMALRGLVL--DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ F M P + + I L A + + A+E+ + + P +
Sbjct: 318 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEML 233
N+L+ GL G + R F +EML
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEML 402
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 66/162 (40%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + P+L +N V+ LC + V F+ +G D TY I + L KNKK+ +
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
++ N PT + L E AI++ I++NG P + L+
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
GL R + + +EM R +++ V L + +
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN A F +M +P +V+ Y T + L + +Q+ +A + + MK C
Sbjct: 419 GFCKAGNTDAACGVFDDMSSS-HCSP-NVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D L K L+D M G + N ++ LC N VD
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG---VANSQTRTRLIFHLCKANRVDEA 533
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
F+ + G P YN I LIK+ KV+
Sbjct: 534 VSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVN 565
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 6/184 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+V A F EM+E P+ V Y + + D A M +C
Sbjct: 384 GLCKSGDVEAARAFFDEMLEA-GCKPD-VYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + + L K T + M G P+ +Y+++V LC + ++
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP--PDSFVYSSLVDGLCKSGKLEGG 499
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+M G +IF L K +V E + F+ I+ E P P + I+
Sbjct: 500 CMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNA-IRKEGMPHPYAYNSIIST 557
Query: 181 LLDA 184
L+ +
Sbjct: 558 LIKS 561
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 42/249 (16%)
Query: 42 GKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
++ +EA +R M+ + P+LK + L L K + ++ G + +
Sbjct: 107 AREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTI--D 164
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ Y A+V L N + + +++ +G P TYN + L K ++ E +
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224
Query: 161 EMIKNEWQPTPLN----------------------------------CATA-ITMLLDAD 185
+++ N P + C TA I LL A
Sbjct: 225 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYD 241
+ A ++ + G +P + + ++ GL GR+ R + M R + ++Y
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 242 VTMQKLKKA 250
+ L KA
Sbjct: 345 ALIHGLCKA 353
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 35/266 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA + F +M + P+ VL Y T + L + A++FLR M+ NC
Sbjct: 133 GLCVEGKIGEALQLFDKMTGE-GFQPD-VLTYGTLINGLCKVGNTSTAIRFLRSMEQRNC 190
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
PT+ +S +D L K T + L+ M+ G +
Sbjct: 191 RPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIR 250
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+MP+ + +N +V LC V D M+ PD +TYN + +
Sbjct: 251 LFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHC 310
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
++ + N F M++ P+ ++ T I + A+ ++ + + G++P
Sbjct: 311 LRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTV 370
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEML 233
+ N L+ GL ++GRL D EM+
Sbjct: 371 TYNTLIHGLCHVGRLRDAIALFHEMV 396
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG VV+A+ M++ + P+ V+ Y + + ++ + + M + C P+
Sbjct: 276 KEGMVVKAHYVVDVMIQS-DLKPD-VVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K+ + L++ M G L+P+ + YN ++ LC+ + +
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQG--LIPDTVTYNTLIHGLCHVGRLRDAIAL 391
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV +G PD +TY ++F+ L KN ++ E + P + + +
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A E E A ++++ + G+ P + +++ GL G L++ + EM
Sbjct: 452 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 10/241 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKG----ENCFPTLKFFSNALDILVKLNDST 81
P ++ + L ++ R K L + M N + TL N+ L +L +
Sbjct: 51 PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY-TLNILINSFCHLNRLGFAF 109
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
L DI+ +G+ P+ + ++ LC + + FD+M G PD LTY
Sbjct: 110 SV--LGDIL-KLGYQ--PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 164
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L K F M + +PT + +T I L + A+ +++ +L G
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
I P + + L+ GL LG + R M++R+I+ +T L A E ++
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284
Query: 262 F 262
+
Sbjct: 285 Y 285
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV + P+ ++ Y L + ++ EA+ L+V++G N
Sbjct: 378 GLCHVGRLRDAIALFHEMVV-YGQIPD-LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D + + + L+ + G L P++ Y ++ LC +
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG--LHPDVRTYTIMINGLCQQGLLAEA 493
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
+ F +M +G P++ TYN+I ++N + F EM+ +
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 5/214 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM ++ P+ V Y T + L ++ +A+ M
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQ-GLIPDTV-TYNTLIHGLCHVGRLRDAIALFHEMVVYGQ 400
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + D L K + + L ++ G NL P++ +Y+ V+ +C +++
Sbjct: 401 IPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT--NLDPDIHIYSIVMDGMCRAGELEAA 458
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ G PD TY ++ L + + E F EM +N P
Sbjct: 459 RDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRG 518
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
L +E AI+++ +L G ++ S LLV
Sbjct: 519 FLRNNETLRAIQLFQEMLSRG-FSIDVSTTTLLV 551
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMK---GENCFPTLKFFSNALDILVKLNDSTHTV 84
+V++ T L L K+V+EAL+ L M G NC P + ++ +D L K
Sbjct: 160 NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAE 219
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+ M+ G L +++ Y+ ++ LC VD M+ G PD +TYN I +
Sbjct: 220 GVLQHMIDKGVKL--DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 277
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K + V E MI +P + T I L A + A + ++++ + P
Sbjct: 278 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP 337
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ G + G +V R EEM R
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYAR 368
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G E + EM R +P+ V+ Y L L + + EA K M +
Sbjct: 348 GYLSTGEWKEVVRRLEEMYAR-GLDPD-VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L L D+MV G + PN ++N V+ +D
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS--PNNYIFNIVLCAYAKKAMIDEA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M HG PD +TY ++ + L K +V + F++MI + P + + +
Sbjct: 464 MHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L D E A E++ + + G+ P N ++ L N G++ +R + M
Sbjct: 524 LCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ + T + L QV A + + M+ P + ++ + + QL
Sbjct: 548 NVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL 607
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D+MV +G L P+LI Y+ ++ C +DN + F +M+ G P ++TY+ I + L
Sbjct: 608 DVMVSVG--LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665
Query: 148 KNKKVHEVENFFHEMIKNEWQ 168
++ E + + MIK+ Q
Sbjct: 666 HTRRFSEAKELYLNMIKSGQQ 686
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 58/286 (20%)
Query: 16 GEMVERFEWNPEH---------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
+ V+R E +H V+ Y T + L + + VD A L+ M + P +
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN------- 119
++ +D L K + M+ G P+++ YN ++ LC VD
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVK--PDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 120 ----------------------------VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
V R ++M G PD +TY+++ + L KN K
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENGILPLEA 207
E F+ MI+ +P T +LL AI ++ + ++ NGI P
Sbjct: 390 CTEARKIFYCMIRKGIKPN----VTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445
Query: 208 SANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKK 249
N++L + + R ++ L+ ++ Y + + L K
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK 491
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA---FPDSLTYNMIFECLIKNKK 151
F MPN++ N ++ LCN V+ M G P+ +TYN I + L K +
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V E MI + + +T I L A + A + ++++ G+ P + N
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
++ GL + + M+++ ++ Y+ + L KA
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + + MV +P + + + L + +DEA+ M
Sbjct: 418 GYAARGAIADLTDLLDLMVAN-GISPNNYI-FNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L KL V ++ M+ G + PN +++N++V LC + +
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG--VTPNSVVFNSLVYGLCTVDRWEKA 533
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ + +N I L +V + M + +P ++ T I
Sbjct: 534 EELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + A ++ + ++ G+ P S + LL G GR+ + EML + +
Sbjct: 594 HCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG 653
Query: 241 DVTMQKLKKAFYNESR 256
VT + + ++ R
Sbjct: 654 AVTYSTILQGLFHTRR 669
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K F M+ R P +V Y L + + L +M P
Sbjct: 386 KNGKCTEARKIFYCMI-RKGIKP-NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ L K + ++ M G L P+++ Y ++ LC VD+
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG--LSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+QM+ G P+S+ +N + L + + E F EM +P + T + L +
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A + + + G+ P S N L+ G GR + + + M++
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGEN 59
G+ K G + A F EM+ R P V Y T L L ++ EA + +L ++K
Sbjct: 628 GYCKTGRIDNAYCLFREML-RKGVTPGAV-TYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + ++ L+ L K N +++ + +L PN+I + ++ +L +
Sbjct: 686 QW-DIYTYNIILNGLCKTNCVDEAFKIFQSLCS--KDLRPNIITFTIMIDVLFKGGRKKD 742
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + HG P+ +TY ++ + +I+ + E +N F M K+ P + I
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIR 802
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
LL E A + I E LEAS LL+ L
Sbjct: 803 SLLGRGEIMRAGAYLSKIDEMN-FSLEASTTSLLISL 838
>gi|302818393|ref|XP_002990870.1| hypothetical protein SELMODRAFT_132504 [Selaginella moellendorffii]
gi|300141431|gb|EFJ08143.1| hypothetical protein SELMODRAFT_132504 [Selaginella moellendorffii]
Length = 554
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F +M+ER + P HV+ Y T + L + +Q D+A +L M+
Sbjct: 19 GLCKAGRIAEACELFQQMIER-RYTP-HVVLYTTVIDGLCKARQFDKACSYLEKMES--- 73
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L + + +L + G N P++++Y + LC VDN
Sbjct: 74 -PDIVTYSAFIDGLCNVGKVDYAFELLKQIQERG-NARPDVVLYTIFIKGLCKAGQVDNA 131
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F +M G P+++TYN + L +K V F EMI+ +P
Sbjct: 132 VELFYKMEDIGCPPNAVTYNSLMRALAWHKSVDAARRLFTEMIRKGCEP 180
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
+E + F E V + + + AY + + L R ++++EA + L+ + ++ PT+ ++
Sbjct: 198 LEDARKFEEDVRNECGSLKGLAAYVSQINKLCRERKLEEAYRILQTI-AKDMQPTVGMYA 256
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ ++ + +L MV G ++ N +++ +V +L + + +Q +
Sbjct: 257 TLVRAFLRDERAMEVDELVKDMVRRGCSI--NHHLWDTLVRMLFTSGKLKISLTVAEQAL 314
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT-----PLNCATAITMLLD 183
G + LTY I L++ KV + F +M+++ +PT + ++ +T L
Sbjct: 315 ERGCEINILTYYEIIRGLVRLGKVSKALAQFQKMVEH-GKPTLSRQMAMVHSSLVTKLCR 373
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E A E+ ++E G+ P S +L+ G+ R+ E+M
Sbjct: 374 RGRLEDAYELHQKMVERGLSPTIKSYKLLIKYHFKAGKAGISRQLFEQM 422
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 18/282 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG VVEA MVE P + Y T + + + AL LR M+ +
Sbjct: 90 GLCREGRVVEAVALLDRMVED-GLQPNQI-TYGTIVDGMCKMGDTVSALNLLRKMEELSH 147
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K T L+ M G + P+++ Y+ ++ C++
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG--IFPDIVTYSCMINGFCSSGKWSE 205
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M+ PD +T++ + L+K ++ ++ EMI + P + C T +
Sbjct: 206 AQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLD 265
Query: 180 MLLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRF 228
L D+ + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 266 GLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEEL 325
Query: 229 AEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ VT + +SR FDS+ +
Sbjct: 326 YEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 7/232 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G E V EA F +M + +V+ + T + L R +V EA+ L M +
Sbjct: 59 GLCVEDRVSEALDLFHQMCK------PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 112
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D + K+ D+ + L M + ++ P++++Y+A++ L + +
Sbjct: 113 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-HIKPDVVIYSAIIDGLWKDGRHTDA 171
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G FPD +TY+ + + K E + EM+ + P + + I
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L+ + A ++ ++ +G+ P + N LL GL + G+L D + M
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 112/263 (42%), Gaps = 11/263 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G EA + EM+ R + +P+ V+ + + L++ ++ A L+ M
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVR-KISPD-VVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQ-----LWDIMVGIGFN-LMPNLIMYNAVVGLL 111
P + + LD L KL D+ + + DI FN + P++ YN ++ L
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
N +++M G PD++TY+ + L K ++ E F M + P
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ T IT A + +E++ + GI+ + L+ G R +G ++ +E
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433
Query: 232 MLNRRILIYDVTMQKLKKAFYNE 254
M++ + +T++ + +++
Sbjct: 434 MISSGVYPDTITIRNMLTGLWSK 456
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ ++ L K + Q++D
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ +N ++ C VD+ F +M G +++TY + K
Sbjct: 363 SMGSKSFS--PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAM 465
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + ++ +N ++ C+ + + F ++ G P +T+N + L +V
Sbjct: 8 GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + FH+M K P + T + L A+ + + ++E+G+ P + + ++
Sbjct: 68 EALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123
Query: 214 VGLRNLG 220
G+ +G
Sbjct: 124 DGMCKMG 130
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 124 GLCVEGKIGEALHLFDKMIDEGFQPN---VVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 180
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +++ +D L K T L+ MVG G + P++ Y ++V LCN + +
Sbjct: 181 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS--PDIFTYTSLVHALCNLCEWKH 238
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V +QMV PD + ++ + + L K KV E MI+ +P + T +
Sbjct: 239 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 298
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLL-VGLRNLGRL 222
E + A+++++ ++ G P S L+ G ++ G L
Sbjct: 299 GHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGL 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 34 TFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
T TLIRG ++ EAL M E P + + ++ L K+ +++ ++L
Sbjct: 116 TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 175
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M N P++++Y +++ LC + V F F QMV G PD TY + L
Sbjct: 176 MEQ--GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 233
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ V ++M+ ++ P + +T + L + A EI + +++ G+ P +
Sbjct: 234 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 293
Query: 210 NVLLVG 215
L+ G
Sbjct: 294 TTLMDG 299
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K+ ++ H L+D M+ GF PN++ Y ++ LC + R M PD
Sbjct: 130 KIGEALH---LFDKMIDEGFQ--PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 184
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+ Y I + L K+++V E N F +M+ P + + L + E + + N
Sbjct: 185 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 244
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ + ILP + ++ L G++++ + M+ R +
Sbjct: 245 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 286
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ L + K+ + + L M F + PN+ N ++ C+ N V F
Sbjct: 43 PSIVDFAKLLTSIAKMKHYSTVLSLSTQM--DSFGVPPNVYTLNILINSFCHLNRVGFAF 100
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+++ G PD T+ + L K+ E + F +MI +QP + T I L
Sbjct: 101 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 160
Query: 182 LDADEPEFAIEIWNYILENGILP 204
AI + + + P
Sbjct: 161 CKVGNTSAAIRLLRSMEQGNCQP 183
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 2/231 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P ++ + L ++ + K L M P + + ++ LN
Sbjct: 42 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 101
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G P+ + ++ LC + FD+M+ G P+ +TY +
Sbjct: 102 VLAKILKLGHQ--PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 159
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K M + QP + + I L + A +++ ++ GI P
Sbjct: 160 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 219
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L+ L NL V +M+N +IL V + A E +
Sbjct: 220 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 270
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G+V A K F M + + Y L L+ + A+ +R M+ P
Sbjct: 360 RTGDVTGAAKLFSFM--QLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPG 417
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D LV+ ++ + M G L+PN +++ V+ C +VD R
Sbjct: 418 VMTYGAVVDGLVRCGRLEDACKVIEEMRSKG--LVPNEFVFSPVITGFCKLGEVDRASRV 475
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+D MV G P+ + Y+ + + L + K+ E E F EMI+ + P + ++ +
Sbjct: 476 WDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQ 535
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+ W +L G P + +VL+ GL N+GR D + ML R + +
Sbjct: 536 IGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIA 595
Query: 244 MQKLKKAF 251
+ K F
Sbjct: 596 YTSMIKGF 603
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 10 EANKTFGEM--VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
A G M +ER E P V+ Y + L+R ++++A K + M+ + P F
Sbjct: 398 RAKAAMGVMRRMERAEVVPG-VMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVF 456
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S + KL + ++WD MV G PN+++Y+A++ L + F +M
Sbjct: 457 SPVITGFCKLGEVDRASRVWDTMVAAGIK--PNVVLYSAMIDGLARCGKMTEAELLFREM 514
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ P+ +TY+ + + + +F+ +M++ P + + I L +
Sbjct: 515 IEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRS 574
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-----ILIYDV 242
+ A+ +W ++L G +P + ++ G G + R +ML R ++ Y+V
Sbjct: 575 KDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNV 634
Query: 243 TMQKLKKA 250
+ L +A
Sbjct: 635 LLDGLLRA 642
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA F EM+E + P +++ Y + + + +AL F M C
Sbjct: 497 GLARCGKMTEAELLFREMIEA-KCVP-NIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGC 554
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S ++ L + S + +W M+G G +P+ I Y +++ C + VD
Sbjct: 555 TPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRG--CVPDTIAYTSMIKGFCVSGMVDAG 612
Query: 121 FRFFDQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
R F M+ G PD + YN++ + L++ K + + ++M+ P + C T
Sbjct: 613 LRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNT 669
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/222 (18%), Positives = 86/222 (38%), Gaps = 3/222 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L +VD+A+ + M + + F+ L +++ D T +L+ M
Sbjct: 317 YSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQ 375
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G P+ YN ++ L +M P +TY + + L++ +
Sbjct: 376 LKG--CAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGR 433
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + EM P + IT E + A +W+ ++ GI P +
Sbjct: 434 LEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSA 493
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
++ GL G++++ EM+ + + +T + + ++
Sbjct: 494 MIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQ 535
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 8/206 (3%)
Query: 39 LIRGKQVD----EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
LIRG+ +D A + LR+M+G ++ +D L K L+D G+
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD---GLE 432
Query: 95 F-NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
+ + PN + +N V+ LC D F ++MV G PD+ TY+ E L K K
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E +F EM++ + +P+ +N I L A IW ++ G P + +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILI 239
N GRL + EM I++
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIV 578
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 91/236 (38%), Gaps = 4/236 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
W +E EA K EM + P V + R ++ A++ MK + C
Sbjct: 275 WCREQKAEEAEKMLNEMFDN-GLVPCAVTC-TAVVNAYCREGRMSGAVRVFESMKLKGCE 332
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ + + + L D M G P+++ YN ++ C + +++ F
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVE--PDVVTYNLLIRGQCIDGHIESAF 390
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R M +G D TYN++ + L K KV E + F + +P + T I L
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A ++ G P + + + L + F +EML + +
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 33/202 (16%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT ++ + L + D H + +MV G+ P+ +N+++ C +D
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWR--PDAFTFNSLILGYCRTQQLDVAQ 184
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE--------------- 166
FD+M G D+++Y + E + +V E F E+ + +
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDAR 244
Query: 167 ----------------WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
W+P A + + + E A ++ N + +NG++P +
Sbjct: 245 RGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCT 304
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
++ GR+S R E M
Sbjct: 305 AVVNAYCREGRMSGAVRVFESM 326
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G + TF E + P+ Y F+ L + K E L F+ M ++ P+
Sbjct: 452 KGGKFDVACTFLEKMVSAGCAPD-TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ +D L K + ++W MV +G + P+++ Y V CN +
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCS--PDVVTYTTSVRAYCNEGRLHEAENVV 568
Query: 125 DQMVFHGAFPDSLTYNMIFE 144
+M G D++ YN + +
Sbjct: 569 MEMKKGGIIVDAMAYNTLID 588
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA + F EM ++ PE +Y + + ++ + +AL+ + M P
Sbjct: 384 GRVFEALEMFDEMKQK-GIVPEQ-YSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 441
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ K +S +Q +++M G ++P+++ NAV+ L + + R F
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKG--IVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
++ G PD++TY M+ +C K K E F++MI+N P L + I L A
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A I+ + E + P + + N LL GL G++ +V EEM
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 606
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL-------------KFFSNALDIL 74
+V +Y + L + K+ DEA + L M+ E C P + S+A D+
Sbjct: 264 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 323
Query: 75 VKL----------------------NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
K+ DS +++W+ M G+N N++ Y AV+ LC
Sbjct: 324 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN--DNVVAYTAVIDALC 381
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
V FD+M G P+ +YN + +K + + F M + +P
Sbjct: 382 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 441
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + E AI+ + + GI+P + N +L GL GRL +R E+
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 501
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F +M+E P+ VLA + + TL + + DEA + +K N PT ++
Sbjct: 528 EAVKIFYDMIEN-NCVPD-VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 585
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L + + L + M N PNLI YN ++ LC N V++ M
Sbjct: 586 LLAGLGREGKVKEVMHLLEEMYH--SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 643
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +YN + L+K ++ +E + F +M K P T + + +
Sbjct: 644 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKE 702
Query: 190 AIEIW-NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ I +Y L+ G +S + L+ G+ + FAE + + I + D + L
Sbjct: 703 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 762
Query: 249 KAFYNESRSM 258
K + +++
Sbjct: 763 KHLCKQKKAL 772
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EAL+ RVM + P+++ +S + K D TV LW +
Sbjct: 198 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD-VETV-LWLLRE 255
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ PN+ Y + +L D +R +M G PD +T+ ++ + L +
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M K++ +P + T + D + + +EIWN + +G +
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 375
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF-DSLE 266
++ L +GR+ + +EM + I+ + L F DRF D+LE
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA-----DRFGDALE 426
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN+++ L + N +D F +M G PD TYN++ + + K+ ++ E+ EM
Sbjct: 792 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 851
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ ++ T + T I+ L+ + E AI+++ ++ G P + LL GL GR+
Sbjct: 852 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 911
Query: 223 SDVRRFAEEML 233
D EML
Sbjct: 912 EDAENLFNEML 922
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++ + + ++M G +TYN I L+K++++ + +
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 882
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL A E A ++N +LE G N+LL G R
Sbjct: 883 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 942
Query: 219 LGRLSDVRRFAEEMLNRRI 237
G V ++M+++ I
Sbjct: 943 AGNTEKVCHLFQDMVDQGI 961
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y ++ + + V+ L LR M+ P + ++ + +L + ++
Sbjct: 230 VRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA 289
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P++I + ++ +LC+ + + F +M PD +TY + +
Sbjct: 290 KMENEGCK--PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 347
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N V ++ M + + + I L A+E+++ + + GI+P + S
Sbjct: 348 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ G R D + M
Sbjct: 408 YNSLISGFLKADRFGDALELFKHM 431
>gi|302141771|emb|CBI18974.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+VDEA+ ++ M C PT +S + I ++ D+ +T D+ + +
Sbjct: 78 RVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYT--FLDMERN---EIEAD 132
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ +YNA++G C N + N +R ++M G P+S T N+I LI E F
Sbjct: 133 VAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFR 192
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
MIK P I M + D+ E A+++W Y+ +P + +VL+ GL G
Sbjct: 193 RMIK-VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKG 251
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
S EEM+ + I VT KLK+ E R
Sbjct: 252 NASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGR 287
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 8/274 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
GW A F EMV+R HV Y + L RG + A + L M K
Sbjct: 233 GWAVVKKPENARSLFDEMVKRGVELDVHV--YNALIDALCRGGDITSAQEQLSNMQKSHG 290
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + L D +++ D M L PN+ YNAV+ LLC+ +++
Sbjct: 291 LVPNAATYGPFLHAACASKDVRAALRVLDRM--HTHALTPNVFTYNAVIRLLCDLGEINE 348
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ D++ G PD +YN + K K+V++ M K P + +
Sbjct: 349 AYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLK 408
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN-LGRLSDVRRFAEEMLNRRIL 238
ML+ + AIE+W+ + + G P A+ V++ GL + GR D + M++ I
Sbjct: 409 MLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIP 468
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTS 272
Y T + L+ +RD+ L R + S
Sbjct: 469 PYQATCEVLRDRLL--MLGLRDQLGVLTDRMRRS 500
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + L R ++DEA + L +K C P + +S +D L K L++
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M G G + +++ Y+ ++ LC VD +MV G P ++TYN + + L
Sbjct: 348 VMTGDGCD--ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 405
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE-FAIEIWNYILENGILPLEA 207
+ E EM ++ P+ + I + + + A++ + +++NG++P
Sbjct: 406 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465
Query: 208 SANVLLVGLRNLGRLSDVRRF 228
+ ++LL GL+ L ++R
Sbjct: 466 TYSILLEGLKKSKDLHELRHL 486
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + A + F +M +R N V+ Y + L + +V +A++ L MK C
Sbjct: 88 GLCRAGKIETALEFFRKMDDRCSPN---VITYSVLIDGLCKANRVSQAVELLESMKARGC 144
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ +D L K + W+++ + +PNL+ YN+++ LC V +
Sbjct: 145 SPDVITYTILVDGLCK---ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD 201
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
M G P+ +TY + + L K +V + +MI P + I
Sbjct: 202 ALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 261
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR---- 235
L AD+ + +I + + GI P + + ++ GL RL + R + +R
Sbjct: 262 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 321
Query: 236 RILIYDVTMQKLKKA 250
+++Y + L KA
Sbjct: 322 DVILYSTLIDGLCKA 336
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A +M+++ P+ ++ Y + L + QVDE++ LR
Sbjct: 227 GLCKVGRVKDACAMLADMIDK-GGTPD-LMIYNMLINGLCKADQVDESIALLRRAVSGGI 284
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + L + N +L + G P++I+Y+ ++ LC VD
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP--PDVILYSTLIDGLCKAGKVDEA 342
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M G D +TY+ + + L K +V E M++ P+ + + I
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 402
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL-SDVRRFAEEMLNRRI-- 237
L D + + AIE+ + + P + N+L+ G+ + R+ S + +EM++ +
Sbjct: 403 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIP 462
Query: 238 --LIYDVTMQKLKKA 250
+ Y + ++ LKK+
Sbjct: 463 DHITYSILLEGLKKS 477
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + + D A + MK C P++ ++ LD L + + L+
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 88 DIMVG------IGFNLM-------------------------PNLIMYNAVVGLLCNNND 116
M+ I FN++ PN+I Y+ ++ LC N
Sbjct: 69 QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANR 128
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V + M G PD +TY ++ + L K KV EM+ P + +
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 188
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR- 235
+ L A A+ + + G P + L+ GL +GR+ D +M+++
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248
Query: 236 ---RILIYDVTMQKLKKA 250
++IY++ + L KA
Sbjct: 249 GTPDLMIYNMLINGLCKA 266
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V +A + M R +P+ V+ Y + L + +V A + LR M C
Sbjct: 122 GLCKANRVSQAVELLESMKAR-GCSPD-VITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +++ L L + + + L M G PN++ Y ++ LC V +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCT--PNVVTYGTLIDGLCKVGRVKDA 237
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G PD + YNM+ L K +V E + +P + ++ I
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L ++ + A + Y+ G P + L+ GL G++ + E M +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357
Query: 237 ILIYDVTMQKLKKA 250
++ Y + L KA
Sbjct: 358 VVTYSTLIDGLCKA 371
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ YN+++ LC NN+ D F+ M P +TYN + + L + K+
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EM+ ++ +T L A + E A+E + +++ P + +VL+ GL
Sbjct: 68 FQEMLDRRSHDV-ISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSVLIDGLCK 125
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+S E M R +T L ES+
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
HG P+ +TYN + + L KN + + F M E P+ + T + L + E
Sbjct: 4 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 63
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR---RILIYDVTMQK 246
A+ ++ +L+ + S N+L+ GL G++ F +M +R ++ Y V +
Sbjct: 64 AMALFQEMLDRRSHDV-ISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDG 122
Query: 247 LKKA 250
L KA
Sbjct: 123 LCKA 126
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+V A + + M+E E P+ V + + + ++A M +N
Sbjct: 541 GLSKLGDVSRALQVYNRMLE-LELVPDKV-TFNILIAGACKAGNFEQASALFEEMVAKNL 598
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F +D L K + D+M +G + PN++ YNA+V LC + ++
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG--VPPNVVTYNALVHGLCKSGRIEEA 656
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F ++MV G PDS+TY + L + + + E+ W P + +
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L + + E AI + ++ G P + N L+ L G L + RR +M +R
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 32/260 (12%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + +VDEAL+ L M C P + F++ +D L K + S Q++D
Sbjct: 430 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFD 489
Query: 89 IMVGIGFNLMPNLIMY-------------------------------NAVVGLLCNNNDV 117
M + L+P+ I Y N + L DV
Sbjct: 490 DM-ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDV 548
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ +++M+ PD +T+N++ K + F EM+ QP +
Sbjct: 549 SRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I L A + E A +I + + G+ P + N L+ GL GR+ + +F EEM++
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 668
Query: 238 LIYDVTMQKLKKAFYNESRS 257
+ +T L A SR+
Sbjct: 669 VPDSITYGSLVYALCRASRT 688
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN- 59
G K G + EA + EM+ + +++ Y +FL L + + EA + +R ++ +
Sbjct: 789 GLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSL 848
Query: 60 -CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P FS +D L K + ++D M+ G+ +PN++ YN ++ LC + ++
Sbjct: 849 RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGY--VPNVVTYNVLMNGLCKTDKME 906
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ MV G PD +TY+++ + K V E H M P + + I
Sbjct: 907 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966
Query: 179 TMLLDADEPEFAIEIW-NYILENGILPLEASANVLLVGLRNLG 220
L +D+ A +++ + L++G+ P + + L+ GL G
Sbjct: 967 DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA F +M+ + P +V+ Y + L + +++ A + M +
Sbjct: 369 GLCKCGQIDEACSVFDDMIAG-GYVP-NVITYNALVNGLCKADKMERAHAMIESMVDKGV 426
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D K + ++L M G PN++ +N+++ LC ++
Sbjct: 427 TPDVITYSVLVDAFCKASRVDEALELLHGMASRG--CTPNVVTFNSIIDGLCKSDRSGEA 484
Query: 121 FRFFDQMVF-HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP----LNCA 175
F+ FD M HG PD +TY + + L + + + E M P P NC
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM------PDPDTYAFNC- 537
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L + A++++N +LE ++P + + N+L+ G G EEM+ +
Sbjct: 538 -CINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596
Query: 236 RI 237
+
Sbjct: 597 NL 598
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 111/257 (43%), Gaps = 5/257 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC--F 61
K G++ EA + G+M R P +V+ Y + L + ++DEA + ++ M ++C
Sbjct: 263 KAGDLEEARRLHGDMSSR-SCVP-NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +++ LD L K + + +L + + P+ + ++ ++ LC +D
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD M+ G P+ +TYN + L K K+ M+ P + + +
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A + A+E+ + + G P + N ++ GL R + + ++M + L+ D
Sbjct: 441 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500
Query: 242 -VTMQKLKKAFYNESRS 257
+T L + R+
Sbjct: 501 KITYCTLIDGLFRTGRA 517
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 4 KEGNVVEANKTFGEMVERF-EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC-- 60
K G++ EA + G+M R +V+ Y + L + ++DEA + ++ M ++C
Sbjct: 754 KAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDV 813
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ LD L K + +L + + P+ + ++ ++ LC D
Sbjct: 814 LPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 873
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD M+ G P+ +TYN++ L K K+ M+ P + + +
Sbjct: 874 CNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDA 933
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + A+E+ + + G P + N ++ GL
Sbjct: 934 FCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 6/246 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F E+VER +P+ V+ Y T + +L + ++EA + M +C P + +S ++ L
Sbjct: 239 FEELVERGH-HPD-VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGL 296
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF- 133
K+ +L M +++PN+I YN+ + LC + + G+
Sbjct: 297 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLR 355
Query: 134 --PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD++T++ + + L K ++ E + F +MI + P + + L AD+ E A
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ +++ G+ P + +VL+ R+ + M +R VT +
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Query: 252 YNESRS 257
RS
Sbjct: 476 CKSDRS 481
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G EA F +M+ + P +V+ Y + L + +++ A + M +
Sbjct: 863 GLCKCGQTDEACNVFDDMIAG-GYVP-NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGV 920
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D K + ++L M G PN++ +N+++ LC ++
Sbjct: 921 TPDVITYSVLVDAFCKASHVDEALELLHGMASRG--CTPNVVTFNSIIDGLCKSDQSGEA 978
Query: 121 FRFFDQMVF-HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP----LNCA 175
F+ FD M HG PD +TY + + L + + E M P P NC
Sbjct: 979 FQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM------PDPDTYAFNCC 1032
Query: 176 -TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ L D + +LE ++P + + N+L+ G G EEM+
Sbjct: 1033 INGLSKLGDVSRA------LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 1086
Query: 235 RRI 237
+ +
Sbjct: 1087 KNL 1089
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-- 58
G K G +A EMV + +P+ V+ Y T + +L + ++EA + M
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGH-HPD-VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773
Query: 59 -NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P + +S ++ L K+ +L M+ +++PN+I YN+ + LC + +
Sbjct: 774 RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833
Query: 118 DNVFRFFDQMVFHGAF---PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ G+ PD++T++ + + L K + E N F +MI + P +
Sbjct: 834 AEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ L D+ E A + +++ G+ P + +VL+
Sbjct: 893 NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLV 931
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 104 YNAVVGLLCNNNDVDNVFRFF-DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN V+ LC + F +M G P +TYN I L K+ ++ F E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ P + T I L A + E A + + +P + +VL+ GL +GR+
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 223 SDVRRFAEEMLNR------RILIYDVTMQKL-KKAFYNES----RSMRD 260
+ R +EM + I+ Y+ + L K++ E+ RS+RD
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ +A ++E+ P + Y + + +D A L MK ++
Sbjct: 187 GLCKKGHTQKAFDLL-RLMEQGSTKPNTCI-YSIVIDAFCKDGMLDGATSLLNEMKQKSI 244
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L KL+ + L+ M I N+ PN+ +N+V+ LC V++
Sbjct: 245 PPDIFTYSTLIDALCKLSQWENVRTLFLEM--IHLNIYPNVCTFNSVIDGLCKEGKVEDA 302
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G PD +TYNMI + +V F MI +P ++ I
Sbjct: 303 EEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILING 362
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A+++ I + G+ P + NVLL GL LGR + F +EML+
Sbjct: 363 YARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query: 38 TLIRG----KQVDEALKFLRVMKGEN-CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
TL+RG +V +A+ + + EN C P + ++ L K HT + +D++
Sbjct: 147 TLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCK---KGHTQKAFDLLRL 203
Query: 93 I-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + PN +Y+ V+ C + +D ++M PD TY+ + + L K +
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V F EMI P + I L + E A EI Y++E G+ P + N+
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ G G++ R + M+N+ I
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSI 349
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G + A EM ++ P + Y T + L + Q + M N +P
Sbjct: 225 KDGMLDGATSLLNEMKQK--SIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPN 282
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ +D L K ++ M+ G + P++I YN ++ VD
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD--PDVITYNMIIDGYGLRGQVDRAREI 340
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD M+ P+ ++YN++ + KK+ E E+ + +P+ + C + L +
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILI 239
+ A ++ +L G +P + LL G G + + ++ RR I I
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460
Query: 240 YDVTMQKLKK 249
Y + L K
Sbjct: 461 YTAVIDGLCK 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 104/247 (42%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V A + F M+ + P ++++Y + R K++DEA++ R + +
Sbjct: 327 GYGLRGQVDRAREIFDSMINK-SIEP-NIISYNILINGYARQKKIDEAMQVCREISQKGL 384
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ + L L +L + +D M+ G +P+L + ++G N V+
Sbjct: 385 KPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH--IPDLYTHCTLLGGYFKNGLVEEA 442
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ + Y + + L KN K+ + F ++ P + I+
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A ++ + +NG L + NV++ G ++S+++ F EE+ +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFE 562
Query: 241 DVTMQKL 247
T++ L
Sbjct: 563 AATVELL 569
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 113/293 (38%), Gaps = 40/293 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA K F EM R + Y + L++ ++ +A + M C
Sbjct: 65 GLGKEKRSFEAYKLFKEMALR--GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + S +D L K V+++ M G L PN ++Y+A++ LC +D
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG--LAPNEVVYSALIHGLCKARKMDCA 180
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP----------- 169
QM PD++TYN++ + L K+ V FF EM++ +P
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 170 -----------------TPLNCAT----AITMLLD----ADEPEFAIEIWNYILENGILP 204
T +N T T ++D + E A+ + I NG P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
A+ N LL GL +GRL + ++++ VT L E RS
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 353
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA K F EM R + Y + L++ ++ +A + M C
Sbjct: 346 GLGKEKRSFEAYKLFKEMALR--GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 403
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + S +D L K V+++ M G L PN ++Y+A++ LC +D
Sbjct: 404 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG--LAPNEVVYSALIHGLCKARKMDCA 461
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
QM PD++TYN++ + L K+ V FF EM++ +P
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 5/248 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + F M R P V+ Y + L + +++D AL+ L MK C
Sbjct: 135 GLSKAGRIGAAVRIFKSMEAR-GLAPNEVV-YSALIHGLCKARKMDCALEMLAQMKKAFC 192
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K D +D M+ G P++ YN ++ C + D
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK--PDVYTYNILISGFCKAGNTDAA 250
Query: 121 FRFFDQ-MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
Q +G D TY I + L KNKK+ E ++ N PT +
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L E AI++ I++NG P + L+ GL R + + +EM R + +
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370
Query: 240 YDVTMQKL 247
V L
Sbjct: 371 DTVCYTAL 378
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y L L + +++EA+ LR + C P + +++ +D L K S +L+
Sbjct: 21 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 80
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L + + Y A++ L + + M HG PD +T + + + L K
Sbjct: 81 EMALRGLAL--DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ F M P + + I L A + + A+E+ + + P +
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKAFYNESRS 257
NVL+ GL G + R F +EML + Y++ + KA ++ S
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+++EA+ + + C PT+ ++ L+ L K+ + L +V G P+++
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT--PDVVT 58
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y +++ L ++ F +M G D++ Y + L++ K+ + + + M
Sbjct: 59 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ P + +T I L A A+ I+ + G+ P E + L+ GL
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P + YNA++ LC ++ ++V +G PD +TY + + L K K+ E
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 159 FHEMIKNEWQPTPLNCATA-ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM + C TA I LL + A ++ + +G +P + + ++ GL
Sbjct: 79 FKEMALRGLALDTV-CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137
Query: 218 NLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
GR+ R + M R + ++Y + L KA
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN +A EM+ R +P V+ Y + + ++ + ++ A +FL M+
Sbjct: 319 GYCKEGNFHQALVMHAEML-RHGLSPS-VITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + ++ +D + ++ M+ GF+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L P+++ Y+ V+ C + DVD R +MV G PD++TY+ + +
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ ++ E + F EM++ P I + + AI++ N ++E G+LP
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ +VL+ GL R + +R ++ + DVT L
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 25/269 (9%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +V+A +M E+ P+ V++Y T L R VDEAL+ R M + P
Sbjct: 429 GKMVDAIAVLEDMKEK-GLTPD-VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S+ + + + L+D M+ +G L P+ Y A++ C D+ + +
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVG--LPPDEFTYTALINAYCMEGDLQKAIQLHN 544
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G PD +TY+++ L K + E + ++ E P+ + T T++ +
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDV---TYHTLIENCS 601
Query: 186 EPEF------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
EF A +++ +LE P + NV++ G G +
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYS 661
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+EM+ L++ VT+ L K + E +
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKTLHKEGK 690
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 4/228 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+ A F EM++ + +P +V Y + +D AL+F M+ + C P +
Sbjct: 185 NISFAENVFKEMLQS-QVSP-NVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ +D KL +L M G L PNLI YN V+ LC + + +
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKG--LEPNLISYNVVINGLCREGRMKEISFVLTE 300
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G D +TYN + + K H+ EM+++ P+ + + I + A
Sbjct: 301 MNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGN 360
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A E + + G+ P E + L+ G G +++ R +EM++
Sbjct: 361 MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 2/174 (1%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P++I Y +++ +C +++ F DQM G P+ TY + + + ++E
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
EMI N + P+ + I A + AI + + E G+ P S + +L G
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR--DRFDSLER 267
+ + R +M+ + I +T L + F + R+ D FD + R
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 40/213 (18%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG--IGFNLMPNLI 102
+D+AL + + + P + ++ LD ++ S + + + + + PN+
Sbjct: 150 IDKALSIVHLSQAHGFMPGVLSYNAVLDATIR---SKRNISFAENVFKEMLQSQVSPNVF 206
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN ++ C ++D RFFD+M G P+ +TYN + + K +K+ +
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDD-------- 258
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
E+ + G+ P S NV++ GL GR+
Sbjct: 259 ---------------------------GFELLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
++ EM R + +VT L K + E
Sbjct: 292 KEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEG 324
>gi|302785101|ref|XP_002974322.1| hypothetical protein SELMODRAFT_30949 [Selaginella moellendorffii]
gi|300157920|gb|EFJ24544.1| hypothetical protein SELMODRAFT_30949 [Selaginella moellendorffii]
Length = 522
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F +M+ER + P HV+ Y T + L + +Q D+A +L M+
Sbjct: 81 GLCKAGRIAEACELFQQMIER-RYTP-HVVLYTTVIDGLCKARQFDKACSYLEKMES--- 135
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L + + +L + G N P++++Y + LC VDN
Sbjct: 136 -PDIVTYSAFIDGLCNVGKVDYAFELLKQIQERG-NARPDVVLYTIFIKGLCKAGQVDNA 193
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F +M G P+++TYN + L +K V F EMI+ +P
Sbjct: 194 VELFYKMEDIGCPPNAVTYNSLMRALAWHKSVDAARRLFTEMIRKGCEP 242
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Query: 35 FLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
FL+T L + ++ EA + ++ F ++ +++ +D LVK ++++ +
Sbjct: 6 FLVTGLCKAGKISEATDHYQRLRKSLRFLSVVVYNSLIDGLVKAKLVDKALEIFSRDMDE 65
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
PN Y A+V LC + F QM+ P + Y + + L K ++
Sbjct: 66 AL-CQPNSHTYGALVSGLCKAGRIAEACELFQQMIERRYTPHVVLYTTVIDGLCKARQFD 124
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ ++ +M P + + I L + + ++A E+ I E G
Sbjct: 125 KACSYLEKM----ESPDIVTYSAFIDGLCNVGKVDYAFELLKQIQERG 168
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 39 LIRGKQVD----EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
LIRG+ +D A + LR+M+G ++ +D L K L+D G+
Sbjct: 376 LIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD---GLE 432
Query: 95 F-NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
+ + PN + +N V+ LC D F + M+ G PD+ TY+ E L K K
Sbjct: 433 YRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ 492
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E F EM++ + +P+ +N I L + A IW ++ G P + +
Sbjct: 493 EGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSV 552
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILI 239
N GRL + EM R ++
Sbjct: 553 RAYCNEGRLDEAENVVTEMKKCRTIV 578
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 6/254 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLI-TLIRGKQVDEALKFLRVMKGENC 60
W +E EA K EM F+ + T ++ R ++ A++ M+ + C
Sbjct: 275 WCREQKAEEAEKILNEM---FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + + L D M G P+++ YN ++ C + + +
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE--PDVVTYNLLIRGQCIDGHIGSA 389
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR M +G D TYN++ + L K KV E + F + +P + T I
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + + A ++ G P + + + L + F +EML + +
Sbjct: 450 LCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS 509
Query: 241 DVTMQKLKKAFYNE 254
V + +NE
Sbjct: 510 TVNYTIVINRLFNE 523
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 33/202 (16%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT ++ + L + D H + +MV G+ P+ +N+++ C ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWR--PDAFTFNSLILGYCRTQQLEVAH 184
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE--------------- 166
F +M F G D+++Y + E + ++ E F EM + +
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAG 244
Query: 167 ----------------WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
W+PT A + + + E A +I N + ++G++P +
Sbjct: 245 RGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCT 304
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
+++ GR+S R E M
Sbjct: 305 IVVNAYCREGRMSGAVRVFESM 326
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA + F EM ++ PE +Y + + ++ + +AL+ + M P
Sbjct: 349 GRVFEALEMFDEMKQK-GIVPEQ-YSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ K +S +Q +++M G ++P+++ NAV+ L + + R F
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKG--IVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
++ G PD++TY M+ +C K K E F++MI+N P L + I L A
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A I+ + E + P + + N LL GL G++ +V EEM
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 571
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL-------------KFFSNALDIL 74
+V +Y + L + K+ DEA + L M+ E C P + S+A D+
Sbjct: 229 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 288
Query: 75 VKL----------------------NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
K+ DS +++W+ M G+N N++ Y AV+ LC
Sbjct: 289 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN--DNVVAYTAVIDALC 346
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
V FD+M G P+ +YN + +K + + F M + +P
Sbjct: 347 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + E AI+ + + GI+P + N +L GL GRL +R E+
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 466
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 11/269 (4%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F +M+E P+ VLA + + TL + + DEA + +K N PT ++
Sbjct: 493 EAVKIFYDMIEN-NCVPD-VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 550
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L + + L + M N PNLI YN ++ LC N V++ M
Sbjct: 551 LLAGLGREGKVKEVMHLLEEMYH--SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 608
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +YN + L+K ++ +E + F +M K P T + + +
Sbjct: 609 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKE 667
Query: 190 AIEIW-NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ I +Y L+ G +S + L+ G+ + FAE + + I + D + L
Sbjct: 668 ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI 727
Query: 249 KAFYNESRSMR-----DRFDSLERRWKTS 272
K + +++ +F S KT
Sbjct: 728 KHLCKQKKALEAHELVKKFKSFGVSLKTG 756
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EAL+ RVM + P+++ +S + K D TV LW +
Sbjct: 163 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD-VETV-LWLLRE 220
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ PN+ Y + +L D +R +M G PD +T+ ++ + L +
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M K++ +P + T + D + + +EIWN + +G +
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 340
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF-DSLE 266
++ L +GR+ + +EM + I+ + L F DRF D+LE
Sbjct: 341 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA-----DRFGDALE 391
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN+++ L + N +D F +M G PD TYN++ + + K+ ++ E+ EM
Sbjct: 757 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 816
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ ++ T + T I+ L+ + E AI+++ ++ G P + LL GL GR+
Sbjct: 817 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 876
Query: 223 SDVRRFAEEML 233
D EML
Sbjct: 877 EDAENLFNEML 887
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ +++++A+ + + PT + LD L+K L++
Sbjct: 826 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G N +YN ++ + + V F MV G PD +Y +I + L K
Sbjct: 886 MLEYGCK--ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ +F ++++ +P + I L + E A+ ++N + + GI+P +
Sbjct: 944 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1003
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTK 1029
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M + F P Y L L++ ++++A M C ++ L+
Sbjct: 852 MSQGFSPTP---CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 908
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ L+ MV G N P++ Y ++ LC +++ +F Q++ G PD +
Sbjct: 909 GNTEKVCHLFQDMVDQGIN--PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ + L K+K++ E + F+EM K P + I L A + A +++ +
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1027 LTKGWKPNVFTYNALIRG 1044
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV----DEALKFLRVMK 56
G K G + +A F EM+E A T L+ G ++ ++ + M
Sbjct: 869 GLLKAGRIEDAENLFNEMLEY------GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV 922
Query: 57 GENCFPTLKFFSNALDILVK---LNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
+ P +K ++ +D L K LND T+ QL ++ L P+LI YN ++ L
Sbjct: 923 DQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM------GLEPDLITYNLLIDGLG 976
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+ ++ F++M G P+ TYN + L K K E + E++ W+P
Sbjct: 977 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1036
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILP 204
I + + A + ++ G LP
Sbjct: 1037 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1068
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++ + + ++M G +TYN I L+K++++ + +
Sbjct: 788 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 847
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ ++ + PTP + LL A E A ++N +LE G N+LL G R
Sbjct: 848 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 907
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
G V ++M +N I Y + + L KA
Sbjct: 908 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 4/228 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F EM E P+ Y L + + +++E LK M + T ++
Sbjct: 774 AEGLFAEMKE-LGCGPDE-FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 831
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ LVK + L+ ++ GF+ P Y ++ L +++ F++M+ +
Sbjct: 832 ISGLVKSRRLEQAIDLYYNLMSQGFS--PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 889
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G + YN++ +V + F +M+ P + I L A +
Sbjct: 890 GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 949
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + +LE G+ P + N+L+ GL RL + EM + I+
Sbjct: 950 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y ++ + + V+ L LR M+ P + ++ + +L + ++
Sbjct: 195 VRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA 254
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P++I + ++ +LC+ + + F +M PD +TY + +
Sbjct: 255 KMENEGCK--PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGD 312
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N V ++ M + + + I L A+E+++ + + GI+P + S
Sbjct: 313 NGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 372
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ G R D + M
Sbjct: 373 YNSLISGFLKADRFGDALELFKHM 396
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + K+++EA+ M+ + P L +++ + L K + ++++
Sbjct: 965 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1024
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ PN+ YNA++ + D+ + + +M+ G P+S TY
Sbjct: 1025 ELLTKGWK--PNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 10/274 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVL---AYETFLITLIRGKQVDEALKFLRVMKGENC 60
K G+ EA+ F M WN A+ + L L + EA+ L +M +
Sbjct: 370 KSGHASEAHNVFCRM-----WNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGI 424
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L KL + L+D M G + P+L YN ++ VD
Sbjct: 425 DTDIGMYNMVFSALGKLKQVSFISTLFDKMKASG--IAPDLFTYNIMISSYGRVGLVDKA 482
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M PD +TYN + CL KN + E F EM + + P +T I
Sbjct: 483 SGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIEC 542
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+++ + A +++ ++ G +P + N+LL L G+ ++ + E M + +
Sbjct: 543 FGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLTPD 602
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+T L++ R+ R R S W S +
Sbjct: 603 SITYSILERLESRSQRTARIRKPSRVTSWVVSPL 636
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + VD+A + MK + C P ++ + + K + + +D
Sbjct: 221 IFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFD 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI YN V+ L N VD V +M+ P+ TY++ + L
Sbjct: 281 EMVSRGCAL--NLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILAT 338
Query: 149 NKKVHEV 155
++H +
Sbjct: 339 EGQLHRL 345
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A + MV++ P +V+ Y T + L + +QV+EAL M +
Sbjct: 188 GLCKVGNSRAAIRLLRSMVQK-NCEP-NVITYNTIIDCLFKDRQVNEALNIFSEMIAKGI 245
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L K ++ H L + MV +MPN++++ +V LC V
Sbjct: 246 SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD--SKIMPNVVIFTTLVDALCKEGMVTIA 303
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ G PD +TY + + ++ E + F M++ P ++ +T I
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A+ ++ + + ++P + N L+ GL ++GRL D EM+
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K+ ++ H L+D MVG GF PN + Y ++ LC + R MV P+
Sbjct: 159 KIGEALH---LFDKMVGEGFQ--PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPN 213
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TYN I +CL K+++V+E N F EMI P + I L E + + N
Sbjct: 214 VITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMN 273
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
++++ I+P L+ L G ++ + M+ R + VT L +
Sbjct: 274 EMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM-----DG 328
Query: 256 RSMRDRFDSLERRWKT 271
+R D ++ + T
Sbjct: 329 HCLRSEMDEADKVFDT 344
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 7/215 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM +R E P +++ Y T + L ++ +A+ M
Sbjct: 363 GYCKIQRIDKAMYLFEEMCQR-ELVP-NIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQ 420
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K + H Q ++ I G NL P++ YN V+ +C +++
Sbjct: 421 IPDLVTYRILLDYLCK---TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEA 477
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G PD TY ++ L + E F EM + P
Sbjct: 478 AGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITR 537
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
L +E AI++ +L G +AS L+V
Sbjct: 538 GFLRNNETLSAIQLLQEMLGRG-FSADASTITLIV 571
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 22/255 (8%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA +F M+ P V+ + L ++ K L + M +L S+
Sbjct: 57 EALSSFNRMLHM--QPPPSVVDFAKILTSIANMKHYSTVLSLSKQMD------SLGIPSD 108
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLM---------PNLIMYNAVVGLLCNNNDVDNV 120
+ + +N H + V GF+++ P+ + ++ LC +
Sbjct: 109 VYTLAIVINSFCHLNR-----VDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEA 163
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+MV G P+ +TY + L K M++ +P + T I
Sbjct: 164 LHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDC 223
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+ I++ ++ GI P ++ N ++ GL V EM++ +I+
Sbjct: 224 LFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283
Query: 241 DVTMQKLKKAFYNES 255
V L A E
Sbjct: 284 VVIFTTLVDALCKEG 298
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L + V A + VM P + ++ +D ++ +++D
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G PN+I Y+ ++ C +D F++M P+ +TYN + L
Sbjct: 344 TMVRKG--CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + FHEM+ + P + + L + A+ + I + + P S
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461
Query: 209 ANVLLVGLRNLGRL 222
N+++ G+ +G L
Sbjct: 462 YNIVIDGMCRVGEL 475
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 6/216 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + DEA K + M N P + + L K + + DIMV +GF
Sbjct: 163 LCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGF--C 220
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++ +NA++ L CN + +D+ + M P+ +TY+++ + + ++ E F
Sbjct: 221 PTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAF 280
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++ + P L C + L E + A + E G A+ N L+ G
Sbjct: 281 LEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCK 340
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
LGR+ + R EEM+ L Y V +Q L A
Sbjct: 341 LGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSA 376
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 3/215 (1%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+ R + P V +Y T + L ++ EA + L+ M P ++ L K
Sbjct: 74 LHRMDCKPNSV-SYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAG 132
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+L +M GF L + +N VV LC + D + + M+ P+ LT
Sbjct: 133 LLDEAFELMGVMESAGFAL--TAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILT 190
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
N+I K + E M++ + PT + + + + D+ + A E+ +
Sbjct: 191 LNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMA 250
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ P + ++++ +GR+ + R F E+++
Sbjct: 251 RSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLV 285
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
Q+D A + L M C P +S + ++ + +V G+ PNL++
Sbjct: 238 QMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYA--PNLLV 295
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
NA V LC ++D RF M G ++ TYN + E K ++ E E EMI
Sbjct: 296 CNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMI 355
Query: 164 KNEWQPTPLNCATAITMLLDADE 186
P + I L A +
Sbjct: 356 AEGSLPDSTTYSVLIQGLCSAGQ 378
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 9/209 (4%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
+ VDEA L M +C P ++ +D L + M G + PN
Sbjct: 64 ARLVDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRG--VAPNR 118
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YNA+ L +D F M G ++T+N + E L K+ K E
Sbjct: 119 VTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMET 178
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ +P L + A PE A+ + + ++E G P + N LL N +
Sbjct: 179 MLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQ 238
Query: 222 LSDVRRFAEEMLNRRI----LIYDVTMQK 246
+ E M + + Y + +QK
Sbjct: 239 MDSAAELLETMARSKCKPNFVTYSIMVQK 267
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 5/173 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + YN ++ LC++ + M G P+ +TYN + L K + E
Sbjct: 81 PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFEL 140
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M + T + + L + +P+ A ++ +L I P + N++L
Sbjct: 141 MGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCK 200
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
R + + M+ VT L + F N D+ DS +T
Sbjct: 201 AARPEEALGMTDIMVEMGFCPTIVTFNALLELFCN-----TDQMDSAAELLET 248
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 13/270 (4%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N E + +E PE + Y + L + +++AL L + EN L
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE--EAENGRGDLDT 429
Query: 67 F--SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F S+ ++ L + + D M G PN + NAV+ + +++ RFF
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCK--PNPHVCNAVINGFVRASKLEDALRFF 487
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
MV G FP +TYN + L K ++ E EM+ W+P + + + L
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+ +W LE G P N+++ GL + G++ D + EM R+ + VT
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 245 QKLKKAFYNESRSMRDR--FDSLERRWKTS 272
L + FY R +D + + W +S
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQSWSSS 637
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 7/209 (3%)
Query: 13 KTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
K F + E W E V +Y T + +L + + +ALK M P + +
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 222
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D K D + ++W+ ++ G ++ PN+ YN ++ LC D F + +M
Sbjct: 223 NILIDGFFKKGDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ D TY+ + L + + + EM +N P + T + L A
Sbjct: 282 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 341
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGL 216
E +E+W + + G + S N+L+ GL
Sbjct: 342 EECLELWKVMEKEGCRTV-VSYNILIRGL 369
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + R KQ D+A + L M + P + + ++ L K + ++L+D M
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKN 149
G + P++ YN ++ D+ N +++++ +P+ +YN++ L K
Sbjct: 211 PERG--VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K E +H M KNE +T I L + + A ++ + ENG+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 210 NVLLVGLRNLGRLSDVR---RFAEEMLNRRILIYDVTMQKL 247
N +L G GR+ + + E+ R ++ Y++ ++ L
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + + +A + FG MV + + V+ Y T + L + ++ EA ++ M +
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCF--PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L + + LW + GF P++ M+N ++ LC++ V++
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFK--PDVKMHNIIIHGLCSSGKVEDA 588
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ + +M P+ +T+N + E K + + ++++ W + NC
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS-WSSS--NC 639
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 29 VLAYETFLITLIRGKQV----DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
++A+ + ++ LIR ++ D AL ++ +N P ALDI ++++
Sbjct: 58 LVAHVSRIVELIRTQKCKCPEDVALTVIKAY-AKNSMP-----DQALDIFQRMHEI---- 107
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
F P + YN+++ L +N D FF G P+ TYN++ +
Sbjct: 108 ----------FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ K+ + + + M + + P + T I L A+++++ + E G+ P
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR-----RILIYDVTMQKLKKAF-YNESRSM 258
A N+L+ G G + + E +L I Y+V + L K ++ES +
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 259 RDRFDSLER 267
R ER
Sbjct: 278 WHRMKKNER 286
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A + M + +++P+ V Y + +L ++D ALK L + +NC
Sbjct: 167 GFCKMNRIDDATRVLDRMRSK-DFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L D M+ G L P++ YN ++ +C VD
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G+ PD ++YN++ L+ K E E +M + P + + IT
Sbjct: 283 FEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + E A+ + + E G+ P S + L+ GRL F E M++
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G + EA M E+ P+ +Y+ + R ++D A++FL M + C P
Sbjct: 345 RDGKIEEAMNLLKLMKEK-GLTPD-AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K + ++++ + +G + PN YN + L ++ D
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCS--PNSSSYNTMFSALWSSGDKIRALHM 460
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ +G PD +TYN + CL + V E +M E+ P+ + +
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E AI + ++ NG P E + VL+ G+ G ++ A +++ R I + +
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV-RIDAISEYS 579
Query: 244 MQKLKKAF 251
++L + F
Sbjct: 580 FKRLHRTF 587
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 21/254 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK--G 57
+ GN +E+ MV R +NP+ +L + LI+G + + +A++ + +++ G
Sbjct: 101 RSGNYIESLHLLETMV-RKGYNPDVILCTK-----LIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P + ++ ++ K+N ++ D M F+ P+ + YN ++G LC+ +
Sbjct: 155 Q---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKL 209
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + +Q++ P +TY ++ E + V E EM+ +P T
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR- 236
I + + A E+ + G P S N+LL L N G+ + + +M + +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 237 ---ILIYDVTMQKL 247
++ Y + + L
Sbjct: 330 DPNVVTYSILITTL 343
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 4/216 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V EA K EM+ R P+ + Y T + + + VD A + +R ++ + P +
Sbjct: 241 EGGVDEALKLMDEMLSR-GLKPD-MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L L+ +L M + PN++ Y+ ++ LC + ++
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD+ +Y+ + + ++ F MI + P +N T + L
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ + A+EI+ + E G P +S N + L + G
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ EA +T EM R + V T L TL R K+++EA K L +
Sbjct: 427 GYCKAGNMGEAFRTMDEM-GRKNMKMDSV-TLNTILRTLCREKKLEEAYKLLSSARKRGY 484
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F + + K + ++LWD M ++P+ + YN ++G LC +
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK--EIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++++ G PD TYN I + V + F ++M++N ++P C +
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L E A++++N + G + N L+ L GRL D EM
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA K EM E + P+ V++Y T + + ++ EA K L M +
Sbjct: 322 GLCNEGRIEEAFKLRDEM-ENLKLLPD-VVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 61 FPTLKFFSNAL--DILVK-------LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLL 111
P NA+ +I+VK ++D+++T+ M GF+ P+ + YN ++
Sbjct: 380 KP------NAVTHNIMVKWYCKEGKMDDASNTITK---MEESGFS--PDCVTYNTLINGY 428
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
C ++ FR D+M DS+T N I L + KK+ E K +
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
++ T I + A+++W+ + E I+P + N ++ GL G+ E
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548
Query: 232 MLNRRILIYDVTMQKLKKAFYNES 255
+L +L + T + + E
Sbjct: 549 LLESGLLPDETTYNTILHGYCREG 572
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 4/206 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GNV A K + EM E+ E P V Y + L + + ++A+ L +
Sbjct: 497 GYFKDGNVDRALKLWDEMKEK-EIIPSTV-TYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L + D Q + MV F P++ N ++ LC ++
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK--PDVFTCNILLRGLCMEGMLEKA 612
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ V G D++TYN + L K ++ + N EM + E P IT
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 181 LLDADEPEFAIEIWNYILENGILPLE 206
L D+ A E + +LE G LP +
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGXLPXQ 698
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 4/239 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E + EA K +R + E ++Y T ++ + VD ALK MK + P+
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDE--VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + L + + + + ++ G L+P+ YN ++ C DV+ F+F
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESG--LLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV + PD T N++ L + + F+ + + T IT L
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ A + + + E + P + N ++ L + GR+ + F +ML + L V
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 33 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV- 91
+T + ++ Q A + + MK P L + L+ LV+ S+H+V
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRY-PSSHSVSFSREAFN 197
Query: 92 -GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
I ++PN+ +N V+ C N + F + M + PD++TYN I + L K
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKG 257
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + + +M P + + A + + +N +LP + N
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ GL N GR+ + + +EM N ++L
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLL 345
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 2/186 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A++FL VM NC P ++ LD L K L M G L+PN YN
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG--LLPNRNTYNI 283
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+V C + + M + PD TYNM+ L ++ E EM +
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P ++ T I L+ + A ++ + E G+ P + N+++ G++ D
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403
Query: 227 RFAEEM 232
+M
Sbjct: 404 NTITKM 409
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 5/263 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + +A+ T +M E ++P+ V Y T + + + EA + + M +N
Sbjct: 395 KEGKMDDASNTITKM-EESGFSPDCV-TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMD 452
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ L L + +L G+ + + + Y ++ + +VD +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI--DEVSYGTLIVGYFKDGNVDRALKL 510
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+D+M P ++TYN I L + K + + +E++++ P T +
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A + N ++EN P + N+LL GL G L + +++ I VT
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630
Query: 244 MQKLKKAFYNESRSMRDRFDSLE 266
L + E R + D F+ L
Sbjct: 631 YNTLITSLCKEGR-LDDAFNLLS 652
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 1/173 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+N P+ + YN ++ LC + + M G P+ TYN++ K + E
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
N M +N P I L + E A ++ + + +LP S N L+
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
G ++S+ + EEM + + VT + K + E + M D +++ +
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK-MDDASNTITK 408
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 6/231 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P L Y + L + K++D+AL + M P ++ L L +
Sbjct: 4 YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 63
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
L++ MV N PN++ YN ++ LC ++ + F +M G P ++YN +
Sbjct: 64 RLLFEKMVKQRIN--PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 121
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ K K + ++ F +M+++ P + T I L + + + A E+ + +++ G+
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 181
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
P A+ + L+ G + R+ + + E+M+ + I + Y++ + L +A
Sbjct: 182 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 232
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +E V EA F +MV++ NP +V+ Y T + L + +++ A + + M G+
Sbjct: 53 GLCQEEKVEEARLLFEKMVKQ-RINP-NVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 110
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT ++ +D K D ++D MV N +PN++ Y ++ L + V
Sbjct: 111 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR--SNCVPNVVTYTTLIDGLSKSGKVQAA 168
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D MV G P+ TY+ + + K ++V E +M+ PT + +
Sbjct: 169 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 228
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L AD+ E A +++ + + P + N LL L + +L R EM+ +
Sbjct: 229 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 5/237 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + A + F EM + + P V +Y T + + K + A M NC
Sbjct: 88 GLCKAWRIETAYELFKEMAGK-GYVPTEV-SYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 145
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K ++ D MV G + PN+ Y+ ++ C VD
Sbjct: 146 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG--VTPNVATYSCLIDGFCKVRRVDEA 203
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +QMV G P +TYN++ L + K+ + F M + PT + T +
Sbjct: 204 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 263
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-LNRR 236
L + + A ++ ++ G P + + L GL G++ + + E+M L +R
Sbjct: 264 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 320
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K + +A T EM R P+ + Y L L + ++V+EA M + P
Sbjct: 21 KTKRIDDALATVEEMATR-GIKPDAFI-YNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 78
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ L K +L+ M G G+ +P + YN ++ C D+
Sbjct: 79 VVTYNTLINGLCKAWRIETAYELFKEMAGKGY--VPTEVSYNTLIDGFCKKKDLVAAKDV 136
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV P+ +TY + + L K+ KV M+K P + I
Sbjct: 137 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 196
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A ++ ++ GI P + N+LL L +L D + M RR VT
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 256
Query: 244 MQKLKKAFYNESR 256
L +A + +
Sbjct: 257 YNTLLRALCHHKQ 269
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
A PD+LTY I E L K K++ + EM +P ++ L ++ E A
Sbjct: 5 APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 64
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++ +++ I P + N L+ GL R+ +EM + + +V+ L F
Sbjct: 65 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 252 YNESR--SMRDRFDSLER 267
+ + +D FD + R
Sbjct: 125 CKKKDLVAAKDVFDKMVR 142
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ EA +T EM R + V T L TL R K+++EA K L +
Sbjct: 427 GYCKAGNMGEAFRTMDEM-GRKNMKMDSV-TLNTILRTLCREKKLEEAYKLLSSARKRGY 484
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F + + K + ++LWD M ++P+ + YN ++G LC +
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK--EIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++++ G PD TYN I + V + F ++M++N ++P C +
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L E A++++N + G + N L+ L GRL D EM
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA K EM E + P+ V++Y T + + ++ EA K L M +
Sbjct: 322 GLCNEGRIEEAFKLRDEM-ENLKLLPD-VVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 61 FPTLKFFSNAL--DILVK-------LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLL 111
P NA+ +I+VK ++D+++T+ M GF+ P+ + YN ++
Sbjct: 380 KP------NAVTHNIMVKWYCKEGKMDDASNTITK---MEESGFS--PDCVTYNTLINGY 428
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
C ++ FR D+M DS+T N I L + KK+ E K +
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
++ T I + A+++W+ + E I+P + N ++ GL G+ E
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548
Query: 232 MLNRRILIYDVTMQKLKKAFYNES 255
+L +L + T + + E
Sbjct: 549 LLESGLLPDETTYNTILHGYCREG 572
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E + EA K +R + E ++Y T ++ + VD ALK MK + P+
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDE--VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + L + + + + ++ G L+P+ YN ++ C DV+ F+F
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESG--LLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV + PD T N++ L + + F+ + + T IT L
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A + + + E + P + N ++ L + GR+ + F +ML +
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GNV A K + EM E+ E P V Y + L + + ++A+ L +
Sbjct: 497 GYFKDGNVDRALKLWDEMKEK-EIIPSTV-TYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L + D Q + MV F P++ N ++ LC ++
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK--PDVFTCNILLRGLCMEGVLEKA 612
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ V G D++TYN + L K ++ + N EM + E P IT
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
L D+ A E + +LE G LP
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGNLP 696
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 33 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV- 91
+T + ++ Q A + + MK P L + L+ LV+ S+H+V
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRY-PSSHSVSFSREAFN 197
Query: 92 -GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
I ++PN+ +N V+ C N + F + M + PD++TYN I + L K
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKG 257
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + + +M P + + A + + +N +LP + N
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ GL N GR+ + + +EM N ++L
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLL 345
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 2/186 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A++FL VM NC P ++ LD L K L M G L+PN YN
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG--LLPNRNTYNI 283
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+V C + + M + PD TYNM+ L ++ E EM +
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P ++ T I L+ + A ++ + E G+ P + N+++ G++ D
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403
Query: 227 RFAEEM 232
+M
Sbjct: 404 NTITKM 409
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 5/263 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + +A+ T +M E ++P+ V Y T + + + EA + + M +N
Sbjct: 395 KEGKMDDASNTITKM-EESGFSPDCV-TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMD 452
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ L L + +L G+ + + + Y ++ + +VD +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI--DEVSYGTLIVGYFKDGNVDRALKL 510
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+D+M P ++TYN I L + K + + +E++++ P T +
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR 570
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A + N ++EN P + N+LL GL G L + +++ I VT
Sbjct: 571 EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630
Query: 244 MQKLKKAFYNESRSMRDRFDSLE 266
L + E R + D F+ L
Sbjct: 631 YNTLITSLCKEGR-LDDAFNLLS 652
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 1/173 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+N P+ + YN ++ LC + + M G P+ TYN++ K + E
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
N M +N P I L + E A ++ + + +LP S N L+
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
G ++S+ + EEM + + VT + K + E + M D +++ +
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK-MDDASNTITK 408
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 121/294 (41%), Gaps = 41/294 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM ER VL + T + L R ++DEAL+ + M GE C
Sbjct: 8 GFCKAGQVDQAFELLDEMKER--GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEEC 64
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIM---VGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ ++ L K N ++L+D M P++I Y+ V+ LC V
Sbjct: 65 SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 124
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP-------- 169
D + +F +M G P+ +TY+ + + L K +V E + ++ + P
Sbjct: 125 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAV 184
Query: 170 --------TPLNCATAI---------------TMLLDA----DEPEFAIEIWNYILENGI 202
P C + +L A DE E A + + +L++G
Sbjct: 185 VNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK 244
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + NV + GL G++ + R EM+ ++ +T + F R
Sbjct: 245 KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 23/254 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + EMVE + P+ V+ Y + + + ++D+A M C
Sbjct: 257 GLCKAGKVDEAYRILLEMVES-KVTPD-VITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F L + S ++ + MV GF +P L YN ++ +C + V++
Sbjct: 315 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF--IPGLQTYNVLMDCVCGADSVESA 372
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M PD+ TY + +CL + ++V E + F M + P C + +
Sbjct: 373 LEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 432
Query: 181 L------------LD-------ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
L LD A EP+ A+E+ ++ G+ P EA+ +L L L R
Sbjct: 433 LCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDR 492
Query: 222 LSDVRRFAEEMLNR 235
+ E+M +R
Sbjct: 493 VDSAIAEFEKMASR 506
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +VDEA L +KGE+ P +++ ++ + + ++L
Sbjct: 142 NVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELL 201
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M GF + N+I +NA++ L N++ + +FF++++ G P+ +TYN+ L
Sbjct: 202 LHMKEKGFGI--NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 259
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K KV E EM++++ P + ++ I A + A +++ ++ + +P
Sbjct: 260 KAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 319
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ LL G + + R E+M+N
Sbjct: 320 TFMTLLHGFSEHKKSREAFRVHEDMVN 346
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 18/189 (9%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L R ++VDEA +FL VM+ +N P +++L K + + D +V
Sbjct: 391 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 450
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
I C + D +QMV G PD TY + L +
Sbjct: 451 EI------------------CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDR 492
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V F +M P + I AD + A I+ ++ G P +
Sbjct: 493 VDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRT 552
Query: 212 LLVGLRNLG 220
L LR+ G
Sbjct: 553 LSSCLRDAG 561
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
MY V+ C VD F D+M G D L ++ + + L + ++ E F M
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWN-----YILENGILPLEASANVLLVGLR 217
E P + T + L A+ + +E+++ Y +G P S + ++ L
Sbjct: 61 -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119
Query: 218 NLGRLSDVRRFAEEM 232
R+ + + M
Sbjct: 120 KAQRVDKAYEYFKRM 134
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 4/272 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G+V EA+ F +M +E A+ + L L + EA+ L +M +
Sbjct: 369 SKSGHVSEAHNVFCQMWNSYETGDRD--AFVSMLEVLCNSGKTLEAIDLLHMMPEKGVAT 426
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L KL + L+D M G + P+L YN ++ VD
Sbjct: 427 DVGMYNMVFSALGKLKQVSFITSLFDKMKANG--IAPDLFTYNIMISSYGRVGLVDKASG 484
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+ M PD +TYN + CL KN + E F EM + + P + I
Sbjct: 485 LFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFG 544
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+++ + A ++ ++ G +P + N+LL L G+ ++ + E M + + +
Sbjct: 545 KSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSI 604
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
T L++ R++R R + W S +
Sbjct: 605 TCSILERLESRSQRTVRIRKPARATSWVVSPL 636
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y L L + VD+A + MK + C P ++ + + + ++ + +D
Sbjct: 221 IFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFD 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI YN ++ L N VD V +M+ G P+ TY++ + L K
Sbjct: 281 EMVSKGCAL--NLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAK 338
Query: 149 NKKVHEV 155
++H +
Sbjct: 339 EGQLHRL 345
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ L +R ++V + + M+ + + ++ LD L K Q+++ M
Sbjct: 189 YKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMK 248
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
P+ Y ++ + FFD+MV G + + YN + E L KNK
Sbjct: 249 QKYCE--PDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKM 306
Query: 152 VHEVENFFHEMIKNEWQP 169
V +V +MI+ QP
Sbjct: 307 VDKVIFVLSKMIEGGCQP 324
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G V EA +M + E +P HV + +R +++EA+ F R M+ +
Sbjct: 438 GLSKQGRVDEALGIVHQMDKYGCELSP-HVC--NPLINGFVRASKLEEAICFFREMETKG 494
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C PT+ ++ ++ L K + M+ + P++I Y+ ++ LC +D
Sbjct: 495 CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWK--PDMITYSLLMDGLCQGKKIDM 552
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ Q++ G PD +N++ L K+ + + M ++ P + T +
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L A E E A IW + +NG P S N+ L GL + GR+SD ++ L IL
Sbjct: 613 GLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILP 672
Query: 240 YDVTMQKLKKA 250
+T L +A
Sbjct: 673 TSITWYILVRA 683
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 2/222 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L + +++ALK L+ K +S+ +D L K + + M
Sbjct: 396 TYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQM 455
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L P++ N ++ + ++ FF +M G P ++YN + L K +
Sbjct: 456 DKYGCELSPHVC--NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAE 513
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +F EM++ +W+P + + + L + + A+ +W +L G+ P N
Sbjct: 514 RFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHN 573
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+L+ GL + G++ D M L VT L Y
Sbjct: 574 ILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY 615
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + + EA F EM E +P V++Y T + L + ++ +A F++ M ++
Sbjct: 473 GFVRASKLEEAICFFREM-ETKGCSPT-VVSYNTLINGLCKAERFSDAYSFVKEMLEKDW 530
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L + + LW ++ G L P++ M+N ++ LC+ +++
Sbjct: 531 KPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG--LEPDVTMHNILMHGLCSAGKIEDA 588
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M P+ +T+N + + L K ++ + M KN +QP ++ +
Sbjct: 589 LLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKG 648
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L I +++ L+NGILP + +L+ + LG L +
Sbjct: 649 LCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSL 693
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 100/221 (45%), Gaps = 4/221 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E N++E ++F E P ++ Y + ++ +Q EA L M ++ P +
Sbjct: 126 EANLLEKAESFLAYFETVGILP-NLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDV 184
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ ++ +VK D ++++D M G L+P+++ YN ++ D +
Sbjct: 185 YSYGTVINGMVKSGDLVSALEVFDEMFERG--LVPDVMCYNIMIDGFFKRGDYVQGKEIW 242
Query: 125 DQMVFHGA-FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+++V +P+ +TYN++ L K + E + M KNE + ++ I L D
Sbjct: 243 ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCD 302
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ A+E++ +++ ++ + N LL G G++ +
Sbjct: 303 VGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKE 343
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 25 NPEHVLAYETFLITLIR---GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
P + + FL+ L R K V + + ++K + C T L K
Sbjct: 36 QPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPN 95
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ + M I F P + YNA++ N ++ F G P+ TYN+
Sbjct: 96 EALDCFQKMEEI-FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNI 154
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + +K ++ E + M + +P + T I ++ + + A+E+++ + E G
Sbjct: 155 LIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERG 214
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-----ILIYDVTMQKL-KKAFYNES 255
++P N+++ G G + E ++ ++ Y+V + L K ++ES
Sbjct: 215 LVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDES 274
Query: 256 RSMRDR 261
M +R
Sbjct: 275 LEMWER 280
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 123/280 (43%), Gaps = 35/280 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN +A EM+ R P V+ Y + + ++ + ++ A++FL M+
Sbjct: 319 GYCKEGNFHQALVMHAEML-RHGLTPS-VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 61 FPTLKFFSNALD-------------ILVKLNDS--THTVQLWDIMV-----------GIG 94
P + ++ +D +L ++ND+ + +V ++ ++ I
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 95 F-------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L P+++ Y+ V+ C + DVD R +MV G PD++TY+ + +
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ ++ E + + EM++ P I + E A+++ N ++E G+LP
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ +VL+ GL R + +R ++ + DVT L
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 25/269 (9%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A +M E+ +P+ V++Y T L R VDEAL+ R M + P
Sbjct: 429 GKMEDAIAVLEDMKEK-GLSPD-VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S+ + + + L++ M+ +G L P+ Y A++ C D++ + +
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVG--LPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G PD +TY+++ L K + E + ++ E P+ + T T++ +
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV---TYHTLIENCS 601
Query: 186 EPEF------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
EF A +++ +L P + N+++ G G +
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+EM+ L++ VT+ L KA + E +
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+ A F EM+E + +P +V Y + +D AL M+ + C P +
Sbjct: 185 NISFAENVFKEMLES-QVSP-NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ +D KL +L M G L PNLI YN V+ LC + V +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKG--LEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G D +TYN + + K H+ EM+++ P+ + + I + A
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A+E + + G+ P E + L+ G G +++ R EM
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P++I Y +++ +C +++ F DQM G P+ TY + + + ++E
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
EM N + P+ + I + E AI + + E G+ P S + +L G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ + R EM+ + I +T L + F + R+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK-VHEVENFFHEMIKNEWQPTPLNCA 175
+D HG P L+YN + + I++K+ + EN F EM++++ P
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEE 231
I A + A+ +++ + G LP + N L+ G L ++ D +R A +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 232 MLNRRILIYDVTMQKL 247
L ++ Y+V + L
Sbjct: 270 GLEPNLISYNVVINGL 285
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 40/247 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ F + E ++ ++ + + R +D+AL + + + P + ++
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 71 LDILVKLNDSTHTVQLWDIMVG--IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
LD ++ S + + + + + PN+ YN ++ C ++D FD+M
Sbjct: 176 LDATIR---SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G P+ +TYN + + K +K+ + M +P +
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI---------------- 276
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
S NV++ GL GR+ +V EM R + +VT L
Sbjct: 277 -------------------SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 249 KAFYNES 255
K + E
Sbjct: 318 KGYCKEG 324
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KEGEMRRAQSVF-DAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L++ M+ G L+PN + + ++ + C N VD+
Sbjct: 206 VYTYSVLINGLCKESKVDEANELFNEMLDRG--LVPNGVTFTTLIDVHCKNGMVDSAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD +TYN + L K + +V EM N +P + T I
Sbjct: 264 YKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + K + ++D + G L P+++ +N ++ D
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWG--LRPSVVSFNTLMNGYIRLGD 186
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D FR M G PD TY+++ L K KV E F+EM+ P + T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + + A+EI+ +L G P + N L+ GL G L VR +EM
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + +VDEA + M P F+ +D+ K ++++
Sbjct: 206 VYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYK 265
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ GF+ P+LI YN ++ LC D+ V D+M +G PD +TY + + K
Sbjct: 266 QMLSQGFS--PDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCK 323
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ F MIK + + ++ L + A +++ +L G+ P +
Sbjct: 324 EGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGT 383
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
+++ G + R +EM
Sbjct: 384 YTMIINEFCKKGDVRTASRLLKEM 407
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 72/204 (35%), Gaps = 39/204 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE V EAN+ F EM++R P V + T + + VD A++ + M +
Sbjct: 215 GLCKESKVDEANELFNEMLDR-GLVPNGV-TFTTLIDVHCKNGMVDSAMEIYKQMLSQGF 272
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K D L D M G L P+ I Y ++ C D++
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG--LKPDKITYTTLIDGCCKEGDLETA 330
Query: 121 FRF-----------------------------------FDQMVFHGAFPDSLTYNMIFEC 145
F F F +M+ G PD+ TY MI
Sbjct: 331 FEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINE 390
Query: 146 LIKNKKVHEVENFFHEMIKNEWQP 169
K V EM ++ P
Sbjct: 391 FCKKGDVRTASRLLKEMQRDGHVP 414
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A + M + +++P+ V Y + +L ++D ALK L + +NC
Sbjct: 167 GFCKMNRIDDATRVLDRMRSK-DFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L D M+ G L P++ YN ++ +C VD
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG--LKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD ++YN++ L+ K E E +M + P + + IT
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + E A+ + + E G+ P S + L+ GRL F E M++
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G + EA M E+ P+ +Y+ + R ++D A++FL M + C P
Sbjct: 345 RDGKIEEAMNLLKLMKEK-GLTPD-AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K + ++++ + +G + PN YN + L ++ D
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCS--PNSSSYNTMFSALWSSGDKIRALHM 460
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ +G PD +TYN + CL + V E +M E+ P+ + +
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E AI + ++ NG P E + VL+ G+ G ++ A +++ R I + +
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV-RIDAISEYS 579
Query: 244 MQKLKKAF 251
++L + F
Sbjct: 580 FKRLHRTF 587
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 4/216 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V EA K EM+ R P+ + Y T + + + VD A + +R ++ + C P +
Sbjct: 241 EGGVDEALKLMDEMLSR-GLKPD-MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L L+ +L M + PN++ Y+ ++ LC + ++
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD+ +Y+ + + ++ F MI + P +N T + L
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ + A+EI+ + E G P +S N + L + G
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 21/254 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK--G 57
+ GN +E+ MV R +NP+ +L + LI+G + + +A++ + +++ G
Sbjct: 101 RSGNYIESLHLLETMV-RKGYNPDVILCTK-----LIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P + ++ ++ K+N ++ D M F+ P+ + YN ++G LC+ +
Sbjct: 155 Q---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKL 209
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + +Q++ P +TY ++ E + V E EM+ +P T
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR- 236
I + + A E+ + G P S N+LL L N G+ + + +M + +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 237 ---ILIYDVTMQKL 247
++ Y + + L
Sbjct: 330 DPNVVTYSILITTL 343
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMK--GENCFPTLKFFSNALDILVKLNDSTHTVQ 85
HV +Y L L + EAL+ L +M G +C P + +S +D L K DS
Sbjct: 168 HVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYS 227
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ G ++P+++ YN +V LC +D ++MV +G PD +TYN I
Sbjct: 228 TYHEMLERG--ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHG 285
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + E +M + +P + + + L A +I + +++ G+ P
Sbjct: 286 YCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPN 345
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + LL G G L ++R + M+ I
Sbjct: 346 VITYSTLLHGYATKGALVEMRDLLDLMVRNGI 377
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 15/270 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNV++ G VE + P L +L K+ A+ LR M
Sbjct: 117 GFAGLGNVIKK----GYRVEPIIFTP--------LLKSLCAEKRTSNAMNIVLRRMTELG 164
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ L L + S ++L +M G + P+++ Y+ ++ L D D
Sbjct: 165 CAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDK 224
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + +M+ G PD +TYN I L K + + + + + M+KN P + + +
Sbjct: 225 AYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVH 284
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + + AI I + +G+ P + L+ L GR + R+ + M+ R +
Sbjct: 285 GYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKP 344
Query: 240 YDVTMQKLKKAFYNESR--SMRDRFDSLER 267
+T L + + MRD D + R
Sbjct: 345 NVITYSTLLHGYATKGALVEMRDLLDLMVR 374
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG+ +A T+ EM+ER P+ V+ Y T + L + + +D+A+ L M
Sbjct: 215 GLFKEGDSDKAYSTYHEMLERGIL-PD-VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGV 272
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + S + + + M G P+ + Y +++ LC N
Sbjct: 273 MPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVE--PDAVTYTSLMDYLCKNGRCIEA 330
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D M+ G P+ +TY+ + + E+ + M++N QP + I
Sbjct: 331 RKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICA 390
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ A+ +++ + + + P + L+ GL GR+ D
Sbjct: 391 CTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 3/233 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-P 62
K + EA + M + +Y + L +L + K+V +A M E F P
Sbjct: 421 KADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVP 480
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K+++ +L+ M I N +PN+ YNA + L + +
Sbjct: 481 DVVSYSILIDGFCKIDELGRAEKLYKQM--IDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+++MV G PD +TY+ + +K + F MI +P + + L
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+P+ A E++ ++E G P + LL G N+G++ +EM+++
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 8/234 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A K + +M++ P +V Y FL L+R ++ +A M C
Sbjct: 491 GFCKIDELGRAEKLYKQMID-LNCVP-NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 61 FPTLKFFSNALD--ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + +S + L + +D H +L++ M+ G PN + YN ++ LC + D
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAH--ELFETMISRGCR--PNAVTYNCLLHGLCKESKPD 604
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +MV G PD +TY + K+ + F EM+ P + +
Sbjct: 605 EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A +P A +++ ++ P S N+++ GL RL D E M
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 46/267 (17%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+ EA K F EM + P + +A+ FL L + ++++A + R M+ +L
Sbjct: 284 NLDEAFKLFLEMAVESKA-PLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-----ESLSS 337
Query: 67 FSNALDILVKL-NDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
D+L++L +S + + + I G N+ P+ ++V+ LC VD+
Sbjct: 338 SQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLL 397
Query: 125 DQMVFHGAFPDSLT-------------------------------------YNMIFECLI 147
+ M+ G PD T YN + L
Sbjct: 398 ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLC 457
Query: 148 KNKKVHEVENFFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K KKVH+ F M+ + + P ++ + I DE A +++ +++ +P
Sbjct: 458 KAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 517
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEML 233
+ N L GL GR++D + EEM+
Sbjct: 518 TTYNAFLNGLMRKGRIADAQGVYEEMV 544
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA++ F +MVER +P+ V Y T L ++++A++ M +
Sbjct: 596 GLCKESKPDEAHELFRKMVER-GCDPDRV-TYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 653
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L + QL+ +MV P+ + +N ++ L +D+
Sbjct: 654 DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVS--RQCKPDTVSHNIMIDGLSKAKRLDDA 711
Query: 121 FRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F++M HG PD +TYN + L +++ E F E+ + + P P A
Sbjct: 712 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP----HAFN 767
Query: 180 MLLDA 184
+LL+A
Sbjct: 768 VLLEA 772
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EAL F R ++ N + ++ LD L++ D Q+++ MV G ++PN Y
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG--VVPNGFTYAV 169
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+V C + D RFF +MV G P S Y + ECL K E F
Sbjct: 170 LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVF 222
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A + F EMV + +P+ V+AY L R + EA + +VM C
Sbjct: 631 GFCNVGKIEQAVEVFDEMVSK-GHDPD-VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D L K V++++ M P+L+ YN+++ LC +
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ-DHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ F ++ PD +N++ E IK V++ E F +
Sbjct: 748 MKVFKEIDRLKLSPDPHAFNVLLE-AIKCGIVYQFEIRFKD 787
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
N ++ YN ++ L + D+ + F++MV G P+ TY ++ + + E
Sbjct: 124 NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEA 183
Query: 156 ENFFHEMIKNEWQPT 170
FF EM+ ++P+
Sbjct: 184 VRFFGEMVDKGFKPS 198
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 5/233 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W+P + ++ + +R + E R + C P++ + L+ L+KLN
Sbjct: 177 WDP---VIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQC 233
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
Q++ M +G + PN +N + + C + DVD V F ++M G PD +TYN +
Sbjct: 234 WQVYKEMARVGIH--PNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLI 291
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
C + ++ + + M + P ++ + L + A ++++ ++ G+
Sbjct: 292 SCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLN 351
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P S N L+ G G++ + R EM+ I VT Q L + + E+R
Sbjct: 352 PDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEAR 404
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V EA++ F M+ R NP+ ++++ T + + ++ E+ L M G
Sbjct: 328 GLCKEGKVREAHQLFHRMIHR-GLNPD-IVSFNTLICGYCKEGKMRESRSLLHEMIGSGI 385
Query: 61 FP---TLKFF----------SNALDILVKLN--DSTHTVQLWD-IMVGI----------- 93
P T + +AL+++V+L + ++D +MV I
Sbjct: 386 CPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKS 445
Query: 94 --------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
G+ +P + +YN ++ LC ++ + + +M P ++TY + C
Sbjct: 446 LLQRISQRGY--VPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICC 503
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
L + + E E+ EM+++ P P C
Sbjct: 504 LCRTSRSMEAESLMEEMLQSGMLPDPDIC 532
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 34 TFLITLIR-GKQVDEALKFL----RVMK----GENCFPTLKFFSNALDILVKLNDSTHTV 84
FL+ ++ K+ EA+KFL +++K E+ F TL F + + D
Sbjct: 129 CFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKA 188
Query: 85 QLWDIMVGIGFN---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ + M+ GF +P++I N ++ L N +D ++ + +M G P+
Sbjct: 189 YVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPN 248
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
S T+N++ ++ V +V +F M + ++P + T I+ + A ++
Sbjct: 249 SYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYR 308
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ +LP S L+ GL G++ + + M++R
Sbjct: 309 IMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHR 348
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 3/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA + EM ER V+ Y T + + + +AL+ L M+ +
Sbjct: 322 GLCQAGKVDEAFRLKDEM-ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL + + L K + + + G L P++I YN ++ C +V
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG--LAPDVITYNTLIDAYCKAGNVAKA 438
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+MV G D+ T N + L K K+ + E H + + P ++ T +
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
PE A+ +W+ ++E ++P ++ N L+ GL + RL + E++ + ++
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPD 558
Query: 241 DVTMQKLKKAFYNE 254
+ T + A+ E
Sbjct: 559 ETTYNIIIHAYCKE 572
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V +Y T + + + AL+ M P++ ++ + L ++ +
Sbjct: 487 PDEV-SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAID 545
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ +V G L+P+ YN ++ C D++N FRF ++MV + PD +T N +
Sbjct: 546 KLNELVEKG--LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + K+ + F ++ + + T I + + + A+ ++ + G+ P
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ NV+L L GR + ++ + L LK + +E+
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 68/181 (37%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L+ + L L + + L I L PN +N +V C+ + +
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
M G PD++TYN + + + E M ++ PT T ++
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ + G P + NVL VGL G++ + R +EM + D
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPD 348
Query: 242 V 242
V
Sbjct: 349 V 349
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
+L + +++EAL L + E P + ++ +D K + L D MVG G +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 98 ---------------------------------MPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+P+ + Y V+ + + R +
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
DQM+ P TYN + + L + +++ E + +E+++ P I
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIY 240
+ E A N ++EN P + N L+ GL G+L + E + + ++ Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 241 DVTMQKLKK 249
+ +Q + K
Sbjct: 633 NTLIQSMCK 641
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GNV K F EM +R + P+ V Y + + L + +V EA K M +
Sbjct: 366 GFGKSGNVSVEYKLFDEM-KRKKIVPDFV-TYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + L + MV G L PN++ Y A+V LC +VD
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG--LTPNVVTYTALVDGLCKCGEVDIA 481
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G P+ TYN + L K + + EM + P + T +
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A E+ +L+ G+ P + NVL+ G G L D R + ML++ I+
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Query: 241 DVTMQKLKKAF 251
T L K +
Sbjct: 602 ATTFNSLMKQY 612
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 112/291 (38%), Gaps = 39/291 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G VVEA K F EM+ + P+ V Y + + ++ EA M +
Sbjct: 401 GLCQAGKVVEARKLFSEMLSK-GLKPDEV-TYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K + +L M G L PN+ YNA++ LC +++
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG--LQPNVCTYNALINGLCKVGNIEQA 516
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN------- 173
+ ++M G FPD++TY I + K ++ + M+ QPT +
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576
Query: 174 -CATA--------ITMLLDA-------------------DEPEFAIEIWNYILENGILPL 205
C + I +LD + IEI+ + G++P
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N+L+ G + + +EM+ + + + L K FY +
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA+ +M F N V++Y + + +Q+ + LK + ++ + P
Sbjct: 266 GKVKEAHSLLIQM--EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQY 323
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+++ + L K Q+ +M + P+ ++Y ++ + +V ++ FD
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQ--RIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TY + L + KV E F EM+ +P + I A
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAG 441
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E + A + N ++E G+ P + L+ GL G + EM
Sbjct: 442 EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P+++ Y+ +V C + V + +++ G P+ TYN I L K +V E E
Sbjct: 284 VPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
M P + T I+ + ++++ + I+P + ++ GL
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLC 403
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
G++ + R+ EML++ + +VT L Y ++ M++ F
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG-YCKAGEMKEAFS 448
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 8/246 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V AN+ EM E+ P +V Y + L + +++A+K + M
Sbjct: 471 GLCKCGEVDIANELLHEMSEK-GLQP-NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP ++ +D K+ + +L IM+ G L P ++ +N ++ C + +++
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG--LQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R M+ G P++ T+N + + + + M P I
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
A + A + ++E G AS N L+ G + + R+ EEM +
Sbjct: 647 HCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAE 706
Query: 239 --IYDV 242
IYD+
Sbjct: 707 KEIYDI 712
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 12/236 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G+ EG V +A +M NP+ V T+ + LIRG+ +D A + LR+M+
Sbjct: 190 GFCNEGKVHKAMTLLNKM-RACGVNPDAV----TYNL-LIRGQCIDGHIESAFRLLRLME 243
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
G+ ++ ++ L K + L+D + G PN + +N+++ LC +
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK--PNAVTFNSLINGLCKSGK 301
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
D ++F ++MV G PD+ TY+ E L K K E +F EM++ + +P+ +N
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I LL W ++ +G P + + GRL++ EM
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 94/257 (36%), Gaps = 8/257 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + FGEM + + Y + L ++ +E L LR MK
Sbjct: 54 GLCEAGRIDEAVELFGEM------DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGW 107
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ +D + + ++ M G L P ++ AV+ C + +
Sbjct: 108 RPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG--LAPCVVTCTAVINAYCKEGRMSDA 165
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R + M G P+ TYN + + KVH+ ++M P + I
Sbjct: 166 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 225
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A + + +G++ + + N L+ L GR + + R I
Sbjct: 226 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 285
Query: 241 DVTMQKLKKAFYNESRS 257
VT L ++
Sbjct: 286 AVTFNSLINGLCKSGKA 302
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 8/250 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E EA + EM E+ V+ + + ++ +AL+ L +MK C P
Sbjct: 123 RERKAKEAEEMLQEMFEK--GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + + L + M G N P+ + YN ++ C + +++ FR
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN--PDAVTYNLLIRGQCIDGHIESAFRL 238
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M G D TYN + L K+ + + + F + +P + + I L
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LI 239
+ + + A + ++ G P + + + L + + F EML + + +
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358
Query: 240 YDVTMQKLKK 249
Y + + KL K
Sbjct: 359 YTIVIHKLLK 368
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G +A F + R P V + + + L + + D A KFL M C P
Sbjct: 263 KDGRTDQACSLFDSLETR-GIKPNAV-TFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 320
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S+ ++ L K+ S + M + ++ P+ + Y V+ L + V R
Sbjct: 321 TYTYSSFIEHLCKMKGSQEGLSFIGEM--LQKDVKPSTVNYTIVIHKLLKERNYGLVART 378
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+ +MV G PD +TY +++E EN EM KN
Sbjct: 379 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 420
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A + EM +R P V + + L + + +AL + + + G C
Sbjct: 39 GLCKAGKLDQAYELLDEMRDR--GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKC 96
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D LVK Q+++ M +PN++ Y V+ LC + +D
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESM-HTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M G P+ +TY+++ E L K + + EM + +QP + T +
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
L + + A+E+ ++ +G P + N L+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 9/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
G K G +A F + V + P+ ++ + + L++ +V+EA + M
Sbjct: 74 GLCKAGRFGDALGYF-KTVAGTKCTPD-IITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ ++ L K ++L D+M G PN+I Y+ +V LC D
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG--CCPNVITYSVLVEGLCKAGRTDK 189
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD + YN + L K++++ E MI++ PT + + +
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
+ + + + A + + E G P + N ++ GL RL D + ++M+ R
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 237 -ILIYDVTMQKLKK 249
++ Y + L K
Sbjct: 310 DVITYSTIIDGLCK 323
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK- 76
M ER P V+ Y T + L R ++D+A L+ M C P + +S +D L K
Sbjct: 267 MSER--GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD 324
Query: 77 -LNDST----HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
D+ ++ ++M G PN Y V+ LC +M+
Sbjct: 325 WRVDADWKLEAACEILEMMKQTGCP--PNAGTYAVVIEGLCRARKSQQALALLRRMIDSE 382
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD +++M+ L K+ + F M + E +P P+ A I L E + A+
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ ++E+ P A+ N +L GL +GR+ + R E M+++
Sbjct: 443 RVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 40/252 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA + F M + P +V+ Y T + L + ++D A++ L +M C P
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGF---------------------------- 95
+ +S ++ L K + L M GF
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Query: 96 -----NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
P ++ YN+++ L C + VD FR M G PD + YN + L ++
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITML-----LDAD-EPEFAIEIWNYILENGILP 204
++ + + +M+ P + +T I L +DAD + E A EI + + G P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Query: 205 LEASANVLLVGL 216
+ V++ GL
Sbjct: 351 NAGTYAVVIEGL 362
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 10/217 (4%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L+R Q +A++ R E C P + + + L K +L D M G +
Sbjct: 8 LVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG--IP 62
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P + ++N V+ LC + +F + PD +T+N++ + L+K+ +V E
Sbjct: 63 PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 159 FHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F M ++ P + T I L + + AIE+ + + E G P + +VL+ GL
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 218 NLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
GR +EM R +++Y+ + L K+
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 3/208 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y + L R ++ +AL LR M P L FS + L K +D +
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ +M PN + Y A++ L +VD R F+ MV P TYN + +
Sbjct: 409 IFGMMSE--RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDG 465
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E MI E P + I L E A E++ + G
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
NVL+ L RLSD A +++
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLI 553
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 9/194 (4%)
Query: 29 VLAYETFLITLIRGKQVDE------ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
V+ Y T + L + +VD A + L +MK C P ++ ++ L + S
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L M I ++P+L ++ V+G LC ++D+D ++ F M P+ + Y +
Sbjct: 371 ALALLRRM--IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAAL 428
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K +V + F M+++ ++P + + L E A+ + ++
Sbjct: 429 IDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKEC 487
Query: 203 LPLEASANVLLVGL 216
P AS L+ GL
Sbjct: 488 FPDGASYGALIRGL 501
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A K FG M ER E P V AY + L +G +VD+A++ +M E+ P + +++
Sbjct: 406 AYKIFGMMSER-ECKPNPV-AYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSV 462
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LD L + V++ + M I P+ Y A++ LC + V+ + F +
Sbjct: 463 LDGLCGVGRIEEAVRMVEGM--IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
G + YN++ L K K++ + +++I+ ++
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A + M + +++P+ V Y + +L ++D ALK L + +NC
Sbjct: 163 GFCKMNRIDDATRVLDRMRSK-DFSPDTV-TYNIMIGSLCSRGKLDLALKVLDQLLSDNC 220
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L D M+ G L P++ YN ++ +C VD
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRG--LKPDMFTYNTIIRGMCKEGMVDRA 278
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD ++YN++ L+ K E E +M + P + + IT
Sbjct: 279 FEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 338
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + E A+ + + E G+ P S + L+ GRL F E M++ L
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 5/248 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G + EA M E+ P+ +Y+ + R ++D A++FL M + C P
Sbjct: 341 RDGKIEEAMNLLKLMKEK-GLTPD-AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K + ++++ + +G + PN YN + L ++ D
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCS--PNSSSYNTMFSALWSSGDKIRALHM 456
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+MV +G PD +TYN + CL + V + +M E+ P+ + +
Sbjct: 457 ILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCK 516
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E AI++ + ++ NG P E + VL+ G+ G ++ A +++ R I + +
Sbjct: 517 AHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV-RINAISEYS 575
Query: 244 MQKLKKAF 251
++L + F
Sbjct: 576 FKRLHRTF 583
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 4/216 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V EA K EM+ R P+ + Y T + + + VD A + +R ++ + C P +
Sbjct: 237 EGGVDEALKLLDEMLSR-GLKPD-MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L L+ +L M + PN++ Y+ ++ LC + ++
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLL 352
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD+ +Y+ + + ++ F MI + P +N T + L
Sbjct: 353 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 412
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ + A+EI+ + E G P +S N + L + G
Sbjct: 413 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 21/254 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK--G 57
+ GN +E+ MV R +NP+ +L + LI+G + V +A++ + +++ G
Sbjct: 97 RSGNYIESLHLLETMV-RKGYNPDVILCTK-----LIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P + ++ ++ K+N ++ D M F+ P+ + YN ++G LC+ +
Sbjct: 151 Q---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS--PDTVTYNIMIGSLCSRGKL 205
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + DQ++ P +TY ++ E + V E EM+ +P T
Sbjct: 206 DLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTI 265
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR- 236
I + + A E+ + G P S N+LL L N G+ + + +M + +
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325
Query: 237 ---ILIYDVTMQKL 247
++ Y + + L
Sbjct: 326 DPNVVTYSILITTL 339
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 12/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G KE + +A+K F EMVER P+ + TF TLI G D +AL M
Sbjct: 337 GLCKEKMLTDADKLFDEMVERGAL-PD----FYTF-TTLIHGHCQDGNMTKALSLFGTMT 390
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + ++ +D K+ + +LWD M I + PN I Y ++ C+
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM--ISRKIFPNHITYGILINAYCSVGH 448
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FR +D M+ G P +T N + + ++ + + F MI P ++ T
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + D + A N + + G+LP + NV++ G GR+ + +M+ +
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 237 I 237
I
Sbjct: 569 I 569
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ N EA + FGEM+ R P+ ++++ + + R + +D+AL + R MK P
Sbjct: 235 RRDNFSEAKEIFGEML-RQGVVPD-LVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + + +++ D M+ G L ++I YN ++ LC + + +
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL--DVIAYNTILNGLCKEKMLTDADKL 350
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV GA PD T+ + ++ + + + F M + +P + T I
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 410
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E E A E+W+ ++ I P + +L+ ++G +S+ R + M+ + I VT
Sbjct: 411 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 470
Query: 244 MQKLKKAFYNESRSMR 259
+ K + S +
Sbjct: 471 CNTVIKGYCRSGDSSK 486
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN++EA K EM+E + V+AY T L L + K + +A K M
Sbjct: 302 GYCRNGNMLEALKIRDEMLE--QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + + + T + L+ M N+ P+++ YN ++ C +++
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ--RNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D M+ FP+ +TY ++ V E + MI+ +PT + C T I
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ + A E ++ G+ P S N L+ G
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLING 512
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 4/242 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++GN+ +A FG M +R P+ ++AY T + + ++++A + M
Sbjct: 372 GHCQDGNMTKALSLFGTMTQR-NIKPD-IVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + ++ + + +LWD+M+ G + P L+ N V+ C + D
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG--IKPTLVTCNTVIKGYCRSGDSSKA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G PD ++YN + ++ + + + ++M K P + +
Sbjct: 488 DEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG 547
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A + ++E GI P ++ L+ G L++ RF +EML R
Sbjct: 548 FCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Query: 241 DV 242
DV
Sbjct: 608 DV 609
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 6/224 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN--DSTHTVQLW 87
L ++ + T ++ +++ E + R+++ + ++ ++ L LVK++ + V
Sbjct: 49 LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ GI N+ IM NA LC + D+V F +M +G + D +TYN +
Sbjct: 109 VVRSGIELNVYTLNIMVNA----LCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ + E + M +P+ I L A I +L G+ P
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ N LLV S+ + EML + ++ V+ L F
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 88/216 (40%), Gaps = 6/216 (2%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + + D+ FL M+G + + ++ + + ++ + M G L
Sbjct: 127 ALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG--L 184
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P+L YNA++ LC +M+ G PD+ TYN + + E +
Sbjct: 185 KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 244
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM++ P ++ ++ I + + A+ + + + G++P VL+ G
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304
Query: 218 NLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKK 249
G + + + +EML + ++ Y+ + L K
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV A F EM R+ + V Y + L + ++DEA F M+ E+C P
Sbjct: 280 NVHGALSLFEEM--RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVV 337
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFD 125
+N ++ L K ++L++ M G+ + +PN++ YN ++ L + + V VF +F+
Sbjct: 338 MNNMINFLGKAGRLDDGLKLFEEM-GVS-HCIPNVVTYNTIIKALFESKSRVSEVFSWFE 395
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P TY+++ + K ++ + EM + + P P + I L A
Sbjct: 396 RMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEM----LNRRIL 238
+ A E++ + EN +SA V V +++L GRL D +EM +
Sbjct: 456 RYDLACELFQELKENC---GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 239 IYDVTMQKLKKA 250
Y+ M L +A
Sbjct: 513 AYNALMSGLARA 524
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 1/226 (0%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
K + +A+ +K C PT + +++ + +L+ +L++ M G + P+
Sbjct: 172 AKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG-HCHPDT 230
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ Y+A++ C D+ R ++M +G P + Y MI K VH + F E
Sbjct: 231 VTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEE 290
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M +P I L A + A ++ + P N ++ L GR
Sbjct: 291 MRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGR 350
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
L D + EEM + VT + KA + + + F ER
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFER 396
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A EM E+ P AY + + L + K+ D A + + +K ENC
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEK--GFPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENC 471
Query: 61 -FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + ++ + L K + L+D M +G PN+ YNA++ L +D
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT--PNVYAYNALMSGLARACMLDE 529
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M HG PD +YN+I L K H M + +P ++ T ++
Sbjct: 530 ALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLS 589
Query: 180 MLLDADEPEFAIEI 193
L A E A E+
Sbjct: 590 ALSHAGMFEEAAEL 603
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM + P +V AY + L R +DEAL +R M+ C P
Sbjct: 488 KAGRLDDAINLFDEM-SKLGCTP-NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPD 545
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K +++ M + P+ + YN V+ L + +
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLTNMKN--STIKPDAVSYNTVLSALSHAGMFEEAAEL 603
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 604 MKEMNALGFEYDLITYSSILEAIGK 628
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 5/218 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
K G + + K F EM +V+ Y T + L K +V E + MKG P
Sbjct: 347 KAGRLDDGLKLFEEM--GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K N + L + M GF P Y +++ L D
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCP--AAYCSLIDALGKAKRYDLACE 462
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F ++ + + Y ++ + L K ++ + N F EM K P ++ L
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA 522
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A + A+ + E+G LP S N++L GL G
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A + EM +R P V + + L + + +AL + + + G C
Sbjct: 39 GLCKAGKLDQAYELLDEMRDR--GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKC 96
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D LVK Q+++ M +PN++ Y V+ LC + +D
Sbjct: 97 TPDIITFNILVDALVKSGRVEEAFQIFESM-HTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M G P+ +TY+++ E L K + + EM + +QP + T +
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
L + + A+E+ ++ +G P + N L+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 9/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
G K G +A F + V + P+ ++ + + L++ +V+EA + M
Sbjct: 74 GLCKAGRFGDALGYF-KTVAGTKCTPD-IITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ ++ L K ++L D+M G PN+I Y+ +V LC D
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG--CCPNVITYSVLVEGLCKAGRTDK 189
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD + YN + L K++++ E MI++ PT + + +
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
+ + + + A + + E G P + N ++ GL RL D + ++M+ R
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 237 -ILIYDVTMQKLKK 249
++ Y + L K
Sbjct: 310 DVITYSTIIDGLCK 323
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK--LNDST-- 81
P V+ Y T + L R ++D+A L+ M C P + +S +D L K D+
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332
Query: 82 --HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ ++M G PN Y V+ LC +M+ PD ++
Sbjct: 333 LEAACEILEMMKQTGCP--PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
+M+ L K+ + F M + E +P P+ A I L E + A+ ++ ++E
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ P A+ N +L GL +GR+ + R E M+++
Sbjct: 451 S-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 40/252 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA + F M + P +V+ Y T + L + ++D A++ L +M C P
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPN 170
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGF---------------------------- 95
+ +S ++ L K + L M GF
Sbjct: 171 VITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Query: 96 -----NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
P ++ YN+++ L C + VD FR M G PD + YN + L ++
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITML-----LDAD-EPEFAIEIWNYILENGILP 204
++ + + +M+ P + +T I L +DAD + E A EI + + G P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Query: 205 LEASANVLLVGL 216
+ V++ GL
Sbjct: 351 NAGTYAVVIEGL 362
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 10/217 (4%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L+R Q +A++ R E C P + + + L K +L D M G +
Sbjct: 8 LVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG--IP 62
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P + ++N V+ LC + +F + PD +T+N++ + L+K+ +V E
Sbjct: 63 PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 159 FHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F M ++ P + T I L + + AIE+ + + E G P + +VL+ GL
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 218 NLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
GR +EM R +++Y+ + L K+
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 3/208 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y + L R ++ +AL LR M P L FS + L K +D +
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ +M PN + Y A++ L +VD R F+ MV P TYN + +
Sbjct: 409 IFGMMSE--RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDG 465
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E MI E P + I L E A E++ + G
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
NVL+ L RLSD A +++
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLI 553
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 9/194 (4%)
Query: 29 VLAYETFLITLIRGKQVDE------ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
V+ Y T + L + +VD A + L +MK C P ++ ++ L + S
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L M I ++P+L ++ V+G LC ++D+D ++ F M P+ + Y +
Sbjct: 371 ALALLRRM--IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAAL 428
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K +V + F M+++ ++P + + L E A+ + ++
Sbjct: 429 IDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKEC 487
Query: 203 LPLEASANVLLVGL 216
P AS L+ GL
Sbjct: 488 FPDGASYGALIRGL 501
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A K FG M ER E P V AY + L +G +VD+A++ +M E+ P + +++
Sbjct: 406 AYKIFGMMSER-ECKPNPV-AYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSV 462
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LD L + V++ + M I P+ Y A++ LC + V+ + F +
Sbjct: 463 LDGLCGVGRIEEAVRMVEGM--IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
G + YN++ L K K++ + +++I+ ++
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + K EMV ++ P + + Y T + +L++ + +A ++M +C
Sbjct: 315 GYCKQERPQDGAKLLQEMV-KYGCEP-NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ F+ +D+ K+ +L+ +M G +P++ YN ++ C N +D+
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG--CLPDIYTYNIMISGACRANRIDDA 430
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G PD +TYN I L K +V E + + + + C+T I
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
L + + A ++ + NG P + +L+ G +L F EML++
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550
Query: 237 ILIYDVTMQKLKKA 250
++ Y + + KL K+
Sbjct: 551 VITYSIVIDKLCKS 564
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 4/201 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + ++ F EM+++ V+ Y + L + +V + L+ M
Sbjct: 525 GFCKADQLDKSLAFFSEMLDK--GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 582
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D L K + +L+ +M G P ++ YN +V LC + +D
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG--CAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD++TYN +F+ K+ + + F M PTP + +T
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTK 700
Query: 181 LLDADEPEFAIEIWNYILENG 201
L+ ++ + A+EIW LE G
Sbjct: 701 LVAEEKMDQAMEIWEEALEAG 721
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 4/255 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + +A + M E P V+ Y + + L + QVDEA + V++
Sbjct: 420 GACRANRIDDARQLLERMTE--AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 477
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F + S +D L K +L M G P+++ Y ++ C + +D
Sbjct: 478 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGS--APDVVAYTILIHGFCKADQLDKS 535
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FF +M+ G P +TY+++ + L K+ +V + M++ P + + I
Sbjct: 536 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDG 595
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L +D + A E++ + + G P + NVL+ L + RL + E M + L
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655
Query: 241 DVTMQKLKKAFYNES 255
VT + F+ +
Sbjct: 656 TVTYNSVFDGFWKSA 670
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L + ++ +A L M C P + ++ ++ KL + V L++
Sbjct: 236 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + + P++ YN ++ C + + +MV +G P+ +TYN + + L+K
Sbjct: 296 QM--LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K + N M++ + +P+ I M + + A E++ + + G LP +
Sbjct: 354 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 413
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N+++ G R+ D R+ E M
Sbjct: 414 YNIMISGACRANRIDDARQLLERM 437
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 24/228 (10%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGK------QVDEALKFLRVMKGENCFPTLKFFSNALDI 73
E FE + + +L+ + G+ +D+A+KF G+ + KF N L
Sbjct: 81 EDFELASRRLCEFGGYLVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCL-- 138
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
L + +D+ L P+ I Y+ ++ C D +R D+M G
Sbjct: 139 LSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI 198
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI---TMLLDADEPEF 189
P + YN I + L N +V + +M + NCA ++ T+L+DA
Sbjct: 199 VPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR--------NCAPSVITYTILVDALCKSA 250
Query: 190 AIEIWNYILEN----GILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I + ILE+ G P + N L+ G LG + + +ML
Sbjct: 251 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 298
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 38/268 (14%)
Query: 6 GNVVEANKTFGEMVERFEW---NPEHV---LAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G V++ + V+ F+W P + L +R K+ EA + +
Sbjct: 103 GRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGL 162
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------ 95
C P +S ++ K D +L D M G
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
N P++I Y +V LC + + + + M+ G P+ +TYN +
Sbjct: 223 VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E F++M++N P I + P+ ++ +++ G P
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ L G+ D A+ ML R
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA EM + + + + + + ++ EA++ R M + C
Sbjct: 433 GFCKLGKIDEAYNVLNEMSA--DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F++ + L ++++ H + L M+ G ++ N + YN ++ ++
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG--VVANTVTYNTLINAFLRRGEIKEA 548
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++MVF G+ D +TYN + + L + +V + + F +M+++ P+ ++C I
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRR 236
L + E A+E ++ G P + N L+ GL GR+ D R+ E +
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 237 ILIYDVTMQKLKKAFY 252
+ ++ M L K +
Sbjct: 669 TVTFNTLMSWLCKGGF 684
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 44/273 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A +MV + P+ V Y + + + V AL+ L M+ + C
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPD-VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D KL + + M G L PN + +N ++ C + +
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG--LKPNTVGFNCLISAFCKEHRIPEA 478
Query: 121 FRFFDQMVFHGAFPD-----------------------------------SLTYNMIFEC 145
F +M G PD ++TYN +
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDADEPEFAIEIWNYILENGI 202
++ ++ E +EM+ +Q +PL+ T I L A E + A ++ +L +G
Sbjct: 539 FLRRGEIKEARKLVNEMV---FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
P S N+L+ GL G + + F +EM+ R
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 2/187 (1%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+C PT K ++ L+ILV N H V + + P L + V+ C N++D
Sbjct: 177 SCEPTFKSYNVVLEILVSGN--CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ M HG P+S+ Y + L K +V+E EM P I
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L D A ++ N +L G P + + L+ GL +GR+ + + I+
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Query: 239 IYDVTMQ 245
I++ +
Sbjct: 355 IFNTLIH 361
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 15/263 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE + EA + F EM R P+ V + + + L ++ AL LR M E
Sbjct: 471 KEHRIPEAVEIFREM-PRKGCKPD-VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ ++ + +L + MV G L + I YN+++ LC +VD
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDKARSL 586
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M+ G P +++ N++ L ++ V E F EM+ P + + I L
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML------NRR- 236
A E + ++ + GI P + N L+ L G + D +E + N R
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 237 --ILIYDVTMQKL--KKAFYNES 255
IL+ + Q+ ++ FYN +
Sbjct: 707 WSILLQSIIPQETLDRRRFYNAA 729
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 2/171 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+ Y +V C +D + ++M G P+++ +N + K ++ E
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EM + +P + I+ L + DE + A+ + ++ G++ + N L+
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF--YNESRSMRDRFDSLER 267
G + + R+ EM+ + + ++T L K E R F+ + R
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F +M+ R P + + + ++D AL LR M C P +
Sbjct: 201 AANVFYDMLSR--KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ L K N +QL + M +G +P+ +N V+ LC + ++ + ++M+
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMG--CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
G PD +TY + L K +V ++ F+ + K E
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 10/233 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V+ Y+T + +L + +V+EAL+ L M C P + F++ + L K + +
Sbjct: 250 PNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ + M+ GF P+ I Y ++ LC VD F + P+ + +N +
Sbjct: 309 MVNRMLIRGF--APDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHG 362
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCA--TAITMLLDADEPEFAIEIWNYILENGIL 203
+ + ++ + + +M+ + + P C + I A+E+ + + G
Sbjct: 363 FVTHGRLDDAKAVLSDMVTS-YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P S +L+ G LG++ + EM + V L AF E R
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 15/255 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGEN 59
G K + EA K M+ R + P+ + Y + L + +VD A F R+ K
Sbjct: 296 GLCKFDRINEAAKMVNRMLIR-GFAPDDI-TYGYLMNGLCKIGRVDAAKDLFYRIPK--- 350
Query: 60 CFPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P + F+ + V +L+D+ L D++ G ++P++ YN+++
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAV--LSDMVTSYG--IVPDVCTYNSLIYGYWKEGL 404
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V M G P+ +Y ++ + K K+ E N +EM + +P +
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I+ A+EI+ + G P + N L+ GL + + +M++
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 237 ILIYDVTMQKLKKAF 251
++ VT L AF
Sbjct: 525 VVANTVTYNTLINAF 539
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+ ++ F EM+ + +PE ++ Y T + + ++D+AL +R +KG P+ +S
Sbjct: 102 QGHQIFEEMLSKGH-SPE-LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYST 159
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + +L+++ G + ++I+Y + + LC +D +M+
Sbjct: 160 LIDGLCKHDRHEEARELFEMAAGD----VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIE 215
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD ++YN+I L K+ +V E + + ++ + P C + L + E
Sbjct: 216 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 275
Query: 190 AIEIWNYILENG-ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A I +LE G P + + ++ GL RL D ++M + VT +
Sbjct: 276 ACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAII 335
Query: 249 KAFYNESR--SMRDRFDSLERRWKTSQM 274
AF R R+ F + R S +
Sbjct: 336 DAFCKVGRLDEARELFQRMHERGCASDV 363
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
MK PT+ F + + L +LN + +Q++ M I + P+ +Y V+G LC
Sbjct: 5 MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQM--IDMKVKPDAFLYTVVIGHLCKI 62
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
N +D +F+QMV G PD +TY ++ L K K + F EM+ P +
Sbjct: 63 NKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 122
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
AT + A + A+ + + G P + + L+ GL R + R E
Sbjct: 123 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAG 182
Query: 235 --RRILIYDVTMQKLKKA 250
+ +++Y + L KA
Sbjct: 183 DVQDVIVYTSFISGLCKA 200
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 88/222 (39%), Gaps = 3/222 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E+ E + + V+ Y +F+ L + ++DEA M C P ++ + L K
Sbjct: 175 ELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 234
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG-AFPD 135
N + +L D + MP + + +V LC + V+ ++M+ G P
Sbjct: 235 DNRVSEAKELMD--QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TY+ + + L K ++ + +M + P + I + A E++
Sbjct: 293 VVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ E G + N+L+ G ++ + EEM R I
Sbjct: 353 RMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGENCFP 62
K+ V EA + + +ER + P V + L + ++V+EA L R+++ + P
Sbjct: 234 KDNRVSEAKELMDQAMER-KCMP-GVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP 291
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +S +D L K + + M G +P+++ Y A++ C +D
Sbjct: 292 SVVTYSAVIDGLCKADRLDDAYIVLQKMRRAG--CVPDVVTYTAIIDAFCKVGRLDEARE 349
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
F +M G D + YN++ + KV E EM
Sbjct: 350 LFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 10/262 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + F EM E +P V+ Y + + L + K +D A++ L M +
Sbjct: 200 GLCRLGKIGEAKELFKEM-ETKACSPT-VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGI 257
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D K S+ ++L D+MV +PN+I Y+ +V LC +
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVS--RRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G PD+ Y I K HE NF EM+ P L + + +
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 181 L------LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + P A +++ + GI + + L+ N G L +EM+
Sbjct: 376 HNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVL 435
Query: 235 RRILIYDVTMQKLKKAFYNESR 256
+ +VT + AF++ +
Sbjct: 436 DGCIPDEVTWNAVVCAFWDRRK 457
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A++ R MK C P+ K + ILV N ++ + M +G + P++ N
Sbjct: 103 DAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMG--IPPSVASLNV 160
Query: 107 VVGLLC-NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ LC N+ +D R F +M G PDS TY + L + K+ E + F EM
Sbjct: 161 LIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK 220
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
PT + + I L + + + AI + + GI P + + L+ G G S
Sbjct: 221 ACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRA 280
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ M++RR L +T L E +
Sbjct: 281 LELLDMMVSRRHLPNMITYSTLVHGLCKEGK 311
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++++V CN D+ D+MV G PD +T+N + +KV E
Sbjct: 410 FDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRE 460
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV A F EM R+ + V Y + L + ++DEA F M+ E C P
Sbjct: 280 NVHGALSLFEEM--RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVV 337
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFD 125
+N ++ L K ++L++ M G+ + +PN++ YN ++ L + + V VF +F+
Sbjct: 338 MNNMINFLGKAGRLDDGLKLFEEM-GVS-HCIPNVVTYNTIIKALFESKSRVSEVFSWFE 395
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P TY+++ + K ++ + EM + + P P + I L A
Sbjct: 396 RMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEM----LNRRIL 238
+ A E++ + EN +SA V V +++L GRL D +EM +
Sbjct: 456 RYDLACELFQELKENC---GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 239 IYDVTMQKLKKA 250
Y+ M L +A
Sbjct: 513 AYNALMSGLARA 524
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 1/226 (0%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
K + +A+ +K C PT + +++ + +L+ +L++ M G + P+
Sbjct: 172 AKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG-HCQPDT 230
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ Y+A++ C D+ R ++M +G P + Y MI K VH + F E
Sbjct: 231 VTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEE 290
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M +P I L A + A ++ + G P N ++ L GR
Sbjct: 291 MRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGR 350
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
L D + EEM + VT + KA + + + F ER
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFER 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A EM E+ P AY + + L + K+ D A + + +K ENC
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEK--GFPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENC 471
Query: 61 -FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + ++ + L K + L+D M +G PN+ YNA++ L +D
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT--PNVYAYNALMSGLARACMLDE 529
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M HG PD +YN+I L K H M + +P ++ T ++
Sbjct: 530 ALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLS 589
Query: 180 MLLDADEPEFAIEI 193
L A E A E+
Sbjct: 590 ALSHAGMFEEAAEL 603
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM + P +V AY + L R +DEAL +R M+ C P
Sbjct: 488 KAGRLDDAINLFDEM-SKLGCTP-NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPD 545
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K +++ M + P+ + YN V+ L + +
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLTNMKN--STIKPDAVSYNTVLSALSHAGMFEEAAEL 603
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 604 MKEMNALGFEYDLITYSSILEAIGK 628
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 5/218 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
K G + + K F EM +V+ Y T + L K +V E + MKG P
Sbjct: 347 KAGRLDDGLKLFEEM--GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K N + L + M GF P Y +++ L D
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCP--AAYCSLIDALGKAKRYDLACE 462
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F ++ + + Y ++ + L K ++ + N F EM K P ++ L
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA 522
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A + A+ + E+G LP S N++L GL G
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG+V +A T+ EM++R +P+ V Y + + L + + +D A++ L VM NC
Sbjct: 20 GLFKEGDVDKAYITYHEMLDR-RVSPDAV-TYNSIIAALSKAQAMDRAMEVLTVMVMPNC 77
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F +++ + S + ++ M G P+++ YN+++ LC N
Sbjct: 78 FT----YNSIMHGYCSSGQSEKAIGIFRKMCSDGIE--PDVVTYNSLMDYLCKNGKCTEA 131
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD MV G PD TY + + E+ + M++N Q I
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ + + +++ + + G+ P + ++ GL LGRL D E+M+++
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K+ V E F +M R + + + Y T + L + ++D+A+ M +
Sbjct: 191 AYTKQEKVDEVVLVFSKM--RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L + +L ++ G N PN++ +N ++ LC V
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN--PNIVFFNTILDSLCKEGRVIES 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD + G PD +TY+ + + K+ M+ +P + +T I
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR----RFAEEMLNRR 236
+ E A+ ++ + NG+ P + N++L GL R + + R E
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426
Query: 237 ILIYDVTMQKLKKA 250
+ Y++ + K
Sbjct: 427 LSTYNIILMDFAKT 440
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 16/255 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA + F EMV+R + +V++Y T + L + A+ + M+ C
Sbjct: 172 GLCNEGKIKEAVELFNEMVKR--GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGC 229
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K ++ MV G + PN+ YN++V CN ++
Sbjct: 230 KPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG--IPPNVFTYNSIVHGFCNLGQLNEA 287
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F +MV P+++T+ ++ + L K V E F M + +P +
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPD----ISTYNA 343
Query: 181 LLDADEPEF----AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
L+D + A +++ ++ G P S N+L+ G R+ + + EM
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 233 LNRRILIYDVTMQKL 247
LN + Y MQ L
Sbjct: 404 LNPDTVTYSTLMQGL 418
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 9/254 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A +F MV R P V+ + FL + + KQ + M +
Sbjct: 74 VDDALASFYRMV-RINPRPS-VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSL 131
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ ++ L +LN +V + M +G + P+ I +NA++ LCN + F++M
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIH--PDAITFNALINGLCNEGKIKEAVELFNEM 189
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
V G P+ ++Y + L K + F +M +N +P + +T I L
Sbjct: 190 VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLV 249
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
A+E + ++E GI P + N ++ G NLG+L++ R +EM+ R ++ VT L
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 248 -----KKAFYNESR 256
K+ +E+R
Sbjct: 310 VDGLCKEGMVSEAR 323
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A + EMVER P +V Y + + Q++EA + + M G + P F
Sbjct: 249 VNDAMEFLSEMVER--GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D L K + +++ M G P++ YNA++ C ++ + F+ M
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVE--PDISTYNALMDGYCLQRLMNEAKKVFEIM 364
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P + +YN++ K++++ E ++ EM P + +T + L P
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+ ++ + G P + +LL G G L + + + M +++
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 4/238 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F M+ + H +Y + + +++DEA L M + P +S
Sbjct: 356 EAKKVFEIMIRKGCAPGAH--SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L +L + L+ M G + PNL+ Y ++ C + +D + M
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPH--PNLVTYVILLDGFCKHGHLDEALKLLKSMKE 471
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ + Y ++ E + K+ + F ++ + +P I LL +
Sbjct: 472 KKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDE 531
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
A +++ + ++G LP S NV++ G S R +EM+ +R + T Q L
Sbjct: 532 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQML 589
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 100/245 (40%), Gaps = 16/245 (6%)
Query: 7 NVVEANKTFGEMVERFEWNP--------------EHVLAYETFLITLIRGKQVDEALKFL 52
+VVE K G ++ +++ +V + + L R VD ++ L
Sbjct: 92 SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151
Query: 53 RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
M P F+ ++ L V+L++ MV G PN+I Y V+ LC
Sbjct: 152 GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE--PNVISYTTVINGLC 209
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+ F +M +G P+ +TY+ I + L K++ V++ F EM++ P
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + + + A ++ ++ ++P + +L+ GL G +S+ R E M
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329
Query: 233 LNRRI 237
+ +
Sbjct: 330 TEKGV 334
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + EA K EMVE P+ V+ + + TL + +VDEA K MK
Sbjct: 515 YSKVGEIDEAIKLLSEMVENC-CEPD-VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 572
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K ++L++ MV G PN I +N + LC N++V
Sbjct: 573 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG--CPPNTITFNTLFDCLCKNDEVTLAL 630
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ +M+ G PD TYN I L+KN +V E FFH+M K
Sbjct: 631 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 673
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K GN EA F ++ V R + ++ Y T + L+R ++D+AL+ M+ P
Sbjct: 377 KAGNFGEA---FAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKP 433
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T + +D K DS ++ ++ M G + PN++ NA + L +
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKG--IAPNIVACNASLYSLAKAGRDREAKQ 491
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F + G PDS+TYNM+ +C K ++ E EM++N +P + + I L
Sbjct: 492 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLY 551
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
AD + A +++ + E + P + N LL GL G++ + E M+ +
Sbjct: 552 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 604
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGEN 59
+ K G + E + + EM E P + + + + L++ VD+AL + +M +
Sbjct: 831 AYGKSGKIDELFEIYKEM-SAHECEP-NTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 888
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT + +D L K QL++ M G PN +YN ++ + D
Sbjct: 889 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR--PNCAIYNILINGFGKAGEADA 946
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +MV G PD TY+++ +CL +V E ++F E+ ++ P + I
Sbjct: 947 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIIN 1006
Query: 180 MLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L E A+ ++N + ++ GI P + N L++ L G + + + E+
Sbjct: 1007 GLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1060
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ P L YN ++G L + ++ F Q+ G PD TYN + + K+ K+ E
Sbjct: 781 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI-WNYILENGILPLEASANVLL 213
+ + EM +E +P + I+ L+ A + A+++ ++ + + P + L+
Sbjct: 841 LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900
Query: 214 VGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
GL GRL + ++ E M IY++ + KA
Sbjct: 901 DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKA 941
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 2/202 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + ++ L + + ++ + L+ M+ P + F+ + +L + ++ M
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G P+++ Y ++ LC +D F +M PD +TY + + N+
Sbjct: 287 DDEGCG--PDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNR 344
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ V F+ EM K+ P + + L A A + + + GILP + N
Sbjct: 345 DLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYN 404
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
L+ GL + RL D + M
Sbjct: 405 TLICGLLRVHRLDDALEIFDNM 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + F +M + P+ V Y T L + +D +F M+ + P + F+
Sbjct: 314 AKEVFAKM-KTGRHKPDRV-TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTIL 371
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+D L K + D+M G ++PNL YN ++ L + +D+ FD M
Sbjct: 372 VDALCKAGNFGEAFAKLDVMRDQG--ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL 429
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P + TY + + K+ F +M P + C ++ L A A
Sbjct: 430 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 489
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+I+ + + G++P + N+++ +G + + + EM+
Sbjct: 490 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMV 532
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L++ + EA++ R M + P+L+ +S+ + L K D + L M
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM 251
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ + + +L ++ + +M G PD +TY ++ + L +
Sbjct: 252 ETLG--LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 309
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ + F +M +P + T + D + + + W+ + ++G +P +
Sbjct: 310 KLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFT 369
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ L G + + M ++ IL
Sbjct: 370 ILVDALCKAGNFGEAFAKLDVMRDQGIL 397
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 5/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F E + + P + Y + + + D A + M E
Sbjct: 902 GLSKSGRLYEAKQLF-EGMSDYGCRPNCAI-YNILINGFGKAGEADAACALFKRMVKEGV 959
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LK +S +D L + + + + G N P+++ YN ++ L + ++
Sbjct: 960 RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN--PDVVCYNLIINGLGKFHRLEEA 1017
Query: 121 FRFFDQMV-FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F++M G PD TYN + L V E ++E+ + +P I
Sbjct: 1018 LVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
+ +PE A ++ ++ G P
Sbjct: 1078 GYSLSGKPEHAYAVYQTMVTGGFSP 1102
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 31 AYETFLITLIRGKQVDE--ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
AY + GK D AL+ MK + P + + +L L K Q++
Sbjct: 435 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ IG L+P+ + YN ++ ++D + +MV + PD + N + L K
Sbjct: 495 GLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V E F M + + +PT + T + L + + AIE++ +++ G P +
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612
Query: 209 ANVL 212
N L
Sbjct: 613 FNTL 616
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 4/218 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA + M + E V+ Y + L +++D A + MK P
Sbjct: 272 RAGKINEAYEILKRMDD--EGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ LD D Q W M G +P+++ + +V LC + F
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH--VPDVVTFTILVDALCKAGNFGEAFAK 387
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D M G P+ TYN + L++ ++ + F M +PT I
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGK 447
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
+ + A+E + + GI P + N L L GR
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 3/215 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW- 87
V Y L + ++DE + + M C P + + LVK + + L+
Sbjct: 822 VATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYY 881
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D+M F+ P Y ++ L + + + F+ M +G P+ YN++
Sbjct: 882 DLMSDRDFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + F M+K +P + + L + + + + E+G+ P
Sbjct: 940 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVV 999
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
N+++ GL RL + EM R + D+
Sbjct: 1000 CYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDL 1034
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA---LKFLRVMKG 57
GW + N K EM++ P+ Y T + R V+EA +F+R
Sbjct: 181 GWCRVRNPTRGMKVLEEMIQ-LGHTPDS-FTYITAIDAFCRAGMVNEAAELFEFMRTKGS 238
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K ++ + LV+ N +L + M+ G +P++ + ++ +C+ +
Sbjct: 239 TMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSG--CLPDVSTFKELIEGMCSAGKI 296
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D +RF +M G PD +TYN + L +NK E + MI+ P+
Sbjct: 297 DEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNML 356
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+M + +P+ A E W + + G + V++ GL ++ D E+++N+ +
Sbjct: 357 ISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGM 416
Query: 238 LI----YDVTMQKLK-----KAFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D + +L +A + S MR + S+ RR+ +Q
Sbjct: 417 KLPYQKFDSFLMQLSVIGNIRAIHRLSEHMRTFHNPSMARRYVLNQ 462
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN + C + + ++M+ G PDS TY + + V+E
Sbjct: 170 PDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAEL 229
Query: 159 FHEMIKNEW----QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F E ++ + PT A I L+ + + ++ ++ +G LP ++ L+
Sbjct: 230 F-EFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIE 288
Query: 215 GLRNLGRLSDVRRFAEEMLNR 235
G+ + G++ + RF +EM N+
Sbjct: 289 GMCSAGKIDEAYRFLQEMGNK 309
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 17/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G ++EA EM+ + NP ++ Y T + TL + +V E+ L VM +
Sbjct: 194 GFCLAGQLMEAFGLLNEMILK-NINP-NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D + + Q++ +MV G N P++ YN ++ LC VD
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN--PDVYSYNIIINGLCKGKRVDEA 309
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ PD++TY+ + + L K ++ + + EM + QP L
Sbjct: 310 MNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM-HHRGQPANL---VTYNS 365
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
LLD + AI ++ + E GI P + + L+ GL GRL + + +L +
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 237 ILI----YDVTMQKL-KKAFYNESRSMRDRFD 263
I Y V + L K+ ++E+ +M+ + +
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V +A + F MV+ NP+ V +Y + L +GK+VDEA+ LR M +N
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQT-GVNPD-VYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D L KL T + L M G NL+ YN+++ LC N ++D
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP--ANLVTYNSLLDGLCKNQNLDKA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ TY + + L K ++ + + F ++ + I+
Sbjct: 380 IALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+ + + + +NG +P + +++ L + EM+ + +L +
Sbjct: 440 LCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPF 499
Query: 241 DVTMQKLKKAFYNESRSMRDR 261
+ F++E S+ ++
Sbjct: 500 --------RNFHSERSSVTNK 512
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+E P+ V+ Y T + L + K VDEA M FP + ++ +
Sbjct: 141 IEDRSTRPD-VVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
L + M I N+ PN+ YN ++ LC V M G PD +
Sbjct: 200 QLMEAFGLLNEM--ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257
Query: 139 YNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
Y+++ + CL+ +V + + F M++ P + I L + A+ +
Sbjct: 258 YSILMDGYCLV--GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+L ++P + + L+ GL LGR++ + +EM +R
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 43/188 (22%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL--------------------- 137
P+++MY+ ++ LC + VD + + +M G FPD +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 138 --------------TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
TYN + + L K KV E +N M K +P ++L+D
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD----VVIYSILMD 263
Query: 184 A----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
E + A +I+ +++ G+ P S N+++ GL R+ + EML++ ++
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP 323
Query: 240 YDVTMQKL 247
VT L
Sbjct: 324 DTVTYSSL 331
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 7/235 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + L +L++ K + + M+ + P L S ++ L + +
Sbjct: 10 IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ +G+ PN I+ N ++ LC +V F D++V G D ++Y ++ L K
Sbjct: 70 KILKLGYQ--PNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + +P + +T I L + A ++++ + GI P +
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSM 258
L+ G G+L + EM +N I Y+ + L K+ ES+++
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN A K F EM R E P+ + A+ + L +V EA K M +
Sbjct: 224 GFCKLGNTQAAYKLFSEMEAR-EIVPDSI-AFSALICGLSGSGKVVEADKLFNEMIKKGF 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D KL + L + MV IG L PN++ Y A+ LC + ++D
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG--LTPNVVTYTALADGLCKSGELDTA 339
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G + TYN I L K + + EM + P + T +
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A E+ +L+ G+ P + NVL+ GL G+L D R + ML + I+
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459
Query: 241 DVTMQKLKKAF 251
T + K +
Sbjct: 460 AATYNSIMKQY 470
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 101/266 (37%), Gaps = 44/266 (16%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
WN E +Y + +L R ++ EA L M+ + C P + ++ +D + +
Sbjct: 108 WNTE---SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
VQL M G L PNL Y++++ LLC + V + +M+ G FPD + Y +
Sbjct: 165 VQLVKEMQLKG--LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222
Query: 144 ECLIK-----------------------------------NKKVHEVENFFHEMIKNEWQ 168
+ K + KV E + F+EMIK ++
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE 282
Query: 169 PTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
P + I E + A + N +++ G+ P + L GL G L
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342
Query: 229 AEEM----LNRRILIYDVTMQKLKKA 250
EM L I Y+ + L KA
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKA 368
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + ++ L + +V E K LR M FP ++ +D KL ++ +L+ M
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
++P+ I ++A++ L + V + F++M+ G PD +TY + + K
Sbjct: 242 EA--REIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG 299
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + ++M++ P + L + E + A E+ + + G+ ++ N
Sbjct: 300 EMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYN 359
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
++ GL G + + EEM + +T L A+Y ++ R
Sbjct: 360 TIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P+++ Y ++ C+ ++ V + +M G P+ TY+ I L K+ KV E E
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEK 201
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EM+K P + T I + A ++++ + I+P + + L+ GL
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLS 261
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVT----------MQKLKKAFY 252
G++ + + EM+ + +VT + ++KKAF+
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFF 306
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 112/304 (36%), Gaps = 41/304 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G VVEA+K F EM+++ + P+ V Y + + ++ +A M
Sbjct: 259 GLSGSGKVVEADKLFNEMIKK-GFEPDEV-TYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ D L K + +L M G L N+ YN +V LC ++
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL--NISTYNTIVNGLCKAGNILQA 374
Query: 121 FRFFDQMVFHGAFPDS-----------------------------------LTYNMIFEC 145
+ ++M G PD+ +T+N++
Sbjct: 375 VKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNG 434
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + K+ + E M++ P + + + + EI+ + G++P
Sbjct: 435 LCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD 494
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR--FD 263
+ N+L+ G + + +EM+ +R + + L K F+ + + R F+
Sbjct: 495 SNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFE 554
Query: 264 SLER 267
+ R
Sbjct: 555 EMRR 558
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 25/244 (10%)
Query: 9 VEANKTFGEMVERF-----EWNPE-HVLAYETFLITLIRGKQVDEALKFLR-------VM 55
++ + +F VER +W + HV ++ F L+ ++EA KF +
Sbjct: 15 LDISNSFTHFVERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVAL 72
Query: 56 KGENCFPTLKFFSNALDIL-VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
+C L S+ D+L + L + QL G+ +N I+ N++ L
Sbjct: 73 SAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQL-----GVCWNTESYNILMNSLFRL---- 123
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ +M F G PD ++Y I + ++ +V EM +P
Sbjct: 124 GKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTY 183
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ I +L + + ++ +++ G+ P L+ G LG + EM
Sbjct: 184 SSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEA 243
Query: 235 RRIL 238
R I+
Sbjct: 244 REIV 247
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 2/215 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V ++ + R +V+EA+KF + M+ P + FS + + H
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G+G L+P+ ++Y V+G C + R D+MV G PD +TYN + L K
Sbjct: 322 EMKGLG--LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + E +EM + P T I E A+++++ +L + P +
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
N L+ G+ G L+ ++M R I VT
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 105/232 (45%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ +++A + EM ER P+ + + T + R ++AL+ + +
Sbjct: 376 GLCKQHRLLDAEELLNEMKER-GVTPD-LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D + + D +LWD M + PN + Y+ ++ C V+
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHA--REIFPNHVTYSILIDSHCEKGQVEEA 491
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+MV G P+ +TYN I + ++ V + + F +M+++ P + T I
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A ++N + + + P + N+++ G G + + R ++M
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++GN +A + F ++ + P+ V+AY + + + R + +A + M
Sbjct: 411 GYCRDGNFEKALQLFDTLLHQ-RLRPD-VVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP +S +D + D MV G NL PN++ YN+++ C + +V
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG-NL-PNIMTYNSIIKGYCRSGNVKKG 526
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F +M+ PD +T+N + IK + +H N F+ M K QP + I
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ E A ++ + +GI P + L+ G G + + +EM++R
Sbjct: 587 FSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHR 641
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 114/289 (39%), Gaps = 39/289 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V EA K + EM +R P+ V+++ + ++D A +LR MKG
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQR-GVTPD-VVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN------- 113
P ++ + + + +++ D MVG+G +P+++ YN ++ LC
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG--CLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 114 ----------------------------NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ + + + FD ++ PD + YN + +
Sbjct: 387 EELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG 446
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + + + + +M E P + + I + + E A + ++ G LP
Sbjct: 447 MCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN 506
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+ N ++ G G + ++F ++M+ IL +T L + E
Sbjct: 507 IMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKE 555
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN+ + +M R E P HV Y + + QV+EA FL M +
Sbjct: 446 GMCRKGDLAKANELWDDMHAR-EIFPNHV-TYSILIDSHCEKGQVEEAFGFLDEMVSKGN 503
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + + Q M + N++P+LI +N ++ ++
Sbjct: 504 LPNIMTYNSIIKGYCRSGNVKKGQQFLQKM--MQDNILPDLITFNTLIHGYIKEENMHGA 561
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F+ M PD++TYNMI + + E F +M + +P + I
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ A + A ++ + ++ G P
Sbjct: 622 HVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 8/225 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A+ EM +R + P+ V+ + + R VD A+ + M + P + F++
Sbjct: 175 KADTVISEMEKRCVF-PD-VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L K +++ M ++ P++ +N ++G C +V+ +F+ +M
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQC--SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQ 290
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD ++++ + K+ + EM P + I A
Sbjct: 291 RGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A+ + + ++ G LP + N LL GL RL D AEE+LN
Sbjct: 351 ALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD----AEELLN 391
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 55/138 (39%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N N +V C + + D +M FPD +T+N++ + + V
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M +P + + + L + A E++ + + + P S N+L+ G +
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275
Query: 220 GRLSDVRRFAEEMLNRRI 237
G + + +F +EM R +
Sbjct: 276 GEVEEAMKFYKEMQQRGV 293
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EK+G V +A + Y T + L + +A + LR M
Sbjct: 745 GMEKKGIVADA------------------VTYNTLISGLCNSGRWTDAARLLRDMVKRKI 786
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FF+ +D VK + L+ M I ++ PN++ YN+++ C + +
Sbjct: 787 DPNVIFFTALIDTFVKEGNLLEAKNLYKEM--IRRSVHPNILTYNSLINGFCIQGRLGDA 844
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD MV G FPD +TYN + K+K+V + F EM T I
Sbjct: 845 KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
A + A +++N +++ G+ P + N+LL L N G++ E++ ++
Sbjct: 905 YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964
Query: 237 ILIYDVTMQKLKK 249
I+ Y++ +Q + +
Sbjct: 965 IITYNIIIQGMCR 977
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+V A + EM ++ + ++ Y T L L + +A + LR M P
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAAD-LVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPD 240
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D VK + +L+ M + ++ PN + YN+++ LC + + + +
Sbjct: 241 VFTFTALIDAFVKQGNLDEAQELYKQM--LQSSIGPNTVTYNSLINGLCMHGRLYHAKKT 298
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD M G FP+ +TYN + K+++V + F M + T I
Sbjct: 299 FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQ 358
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV------RRFAEEMLNRRI 237
+ A +I+++++ G+ P + +LL GL G + R E+ L I
Sbjct: 359 VGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLG--I 416
Query: 238 LIYDVTMQKLKKA 250
+ Y++ + L KA
Sbjct: 417 VAYNIMIHGLCKA 429
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 3/231 (1%)
Query: 27 EHVLAYETFLI-TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
H L T LI R + AL L M P++ + L+ + N V
Sbjct: 647 SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M +G L PN+++YN V+ LC N D++N F M G D++TYN +
Sbjct: 707 LVDSMAELG--LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + + + +M+K + P + I + A ++ ++ + P
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ G GRL D + + M+++ VT L F R
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN++EA + EM+ R +P ++L Y + + ++ +A +M + CFP
Sbjct: 802 KEGNLLEAKNLYKEMIRR-SVHP-NILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPD 859
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ + YN ++ C ++ +
Sbjct: 860 VVTYNTLITGFCKSKRVEDGMKLFCEMTHQG--LVGDAFTYNTLIHGYCQAGKLNVAQKV 917
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G PD +TYN++ +CL N K+ + ++ KN+ + I +
Sbjct: 918 FNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCR 977
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLV-GLRNLGRLSDVRRFAEEMLNRRILIYDV 242
D+ + A ++ + G+ L+A A + ++ GL G +RR A+++ R + D
Sbjct: 978 NDKVKEAWCLFRSLTRKGV-KLDAIAYITMISGLCRNG----LRREADKLCTR--MKEDG 1030
Query: 243 TMQKLKKAFYNESRSMRDRFDSLE 266
M + Y+E ++RD + SL
Sbjct: 1031 FMP--SERIYDE--TLRDHYTSLS 1050
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 93/248 (37%), Gaps = 52/248 (20%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+CF S AL IL K M+ +G++ P+++ + +++ C N +
Sbjct: 108 HCFCRCSRLSLALSILGK-------------MMKLGYD--PSIVTFGSLLHGFCLRNRIH 152
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK-------------- 164
+ F MV G P+ + YN + +CL KN V+ +EM K
Sbjct: 153 DAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTL 212
Query: 165 -------NEWQ---------------PTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
EW+ P I + + A E++ +L++ I
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI 272
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ GL GRL ++ + M ++ VT L F +SR + D
Sbjct: 273 GPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFC-KSRRVEDGM 331
Query: 263 DSLERRWK 270
+R ++
Sbjct: 332 KLFQRMYR 339
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 2/194 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+ D+A M P++ F+ L + K+N + L+ M +G + +L
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGIS--HDLYS 652
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+ ++ C + +M+ G P +T + + + E + M
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ +P + T I L + A+EI+ + + GI+ + N L+ GL N GR +
Sbjct: 713 ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772
Query: 224 DVRRFAEEMLNRRI 237
D R +M+ R+I
Sbjct: 773 DAARLLRDMVKRKI 786
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 1/162 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F + +L + ++ C + + +M+ G P +T+ + ++H+
Sbjct: 94 FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHD 153
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE-ASANVLL 213
+ M+K+ ++P + T I L + A+E+ N + + G L + + N LL
Sbjct: 154 AFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
GL G R +M RRI T L AF +
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 4/203 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + A KTF M + + +V+ Y T + + ++V++ +K + M E
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCF--PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ + ++ ++ MV G + P++I + ++ LC N ++ +
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG--VTPDIITHCILLHGLCVNGEIGSA 400
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M + + YN++ L K KV E F + +P I
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460
Query: 181 LLDADEPEFAIEIWNYILENGIL 203
L A E++ + E+GI+
Sbjct: 461 LCKNGPRREADELFRRMKEDGII 483
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G+ EG V +A +M NP+ V T+ + LIRG+ +D A + LR+M+
Sbjct: 368 GFCNEGKVHKAMTLLNKM-RACGVNPDAV----TYNL-LIRGQCIDGHIESAFRLLRLME 421
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
G+ ++ ++ L K + L+D + G PN + +N+++ LC +
Sbjct: 422 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK--PNAVTFNSLINGLCKSGK 479
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
D ++F ++MV G PD+ TY+ E L K K E +F EM++ + +P+ +N
Sbjct: 480 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 539
Query: 177 AITMLLDADEPEFAIEIWNYILENGILP 204
I LL W ++ +G P
Sbjct: 540 VIHKLLKERNYGLVARTWGEMVSSGCNP 567
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G +A F + R P V + + + L + + D A KFL M C P
Sbjct: 441 KDGRTDQACSLFDSLETR-GIKPNAV-TFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S+ ++ L K+ S + M + ++ P+ + Y V+ L + V R
Sbjct: 499 TYTYSSFIEHLCKMKGSQEGLSFIGEM--LQKDVKPSTVNYTIVIHKLLKERNYGLVART 556
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+ +MV G PD +TY +++E EN EM KN
Sbjct: 557 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 598
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 8/257 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + FGEM + P+ + Y + L ++ +E L LR MK
Sbjct: 232 GLCEAGRIDEAVELFGEMDQ-----PDMHM-YAALVKGLCNAERGEEGLLMLRRMKELGW 285
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ + ++ +D + + ++ M G L P ++ AV+ C + +
Sbjct: 286 RPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG--LAPCVVTCTAVINAYCKEGRMSDA 343
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R + M G P+ TYN + + KVH+ ++M P + I
Sbjct: 344 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A + + +G++ + + N L+ L GR + + R I
Sbjct: 404 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 463
Query: 241 DVTMQKLKKAFYNESRS 257
VT L ++
Sbjct: 464 AVTFNSLINGLCKSGKA 480
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 8/250 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E EA + EM E+ V+ + + ++ +AL+ L +MK C P
Sbjct: 301 RERKAKEAEEMLQEMFEK--GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 358
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + + L + M G N P+ + YN ++ C + +++ FR
Sbjct: 359 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN--PDAVTYNLLIRGQCIDGHIESAFRL 416
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M G D TYN + L K+ + + + F + +P + + I L
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LI 239
+ + + A + ++ G P + + + L + + F EML + + +
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536
Query: 240 YDVTMQKLKK 249
Y + + KL K
Sbjct: 537 YTIVIHKLLK 546
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P YNAV+ LC D+ R+ MV G PD+ T+N + + +V +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
F +M + ++ AT I L +A + A+E++
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFG 247
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 3/259 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-NCFP 62
K + EA + M +Y + L +L + K+V +A M E + P
Sbjct: 96 KADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVP 155
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K+++ +L+ M I N +PN+ YNA + L + +
Sbjct: 156 DVVSYSILIDGFCKIDELGRAEKLYKQM--IDLNCVPNVTTYNAFLNGLMRKGRIADAQG 213
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+++M+ G PD +TY+ + +K + F MI +P + + L
Sbjct: 214 VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLC 273
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+P+ A E++ ++E G P + + LL G N+G++ +EM+++ V
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333
Query: 243 TMQKLKKAFYNESRSMRDR 261
L K F+ + R
Sbjct: 334 AYNCLLKGFFRAGKPGEAR 352
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 8/234 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A K + +M++ P +V Y FL L+R ++ +A M C
Sbjct: 166 GFCKIDELGRAEKLYKQMID-LNCVP-NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGC 223
Query: 61 FPTLKFFSNALD--ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + +S + L + +D H +L++ M+ G PN + YN ++ LC + D
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAH--ELFEAMISRGCR--PNAVTYNCLLHGLCKESKPD 279
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +MV G PD +TY + K+ + F EM+ P + +
Sbjct: 280 EAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 339
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A +P A +++ ++ P S N+++ GL RL D E M
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 15/257 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVM------K 56
K G V A M++R + P+ +A + LI L + ++ EA +FL+ M +
Sbjct: 61 KAGRVDSALSLLETMIKR-GYCPD--MATHSMLINELCKADKIQEAQEFLQGMNRTISTR 117
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+CF +++ L+ L K ++ MV +++P+++ Y+ ++ C ++
Sbjct: 118 ASSCFS----YNSLLNSLCKAKKVHQAFAIFSTMVS-ERSVVPDVVSYSILIDGFCKIDE 172
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ + + QM+ P+ TYN L++ ++ + + + EMI P + +T
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I A + + A E++ ++ G P + N LL GL + + +M+ R
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292
Query: 237 ILIYDVTMQKLKKAFYN 253
VT L F N
Sbjct: 293 CDPDKVTYTTLLYGFCN 309
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA++ F +MVER +P+ V Y T L ++++A++ M +
Sbjct: 271 GLCKESKPDEAHELFRKMVER-GCDPDKV-TYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 328
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L + QL+ +MV P+ + +N ++ L +D+
Sbjct: 329 DPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS--RECKPDTVSHNIMIDGLSKAKRLDDA 386
Query: 121 FRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F++M HG PD +TYN + L +++ E F E+ + + P P A
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP----HAFN 442
Query: 180 MLLDA 184
+LL+A
Sbjct: 443 VLLEA 447
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A + F EMV + +P+ V+AY L R + EA + +VM C
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSK-GHDPD-VVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D L K V++++ M P+L+ YN+++ LC +
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ-DHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECL 146
+ F ++ PD +N++ E +
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
++V+ LC VD+ + M+ G PD T++M+ L K K+ E + F M +
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 165 --NEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL-ENGILPLEASANVLLVGLRNLGR 221
+ + + + + L A + A I++ ++ E ++P S ++L+ G +
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 222 LSDVRRFAEEMLN 234
L + ++M++
Sbjct: 173 LGRAEKLYKQMID 185
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F M RF P+ + FL L + + D + KF R M G ++
Sbjct: 196 GMLEEAGQCFSRMT-RFRVFPK-ARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVF 253
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ + + K D L+ M +G L P+++ YN+++ +D F F+
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMG--LTPDIVTYNSLIDGYGKLGLLDESFCLFE 311
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G PD +TYN + C K +++ + +F HEM + +P + +T I L
Sbjct: 312 EMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEH 371
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ AI+ + G+ P E + L+ G LSD + A+EML ++ VT
Sbjct: 372 MLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYT 431
Query: 246 KLKKAFYNESRSM 258
L E R M
Sbjct: 432 TLLDGLCKEGRMM 444
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + L + + +A+KFL M+ P +++ +D K + ++L
Sbjct: 356 NVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLA 415
Query: 88 DIM--VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
D M V +GFN+ + Y ++ LC + F M+ G P+ TY +
Sbjct: 416 DEMLQVQVGFNV----VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHG 471
Query: 146 LIKNKKV 152
IKNK+V
Sbjct: 472 HIKNKRV 478
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN- 100
GK V EAL L+ M T+ F +D L K + + M FNL PN
Sbjct: 546 GKTV-EALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMAD--FNLQPNN 602
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ + A++ LC NN ++ + FD+M PD + Y + + +K+K E N
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
M + + + + L + + A N ++ GI+P E LL LG
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELG 722
Query: 221 RLSDVRRFAEEMLNR 235
+ + +E+L +
Sbjct: 723 SIDEAIELHDELLKK 737
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW +A + EMV+R P ++ +Y T L R Q++EA F MK +C
Sbjct: 214 GWCLIKRTNKALEMLKEMVKR-GLTP-NLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDC 271
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ + + +++D MV G ++P++ YNA + +LC ++VDN
Sbjct: 272 EIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKG--VLPSVATYNAFIQVLCKKDNVDNA 329
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++MV G P+S+TYN++ L ++ F M + +P I
Sbjct: 330 IVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRY 389
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
D E + A++++ + LP + N+L+ +
Sbjct: 390 FCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAM 425
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
A+K M CF L+ F+ LD+L K L+ + G + + YN
Sbjct: 154 RAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKG---KFRADCVSYNV 210
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+V C + +MV G P+ +YN + + + +++E +FF EM K +
Sbjct: 211 MVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRD 270
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ + T I A E + A ++++ +++ G+LP A+ N +
Sbjct: 271 CEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFI 317
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 73/196 (37%), Gaps = 7/196 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + A K F MV++ V Y F+ L + VD A+ M +
Sbjct: 284 GFGVAGEIKRARKVFDTMVKKGVL--PSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGY 341
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + ++ M G PN+ YN V+ C+ ++D
Sbjct: 342 VPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCE--PNVQTYNLVIRYFCDEGEIDKA 399
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV---ENFFHEMIKNEWQPTPLNCATA 177
F +M P+ TYN++ + KK ++ N EM+ + P
Sbjct: 400 LDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRV 459
Query: 178 ITMLLDADEPEFAIEI 193
+ LL FA EI
Sbjct: 460 LNGLLLTGNQGFAKEI 475
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND------STHTV 84
++ T L L + K+V+ A +V KG KF ++ + V +N + +
Sbjct: 173 SFNTILDVLCKSKRVEMAYNLFKVFKG-------KFRADCVSYNVMVNGWCLIKRTNKAL 225
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
++ MV G L PNL YN ++ ++ + FF +M D +TY +
Sbjct: 226 EMLKEMVKRG--LTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIH 283
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ F M+K P+ I +L D + AI I+ ++ G +P
Sbjct: 284 GFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVP 343
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N+++ GL + G + F M
Sbjct: 344 NSITYNLVIRGLCHRGEMERAMEFMGRM 371
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 13 KTFGEMVERF---EWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
K GE+ E F E N V LAY L L+ D KF + G+ P + +
Sbjct: 59 KRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAY 118
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
LD L+K + ++ M+ +P+ + Y A++ +LC +N D+ + FD M
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIK---KSVPDGMTYTALISVLCKHNRADDAMKVFDIM 175
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
V P+ Y + + +K+ F EMI+ + P+ + L +
Sbjct: 176 VEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML--NRRIL---IYDV 242
A +I + + G +P E + L+ G GR+++ + +E+L + +L IY+V
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNV 295
Query: 243 TMQKLKKA 250
++ L +A
Sbjct: 296 LIEGLCRA 303
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + EA F E++E E Y + L R +V+EAL+ M + C
Sbjct: 263 GCCMAGRITEAKVLFKEVLEG-EKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGC 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL+ ++ + K N+ +QL+ +M GF+ PN ++Y+ + LC ++
Sbjct: 322 IPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFS--PNTMIYSTFIDGLCKVGKINEA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
FF Q V G PD++TYN + L ++ E + EM
Sbjct: 380 HEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN ++ LC + V+ MV G P TYN + K +V + F M
Sbjct: 292 IYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVM 351
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ + P + +T I L + A E + +E G +P + N L+ GL R+
Sbjct: 352 EEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRM 411
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKL 247
+ R EM R I D +++ L
Sbjct: 412 DEAHRLYREM-GERGYIADRSLRTL 435
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
G+ + + F V++GE ++ ++ L + + +++ MV G +P L
Sbjct: 268 GRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKG--CIPTL 325
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
YNA++ N+VD + F M G P+++ Y+ + L K K++E FF +
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ P + I L A+ + A ++ + E G +
Sbjct: 386 SVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIA 428
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y + L EAL LR M+G C P ++ + + + +L
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D+M G L PNL+ +N+VV +C +++ + FD+MV G PD ++YN +
Sbjct: 216 DMMREGG--LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K HE + F EM + P + + I ++ A E A+ + + E G+ E
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ G G L D EM RI
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ A EM ER E + + + + +D+AL +R M+ P+
Sbjct: 309 KAGNLERAVGLVREMRERGLQMNE--ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS 366
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ + +L M G P+++ Y+ ++ C N D + F+
Sbjct: 367 VVCYNALINGYCMVGRMDEARELVREMEAKGVK--PDVVTYSTILSAYCKNGDTHSAFQL 424
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ +G PD++TY+ + L + K++ + F MI QP + + I
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK 484
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR-----FAEEMLNRRIL 238
E A+ + + +++ G+LP + +VL+ GL R + +R + EE + I
Sbjct: 485 EGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI- 543
Query: 239 IYDVTMQKLKKA 250
YD M+ + A
Sbjct: 544 KYDALMRCCRNA 555
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YNAV+ L ++ + + RFFD M+ G P+ TYN++ L E +
Sbjct: 121 PSVLAYNAVL-LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M P + T + A E + A + + + E G+ P + N ++ G+
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 219 LGRLSDVRRFAEEML 233
GR+ D R+ +EM+
Sbjct: 240 AGRMEDARKVFDEMV 254
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 73 ILVKLNDST--HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+L+ L+D++ + +D M+ G + PN+ YN +V LC M
Sbjct: 129 VLLALSDASLPSARRFFDSMLSDG--VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA 186
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P+++TYN + + +V E M + +P + + + + A E A
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDA 246
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
++++ +++ G+ P S N L+ G +G + EM + I+ VT L
Sbjct: 247 RKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 35/290 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K +MV R + +P V Y + +L + +VDEA + R++ +
Sbjct: 352 GLCKLGEIEEAVKILDQMVSR-DCSPNAV-TYNAIISSLCKENRVDEATEIARLLTSKGI 409
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG------------------------FN 96
P + F++ + L ++ + L++ M G G N
Sbjct: 410 LPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALN 469
Query: 97 LMP---------NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L+ N+++YN ++ C N ++ FD+M G DS+TYN + + L
Sbjct: 470 LLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLC 529
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K+V + +MI +P + +T + + A +I + +G P
Sbjct: 530 KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIV 589
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ L+ GL GR+ R + + +++ + +A + +R+
Sbjct: 590 TYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRT 639
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L ++++EAL L+ M+ C + ++ +D K +++D M
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + + + YN ++ LC + V++ + DQM+ G PD TYN + K
Sbjct: 510 ELQGVSR--DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + M + P + AT I+ L A + A + I G++ + N
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYN 627
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
++ L R + R EML++
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDK 652
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 39/268 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + +A E V + P+ Y T + L + A++ + M
Sbjct: 282 GFCKQGRIDQALSFIQEAVSE-GFRPDQ-FTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL 339
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD-- 118
P + +++ + L KL + V++ D MV + PN + YNA++ LC N VD
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVS--RDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 119 ---------------------------------NVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ F++M G PD TYNM+ +
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++K+ E N EM N + T I E A EI++ + G+
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
+ N L+ GL R+ D + ++M+
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 5/220 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F EM + + Y T + L + K+V++A + + M E
Sbjct: 492 GFCKNKRIEEAEEIFDEM--ELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L K D + M G N P+++ Y ++ LC V
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN--PDIVTYATLISGLCKAGRVQVA 607
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R + G YN + + L K + HE F EM+ P +
Sbjct: 608 SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRG 667
Query: 181 LLDADEP-EFAIEIWNYILENGILPLEASANVLLVGLRNL 219
L + P A++ ++E G +P +S +L GL L
Sbjct: 668 LCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 707
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 3/200 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + + +P+ + T + I G +D AL+ M C T + ++ K
Sbjct: 227 EEMPSYGLSPDET-TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ V GF P+ YN +V LC + D M+ G PD
Sbjct: 286 QGRIDQALSFIQEAVSEGFR--PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
TYN + L K ++ E +M+ + P + I+ L + + A EI
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403
Query: 197 ILENGILPLEASANVLLVGL 216
+ GILP + N L+ GL
Sbjct: 404 LTSKGILPDVCTFNSLIQGL 423
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 3/209 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + + K+++EA + M+ + ++ +D L K QL
Sbjct: 482 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLM 541
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ G L P+ YN+++ C D+ M G PD +TY + L
Sbjct: 542 DQMIMEG--LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V + TP I L + A+ ++ +L+ P
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659
Query: 208 SANVLLVGLRN-LGRLSDVRRFAEEMLNR 235
+ ++ GL N G + + F EM+ R
Sbjct: 660 TYKIVYRGLCNGGGPIGEAVDFTVEMIER 688
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 4/242 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + + L + QV A+ + M P F+ + ++ + +++ +
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G + N ++ C +D F + V G PD TYN + L K
Sbjct: 263 QMVEYGCPCTD--VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
M+ P + I+ L E E A++I + ++ P +
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES--RSMRDRFDSLE 266
N ++ L R+ + A + ++ IL T L + S +S D F+ ++
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440
Query: 267 RR 268
+
Sbjct: 441 GK 442
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 13/209 (6%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
YE L L + + + L MK C +F I V +S +L+D +V
Sbjct: 100 YEEILRKLGKAGSFEYMRRVLEEMKLSGC----EFDRGIFLIFV---ESYGKFELYDEVV 152
Query: 92 GI------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
GI + + P+ YN ++ +L + N + V MV D T+N++ +
Sbjct: 153 GIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKA 212
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K +V EM P T + ++ + A+ I ++E G
Sbjct: 213 LCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCT 272
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + NVL+ G GR+ F +E ++
Sbjct: 273 DVTVNVLINGFCKQGRIDQALSFIQEAVS 301
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN +++ ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVIFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + +V + EM +P + T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L+ GL GR D + EMLN
Sbjct: 330 EGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L V +EM
Sbjct: 298 LKQVHHLIDEM 308
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +AN+ F EM+ + P V+ + T + + +VD A++ + M ++
Sbjct: 221 GLCKESKMDDANELFDEMLVK-GLVPNGVI-FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K D L D M G L P+ I Y ++ C D+D
Sbjct: 279 LPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG--LKPDKITYTTLIDGCCKEGDLDTA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM+ D + Y + L + + + E EM+ +P I
Sbjct: 337 FEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINE 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ ++ + +G +P + NVL+ G
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P L+ G
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 260 NGRVDLAMEIYKQMLSQSLL 279
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E + EA EM E+ P+ V+ Y + R +AL M +N PT+
Sbjct: 370 EKRIEEAEDMIKEMREK-GVEPD-VVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTV 427
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ +++ +D+ K N + + + + G ++P++IM+NA++ C N ++D F+
Sbjct: 428 ETYTSLIDVFGKRNRMSEAEEKFKKSIKEG--MLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M PD +T+N + + + +KV E + EM + +P ++ T I+
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+E+++ +L G P + N L+ G +G EM ++ I D T
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 10/235 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFP 62
+EG +A G M E + P +V+ Y T + +RGK + A K + MK +N P
Sbjct: 229 REGKWKKAKDFIGHM-EVYGVKP-NVVTYNTVINGYCLRGK-FEAASKIFKTMKDKNLKP 285
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+++ + L K + ++ G L+PN + YNA++ CN D+D F
Sbjct: 286 DCYTYNSFISRLCKERRIEEASGVLCKLLESG--LVPNAVTYNALIDGCCNKGDLDKAFA 343
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ D+M+ G TYN++ L K++ E E+ EM + +P + I
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYC 403
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+ +++ ++E I P + L+ R+S+ AEE + I
Sbjct: 404 RCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE----AEEKFKKSI 454
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 3/243 (1%)
Query: 15 FGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
F E+ + R N + L ++ L + ++ DEAL+ L +MK P + ++ L +
Sbjct: 132 FNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSL 191
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L+KLN +++ MV + N+ +++ +N ++ +LC F M +G
Sbjct: 192 LLKLNKIKMAWFVYEEMVKM--NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVK 249
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+ +TYN + K F M +P + I+ L E A +
Sbjct: 250 PNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGV 309
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+LE+G++P + N L+ G N G L + +EM+NR I+ T L A +
Sbjct: 310 LCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFL 369
Query: 254 ESR 256
E R
Sbjct: 370 EKR 372
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
GN+ A + EM + + P+ V + T + R ++V+EA K L MK P
Sbjct: 476 GNIDRAFQLLKEM-DNAKVVPDEV-TFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHI 533
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ + K D ++++D M+ +GF+ P L+ YNA++ + D+
Sbjct: 534 SYNTLISGYSKRGDMKDALEVFDEMLSLGFD--PTLLTYNALIQGYSKIGEADHAEELLR 591
Query: 126 QMVFHGAFPDSLTYNMIFECLIKN 149
+M G PD TY + E + N
Sbjct: 592 EMQSKGITPDDSTYLYVIEAMKTN 615
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V YE + +L + ++D A K + MK N P+L FS+ +D + K +++++
Sbjct: 262 VSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYM 321
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G+G L P+ IMY +++ +D R +D+M G P+ Y +I E K
Sbjct: 322 EMQGLG--LRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAK 379
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K+ + F +M K + PTP ++ + M + + + A++++N + G+ P ++
Sbjct: 380 SGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLST 439
Query: 209 ANVLLVGLRNLGRLSDV 225
LL L + +L DV
Sbjct: 440 YTALLTLLAH-KKLVDV 455
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 3/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V EA K F EM+ + E PE V+ Y + ++D AL + M
Sbjct: 230 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVM-YNALIGGYCDQGKLDTALLYRDRMVERGV 288
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L T +L + M G G L ++ YN ++ C +V
Sbjct: 289 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL--DVFTYNILINGHCKEGNVKKA 346
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G +TY + L K +V E + F E ++ +P + I
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 406
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A EI + + I P + + N L+ GL LGR+ + R+ +EM R I
Sbjct: 407 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 463
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
V +AL+ M T+ +++ + L K T +L+D V G P+L++Y
Sbjct: 343 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR--PDLVLY 400
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
NA++ + ++D F +M PD +TYN + L +V E EM K
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 460
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
QP + T I+ + + A+ I N ++ G P + N L+ GL G+ D
Sbjct: 461 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 520
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+EM+ I D T L + E
Sbjct: 521 AENMVKEMVENGITPDDSTYISLIEGLTTE 550
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQL 86
+ + Y T + +V AL +R M+ P + + K+ V++
Sbjct: 184 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 243
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + P +MYNA++G C+ +D + D+MV G TYN++ L
Sbjct: 244 FDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302
Query: 147 IKNKKVHEVENFFHEM 162
+ + E EM
Sbjct: 303 FMDGRGTEAYELVEEM 318
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVEN 157
PN + YN V+ C+ V +M G P+ TY + K +V E
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242
Query: 158 FFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ K E +P + I D + + A+ + ++E G+ A+ N+L+ L
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302
Query: 217 RNLGRLSDVRRFAEEM 232
GR ++ EEM
Sbjct: 303 FMDGRGTEAYELVEEM 318
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA +MVE+ N + Y + L + +V+EA + M G C
Sbjct: 86 GLLKAGRLDEAMAVLEQMVEK--GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 143
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL--MPNLIMYNAVVGLLCNNNDVD 118
P ++ + L K L+ + +P+++ Y +++ LC +
Sbjct: 144 RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRIL 203
Query: 119 NVFRFFD-QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ FD + V G PD++TY I + L K +V E FHEM ++P + A
Sbjct: 204 EARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 263
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I + A A ++ +L++G + + N++L GL GR+++ M R
Sbjct: 264 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323
Query: 238 LIYDVTMQKLKKAFYNES 255
+ VT L F +E
Sbjct: 324 VATVVTYSALMDGFCSEG 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ + V+ LC +D F ++ V G PD +TYN+ + L K ++V +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M + + PT + + LL A + A+ + ++E G P + V++ GL
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 219 LGRLSDVRRFAEEMLN 234
GR+ + RR +ML
Sbjct: 125 AGRVEEARRIFVDMLG 140
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 5/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A++ + +M++ + Y L L + +V EA M+ C
Sbjct: 266 GFMKAKMIPKAHRVYRQMLQ--SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ +S +D + + V+L+ M+ G PNL+ YN ++ LC +
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE--PNLVSYNIIIRGLCRAGKLAKA 381
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKN-KKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +F++++ PD T+N L + V + F M+ P + + +
Sbjct: 382 YFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMD 441
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A E A+EI+ ++ G+ P N L+ L GR+ + E+ R
Sbjct: 442 GICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 8/229 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+P+ V A+ + L R K++DEA L C P ++ +D L K
Sbjct: 3 CSPDMV-AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDA 61
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
QL M +P + Y A+V L +D +QMV G P TY ++
Sbjct: 62 FQLLKKMDEK--KCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI----LE 199
+ L K +V E F +M+ N +P I L + +PE A ++
Sbjct: 120 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHH 179
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRR-FAEEMLNRRILIYDVTMQKL 247
+P + L+ GL GR+ + R+ F +E + R + VT +
Sbjct: 180 ATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSI 228
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 5/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V E + F EM R + P+ V Y + ++ K + +A + R M
Sbjct: 231 GLCKLGRVEEGCERFHEMRNR-GYEPDAV-TYAALIDGFMKAKMIPKAHRVYRQMLQSGT 288
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ LD L K + M G + ++ Y+A++ C+ +V
Sbjct: 289 VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG--CVATVVTYSALMDGFCSEGNVSAA 346
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G P+ ++YN+I L + K+ + +F ++++ P +
Sbjct: 347 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHG 406
Query: 181 LLDA-DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D +E++ ++ G P S ++L+ G+ G L EM++R +
Sbjct: 407 LCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGV 464
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 6/227 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA TF M ER V+ Y + V A++ R M C
Sbjct: 301 GLCKAGRVAEAYATFLAMEER--GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND-VDN 119
P L ++ + L + ++ + + L P++ +NA + LC D V +
Sbjct: 359 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKL--LQRRLCPDVYTFNAFLHGLCQRLDTVSD 416
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ MV G P+ +Y+++ + + + + F EM+ P + T I
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
L A + A+E++ LE P S LL GL R+ + R
Sbjct: 477 WLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEAR 522
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 13/248 (5%)
Query: 13 KTFGEMVERF---EWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
K GE+ E F E N V LAY L L+ D KF + G+ P + +
Sbjct: 59 KRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAY 118
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
LD L+K + ++ M+ +P+ + Y A++ +LC +N D+ + FD M
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIK---KSVPDGMTYTALISVLCKHNRADDAMKVFDIM 175
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
V P+ Y + + +K+ F EMI+ + P+ + L +
Sbjct: 176 VEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-----ILIYDV 242
A +I + + G +P E + L+ G GR+++ + +E+L IY+V
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNV 295
Query: 243 TMQKLKKA 250
++ L +A
Sbjct: 296 LIEGLCRA 303
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + EA F E++E + + + Y + L R +V+EAL+ M + C
Sbjct: 263 GCCMAGRITEAKVLFKEVLEGEKAQLDAGI-YNVLIEGLCRASKVEEALEVTAGMVDKGC 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL+ ++ + K N+ +QL+ M GF+ PN ++Y+ + LC ++
Sbjct: 322 IPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFS--PNTMIYSTFIDGLCKVGKINEA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
FF Q V G PD++TYN + L ++ E + EM
Sbjct: 380 HEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN ++ LC + V+ MV G P TYN + K +V + F M
Sbjct: 292 IYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAM 351
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ + P + +T I L + A E + +E G +P + N L+ GL R+
Sbjct: 352 EEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRM 411
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKL 247
+ R EM R I D +++ L
Sbjct: 412 DEAHRLYREM-GERGYIADRSLRTL 435
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
G+ + + F V++GE ++ ++ L + + +++ MV G +P L
Sbjct: 268 GRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKG--CIPTL 325
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
YNA++ N+VD + F M G P+++ Y+ + L K K++E FF +
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ P + I L A+ + A ++ + E G +
Sbjct: 386 SVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIA 428
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 14/261 (5%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ + V+ Y T + L + A++ LR M+ N
Sbjct: 153 GLCLEGQIGEALHLFDKMIWEGFQPD---VVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + + + L K T L+ M+ G + PN++ N++V LCN + +
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGIS--PNIVTCNSLVYALCNLGEWKH 267
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V ++MV P++++ + + L K V + + M ++ +P T
Sbjct: 268 VNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPD----VVTYT 323
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+D E + A+++++ ++ G P S N L+ G + R+ EEM +
Sbjct: 324 ALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQ 383
Query: 236 RILIYDVTMQKLKKAFYNESR 256
+++ VT L + R
Sbjct: 384 KLIPNTVTYNTLIHGLCHVGR 404
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 62/157 (39%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + ++ LC + FD+M++ G PD + Y + L K
Sbjct: 142 PDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRL 201
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M K QP + T I L + A +++ ++ GI P + N L+ L N
Sbjct: 202 LRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCN 261
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
LG V EM++ +I+ +++ + A E
Sbjct: 262 LGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEG 298
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 9/249 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM R + P V Y T + L ++ +A+ R M
Sbjct: 363 GYCKIERMDKAMYLFEEMC-RQKLIPNTV-TYNTLIHGLCHVGRLQDAIALFREMVACGQ 420
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K + H + ++ I G NL P++ +Y V+ +C ++++
Sbjct: 421 IPDLVTYRILLDYLCK---NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELED 477
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TYN++ L K + E F EM +N T
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQ 537
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL--SDVRRFAEEMLNRRI 237
L +E AI++ +L G + S LLVG+ + L S+ + + + RI
Sbjct: 538 GFLRNNETSRAIQLLEEMLARG-FSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRI 596
Query: 238 LIYDVTMQK 246
+ D K
Sbjct: 597 QVKDTVFCK 605
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 8/212 (3%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D L K + D+M G P+++ Y A++ C +++D
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE--PDVVTYTALIDGHCLRSEMDEA 338
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD MV G P+ +YN + K +++ + F EM + + P + T I
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + AI ++ ++ G +P + +LL L L + + L+
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
I IY + + + +A E RD F +L +
Sbjct: 459 IQIYTIVIDGMCRA--GELEDARDLFSNLSSK 488
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G A + EM+ F N ++ + + L D AL+F+ M N
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQG---SFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + L K + ++LW + GF + + NA++ LC +D
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDE 523
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
FR +++ G D ++YN + KK+ E F EM+K +P + I
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + ++ E AI+ W+ NG+LP + +V++ G R + + F +EM+++ +
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 240 YDVTMQKLKKAFYNESR 256
V L +A+ R
Sbjct: 644 NTVVYNHLIRAYCRSGR 660
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+MVER P ++ Y + L R K++ +A L+ M + P + ++N +D ++
Sbjct: 320 KMVER-GMEPT-LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+++ D+MV G +L + YN ++ C N DN R +M+ G +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
++ + L + F EM+ P T I+ L + A+E+W
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G + ++N LL GL G+L + R +E+L R ++ V+ L
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 35 FLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
L +L+R + + + F V KG + P + F+ A++ K V+L+ M
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + PN++ +N V+ L D F F ++MV G P +TY+++ + L + K++
Sbjct: 290 G--VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM K + P + I ++A AIEI + ++ G+ ++ N L+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 214 VGLRNLGRLSDVRRFAEEMLN 234
G G+ + R +EML+
Sbjct: 408 KGYCKNGQADNAERLLKEMLS 428
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 4/230 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EMV+R P++ Y + L +V+EA++F K P + +S +D K
Sbjct: 565 EMVKR-GLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ + +D M + N+ PN ++YN ++ C + + + M G P+S
Sbjct: 623 AERTEEGQEFFDEM--MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
TY + + + +V E + F EM +P + I + +
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+ + P + + V++ G G +++ R EM + I+ +T ++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G A + EM+ F N ++ + + L D AL+F+ M N
Sbjct: 398 GYCKNGQADNAERLLKEMLSIGFNVNQG---SFTSVICLLCSHLMFDSALRFVGEMLLRN 454
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + L K + ++LW + GF + + NA++ LC +D
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDE 512
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
FR +++ G D ++YN + KK+ E F EM+K +P + I
Sbjct: 513 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 572
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + ++ E AI+ W+ NG+LP + +V++ G R + + F +EM+++ +
Sbjct: 573 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632
Query: 240 YDVTMQKLKKAFYNESR 256
V L +A+ R
Sbjct: 633 NTVVYNHLIRAYCRSGR 649
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+MVER P ++ Y + L R K++ +A L+ M + P + ++N +D ++
Sbjct: 309 KMVER-GMEPT-LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 366
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+++ D+MV G +L + YN ++ C N DN R +M+ G +
Sbjct: 367 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 424
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
++ + L + F EM+ P T I+ L + A+E+W
Sbjct: 425 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 484
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G + ++N LL GL G+L + R +E+L R ++ V+ L
Sbjct: 485 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 535
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 35 FLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
L +L+R + + + F V KG + P + F+ A++ K V+L+ M
Sbjct: 221 LLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 278
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + PN++ +N V+ L D F F ++MV G P +TY+++ + L + K++
Sbjct: 279 G--VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 336
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM K + P + I ++A AIEI + ++ G+ ++ N L+
Sbjct: 337 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 396
Query: 214 VGLRNLGRLSDVRRFAEEMLN 234
G G+ + R +EML+
Sbjct: 397 KGYCKNGQADNAERLLKEMLS 417
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 4/230 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EMV+R P++ Y + L +V+EA++F K P + +S +D K
Sbjct: 554 EMVKR-GLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 611
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ + +D M + N+ PN ++YN ++ C + + + M G P+S
Sbjct: 612 AERTEEGQEFFDEM--MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 669
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
TY + + + +V E + F EM +P + I + +
Sbjct: 670 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 729
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+ + P + + V++ G G +++ R EM + I+ +T ++
Sbjct: 730 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 779
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + +D A L+ M C P + ++ +D L K +Q
Sbjct: 45 VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 104
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ-MVFHGAFPDSLTYNMIFECLI 147
M+ G P+L+ YN+++ LC N +D+ + M+ G PD +TYN L
Sbjct: 105 RMLRSGCE--PDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLC 162
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+ + EM + P + + I+ L A+ + A +++ +LE G +P
Sbjct: 163 KAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEML 233
+ +++L L RL V E M+
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMV 248
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 71/311 (22%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ A +M + +V+ Y + L + ++ +A++ ++ M C
Sbjct: 54 GLCKSGDLDAAQALLQKMAD--AGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGC 111
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVG-----IGFN---------------- 96
P L +++ + L +++D+ +Q I G + +N
Sbjct: 112 EPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGL 171
Query: 97 ----------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ P+++ + +++ LC N +D+ F+ F M+ G PDSLTY+++ + L
Sbjct: 172 EMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 231
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA-------------IEI 193
+ ++ VE M+K+ A I L+ A + E A +E+
Sbjct: 232 SRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEV 291
Query: 194 WNY----------------------ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ + ++E+G LP S N ++ GL G + D + + +
Sbjct: 292 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 351
Query: 232 MLNRRILIYDV 242
ML+ DV
Sbjct: 352 MLDSGCCKPDV 362
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L K H ++L +M G++ +++ Y ++ LC + D+D +M G
Sbjct: 20 LCKARKPRHALELLHVMAANGYD--ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCA 77
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA-IE 192
P+ +TY + + L K ++ H+ M+++ +P + + I L A+ + A +
Sbjct: 78 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 137
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ ++E+G +P + N + GL G+L EEM
Sbjct: 138 LQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 12/268 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + + + EM +R +P+ V+ + + + L + ++D+A + + M C
Sbjct: 160 GLCKAGKLDKGLEMLEEM-DRGGISPD-VVTFCSIISGLCKANRIDDAFQVFKGMLERGC 217
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S LD L + N ++ + MV G + Y ++ L D+++
Sbjct: 218 VPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALS--ATYAPLIHALIRAGDIESA 275
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++Q + G + T+N L ++ K +N MI++ P L+ I
Sbjct: 276 SWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 335
Query: 181 LLDADEPEFAIEIWNYILENGIL-PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + + A ++ +L++G P N L+ G GRLS ++ +EM + I +
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV 395
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLER 267
DV YN + +F SL++
Sbjct: 396 PDVVT-------YNTMIDGQSKFGSLKQ 416
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 53/140 (37%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN ++ LC + M +G +TY + + L K+ + + +M
Sbjct: 12 IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P + I L A P AI+ +L +G P + N L+ GL R+
Sbjct: 72 ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131
Query: 223 SDVRRFAEEMLNRRILIYDV 242
D +E++ I DV
Sbjct: 132 DDAGLVLQELMIESGRIPDV 151
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G A + EM+ F N ++ + + L D AL+F+ M N
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQG---SFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + L K + ++LW + GF + + NA++ LC +D
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDE 536
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
FR +++ G D ++YN + KK+ E F EM+K +P + I
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + ++ E AI+ W+ NG+LP + +V++ G R + + F +EM+++ +
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 240 YDVTMQKLKKAFYNESR 256
V L +A+ R
Sbjct: 657 NTVVYNHLIRAYCRSGR 673
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+MVER P ++ Y + L R K++ +A L+ M + P + ++N +D ++
Sbjct: 333 KMVER-GMEPT-LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+++ D+MV G +L + YN ++ C N DN R +M+ G +
Sbjct: 391 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
++ + L + F EM+ P T I+ L + A+E+W
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G + ++N LL GL G+L + R +E+L R ++ V+ L
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 35 FLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
L +L+R + + + F V KG + P + F+ A++ K V+L+ M
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 302
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + PN++ +N V+ L D F F ++MV G P +TY+++ + L + K++
Sbjct: 303 G--VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 360
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM K + P + I ++A AIEI + ++ G+ ++ N L+
Sbjct: 361 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 420
Query: 214 VGLRNLGRLSDVRRFAEEMLN 234
G G+ + R +EML+
Sbjct: 421 KGYCKNGQADNAERLLKEMLS 441
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 4/230 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EMV+R P++ Y + L +V+EA++F K P + +S +D K
Sbjct: 578 EMVKR-GLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ + +D M+ N+ PN ++YN ++ C + + + M G P+S
Sbjct: 636 AERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
TY + + + +V E + F EM +P + I + +
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+ + P + + V++ G G +++ R EM + I+ +T ++
Sbjct: 754 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 135 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 192
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM E +P + T I
Sbjct: 251 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCK 310
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L+ GL GR D + EMLN
Sbjct: 311 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 101 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 158
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 159 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 218
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 278
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 279 LKQAHHLIDEM 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 156 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 213
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + + P + + L+ G G L + M+ I + +
Sbjct: 274 CKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 333
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 334 VAYTALISGLCQEGRSV 350
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 59/139 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 219 LGRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSL 259
>gi|413923666|gb|AFW63598.1| hypothetical protein ZEAMMB73_713200 [Zea mays]
Length = 120
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E F +M+KNE P NC+ A+ M LD E I +W+ ++ENG+ PLE N+L+
Sbjct: 5 EAAPIFSKMVKNECWPNEGNCSLALQMFLDTHYWETGINVWSCMVENGLPPLEECGNMLV 64
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
L++ RL + ++AE+M++R I + T+ KLK+ + + + D L ++WK
Sbjct: 65 SKLKD-DRLPEACKYAEDMIDRGIKLSSSTLSKLKQCLHKIKKG--EIHDHLLKKWKA 119
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPE-----HVLAYETFLITLIRGKQVDEALKFLRVM 55
G + G + A F EM++R + + +V+ Y + L + +V +A++ L M
Sbjct: 158 GLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM 217
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNN 114
K C P + ++ +D L K + W+++ + +PNL+ YN+++ LC
Sbjct: 218 KARGCSPDVITYTILVDGLCK---ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
V + M G P+ +TY + + L K +V + +MI P +
Sbjct: 275 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 334
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
I L AD+ + +I + + GI P + + ++ GL RL + R + +
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394
Query: 235 RR----ILIYDVTMQKLKKA 250
R +++Y + L KA
Sbjct: 395 RGCPPDVILYSTLIDGLCKA 414
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + L R ++DEA + L +K C P + +S +D L K L++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M G G + +++ Y+ ++ LC VD +MV G P ++TYN + + L
Sbjct: 426 VMAGDGCD--ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY----ILENGILP 204
+ E EM ++ P+ + I + + + A+ + + G
Sbjct: 484 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTA 543
Query: 205 LEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
L+ A + L+ GL GR+++ + +EM++ + + Y + ++ LKK+
Sbjct: 544 LDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A +M+++ P+ ++ Y + L + QVDE++ LR
Sbjct: 305 GLCKVGRVKDACAMLADMIDK-GGTPD-LMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + L + N +L + G P++I+Y+ ++ LC VD
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP--PDVILYSTLIDGLCKAGKVDEA 420
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M G D +TY+ + + L K +V E M++ P+ + + I
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D + + AIE+ + + P + N+L+ G+ + R+ E+ R +
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCV 537
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 11/259 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A EM R +V+ Y + + L + + D A + MK C
Sbjct: 88 GLWKEKRLDQALAILHEM--RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVEC 145
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM-----PNLIMYNAVVGLLCNNN 115
P++ ++ LD L + + L+ M+ + M PN+I Y+ ++ LC N
Sbjct: 146 SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKAN 205
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
V + M G PD +TY ++ + L K KV EM+ P +
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + L A A+ + + G P + L+ GL +GR+ D +M+++
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 325
Query: 236 R----ILIYDVTMQKLKKA 250
++IY++ + L KA
Sbjct: 326 GGTPDLMIYNMLINGLCKA 344
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 35/265 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE V A + EM++ +++ Y + L L R ++V +AL +R M C
Sbjct: 235 GLCKESKVAAAWEVLREMLD--AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292
Query: 61 FPTLKFFSNALDILVKLN---------------DSTHTVQLWDIMV-------------- 91
P + + +D L K+ T + ++++++
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352
Query: 92 ----GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + P+++ Y++V+ LC +N +D R + G PD + Y+ + + L
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K KV E + + M + + +T I L A + A + ++ G P
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ GL +L L + EEM
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEM 497
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 9/235 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y L RG ++D+A + M+ +N P + S +D L K S ++ +
Sbjct: 9 VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G ++ + ++Y A++ L +D +M HG P+ +TYN + + L K
Sbjct: 69 AMQGSG--IVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL-------ENG 201
N + + F M E P+ + T + L + E A+ ++ +L ++
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + +VL+ GL R+S E M R +T L ES+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V +A + M R +P+ V+ Y + L + +V A + LR M C
Sbjct: 200 GLCKANRVSQAVELLESMKAR-GCSPD-VITYTILVDGLCKESKVAAAWEVLREMLDAGC 257
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +++ L L + + + L M G PN++ Y ++ LC V +
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCT--PNVVTYGTLIDGLCKVGRVKDA 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G PD + YNM+ L K +V E + +P + ++ I
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L ++ + A + Y+ G P + L+ GL G++ + E M +
Sbjct: 376 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDAD 435
Query: 237 ILIYDVTMQKLKKA 250
++ Y + L KA
Sbjct: 436 VVTYSTLIDGLCKA 449
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA+ MV P + Y + + L +DEA++ + M+ NC
Sbjct: 445 GLCKAGRVDEAHLLLARMVRM--GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNC 502
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDI----MVGIGFNLMPNLIMYNAVVGLLCNNND 116
P+ ++ + + ++ V L + V G + + I Y++++ LC
Sbjct: 503 APSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTAL-DTIAYSSLIDGLCKAGR 561
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF-FHEMIKNEWQ 168
V +F +M+ +G PD +TY+++ E L K+K +HE+ + +M++ ++
Sbjct: 562 VAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L ++D+A + M+ + P + +D K+ D + W+
Sbjct: 305 VITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWN 364
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G+ P+++ Y ++ LC + DVD F D M G FP+ TYN + L+K
Sbjct: 365 EMEVDGY--APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+++ E M +PT + I + +P AI+ + + + GI+P A+
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLN 234
N L L GR+S+ AE++ N
Sbjct: 483 CNASLYTLAETGRISE----AEDIFN 504
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R K +D F + K PTL+ ++ +D L+ N + ++L++ M G + PN
Sbjct: 773 RKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH--PN 830
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
YN ++ + ++ ++ + +M G P+++T+N+I L+K+ +++ + ++
Sbjct: 831 NFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYY 890
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
E++ ++ PTP I LL A E A++I+ +L+ G P N+L+ G G
Sbjct: 891 ELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSG 950
Query: 221 RLSDVRRFAEEMLNRRI 237
+ FA E+ + +
Sbjct: 951 EID----FACELFKKMV 963
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L++ +++DEAL+ L M+ PT + +D K D + ++ M
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETM 471
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G +MP++ NA + L + F+ + G PDS+TYNM+ +C K
Sbjct: 472 KKRG--IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + EMI +P + + I L A + A +++ + + P + N
Sbjct: 530 QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN 589
Query: 211 VLLVGLRNLGRL 222
+LL GL G++
Sbjct: 590 ILLTGLGKEGKI 601
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + +A + EM+ + P+ V+ + + TL + +VD A K +K
Sbjct: 525 YSKAGQIDKATQLLSEMISK-GCEPD-VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLA 582
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K ++L+ M G PN I +N+++ L N+ VD
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTESG--CPPNTITFNSLLDCLSKNDAVDLAL 640
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ F +M PD LTYN I LI+ ++ FFH+M K P + T I +
Sbjct: 641 KMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGV 699
Query: 182 LDADEPEFAIEI 193
+ E AI++
Sbjct: 700 VRHGRVEDAIKV 711
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + + + L++ +++AL + + PT + +D L+K S ++++
Sbjct: 865 NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ G PN ++YN ++ + ++D F +MV G PD +Y ++ ECL
Sbjct: 925 EEMLDYGCG--PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
++ E +F E+ P ++ I L + + A+ +++ + GI P
Sbjct: 983 ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L++ L G++ + EE+
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEEL 1067
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L++ + ++A+K M C P ++ ++ K + +L+ M
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V G + P+L Y +V LC +D ++F+++ G PD+++YN I L K++
Sbjct: 963 VKEG--IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSR 1020
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E + F EM P I L A + + A++++ + G+ P + N
Sbjct: 1021 RLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYN 1080
Query: 211 VLLVG 215
L+ G
Sbjct: 1081 ALIRG 1085
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 5/233 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA F ++ + +P+ V Y + + Q+D+A + L M + C P +
Sbjct: 494 GRISEAEDIFNDL-HKCGLSPDSV-TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVM 551
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ ++ L K +++ + + L P ++ YN ++ L + F
Sbjct: 552 IINSLINTLYKAGRVDAAWKMFGRLKNL--KLAPTVVTYNILLTGLGKEGKILKALELFG 609
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G P+++T+N + +CL KN V F M P L T I L+
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++A ++ ++ + P + L+ G+ GR+ D + E +++ L
Sbjct: 670 RIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL 721
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 33/230 (14%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
LI L+ +EALK + M E P++K +S + L + D+ + L + M IG
Sbjct: 207 LIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGL 266
Query: 96 ---------------------------------NLMPNLIMYNAVVGLLCNNNDVDNVFR 122
P++I Y ++ LC +D
Sbjct: 267 RPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKE 326
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ +M PD +TY + + K + V+ F++EM + + P + I L
Sbjct: 327 LYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALC 386
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + + A ++ + + GI P + N ++ GL RL + E M
Sbjct: 387 KSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENM 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 4/198 (2%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW-DIMVGIGFNLMP 99
+ K++++ M+ C P + + LVK N+ + L+ ++M G + P
Sbjct: 843 KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG---DFSP 899
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
Y ++ L + + F++M+ +G P+S+ YN++ K+ ++ F
Sbjct: 900 TPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELF 959
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+M+K +P + + L + A++ + + G+ P S N ++ GL
Sbjct: 960 KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKS 1019
Query: 220 GRLSDVRRFAEEMLNRRI 237
RL + EM NR I
Sbjct: 1020 RRLDEALSLFSEMKNRGI 1037
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 3/211 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
+P+ V Y T + + ++ +F M+ + P + ++ ++ L K D
Sbjct: 337 SPDRV-TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+ D+M G + PNL YN ++ L +D + M G P + +Y + +
Sbjct: 396 DMLDVMTTKG--IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K+ + + F M K P+ C ++ L + A +I+N + + G+ P
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N+L+ G++ + EM+++
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 7/218 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +++A + FG M E P + + + + L L + VD ALK M NC
Sbjct: 594 GLGKEGKILKALELFGSMTE--SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNC 651
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L++ + + M L P+ + ++ + + V++
Sbjct: 652 NPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF---LSPDYVTLCTLIPGVVRHGRVEDA 708
Query: 121 FRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + V +S + + EC++ ++ E +F ++ N I
Sbjct: 709 IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768
Query: 180 MLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
+L + A +++ +N GI P S N L+ GL
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGL 806
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGEN 59
K G A + F EM++ + P+ TF I LIRG VDE F + M
Sbjct: 212 KRGRTSMAKQLFDEMLDTYGVTPDTY----TFNI-LIRGFCMNSMVDEGFWFFKEMSRFK 266
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ +D L + + MV NL PN++ Y ++ C D+
Sbjct: 267 CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAI 178
+MV G P+ +TYN + + L + +K+ +++ M+ + + P T I
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ E A ++ + E + P A+ +VL+ L G F +E+ + IL
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 239 IYDVTMQKLKKAF 251
++DV + L A+
Sbjct: 447 LHDVGCKPLVAAY 459
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 112/283 (39%), Gaps = 20/283 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ EA EMV R P + Y T + L +++D+ + L M G+
Sbjct: 317 GYCMKQDMAEALSLLAEMVSR-GLKPNKI-TYNTLIQGLCEAQKLDKIKEILEGMVGDGG 374
Query: 61 F-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F P + + + +++ M + + P+ Y+ +V LC D
Sbjct: 375 FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL--RVQPDSATYSVLVRSLCQRGDFRR 432
Query: 120 VFRFFDQM-----VFH--GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
FFD++ + H G P YN +FE L N K + E F +++K Q P
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP- 491
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ T I PE ++ +L +P + +++ GL G + E+M
Sbjct: 492 SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKM 551
Query: 233 LNRRIL-----IYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
L L + + ++K +ES S+ LERR +
Sbjct: 552 LKSSHLPTTAIFHSILAALVEKGCAHESASLVKLM--LERRIR 592
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGEN 59
K G A + F EM++ + P+ TF I LIRG VDE F + M
Sbjct: 212 KRGRTSMAKQLFDEMLDTYGVTPDTY----TFNI-LIRGFCMNSMVDEGFWFFKEMSRFK 266
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ +D L + + MV NL PN++ Y ++ C D+
Sbjct: 267 CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAI 178
+MV G P+ +TYN + + L + +K+ +++ M+ + + P T I
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ E A ++ + E + P A+ +VL+ L G F +E+ + IL
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 239 IYDVTMQKLKKAF 251
++DV + L A+
Sbjct: 447 LHDVGCKPLVAAY 459
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 112/283 (39%), Gaps = 20/283 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ EA EMV R P + Y T + L +++D+ + L M G+
Sbjct: 317 GYCMKQDMAEALSLLAEMVSR-GLKPNKI-TYNTLIQGLCEAQKLDKIKEILEGMVGDGG 374
Query: 61 F-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F P + + + +++ M + + P+ Y+ +V LC D
Sbjct: 375 FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL--RVQPDSATYSVLVRSLCQRGDFRR 432
Query: 120 VFRFFDQM-----VFH--GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
FFD++ + H G P YN +FE L N K + E F +++K Q P
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP- 491
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ T I PE ++ +L +P + +++ GL G + E+M
Sbjct: 492 SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKM 551
Query: 233 LNRRIL-----IYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
L L + + ++K +ES S+ LERR +
Sbjct: 552 LKSSHLPTTAIFHSILAALVEKGCAHESASLVKLM--LERRIR 592
>gi|302763057|ref|XP_002964950.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
gi|300167183|gb|EFJ33788.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
Length = 464
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + DEA K + M N P + L+++++ + + D+MV +GF
Sbjct: 241 LCKSGRPDEACKVMETMLLRNIEPNIL----TLNLILQAARPEEALGMTDVMVEMGF--C 294
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++ +NA++ L CN + +D+ + M P+ +TY+++ + + ++ E F
Sbjct: 295 PTIVTFNALLELFCNTDQMDSATELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAF 354
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++ + P L C + L E + A + E G A+ N L+ G
Sbjct: 355 LEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCK 414
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
LGR+ + R EEM+ L Y+V +Q L A
Sbjct: 415 LGRMDEAERVLEEMIAEGSLPDSTTYNVLIQGLCSA 450
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 2/147 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
Q+D A + L M C P +S + ++ + +V G+ PNL++
Sbjct: 312 QMDSATELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGY--APNLLV 369
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
NA V LC ++D RF M G ++ TYN + E K ++ E E EMI
Sbjct: 370 CNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMI 429
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFA 190
P I L A + E A
Sbjct: 430 AEGSLPDSTTYNVLIQGLCSAGQIEHA 456
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 8/158 (5%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN + YNA+ L +D F M G ++T+N + E L K+ + E
Sbjct: 191 GVAPNRVAYNAMARGLSKAGLLDEAFDLMGVMESAGFALTAVTFNPVVEFLCKSGRPDEA 250
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
M+ +P L + ++L A PE A+ + + ++E G P + N LL
Sbjct: 251 CKVMETMLLRNIEPNILT----LNLILQAARPEEALGMTDVMVEMGFCPTIVTFNALLEL 306
Query: 216 LRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
N ++ E M + + Y + +QK +
Sbjct: 307 FCNTDQMDSATELLETMARSKCKPNFVTYSIMVQKFAE 344
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A + F +MV + +P+ V+ + + + L ++++AL+ L + C PT
Sbjct: 293 KMGRLDDAYELFQQMVAN-KLSPD-VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D K N +L GF +PN + YN +V C D ++
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGF--VPNTVTYNILVAGCCRAGRTDQALQY 408
Query: 124 FDQMVFHGA-FPDSLT-YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
DQ+ G P S+ Y +I + L ++ + + F+ EMI+ + P AT + L
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A +P+ A E+ +++ G P + + ++ G + A E+
Sbjct: 469 CKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 34/235 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + R ++VDEA F+ M E C P + ++ + K D ++L
Sbjct: 144 VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLG 203
Query: 89 IMVGIGF------------------------------NLMPNLIMYNAVVGLLCNNNDVD 118
+ GF + P I YN+++G C D+D
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMD 263
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
R +MV PD +TY + K ++ + F +M+ N+ P + + +
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L E A+E+ I G P + N ++ G ++ R AEE++
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV----RKAEELV 374
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 8/213 (3%)
Query: 23 EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP---TLKFFSNALDILVKLND 79
+ +P L Y + L + +++ +A++ L+ M P TL +L + +++D
Sbjct: 33 DAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDD 92
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+ +L + M+ G + N I Y+A+V LC +D + M G P +TY
Sbjct: 93 AR---ELVEEMLHRG--MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTY 147
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N I + ++V E F +M+ P + I + + +E+ +
Sbjct: 148 NSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTR 207
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G P + + ++ GL GRL D EEM
Sbjct: 208 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V + GE V R + P+ ++ Y T + L + ++ +A+ M +C
Sbjct: 188 GFCKSRDVGRGLELLGE-VTRRGFTPD-IVTYSTVIDGLCKAGRLRDAVDIFEEM---SC 242
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +++ + + D ++L MV P+++ Y ++ C +D+
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVD--DKCAPDVVTYTTLMSAFCKMGRLDDA 300
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F QMV + PD +T+ + + L ++ + E+ + PT +
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A++ A E+ G +P + N+L+ G GR ++ +++
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 412
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 1/158 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P +++N V+G LC + + + QM PD LTY + L K +++ +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM+ P + L D + A E+ +L G+ + + L+ GL
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
RL + E M R VT + F R
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/135 (17%), Positives = 53/135 (39%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + Y +V L + + + +MV PD+ T ++ + L +V +
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM+ + + + L + + A+ + + E G P + N ++ G
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 219 LGRLSDVRRFAEEML 233
R+ + F E+M+
Sbjct: 157 ARRVDEAHGFMEQMV 171
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA K F +M E P V Y + L + EAL MK + C
Sbjct: 273 GLCEAGRINEALKLFADMTED-NCCPT-VRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K N ++ M G L+P+++ YNA++ C +D+
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG--LIPSVVTYNALIDGYCKEGMIDDA 388
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D M + P++ TYN + L K +KVH+ ++M++ + P+ + + I
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
++ E A + + + ENG++P + + +V + L GR+ +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ V +A +M+ER + +P ++ Y + + + ++ A + L +M
Sbjct: 413 GLCKKRKVHKAMALLNKMLER-KLSPS-LITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D L K L+D + G N ++Y A++ C +D
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK--ANEVIYTALIDGYCKVGKIDVA 528
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M+ P+S TYN++ E L K KK+ E + +M+ +PT + I
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L + A++++N+++ G P + L + G L +V +M IL
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 38/275 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVL----------------AYETFLITLIRGKQ 44
G+ K GNVVEA + + + + +P+ AYE FLI +G Q
Sbjct: 203 GYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261
Query: 45 ------------------VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++EALK M +NC PT++ ++ + L + L
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ M G PN+ Y ++ LC N +D + +M G P +TYN + +
Sbjct: 322 FNEMKEKGCE--PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K + + M N P I L + A+ + N +LE + P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ N L+ G + L R ++N L+ D
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPD 473
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 4/245 (1%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
F++ P + Y T L++L + +DE + P + F+ ++ K+ +
Sbjct: 153 FKFKPT-LRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+V G L P+ Y +++ C N VDN + F M G + ++Y
Sbjct: 212 EAELYASKIVQAG--LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN 269
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L + +++E F +M ++ PT I L + A+ ++N + E G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
P + VL+ GL ++ + R+ EM + ++ VT L + E + D
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM-IDDA 388
Query: 262 FDSLE 266
F+ L+
Sbjct: 389 FEILD 393
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 34/237 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G A K F MV + P+ V Y FL ++E + M E P
Sbjct: 591 KDGAFDHALKVFNHMVS-LGYQPD-VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN-------- 115
L ++ +D +L + MV G P+L + + ++ L + N
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK--PSLYIVSILIKNLSHENRMKETRSE 706
Query: 116 -DVDNV---------FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+D+V + F++MV HG D Y + + +++ E + H M +
Sbjct: 707 IGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 766
Query: 166 EWQPTP------LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
P+ L+C + + + A+ + + ++ENG+LPL S +L+ GL
Sbjct: 767 GMSPSEDIYNSLLDCCCKLGVYAE------AVRLVDAMVENGLLPLLESYKLLVCGL 817
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 8/249 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G VEA F EM E+ +V Y + L + ++DEA K L M + P++
Sbjct: 312 SGRKVEALNLFNEMKEK--GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ +D K ++ D+M PN YN ++ LC V
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCG--PNTRTYNELICGLCKKRKVHKAMALL 427
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M+ P +TYN + K + M +N P + I L
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IY 240
E A +++ + G+ E L+ G +G++ E MLN L Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547
Query: 241 DVTMQKLKK 249
+V ++ L K
Sbjct: 548 NVLIEGLCK 556
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 7/176 (3%)
Query: 1 GWEKEGNVVE---ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
G + N +E A K F +MVE V Y + + ++++EA + MK
Sbjct: 708 GIDSVSNTLEYEIALKLFEKMVEH--GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P+ +++ LD KL V+L D MV G L+P L Y +V L
Sbjct: 766 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG--LLPLLESYKLLVCGLYIEGSN 823
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ F ++ G D + + ++ + L+K V E M + QP PL
Sbjct: 824 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLT 879
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 22/272 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + A + EMV R P+ V+ Y + + L R ++D A + +R MK +
Sbjct: 86 GFCKQGEMDRACEILREMVTRDGIAPD-VVTYTSVVDGLCRDGKMDRACEMVREMKLKGV 144
Query: 61 FPTLKFFSNAL----------DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
P KF +AL D +KL T W P+++ Y A++
Sbjct: 145 EPD-KFTFSALITGWCNARKVDEALKLYKEILTSSSWK----------PDVVTYTALIDG 193
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
C + +++ + M P+ +TY+ + L K + + + F M P
Sbjct: 194 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 253
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
+ T I L A + + A + + + P S N LL G LGR+ + ++ +
Sbjct: 254 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
EM + L +T L + F N SR RF
Sbjct: 314 EMATKSCLPDRITYTCLVRGFCNASRLEEARF 345
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 5/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ +A F M + +V+ Y T + L +VD A + M C
Sbjct: 228 GLCKAGDLDQALDLFRRMTSK--GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ LD +L QL+ M + +P+ I Y +V CN + ++
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT--KSCLPDRITYTCLVRGFCNASRLEEA 343
Query: 121 FRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ M G PD +TY+++ + K+ E F EMI P + ++ I
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L A + A+E+ ++ + P + N ++ L LG + + + M +
Sbjct: 404 GLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463
Query: 240 YDVTMQKLKKAFYNESR 256
VT L + F R
Sbjct: 464 GMVTYTTLLEGFSRTGR 480
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + R K+ EA +F++ M N P +S+ +D L K H +++
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV + P++ +N+V+G LC D+D ++ M HG P +TY + E +
Sbjct: 420 NMVN--KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477
Query: 149 NKKVHEVENFFHEM 162
++ F M
Sbjct: 478 TGRMEIAYELFEVM 491
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 9/235 (3%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
E P V+ + + + Q+ +AL M+ E P + ++ ++ L K ++
Sbjct: 1 MECQP-TVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTS 58
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYN 140
++ M G ++ P+L+ Y+ V+ C ++D +MV G PD +TY
Sbjct: 59 KAYEVLKEMRD-GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYT 117
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ + L ++ K+ EM +P + IT +A + + A++++ IL +
Sbjct: 118 SVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTS 177
Query: 201 GI-LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
P + L+ G G L + M R+ ++ Y + L KA
Sbjct: 178 SSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 232
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW+ + EA F EM E P+ V++Y + +G++++ A K + M+ E
Sbjct: 240 GWK---SAEEAEGFFDEMRE-MGVEPD-VVSYNCLIDVYCKGREIERAYKVIDKMRDEQI 294
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L + + M G P++ YNA + C N + +
Sbjct: 295 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG--CYPDVAAYNAAIRNFCIANRLGDA 352
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+MV G P++ TYN+ F C + + + M K P +C +
Sbjct: 353 DGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRL 412
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
++ E A+E+WN ++E G ++VL L ++G+L +V + +M+ +
Sbjct: 413 FRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPS 472
Query: 241 DVTMQKLK 248
+V+ +++K
Sbjct: 473 NVSFRRIK 480
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%)
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
FFD+M G PD ++YN + + K +++ +M + P ++ + I L
Sbjct: 250 FFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLG 309
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+P+ A ++ + E G P A+ N + RL D +EM+ + +
Sbjct: 310 LVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNAT 369
Query: 243 TMQKLKKAFY 252
T + FY
Sbjct: 370 TYNLFFRCFY 379
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA K F +M E P V Y + L + EAL MK + C
Sbjct: 273 GLCEAGRINEALKLFADMTED-NCCPT-VRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K N ++ M G L+P+++ YNA++ C +D+
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG--LIPSVVTYNALIDGYCKEGMIDDA 388
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D M + P++ TYN + L K +KVH+ ++M++ + P+ + + I
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
++ E A + + + ENG++P + + +V + L GR+ +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ V +A +M+ER + +P ++ Y + + + ++ A + L +M
Sbjct: 413 GLCKKRKVHKAMALLNKMLER-KLSPS-LITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D L K L+D + G N ++Y A++ C +D
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK--ANEVIYTALIDGYCKVGKIDVA 528
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M+ P+S TYN++ E L K KK+ E + +M+ +PT + I
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L + A++++N+++ G P + L + G L +V +M IL
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 38/275 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVL----------------AYETFLITLIRGKQ 44
G+ K GNVVEA + + + + +P+ AYE FLI +G Q
Sbjct: 203 GYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261
Query: 45 ------------------VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++EALK M +NC PT++ ++ + L + L
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ M G PN+ Y ++ LC N +D + +M G P +TYN + +
Sbjct: 322 FNEMKEKGCE--PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K + + M N P I L + A+ + N +LE + P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ N L+ G + L R ++N L+ D
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPD 473
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 4/245 (1%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
F++ P + Y T L++L + +DE + P + F+ ++ K+ +
Sbjct: 153 FKFKPT-LRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+V G L P+ Y +++ C N VDN + F M G + ++Y
Sbjct: 212 EAELYASKIVQAG--LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN 269
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L + +++E F +M ++ PT I L + A+ ++N + E G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
P + VL+ GL ++ + R+ EM + ++ VT L + E + D
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM-IDDA 388
Query: 262 FDSLE 266
F+ L+
Sbjct: 389 FEILD 393
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 8/249 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G VEA F EM E+ +V Y + L + ++DEA K L M + P++
Sbjct: 312 SGRKVEALNLFNEMKEK--GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ +D K ++ D+M PN YN ++ LC V
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCG--PNTRTYNELICGLCKKRKVHKAMALL 427
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M+ P +TYN + K + M +N P + I L
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IY 240
E A +++ + G+ E L+ G +G++ E MLN L Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547
Query: 241 DVTMQKLKK 249
+V ++ L K
Sbjct: 548 NVLIEGLCK 556
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 93/248 (37%), Gaps = 45/248 (18%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G A K F MV + P+ V Y FL ++E + M E P
Sbjct: 591 KDGAFDHALKVFNHMVS-LGYQPD-VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN-------- 115
L ++ +D +L + MV G P+L + + ++ L + N
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK--PSLYIVSILIKNLSHENRMKETRSE 706
Query: 116 ----DVDNV-----------------FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
V NV + F++MV HG D Y + + +++ E
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 766
Query: 155 VENFFHEMIKNEWQPTP------LNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ H M + P+ L+C + + + A+ + + ++ENG+LPL S
Sbjct: 767 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE------AVRLVDAMVENGLLPLLES 820
Query: 209 ANVLLVGL 216
+L+ GL
Sbjct: 821 YKLLVCGL 828
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + K++ EA + M PT+ ++ + ++K H +++++ MV
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+G+ P++ Y A + + ++ V +M G PD +TY ++ + +
Sbjct: 607 SLGYQ--PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 152 VHEVENFFHEMIKNEWQPT 170
H +F M+ +P+
Sbjct: 665 THRAFDFLKCMVDTGCKPS 683
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA K F V+R + P+ V+ Y + + ++DEA + L+ M E+
Sbjct: 129 GFCKVGKLDEALKIFDGAVKR-GFVPD-VVTYNALINGFCKADKLDEAQRILQRMVSESL 186
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN-NDVDN 119
P + +++ ++ L K N ++ ++V GF+ PN+I Y+ ++ LC +++
Sbjct: 187 VPDVVTYNSLVNGLCK-NGRVDEARM--LIVDKGFS--PNVITYSTLISGLCRELRRLES 241
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++MV +G PD ++YN + L + + V E F +++ ++P I
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
LL D A E+++ ++++G+ P + V + GL GR+ D ++M
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +E V EA K FG ++ R + PE V Y + L++ +V+EA + +
Sbjct: 267 GLAREQGVSEALKLFGSVL-RQGYEPE-VPTYNILIDGLLKEDRVNEAFELFSGLVKHGL 324
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K + + M G +P+++ +NAV+ LC VD
Sbjct: 325 EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG--CVPDVVSHNAVINGLCKEKRVDEA 382
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P+++++N + + K + F EM+K +PT + +
Sbjct: 383 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 442
Query: 181 LLDADEP---EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L A + + AI +++ ++E G +P + + L+ GL G+L D RR M
Sbjct: 443 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+++Y + L R + V EALK + + P + ++ +D L+K + +L+
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+V G L P+ I Y + LC V++ M G PD +++N + L K
Sbjct: 318 GLVKHG--LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+V E E M P ++ T I A + + A+ + +L+ G+ P +
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435
Query: 209 ANVLLVGL---RNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
N+L+ GL R GR+ + + M+ + ++ Y + L KA
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + MV E V+ Y + + L + +VDEA + L V KG +
Sbjct: 164 GFCKADKLDEAQRILQRMVS--ESLVPDVVTYNSLVNGLCKNGRVDEA-RMLIVDKGFS- 219
Query: 61 FPTLKFFSNALDILVK-LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S + L + L QL + MV G P+++ YNA++ L V
Sbjct: 220 -PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK--PDIVSYNALIHGLAREQGVSE 276
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F ++ G P+ TYN++ + L+K +V+E F ++K+ +P + I
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A E A+ + + E G +P S N ++ GL
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 35 FLITLIRGKQVDEALKFLR--VMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
L +L++ ++++A +F+ ++KG T + + L ++ D+ ++D M
Sbjct: 22 LLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQ---TVFDGMRK 78
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
GF PN I YNA++ LCN + + +++M+ G PD +TYN + K K+
Sbjct: 79 HGF--WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKL 136
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
E F +K + P + I AD+ + A I ++ ++P + N L
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196
Query: 213 LVGLRNLGRLSDVR 226
+ GL GR+ + R
Sbjct: 197 VNGLCKNGRVDEAR 210
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 7/231 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE V EA M E +P + +++ T + R + +A+ + M
Sbjct: 372 GLCKEKRVDEAEVLLSGM-EAKGCSP-NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429
Query: 61 FPTLKFFSNALDILVKLNDSTH---TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ ++ +D L K + L+D M+ G +P+++ Y+A++ L +
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR--VPDVVTYSALIDGLGKAGKL 487
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D+ R M G P+ TYN + L KV E F M++ P + T
Sbjct: 488 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI 547
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
I+ L + + A+ +++ LE G++P L+ GL + R+ + +
Sbjct: 548 ISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+ ++ +N + LC + + + FD M HG +P+ +TYN + L ++ + +
Sbjct: 47 LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQA 106
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ MIK + P + T + + + A++I++ ++ G +P + N L+ G
Sbjct: 107 LYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC 166
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+L + +R + M++ ++ VT L R
Sbjct: 167 KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGR 205
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHE-MIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD+ T ++ L+K+ K+ + F + ++K + N I+ L A A
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFN--IYISGLCRASRIGDAQT 71
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+++ + ++G P + N LL GL N GR+SD + E M+
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIK 113
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 6/248 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K+G + EA EM+ + F N + Y + L + ++ EAL M +
Sbjct: 426 GFCKKGQLEEAGLILREMLTKGFSLN---TVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F++ + L ++++ + L+ MV G ++ N + +N ++ ++
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG--VIANSVTFNTLIHAFLRRGEIQE 540
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + M+F G D +TYN + + L K V + F EMI+ P+ + C I
Sbjct: 541 ALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILIN 600
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
A + A+E ++ G P + N L+ GL GR+ + E++ I
Sbjct: 601 GFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQP 660
Query: 240 YDVTMQKL 247
+T L
Sbjct: 661 DSITYNTL 668
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 4/254 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA FGEM + P+ + + + + L R ++++AL R M E
Sbjct: 464 KHGKIHEALDMFGEMSSK-GCKPD-IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + ++ + ++L + M+ G L + I YN ++ LC V+
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL--DEITYNGLIKALCKTGAVEKGLGL 579
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M+ G P +T N++ KVH F +MI + P + + I L
Sbjct: 580 FEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+ ++ + GI P + N L+ L G D + + DVT
Sbjct: 640 RGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVT 699
Query: 244 MQKLKKAFYNESRS 257
L F +S S
Sbjct: 700 WNILVYNFGKQSNS 713
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 7/228 (3%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y+T + L + +VDEALK L M C P + F+ + +LN +L D
Sbjct: 246 MIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDR 305
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF PN + Y ++ LC +D ++ P+ + +N + ++N
Sbjct: 306 MILKGFT--PNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGFVRN 359
Query: 150 KKVHEVENF-FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+++E F + +MI N + P +T + L A+E+ N + G P +
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+L+ G G+L + EML + + V L A +
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+V+ + T + +R +++EA F+ M P + FS ++ L K ++L
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M G PNL Y ++ C ++ +M+ G +++ YN + L
Sbjct: 405 VNDMDAKGCK--PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K+ K+HE + F EM +P + I L DE E A+ ++ ++ G++
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ N L+ G + + + +ML R + ++T L KA
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 22 FEWNPEHVLAYETFLITLI----RGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVK 76
+ E ++ E+ I ++ R +A + L MKG C P+ + ++ LD+LV
Sbjct: 128 LQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVV 187
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
N + ++ M+ G + PN + V+ LC N+VDN M HG P+S
Sbjct: 188 GNCPSVASNVFYDMLSKGVS--PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNS 245
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ Y + + L K +V E EM P T I + ++ +
Sbjct: 246 MIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDR 305
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVR 226
++ G P + + L+ GL R+ + +
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRIDEAQ 335
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 15/255 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V+E K M+ + + P + Y + L + ++DEA L + G N
Sbjct: 289 GFCRLNRVLEGAKLVDRMILK-GFTPND-MTYGYLMHGLCKTCRIDEAQALLSKVPGPNV 346
Query: 61 --FPTL--KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
F TL F N +LN++T V +D M+ G+ +P++ ++ +V LC
Sbjct: 347 VHFNTLVNGFVRNG-----RLNEATAFV--YDKMINNGY--VPDVFTFSTLVNGLCKKGL 397
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ + M G P+ TY ++ + K ++ E EM+ + +
Sbjct: 398 FGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNA 457
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I+ L + A++++ + G P + N L+ GL + + D +M+
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG 517
Query: 237 ILIYDVTMQKLKKAF 251
++ VT L AF
Sbjct: 518 VIANSVTFNTLIHAF 532
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGEN 59
K G A + F EM++ + P+ TF I LIRG VDE F + M
Sbjct: 283 KRGRTSMAKQLFDEMLDTYGVTPDTY----TFNI-LIRGFCMNSMVDEGFWFFKEMSRFK 337
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ +D L + + MV NL PN++ Y ++ C D+
Sbjct: 338 CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAE 397
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAI 178
+MV G P+ +TYN + + L + +K+ +++ M+ + + P T I
Sbjct: 398 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 457
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ E A ++ + E + P A+ +VL+ L G F +E+ + IL
Sbjct: 458 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 517
Query: 239 IYDVTMQKLKKAF 251
++DV + L A+
Sbjct: 518 LHDVGCKPLVAAY 530
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 19/274 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ EA EMV R P + Y T + L +++D+ + L M G+
Sbjct: 388 GYCMKQDMAEALSLLAEMVSR-GLKPNKI-TYNTLIQGLCEAQKLDKIKEILEGMVGDGG 445
Query: 61 F----PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
F TL A + KL ++ +++ M + + P+ Y+ +V LC D
Sbjct: 446 FIPDTCTLNTLIKAHCTMGKLEEA---FSVFEKMSEL--RVQPDSATYSVLVRSLCQRGD 500
Query: 117 VDNVFRFFDQM-----VFH--GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
FFD++ + H G P YN +FE L N K + E F +++K Q
Sbjct: 501 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQD 560
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
P + T I PE ++ +L +P + +++ GL G +
Sbjct: 561 PP-SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSL 619
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
E+ML L + A + R +R D
Sbjct: 620 EKMLKSSHLPTTAIFHSILAALVEKERRIRQNID 653
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 10/246 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A M++ HV Y + L+ + ++A++ +R M NC
Sbjct: 138 GLCKEAKLDKAVSVLNGMIKSGCKPNAHV--YNALINGLVGASKFEDAVRVVREMGTTNC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL +S ++ L K+ L M+ G N P++I Y+ ++ LC + V+
Sbjct: 196 SPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLN--PSVITYSLLMKGLCLGHKVEMA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +Q+ G PD +N++ L K + +M N W P N T T+
Sbjct: 254 LQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDM--NRWNCAP-NLVTHNTL 310
Query: 181 L---LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ D+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I
Sbjct: 311 MEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKI 370
Query: 238 LIYDVT 243
+ +T
Sbjct: 371 VPTIIT 376
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E + Y + + ++++L L + + + +S ++ L K V +
Sbjct: 92 EDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSV 151
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M+ G PN +YNA++ L + ++ R +M P +TY+ + L
Sbjct: 152 LNGMIKSGCK--PNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGL 209
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ E + EM++ P+ + + + L + E A+++ N + G P
Sbjct: 210 CKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDV 269
Query: 207 ASANVLLVGLRNLGR 221
N+L+ GL ++G+
Sbjct: 270 QMHNILIHGLCSVGK 284
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL--DILVK-------LND 79
V ++ + L +VDE + L +MK F +++ ILV +N
Sbjct: 59 VASFNIMMRGLFDNGKVDEVISILELMKKSG------FIEDSITYGILVHGFCKNGYINK 112
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
S H +++ + G+ + Y+A++ LC +D + M+ G P++ Y
Sbjct: 113 SLHVLEIAERKGGV-----LDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVY 167
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N + L+ K + EM PT + +T I L + A ++ +LZ
Sbjct: 168 NALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZ 227
Query: 200 NGILPLEASANVLLVGL 216
G+ P + ++L+ GL
Sbjct: 228 KGLNPSVITYSLLMKGL 244
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGE 58
G K GN+VEA K + R + P V + Y T L + + EA+ M
Sbjct: 627 GLCKGGNLVEAKK----FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 682
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
N P +S+ L L + + V L+ +G G L PN +MY +V L
Sbjct: 683 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG-TLFPNHVMYTCLVDGLSKAGHPK 741
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F FF++M+ G PD++ +N I + + ++ + +FF M W N AT
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM---RWWGVCPNLATYN 798
Query: 179 TMLLDADEPEFA---IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+L + + + +++ ++ GI P + + + L++GL G + +M+
Sbjct: 799 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 858
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFD 263
L T L Y+ES MR FD
Sbjct: 859 GTLADQFTFNILINK-YSESGKMRKAFD 885
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 17/239 (7%)
Query: 4 KEGNVVEANKTF------GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
+ GNV EA K + G + F N + +L R ++ EA KFL M
Sbjct: 525 QHGNVTEAMKVYAVMNCNGHGADHFTCN--------VLVSSLCRDGKLGEAEKFLCHMSR 576
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ + D + +D M+ G + P+ Y +++ LC ++
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH--PSFFTYGSLLKGLCKGGNL 634
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+F +++ + DS+ YN + K+ +HE F +M++N P ++
Sbjct: 635 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694
Query: 178 ITMLLDADEPEFAIEIWNYILENGIL-PLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+T L + A+ ++ + G L P L+ GL G F EEM+ +
Sbjct: 695 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 753
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y F+ L + +A L+ M+ E P ++ ++ VK Q+++
Sbjct: 303 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 362
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+L PN + YNA++G C+ D + R D M G + +TY + L K
Sbjct: 363 EMSK--FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 420
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++K + M N+ + I L + A+++ + ++G+ P +
Sbjct: 421 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 480
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ L+ G +G + + M +++ + L
Sbjct: 481 YSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 519
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 98/254 (38%), Gaps = 4/254 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+ G +++AN F M R+ ++ Y L + + + L M E FP
Sbjct: 770 SRRGQMMKANDFFSTM--RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFP 827
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
F + + L K V+L M+ G + + +N ++ + + F
Sbjct: 828 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG--TLADQFTFNILINKYSESGKMRKAFD 885
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ M G FPD TYN IF L K E HEM++N P T I +
Sbjct: 886 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 945
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ + A ++ + + G E + + ++ GL + G+ D + ML R+L
Sbjct: 946 RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1005
Query: 243 TMQKLKKAFYNESR 256
T L F +++
Sbjct: 1006 TFTTLMHRFCRDAK 1019
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 4/246 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + A +TF E+V + P V L ++++ K+ + R M +
Sbjct: 173 YLKEGMIDYAVETF-ELVGLVGFKPS-VYTCNMILASMVKDKRTELVWSLFREMSDKGIC 230
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F+ ++ L + L M GF +P ++ YN ++ C
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF--VPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ G D TYN+ + L N + + +M K P + T I
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A +++N + + + P + N L+ G ++G + R + M + + +
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408
Query: 242 VTMQKL 247
VT L
Sbjct: 409 VTYGTL 414
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + EA K EM+E P+ V+ + + TL + +VDEA K MK
Sbjct: 513 YSKVGEIDEAIKLLSEMMEN-GCEPD-VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K ++L++ MV G PN I +N + LC N++V
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG--CPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M+ G PD TYN I L+KN +V E FFH+M K + P + T + +
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGV 687
Query: 182 LDADEPEFAIEIWNYILEN 200
+ A E A +I L N
Sbjct: 688 VKASLIEDAYKIITNFLYN 706
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN EA T M ++ H Y T + L+R ++D+AL+ M+ PT
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHT--YNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +D K DS ++ ++ M G + PN++ NA + L +
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKG--IAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F + G PDS+TYNM+ +C K ++ E EM++N +P + + I L
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
AD + A +++ + E + P + N LL GL G++ + E M+ +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + ++ L + + +D + L+ M+ P + F+ + +L + ++ M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G P+++ Y ++ LC +D F++M PD +TY + + N+
Sbjct: 285 DDEGCG--PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ V+ F+ EM K+ P + + L A A + + + + GILP + N
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 211 VLLVGLRNLGRLSDV 225
L+ GL + RL D
Sbjct: 403 TLICGLLRVHRLDDA 417
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGE 58
+ K G + E + + EM E N + + + L++ VD+AL + +M
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEAN---TITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+ PT + +D L K QL++ M+ G PN +YN ++ + D
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR--PNCAIYNILINGFGKAGEAD 943
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F +MV G PD TY+++ +CL +V E ++F E+ ++ P + I
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 179 TMLLDADEPEFAIEIWNYI-LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E A+ ++N + GI P + N L++ L G + + + E+
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ P L YN ++G L + ++ F Q+ G PD TYN + + K+ K+ E
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI-WNYILENGILPLEASANVLL 213
+ + EM +E + + I+ L+ A + A+++ ++ + + P + L+
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 214 VGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKA 250
GL GRL + ++ E ML+ IY++ + KA
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 5/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F M++ + P + Y + + + D A + M E
Sbjct: 900 GLSKSGRLYEAKQLFEGMLD-YGCRPNCAI-YNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P LK +S +D L + + + + G N P+++ YN ++ L ++ ++
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN--PDVVCYNLIINGLGKSHRLEEA 1015
Query: 121 FRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F++M G PD TYN + L V E ++E+ + +P I
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
+ +PE A ++ ++ G P
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSP 1100
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L++ + EA++ R M E P+L+ +S+ + L K D + L M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ + + +L ++ + +M G PD +TY ++ + L +
Sbjct: 250 ETLG--LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ + F +M +P + T + D + + + W+ + ++G +P +
Sbjct: 308 KLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ L G + + M ++ IL
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDE--ALKFLRVMKGENCFPTLKFF 67
+A + FG M E P AY + GK D AL+ MK + P +
Sbjct: 416 DALELFGNM-ESLGVKPT---AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +L L K Q++ + IG L+P+ + YN ++ ++D + +M
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ +G PD + N + L K +V E F M + + +PT + T + L +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 188 EFAIEIWNYILENGILPLEASANVL 212
+ AIE++ +++ G P + N L
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTL 614
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 4/218 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA + M + E V+ Y + L +++D A + MK P
Sbjct: 270 RAGKINEAYEILKRMDD--EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ LD D Q W M G +P+++ + +V LC + F
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH--VPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D M G P+ TYN + L++ ++ + F M +PT I
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
+ + A+E + + GI P + N L L GR
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 3/215 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW- 87
V Y L + ++DE + + M C + + LVK + + L+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D+M F+ P Y ++ L + + + F+ M+ +G P+ YN++
Sbjct: 880 DLMSDRDFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + F M+K +P + + L + + + + E+G+ P
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
N+++ GL RL + EM R + D+
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y T + T R +A K M+ + + F++ + ++ +S+ +L D
Sbjct: 325 VVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLD 384
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +G L P+ I Y ++ LC + +VD + F+ M+ H PD+++YN + L +
Sbjct: 385 QMTELG--LSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCR 442
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ +V E F +M E P L I L+ + A ++W+ +++ G
Sbjct: 443 SGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKG 495
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
LAY + + L++ +D A++ M+ + ++ + +LVK + ++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ +GF+L+P Y+ + LC + + M G PD +N+ + L +
Sbjct: 70 MMPMGFSLIP--FTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRE 127
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
KV F M++ +P ++ I L A + A+EIWN ++ +G+ P +
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 210 NVLLVGLRNLGRLS-DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+VGL + ++ AEE+ + R+ + V L F R
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGR 235
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GNV +A F +M+E E P+ + +Y + + L R +V EA+K MKG+ C P
Sbjct: 407 KSGNVDKAYGIFNDMIEH-EITPDAI-SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
F + L++ + ++WD M+ GF L
Sbjct: 465 ELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTL 498
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S ++ + +++ +L++ M G ++ N++ + +++ + + DQ
Sbjct: 328 YSTLIETFCRASNTKKAYKLFEEMRQKG--IVTNVVTFTSLIKAFLREGNSSVAKKLLDQ 385
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G PD + Y I + L K+ V + F++MI++E P ++ + I+ L +
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
AI+++ + P E + ++ GL +LS + ++M+++
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDK 494
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+++ Y+ ++ C ++ ++ F++M G + +T+ + + ++ +
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+M + P + T + L + + A I+N ++E+ I P S N L+ GL
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 220 GRLSDVRRFAEEM---------LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
GR+++ + E+M L + +I + +K A Y M D+ +L+R
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDR 500
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 97/261 (37%), Gaps = 17/261 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E V A +TF MV+R V++Y + L R +V +A++ M P
Sbjct: 126 RENKVGFAVQTFFCMVQR--GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG---IGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
K A LV V L MV + ++++YNA++ C ++
Sbjct: 184 NK----ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD +TYN++ N + E EM+++ Q + +
Sbjct: 240 EALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKR 299
Query: 181 LLDADEPEFAIEIWNYILE----NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
P+ ++++L+ G + S + L+ + EEM +
Sbjct: 300 HCRVSHPD---RCYSFMLKEMEPRGFCDV-VSYSTLIETFCRASNTKKAYKLFEEMRQKG 355
Query: 237 ILIYDVTMQKLKKAFYNESRS 257
I+ VT L KAF E S
Sbjct: 356 IVTNVVTFTSLIKAFLREGNS 376
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA + EM ER V+ Y T + + + +AL+ L M+ +
Sbjct: 322 GLCQAGKVDEAFRLKDEM-ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL + + L K + + + G L P++I YN ++ C +V
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG--LAPDVITYNTLIDAYCKAGNVAKA 438
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+MV G D+ T N + L K K+ + E H + + P ++ T +
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
PE A+ +W+ ++E ++P ++ N L+ GL + RL + E + + ++
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPD 558
Query: 241 DVTMQKLKKAFYNE 254
+ T + A+ E
Sbjct: 559 ETTYNIIIHAYCKE 572
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 93/226 (41%), Gaps = 2/226 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T + + + AL+ M P++ ++ + L ++ + +
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNE 549
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
V G L+P+ YN ++ C D++N FRF ++MV + PD +T N + L +
Sbjct: 550 FVEKG--LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ + F ++ + + T I + + + A+ ++ + G+ P +
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
NV+L L GR + ++ + L LK + +E+
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 37/249 (14%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
+L + +++EAL L + E P + ++ +D K + L D MVG G +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 98 ---------------------------------MPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+P+ + Y V+ + + R +
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
DQM+ P TYN + + L + +++ E + +E ++ P I
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIY 240
+ E A N ++EN P + N L+ GL G+L + E + + ++ Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 241 DVTMQKLKK 249
+ +Q + K
Sbjct: 633 NTLIQSMCK 641
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 68/181 (37%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L+ + L L + + L I L PN +N +V C+ + +
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
M G PD++TYN + + + E M ++ PT T ++
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ + G P + NVL +GL G++ + R +EM + D
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPD 348
Query: 242 V 242
V
Sbjct: 349 V 349
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA F M+ER P ++ Y + + Q+D AL MK P+
Sbjct: 147 KAGRVQEARSFFDAMLER-GLTP-NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ LD L +L+ M G G + P+ Y+ +V L + V+ +
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCS--PDSYTYSTLVNGLGKSGRVEEAHKV 262
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G D + YN + L K + V EM + + P + T + L
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A++P+ A E++ ++E+G P S N+L+ G + R+ EEM+
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA+K F EMV+R ++ Y + L TL + +D K ++ M +
Sbjct: 249 GLGKSGRVEEAHKVFREMVDR--GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ +D L K N +++ MV G P+LI YN ++ D
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK--PDLISYNILIDSYARFGDAAQA 364
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++MV G P++ TYN + L + +V E EM +P + + M
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDM 424
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L E + A ++ + + G+ P S V + GL
Sbjct: 425 LGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 36 LITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
L+ LI RG + +A + C PT+ F+ +DILV + ++ +V
Sbjct: 33 LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV 92
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G L + YN ++ + +D+ F +M G+ PD TY + L K +
Sbjct: 93 QKGCQL--DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEA 207
V E +FF M++ P N T +L+DA + + A+ ++ + G P
Sbjct: 151 VQEARSFFDAMLERGLTP---NIPT-YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVV 206
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N+LL L + GR+ R+ +M
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKM 231
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 4/232 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V A K F +M +P+ Y T + L + +V+EA K R M L
Sbjct: 219 GRVGAARKLFHKMTGD-GCSPDS-YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLV 276
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+++ L L K + +L M GF+ P+ +N ++ L N D F
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFH--PDAFSFNTIMDALGKANKPDAAREVFA 334
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G PD ++YN++ + + + EM++ + P + I L
Sbjct: 335 RMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDG 394
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A + + G P + N L+ L G R ++M ++ +
Sbjct: 395 QVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE +++A EM ER P + + T + ++D+AL+ M +
Sbjct: 375 GLCKERRLLDAEGLLNEMRER--GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D + + D LWD M + PN + Y+ ++ C V++
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS--REIFPNHVTYSILIDSHCEKGQVEDA 490
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+M+ G P+ +TYN I + ++ V + + F +M+ N+ P + T I
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ D+ A ++ N + + + P + N+L+ G G + + E+M + I
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA K + EM R P+ ++++ + R ++D A+ +LR M+
Sbjct: 270 GFCRVGEIEEALKIYKEMRHR-GIKPD-LVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + + +++ D MVG G +P+++ YN ++ LC + +
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG--CLPDVVTYNTLLNGLCKERRLLDA 385
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD T+ + K+ + F M+ +P + T I
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 445
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + A ++W+ + I P + ++L+ G++ D F +EM+N+ IL
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 505
Query: 241 DVTMQKLKKAF 251
+T + K +
Sbjct: 506 IMTYNSIIKGY 516
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Query: 47 EALKFLRV------MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+AL+F +V M+ FP + + +D + D+ + L D MV G L P
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG--LKPG 225
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ YN+V+ LC + D + F +M G PD ++ ++ + ++ E +
Sbjct: 226 IVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 285
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM +P ++ + I + + + A+ + G++P +++ G G
Sbjct: 286 EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 345
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+SD R +EM+ L VT L E R
Sbjct: 346 LMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN + +M R E P HV Y + + QV++A FL M +
Sbjct: 445 GMCRQGDLDKANDLWDDMHSR-EIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGI 502
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +++ + + + + + L +MV + P+LI YN ++ + + +
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN---KVSPDLITYNTLIHGYIKEDKMHD 559
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ + M PD +TYNM+ + V E F +M +P + I
Sbjct: 560 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 619
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
+ A + A ++ + +L+ G P
Sbjct: 620 GHVTAGNSKEAFQLHDEMLQRGFAP 644
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE +++A EM ER P + + T + ++D+AL+ M +
Sbjct: 60 GLCKERRLLDAEGLLNEMRER--GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 117
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D + + D LWD M + PN + Y+ ++ C V++
Sbjct: 118 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS--REIFPNHVTYSILIDSHCEKGQVEDA 175
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+M+ G P+ +TYN I + ++ V + + F +M+ N+ P + T I
Sbjct: 176 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ D+ A ++ N + + + P + N+L+ G G + + E+M + I
Sbjct: 236 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 292
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 4/244 (1%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
F P+ V+ Y + R + +AL+ M G C P + ++ L+ L K
Sbjct: 10 FGLVPDGVI-YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 68
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
L + M G + P+L + ++ C +D + FD M+ PD +TYN
Sbjct: 69 DAEGLLNEMRERG--VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + + + + + + + +M E P + + I + + E A + ++ G
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
ILP + N ++ G G +S ++F ++M+ ++ +T L + E + M D
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK-MHDA 245
Query: 262 FDSL 265
F L
Sbjct: 246 FKLL 249
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN + +M R E P HV Y + + QV++A FL M +
Sbjct: 130 GMCRQGDLDKANDLWDDMHSR-EIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGI 187
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +++ + + + + + L +MV + P+LI YN ++ + + +
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN---KVSPDLITYNTLIHGYIKEDKMHD 244
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ + M PD +TYNM+ + V E F +M +P + I
Sbjct: 245 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
+ A + A ++ + +L+ G P
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQRGFAP 329
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + E F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 147 GLCVEGKIGEVLHLFDKMIGEGFQPN---VVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN----------------------- 96
C P + +++ +D L K T L+ M+ G +
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263
Query: 97 ----------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+MPN+++++ VV LC V D M+ G P+ +TYN + +
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ E F M+ + P ++ +T I E A+ ++ + ++P
Sbjct: 324 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + L+ GL ++GRL D EM+ R
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTR 412
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V +A F EM+ + +P + Y + + L + L M P
Sbjct: 220 KDRQVTQAFNLFSEMIHQ-GISPS-IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D L K + D+M+ G PN++ YNA++ C +++D +
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE--PNVVTYNALMDGHCLRSEMDEAVKV 335
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV G PD ++Y+ + K +++ + F EM + E P + +T + L
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILI 239
+ AI +++ ++ G +P S +LL L RL + + + ++ I I
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERR 268
Y + + + +A E + RD F +L +
Sbjct: 456 YTIVIDGMCRA--GELEAARDLFSNLSSK 482
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 16/229 (6%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG ++ E L M GE P + + ++ L K+ ++ ++L M
Sbjct: 143 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ- 201
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N P++++Y +++ LC + V F F +M+ G P TYN + L +
Sbjct: 202 -GNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V +EM+ ++ P + +T + L + A ++ + +++ G+ P + N L+
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320
Query: 214 VG--LRN----LGRLSD---VRRFAEEMLNRRILIYD-VTMQKLKKAFY 252
G LR+ ++ D + FA ++++ LI +Q+++KA Y
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV R + P+ V +Y L L + +++DEA+ L+ ++G N
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQI-PDFV-SYCILLDYLCKNRRLDEAIALLKAIEGSNM 449
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D + + + L+ + G L PN+ Y ++ LC +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG--LHPNVWTYTIMINGLCQQGLLAEA 507
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M G P+ TYN+I ++N + EM+ + + M
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Query: 181 LLD 183
L D
Sbjct: 568 LSD 570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 22/254 (8%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + LI++ + K L M P + L+IL+ N H +
Sbjct: 65 PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY----TLNILI--NSFCHLQR 118
Query: 86 LWDIMVGIGFNLM---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
L G F+++ PN+ +N ++ LC + V FD+M+ G P+
Sbjct: 119 L-----GFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNV 173
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY + L K M + QP + + I L + A +++
Sbjct: 174 VTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSE 233
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++ GI P + N L+ L NL V EM+N +I+ V + A E +
Sbjct: 234 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 293
Query: 257 SM--RDRFDSLERR 268
M D D + +R
Sbjct: 294 VMEAHDVVDMMIKR 307
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 10/239 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + F EM E +P V+ Y + + L + K +D A++ L M +
Sbjct: 200 GLCRLGKIGEAKELFKEM-ETKACSPT-VVTYXSLIHGLCQSKDLDSAIRLLEEMASKGI 257
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D K S+ ++L D+MV +PN+I Y+ +V LC +
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVS--RRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G PD+ Y I K HE NF EM+ P L + + +
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 181 L------LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + P A +++ + GI + + L+ N G L +EM+
Sbjct: 376 HNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMV 434
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A++ R MK C P+ K + ILV N ++ + M +G + P++ N
Sbjct: 103 DAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMG--IPPSVASLNV 160
Query: 107 VVGLLC-NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ LC N+ +D R F +M G P S TY + L + K+ E + F EM
Sbjct: 161 LIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETK 220
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
PT + + I L + + + AI + + GI P + + L+ G G S
Sbjct: 221 ACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRA 280
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
+ M++RR L +T L E + +++ + L+R
Sbjct: 281 LELLDMMVSRRHLPNMITYSTLVHGLCKEGK-LQEAVEILDR 321
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
++++V CN D+ D+MV G PD T+N + +KV E E++
Sbjct: 410 FDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESA----ELV 465
Query: 164 KNEWQPTPLN 173
+ E T LN
Sbjct: 466 QVELMGTFLN 475
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + + ++ P V++Y T + IR +DE K M P
Sbjct: 154 KEGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDXANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K +++ + EM +P + T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLS 380
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M G + P++ Y+ ++ LC + +D
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASG--VXPDVYTYSVLINGLCKESKMDXAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 293 CKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + E F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 138 GLCVEGKIGEVLHLFDKMIGEGFQPN---VVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN----------------------- 96
C P + +++ +D L K T L+ M+ G +
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254
Query: 97 ----------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+MPN+++++ VV LC V D M+ G P+ +TYN + +
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ E F M+ + P ++ +T I E A+ ++ + ++P
Sbjct: 315 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + L+ GL ++GRL D EM+ R
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTR 403
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 10/269 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V +A F EM+ + +P + Y + + L + L M P
Sbjct: 211 KDRQVTQAFNLFSEMIHQ-GISPS-IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS +D L K + D+M+ G PN++ YNA++ C +++D +
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE--PNVVTYNALMDGHCLRSEMDEAVKV 326
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD MV G PD ++Y+ + K +++ + F EM + E P + +T + L
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILI 239
+ AI +++ ++ G +P S +LL L RL + + + ++ I I
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 446
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERR 268
Y + + + +A E + RD F +L +
Sbjct: 447 YTIVIDGMCRA--GELEAARDLFSNLSSK 473
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 16/229 (6%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG ++ E L M GE P + + ++ L K+ ++ ++L M
Sbjct: 134 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ- 192
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N P++++Y +++ LC + V F F +M+ G P TYN + L +
Sbjct: 193 -GNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V +EM+ ++ P + +T + L + A ++ + +++ G+ P + N L+
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311
Query: 214 VG--LRN----LGRLSD---VRRFAEEMLNRRILIYD-VTMQKLKKAFY 252
G LR+ ++ D + FA ++++ LI +Q+++KA Y
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV R + P+ V +Y L L + +++DEA+ L+ ++G N
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQI-PDFV-SYCILLDYLCKNRRLDEAIALLKAIEGSNM 440
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D + + + L+ + G L PN+ Y ++ LC +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG--LHPNVWTYTIMINGLCQQGLLAEA 498
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M G P+ TYN+I ++N + EM+ + + M
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Query: 181 LLD 183
L D
Sbjct: 559 LSD 561
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 22/254 (8%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + LI++ + K L M P + L+IL+ N H +
Sbjct: 56 PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY----TLNILI--NSFCHLQR 109
Query: 86 LWDIMVGIGFNLM---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
L G F+++ PN+ +N ++ LC + V FD+M+ G P+
Sbjct: 110 L-----GFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNV 164
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY + L K M + QP + + I L + A +++
Sbjct: 165 VTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSE 224
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++ GI P + N L+ L NL V EM+N +I+ V + A E +
Sbjct: 225 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 284
Query: 257 SM--RDRFDSLERR 268
M D D + +R
Sbjct: 285 VMEAHDVVDMMIKR 298
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP+LK + L LVK N+ + +++D + G ++P++ +++ ++ C + D+
Sbjct: 218 FPSLKTCTFLLSSLVKANELKKSYEVYDFICLGG--IIPDVHLFSTMINAFCKGHREDDA 275
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TYN I L K+ ++ E F +M+K + P+ + + I
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L+ ++ + A + + E G +P E N L+ G +G +S+ + ++ML++ I
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395
Query: 241 DVTMQKLKKAF 251
VT+ L + F
Sbjct: 396 SVTLNSLIQGF 406
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+E+ P +V+ Y + L + ++DEA +F M E P+L +S ++ L+KL
Sbjct: 282 MEKLGVAP-NVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLE 340
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ M +GF +PN ++YN ++ C ++ + D M+ G P+S+T
Sbjct: 341 KIDEANCVLKEMSELGF--VPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398
Query: 139 YNMIFECLIKNKKVHEVEN-----------------------------------FFHEMI 163
N + + K+ ++ + EN F EM+
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+P T ++ L A + A+E+W +L G +P ++N L+ GL G +
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQ 518
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ + +ML R ++ +T L E +
Sbjct: 519 ETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
AL F+R M N P + + L K V+LW ++G GF +PN++ NA+
Sbjct: 450 ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF--VPNIVTSNAL 507
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ LC ++ + M+ G D +TYN + K KV E EM+K
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI 567
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
QP + L +AD+ + A +W+ +NG +P + V++ G ++ +
Sbjct: 568 QPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGEN 627
Query: 228 FAEEMLNRRILIYDVTMQKLKKAF-----YNESRSMRDRFDS 264
E++++++ + V L +A+ N + +RD S
Sbjct: 628 LLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 111/293 (37%), Gaps = 41/293 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V E + EMV++ P+ + + L L ++DEA + K
Sbjct: 545 GCCKEGKVKEGFELKEEMVKK-GIQPD-IYTFNLLLHGLCNADKIDEASRLWHECKKNGY 602
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D K N L + +V L N ++YN+++ C N +++
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLEL--NSVVYNSLIRAYCINGNMNAA 660
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-- 178
FR D M G TY+ + L V + ++ EM K P + C T I
Sbjct: 661 FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV-CYTTIIG 719
Query: 179 ------------------------------TMLLDA----DEPEFAIEIWNYILENGILP 204
T+++D + + A ++ N + E GILP
Sbjct: 720 GYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP 779
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ N GL G++ + + +EM + + + ++T L + S +
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTA 832
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + E LK LR M ++ + K +L + MV G +
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG--IQ 568
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +N ++ LCN + +D R + + +G P+ TY ++ + K KV E EN
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL 628
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+E++ + + + + I A + + + G+L A+ + L+ GL N
Sbjct: 629 LNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCN 688
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
+G + D + +EM +L
Sbjct: 689 IGLVDDAKHLLDEMRKEGLL 708
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA + F +M +RF P+ + L + + D +F + M G PT+
Sbjct: 39 GMVEEAIQCFSKM-KRFRVFPK-TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVF 96
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + K D L++ M G L+P+ + YN+++ +D+ FF+
Sbjct: 97 TYNIMIDCMCKEGDVEAARGLFEEMKFRG--LIPDTVTYNSMIDGFGKVGRLDDTVCFFE 154
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TYN + C K K+ + FF EM +N +P ++ +T +
Sbjct: 155 EMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEG 214
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ AI+ + + G++P E + L+ +G LSD R A EML
Sbjct: 215 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQ 263
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 60/173 (34%), Gaps = 37/173 (21%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P F +L+ L +Q + M F + P N ++ D
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKR--FRVFPKTRSCNGLLHKFAKLGKTDG 78
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V RFF M+ GA P TYN++ +C+ K V F EM
Sbjct: 79 VKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM----------------- 121
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+F G++P + N ++ G +GRL D F EEM
Sbjct: 122 --------KF----------RGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 5/242 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
+ K GN+ +A + EM++ EWN V+ Y + L + E L L M +
Sbjct: 244 AYCKIGNLSDAFRLANEMLQVGVEWN---VVTYTALIDGLCGWENPTEGLHLLDEMVELD 300
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
T+ F +D L K + + + + F L N +Y A++ LC N V+
Sbjct: 301 IKVTVVTFCVLIDGLCKNKLVSKAIDYFG-RISNDFGLQANAAIYTAMIDGLCKGNQVEA 359
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+QM G PD Y + + K V E +M++ + L + +
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVW 419
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L ++ + A ++ GI P E +L LG +++ ++ ++L
Sbjct: 420 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLT 479
Query: 240 YD 241
D
Sbjct: 480 SD 481
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG+V A F EM +F + Y + + + ++D+ + F MK C P
Sbjct: 107 KEGDVEAARGLFEEM--KFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 164
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++ + M G L PN++ Y+ +V C + +F
Sbjct: 165 VITYNALINCFCKFGKLPKGLEFFREMKRNG--LKPNVVSYSTLVDAFCKEGMMQQAIKF 222
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ M G P+ TY + + K + + +EM++
Sbjct: 223 YVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQ 263
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M FE N ++ Y + +++ ALK M G C P ++ ++ + L K
Sbjct: 204 MSNGFEPN---IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ L+ MV G L PN++ Y A++ CN + FR M +G P+
Sbjct: 261 GKVERAMVLFSRMVEAG--LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
T++++ + L K +KV E + F ++K + + + I L + + A E+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ G +P S + L+ GL +LS E+M+ + I VT
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F M R Y L L+ V EA+ M+ ++C
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCL--RTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + + L + + GF PN+++YNA++ CN ++++
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE--PNIVVYNALIDGYCNAGEMEHA 231
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ M + P+ TY + L K+ KV F M++ +P + I
Sbjct: 232 LKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQG 291
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A + + + NG++P + + +VL+ L ++ + + F ++ + + +
Sbjct: 292 QCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVN 351
Query: 241 DVT--------------------MQKL-KKAFYNESRSMRDRFDSLERRWKTSQ 273
+V MQK+ + F ++ S D L R+ K SQ
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V A F MVE E N V+ Y + + A + L +M+
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPN---VVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P FS +D L K +V G + N ++Y +++ LC +D
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKV--NEVVYTSLIDGLCKTGKIDA 370
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M+ G PD+ +Y+ + + L + KK+ + +M++ Q +P+ I
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L+ E +I++ ++ GI P + V + GR+ D +M++R +
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 240 YDVTMQKLKKAFYN 253
VT L + + N
Sbjct: 491 NLVTYNTLIRGYAN 504
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G K G + A++ +M+ H +Y + + L R K++ +A L M KG
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAH--SYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ +D LV+ S +++D M+ G N P+++ Y V C ++
Sbjct: 419 QASPVT--YTIIIDELVREVGSEGPKKIFDKMIATGIN--PDIVTYTVFVRSYCEEGRME 474
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ QMV G FP+ +TYN + V + + F M+ W+P + +
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Query: 179 TMLLDADEPEFAIEIW 194
+++ + +++IW
Sbjct: 535 RLVVKKSSSDNSVDIW 550
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M FE N ++ Y + +++ ALK M G C P ++ ++ + L K
Sbjct: 204 MSNGFEPN---IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ L+ MV G L PN++ Y A++ CN + FR M +G P+
Sbjct: 261 GKVERAMVLFSRMVEAG--LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
T++++ + L K +KV E + F ++K + + + I L + + A E+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ G +P S + L+ GL +LS E+M+ + I VT
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F M R Y L L+ V EA+ M+ ++C
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRT--AFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + + L + + GF PN+++YNA++ CN ++++
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE--PNIVVYNALIDGYCNAGEMEHA 231
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ M + P+ TY + L K+ KV F M++ +P + I
Sbjct: 232 LKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQG 291
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A + + + NG++P + + +VL+ L ++ + + F ++ + + +
Sbjct: 292 QCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVN 351
Query: 241 DVT--------------------MQKL-KKAFYNESRSMRDRFDSLERRWKTSQ 273
+V MQK+ + F ++ S D L R+ K SQ
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V A F MVE E N V+ Y + + A + L +M+
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPN---VVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P FS +D L K +V G + N ++Y +++ LC +D
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKV--NEVVYTSLIDGLCKTGKIDA 370
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M+ G PD+ +Y+ + + L + KK+ + +M++ Q +P+ I
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L+ E +I++ ++ GI P + V + GR+ D +M++R +
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 240 YDVTMQKLKKAFYN 253
VT L + + N
Sbjct: 491 NLVTYNTLIRGYAN 504
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G K G + A++ +M+ H +Y + + L R K++ +A L M KG
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAH--SYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ +D LV+ S +++D M+ G N P+++ Y V C ++
Sbjct: 419 QASPVT--YTIIIDELVREVGSEGPKKIFDKMIATGIN--PDIVTYTVFVRSYCEEGRME 474
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ QMV G FP+ +TYN + V + + F M+ W+P + +
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Query: 179 TMLLDADEPEFAIEIWN 195
+++ + +++IW
Sbjct: 535 RLVVKKSSSDNSVDIWK 551
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y F+ L R +++EA F M+ N P+ +++ +D +L T + L D M
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMT 636
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+ +P+L Y ++ LC + F ++ + D + + ++ L++
Sbjct: 637 KSGY--LPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGS 694
Query: 152 VHEVENFFHEMIKNEWQPT 170
V E + M ++ +QP+
Sbjct: 695 VAEFSSLLSVMKEHGYQPS 713
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ----VDEALKFLRVMKG 57
+ +EG + +A +MV+R + +++ Y T LIRG V +A VM G
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVF--PNLVTYNT----LIRGYANLGLVSQAFSTFEVMVG 520
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI----------MYNAV 107
+ P ++ L ++VK + S ++V +W I ++ I +Y+
Sbjct: 521 KGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCF 580
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ LC + ++ FF M P Y I +C + K + + M K+ +
Sbjct: 581 IRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGY 640
Query: 168 QP 169
P
Sbjct: 641 LP 642
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A+ +++ R Q+ +ALK L +M+ P L + +D+ V+ N ++ + M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G ++PN++ YN ++ C+ + V+ + M G PD ++Y I L K K
Sbjct: 304 QVVG--IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 151 KVHEVENFFHEMIKNEW-QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ EV + +M K P + T I ML D + A+ E G +
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++ L GR+S+ + EML++ DV
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE +VE +M + P+ V Y T + L + DEAL FL+ + E F
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQV-TYNTLIHMLTKHDHADEALWFLKDAQ-EKGFRI 416
Query: 64 LKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
K +S + L K + L + M+ G + P+++ Y AVV C +VD +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKG-HCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M HG P++++Y + + + K E + ++ W P + + + L
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 535
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ A ++ ++ G P N+LL L GR + R+F EE LN+ I
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA EM+ + P+ V+ Y + R +VD+A K L+VM P
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPD-VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L+ + + S ++ ++ ++ PN I Y+ ++ L +
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS--PNSITYSVIMHGLRREGKLSEACDV 546
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+MV G FP + N++ + L ++ + HE F E + +N T I
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 184 ADEPEFAIEIWN--YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
DE + A+ + + Y++ + V +G + GR+++ ++ML++ I
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK--GRIAEATELMKKMLHKGIDPTP 664
Query: 242 VT 243
VT
Sbjct: 665 VT 666
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 4/178 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G +EA + M E W+P + Y + L R ++ EA +R M +
Sbjct: 498 GMCRTGKSLEAREMMN-MSEEHWWSPNSI-TYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + L L + + + + + G + N++ + V+ C N+++D
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI--NVVNFTTVIHGFCQNDELDAA 613
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D M D TY + + L K ++ E +M+ PTP+ T I
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE +++A EM ER P + + T + ++D+AL+ M +
Sbjct: 314 GLCKERRLLDAEGLLNEMRER--GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D + + D LWD M + PN + Y+ ++ C V++
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS--REIFPNHVTYSILIDSHCEKGQVEDA 429
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+M+ G P+ +TYN I + ++ V + + F +M+ N+ P + T I
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ D+ A ++ N + + + P + N+L+ G G + + E+M + I
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA K + EM R P+ ++++ + R ++D A+ +LR M+
Sbjct: 209 GFCRVGEIEEALKIYKEMRHR-GIKPD-LVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + + +++ D MVG G +P+++ YN ++ LC + +
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG--CLPDVVTYNTLLNGLCKERRLLDA 324
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD T+ + K+ + F M+ +P + T I
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + A ++W+ + I P + ++L+ G++ D F +EM+N+ IL
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 444
Query: 241 DVTMQKLKKAF 251
+T + K +
Sbjct: 445 IMTYNSIIKGY 455
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN + +M R E P HV Y + + QV++A FL M +
Sbjct: 384 GMCRQGDLDKANDLWDDMHSR-EIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGI 441
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +++ + + + + + L +MV + P+LI YN ++ + + +
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN---KVSPDLITYNTLIHGYIKEDKMHD 498
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ + M PD +TYNM+ + V E F +M +P + I
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 558
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ A + A ++ + +L+ G A+ V V ++N
Sbjct: 559 GHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQN 597
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Query: 47 EALKFLRV------MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+AL+F +V M+ FP + + +D + D+ + L D MV G L P
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG--LKPG 164
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ YN+V+ LC + D + F +M G PD ++ ++ + ++ E +
Sbjct: 165 IVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 224
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM +P ++ + I + + + A+ + G++P +++ G G
Sbjct: 225 EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 284
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+SD R +EM+ L VT L E R
Sbjct: 285 LMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK-LNDSTHTVQLWD 88
L Y T + R +++D A + L MK + P + + DIL+ L + + D
Sbjct: 293 LTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTY----DILIAGLCRAKRLSEARD 348
Query: 89 IMVGIGF--NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ + + PN++ YN ++ V++ ++ F +MV G PD +TY+ + L
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ E ++ EM+ + P ++ I+ L A E + A +++ ++ NG P
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A N L+ GL GRL D + +EM R
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTER 497
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + + EA G + + P +V++Y T + + +V++A + M
Sbjct: 336 GLCRAKRLSEARDLLGTLRNEDDCTP-NVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQ 394
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L ++ + MVG ++P + +Y++V+ LC ++D
Sbjct: 395 HPDVVTYSTLIRGLCNAGRASEAHSYLEEMVG--KKILPKVPVYSSVISGLCRAGELDAA 452
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD MV +G P+ YN + L K ++ + + EM + P + T I
Sbjct: 453 STVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVG 512
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
L + A +++ LE GI E S NV++ LR L + V R
Sbjct: 513 LCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLR 559
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 7/258 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V +A + F EMV + +P+ V+ Y T + L + EA +L M G+
Sbjct: 372 GFSKAARVNDAYQLFLEMVTAGQ-HPD-VVTYSTLIRGLCNAGRASEAHSYLEEMVGKKI 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + L + + ++D MV G PNL +YN+++ LC + +
Sbjct: 430 LPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQ--PNLAVYNSLIYGLCKTGRLCDA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G PD +TY + L + + E + + ++ + + +C I
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L ++ + + + +L G P ++ L L++ R+ E+M+ I
Sbjct: 548 LRCLEQAQRVLRV---VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPD 604
Query: 241 DVTMQKLKKAFYNESRSM 258
T+ L A + +++
Sbjct: 605 GSTVDALVGAMCRQDKAV 622
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ +V EA + L+ M PTL +++ + K D L + M
Sbjct: 229 YTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMK 284
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+ + + YN ++ C ++D + ++M + PD TY+++ L + K+
Sbjct: 285 RKGYQ--GDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
Query: 152 VHEVENFFHEMIKNEWQPTP--LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E + + +NE TP ++ T I A A +++ ++ G P +
Sbjct: 343 LSEARDLLGTL-RNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTY 401
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDRFDSL 265
+ L+ GL N GR S+ + EEM+ ++IL +Y + L +A E + FDS+
Sbjct: 402 STLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA--GELDAASTVFDSM 459
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 105/301 (34%), Gaps = 74/301 (24%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL----------- 49
G K G + +A EM ER +P+ V Y T ++ L R + DEA
Sbjct: 477 GLCKTGRLCDAKLRVKEMTER-GCSPDGV-TYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534
Query: 50 ---------------------KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ LRV+ PT F++ ++ L K N+ QL +
Sbjct: 535 EISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLE 594
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+G G P+ +A+VG +C + F ++MV G+ P TY+ + L K
Sbjct: 595 DMIGAGIK--PDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFK 652
Query: 149 NKK------------------------------------VHEVENFFHEMIKNEWQPTPL 172
K V E N E+ K++W +
Sbjct: 653 AGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQEL-KSKWGIQSI 711
Query: 173 NCA-TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
T + L + E+ + N + EA+ N+L+ G LG+ R E
Sbjct: 712 VAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE 771
Query: 232 M 232
M
Sbjct: 772 M 772
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN L + +R F + PDS+TY ++ L K+ + + EM+
Sbjct: 93 YNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMV 152
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+P L C + L + E A+ Y + +P A+ +L+ GL R+
Sbjct: 153 DRGLRPVVLTCKFLLNALCKSGNLELAL---RYFEKMSSIPCAATWTILIDGLFRAIRVD 209
Query: 224 DVRRFAEEMLNRRIL---IYDVTMQKLKKA 250
+ + EEM + I Y V + L KA
Sbjct: 210 EACYYFEEMKHTAIPNNWTYTVVINGLVKA 239
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L+P+ I Y ++ LCN + +++MV G P LT + L K+ +
Sbjct: 121 LIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELAL 180
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE---NGILPLEASANVLL 213
+F +M + + CA T+L+D ++ Y E + +P + V++
Sbjct: 181 RYFEKM-------SSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVI 233
Query: 214 VGLRNLGRLSDVRRFAEEM 232
GL G++++ R +EM
Sbjct: 234 NGLVKAGKVAEAERVLQEM 252
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L + +A + LR M P + FF+ +D VK + L+
Sbjct: 744 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 803
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M I +++PN+ YN+++ C + + + FD MV G FPD +TYN + K
Sbjct: 804 EM--IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 861
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+K+V + F EM T I A + A +++N +++ G+ P +
Sbjct: 862 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 921
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
N+LL L N G++ E++ ++ I+ Y++ +Q L +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 967
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 8/246 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN++EA + EM+ R P +V Y + + + +A +M + CFP
Sbjct: 791 KEGNLLEARNLYKEMIRR-SVVP-NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 848
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ + YN ++ C ++ +
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQG--LVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G PD +TYN++ +CL N K+ + ++ K+E + I L
Sbjct: 907 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL--RNLGRLSD--VRRFAEEMLNRRILI 239
D+ + A ++ + G+ P + ++ GL + L R +D RR E+ I
Sbjct: 967 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026
Query: 240 YDVTMQ 245
YD T++
Sbjct: 1027 YDETLR 1032
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 22/248 (8%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T L L + +A + LR M + P + F+ +D+ VK + +L+
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + PN + YN+++ LC + + + + FD M G FP+ +TYN + K
Sbjct: 271 EMIQSSVD--PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ V E F M + T I + A++I+ +++ + P +
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 209 ANVLLVGLRNLGRLS------DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+LL GL G + D R +E+ + I+ Y++ + L KA
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIG--IVAYNIMIHGLCKA------------ 434
Query: 263 DSLERRWK 270
D +E+ W+
Sbjct: 435 DKVEKAWE 442
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ + L+ + N V L D M G GF +PN+++YN V+ LC N D++N
Sbjct: 672 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF--VPNVVIYNTVINGLCKNRDLNNAL 729
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F M G D++TYN + L + + + +M+K + P + I
Sbjct: 730 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ ++ ++P + N L+ G G L D + + M+++
Sbjct: 790 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849
Query: 242 VTMQKLKKAFYNESR 256
VT L F R
Sbjct: 850 VTYNTLITGFCKSKR 864
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 3/229 (1%)
Query: 24 WNPEHVLAYETFLI-TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
+ H L T LI R ++ AL L M P++ F + L +N
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
L +MV G+ PN+++YN ++ LC N +++ ++M G D +TYN +
Sbjct: 160 AFSLVILMVKSGYE--PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L + + + +M+K P + I + + + A E++ ++++ +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
P + N ++ GL GRL D ++ + M ++ VT L F
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 8/232 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN+ EA + + EM++ +P +V Y + + L ++ +A K +M + CFP
Sbjct: 258 KQGNLDEAQELYKEMIQS-SVDPNNV-TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M GFN ++ YN ++ C +
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN--ADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F MV PD +T+ ++ L N ++ F +M ++E + I L
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
AD+ E A E++ + G+ P + ++++GL G RR A+E++ R
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP----RREADELIRR 481
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 2/194 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+ D+A M P++ F+ L ++ K+N + L+ M +G + +L
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS--HDLYS 641
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+ ++ C + + +M+ G P +T + + + E + M
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ P + T I L + A+E++ + + GI + N L+ GL N GR +
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761
Query: 224 DVRRFAEEMLNRRI 237
D R +M+ R+I
Sbjct: 762 DAARLLRDMVKRKI 775
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + +L + ++ C + + +M+ G P +T+ + ++ +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ M+K+ ++P + T I L E A+E+ N + + G+ + N LL
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
GL GR SD R +M+ R I VT L F +
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 22/280 (7%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK-GE 58
GW K G A EM V+ E N V+ Y L + R + +F R ++ E
Sbjct: 209 GWCKIGRFKTALSFLNEMKVKGVEPN---VVTYNVILNGICRKASLHPEERFERTIRDAE 265
Query: 59 NCF---------PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG 109
F P + FS L + + + + +M G + PN++ Y +V+
Sbjct: 266 KVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKG--ICPNVVTYTSVIK 323
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQ 168
LC+ ++ D+MV +G P + TYN F+ K + FF +M ++ +
Sbjct: 324 CLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCE 383
Query: 169 PTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
PT I M L AD EIWN ++E+G+ P S VL+ GL + + ++
Sbjct: 384 PTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQY 443
Query: 229 AEEMLNRRILIYDVTMQKLKKAFYNES-----RSMRDRFD 263
EM+ + L VT + L + R ++ R D
Sbjct: 444 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLD 483
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 17/214 (7%)
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T F+ LD L K H +L++ + ++ MY ++ C
Sbjct: 165 TSDHFTYLLDTLCKYGYVKHACELFNRNSN---RFVADVKMYTVLIYGWCKIGRFKTALS 221
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF----------FHEMIKNEWQPTPL 172
F ++M G P+ +TYN+I + + +H E F F EM ++ +P
Sbjct: 222 FLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVT 281
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + + + A +P+ ++ + E GI P + ++ L + GR+ + +EM
Sbjct: 282 SFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEM 341
Query: 233 LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLE 266
+ + T F+ E R +D +L+
Sbjct: 342 VRNGVSPCAATYN----CFFKEYRGRKDADKALK 371
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS-------------NALDILV 75
V+ Y T + L + ++ EA + L MK C P + +S NA +L
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFP 134
++ DS H PN++ YN ++ LC + +D +QM G
Sbjct: 247 QMRDSDHD---------------PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ + Y+ + + L K + E + M + +P + ++ + L A + E A+E
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ G P + L+ GL + GRL++ R EEM
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G EA E + R P+ V+ Y + + L + +++EA++ +R M E C
Sbjct: 302 GLCKLGRTQEARSVM-EAMARAGCRPD-VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + + L +L ++ V+ G G + P++ YNA++G LC +
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRI 419
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
D+ +FF +M G PD ++Y+ I E L ++ +
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 50 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG 109
+ L M P + ++ L+ L KL +L M+ G P+L+ Y+ ++
Sbjct: 31 RLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLS 90
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C V+ +++ G PD+L Y + L K+ ++ E EMI+ P
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T + T I+ E A + + +G+ + N L+ GL GRL + +
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 230 EEM 232
E M
Sbjct: 211 ERM 213
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 45/222 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
G K G V+ A++ +M R + +V+ Y T L L + ++D AL+ + M +
Sbjct: 231 GLCKSGKVLNAHQVLEQM--RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C + +S +D L KL + + + M G P+++ Y+++V LC ++
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR--PDVVTYSSLVNGLCKAGKIEE 346
Query: 120 VFRFFDQMVFHGAFPDSLTY---------------------------------------- 139
+M G P+++TY
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
N + L K ++ + FF M P ++ +T + L
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + +NA+V + R + M G P+ ++YN + E L K ++ HE E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 159 FHEMIKNEWQPTP--LNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+MI + TP + +T ++ A + E + E+ ++ G+ P
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 106/256 (41%), Gaps = 10/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G+ K+G + + M R P +V++Y L L + ++ EA + +R M +G
Sbjct: 19 GFSKQGRPGDCERLLETMAARG-IQP-NVVSYNGLLEGLCKLERWHEAEELVRDMISRGG 76
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P L +S L K + +L ++ G L P+ +MY V+ LC + +
Sbjct: 77 RSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG--LRPDALMYTKVMASLCKSARLG 134
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
++M+ G P +T+N + + K + ++ M + + + T +
Sbjct: 135 EALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLM 194
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR--- 235
L A + A ++ + +G P + + + GL G++ + + E+M +
Sbjct: 195 DGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHD 254
Query: 236 -RILIYDVTMQKLKKA 250
++ Y+ + L K+
Sbjct: 255 PNVVTYNTILDGLCKS 270
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 8/229 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y L +R Q+ + L +M E C+P + F++ + K D ++ +L+
Sbjct: 314 VVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFK 373
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNND------VDNVFRFFDQMVFHGAFPDSLTYNMI 142
M+ G P ++YN +G +C+N + +D V + + +M+ G + + +
Sbjct: 374 KMIKCG--CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
CL K + EM+ + P + I L DA + E A ++ + NGI
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGI 491
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+P + +L+ G + R++ +EML++ VT L A+
Sbjct: 492 VPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAY 540
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 20/265 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EM+ + +V+ Y + ++ KQ+ A + +M E C P
Sbjct: 507 KAGLIQQARKWFDEMLHK--GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN 564
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLM-------------PNLIMYNAVVG 109
+ ++ +D K Q++ M G I + M PN+I Y A+V
Sbjct: 565 VVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVD 624
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC N V D M+ HG P+ + Y+ + + K K+ + + F +M + + P
Sbjct: 625 GLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSP 684
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF- 228
++ I L + + +++ + +LEN P ++ GL +G+ + +
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM 744
Query: 229 ---AEEMLNRRILIYDVTMQKLKKA 250
E+ N ++ Y + K+
Sbjct: 745 LKMEEKGCNPNVVTYTAMIDGFGKS 769
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + +A + F +M ER ++P ++ Y +F+ L + ++D LK L M +C
Sbjct: 660 GFCKIGKLQDAQEVFTKMSER-GYSP-NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSC 717
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L M G N PN++ Y A++ + ++
Sbjct: 718 TPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN--PNVVTYTAMIDGFGKSGKIEQC 775
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G P+ +TY ++ N + E EM + W L +
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHIL----SHRK 831
Query: 181 LLDADEPEF--AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+++ EF +I + + + EN +P+++ +L+ GRL EE+
Sbjct: 832 IIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+G GF +P+ Y+ V+G LC+ + V+ F F++M +G P TY ++ + K
Sbjct: 451 MMGKGF--VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKA 508
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F EM+ P + I L A + A E++ +L G P +
Sbjct: 509 GLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTY 568
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G++ + M
Sbjct: 569 TALIDGHCKAGQIEKACQIYARM 591
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 18/230 (7%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE---------------NC-FPTLK 65
E +V+ Y + + Q+++A + M+G+ NC P +
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVI 617
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ +D L K N +L D M+ G PN I+Y+AV+ C + + F
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLAHGCE--PNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P+ TY+ +CL K+ ++ V +M++N P + + L
Sbjct: 676 KMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIG 735
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A ++ + E G P + ++ G G++ +M ++
Sbjct: 736 KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSK 785
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 2/160 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
F L + D+A K + M G+ P +S + L + L++ M G
Sbjct: 431 FARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNG 490
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++P++ Y ++ C + ++FD+M+ G P+ +TY + +K K++
Sbjct: 491 --IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPV 548
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ F M+ +P + I A + E A +I+
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EMV+R +P ++ Y + + ++DEA + M ++CFP
Sbjct: 338 KEGKLVEAEKLYDEMVKR-SIDPS-IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S + K ++L+ M G L+ N + Y ++ L D D
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRG--LVGNTVTYTTLIQGLFQAGDCDMAQEI 453
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G P+ +TYN + + L KN K+ + F + +++ +PT I +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E +++ + G+ P + N ++ G G + +EM
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M P + FS +D VK +L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D MV + P+++ Y++++ C ++ +D + F+ MV FPD ++Y+ + +
Sbjct: 350 DEMVKRSID--PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+V E F EM + + T I L A + + A EI+ ++ +G+ P
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
+ N LL GL G+L E + + I Y++ ++ + KA
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL K++ EA+ + M P F+ + L N ++
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G P+L+ Y VV LC D D F ++M P L Y I
Sbjct: 205 AVALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L KNK + + N F EM +P + ++ I+ L + A + + ++E I
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + + L+ G+L + + +EM+ R I VT L F M DR
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF-----CMHDRL 377
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 378 DEAKQMFE 385
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ P + Y + R Q+ AL L M P + S+ L+
Sbjct: 102 SLGEQMQNLGM-PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V L D M G+ PN + +N ++ L +N D+MV G
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQ--PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQ 218
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY ++ L K ++M + + +P L T I L + A+ +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNL 278
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + GI P + + L+ L N GR SD R +M+ R+I T L AF
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 254 ESR 256
E +
Sbjct: 339 EGK 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 93/225 (41%), Gaps = 2/225 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + D A L M+ P + ++ +D L K + L+
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFK 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN++ Y++++ LCN + R M+ PD T++ + + +K
Sbjct: 281 EMETKG--IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E + EM+K P+ + ++ I D + A +++ +++ P S
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ L+ G R+ + EM R ++ VT L + +
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 3/233 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P V + T + L + EA+ + M + C P L + ++ L K D+
Sbjct: 182 YQPNTV-TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
L + M L P +++Y ++ LC N +D+ F +M G P+ +TY+ +
Sbjct: 241 FILLNKMEQ--GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
CL + + +MI+ + P + I + + A ++++ +++ I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + L+ G RL + ++ E M+++ V+ L K F R
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y T L L R K D L M E C P + ++ + + ND +++L++
Sbjct: 67 VHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFN 126
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M +G P+ + Y ++ L D + QM G PD+ TY++I CL K
Sbjct: 127 VMQMVGCE--PDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGK 184
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K++ F EM + P+ + I + A + + A+++++ + E G P +
Sbjct: 185 AGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVT 244
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
+++ L N G + D + EEM
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFEEM 268
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 82/235 (34%), Gaps = 35/235 (14%)
Query: 12 NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
N EM+ E +V+ Y + R +D +LK VM+ C P + +
Sbjct: 87 NNLLDEMIR--EGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLI 144
Query: 72 DILVKLNDSTHTVQLWDIMVGIGF---------------------------------NLM 98
D+ K ++L+ M GF
Sbjct: 145 DLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L+ YN ++ L D + + + G PD +TY +I E L + + E
Sbjct: 205 PSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQV 264
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F EM + W + M E A + +N +L++G+ P + N LL
Sbjct: 265 FEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLL 319
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 19/196 (9%)
Query: 74 LVKLNDSTHTVQLWDIM-----VGIGFNLM----------PNLIMYNAVVGLLCNNNDVD 118
L LN S + Q+ +I+ G+ +N ++ Y ++G+L D
Sbjct: 25 LAGLNASLNAYQVNEILKQQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFD 84
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ D+M+ G P+ +TYN + C + + F+ M +P + T I
Sbjct: 85 VLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLI 144
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR--- 235
+ A + A+E++ + G P + ++++ L G+L+ + EM +R
Sbjct: 145 DLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 236 -RILIYDVTMQKLKKA 250
++ Y++ + KA
Sbjct: 205 PSLVTYNIIIDLHAKA 220
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 7/244 (2%)
Query: 19 VERFEWNPEHVL-----AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+E F PE Y T + L + +++DEA+ L M+ E C P+ ++ +D
Sbjct: 207 IEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L K D + +L D M G PN + YN ++ LC +D ++MV
Sbjct: 267 LCKKGDLSRVTKLVDNMFLKG--CFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+ +TY + L+K ++ + M + ++ + I+ L + E A+ +
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTL 384
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
W + E G P + ++ GL G+ ++ + M++ L T L K F+
Sbjct: 385 WKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFK 444
Query: 254 ESRS 257
S
Sbjct: 445 TGLS 448
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 7/234 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L++ + L + VD A++ R M + C P + +D L K V L D
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G + P+ ++YN ++ LC D+ V + D M G FP+ +TYN + L
Sbjct: 248 MQSEGCS--PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLK 305
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ + + M+ ++ P + T I L+ + + E G +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365
Query: 210 NVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKL-KKAFYNESRSM 258
+VL+ GL G+ + ++ AE+ I++Y + L ++ NE++ +
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG--IGFNLMPNLIMYNAVV 108
F R++ C ++K F++ L++++ ++ +D +V + N+ PN + +N V+
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194
Query: 109 GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
LC VD F M PD TY + + L K +++ E EM
Sbjct: 195 KALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254
Query: 169 PTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
P+P+ I L + ++ + + G P E + N L+ GL G+L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 229 AEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
E M++ + + DVT L + R+M
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRAM 344
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG EA + +M E+ P +++ Y + L R + +EA + L M C
Sbjct: 371 GLFKEGKAEEAMTLWKKMAEK-GCRP-NIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ + K S +Q+W M G + N Y+ ++ LC V
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSR--NEFCYSVLIDGLCGVGRVKEA 486
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M+ G PD++ Y+ + + L + +HEM+ E +P +
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQE-EPKSQPDVVTYNI 545
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG-RLSDVRRFAEEMLNR 235
LLD + A+++ N +L+ G P + N L L + R F EE++ R
Sbjct: 546 LLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVAR 605
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G++ K M + + E + Y T + L ++D+A+ L M C
Sbjct: 266 GLCKKGDLSRVTKLVDNMFLKGCFPNE--VTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LVK + +L M G+ L N +Y+ ++ L +
Sbjct: 324 IPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL--NQHIYSVLISGLFKEGKAEEA 381
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G P+ + Y+ + + L + K +E + + MI + P ++ +
Sbjct: 382 MTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKG 441
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E AI++W + E G E +VL+ GL +GR+ + +ML
Sbjct: 442 FFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A + F +MV + +P+ V+ + + + L ++++AL+ L + C PT
Sbjct: 334 KMGRLDDAYELFQQMVAN-KLSPD-VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D K N +L GF +PN + YN +V C D ++
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGF--VPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 124 FDQMVFHGA-FPDSLT-YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
DQ+ G P S+ Y +I + L ++ + + F+ EMI+ + P AT + L
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A +P+ A E+ +++ G P + + ++ G + A E+
Sbjct: 510 CKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 12/227 (5%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKF 66
V +A + EM+ R + + Y + L + +++DEA+ L F P +
Sbjct: 200 VDDARELVEEMLHR--GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT 257
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S +D L K V +++ M + P I YN+++G C D+D R +
Sbjct: 258 YSTVIDGLCKAGRLRDAVDIFEEM-----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGK 312
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV PD +TY + K ++ + F +M+ N+ P + + + L
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
E A+E+ I G P + N ++ G S+ R AEE++
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCK----SNQVRKAEELV 415
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 8/234 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
NP +L + + L R ++ AL R M + P ++ + L K
Sbjct: 111 MNPGTLL-HNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDA 168
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
VQ+ MV +P+ VV LC + VD+ ++M+ G +++TY+ +
Sbjct: 169 VQVLQEMVSA--RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALV 226
Query: 144 ECLIKNKKVHE-VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K +++ E V E+ + + P + +T I L A A++I+ E
Sbjct: 227 DGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSC 283
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + N L+ G G + + R +M++ +T L AF R
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 11/173 (6%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P +++N V+G LC + + + QM PD LTY + L K ++ +
Sbjct: 113 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQV 171
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM+ P + L D + A E+ +L G+ + + L+ GL
Sbjct: 172 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 231
Query: 219 LGRLSDVRRFAEEMLNRR-----ILIYDVTMQKLKKAFYNESRSMRDRFDSLE 266
RL + + RR I+ Y + L KA +RD D E
Sbjct: 232 CERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG-----RLRDAVDIFE 279
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P+ + N ++ LC+ D FD+M GA + YN+I L K + + E
Sbjct: 41 GLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHP-LCKARLLDEA 99
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+M P L I L A A+ ++ + + P + L+ G
Sbjct: 100 MGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHG 158
Query: 216 LRNLGRLSDVRRFAEEMLNRR 236
L GRL D + +EM++ R
Sbjct: 159 LSKAGRLRDAVQVLQEMVSAR 179
>gi|115474407|ref|NP_001060800.1| Os08g0107700 [Oryza sativa Japonica Group]
gi|113622769|dbj|BAF22714.1| Os08g0107700, partial [Oryza sativa Japonica Group]
Length = 374
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 13/242 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENC 60
+ G++ A G ++ R W E + + L L K+ EA+ LR M C
Sbjct: 101 CSRVGHLDLAFAALGRVI-RSGWTAE-AITFSPLLKALCDKKRTSEAMDIALRRMPVLGC 158
Query: 61 FPTLKFFSNALDILVKLNDST------HTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCN 113
P + ++ L L N S HT+ + D G G+ P+++ YN V+ GLL
Sbjct: 159 TPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRG-GYP--PDVVSYNTVINGLLRE 215
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+D + FDQM+ G PD +TYN I L K + + + M+KN P +
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + + +P AI ++ + +G+ P + N L+ L GR + R+ + M+
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335
Query: 234 NR 235
R
Sbjct: 336 KR 337
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M+ G L P+++ YN+++ L +D +MV +GA P+ +T+N +
Sbjct: 224 HLFDQMLDQG--LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ K ++ F M ++ +P T + L A +I++ +++ G P
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ LL G G L + + M+ I
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 101/258 (39%), Gaps = 38/258 (14%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L L+ +D ALK L M G P + ++ L D QL+D +V G
Sbjct: 210 LLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASG 269
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
P+ MY +V C+ + + R D+M G P+ +TY+++ E K K E
Sbjct: 270 RR--PDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIE 327
Query: 155 VENFFHEMIKNEWQP-TPLNCATAITMLLDADEPEFAIEIWNYI---------------- 197
+ EM+ + P TPL CA + +L + A EIW +
Sbjct: 328 ACDLTREMLGAGYVPDTPL-CAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLI 386
Query: 198 ------------------LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
LE G +P + N L++GL G L + R ++M+ RR
Sbjct: 387 YWLCKNGMVQEARGLFDELERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEP 446
Query: 240 YDVTMQKLKKAFYNESRS 257
+T + L K F +S
Sbjct: 447 NAMTYEALIKGFCKIGKS 464
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RGK D A + + M+ P +S ++ K S L M+G G+ +P+
Sbjct: 287 RGKLQDAA-RIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGY--VPD 343
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ VV +LC + + QMV PD+ + + L KN V E F
Sbjct: 344 TPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMVQEARGLFD 403
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
E+ + + P+ L + I L + E + A +W+ ++E P + L+ G +G
Sbjct: 404 ELERG-FVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIG 462
Query: 221 RLSDVRRFAEEMLNR 235
+ ++ +EM+ +
Sbjct: 463 KSNEGYALFKEMVAK 477
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 34/202 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A + EM E P V Y + + + EA R M G
Sbjct: 283 GYCHRGKLQDAARIMDEM-EAAGVKPNEV-TYSVVIEACCKEGKSIEACDLTREMLGAGY 340
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P + +D+L + + ++W MV
Sbjct: 341 VPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMVQEARG 400
Query: 96 -------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+P+L+ YN+++ LC N ++ R +D MV P+++TY + + K
Sbjct: 401 LFDELERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCK 460
Query: 149 NKKVHEVENFFHEMIKNEWQPT 170
K +E F EM+ P+
Sbjct: 461 IGKSNEGYALFKEMVAKGCTPS 482
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PNL+ N ++ L D+D + D+M G PD +TY + + +
Sbjct: 200 ITPNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 259
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVL 212
F +++ + +P AT T+L+D + + A I + + G+ P E + +V+
Sbjct: 260 QLFDDIVASGRRPD----ATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVV 315
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRIL--------IYDVTMQKLKKAFYNE 254
+ G+ + EML + + DV Q K NE
Sbjct: 316 IEACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANE 365
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 340 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S + K ++L+ M G L+ N + Y ++ D DN
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G P+ LTYN++ + L KN K+ + F + ++ +P I +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E E++ + G+ P + N ++ G G + ++M
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 14/241 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL K++ +A+ + M P F+ + L N ++
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G P+L+ Y VV LC D+D +M D + YN I
Sbjct: 207 AVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K K + + N F EM +P ++ I+ L + A + + ++E I
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + + L+ G+L + + +EM+ R I T L F M DR
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-----CMHDRL 379
Query: 263 D 263
D
Sbjct: 380 D 380
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + L + +A + L M P + FS +D VK +L+D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + P++ Y++++ C ++ +D F+ M+ FP+ +TY+ + + K
Sbjct: 353 EMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+V E F EM + + T I A + + A ++ ++ G+ P +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 209 ANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
N+LL GL G+L+ + I Y++ ++ + KA
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +A +MVE + P+ + T + L + EA+ + M C
Sbjct: 162 GYCHSKRISDAVALVDQMVE-MGYKPD-TFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + ++ L K D + L M + ++++YN ++ LC +D+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G PD TY+ + CL + + +MI+ + P + + I
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++++ +++ I P + + L+ G RL + + E M+++
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 241 DVTMQKLKKAFYNESR 256
VT L K F R
Sbjct: 398 VVTYSTLIKGFCKAKR 413
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 102/281 (36%), Gaps = 68/281 (24%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM--VGIGFNLM--- 98
+VD+A+ M FP++ F+ L + K+N + L + M +GI +L
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 99 ----------------------------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
P+++ ++++ C++ + + DQMV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G PD+ T+ + L + K E +M++ QP + T + L + + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 191 IE---------------IWNYILEN--------------------GILPLEASANVLLVG 215
+ I+N I++ GI P + + L+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L N GR SD R +M+ R+I VT L AF E +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 5/222 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V E + F EM +R + + Y T + + + D A + M
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K + +++ + + P++ YN ++ +C V++
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQR--STMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G P+ + YN + + E ++ +M ++ P T I
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E + E+ + G +AS L+ + + GRL
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 623
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
N L ++K++D+ V L+ MV P+++ +N ++ + N + V +QM
Sbjct: 56 NRLSDIIKVDDA---VDLFGDMVK--SRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G D TY++ C + ++ +M+K ++P + ++ + +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A+ + + ++E G P + L+ GL + S+ ++M+ R
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F +A+D + + + +D M + + PN+ +YN VV + D+D RF+ +
Sbjct: 42 FRSAIDAYCRARKMDYALLAFDTMKRL-IDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 100
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M A PD T+N++ ++ K + F EM + +P ++ T I L + +
Sbjct: 101 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 160
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E +++ ++E G EA+ +L+ GL GR+ D ++LN+R+L +
Sbjct: 161 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 220
Query: 247 LKKAFYNESRSMRDRFDSLERRWKTSQ 273
L + E++++R + +E WK Q
Sbjct: 221 LVEKLCGENKAVR-AMEMMEELWKKGQ 246
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
F M + P +V Y T + ++ +D+AL+F + M E P + F+ ++
Sbjct: 61 AFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 119
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ + + L+ M G PN++ +N ++ ++ ++ + +M+ G
Sbjct: 120 YCRSSKFDLALDLFREMKEKGCE--PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 177
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
T ++ + L + +V + +++ P+ + + + L ++ A+E+
Sbjct: 178 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 237
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + G P + L+ GLR GR F E+M+N IL VT
Sbjct: 238 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVT 287
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 91/256 (35%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ +A + + M + E V + + R + D AL R MK + C
Sbjct: 84 GYVKSGDMDKALRFYQRMGK--ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGC 141
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + + V++ M+ +G + +V LC VD+
Sbjct: 142 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF--SEATCEILVDGLCREGRVDDA 199
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ P Y + E L K E+ K P + C T +
Sbjct: 200 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 259
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + E A ++ GILP + N+LL L + +D R ++
Sbjct: 260 LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPD 319
Query: 241 DVTMQKLKKAFYNESR 256
+ T L F E R
Sbjct: 320 ETTYHVLVSGFTKEGR 335
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 11/250 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA+ M +R HV + ++ ++D A+K R M G+ C T
Sbjct: 438 KEGRLDEADGVVELMNKRGCKFNSHVC--NVLIDGFVKHSKLDSAVKVFREMSGKGCSLT 495
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ L++ + M+ G+ P++I Y+ ++G L +N +D R
Sbjct: 496 VVSYNILINGLLRAERFREAYDCVNEMLEKGWK--PDIITYSTLIGGLYESNMMDAALRL 553
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML-- 181
+ Q + G PD + YN++ L + KV + + + Q +N T T++
Sbjct: 554 WHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL----RQKKCVNLVTHNTIMEG 609
Query: 182 -LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A +IW +ILE+ + P S N+ L GL + GR++D F ++ L R L
Sbjct: 610 FYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPT 669
Query: 241 DVTMQKLKKA 250
+T L +A
Sbjct: 670 AITWNILVRA 679
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 4/229 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA F M F +P + ++ T L + Q A F + + P ++ ++
Sbjct: 95 EALHVFQTMPHVFGCSPT-IRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNV 153
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ ++ K + L M G G + P+ I Y ++G + + D+ FD+M
Sbjct: 154 LMKVMCKKGEFEKGRGLLTWMWGAGMS--PDRITYGTLIGGVAKSGDLGFALEVFDEMRE 211
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ-PTPLNCATAITMLLDADEPE 188
G PD + YNMI + K + + +++ E P+ ++ I+ L
Sbjct: 212 RGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFS 271
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+EIW + +N + + L+ GL G L R+ EEM+ R +
Sbjct: 272 EGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ ++ +D+ + F +M G ++YN++ L++ ++ E + +EM++
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
W+P + +T I L +++ + A+ +W+ L+ G P N+++ L + G++ D
Sbjct: 525 KGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVED 584
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+ L ++ + VT + + FY
Sbjct: 585 ALQLY-STLRQKKCVNLVTHNTIMEGFY 611
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGKQVDEALKFLRVMKGEN 59
G K G++ A + F EM ER P+ V+ Y + RG V + R+++ E
Sbjct: 192 GVAKSGDLGFALEVFDEMRER-GVEPD-VVCYNMIIDGFFKRGDFVKAGEMWERLLREEL 249
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
FP++ ++ + L K + +++W+ M +L Y+A++ L D+
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKK--NERKCDLFTYSALIHGLSEAGDLGG 307
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ +++MV G PD +T N + L K V E + EM K
Sbjct: 308 ARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGK 352
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L +V++AL+ ++ + C L + ++ K+ + ++W
Sbjct: 566 IIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWA 624
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + L P++I YN + LC+ V + F D + G P ++T+N++ +I
Sbjct: 625 HI--LEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 95 FNLMPNLIMYNAVVGLLCNNND---VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
F P + +N ++ ++ +N F++F+ P+ TYN++ + + K +
Sbjct: 107 FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVS---PNVETYNVLMKVMCKKGE 163
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ M P + T I + + + FA+E+++ + E G+ P N+
Sbjct: 164 FEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNM 223
Query: 212 LLVGLRNLGRLSDV-----RRFAEEMLNRRILIYDVTMQKLKKAF-YNESRSMRDRFDSL 265
++ G G R EE++ ++ Y+V + L K ++E + +R
Sbjct: 224 IIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKN 283
Query: 266 ERR 268
ER+
Sbjct: 284 ERK 286
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 101/271 (37%), Gaps = 16/271 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G++ A K + EMV R P+ V+ L L + V+E + M G+
Sbjct: 298 GLSEAGDLGGARKVYEEMVGR-GVRPD-VVTCNAMLNGLCKAGNVEECFELWEEM-GKCS 354
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ ++ L L + + LWD + L + Y VV LC N V+
Sbjct: 355 LRNVRSYNIFLKGLFENGKVDDAMMLWDGL------LEADSATYGVVVHGLCWNGYVNRA 408
Query: 121 FRFFDQMVFH--GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ ++ G D Y+ + L K ++ E + M K + C I
Sbjct: 409 LQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLI 468
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + + A++++ + G S N+L+ GL R + EML +
Sbjct: 469 DGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWK 528
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRW 269
+T L Y ES M D+ R W
Sbjct: 529 PDIITYSTLIGGLY-ESNMM----DAALRLW 554
>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
Length = 838
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 39/263 (14%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G + EA + F +M + P Y + L + R K A LR M+ P +
Sbjct: 485 SGKLDEAYEIFNQMKD-LGLKPSE-FTYNSLLYGICRRKDTSAAADLLREMRANAHKPWI 542
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
K ++ + L T +Q D M+ +GF +P+++ Y+A + +C D++N F
Sbjct: 543 KNCTDMVQQLCLSGRITEALQFLDGMLELGF--LPDIVTYSAAMNGMCKVGDIENALGLF 600
Query: 125 -----------------------------------DQMVFHGAFPDSLTYNMIFECLIKN 149
++M+ G P +TYN++ + K+
Sbjct: 601 LDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKS 660
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + ++MI E PT + + + L +A P+ AI +W + E G P +
Sbjct: 661 GSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAY 720
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
L+ GL GR+ + EEM
Sbjct: 721 TALVNGLCKCGRMETAVNYYEEM 743
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 40/257 (15%)
Query: 25 NPEHVLAYETFLITLIRGKQV---DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
N V A L +++RG Q D+ + + E+ P F+ + L K+
Sbjct: 395 NHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLD 454
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ L MVG+G L+M+N ++ LCN+ +D + F+QM G P TYN
Sbjct: 455 LALALTKDMVGLGCK--GKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNS 512
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + + K + EM N +P NC + L + A++ + +LE G
Sbjct: 513 LLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELG 572
Query: 202 ILP-------------------------LEASA----------NVLLVGLRNLGRLSDVR 226
LP L+ S+ N+L+ G R G+ + +
Sbjct: 573 FLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQ 632
Query: 227 RFAEEMLNRRILIYDVT 243
EEML++ +L VT
Sbjct: 633 EIMEEMLSKGMLPSVVT 649
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 4/131 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G EA + EM+ + V+ Y + + +D+A+ + M E
Sbjct: 621 GFRKAGKFDEAQEIMEEMLSKGML--PSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEK 678
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ LD L + LW M G + PN I Y A+V LC ++
Sbjct: 679 PPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCS--PNGIAYTALVNGLCKCGRMETA 736
Query: 121 FRFFDQMVFHG 131
++++M G
Sbjct: 737 VNYYEEMKTKG 747
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +A+ M +R W EHVL ++ + +V++A++ L M+ + P K
Sbjct: 222 GRPEDASAVLQRMSKR-AWVDEHVLTM--LIVAYSKWGKVEDAVELLGRMEALDMRPNEK 278
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S + L + + ++ M GF++ +L MY+ ++ LC+ N++ + F+
Sbjct: 279 TLSVLVHGLARQGRVDVAMNMFGKMASYGFSV--DLAMYSVLIEGLCHGNEMGKAVKLFE 336
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M PD I E + V F +E A+ +
Sbjct: 337 DMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINE--------------NAVHL----- 377
Query: 186 EPEFAIEIWNYILENGI--LPLEASANVLLVGLRNLGRLSD 224
+P A+ ++N IL+ I +EA+ +L +R R+SD
Sbjct: 378 KPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSD 418
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ A F ++ + + P+ V+A+ + + + DEA + + M +
Sbjct: 586 GMCKVGDIENALGLFLDISSKC-YLPD-VVAHNILINGFRKAGKFDEAQEIMEEMLSKGM 643
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ +DI K + M I P ++ Y +++ LCN D
Sbjct: 644 LPSVVTYNLMIDIWCKSGSIDKAITCVYKM--IDEEKPPTVVTYTSLLDGLCNAGRPDEA 701
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M G P+ + Y + L K ++ N++ EM
Sbjct: 702 IVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEM 743
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M FE N ++ Y + +++ ALK M G C P ++ ++ + L K
Sbjct: 204 MSNGFEPN---IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ L+ MV G L PN++ Y A++ CN + FR M +G P+
Sbjct: 261 GKVERAMVLFSRMVEAG--LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
T++++ + L K +KV E + F ++K + + + I L + + A E+ +
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ G +P S + L+ GL +LS E+M+ + I VT
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F M R Y L L+ V EA+ M+ ++C
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCL--RTAFTYTALLHGLLGAGMVREAMTVFVGMRADSC 173
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + + L + + GF PN+++YNA++ CN ++++
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE--PNIVVYNALIDGYCNAGEMEHA 231
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ M + P+ TY + L K+ KV F M++ +P + I
Sbjct: 232 LKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQG 291
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A + + + NG++P + + +VL+ L ++ + + F ++ + + +
Sbjct: 292 QCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVN 351
Query: 241 DVT--------------------MQKL-KKAFYNESRSMRDRFDSLERRWKTSQ 273
+V MQK+ + F ++ S D L R+ K SQ
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V A F MVE E N V+ Y + + A + L +M+
Sbjct: 256 GLCKSGKVERAMVLFSRMVEAGLEPN---VVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P FS +D L K +V G + N ++Y +++ LC +D
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKV--NEVVYTSLIDGLCKTGKIDA 370
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M+ G PD+ +Y+ + + L + KK+ + +M++ Q +P+ I
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L+ E +I++ ++ GI P + V + GR+ D +M++R +
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 240 YDVTMQKLKKAFYN 253
VT L + + N
Sbjct: 491 NLVTYNTLIRGYAN 504
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G K G + A++ +M+ H +Y + + L R K++ +A L M KG
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAH--SYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ +D LV+ S +++D M+ G N P+++ Y V C ++
Sbjct: 419 QASPVT--YTIIIDELVREVGSEGPKKIFDKMIATGIN--PDIVTYTVFVRSYCEEGRME 474
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ QMV G FP+ +TYN + V + + F M+ W+P + +
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Query: 179 TMLLDADEPEFAIEIWN 195
+++ + +++IW
Sbjct: 535 RLVVKKSSSDNSVDIWK 551
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 20/265 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM E +P V+ Y L ++ KQV +A M C P
Sbjct: 502 KVGLIEQARSWFDEM-ESVGCSPS-VVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPN 559
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN--------------LMPNLIMYNAVVG 109
+S +D L K +S +++ M+G N + PN++ Y A++
Sbjct: 560 TITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALID 619
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + V + D M +G P+ + Y+ + + K K+ + F M K + P
Sbjct: 620 GLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLP 679
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T + I + + AI++ + +LE+ P + ++ GL +G +
Sbjct: 680 TVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739
Query: 230 EEM----LNRRILIYDVTMQKLKKA 250
M N ++ Y + L K+
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKS 764
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F M + + P V Y + + + + +++D A+K L M +C
Sbjct: 655 GFCKVGKLDNAQEVFFRM-SKCGYLPT-VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSC 712
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L ++ + ++L +M G N PN++ Y +++ L + VD
Sbjct: 713 TPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN--PNVVTYTSLIDGLGKSGKVDMS 770
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ F QM+ G P+ +TY ++ + E + EM + W
Sbjct: 771 LQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 817
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
D+A + +++M + P +S + L + L+ M +G ++P++ Y
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG--VIPDVYTYT 494
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ C ++ +FD+M G P +TY + +K K+V + + FH M+
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIW 194
P + + + L A E + A E++
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVY 583
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 9/193 (4%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M+ER ++ + VL + + L+ DEA+ FL M+ +C P + + L +K
Sbjct: 264 MIEREDFKLDTVLCTQ-MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKK 322
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ +M+ G N PN ++N++V CN D ++ ++M G P +
Sbjct: 323 KQLGWCKRIISMMMNEGCN--PNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYV 380
Query: 138 TYNMIFECLIKNKKVHE------VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN+ + +++ E + EM+ + +N A L + + A
Sbjct: 381 VYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAF 440
Query: 192 EIWNYILENGILP 204
+I ++ G +P
Sbjct: 441 QIIKLMMRKGFVP 453
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T L ++ KQ+ + + +M E C P F++ + D + +L
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN------VFRFFDQMVFHGAFPDSLTYNM 141
+ M G G P ++YN +G +C+ ++ + + +++M+ + +
Sbjct: 368 NRMAGCGCP--PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN 425
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + M++ + P + IT L +A + E A ++ + G
Sbjct: 426 FARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG 485
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++P + +L+ +G + R + +EM
Sbjct: 486 VIPDVYTYTILIDSFCKVGLIEQARSWFDEM 516
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 8/201 (3%)
Query: 26 PEHVLAYETFLITLIRGKQVDE------ALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
P + Y F+ ++ G+++ A K M +C +N L +
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 435
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
Q+ +M+ GF +P+ Y+ V+ LC V+ F F +M G PD TY
Sbjct: 436 FDKAFQIIKLMMRKGF--VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
++ + K + + ++F EM P+ + + L + A +I++ +++
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553
Query: 200 NGILPLEASANVLLVGLRNLG 220
G P + + L+ GL G
Sbjct: 554 AGCAPNTITYSALVDGLCKAG 574
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 96/246 (39%), Gaps = 16/246 (6%)
Query: 1 GWEKEGNVVEANKTFGEMV-------ERFEWNPEH-------VLAYETFLITLIRGKQVD 46
G K G +A + + +M+ F + EH V+ Y + L + +V
Sbjct: 569 GLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVV 628
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A + L VM C P + +D K+ + +++ M G+ +P + Y +
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGY--LPTVHTYTS 686
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ + + +D + QM+ P+ +TY + + L + + + M K
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + + I L + + + +++++ ++ G P + VL+ G L +
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAH 806
Query: 227 RFAEEM 232
EM
Sbjct: 807 SLLSEM 812
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGE 58
G K GN+VEA K + R + P V + Y T L + + EA+ M
Sbjct: 1378 GLCKGGNLVEAKK----FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 1433
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
N P +S+ L L + + V L+ +G G L PN +MY +V L
Sbjct: 1434 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG-TLFPNHVMYTCLVDGLSKAGHPK 1492
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F FF++M+ G PD++ +N I + + ++ + +FF M W N AT
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM---RWWGVCPNLATYN 1549
Query: 179 TMLLDADEPEFA---IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+L + + + +++ ++ GI P + + + L++GL G + +M+
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFD 263
L T L Y+ES MR FD
Sbjct: 1610 GTLADQFTFNILINK-YSESGKMRKAFD 1636
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 17/239 (7%)
Query: 4 KEGNVVEANKTF------GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
+ GNV EA K + G + F N + +L R ++ EA KFL M
Sbjct: 1276 QHGNVTEAMKVYAVMNCNGHGADHFTCN--------VLVSSLCRDGKLGEAEKFLCHMSR 1327
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ + D + +D M+ G + P+ Y +++ LC ++
Sbjct: 1328 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH--PSFFTYGSLLKGLCKGGNL 1385
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+F +++ + DS+ YN + K+ +HE F +M++N P ++
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445
Query: 178 ITMLLDADEPEFAIEIWNYILENGIL-PLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+T L + A+ ++ + G L P L+ GL G F EEM+ +
Sbjct: 1446 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 1504
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y F+ L + +A L+ M+ E P ++ ++ VK Q+++
Sbjct: 1054 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 1113
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+L PN + YNA++G C+ D + R D M G + +TY + L K
Sbjct: 1114 EMSK--FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 1171
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++K + M N+ + I L + A+++ + ++G+ P +
Sbjct: 1172 HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 1231
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ L+ G +G + + M +++ + L
Sbjct: 1232 YSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 1270
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 98/254 (38%), Gaps = 4/254 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+ G +++AN F M R+ ++ Y L + + + L M E FP
Sbjct: 1521 SRRGQMMKANDFFSTM--RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFP 1578
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
F + + L K V+L M+ G + + +N ++ + + F
Sbjct: 1579 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG--TLADQFTFNILINKYSESGKMRKAFD 1636
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ M G FPD TYN IF L K E HEM++N P T I +
Sbjct: 1637 LVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMC 1696
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ + A ++ + + G E + + ++ GL + G+ D + ML R+L
Sbjct: 1697 RVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA 1756
Query: 243 TMQKLKKAFYNESR 256
T L F +++
Sbjct: 1757 TFTTLMHRFCRDAK 1770
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 4/246 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + A +TF E+V + P V L ++++ K+ + R M +
Sbjct: 924 YLKEGMIDYAVETF-ELVGLVGFKPS-VYTCNMILASMVKDKRTELVWSLFREMSDKGIC 981
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F+ ++ L + L M GF +P ++ YN ++ C
Sbjct: 982 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF--VPTIVTYNTLLNWYCKKGRYKAAI 1039
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ G D TYN+ + L N + + +M K P + T I
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A +++N + + + P + N L+ G ++G + R + M + + +
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 242 VTMQKL 247
VT L
Sbjct: 1160 VTYGTL 1165
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKL 77
V R W E + + L L K+ EA+ LR M C P + ++ L L
Sbjct: 117 VIRSGWTAE-AITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDE 175
Query: 78 NDST------HTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFDQMVFH 130
N S HT+ + D G G+ P+++ YN V+ GLL +D + FDQM+
Sbjct: 176 NRSQQALHLLHTMMVADDTRG-GYP--PDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQ 232
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G PD +TYN I L K + + + M+KN P + + + + +P A
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDA 292
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I ++ + +G+ P + N L+ L GR + R+ + M+ R
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 4/211 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A FG ++ P+ V+ + + L + D+A + M G P
Sbjct: 427 GKVDDAMAQFGRLISE-GLTPDAVV-FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
FF+ L+ L K ++D+MV + ++ ++I YN ++ C + VD + +
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRV--DVQRDVITYNTLIDGYCLHGKVDEAAKLLE 542
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
MV G P+ +TYN + KN ++ + + F +M P + +T + L A
Sbjct: 543 GMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ +++++GI + N++L+GL
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V EA K MV + + + Y T + + ++++A R M +
Sbjct: 527 GYCLHGKVDEAAKLLEGMV--LDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGV 584
Query: 61 FPTLKFFSNALDIL--VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + +S L L + + + LW I GI F++ YN ++ LC NN D
Sbjct: 585 NPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG----TYNIILLGLCQNNCTD 640
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ R F + ++ T+N++ + L+K + E ++ F ++ P
Sbjct: 641 DALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 94/226 (41%), Gaps = 5/226 (2%)
Query: 1 GWEKEGNVVE-ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G +EG ++ A F +M+++ +P+ V+ Y + + L + + +D+A L M
Sbjct: 211 GLLREGRQLDTAYHLFDQMLDQ-GLSPD-VVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ L + ++ M G P++ YN ++G LC N
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVE--PDVFTYNTLMGYLCKNGRSME 326
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ FD MV G P+S TY + + ++ + M++N QP I
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ + A+ +++ + G+ P + +++ L +G++ D
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDA 432
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A F M R P+ V Y T + L + + EA K M
Sbjct: 282 GYCSSGKPNDAIGVFKRMC-RDGVEPD-VFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH 339
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + L L D+MV G + P+ ++N ++G + VD+
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG--IQPDHYIFNILIGTYTKHGKVDDA 397
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G PD++TY ++ + L KV + F +I P + I
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
L D+ + A E+ ++ GI P
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICP 481
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M+ G L P+++ YN+++ L +D +MV +GA P+ +T+N +
Sbjct: 224 HLFDQMLDQG--LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ K ++ F M ++ +P T + L A +I++ +++ G P
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ LL G G L + + M+ I
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 2/208 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ + + L + ++A+ + M + P + ++ + L K S +++D
Sbjct: 274 ITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDS 333
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV G PN Y ++ + + D MV +G PD +N++ K+
Sbjct: 334 MVKRGHK--PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKH 391
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
KV + F +M + P + + L + + A+ + ++ G+ P
Sbjct: 392 GKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVF 451
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ GL + A EM+ R I
Sbjct: 452 RNLIHGLCARDKWDKAEELAVEMIGRGI 479
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G +AN+ + MV+ HV Y + R ++++A+K M C PT
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHV--YNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D L K L M+ GF P++ Y +++ LC + VD R
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFK--PDIRTYASLIRGLCRDKKVDVALRI 566
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+D+++ G D + +N++ L KV E + EM + P + T + +
Sbjct: 567 WDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYE 626
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A +W IL+NG+ P + N + GL + R + E+L I+ +T
Sbjct: 627 IGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVIT 686
Query: 244 MQKLKKA 250
L +A
Sbjct: 687 WSILVRA 693
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 3/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V EA + ++ +P+ V + T + L + A + L +
Sbjct: 377 GLLDSGMVSEATELLKQLENDASCSPDKV-TFGTLIHGLCENGYANRAFEILEDARNSGE 435
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ ++ K + +++ MV G PN +YNA++ C + +++
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK--PNSHVYNALINGFCRVSKINDA 493
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + +M +G P +TYN + + L K +K E + EM++ ++P A+ I
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + A+ IW+ IL+ G+ N+L+ GL + G++ + EM +
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613
Query: 241 DVTMQKLKKAFY 252
VT L FY
Sbjct: 614 LVTYNTLMDGFY 625
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 4/197 (2%)
Query: 41 RGKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNL 97
R D AL R + C P ++ + LD V+ + + + G +
Sbjct: 95 RALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRI 154
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN ++ LC DVD F + G PD +TY+ + L K+ ++ +
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
EM Q + ++ E A+++W ++ + G P A+ V+L GL
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGL 274
Query: 217 RNLGRLSDVRRFAEEML 233
LGR + M+
Sbjct: 275 CKLGRFKEAGEVWSRMM 291
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + + L +VDEA MK +NC P L ++ +D ++ LW
Sbjct: 579 VMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWT 638
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ G L P+++ YN + LC+ N ++++ G P +T++++ +IK
Sbjct: 639 AILDNG--LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ Y L R ++A+K + ++++ P L + LD L KL ++W
Sbjct: 228 AVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVW 287
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + N + + Y ++ LC + DVD+ R + MV G D YN + +
Sbjct: 288 SRM--MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC 345
Query: 148 KNKKVHEVENFF 159
+ + E F+
Sbjct: 346 EVGRTGEAWKFW 357
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 39/287 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ + A + +M ER W P +V+ Y T + L + V EAL M G+
Sbjct: 191 GLCKTGDTLAAVEWLRKMEER-NWKP-NVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGV 248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL----------------------- 97
P L ++ + L T L D M+ +G L
Sbjct: 249 RPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKS 308
Query: 98 ----------MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P++ YN+++ + C N ++ R F MV G PD + + +
Sbjct: 309 VIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWC 368
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K +++V + EM K + P + T I A P A E++ + + G +P
Sbjct: 369 KDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ V+L GL LS+ AE M L+ I+IY + + + A
Sbjct: 429 TCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSA 475
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 34/253 (13%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD-------------- 88
K +DEAL + M P++K F+ L ++V+L T + L
Sbjct: 55 KNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTIT 114
Query: 89 -----------IMVGIGFNLM---------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+V GF+++ P ++ A++ LC +V D M
Sbjct: 115 LNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHME 174
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
D TY ++ L K + +M + W+P + +T + L
Sbjct: 175 KMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVS 234
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ + + + G+ P + L+ GL N GR + +EM+ + + T+ L
Sbjct: 235 EALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILV 294
Query: 249 KAFYNESRSMRDR 261
AF E + M+ +
Sbjct: 295 DAFCKEGKVMQAK 307
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F M ++ P ++ L L +G + EA+ M+ N
Sbjct: 401 GFCQAGRPLAAKELFLNM-HKYGQVP-NLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNL 458
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S LD + +L+ + G G + N+ Y ++ LC +D
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQI--NVYTYTIMIKGLCKQGSLDKA 516
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
M +G PD+ TYN+ + L+ K++
Sbjct: 517 EDLLINMEENGCLPDNCTYNVFVQGLLTKKEI 548
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 40 IRGKQV-DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
+R ++V D L F +M + P ++ S L LVK ++L+D M+ +G
Sbjct: 167 VRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIR-- 224
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +Y V+ LC D+ QM G + + YN++ + L K +KV E
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ E +P + T + L E E +E+ + +L P EA+ + L+ GLR
Sbjct: 285 KKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRK 344
Query: 219 LGRLSD----VRRFAEEMLNRRILIYDVTMQKLKKAF-YNESRSMRDRFDSL 265
G++ + V+R AE ++ I +Y+ + L K ++E+ + DR +
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKI 396
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 98/270 (36%), Gaps = 39/270 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG + EA +M R ++ Y + ++ K L L+ M
Sbjct: 621 GFCREGKLEEALSVCQDMGLR--GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGL 678
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN------- 113
P +++ +D K D +WD+M+ G +PN + Y AV+ LC
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG--CVPNEVTYTAVINGLCKAGFVNEA 736
Query: 114 ---------NNDVDNVFRF-------------------FDQMVFHGAFPDSLTYNMIFEC 145
N V N + + G ++ TYNM+
Sbjct: 737 EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRG 796
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ ++ E MI + P + T I+ L ++ + AIE+WN + E GI P
Sbjct: 797 FCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ G G + EML +
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 2/227 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + R ++D AL FL M P++ +++ ++ K D + L
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M I L P ++ Y +++G C+ ++ R + +M G P T+ + L +
Sbjct: 463 M--INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRA 520
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + F EM + +P + I + A E N ++E GI+P S
Sbjct: 521 GLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSY 580
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL G+ S+ + F + + + ++ L F E +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 5/223 (2%)
Query: 23 EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E P+ V+ Y T + L + ++ + L+ + M P+ S+ ++ L K
Sbjct: 292 ELKPD-VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEE 350
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L + G + PN+ +YNA++ LC + D FD+M G P+ +TY+++
Sbjct: 351 ALNLVKRVAEFGVS--PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ + K+ +F EMI +P+ + I + A + ++ +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL 468
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL--IYDVT 243
P + L+ G + G+++ R EM + I+ IY T
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Query: 7 NVVEANKTFGEMVERFE-WN--------PEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
++++A G+ E F W+ P V Y + L + V+EA M+
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEILCSKMRP 745
Query: 58 ENCFPTLKFFSNALDILVK-LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + LDIL K + D V+L + ++ L+ N YN ++ C
Sbjct: 746 GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK---GLLANTATYNMLIRGFCRQGR 802
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +M+ G PD +TY + L + V + ++ M + +P + T
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 177 AITMLLDADEPEFAIEIWNYILENGILP 204
I A E A E+ N +L G+ P
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLKP 890
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 8/209 (3%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y L R +++EAL + M L + +D +K D + L
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G L P+ ++Y +++ D F +D M+ G P+ +TY + L K
Sbjct: 673 MHDRG--LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA-DEPEFAIEIWNYILENGILPLEAS 208
V+E E +M P + + +L + + A+E+ N IL+ G+L A+
Sbjct: 731 GFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTAT 789
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N+L+ G GR+ + A E++ R I
Sbjct: 790 YNMLIRGFCRQGRMEE----ASELITRMI 814
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN-MIFECLIKNK- 150
IG + P+ I Y ++ LC NDV ++ M G PD + YN +I C + +
Sbjct: 814 IGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 151 -KVHEVENFFHEMIKNEWQPTPLNCATAIT 179
K E+ N EM++ +P T I+
Sbjct: 874 GKATELRN---EMLRQGLKPNTETSETTIS 900
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L + +A + LR M P + FF+ +D VK + L+
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M I +++PN+ YN+++ C + + + FD MV G FPD +TYN + K
Sbjct: 279 EM--IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+K+V + F EM T I A + A +++N +++ G+ P +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
N+LL L N G++ E++ ++ I+ Y++ +Q L +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 8/246 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN++EA + EM+ R P +V Y + + + +A +M + CFP
Sbjct: 266 KEGNLLEARNLYKEMIRR-SVVP-NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ + YN ++ C ++ +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQG--LVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G PD +TYN++ +CL N K+ + ++ K+E + I L
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL--RNLGRLSD--VRRFAEEMLNRRILI 239
D+ + A ++ + G+ P + ++ GL + L R +D RR E+ I
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 240 YDVTMQ 245
YD T++
Sbjct: 502 YDETLR 507
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ + L+ + N V L D M G GF +PN+++YN V+ LC N D++N
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF--VPNVVIYNTVINGLCKNRDLNNAL 204
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F M G D++TYN + L + + + +M+K + P + I
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ ++ ++P + N L+ G G L D + + M+++
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 242 VTMQKLKKAFYNESR 256
VT L F R
Sbjct: 325 VTYNTLITGFCKSKR 339
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 2/194 (1%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+ D+A M P++ F+ L ++ K+N + L+ M +G + +L
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS--HDLYS 116
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+ ++ C + + +M+ G P +T + + + E + M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ P + T I L + A+E++ + + GI + N L+ GL N GR +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 224 DVRRFAEEMLNRRI 237
D R +M+ R+I
Sbjct: 237 DAARLLRDMVKRKI 250
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVM--KGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+V+AY L + R V+ A + L M +GE C P + +++ + + + +
Sbjct: 234 NVVAYSALLDGICRFGIVERAFELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALS 293
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++M G PN + +A + +C N + +V+ F +++V G+ Y+ + C
Sbjct: 294 VLELMEVRG--CAPNRVTASAWINGICTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVC 351
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL-P 204
LIK KKV E E F + + +P L C+ I + ++ + + G L
Sbjct: 352 LIKIKKVEEAEKTFRRALSSGMKPDSLACSMMIREICSEKRVLDGFCLYEEVEKTGCLSS 411
Query: 205 LEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
++ ++LL GL G ++ R A ML +RI + ++K+ + N
Sbjct: 412 IDIDIYSILLAGLCQQGHSAEAARLARSMLEKRIPLRAPHVEKIVEHLKN 461
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 37/176 (21%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVD-----------------------------------N 119
FN+ P+ YN V+ LC DVD
Sbjct: 159 FNIRPDTTAYNVVIRSLCEKGDVDMAKKLMGEMGLIDLYPDMITYVSMIKGFCDVGRLEE 218
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATA 177
F F M HG +P+ + Y+ + + + + V EM K P + +
Sbjct: 219 AFALFPVMSVHGCYPNVVAYSALLDGICRFGIVERAFELLAEMEKQGEGCCPNVITYTSV 278
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I + + A+ + + G P +A+ + G+ G+L DV F E ++
Sbjct: 279 IQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWINGICTNGQLQDVYNFIERIV 334
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+V ANK F EM+ + + +P+++ Y T + +G +V E M
Sbjct: 372 GFFKLGHVRTANKWFDEMLSK-KISPDYI-TYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D+ K + + L + MV +G + PN++ Y A++ LC + ++D
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG--MTPNIVTYGALIDGLCKHGELDTA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G + YN + + K + + EM P + T I
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++ +L+ G+ P + NVL+ G LG L D R ML + I+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 241 DVTMQKLKK 249
+T L K
Sbjct: 608 AITYNTLMK 616
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 105/267 (39%), Gaps = 44/267 (16%)
Query: 23 EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
WN +Y + +L R +V EA + L M + P + +S +D L +
Sbjct: 255 SWN---TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV-----------------DNVF---- 121
++L D M G L PN YN+++ LLC DNV
Sbjct: 312 ALKLMDDMQIKG--LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 122 --------------RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
++FD+M+ PD +TY + + + KV E +N FHEMI
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
+P + T I + A E A + N +++ G+ P + L+ GL G L
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 228 FAEEM----LNRRILIYDVTMQKLKKA 250
+EM L + IY+ + + KA
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKA 516
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ +A K EM E +P+ + Y T + R +D+A K L+ M
Sbjct: 512 GICKAGNIEQAIKLMKEM-EVAGIDPD-AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ F+ N +L L D + W + GI +P+ I YN ++ C N +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLG-WMLEKGI----VPDAITYNTLMKQHCIRNSM 624
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ + + +M G PDS TYN++ + K + + E + EMI+ + PT
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 111/302 (36%), Gaps = 51/302 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V+E F EM+ R P+ V Y T + + ++ A M
Sbjct: 407 GFGQGGKVIEPQNLFHEMISR-GLKPDEV-TYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L K + +L D M G L N+ +YN++V +C +++
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL--NVCIYNSMVNGICKAGNIEQA 522
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP------LNC 174
+ +M G PD++TY + + + + + EM+ QPT +N
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG----------------LRN 218
+ ML D D + ++LE GI+P + N L+ +RN
Sbjct: 583 FCMLGMLEDGDR------LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636
Query: 219 LGRLSDVRRF-------------------AEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
G D + +EM+ + + + L K FY + +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696
Query: 260 DR 261
R
Sbjct: 697 AR 698
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K EM+ + + P++V+ Y T + + V A K+ M + P
Sbjct: 340 KIGKSFEAEKVLREMMSQ-KIIPDNVV-YTTLIHGFFKLGHVRTANKWFDEMLSKKISPD 397
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + L+ M+ G L P+ + Y ++ + C ++ N F
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRG--LKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV G P+ +TY + + L K+ ++ EM K Q + + +
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E AI++ + GI P + ++ LG + + +EML+R + VT
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 244 MQKLKKAF 251
L F
Sbjct: 576 FNVLMNGF 583
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 5/228 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W P + A++ F L+ + EA K L + T+ NA L ++ +++
Sbjct: 186 WGPNPI-AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDS-CNAF--LSRIANNSEG 241
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+++ I V + + N YN ++ LC V R QM F + PD ++Y+ +
Sbjct: 242 IEM-AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ ++ + +M +P + I +L + A ++ ++ I+
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
P L+ G LG + ++ +EML+++I +T L + F
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + VM+ P
Sbjct: 148 KEGEIRLAQSVF-DSITKWGLRPS-VVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLBNG--LVPNXVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 264 YRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +K+ D +L +M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVH--PDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I D
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 342 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K V+L+ M G L+ N + Y ++ D DN
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G P+ +TYN + + L KN K+ + F + +++ +PT I +
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A + E +++ + G+ P N ++ G G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ +A+ + M P F+ + L N ++
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G PNL+ Y VV LC D+D F ++M + + Y+ +
Sbjct: 209 AVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + + N F EM +P + ++ I+ L + + A + + ++E I
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+L + + +EM+ R I T L F M DR
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-----CMHDRL 381
Query: 263 D 263
D
Sbjct: 382 D 382
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 4/243 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV+R P +++ Y + L + +D A L M+ + +S
Sbjct: 208 EAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L+ M G + PN+I Y++++ LCN + R M+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKG--VRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + +K K+ E E + EMIK P ++ I D +
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A ++ ++ P + N L+ G R+ + EM R ++ VT L
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 250 AFY 252
F+
Sbjct: 444 GFF 446
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L ++ +A + L M P + F+ +D VK +L+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + P++ Y++++ C ++ +D F+ M+ FP+ +TYN +
Sbjct: 354 DEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K++ E F EM + + T I A + + A ++ ++ +G+ P
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
+ N LL GL G+L E + + I Y++ ++ + KA
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 103/256 (40%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +A +MVE + P+ + + T + L + EA+ + M C
Sbjct: 164 GYCHGKRISDAVALVDQMVE-MGYRPD-TITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + ++ L K D L + M + N+++Y+ V+ LC D+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA--KIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TY+ + CL ++ + +MI+ + P + I
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++++ +++ I P + + L+ G RL + + E M+++
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 241 DVTMQKLKKAFYNESR 256
VT L F R
Sbjct: 400 VVTYNTLINGFCKAKR 415
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 8/198 (4%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL----MPNLIMYNAVVGLLCNNN 115
C+ F S + D L + H+++L D + G + +P++ +N ++ +
Sbjct: 40 CYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMK 99
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
D V ++M G + TYN++ C + ++ +M+K ++P+ + +
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A+ + + ++E G P + L+ GL + S+ + M+ R
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 236 ----RILIYDVTMQKLKK 249
++ Y V + L K
Sbjct: 220 GCQPNLVTYGVVVNGLCK 237
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y T L L R K D L M E C P + ++ + + ND +++L++
Sbjct: 67 VHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFN 126
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M +G P+ + Y ++ L D + QM G PD+ TY++I CL K
Sbjct: 127 VMQMVGCE--PDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGK 184
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K++ F EM + P+ + I + A + + A+++++ + E G P +
Sbjct: 185 AGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVT 244
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
+++ L N G + D + EEM
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFEEM 268
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 81/235 (34%), Gaps = 35/235 (14%)
Query: 12 NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
N EM+ E +V+ Y + R +D +LK VM+ C P + +
Sbjct: 87 NNLLDEMIR--EGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLI 144
Query: 72 DILVKLNDSTHTVQLWDIMVGIGF---------------------------------NLM 98
D+ K + L+ M GF
Sbjct: 145 DLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYA 204
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L+ YN ++ L D + + + G PD +TY +I E L + + E
Sbjct: 205 PSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQV 264
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F EM + W + M E A + +N +L++G+ P + N LL
Sbjct: 265 FEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLL 319
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y ++G+L D + D+M+ G P+ +TYN + C + + F+ M
Sbjct: 70 YTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQ 129
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+P + T I + A + A++++ + G P + ++++ L G+L+
Sbjct: 130 MVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLN 189
Query: 224 DVRRFAEEMLNR----RILIYDVTMQKLKKA 250
+ EM +R ++ Y++ + KA
Sbjct: 190 AAYKLFCEMTDRGYAPSLVTYNIIIDLHAKA 220
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
F++ K PTLK ++ +D +++++ L++ M G P+ YN+++
Sbjct: 777 FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG--CAPDTFTYNSLIDA 834
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ ++ +F +D+M+ G P+++TYNM+ L+K+ ++ + + ++ ++ ++ PT
Sbjct: 835 HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPT 894
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
P I LL + + A E+++ ++ G P A N+L+ G LG + F +
Sbjct: 895 PCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFK 954
Query: 231 EMLNRRI 237
M+ I
Sbjct: 955 RMVKEGI 961
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA F E+ + P+ V Y + + QVDEA+K L M C P +
Sbjct: 488 GRLGEAKAMFNEL-KSSGLAPDSV-TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI 545
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D L K Q++ M + NL P ++ YN ++ L + + F+
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEM--NLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M HG P+++T+N + +CL KN +V F++M +P L T I + +
Sbjct: 604 SMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN 663
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ + AI +++ ++ + P + LL G+ G++ D R E+
Sbjct: 664 QIKNAIWLFHQ-MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITED 708
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L+R ++D+AL M+ PT + +D K ++ ++ M
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM 465
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + PN++ NA + L + F+++ G PDS+TYNM+ +C K
Sbjct: 466 KARG--IAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVG 523
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+V E EM K + +P + + I L A E A +++ + E + P + N
Sbjct: 524 QVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYN 583
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
+LL GL G++ + E M
Sbjct: 584 ILLAGLGKEGQIQKAVQLFESM 605
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 10/251 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G + EA + M + P+ V+ Y + L +++D+A+ MK + P
Sbjct: 276 RDGKIDEAYRIMKRMDDD-GCGPD-VVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPD 333
Query: 64 LKFFSNALDILVKLNDSTH---TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ LD K +D H ++W M G+ P+++ + +V LC ++
Sbjct: 334 KVTYVTLLD---KFSDCGHLDKVEKIWTEMEADGY--APDVVTFTILVNALCKAGRINEA 388
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D M G P+ TYN + L++ ++ + + F M +PT I
Sbjct: 389 FDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDY 448
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ P A+E + + GI P + N L L +GRL + + E+ + +
Sbjct: 449 HGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508
Query: 241 DVTMQKLKKAF 251
VT + K +
Sbjct: 509 SVTYNMMMKCY 519
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L++ EAL+ R M E P+LK FS + K + + L + M
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ Y + +L + +D +R +M G PD +TY ++ + L +
Sbjct: 256 ESMG--LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTAR 313
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ + F +M + +P + T + D + +IW + +G P +
Sbjct: 314 KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L+ L GR+++ + M + +L
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGVL 401
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + E + EM+ R + + Y + L++ ++D+A+ + + PT
Sbjct: 837 KSGKINELFDLYDEMLTR--GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPT 894
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F +D L+K +++D MV G PN +YN +V VD F
Sbjct: 895 PCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR--PNSAIYNILVNGYGKLGHVDTACEF 952
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +Y ++ + L +V + ++F ++ + P + I L
Sbjct: 953 FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR 1012
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A+ +++ + GI+P + N L++ L +G + + + EE+
Sbjct: 1013 SQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 10/232 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+ E K+ G + F +N + + + +++E M C P
Sbjct: 811 NLFEEMKSAGCAPDTFTYN--------SLIDAHGKSGKINELFDLYDEMLTRGCKPNTIT 862
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ + LVK N + L+ +V F+ P + ++ L + +D+ FD
Sbjct: 863 YNMVISNLVKSNRLDKAMDLYYNLVSGDFS--PTPCTFGPLIDGLLKSGRLDDAHEMFDG 920
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV +G P+S YN++ K V FF M+K +P + + +L A
Sbjct: 921 MVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR 980
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ + + + G+ P + N+++ GL R + EM NR I+
Sbjct: 981 VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIV 1032
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V Y T L +D+ K M+ + P + F+ ++ L K
Sbjct: 332 PDKV-TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M G ++PNL YN ++ L N +D+ F M G P + TY ++ +
Sbjct: 391 LLDTMRKQG--VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDY 448
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ + F +M P + C ++ L + A ++N + +G+ P
Sbjct: 449 HGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N+++ +G++ + + EM
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEM 535
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 2/229 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L + +++DEA+ L M+ E FP L F+ + L K D +L D M
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNM 266
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G +PN + YNA+V LC ++ +QMV + P+ +T+ + +
Sbjct: 267 FLKG--CVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQG 324
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + + ++ I+ L + A+E+W ++ G P +
Sbjct: 325 RASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYS 384
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
L+ GL G+L + R F EM N+ L T L + ++ S +
Sbjct: 385 ALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 46 DEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWD-IMVGIGFNLMPNLIM 103
++A+ M GE C T+K F++ L+++V+ ++ ++ ++ N+ PN +
Sbjct: 113 EKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALT 172
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+N V+ +C VD F ++ PD+ TY+ + L K +++ E + EM
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQ 232
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
P + I+ L + A ++ + + G +P E + N L+ GL G+L
Sbjct: 233 VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLE 292
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+M++ + + DVT L F + R+
Sbjct: 293 KAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRA 326
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 2/224 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + L ++++A+ L M C P F ++ V ++ ++
Sbjct: 276 VTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVS 335
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ G N +Y++++ LC + + +MV G P+++ Y+ + + L +
Sbjct: 336 LEARGHR--GNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCRE 393
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ E F EM + P ++ + +A + AI +W + N + E
Sbjct: 394 GKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCY 453
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
++L+ GL G+ + ++ML+R I + V + F N
Sbjct: 454 SILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCN 497
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +A + + EMV + P + + Y + L R ++DEA FL MK +
Sbjct: 354 GLCKEGKFNQAMELWKEMVGK-GCGP-NTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-------IGFNLMPN------------- 100
P +S+ + + DS + +W M + ++++ N
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471
Query: 101 -------------LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF--PDSLTYNMIFEC 145
++ Y++++ CN N V+ + F+QM+ G PD +TYN++
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNA 531
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
K + + + M+ P + C
Sbjct: 532 FCIQKSIFRAIDILNIMLDQGCDPDFITC 560
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 42/283 (14%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
R W V+ Y T + +L +GK V +A + M + FP + FS +D L K
Sbjct: 139 RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKG 198
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ L +M+ G PN++ Y A++ C N V+ F+ MV G P+ YN
Sbjct: 199 KQAMNLLAMMMKKGVK--PNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYN 256
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN--------C-----ATAITMLLDADEP 187
+I L K K+V E N F EM + P + C +T++ ++ +
Sbjct: 257 IIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSI 316
Query: 188 EFAIEIWNY----------------------ILENGILPLEASANVLLVGLRNLGRLSDV 225
++I Y I + GI P + L+ GL GRL D
Sbjct: 317 GKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDA 376
Query: 226 RRFAEEMLNRRILI----YDVTMQKL-KKAFYNESRSMRDRFD 263
+E+L I Y+V + L KK ++E+ ++ R +
Sbjct: 377 YVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 35/219 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ V +A F MV+ E +V Y + L + K+VDEA+ + M +
Sbjct: 226 GYCLVNQVNKALNIFNVMVQ--EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKI 283
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FN----------------- 96
P + ++ +D L KL + +++L D M IG +N
Sbjct: 284 NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAIT 343
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ PN+ Y ++ LC + +++ + F +++ G TYN++ L
Sbjct: 344 LVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLC 403
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
K E M N P ++ T I L + E
Sbjct: 404 KKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++ +N ++ L N F Q+ F+G P +T ++ C + + +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++K ++P + T I + + A+ ++++ +G + S +L+ GL
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTM 244
+G R A +ML + + DV M
Sbjct: 128 MGE----TRAAMQMLRKTWVNADVVM 149
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/135 (17%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L L + +D+A+ ++ +K + P + ++ +D L K ++
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ G+++ + YN ++ LC D +M + PD+++Y I L +
Sbjct: 382 EILTEGYHI--TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439
Query: 149 NKKVHEVENFFHEMI 163
+ + MI
Sbjct: 440 KGETVKTNKLLCAMI 454
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 23/279 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A + G MV++ P +V AY T + +L + +QV EA M +
Sbjct: 142 GLCKVGNTSAAIRLLGSMVQK-NCQP-NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 199
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L L + H L + MV +MP+++ +N VV LC V
Sbjct: 200 SPDIFTYNSLIHALCNLCEWKHVATLLNEMV--DSKIMPDVVSFNTVVDALCKEGKVTEA 257
Query: 121 FRFFDQMVFHGA-FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D+M+ G P+ ++YN + K +++ + F EM + E P + +T I
Sbjct: 258 HDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 317
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM------- 232
L + + AI +++ ++ +P + +L L L R AE M
Sbjct: 318 GLCHVERLQDAIALFHEMVACSQIPNLVTYRIL------LDYLCKNRYLAEAMALLKAIE 371
Query: 233 ---LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
L+ I + ++ + + +A E + RD F +L +
Sbjct: 372 GSNLDPDIQVNNIAIDGMCRA--GELEAARDLFSNLSSK 408
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 13/181 (7%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L+D M+G GF P+++ Y ++ LC + R MV P+ YN I
Sbjct: 117 ALHLFDKMIGEGFR--PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 174
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K+++V E N F EM+ P + I L + E + + N ++++ I
Sbjct: 175 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 234
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR-----RILIYD------VTMQKLKKAF 251
+P S N ++ L G++++ ++M+ R ++ Y+ +Q++ KA
Sbjct: 235 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAM 294
Query: 252 Y 252
Y
Sbjct: 295 Y 295
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA+ +M++R P +V++Y T + + +++D+A+ GE C
Sbjct: 250 KEGKVTEAHDVVDKMIQRGGCMP-NVISYNTLINGYCKIQRIDKAMYLF----GEMCRQ- 303
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L+P+ + Y+ ++ LC+ + +
Sbjct: 304 --------------------------------ELIPDTVTYSTLIHGLCHVERLQDAIAL 331
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV P+ +TY ++ + L KN+ + E + + P AI +
Sbjct: 332 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A E E A ++++ + G+ P + ++++ GL G L + + EM
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 440
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 4/197 (2%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC--NNNDVDN 119
P+ F+ L + K+ + + L M F + PN+ + ++ C N +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS--FGIPPNIYTLHILINSFCHLNRGKIGE 116
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
FD+M+ G PD +TY + L K M++ QP T I
Sbjct: 117 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 176
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A +++ ++ GI P + N L+ L NL V EM++ +I+
Sbjct: 177 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 236
Query: 240 YDVTMQKLKKAFYNESR 256
V+ + A E +
Sbjct: 237 DVVSFNTVVDALCKEGK 253
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F EMV + +++ Y L L + + + EA+ L+ ++G N P ++ +
Sbjct: 327 DAIALFHEMVACSQI--PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 384
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
A+D + + + L+ + G L P++ Y+ ++ LC +D + F +M
Sbjct: 385 AIDGMCRAGELEAARDLFSNLSSKG--LQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 442
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+G + YN I ++N + EM+ + + ML D
Sbjct: 443 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 496
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+V ANK F EM+ + + +P+++ Y T + +G +V E M
Sbjct: 372 GFFKLGHVRTANKWFDEMLSK-KISPDYI-TYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D+ K + + L + MV +G + PN++ Y A++ LC + ++D
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG--MTPNIVTYGALIDGLCKHGELDTA 487
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G + YN + + K + + EM P + T I
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++ +L+ G+ P + NVL+ G LG L D R ML + I+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 241 DVTMQKLKK 249
+T L K
Sbjct: 608 AITYNTLMK 616
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 8/249 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA++ +M F + V++Y T + ++ +ALK + M+ + P
Sbjct: 272 GKVKEAHRLLMQM--DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRY 329
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+++ + +L K+ S ++ M + ++P+ ++Y ++ V ++FD
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREM--MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ PD +TY + + + KV E +N FHEMI +P + T I + A
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYD 241
E A + N +++ G+ P + L+ GL G L +EM L + IY+
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507
Query: 242 VTMQKLKKA 250
+ + KA
Sbjct: 508 SMVNGICKA 516
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 112/302 (37%), Gaps = 51/302 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V+E F EM+ R P+ V Y T + + ++ A M
Sbjct: 407 GFGQGGKVIEPQNLFHEMISR-GLKPDEV-TYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L K + +L D M G L N+ +YN++V +C +++
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL--NVCIYNSMVNGICKAGNIEQA 522
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP------LNC 174
+ +M G PD++TY + + + + + EM+ QPT +N
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG----------------LRN 218
+ ML D D + ++LE GI+P + N L+ +RN
Sbjct: 583 FCMLGMLEDGDR------LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636
Query: 219 LGRLSDVRRF-------------------AEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
G D + +EM+ + + + L K FY + + +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696
Query: 260 DR 261
R
Sbjct: 697 AR 698
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K EM+ + + P++V+ Y T + + V A K+ M + P
Sbjct: 340 KIGKSFEAEKVLREMMSQ-KIIPDNVV-YTTLIHGFFKLGHVRTANKWFDEMLSKKISPD 397
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + L+ M+ G L P+ + Y ++ + C ++ N F
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRG--LKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV G P+ +TY + + L K+ ++ EM K Q + + +
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E AI++ + GI P + ++ LG + + +EML+R + VT
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 244 MQKLKKAF 251
L F
Sbjct: 576 FNVLMNGF 583
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 5/228 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W P + A++ F L+ + EA K L + T+ NA L ++ +++
Sbjct: 186 WGPNPI-AFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDS-CNAF--LSRIANNSEG 241
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+++ I V + + N YN ++ LC V R QM F + PD ++Y+ +
Sbjct: 242 IEM-AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ ++ + +M +P + I +L + A ++ ++ I+
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
P L+ G LG + ++ +EML+++I +T L + F
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 8/224 (3%)
Query: 17 EMVERFEW-----NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
E VE FE N AY T ++ + DEA L K C P++ ++ L
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCIL 380
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
L K ++ ++ M + PNL YN ++ +LC +V+ F+ D M G
Sbjct: 381 TCLGKKGRLGEALRTFEEMKK---DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
FP+ +T N++ + L K KK+ E + F M P + + I L + A
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ +L++ +P L+ GR D + +EM++R
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 7/228 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+AY L L + ++ EAL+ MK ++ P L ++ +D+L K + ++ D
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRD 431
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PN++ N ++ LC +D F+ M PD +T+ + + L K
Sbjct: 432 AMKEAG--LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V + + +M+ ++ P + + I E +I+ ++ G P
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKAFY 252
N + + G R EE+ +R ++ Y + + L KA +
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 97/263 (36%), Gaps = 38/263 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + + +VD A KF +K P +++ + +L K N V++++
Sbjct: 268 IVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFE 327
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +P YN ++ + D + ++ G P + YN I CL K
Sbjct: 328 QME--QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGK 385
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E F EM K + P I ML A E E A ++ + + E G+ P +
Sbjct: 386 KGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444
Query: 209 ANV-----------------------------------LLVGLRNLGRLSDVRRFAEEML 233
N+ L+ GL GR+ D R E+ML
Sbjct: 445 VNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML 504
Query: 234 NRRILIYDVTMQKLKKAFYNESR 256
+ + V L K+F+ R
Sbjct: 505 DSDKIPNAVVYTSLIKSFFKCGR 527
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V +A + + +M++ + P V+ Y + + + + + ++ K + M C
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDS-DKIPNAVV-YTSLIKSFFKCGRKEDGHKIFKEMIHRGC 543
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L+ + +D + K ++ L++ + GF +P+++ Y+ ++ L
Sbjct: 544 SPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGF--IPDVMSYSILIHGLVKAGFARET 601
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M G D+ YN + K+ KV++ EM QPT + + I
Sbjct: 602 YELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDG 661
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ NG+ + L+ G +GR+ + EE++ +
Sbjct: 662 LAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 716
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+++ I+ ++ E ++ M+ P ++ + L + +S + L+ M +G
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELG 228
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + +L + V+ + +D D+M + D + YN+ +C K KV
Sbjct: 229 YEVSVHL--FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDM 286
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FFHE+ + P + + I +L + + A+EI+ + +N +P + N +++
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIM 346
Query: 215 GLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
G + G+ + E R ++ Y+ + L K
Sbjct: 347 GYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGK 385
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 35/264 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G E + F M E+ H AY TF+ + +V++A + L MK +
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTH--AYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWD----------------IMVGIGF--------- 95
PT+ + + +D L K++ L++ ++ G G
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYL 708
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L PN+ +N ++ L +++ F M P+ +TY+++ L
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLC 768
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +K ++ F+ EM K +P + T I L A A ++ NG +P A
Sbjct: 769 RVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828
Query: 208 SANVLLVGLRNLGRLSDVRRFAEE 231
S N ++ GL R + + EE
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEE 852
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + K++DEA M + C P F + +D L K +L++ M + + +
Sbjct: 452 LCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM--LDSDKI 509
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN ++Y +++ ++ + F +M+ G PD N +C+ K + +
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F E+ + P ++ + I L+ A E++ + E G + + N + G
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629
Query: 219 LGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
G+++ + EEM + ++ Y + L K
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 10/275 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G++K ++ + E+V R F+ L Y + + + L+ M+ +N
Sbjct: 246 GFKKARDITAMELFYHEIVRRGFKATS---LTYNIRIDAYCKKGYFGDGLRIFEEMEKDN 302
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVD 118
C PTL+ + + + L+D IG NL P+ YNA++ L D++
Sbjct: 303 CPPTLETITTLIHGAGVARNIHKARHLFD---EIGKRNLKPDTGAYNALISSLVKCKDIE 359
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ R D+M DS+TY+ IF L+K V + +H MI ++ P +
Sbjct: 360 SAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLM 419
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + W Y+L+ G P + ++L+ GL + GRL + +++ + R +
Sbjct: 420 KFFCVNSRLDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRGRLLEAYECSKQFVERGMR 479
Query: 239 IYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
+ +V + L+++ + D+ L++ K Q
Sbjct: 480 MSEVVYRMLERSL--QQSDFTDKLRELDQMIKKLQ 512
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ A + F +M R E Y T + + +DEA + L M P+
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNER--TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ L + L MVG G ++P+++ Y+ ++ N ++D F+
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKG--VLPDVVSYSTIISGFARNQELDRAFQM 250
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ PD++TY+ + + L + +++ E + F EM+ + P T I
Sbjct: 251 KVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCK 310
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
+ A+ + + +++ G LP + NVL+ GL R + RR
Sbjct: 311 EGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNA 106
L+F + M+ C P + ++ +D KL T + + + +G L PNLI +N
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLK---RTDEAFGFLRSMGLKGLEPNLITFNM 58
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ LC + + +M G PD +TYN + K H+ EM++N
Sbjct: 59 IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + + I + A A+E ++ + G+ P E + ++ G G L +
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178
Query: 227 RFAEEM 232
R EM
Sbjct: 179 RVLNEM 184
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y T + R +++D A + M G++ P +S+ + L + T ++
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQ 287
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ I L P+ Y ++ C D++ D+M+ G PD++TYN++ L K
Sbjct: 288 EMLTI--KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNK 345
Query: 149 NKKVHEVENFFHEMIKNEWQPTPL-------NCA-----TAITMLLD------ADEPEFA 190
+ E ++ ++ P+ + NC +A+ ++ DE A
Sbjct: 346 QARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDE---A 402
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++ ++ P EA NV++ G +G + + +EM++ + + VT+ L KA
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462
Query: 251 FYNES 255
+ E
Sbjct: 463 LFTEG 467
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 4/237 (1%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F EM ER P +V+ Y T + + K+ DEA FLR M + P L F+ ++ L
Sbjct: 6 FKEM-ERNGCLP-NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+ T ++ M G+ +P+ + YN +V C + +MV +G P
Sbjct: 64 CRDGRLKETSEVLVEMSRKGY--VPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ +TY + + K ++ FF +M P T I + A +
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
N + +G +P + N L+ G LGR+ + ++M+ + +L V+ + F
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+V+ E NP + Y T + L R ++DEA L+VMK + P + + L +
Sbjct: 313 LVKGCEPNP---ITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD------------ 125
++ D M+ G +P+++ YN+++ LC N + D F+
Sbjct: 370 GKVDLAIEFLDDMISGGH--LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAG 427
Query: 126 -----------------------QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+M+ +G PD +TYN + CL ++ V + +M
Sbjct: 428 SYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDM 487
Query: 163 IKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
++E QPT ++ T + L AIE+ ++ G LP E + +L+ G+ G
Sbjct: 488 FESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGW 547
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
D A ++N + D + ++ +K F
Sbjct: 548 RYDAMELANLLVNMDAISED-SFKRFQKIF 576
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 8/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V A+K M +R + P+ V+ Y + ++D AL+ + + +NC
Sbjct: 155 GFCKADRVDHASKVLDRMKKR-GFEPD-VVTYNILIGNFCGRGRLDLALRVMDQLLKDNC 212
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L D M+ G L P+ YN VV +C +D
Sbjct: 213 KPTVITYTILIEATITQGGIDEAMKLLDEMLSRG--LRPDRYTYNVVVNGMCKEGMLDRA 270
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F ++ +G TYN++ L+ K E +M+ +P P+ +T IT
Sbjct: 271 FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA 330
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
L + + A + + E + P S + L+ L G++ F ++M++
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD 390
Query: 237 ILIYDVTMQKLKK 249
IL Y+ + L K
Sbjct: 391 ILSYNSILASLCK 403
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 3/188 (1%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+ + DE+L FL+ M P + + + + +Q+ +I+ G P+
Sbjct: 89 KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG---KPD 145
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ YNAV+ C + VD+ + D+M G PD +TYN++ ++
Sbjct: 146 VFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMD 205
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+++K+ +PT + I + + A+++ + +L G+ P + NV++ G+ G
Sbjct: 206 QLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEG 265
Query: 221 RLSDVRRF 228
L F
Sbjct: 266 MLDRAFEF 273
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 20/264 (7%)
Query: 1 GWEKEGNVVEA----NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G EG + EA +KT GE + P+ V+ Y T + L + A++ LR M
Sbjct: 229 GLCVEGKIGEALHLFDKTIGE-----GFQPD-VVTYGTLMNGLCKVGNTSAAIRLLRSMV 282
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+NC P + ++ +D L K T L+ M+ G + P++ YN+++ LCN +
Sbjct: 283 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS--PDIFTYNSLIHALCNLCE 340
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+V ++MV P+ + ++ + + L K + + MIK +P
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD----VV 396
Query: 177 AITMLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T L+D E + A+++++ ++ G +P S N+L+ G + R+ E+M
Sbjct: 397 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 456
Query: 233 LNRRILIYDVTMQKLKKAFYNESR 256
+ ++ VT L + R
Sbjct: 457 SLQGLIADTVTYNTLIHGLCHVGR 480
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG ++ EAL GE P + + ++ L K+ +++ ++L MV
Sbjct: 225 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQ- 283
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N PN+I YN ++ LC + V F F +M+ G PD TYN + L +
Sbjct: 284 -KNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWK 342
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V +EM+ ++ P + +T + L A ++ + +++ G+ P + L+
Sbjct: 343 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 402
Query: 214 VG 215
G
Sbjct: 403 DG 404
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A + MV++ P +V+AY T + +L + +QV EA M +
Sbjct: 264 GLCKVGNTSAAIRLLRSMVQK-NCRP-NVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L L + H L + MV +MPN+++++ VV LC +
Sbjct: 322 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPNVVVFSTVVDALCKEGMIAIA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ G PD +TY + + ++ E F M+ P + I
Sbjct: 380 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A+ + + G++ + N L+ GL ++GRL EM+
Sbjct: 440 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 41/261 (15%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L + + A + +M P + ++ +D ++ V+++D
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G +PN+ YN ++ C +D +QM G D++TYN + L
Sbjct: 420 TMVHKG--CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLN--------C-----ATAITML-------LDAD--- 185
++ FHEM+ + P + C A A+ +L LDAD
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 537
Query: 186 ------------EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFA 229
E E A ++++ + G+ P + N+++ GL G L + R+
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 597
Query: 230 EEMLNRRILIYDVTMQKLKKA 250
E +R IY+ ++ ++
Sbjct: 598 ENGCSRDGCIYNTIIRGFLRS 618
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 15/197 (7%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
N F L+ A +L KL + P+ +N ++ LC +
Sbjct: 193 NSFCHLRRLGYAFSVLAKL---------------LKLGCQPDNTTFNTLIRGLCVEGKIG 237
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
FD+ + G PD +TY + L K M++ +P + T I
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + A +++ ++ GI P + N L+ L NL V EM+N +I+
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357
Query: 239 IYDVTMQKLKKAFYNES 255
V + A E
Sbjct: 358 PNVVVFSTVVDALCKEG 374
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 5/187 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L ++ A+ M P L + LD L K + H +
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK---NHHLAEAMV 521
Query: 89 IMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++ I G NL ++++YN + +C +++ F + G PD TYN++ L
Sbjct: 522 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC 581
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E F +M +N T I L ++E A ++ +L G +
Sbjct: 582 KRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEG-FSADV 640
Query: 208 SANVLLV 214
S L+V
Sbjct: 641 STTTLIV 647
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 4/183 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + A F EMV + P+ ++ Y L L + + EA+ L+ ++G N
Sbjct: 474 GLCHVGRLQHAIALFHEMVASGQI-PD-LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ A+D + + + L+ + G L P++ YN ++ LC +D
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKG--LQPDVRTYNIMIHGLCKRGLLDEA 589
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M +G D YN I +++ + EM+ + + M
Sbjct: 590 NKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649
Query: 181 LLD 183
L D
Sbjct: 650 LSD 652
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 2/193 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+AL M + P+ F+ L + K+ + + L M F + P++
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDS--FGIPPDVYTL 188
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ C+ + F +++ G PD+ T+N + L K+ E + F + I
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+QP + T + L AI + +++ P + N ++ L ++++
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308
Query: 225 VRRFAEEMLNRRI 237
EM+ + I
Sbjct: 309 AFNLFSEMITKGI 321
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLIT-LIRG----KQVDEALKFLRVM 55
G KE EA K F EM R LA +T T LIRG ++ +A + M
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRG-------LALDTVCYTALIRGLLQTGKIPQASSVYKTM 390
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
C P + S +D L K V+++ M G L PN ++Y+A++ LC
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG--LAPNEVVYSALIHGLCKAR 448
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+D QM PD++TYN++ + L K+ V FF EM++ +P
Sbjct: 449 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 502
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y L L + +++EA+ LR + C P + +++ +D L K S +L+
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L + + Y A++ L + + M HG PD +T + + + L K
Sbjct: 354 EMASRGLAL--DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ F M P + + I L A + + A+E+ + + P +
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 471
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
N+L+ GL G + R F +EML + Y++ + L KA
Sbjct: 472 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKA 517
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+V A F EM+E P+ V Y + L + D A L M
Sbjct: 478 GLCKSGDVEAARAFFDEMLE-AGCKPD-VYTYNILISGLCKAGNTDAACGVLDDMSSS-- 533
Query: 61 FPTLKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+F +S+ +D L K L+ M G + N ++ LC N VD
Sbjct: 534 ----RFVYSSLVDGLCKSGKLEGGCMLFHEMERSG---VANSQTRTRLIFHLCKANRVDE 586
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F+ + G P YN I LIK+ KV+E + + EM + W+P
Sbjct: 587 AVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKP 634
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 82/216 (37%), Gaps = 4/216 (1%)
Query: 42 GKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
++ +EA +R M+ + P+LK + L L K S + D + ++ +
Sbjct: 167 AREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK---SGKVLAAMDHFEAVRRSMPVS 223
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ ++ L + + +G D TY I L KNKK+ E
Sbjct: 224 AATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALME 283
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
++ N PT + L E AI++ I++NG P + L+ GL
Sbjct: 284 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 343
Query: 221 RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R + + +EM +R + + V L + +
Sbjct: 344 RSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGK 379
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V+EA + F EMV R +P+ ++ Y + + L ++DEA + +M + C
Sbjct: 375 KNGKVLEAKELFEEMV-RMSIDPD-IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++L+ M G L+ N + YN ++ DVD F
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM F G PD TYN++ L N ++ + F +M K E + T I +
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A ++ + G+ P + ++ GL G L +V +M ++ D T
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610
Query: 244 MQ 245
+
Sbjct: 611 LS 612
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EMV+R +P ++ Y + + ++DEA + M ++CFP
Sbjct: 952 KEGKLVEAEKLYDEMVKR-SIDPS-IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++++ M G L+ N + YN ++ L D D
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRG--LVGNTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G P+ +TYN + + L KN K+ + F + +++ +PT I +
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E +++ + G+ P + N ++ G G + +EM
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V +A +MVE + P+ ++AY + +L + K+V++A F + ++ +
Sbjct: 267 GFCRRNRVSDAVSLVDKMVE-IGYKPD-IVAYNAIIDSLCKTKRVNDAFDFFKEIERKG- 323
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ PN++ Y A+V LCN++ +
Sbjct: 324 ------------------------------------IRPNVVTYTALVNGLCNSSRWSDA 347
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R M+ P+ +TY+ + + +KN KV E + F EM++ P + ++ I
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + A ++++ ++ G L S N L+ G R+ D + EM R ++
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 241 DVTMQKLKKAFYN 253
VT L + F+
Sbjct: 468 TVTYNTLIQGFFQ 480
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL K++ EA+ + M P F+ + L N ++
Sbjct: 759 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 818
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L D MV G P+L+ Y VV LC D D F ++M P L YN I
Sbjct: 819 AMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K K + + N F EM +P + ++ I+ L + A + + ++E I
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + + L+ G+L + + +EM+ R I VT L F M DR
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF-----CMHDRL 991
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 992 DEAKQMFE 999
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F + +ER P +V+ Y + L + +A + L M + P + +S LD
Sbjct: 315 FFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 373
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
VK +L++ MV + + P+++ Y++++ LC ++ +D + FD MV G
Sbjct: 374 VKNGKVLEAKELFEEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D ++YN + K K+V + F EM + + T I A + + A E +
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + GI P + N+LL GL + G L E+M R +
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ P + Y + R Q+ AL L M P + S+ L+
Sbjct: 716 SLGEQMQNLGI-PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 774
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V L D M G+ PN + +N ++ L +N D+MV G
Sbjct: 775 YCHSKRISEAVALVDQMFVTGYQ--PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 832
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY ++ L K N ++M + + +P L T I L + A+ +
Sbjct: 833 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + GI P + + L+ L N GR SD R +M+ R+I T L AF
Sbjct: 893 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952
Query: 254 ESR 256
E +
Sbjct: 953 EGK 955
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + D A L M+ P + ++ +D L K + L+
Sbjct: 835 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN++ Y++++ LCN + R M+ PD T++ + + +K
Sbjct: 895 EMETKG--IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E + EM+K P+ + ++ I D + A +++ +++ P +
Sbjct: 953 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
N L+ G R+ + EM R + + Y++ +Q L +A
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 3/233 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P V + T + L + EA+ + M + C P L + ++ L K D+
Sbjct: 796 YQPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
L + M L P +++YN ++ LC +D+ F +M G P+ +TY+ +
Sbjct: 855 FNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
CL + + +MI+ + P + I + + A ++++ +++ I
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + L+ G RL + ++ E M+++ VT L K F R
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A++ +M+ER + NP+ V + + ++ ++ EA K M + P++ +S+
Sbjct: 923 DASRLLSDMIER-KINPD-VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ + Q+++ MV + P+++ YN ++ C V+ F +M
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 1038
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G +++TYN++ + L + + F EM+ + P + T + L + E
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 1098
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
A+ ++ Y+ + + P + N+++ G+ G++ D
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 12/224 (5%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG--- 94
T +R ++++A+ M FP++ F+ L +VKL + +D+++ +G
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL-------KKYDVVISLGKKM 214
Query: 95 --FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ +L +N V+ C V +M+ G PD +T + + +V
Sbjct: 215 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ + +M++ ++P + I L A + + I GI P + L
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 334
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ GL N R SD R +M+ ++I +T L AF +
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 6/225 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y T + L + K +D+AL + M+ + P + +S+ + L + +L
Sbjct: 870 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ N P++ ++A++ + + +D+MV P +TY+ +
Sbjct: 930 DMIERKIN--PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ E + F M+ P + T I E +E++ + + G++ +
Sbjct: 988 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
N+L+ GL G + +EM++ I+ Y+ + L K
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 5/222 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V E + F EM +R + + Y + L + D A + + M +
Sbjct: 1019 GFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K + +++ + + P + YN ++ +C V++
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR--SKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G PD + YN + + E + F EM ++ P T I
Sbjct: 1135 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E + E+ + G +AS L+ + + GRL
Sbjct: 1195 RLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 1235
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTL-KFFSNALDILVKLNDSTHTVQLWDI 89
Y L+ I+ +AL LR G+ + K N L L KL+D+ V L+
Sbjct: 630 GYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSEL-KLDDA---VALFGE 685
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV P++I ++ ++ + N D V +QM G + TY+++ C +
Sbjct: 686 MVK--SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 743
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ +M+K ++P + ++ + + A+ + + + G P +
Sbjct: 744 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 803
Query: 210 NVLLVGL 216
N L+ GL
Sbjct: 804 NTLIHGL 810
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + AN+ M R + P+ V+ Y + + ++D AL+ + +NC
Sbjct: 147 GFIKANQLENANRVLDRMKSR-GFLPD-VVTYNIMIGSFCSRGKLDLALEIFEELLKDNC 204
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L D M+ G L P+ + YNA++ +C VD
Sbjct: 205 EPTVITYTILIEATILDGGIDVAMKLLDEMLSKG--LEPDTLTYNAIIRGMCKEMMVDKA 262
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD +TYN++ L+ K E E EMI +P + + I
Sbjct: 263 FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGT 322
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L + E A+ + + E G+ P + L+ G GRL F E M++
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 4/243 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G + A K EM+ + P+ L Y + + + VD+A + LR + C P +
Sbjct: 221 DGGIDVAMKLLDEMLSK-GLEPD-TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDI 278
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L L+ + +L M+ IG PN++ ++ ++G LC + V+
Sbjct: 279 ITYNILLRTLLSRGKWSEGEKLISEMISIGCK--PNVVTHSILIGTLCRDGKVEEAVNLL 336
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD+ Y+ + + ++ F MI + P +N T + L
Sbjct: 337 RSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRT 396
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+E++ + E G P +S N L L + G ++LN+ I ++T
Sbjct: 397 GKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITY 456
Query: 245 QKL 247
L
Sbjct: 457 NSL 459
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 8/231 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G V EA M E+ P+ Y+ + R ++D A +FL M + C P
Sbjct: 325 RDGKVEEAVNLLRSMKEK-GLKPD-AYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + L + + +++++ + +G PN+ YN + L ++ D
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP--PNVSSYNTLFSALWSSGDRYRALEM 440
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+++ G PD +TYN + CL ++ V E +M ++P ++ + L
Sbjct: 441 ILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCK 500
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ AIE+ + E G P E + +L+ G+ S +R A E+ N
Sbjct: 501 VNRANDAIEVLAAMTEKGCQPNETTYILLIEGI----GFSGLRAEAMELAN 547
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 23 EWNPEHVLAY---ETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
E HVL++ E L+ L+ R + +E+L FL M + P + + +
Sbjct: 56 ETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFF 115
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ +I+ G P++ YNA++ N ++N R D+M G PD
Sbjct: 116 NSRNIGKATRVMEILERYG---KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPD 172
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TYN++ K+ F E++K+ +PT + I + + A+++ +
Sbjct: 173 VVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLD 232
Query: 196 YILENGILPLEASANVLLVGL 216
+L G+ P + N ++ G+
Sbjct: 233 EMLSKGLEPDTLTYNAIIRGM 253
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + ++ EA + L MK C P + +S+ + L K Q+ +
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLI 147
M + PN++ YN ++ LC + +D +QM G + + Y+ + + L
Sbjct: 247 QMRDSHHD--PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E + M + +P + ++ + L A + E A+E + G P
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ L+ GL + GRL++ R EEM
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G EA E + R P+ V+ Y + + L + +++EA++ +R M E C
Sbjct: 302 GLCKLGRTQEARSVM-EAMARAGCRPD-VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + + L +L ++ V+ G G + P++ YNA++G LC +
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI 419
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
D+ +FF +M G PD ++Y+ I E L ++ + + E E+
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%)
Query: 50 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG 109
+ L M + P + ++ L+ L KL +L M+ G P+++ Y+ ++
Sbjct: 31 RLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS 90
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C V+ +++ G PD+L Y + L K+ ++ E EMI+ P
Sbjct: 91 GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T + T I+ E A + + +G+ + N L+ GL GRL + +
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 230 EEM 232
E M
Sbjct: 211 ERM 213
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V E+ + E++ R P+ L Y + +L + ++ EAL+ L M C
Sbjct: 91 GYCKAGKVEESRELLKEVISRG-LRPD-ALMYTKVVASLCKSARLGEALELLEEMIRAGC 148
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL F+ + + + L M G +++ YN ++ LC +
Sbjct: 149 CPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK--ADVVTYNTLMDGLCKAGRLQEA 206
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G PD + Y+ L K+ KV + +M + P + T +
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDG 266
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV-GLRNLGRLSDVRRFAEEM 232
L + + + A+E+ + + L +V GL LGR + R E M
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G+ K+G + + M R + P +V++Y L L + ++ EA + +R M +G
Sbjct: 19 GFSKQGRPGDCERLLETMAAR-DIQP-NVVSYNGLLEGLCKLERWHEAEELVRDMISRGG 76
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + +S L K + +L ++ G L P+ +MY VV LC + +
Sbjct: 77 RSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG--LRPDALMYTKVVASLCKSARLG 134
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
++M+ G P +T+N + + K + ++ +M + + + T +
Sbjct: 135 EALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLM 194
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-- 236
L A + A ++ + +G P + + + GL G++ D + E+M +
Sbjct: 195 DGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD 254
Query: 237 --ILIYDVTMQKLKKA 250
++ Y+ + L K+
Sbjct: 255 PNVVTYNTILDGLCKS 270
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 45/222 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGEN 59
G K G V++A++ +M R + +V+ Y T L L + ++D AL+ + M +
Sbjct: 231 GLCKSGKVLDAHQVLEQM--RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C + +S +D L KL + + + M G P+++ Y+++V LC ++
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR--PDVVTYSSLVNGLCKAGKIEE 346
Query: 120 VFRFFDQMVFHGAFPD----------------------------------------SLTY 139
+M G P+ TY
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY 406
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
N + L K ++ + FF M P ++ +T + L
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN + +NA+V + R + M P+ ++YN + E L K ++ HE E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 159 FHEMIKNEWQPTP--LNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+MI + TP + +T ++ A + E + E+ ++ G+ P
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +++A K F EMV + P+ V+ Y T + L + AL+ L+ M+ + C
Sbjct: 19 GLCSKAKIMDAVKLFDEMV-KMGHEPD-VITYSTIINGLCKMGNTTMALQLLKKMEEKGC 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K T + + MV G + P++ Y++++ CN V+
Sbjct: 77 KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG--IPPDVFTYSSILHGFCNLGRVNEA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QMV P+ +T+ ++ + L K + + E F M + +P +
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A +++N + G P S N+L+ G GR+ + + EM ++ +
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254
Query: 241 DVTMQKLKKAFYNESR 256
T L + F R
Sbjct: 255 IFTYSTLMRGFCQVGR 270
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 10/262 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V EA F EMV+ E P V Y + L +V+EA + M N P F
Sbjct: 96 VTEAMDFFSEMVK--EGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF 153
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D L K + +++ M G L P++ YNA+V C+ + +D + F+ M
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKG--LEPDVYTYNALVDGYCSRSQMDEAQKLFNIM 211
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G P+ +YN++ K+ ++ E + EM P +T + P
Sbjct: 212 DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRRILIYDVT 243
+ A E+ + G+LP + +++L GL G L + ++ E + I IY +
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331
Query: 244 MQKLKKAFYNESRSMRDRFDSL 265
++ + + + + R+ F +L
Sbjct: 332 IEGM--CTFGKLEAARELFSNL 351
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + EA K F +++R P +V +Y + + ++DEA L M ++
Sbjct: 194 GYCSRSQMDEAQKLF-NIMDRKGCAP-NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + ++ +L M G L+PNLI Y+ V+ LC + +D
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG--LLPNLITYSIVLDGLCKHGHLDEA 309
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P+ Y ++ E + K+ F + QPT + I+
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
LL A E++ + NG LP + NV++ G G + R EEM+ +
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PTL F+ L L V+L+D MV +G P++I Y+ ++ LC +
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHE--PDVITYSTIINGLCKMGNTTMAL 65
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M G P+ + YN I + L K++ V E +FF EM+K P ++ +
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ A ++ ++E ++P + + +L+ GL
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL 160
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
L P L+ +N ++ LC+ + + + FD+MV G PD +TY+ I L K
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+M + +P + T I L A++ ++ +++ GI P + + +L
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
G NLGR+++ ++M+ R ++ VT
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVT 152
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 9/260 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V EA F +MVER P V + + L + + + EA M +
Sbjct: 124 GFCNLGRVNEATSLFKQMVER-NVIPNKV-TFTILIDGLCKKRMISEAWLVFETMTEKGL 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D + +L++IM G PN+ YN ++ C + +D
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG--CAPNVRSYNILINGHCKSGRIDEA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M PD TY+ + + + E + EM P + + +
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + A E+ + E+ I P +L+ G+ G+L R + +
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Query: 237 ILIYDVTMQK-LKKAFYNES 255
++ Y V + LK NE+
Sbjct: 360 VVTYTVMISGLLKGGLSNEA 379
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 8/262 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN+ A+ + EM E P V Y + + +G +D ALK L MK +
Sbjct: 398 GFIKEGNINLASNVYREMCE-VGITPSTV-TYTSLIDGFCKGNNIDLALKLLNDMKRKGL 455
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+K + +D K D +L + + G G L PN +YN+++ N N+V+
Sbjct: 456 KMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG--LSPNRFIYNSMITGFKNMNNVEEA 513
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +MV G D TY + + L+K+ ++ + EM+ P I
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
L + + E A +I + ++P N L+ G G L + R +EML+R +
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633
Query: 238 -LIYDVTMQKLKKAFYNESRSM 258
+ YD+ + K N SR +
Sbjct: 634 NITYDILVNGKFKGDGNFSRDL 655
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 115/326 (35%), Gaps = 71/326 (21%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEGN++EA + F + R E + E AY F+ L AL LR M+ P
Sbjct: 52 KEGNILEAEQHFLQAKARGVELDQE---AYSIFVHLLCLKPNSGYALSLLREMRAAGWIP 108
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIG---------------------------- 94
F++ + VK + ++L D MV G
Sbjct: 109 PEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLV 168
Query: 95 -----FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG------------------ 131
L+PN + Y+ ++ C N +++ F F+ +M G
Sbjct: 169 NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKC 228
Query: 132 --------AFPDSL--------TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
F D+L T+N + L K K++E N + E+I P ++
Sbjct: 229 QSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I D A +++ +L+NG P + +L+ G G + + M +
Sbjct: 289 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDR 261
IL D T+ + K RS R
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGR 374
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F+ L L K LWD ++ G + PN++ YN ++ C ++++ + + +
Sbjct: 252 FNTLLSWLCKEGKMNEACNLWDEVIAKGIS--PNVVSYNNIILGHCRKDNINAACKVYKE 309
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ +G P+++T+ ++ + K + + FH M PT I L A
Sbjct: 310 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 369
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+++N + G +P N ++ G G ++ EM I VT
Sbjct: 370 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 429
Query: 247 LKKAF 251
L F
Sbjct: 430 LIDGF 434
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 98/225 (43%), Gaps = 13/225 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +GN+ A E+ E P V Y + + +++A +F MK +
Sbjct: 154 GYCMQGNLRSALVLVNEISES-GLVPNKV-TYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 211
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ ++ L+ +K + +++ + G + N+ +N ++ LC ++
Sbjct: 212 RSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG---LANVFTFNTLLSWLCKEGKMNEA 268
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+++ G P+ ++YN I + ++ + EM+ N + P A T+
Sbjct: 269 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN----AVTFTI 324
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
L+D + E A I++ + + ILP + + +++ GL GR
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 369
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 91/237 (38%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++ N+ A K + EM++ + P V + + + ++ A MK N
Sbjct: 293 GHCRKDNINAACKVYKEMLDN-GFTPNAV-TFTILMDGYFKKGDIENAFSIFHRMKDANI 350
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + L K S L++ V GF +P + YN ++ +++
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF--VPTCMPYNTIIDGFIKEGNINLA 408
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G P ++TY + + K + ++M + + T I
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A E+ N + G+ P N ++ G +N+ + + ++M+N I
Sbjct: 469 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 525
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G+ ++A + F EM+E+ + V+ Y + L ++ EA R M+
Sbjct: 202 GCCRQGDFLKAFRLFDEMIEKKIF--PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D K+ ++L+ M+G G L+PN++ + ++ LC +++ +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG--LLPNVVTFGILIDGLCKTDEMVSA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F M G P+ YN + + K + E + E+ K+E P + I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D E A + + + G LP + N L+ G G + +M + I
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + LD LVK +++ MV G + PN++ Y ++ C D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS--PNVVTYGTLIDGCCRQGDFLKA 212
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR FD+M+ FP + Y ++ L ++ E E+ F M + P T +
Sbjct: 213 FRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN----RR 236
+ A+E++ +L +G+LP + +L+ GL + R+F +M +
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332
Query: 237 ILIYDVTMQKLKKA 250
I +Y+ + KA
Sbjct: 333 IFVYNCLIDGYCKA 346
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A + + EM+ + +V+ + + L + ++ A KFL M
Sbjct: 272 GYCKIAHVKKALELYQEMLG--DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + + + L + ++P++ Y+ ++ LC + ++
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK--HEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G P+++TYN + + K + + +M + +P + +T I
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E A+ ++ ++ G+LP + L+ G G + R +EM
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 5/181 (2%)
Query: 65 KFFSNALDILVKLNDSTHTVQ--LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
KF N +L+ V+ LW V +++P + N V+ L D +++
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALW---VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ MV GA P+ +TY + + + + F EMI+ + PT + I L
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A ++ + +G+LP + N ++ G + + +EML +L V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299
Query: 243 T 243
T
Sbjct: 300 T 300
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 13/191 (6%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA+ EM ++ + P V Y T + + +++A++ M + P + FS
Sbjct: 386 EADGLLQEMKKK-GFLPNAV-TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D K + L+ MV G L+P+++ Y A++ + + FR +M
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKG--LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN---------CATAITM 180
G P+ T + + + L K+ ++ + F + + N C+ A+++
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSL 561
Query: 181 LLDADEPEFAI 191
EP +
Sbjct: 562 FRGISEPCICV 572
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA EM E+ P V Y + +L +VD+A+ +R M + C
Sbjct: 276 GLCNEGRIGEAMDMLEEMTEK-GIEPT-VYTYTVPISSLCDIGRVDDAINLVRSMGKKGC 333
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+++ ++ + L + + ++ M+ G L+PN + YNA++ LC
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG--LVPNTVTYNALINELCTEGRFGIA 391
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M HG ++ TYN I + L + + F++M+K+ PT + T I
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L A + E+ P E + L+ G G+L F EML I
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 2/226 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
++ T L+ L + V A + P+L F+ ++IL K V +++ +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
F+L P+ Y +++ C N +D F FD+MV G P+S+TY+ + L
Sbjct: 224 --FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E + EM + +PT I+ L D + AI + + + G P +
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++ GL G++ +ML ++ VT L E R
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGR 387
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 6/229 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T ++ ++ ++ A +FL +MK NC P + + + K +
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + PN Y A++ C +D F++M +G TYN I L K
Sbjct: 502 EMLKCGIS--PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E E F +M + QP + + I L A +I++ + + LP +
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
L+ GL G++ R E I Y + L + E RS
Sbjct: 620 YTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCR----EGRS 664
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 8/228 (3%)
Query: 29 VLAYETFLITLIRGKQVDEA-LKFLRVMKGENCFPTLKFFSNALDILV--KLNDSTHTVQ 85
+L + T + L + +V EA L F ++ + + C + S L KL+ + +
Sbjct: 197 LLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA---FE 253
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++D MV G N PN + Y+ ++ LCN + ++M G P TY +
Sbjct: 254 VFDRMVKDGCN--PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +V + N M K P+ I+ L A + E AI +++ +L+ G++P
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ N L+ L GR + + M L T ++ K +
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
ALK M+G + ++ + L ++D + +++ M+ G + P ++ YN +
Sbjct: 391 ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS--PTVVTYNTL 448
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ ++N RF M PD TY + K K+ +FF+EM+K
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
P I + + A+ ++ + ENG + N ++ GL R S+ +
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568
Query: 228 FAEEMLNRRILIYDVTMQKL 247
F +M + + +T L
Sbjct: 569 FCAKMTEQGLQPNTITYTSL 588
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 12/238 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G+ KEG + A F ER E N + Y + L +G + EA KF M +
Sbjct: 521 GYCKEGKIDVALSLF----ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P +++ ++ L K + +++ M N +PN Y +++ LC VD
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK--NCLPNAHTYTSLIYGLCQEGKVD 634
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
R + +G P TY+ + L + + +E M + P+ + +
Sbjct: 635 AAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ + + A+EI+N + G P VL+ L + R + + +L ++
Sbjct: 691 VAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A K F EM ++ H Y + + L + +VD A + C PT+ +S
Sbjct: 601 AFKIFHEMEKKNCLPNAHT--YTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTL 654
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ L + S QL + M G L P++ +Y +++ C + VD F+ M
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKG--LSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK 712
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
G P Y ++ L + E N F ++K +W
Sbjct: 713 GFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQW 749
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ +A +M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDKAVSVLNDMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTVHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L M+ G N P++I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLN--PSVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ G PD +N++ L K + + M N W+ P N T T+
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXM--NRWKCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW +L NG+ P S N+ L GL + R+ D F + + ++
Sbjct: 311 MEGFYKDGDIRN-ALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRKK 369
Query: 237 ILIYDVT 243
I+ +T
Sbjct: 370 IVPTKIT 376
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE K+ + VE + T+G +V F + ++++L L + + +
Sbjct: 82 WELMKKSDFVEDSITYGILVHGF-----------------CKNGXINKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + V + + M+ G PN +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCK--PNAHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L KN+ E + EM++ P+ + + +
Sbjct: 183 AIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN ++ G P N+L+ GL ++G+ M +
Sbjct: 243 GLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
VT L + FY +
Sbjct: 303 NLVTHNTLMEGFYKDG 318
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN+ +A K F E+ +R P V+++ T + + +D + M+ P
Sbjct: 252 KEGNICDAQKVFDEITKR-SLRPT-VVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPD 309
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K N +L+ M G L+PN +++ ++ N +D +
Sbjct: 310 VFTYSALINALCKENKMDGAHRLFYEMCERG--LIPNDVIFTTLIHGHSRNGQIDLMKES 367
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ G PD + YN + KN + N MI+ +P + T I
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCR 427
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+EI + +NGI + L+ G+ GR+ D R EML + DVT
Sbjct: 428 GGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVT 487
Query: 244 MQKLKKAF 251
+ AF
Sbjct: 488 YTMMMDAF 495
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 12/260 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE + A++ F EM ER P V+ + T + R Q+D + + M + P
Sbjct: 322 KENKMDGAHRLFYEMCER-GLIPNDVI-FTTLIHGHSRNGQIDLMKESYQKMLSKGLQPD 379
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K D + D M+ G L P+ + Y ++ C DVD
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRG--LRPDKVTYTTLIDGFCRGGDVDTALEI 437
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M +G D + ++ + + K +V + E EM++ +P + TM++D
Sbjct: 438 RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDV----TYTMMMD 493
Query: 184 A----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
A + + ++ + +G +P + NVLL GL LG++ + + MLN ++
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVP 553
Query: 240 YDVTMQKLKKAFYNESRSMR 259
D+T L + + + + +
Sbjct: 554 DDITYNTLLEGHHRHANASK 573
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 96/275 (34%), Gaps = 34/275 (12%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A+ F +VE P + +IT + + + ++ R+ + N ++ N
Sbjct: 152 SASSVFISLVE-MRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGN 210
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGF---------------------------------N 96
LD ++KLN + + ++ GF +
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L P ++ +N ++ C ++D FR M PD TY+ + L K K+
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F+EM + P + T I + + E + +L G+ P N L+ G
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
G L R + M+ R + VT L F
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGF 425
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V++A + EM+ R P+ V Y + + K L+ M+ +
Sbjct: 459 GMCKEGRVIDAERALREML-RAGMKPDDV-TYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ L KL + L D M+ +G ++P+ I YN LL ++ N
Sbjct: 517 IPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVG--VVPDDITYNT---LLEGHHRHANA 571
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + Q G D +Y + L + K H
Sbjct: 572 SKHYKQKPEIGIVADLASYKSLVNELYRASKDHR 605
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 7/232 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + M P Y + L +V +AL L M C
Sbjct: 114 GYCRYGRLDAARRLIASM-----PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRREC 168
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L+ + K + +++ D M G PN++ YN ++ +C + VD+
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCT--PNIVTYNVIINGMCREDRVDDA 226
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +++ +G PD+++Y + + L K+ +VE F EM++N P + +
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E AIE+ + + E+G N+++ + GR+ D F M
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y T L L +++D A + L M +C + F+ + + ++L
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ G PNLI +N ++ + + + + +V G D++TY+ I + L
Sbjct: 508 QQMMEHGCT--PNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ ++ E FH + +P + ++ L E + AI+ + +++ N +P E+
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ +L+ GL G L + R E+ +R +L
Sbjct: 626 TYVILIEGLAREGLLKEARYVLSELCSRGVL 656
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 109/256 (42%), Gaps = 13/256 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V +A + M + +P+ ++Y T L L R + ++A + L M +NC P
Sbjct: 324 KQGRVDDAFEFLNNM-GSYGCSPD-TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + IL + + L + M G ++ ++ YNA+V C VD+
Sbjct: 382 EVTFNTFICILCQKGLIDQAILLIEQMPEYGCSV--GIVTYNALVNGFCVQGRVDSALEL 439
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITM 180
F+ + P+++TY + L +++ EM++N+ PLN T ++
Sbjct: 440 FNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDC---PLNVVTFNVLVSF 493
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E AIE+ ++E+G P + N LL G+ + ++++ I +
Sbjct: 494 FCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLD 553
Query: 241 DVTMQKLKKAFYNESR 256
+T + E R
Sbjct: 554 TITYSSIVDVLSREDR 569
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 111/300 (37%), Gaps = 37/300 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V +A +M+ R E P V+ Y L + + +A+K L M+ + C
Sbjct: 146 GLCDRGRVGDALSLLDDMLRR-ECQPS-VVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGC 203
Query: 61 FPTLKFFS-------------NALDILVKLND---STHTVQLWDIMVGIGF--------- 95
P + ++ +A IL +L+ TV ++ G+
Sbjct: 204 TPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEV 263
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
N +PN + ++ +V C V+ D+M HG ++ N++ +
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSIC 323
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V + F + M P ++ T + L A E A E+ N ++ P E
Sbjct: 324 KQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEV 383
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
+ N + L G + E+M + VT L F + R S + F+SL
Sbjct: 384 TFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +V+ + + + V+EA++ ++ M C P L F+ LD + + +S ++
Sbjct: 481 PLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L +V G +L + I Y+++V +L + ++ + F + G P ++ YN I
Sbjct: 541 LLHGLVSKGISL--DTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598
Query: 146 LIKNKKVHEVENFFHEMIKNEWQP 169
L K + +FF M+ N P
Sbjct: 599 LCKRCETDRAIDFFAHMVSNSCMP 622
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 57/153 (37%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y ++ LC+ V + D M+ P +TY ++ E + K+ +
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKV 194
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM P + I + D + A +I N + G P S +L GL
Sbjct: 195 LDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCA 254
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + +VT L + F
Sbjct: 255 AKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 25/269 (9%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A+ EM+ER + P+ V++Y T + R +++++A + M + P +
Sbjct: 427 GRMEDASGLLQEMIER-GFIPD-VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S+ + L K L+ M+ +G L P+ + Y +++ C D+D R D
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLG--LPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ G PD +TYN++ K + E + +++ E P + T T++ + +
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI---TYNTLIDNCN 599
Query: 186 EPEF------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
EF A + +L+ G E NV++ G +G +
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+EML+ + VT+ L K+ Y+E +
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN +A EMV+ +P +V+ Y T + ++ + ++ A++FL M+
Sbjct: 317 GYCNVGNFHQALVLHAEMVKN-GLSP-NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV------------ 108
P + ++ +D + Q+ MV GF P +I YNA++
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT--PTIITYNALINGHCILGRMEDA 432
Query: 109 -GLL----------------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
GLL C N +++ F+ +MV G PD TY+ + +
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K +++ EV + F EM+ P + + I + + A+ + + +++ G P
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ NVL+ G R + +R ++L + ++T L
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 4/223 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F EMVE +V Y + ++ L F M+ C P + ++
Sbjct: 187 AEGIFKEMVE--SGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTI 244
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+D KL +L +M G N PNLI YN V+ LC + ++M
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
PD +T+N + H+ EM+KN P + T I + A A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+E + + + G+ P + L+ G G L + +EM+
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 109/289 (37%), Gaps = 35/289 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ FGEM ER P +V+ Y T + + +++ EA K LR+M +
Sbjct: 212 GFCTAGNLEMGLFFFGEM-ERNGCLP-NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-------IGFN----------------- 96
P L ++ ++ L + T ++ + M + FN
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L PN++ Y ++ +C +++ F DQM G P+ TY + +
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ + + EM++N + PT + I E A + ++E G +P
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
S + ++ G L + EM+ + I T L + + R
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-----GFNLMPNLIMYNAVV-GLL 111
+N + K S D++VK S V L + + I + MP ++ YNA++ ++
Sbjct: 122 KNSYYQCKSSSAVFDLVVK---SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI 178
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
V F +MV G P+ TYN++ + FF EM +N P
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNV 238
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ T I + A ++ + G+ P S NV++ GL G++ + EE
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE 298
Query: 232 MLNRRILIYDVTMQKLKKAFYN 253
M RR + VT L + N
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCN 320
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG EA + F E +++ + + Y + L R ++ DEA+K L M + C
Sbjct: 365 GLFKEGKSEEAMRLFKESMDK--GCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGC 422
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P FS+ + ++ +S +++W M I N N + Y+ ++ LC + V
Sbjct: 423 APNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKI--NCAENEVCYSVLIHGLCKDGKVMEA 480
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM--IKNEWQPTPLNCATAI 178
+ +M+ G PD + Y+ + + L V E ++EM ++ + QP +
Sbjct: 481 MMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILF 540
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNR 235
L A+++ N +L+ G P + N+ L LR L D +F +E++ R
Sbjct: 541 NALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVR 598
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVD 118
C PT+K F++ L+++++ ++ ++ +VG N++PN++ +N ++ +C VD
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVD 198
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
N F +M PD+ TY + + L K ++ E + EM P+P I
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + ++ + + G +P E + N L+ GL G+L + M++ + +
Sbjct: 259 NGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV 318
Query: 239 IYDVTMQKLKKAFYNESRSM 258
+VT + + R++
Sbjct: 319 PNEVTYGTIINGLVKQGRAL 338
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 92/233 (39%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ K M + P V Y T + L ++D+AL L M C
Sbjct: 260 GLCKKGDFTRVTKLVDNMFLK-GCVPNEV-TYNTLIHGLCLKGKLDKALSLLDRMVSSKC 317
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LVK + ++ +M G+ + N +Y+ +V L +
Sbjct: 318 VPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY--IVNEYVYSVLVSGLFKEGKSEEA 375
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F + + G +++ Y+ + + L +++K E EM P ++ +
Sbjct: 376 MRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKG 435
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ AIE+W + + E +VL+ GL G++ + +ML
Sbjct: 436 FFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKML 488
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 25/269 (9%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A+ EM+ER + P+ V++Y T + R +++++A + M + P +
Sbjct: 427 GRMEDASGLLQEMIER-GFIPD-VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S+ + L K L+ M+ +G L P+ + Y +++ C D+D R D
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLG--LPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ G PD +TYN++ K + E + +++ E P + T T++ + +
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI---TYNTLIDNCN 599
Query: 186 EPEF------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
EF A + +L+ G E NV++ G +G +
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+EML+ + VT+ L K+ Y+E +
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 4/223 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F EMVE +V Y + ++ L F M+ C P + ++
Sbjct: 187 AEGIFKEMVE--SGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTI 244
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+D KL +L +M G N PNLI YN V+ LC + ++M
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
PD +T+N + H+ EM+KN P + T I + A A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+E + + + G+ P + L+ G G L + +EM+
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN +A EMV+ +P +V+ Y T + ++ + ++ A++FL M+
Sbjct: 317 GYCNVGNFHQALVLHAEMVKN-GLSP-NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV------------ 108
P + ++ +D + Q+ MV GF P +I YNA++
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT--PTIITYNALINGHCILGRMEDA 432
Query: 109 -GLL----------------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
GLL C N +++ F+ +MV G PD TY+ + +
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K +++ EV + F EM+ P + + I + + A+ + + +++ G P
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ NVL+ G R + +R ++L + ++T L
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 121/319 (37%), Gaps = 70/319 (21%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ FGEM ER P +V+ Y T + + +++ EA K LR+M +
Sbjct: 212 GFCTAGNLEMGLXFFGEM-ERNGCLP-NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-------IGFN----------------- 96
P L ++ ++ L + T ++ + M + FN
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L PN++ Y ++ +C +++ F DQM G P+ TY + +
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPL--------NC------------------------- 174
+ + + EM++N + PT + +C
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 175 --ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+T I+ E E A ++ ++ GI P A+ + L+ GL RL +V +EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509
Query: 233 LNRRILIYDVTMQKLKKAF 251
L+ + +VT L A+
Sbjct: 510 LSLGLPPDEVTYTSLINAY 528
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-----GFNLMPNLIMYNAVV-GLL 111
+N + K S D++VK S V L + + I + MP ++ YNA++ ++
Sbjct: 122 KNSYYQCKSSSAVFDLVVK---SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI 178
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
V F +MV G P+ TYN++ + FF EM +N P
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNV 238
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ T I + A ++ + G+ P S NV++ GL G++ + EE
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE 298
Query: 232 MLNRRILIYDVTMQKLKKAFYN 253
M RR + VT L + N
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCN 320
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 8/262 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN+ A+ + EM E P V Y + + +G +D ALK L MK +
Sbjct: 516 GFIKEGNINLASNVYREMCE-VGITPSTV-TYTSLIDGFCKGNNIDLALKLLNDMKRKGL 573
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+K + +D K D +L + + G G L PN +YN+++ N N+V+
Sbjct: 574 KMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG--LSPNRFIYNSMITGFKNMNNVEEA 631
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +MV G D TY + + L+K+ ++ + EM+ P I
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
L + + E A +I + ++P N L+ G G L + R +EML+R +
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 751
Query: 238 -LIYDVTMQKLKKAFYNESRSM 258
+ YD+ + K N SR +
Sbjct: 752 NITYDILVNGKFKGDGNFSRDL 773
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 115/326 (35%), Gaps = 71/326 (21%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+EGN++EA + F + R E + E AY F+ L AL LR M+ P
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQE---AYSIFVHLLCLKPNSGYALSLLREMRAAGWIP 226
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIG---------------------------- 94
F++ + VK + ++L D MV G
Sbjct: 227 PEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLV 286
Query: 95 -----FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG------------------ 131
L+PN + Y+ ++ C N +++ F F+ +M G
Sbjct: 287 NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKC 346
Query: 132 --------AFPDSL--------TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
F D+L T+N + L K K++E N + E+I P ++
Sbjct: 347 QSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I D A +++ +L+NG P + +L+ G G + + M +
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDR 261
IL D T+ + K RS R
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGR 492
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F+ L L K LWD ++ G + PN++ YN ++ C ++++ + + +
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGIS--PNVVSYNNIILGHCRKDNINAACKVYKE 427
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ +G P+++T+ ++ + K + + FH M PT I L A
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+++N + G +P N ++ G G ++ EM I VT
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547
Query: 247 LKKAF 251
L F
Sbjct: 548 LIDGF 552
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 98/225 (43%), Gaps = 13/225 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +GN+ A E+ E P V Y + + +++A +F MK +
Sbjct: 272 GYCMQGNLRSALVLVNEISES-GLVPNKV-TYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ ++ L+ +K + +++ + G + N+ +N ++ LC ++
Sbjct: 330 RSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG---LANVFTFNTLLSWLCKEGKMNEA 386
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+++ G P+ ++YN I + ++ + EM+ N + P A T+
Sbjct: 387 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN----AVTFTI 442
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
L+D + E A I++ + + ILP + + +++ GL GR
Sbjct: 443 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 91/237 (38%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++ N+ A K + EM++ + P V + + + ++ A MK N
Sbjct: 411 GHCRKDNINAACKVYKEMLDN-GFTPNAV-TFTILMDGYFKKGDIENAFSIFHRMKDANI 468
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + L K S L++ V GF +P + YN ++ +++
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF--VPTCMPYNTIIDGFIKEGNINLA 526
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G P ++TY + + K + ++M + + T I
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 586
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A E+ N + G+ P N ++ G +N+ + + ++M+N I
Sbjct: 587 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G+ ++A + F EM+E+ + V+ Y + L ++ EA R M+
Sbjct: 202 GCCRQGDFLKAFRLFDEMIEKKIF--PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D K+ ++L+ M+G G L+PN++ + ++ LC +++ +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG--LLPNVVTFGILIDGLCKTDEMVSA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F M G P+ YN + + K + E + E+ K+E P + I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D E A + + + G LP + N L+ G G + +M + I
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + LD LVK +++ MV G + PN++ Y ++ C D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS--PNVVTYGTLIDGCCRQGDFLKA 212
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR FD+M+ FP + Y ++ L ++ E E+ F M + P T +
Sbjct: 213 FRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN----RR 236
+ A+E++ +L +G+LP + +L+ GL + R+F +M +
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332
Query: 237 ILIYDVTMQKLKKA 250
I +Y+ + KA
Sbjct: 333 IFVYNCLIDGYCKA 346
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A + + EM+ + +V+ + + L + ++ A KFL M
Sbjct: 272 GYCKIAHVKKALELYXEMLG--DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + + + L + ++P++ Y+ ++ LC + ++
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK--HEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G P+++TYN + + K + + +M + +P + +T I
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E A+ ++ ++ G+LP + L+ G G + R +EM
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 87/242 (35%), Gaps = 48/242 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EMV + P+ V+AY + + EA + + M+
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIK-GLLPD-VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN-----------LMPNLIMYNAVVG 109
P + S +D L K + ++L+ G PN +MY A++
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + + +FF M G PD +F C++ ++ F M +
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPD------VFTCIVI------IQGHFRAMHLRD--- 609
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
M+L AD IL+ GI+P + VL G G L F
Sbjct: 610 ---------VMMLQAD-----------ILKMGIIPNSSVYRVLAKGYEESGYLKSALSFC 649
Query: 230 EE 231
E
Sbjct: 650 GE 651
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 5/181 (2%)
Query: 65 KFFSNALDILVKLNDSTHTVQ--LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
KF N +L+ V+ LW V +++P + N V+ L D +++
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALW---VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ MV GA P+ +TY + + + + F EMI+ + PT + I L
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A ++ + +G+LP + N ++ G + + EML +L V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVV 299
Query: 243 T 243
T
Sbjct: 300 T 300
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G+ ++A + F EM+E+ + V+ Y + L ++ EA R M+
Sbjct: 202 GCCRQGDFLKAFRLFDEMIEKKIF--PTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D K+ ++L+ M+G G L+PN++ + ++ LC +++ +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG--LLPNVVTFGILIDGLCKTDEMVSA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+F M G P+ YN + + K + E + E+ K+E P + I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D E A + + + G LP + N L+ G G + +M + I
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + LD LVK +++ MV G + PN++ Y ++ C D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS--PNVVTYGTLIDGCCRQGDFLKA 212
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR FD+M+ FP + Y ++ L ++ E E+ F M + P T +
Sbjct: 213 FRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN----RR 236
+ A+E++ +L +G+LP + +L+ GL + R+F +M +
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332
Query: 237 ILIYDVTMQKLKKA 250
I +Y+ + KA
Sbjct: 333 IFVYNCLIDGYCKA 346
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A + + EM+ + +V+ + + L + ++ A KFL M
Sbjct: 272 GYCKIAHVKKALELYQEMLG--DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + + + L + ++P++ Y+ ++ LC + ++
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK--HEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G P+++TYN + + K + + +M + +P + +T I
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E A+ ++ ++ G+LP + L+ G G + R +EM
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 90/243 (37%), Gaps = 48/243 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EMV + P+ V+AY + + EA + + M+
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIK-GLLPD-VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN-----------LMPNLIMYNAVVG 109
P + S +D L K + ++L+ G PN +MY A++
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + + +FF M G PD +F C++ ++ F M +
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPD------VFTCIVI------IQGHFRAMHLRD--- 609
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
M+L AD IL+ GI+P + VL G G L R +
Sbjct: 610 ---------VMMLQAD-----------ILKMGIIPNSSVYRVLAKGYEESGYLKSALRCS 649
Query: 230 EEM 232
E++
Sbjct: 650 EDL 652
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 5/181 (2%)
Query: 65 KFFSNALDILVKLNDSTHTVQ--LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
KF N +L+ V+ LW V +++P + N V+ L D +++
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALW---VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ MV GA P+ +TY + + + + F EMI+ + PT + I L
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A ++ + +G+LP + N ++ G + + +EML +L V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299
Query: 243 T 243
T
Sbjct: 300 T 300
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 18 MVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
MVER + V++Y T + + ++ + + M G+ P + F+ +D ++
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376
Query: 77 LNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
STH V+ L D M + ++P+ I Y AVV LC N VD F MV +G PD
Sbjct: 377 -EGSTHVVKKLLDEMTKM--RVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPD 433
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
++YN + K +V + + F EM P + + L+ + A +W+
Sbjct: 434 VISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWD 493
Query: 196 YILENG 201
++E G
Sbjct: 494 QMMERG 499
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V +A K M R P+ ++ Y L VDEA++ + M+
Sbjct: 233 GFCRMGRVDKAMKIKAFM-SRTGCVPD-LVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290
Query: 61 FPTLKFFSNALDILVKLN--DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P L ++ L K N D H + + + M +++ YN V+ C
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQT----KGMCDVVSYNTVITAFCKARRTR 346
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ F++M G PD +T+N++ + ++ H V+ EM K P + +
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVV 406
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + + A ++ ++ENG+ P S N LL G R+ D +EM ++ +
Sbjct: 407 DHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLY 466
Query: 239 IYDVTMQ 245
+VT +
Sbjct: 467 PDEVTYK 473
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 2/193 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF-FSNALDILVKLNDSTHTVQLWDIM 90
Y F+ L+R ++ A + R F L F +S + L ++ + + ++
Sbjct: 48 YNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLL 107
Query: 91 VGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ + +P++ +N + LLC N ++ F M G PD ++Y +I + L
Sbjct: 108 LDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNA 167
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ E + +I P C + L + A E+ +++ G+
Sbjct: 168 KRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVY 227
Query: 210 NVLLVGLRNLGRL 222
N L+ G +GR+
Sbjct: 228 NALIDGFCRMGRV 240
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
H LAY + + L++ +++A+ M NC ++ + +L++ + H +
Sbjct: 9 HRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLR-HSRLHLAHHY 67
Query: 88 --DIMVGIGFNLMPNLIMYNAVVGLLC---NNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++ GF+L+P Y+ + LC NN ++ + M G PD +N
Sbjct: 68 YRRHVIPRGFSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTY 125
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L + ++ FH M P ++ I L +A + A ++W +++ G+
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185
Query: 203 LPLEASANVLLVGLRNLGRL 222
P + L+VGL + GR+
Sbjct: 186 SPDYKACVALVVGLCSGGRV 205
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 88/246 (35%), Gaps = 39/246 (15%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y + L K+ DEA K R + + P K + ++V L ++
Sbjct: 154 VVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK---ACVALVVGLCSGGRVDLAYE 210
Query: 89 IMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++VG I + N ++YNA++ C VD + M G PD +TYN++
Sbjct: 211 LVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCC 270
Query: 148 KNKKVHEVENFFHEMIKNEWQP------------------------------TPLNCA-- 175
+ V E M ++ +P T C
Sbjct: 271 EEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVV 330
Query: 176 ---TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T IT A E++ + GI P + N+L+ G V++ +EM
Sbjct: 331 SYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390
Query: 233 LNRRIL 238
R+L
Sbjct: 391 TKMRVL 396
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + EA + F EMV + + P+ L Y + G +VD ALK + MK C
Sbjct: 288 GLCGSGRLKEAIELFEEMVSKDQILPD-ALTYNALINGFCHGXKVDRALKIMEFMKKNGC 346
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ K +++D M +G L P+ + Y ++ C VD
Sbjct: 347 NPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG--LKPDTVGYTTLINFFCRAGRVDEA 404
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
M + D++T+N+I L + + E + ++ LN A+
Sbjct: 405 MELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERL---PYEGVYLNKASYRIV 461
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E + A ++ +L G+LP A++N LLV L G++ D
Sbjct: 462 LNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 509
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 45 VDEALKFLRVMKGEN-CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+D A + + MK + +P L +S ++ L ++L++ MV ++P+ +
Sbjct: 259 IDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKD-QILPDALT 317
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ C+ VD + + M +G P+ Y+ + K ++ E + F EM
Sbjct: 318 YNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK 377
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+P + T I A + A+E+ + EN + NV+L GL GR
Sbjct: 378 SLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFE 437
Query: 224 DVRRFAEEM 232
+ E +
Sbjct: 438 EAXGMLERL 446
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 13/206 (6%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM----------PNLIMYNAVVGLL 111
P+LK S L++LV+ N S+ T + DI F ++ PNLI Y+ ++ L
Sbjct: 232 PSLKAISTCLNLLVESNQSSITAKNGDI--DSAFEVVEEMKKSHVSYPNLITYSTLINGL 289
Query: 112 CNNNDVDNVFRFFDQMVFHGA-FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
C + + F++MV PD+LTYN + KV M KN P
Sbjct: 290 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPN 349
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
N + + E A E+++ + G+ P L+ GR+ + +
Sbjct: 350 VFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLK 409
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESR 256
+M + VT + E R
Sbjct: 410 DMXENKCRADTVTFNVILGGLCREGR 435
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T L L + K+ L M E C F N + KL+ V+++D +
Sbjct: 165 TYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAI 224
Query: 91 VGI--------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM-VFHGAFPDSLTYNM 141
I + NL++ + + N D+D+ F ++M H ++P+ +TY+
Sbjct: 225 XPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYST 284
Query: 142 IFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L + ++ E F EM+ K++ P L I + + A++I ++ +N
Sbjct: 285 LINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKN 344
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G P + + L+ G GRL + + +EM
Sbjct: 345 GCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM 376
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G+V A K FG M + + Y + L+ + A+ +R M+ E P
Sbjct: 255 RAGDVKGAAKLFGFM--QLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 312
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D LV+ ++ + M G N +Y+ V+ C + ++D +
Sbjct: 313 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAW--NEFVYSTVITGFCKSGEIDCALKV 370
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ MV P+ + Y+ + L K+ E E F EMI ++ P + + I
Sbjct: 371 WEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFK 430
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A+ +W ++ G +P S ++L+ GL N+GRL D + ML+R
Sbjct: 431 IGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDR 482
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 4/249 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + E++ ++ P+ Y T + L +VD+A+ + M + + F+
Sbjct: 192 ALRILHEIIPGWDLAPDK-FTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAEAFNPV 249
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L +++ D +L+ M G +P YN +V L +M
Sbjct: 250 LRAMLRAGDVKGAAKLFGFMQLKG--CVPTTATYNVLVHGLLVCGRAGAAMGVMRRMERE 307
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P +TY + + L++ +V + EM +N +T IT + E + A
Sbjct: 308 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCA 367
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++W ++ + + P + ++ GL N G++++ EM++ + +T + +
Sbjct: 368 LKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQG 427
Query: 251 FYNESRSMR 259
++ + R
Sbjct: 428 YFKIGDTSR 436
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA F EM+ + P +++ Y + + + AL M G C P
Sbjct: 397 GKMTEAELLFREMIHS-KCAP-NIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAV 454
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S ++ L + + +W M+ G P+ I Y +++ LC + VD R F
Sbjct: 455 SYSILINGLCNVGRLKDAMMVWKHMLDRG--CAPDTIAYTSMIKGLCVSGMVDGGLRLFY 512
Query: 126 QMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
M+ G A PD ++YN++ + L+ K + + + M+ P + C
Sbjct: 513 DMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTC 562
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L+R +V +A K M+ +S + K + +++W+
Sbjct: 313 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWE 372
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV + PN+++Y+A++G L N + F +M+ P+ +TY I + K
Sbjct: 373 AMVA--SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFK 430
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + EMI P ++ + I L + + A+ +W ++L+ G P +
Sbjct: 431 IGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIA 490
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEML 233
++ GL G + R +ML
Sbjct: 491 YTSMIKGLCVSGMVDGGLRLFYDML 515
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 4/255 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA+K EM R V+ Y + + R V +A + L M N
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVR--GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ L L+K + V L +V G+ +P+++ YN ++ LC N V
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY--VPDVVTYNTLIDGLCKANRVREA 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G FP+ +T + L + +V + + EM + P + + I
Sbjct: 466 CDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L +D + A + + + G+ + + L+V + + GR+++ +EM+ R L
Sbjct: 526 LCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585
Query: 241 DVTMQKLKKAFYNES 255
T + L++A + S
Sbjct: 586 GSTSKTLEEAAMSNS 600
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 13/272 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+V EA + M + V+ Y + + L +V EA + L+ M +C
Sbjct: 213 GICKDGDVEEALEILDGM--KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SC 267
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L F+ LD K +++ + M N++P++I Y +V LC V
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR--ENILPDVITYTILVNGLCRVGQVQVA 325
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +++V G PD + Y + + L K+ ++ E EM + + ++ ++
Sbjct: 326 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSG 385
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
A A EI ++ ++P + N++L GL G +S +++ R
Sbjct: 386 YCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
++ Y+ + L KA N R D D + R
Sbjct: 446 VVTYNTLIDGLCKA--NRVREACDLADEMASR 475
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EM R P+ V+ Y + L R QV A L + +
Sbjct: 280 GFCKAGMLPRALEVLEEMC-RENILPD-VITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D L K + +L M G ++MY+++V C +V
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCR--TGVVMYSSLVSGYCRAGNVHKA 395
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+MV P TYN++ LIK+ + + + +++ + P + T I
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L A+ A ++ + + G P + + ++ GL +GR+ D EM +R
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 237 ILIYDVTMQKLKKA 250
+++Y + L K+
Sbjct: 516 VVVYTSLIDGLCKS 529
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 99/277 (35%), Gaps = 41/277 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + F ++ F P+ V + + L + D+A+K M+
Sbjct: 71 GNCKAGQAMRALE-FLRALDEFSVAPD-VYIFNVLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA-------------- 106
P + ++ + L K + +L + M+ G P+++ YN
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188
Query: 107 ---------------------VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+V +C + DV+ D M G PD +TYN I
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L KV E M P + T + A A+E+ + ILP
Sbjct: 249 LCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ +L+ GL +G++ EE++ R+ I DV
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIV-RQGYIPDV 341
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+++ LDILVK T +++ ++ G + PNL+ + ++ C F
Sbjct: 30 YNHLLDILVKSGHHFRTGKVYKDLLHSGCS--PNLVTFKILIRGNCKAGQAMRALEFLRA 87
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
+ PD +N++ L K+ + F M + +P + T I+ L +
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147
Query: 187 PEFAIEIWNYILENG--ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E A E+ ++ G P + N L+ R+ + F E+M
Sbjct: 148 LEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 112 GLCKEANLDRAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 169
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 170 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVEKA 227
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 228 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 285
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 286 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 345
Query: 239 IYDVT 243
+ +T
Sbjct: 346 LTKIT 350
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 35/187 (18%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ LC ++D + M+ G P++ YN + L+ K + F EM
Sbjct: 106 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 165
Query: 164 KNEWQPTPLNCATAI-------------------------------TMLLDA----DEPE 188
PT + T I +ML+ + E
Sbjct: 166 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVE 225
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+++WN + G P N+L+ GL ++G++ +M + V+ L
Sbjct: 226 KALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLM 285
Query: 249 KAFYNES 255
+ FY +
Sbjct: 286 EGFYKDG 292
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 35/154 (22%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ LC ++D + M+ G P++ YN + L+ K + F EM
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 164 KNEWQPTPLNCATAI-------------------------------TMLLDA----DEPE 188
PT + T I +ML+ + E
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A+++WN + G P N+L+ GL ++G++
Sbjct: 252 KALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + EA + F EMV + + P+ L Y + G++VD ALK + MK C
Sbjct: 245 GLCGSGRLKEAIELFEEMVSKDQILPD-ALTYNALINGFCHGEKVDRALKIMEFMKKNGC 303
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ K +++D M +G L P+ + Y ++ C VD
Sbjct: 304 NPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG--LKPDTVGYTTLINFFCRAGRVDEA 361
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
M + D++T+N+I L + + E + ++ LN A+
Sbjct: 362 MELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL---PYEGVYLNKASYRIV 418
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E + A ++ +L G+LP A++N LLV L G++ D
Sbjct: 419 LNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 466
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 45 VDEALKFLRVMKGEN-CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+D A + + MK + +P L +S ++ L ++L++ MV ++P+ +
Sbjct: 216 IDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKD-QILPDALT 274
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ C+ VD + + M +G P+ Y+ + K ++ E + F EM
Sbjct: 275 YNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK 334
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+P + T I A + A+E+ + EN + NV+L GL GR
Sbjct: 335 SLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFE 394
Query: 224 DVRRFAEEM 232
+ R E +
Sbjct: 395 EARGMLERL 403
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENC------------------------------ 60
Y T L L + K+ L M E C
Sbjct: 95 TYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAI 154
Query: 61 ------FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
P+LK S L++LV+ N T + + NL PN ++N +V C N
Sbjct: 155 RPIVREKPSLKAISTCLNLLVESNQVDLTRKFL-LNSKKSLNLEPNTCIFNILVKHHCKN 213
Query: 115 NDVDNVFRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPL 172
D+D+ F ++M H ++P+ +TY+ + L + ++ E F EM+ K++ P L
Sbjct: 214 GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDAL 273
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I ++ + A++I ++ +NG P + + L+ G GRL + + +EM
Sbjct: 274 TYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM 333
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 8/239 (3%)
Query: 31 AYETFLITLIRGKQVDEALKFL-RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
A T L L+ QVD KFL K N P F+ + K D ++ +
Sbjct: 166 AISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEE 225
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA-FPDSLTYNMIFECLIK 148
M + PNLI Y+ ++ LC + + F++MV PD+LTYN +
Sbjct: 226 MKKSHVS-YPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCH 284
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+KV M KN P N + + E A E+++ + G+ P
Sbjct: 285 GEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG 344
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKL-KKAFYNESRSMRDRF 262
L+ GR+ + ++M + + ++V + L ++ + E+R M +R
Sbjct: 345 YTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 403
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ N +EA F +M+ R +P+ ++++ + + R +D+AL + R MK P
Sbjct: 302 RNNNFLEAKDIFSDMLHR-GVSPD-LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ + + +++ D M+ G L +++ YN ++ LC + +
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL--DVVAYNTILNGLCKKKLLADANAL 417
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G PD T+ + K + + + F M + +P + I
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCK 477
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E E A E+WN ++ I P S +L+ G NLG +S+ R +EM+ + I VT
Sbjct: 478 TTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT 537
Query: 244 MQKLKKAF 251
+ K +
Sbjct: 538 CNTVIKGY 545
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 12/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK----QVDEALKFLRVMK 56
G K+ + +AN F EMVER V + TF TLI G + +AL +M
Sbjct: 404 GLCKKKLLADANALFDEMVER-----GVVPDFCTF-TTLIHGHCKEGNMGKALSLFGIMT 457
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+N P + ++ +D K + +LW+ M I + PN I Y +V CN
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM--ISRKIFPNHISYAILVNGYCNLGF 515
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FR +D+M+ G P +T N + + ++ + + + F +MI P + T
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + + + A + N + G+ P + NV+L G GR+ + +M+ R
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 237 I 237
I
Sbjct: 636 I 636
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEGN+ +A FG M ++ P+ ++ Y + + ++++A + M
Sbjct: 439 GHCKEGNMGKALSLFGIMTQK-NIKPD-IVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP ++ ++ L + +LWD M+ G + P L+ N V+ C + D+
Sbjct: 497 FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG--IKPTLVTCNTVIKGYCRSGDLSKA 554
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G PDS+TYN + +K + + + ++M QP + +
Sbjct: 555 DEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A I ++E GI P ++ L+ G + L + RF +EML R
Sbjct: 615 FCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 4/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V A F EM+ +P+ Y T L+ R EA M
Sbjct: 264 GLCKKGRYVRAKGVFNEMLS-IGLSPDTT-TYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L FS+ + + + + + M G L+P+ ++Y ++ C N +
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG--LVPDNVIYTILINGYCRNGMMSEA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M+ G D + YN I L K K + + F EM++ P T I
Sbjct: 380 LEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ ++ + + I P + N+L+ G + EM++R+I
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Query: 241 DVTMQKLKKAFYN 253
++ L + N
Sbjct: 500 HISYAILVNGYCN 512
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y T + R + EA + + M G+ PTL ++ ++ L K +++
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ IG L P+ YN ++ C NN+ F M+ G PD ++++ + +
Sbjct: 280 EMLSIG--LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N + + +F +M + P + I A+EI + +LE G +
Sbjct: 338 NGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N +L GL L+D +EM+ R ++
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVV 427
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + ++D+ FL M+ + F + ++ ++ + ++ + M G G L
Sbjct: 194 ALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG--L 251
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P L YNAV+ LC F++M+ G PD+ TYN + +N E ++
Sbjct: 252 KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD 311
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F +M+ P ++ ++ I + + A+ + + +G++P +L+ G
Sbjct: 312 IFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYC 371
Query: 218 NLGRLSDVRRFAEEMLNR 235
G +S+ ++ML +
Sbjct: 372 RNGMMSEALEIRDKMLEQ 389
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L ++ + + ++ ++++E ++++ + ++ ++ L LVK+ ++++
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ G L N+ N +V LC ++ +D+V F M G F D +TYN + +
Sbjct: 176 IARSGIEL--NVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E + M +PT I L A ++N +L G+ P +
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293
Query: 210 NVLLV 214
N LLV
Sbjct: 294 NTLLV 298
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ +A++ G+M+ E + Y T + ++G+ +D+A + M+ +
Sbjct: 544 GYCRSGDLSKADEFLGKMIS--EGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ + + M+ G + P+ Y ++ + +++
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGID--PDRSTYTTLINGYVSQDNLKEA 659
Query: 121 FRFFDQMVFHGAFPD 135
FRF D+M+ G PD
Sbjct: 660 FRFHDEMLQRGFVPD 674
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 9/272 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG + A MVE+ P + Y T + +G D A + + MK E
Sbjct: 223 GYCREGKLARAEMLLVRMVEQ-GLKP-NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF 280
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K ++ + G + I Y ++ C +
Sbjct: 281 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF--DKITYTILITEHCKQGHITYA 338
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+MV +G PD Y + + +++ E + FF + + PT + I
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ ++ +++NG + L+ GL RL + + E ML++R++
Sbjct: 399 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 458
Query: 241 DVTMQKLKKAFYNESR-----SMRDRFDSLER 267
+VT L + + S+ DR D ++
Sbjct: 459 EVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQ 490
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 6/186 (3%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R K V E F R M P + ++ +D L K + + MVG G L PN
Sbjct: 123 RFKDVSE---FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG--LKPN 177
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFF 159
+ + ++ LC + FR F +++ ++ P+ TY ++ + K+ E
Sbjct: 178 VYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL 237
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M++ +P T I + A E+ N + + G LP + N ++ G
Sbjct: 238 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 297
Query: 220 GRLSDV 225
G++ +
Sbjct: 298 GKIQEA 303
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G + AL+ M C PT + N L
Sbjct: 210 EMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLG 269
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ I YN V LC N V + + D MV G PD
Sbjct: 270 RVEDALGYIQQE---IANGFE--PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN++ CL KN ++ E + ++M++ P T I L + E A+++
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ G+ P + N+L+ L +G R EEM + +VT L
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ A + M+E +P V + + +V++AL +++
Sbjct: 229 GFVEEGSIKAALRVKARMLE-MGCSPTKV-TVNVLINGYCKLGRVEDALGYIQQEIANGF 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L + H +++ D+MV G + P++ YN VV LC N ++
Sbjct: 287 EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD--PDVFTYNIVVNCLCKNGQLEEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QMV G PD T+N + L ++ E + ++ P I
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L +P+ A+ ++ + +G P E + N L+ L +LG+L +EM R
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFD 263
+ Y+ + L KK E+ + D+ D
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMD 492
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 35/251 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +MVER P+ + + T ++ L G +++EAL R + + P
Sbjct: 337 KNGQLEEAKGILNQMVER-GCLPD-ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN--------LMPNL-------------- 101
+ F+ ++ L K+ D ++L++ M G L+ NL
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454
Query: 102 -----------IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ YN ++ LC ++ FDQM G +++T+N + + L K+K
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + +MI QP + + +T + + A +I + NG +
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574
Query: 211 VLLVGLRNLGR 221
L+ GL GR
Sbjct: 575 TLINGLCKAGR 585
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ A + F EM + P+ V Y T + L ++ +AL L+ M+ C +
Sbjct: 407 KVGDPQLALRLFEEM-KSSGCTPDEV-TYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K +++D M G + N I +N ++ LC + +D+ +
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR--NAITFNTLIDGLCKDKRIDDANQL 522
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ G P+++TYN I K + + + M N ++ + T I L
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCK 582
Query: 184 ADEPEFAIEI 193
A + A+++
Sbjct: 583 AGRTQVALKL 592
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 62/137 (45%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F + + ++YN ++ +L + + + + +M G PD +T+N + + L + +V
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
EM + P T + ++ + A+ + +LE G P + + NVL+
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263
Query: 215 GLRNLGRLSDVRRFAEE 231
G LGR+ D + ++
Sbjct: 264 GYCKLGRVEDALGYIQQ 280
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 3/211 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T + L + +++EA + M + F+ +D L K Q
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L M+ G L PN I YN+++ C D+ M +G D +TY +
Sbjct: 522 LISQMISEG--LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLING 579
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M + TP I L + A+ ++ + E G P
Sbjct: 580 LCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPD 639
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL R G + + F EM+++
Sbjct: 640 AFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/139 (17%), Positives = 52/139 (37%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P+++ +N ++ LC + V ++M G PD T+ + + ++ +
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
M++ PT + I E A+ + NG P + + N + G
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299
Query: 216 LRNLGRLSDVRRFAEEMLN 234
L G + + + M+
Sbjct: 300 LCQNGHVGHALKVMDVMVQ 318
>gi|357501695|ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496151|gb|AES77354.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 821
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 16/275 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ G+V + EMV+R + P+ V ++ + + + +AL+ L M+
Sbjct: 225 GFKETGDVTSVELFYHEMVKR-GFKPDSV-SFGIRIDAYCKKGRFGDALRLLEEMESRK- 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ----LWDIMVGIGF-NLMPNLIMYNAVVGLLCNNN 115
F +++ + L VQ W + I NL+ + +YNA++ L N
Sbjct: 282 ------FVVSVETITTLIHGAGLVQNPGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNR 335
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
DV + D M+ PD +TY+ IF L+K++ + V + +M K ++ P
Sbjct: 336 DVVSALSLMDGMIEKQILPDGVTYHTIFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVV 395
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++ +WNY++E G P + ++L+ GL + G + + +++ L R
Sbjct: 396 VLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLER 455
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
I L++ +SR + D+ L++ K
Sbjct: 456 GRYISSTAFLMLER-LLKQSRDV-DKLKELDQMIK 488
>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
Length = 499
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G ++EA + F EM+E+ P+ +L Y + R QVD+A MK +C
Sbjct: 232 GLCRGGKMMEAFELFEEMIEKDRIVPDQLL-YNVIIDGFCRLGQVDKARAIFGFMKKNDC 290
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ K D +++ M G P+ + Y A++G LC + VD
Sbjct: 291 EPNAFNYATLINGHCKKADIEAARSVFEEMRNAGVE--PDAVSYTALIGCLCRHGSVDEA 348
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
+M G D +TYN++ E L ++ + E + + + LN A+
Sbjct: 349 INLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESV---PLEGVKLNVASYRIL 405
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E + A+ + +L G LP A++N LL+GL + GR++D
Sbjct: 406 MNCLCSRGEMDKAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADA 453
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 31/254 (12%)
Query: 26 PEHVLAYETFLITLIRGKQVDE---ALKFLRVMKGENCFPTL-KFFSNALD----ILVKL 77
P+H LA FL L+R +V A+ R++ C L + S+ D L +
Sbjct: 124 PDHALALLRFLPALLRTSRVSHKALAVCLDRLVSSRGCHGVLDELLSDLRDPRNKYLPRP 183
Query: 78 NDSTHTVQLWDIMVGIG-----------------FNLMPNLIMYNAVVGLLCNNNDVDNV 120
N + + L V IG ++ PNL+ Y+ ++ LC +
Sbjct: 184 NTCVYNI-LIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEA 242
Query: 121 FRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F F++M+ PD L YN+I + + +V + F M KN+ +P N AT I
Sbjct: 243 FELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLIN 302
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
+ E A ++ + G+ P S L+ L G + + EM +
Sbjct: 303 GHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRA 362
Query: 237 -ILIYDVTMQKLKK 249
++ Y++ ++ L +
Sbjct: 363 DVVTYNLVIEGLCR 376
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 35/154 (22%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ LC ++D + M+ G P++ YN + L+ K + F EM
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 164 KNEWQPTPLNCATAI-------------------------------TMLLDA----DEPE 188
PT + T I +ML+ + E
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A+++WN + G P N+L+ GL ++G++
Sbjct: 252 KALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 4/240 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ +A F E+ +R P V ++ T + L + + +DE + + M+ +P
Sbjct: 235 KEGSIRDAKLIFNEIRKR-GLRPTTV-SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S + L K QL+D M G L PN I + A++ C + +D+
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG--LRPNGITFTALIDGQCRSRRIDSAMNT 350
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD + YN + L K V++ EM +P + T I
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCK 410
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+EI + E G++ + L+ G GR+ D R EM+ + D T
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 45/296 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + A + F EM +R P + + + R +++D A+ M
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQR-GLRPNGI-TFTALIDGQCRSRRIDSAMNTYHQMLTMGV 359
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV--- 117
P L ++ L+ L K+ D +L D M +G + P+ I Y ++ C D+
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG--MKPDKITYTTLIDGYCKEGDLESA 417
Query: 118 --------------DNVF------------------RFFDQMVFHGAFPDSLTYNMIFEC 145
DNV R +MV G PD TY M+ +
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K V EM N +P + + L + + A + +L G+ P
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
+ + N+LL G G+ D+ + + N + LI D + YN +S++DR
Sbjct: 538 DITYNILLEGHCKNGKAEDLLK----LRNEKGLIVDYAYYTSLVSEYN--KSLKDR 587
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
N+N ++ F+ +++ +G P YN++ K + + + F+E+ K +PT +
Sbjct: 200 NSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV 259
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ T I L + + + + EN I P + +VL+ GL GRL + +EM
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319
Query: 233 LNRRILIYDVTMQKL 247
R + +T L
Sbjct: 320 QQRGLRPNGITFTAL 334
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + G++ +A + F +M E +V Y + +L R Q+ A M C
Sbjct: 256 GWCRAGDIAKAEEVFSDMKE--AGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 313
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F++ + + VK + +Q+++ M +G + I YN ++ C + ++D
Sbjct: 314 DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLG--CAADTISYNFLIESHCKDENLDEA 371
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G P++ T+N IF C+ + V+ + +M + + P L + M
Sbjct: 372 VKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRM 431
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
D+ + +++ + E+ + P + +L++ G ++ +EM+ + L
Sbjct: 432 FADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKP 491
Query: 239 ---IYDVTMQKLKKA 250
IY+ ++ L+ A
Sbjct: 492 NLSIYETVLELLRNA 506
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 3/185 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + + +R EA+ M+ C P FS + L K ++ +D
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ P++I+Y ++V C D+ F M G P+ TY+++ + L +
Sbjct: 238 ---SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCR 294
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + F EMI P + + + + + A E ++++N + G S
Sbjct: 295 CGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTIS 354
Query: 209 ANVLL 213
N L+
Sbjct: 355 YNFLI 359
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 10/245 (4%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L L+ + +D ALK L M G P + ++ L D +L+D ++ G
Sbjct: 211 LLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGG 270
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+P++ MY ++ C + + R D+M G P+ +TY+++ E K K E
Sbjct: 271 R--VPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAE 328
Query: 155 VENFFHEMIKNEWQP-TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
N EM+ P TPL M D E A ++W ++++ + P N L+
Sbjct: 329 ACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKA-EEAHQMWRWMVKKNVPPDNTITNTLI 387
Query: 214 VGLRNLGRLSDVRRFAEEM---LNRRILIYDVTMQKL-KKAFYNESRSMRDRFDSLERRW 269
L G + + R+ +E+ +L Y+ + L + E+ + D D +ERR+
Sbjct: 388 YWLCKSGMVREARKLFDELEKGYKPSLLTYNSLISGLCENGELQEAGKVWD--DMVERRY 445
Query: 270 KTSQM 274
+ + M
Sbjct: 446 EPNAM 450
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + +A + EM E P V Y + + + EA +R M G
Sbjct: 284 GYCRTGKIQDAARIMDEM-EAAGVQPNEV-TYSVVIEACCKEGKSAEACNLMREMLGAGH 341
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D++ + + Q+W MV N+ P+ + N ++ LC + V
Sbjct: 342 TPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVK--KNVPPDNTITNTLIYWLCKSGMVREA 399
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD++ G P LTYN + L +N ++ E + +M++ ++P + I
Sbjct: 400 RKLFDELE-KGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKG 458
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+P+ ++ ++ G P + VL+ L
Sbjct: 459 FCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSL 494
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 7/230 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + R ++ +A + + M+ P +S ++ K S L
Sbjct: 275 VTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMR 334
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+G G P+ + VV ++C + + + + MV PD+ N + L K
Sbjct: 335 EMLGAGHT--PDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCK 392
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ V E F E+ K ++P+ L + I+ L + E + A ++W+ ++E P +
Sbjct: 393 SGMVREARKLFDELEKG-YKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMT 451
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKAFYNE 254
L+ G +G+ + EM+ + ++Y V + L + +++
Sbjct: 452 YEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSEPIHDD 501
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+L+ N ++ L D+D + D+M G PD +TY + + + +
Sbjct: 201 ITPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQ 260
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVL 212
F ++I P T T+L+D + + A I + + G+ P E + +V+
Sbjct: 261 KLFDDIIAGGRVPD----VTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVV 316
Query: 213 LVGLRNLGRLSDVRRFAEEMLN 234
+ G+ ++ EML
Sbjct: 317 IEACCKEGKSAEACNLMREMLG 338
>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 376
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRAVCVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ + LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLXKGLCLDHKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 35/187 (18%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ LC ++D + M+ G P++ YN + L+ K + F EM
Sbjct: 132 YSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 164 KNEWQPTPLNCATAITMLLDAD-----------------------------------EPE 188
PT + T I L + + E
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+++WN + G P N+L+ GL ++G++ +M + V+ L
Sbjct: 252 KALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLM 311
Query: 249 KAFYNES 255
+ FY +
Sbjct: 312 EGFYKDG 318
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 13/278 (4%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K N EA K F EM+E P+ VLA + + TL + + +EA K +K N P
Sbjct: 507 SKASNADEAMKVFSEMIET-RCVPD-VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDP 564
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T ++ L L + + L + M + PNLI YN V+ LC N +V+
Sbjct: 565 TDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYP--PNLITYNTVLDCLCKNGEVNYALG 622
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +YN L+K ++ E F +M K C + +
Sbjct: 623 MLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVK 682
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ E + YIL+ G +S + L+ G+ + FAE + RIL+ D
Sbjct: 683 NGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDF 742
Query: 243 TMQKL-------KKAFYNESRSMRDRFDSLERRWKTSQ 273
+ L KKA E+ + +F+SL KT
Sbjct: 743 FLSPLIRHLCKSKKAL--EAHELVKKFESLGVSLKTGS 778
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA+ F +M ++ P+ +Y + + ++ +++ AL+ M P
Sbjct: 370 GRVDEASDVFDQMKQK-GIEPQQ-YSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGY 427
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ ++ K +S ++ +++M G ++P+++ NAV+ L + + R F
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKG--IVPDVVAGNAVLYSLAKSGRLGMAKRVFH 485
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
++ G PD++TY M+ +C K E F EMI+ P L + I L A
Sbjct: 486 ELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG 545
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A +I++ + E + P + + N LL GL G++ +V EEM
Sbjct: 546 RGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEM 592
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 10/232 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G EA K +M + E V+ + L +V +A MK + P
Sbjct: 263 QAGRFEEAYKILQKMED--EGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPD 320
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ LD DS +++W+ M G+N N++ Y AVV LC VD
Sbjct: 321 RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYN--DNVVAYTAVVDALCQVGRVDEASDV 378
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML-- 181
FDQM G P +YN + +K +++ F+ M N PTP N T + +
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHM--NIHGPTP-NGYTYVLFINY 435
Query: 182 -LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E AI+ + + GI+P + N +L L GRL +R E+
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ ++++A M C P ++ L+
Sbjct: 873 MSEGFSPTP---CTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLA 929
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ +L+ MV G N P++ Y ++G LC +++ +F Q+ G PD +
Sbjct: 930 GNTEKVCELFQNMVDQGIN--PDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLI 987
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ L ++ ++ E + F++M K+ P + I L + A +++ +
Sbjct: 988 TYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEEL 1047
Query: 198 LENGILPLEASANVLLVG 215
L+NG P + N L+ G
Sbjct: 1048 LKNGWKPNVFTYNALIGG 1065
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K + EA+ + E PT + LD L+K L+D
Sbjct: 847 VTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ + + V F MV G PD +Y ++ L
Sbjct: 907 MLDYGCK--PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTA 964
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ ++F ++ + +P + I L + E A+ ++N + ++GI P +
Sbjct: 965 GRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTY 1024
Query: 210 NVLLVGLRNLGRLSDVRRFAEEML 233
N L++ L G+ ++ + EE+L
Sbjct: 1025 NSLILYLGKEGKAAEAGKMYEELL 1048
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ + + ++++ + +M G +TYN I L+K+K ++E +
Sbjct: 809 PDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDL 868
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++++ + PTP + LL + E A ++++ +L+ G P A N+LL G R
Sbjct: 869 YYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRL 928
Query: 219 LGRLSDVRRFAEEMLNRRI 237
G V + M+++ I
Sbjct: 929 AGNTEKVCELFQNMVDQGI 947
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ L + N +D F +M G PD TYN+I + + K+ ++ ++ EM
Sbjct: 779 YNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMH 838
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
++ T + T I+ L+ + A++++ ++ G P + LL GL G++
Sbjct: 839 CKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIE 898
Query: 224 DVRRFAEEMLN 234
D +EML+
Sbjct: 899 DAEDLFDEMLD 909
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 90/225 (40%), Gaps = 3/225 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EA++ +VM + P+++ +S L + D V L M
Sbjct: 185 YNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYS-VLMLAFGKRDVETVVWLLREME 243
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G PN+ Y + +L + ++ +M G PD +T ++ + L +
Sbjct: 244 DHGVK--PNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGR 301
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + ++ F +M ++ +P + T + D + IEIWN + +G +
Sbjct: 302 VSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTA 361
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++ L +GR+ + ++M + I + L F R
Sbjct: 362 VVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADR 406
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L R +++EA+ M+ P L +++ + L K + ++++
Sbjct: 986 LITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYE 1045
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ PN+ YNA++G + DN F + QM+ G P+S TY
Sbjct: 1046 ELLKNGWK--PNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + F M+E+ P+ L Y + R QV++A M+ C
Sbjct: 256 GLCRAGKMKEAFELFEGMIEKDHIVPDQ-LTYNVIIDGFCRLGQVEKARTIFGFMRKNEC 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ K D + +++ M G P+ + Y A++G LC + VD
Sbjct: 315 EPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVE--PDAVSYTALIGCLCRHGSVDEG 372
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D +TYN++ E L K+ ++ EV + + + Q + +
Sbjct: 373 IDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNT 432
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + + E A+ + +L G LP A++N LL+GL ++GR++D
Sbjct: 433 LCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADA 477
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHE 154
++ PNL+ Y+ ++G LC + F F+ M+ PD LTYN+I + + +V +
Sbjct: 242 DVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEK 301
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F M KNE +P N AT I + E A ++ + G+ P S L+
Sbjct: 302 ARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIG 361
Query: 215 GLRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKK 249
L G + + V E+ ++ Y++ ++ L K
Sbjct: 362 CLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCK 400
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 8/223 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCF---PTLKFFSNALDILVKLNDSTHTVQLWD 88
Y + ++ + A + L M+ C P L +S L L + +L++
Sbjct: 212 YNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFE 271
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ +++P+ + YN ++ C V+ F M + P++ Y + K
Sbjct: 272 GMIEKD-HIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCK 330
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V + F EM +P ++ I L + I++ + E G +
Sbjct: 331 KGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVT 390
Query: 209 ANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKL 247
N+LL GL GR+++V R EE + + Y + M L
Sbjct: 391 YNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTL 433
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPE---HVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
++ V +K + MV+ E P V++Y T + T R +A + M+ +
Sbjct: 298 KRHCRVSHPDKCYNFMVKEME--PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ +++ + ++ +S+ +L D M +G L P+ I Y ++ LC + +VD
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG--LSPDRIFYTTILDHLCKSGNVDK 413
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F+ M+ H PD+++YN + L ++ +V E F +M E P L I
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473
Query: 180 MLLDADEPEFAIEIWNYILENG 201
L+ + A ++W+ +++ G
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKG 495
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 5/229 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF-FSNALDILVKLNDSTHTVQLWD 88
LAY + + L++ +D A++ M+ + + F ++ + +LV+ + ++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMR-HSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +GF+L+P Y+ + LC D + M G PD +N+ + L +
Sbjct: 69 DMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
KV F M++ +P ++ I L A + A+EIWN ++ +G+ P +
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 209 ANVLLVGLRNLGRLS-DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+VGL + ++ AEE+ + R+ + V L F R
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGR 235
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GNV +A F +M+E E P+ + +Y + + L R +V EA+K MKG+ C P
Sbjct: 407 KSGNVDKAYGVFNDMIEH-EITPDAI-SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
F + L++ + ++WD M+ GF L
Sbjct: 465 ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y L R D+ F+ F + +S ++ + +++ +L++ M
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++ N++ Y +++ + + DQM G PD + Y I + L K+
Sbjct: 352 RQKG--MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSG 409
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V + F++MI++E P ++ + I+ L + AI+++ + P E +
Sbjct: 410 NVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFK 469
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
++ GL +LS + ++M+++
Sbjct: 470 FIIGGLIRGKKLSAAYKVWDQMMDK 494
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 23/264 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+E V A +TF MV+R P+ V++Y + L R +V +A++ M P
Sbjct: 126 RENKVGFAVQTFFCMVQRGR-EPD-VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG---IGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
K A LV V L MV + + ++YNA++ C ++
Sbjct: 184 NK----ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD +TYN++ N + E EM+++ Q + +
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 181 LLDADEPEFAIEIWNYILE----NGILPLEASANVLLVGLRNLGRLSDVR---RFAEEML 233
P+ + +N++++ G + + + + + R S+ R R EEM
Sbjct: 300 HCRVSHPD---KCYNFMVKEMEPRGFCDVVSYSTL----IETFCRASNTRKAYRLFEEMR 352
Query: 234 NRRILIYDVTMQKLKKAFYNESRS 257
+ +++ VT L KAF E S
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNS 376
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V+EA + F EMV R +P+ ++ Y + + L ++DEA + +M + C
Sbjct: 272 KNGKVLEAKELFEEMV-RMSIDPD-IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++L+ M G L+ N + YN ++ DVD F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM F G PD TYN++ L N ++ + F +M K E + T I +
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A ++ + G+ P + ++ GL G L +V +M ++ D T
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Query: 244 MQ 245
+
Sbjct: 508 LS 509
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V +A +MVE + P+ ++AY + +L + K+V++A F + ++ +
Sbjct: 164 GFCRRNRVSDAVSLVDKMVE-IGYKPD-IVAYNAIIDSLCKTKRVNDAFDFFKEIERKG- 220
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ PN++ Y A+V LCN++ +
Sbjct: 221 ------------------------------------IRPNVVTYTALVNGLCNSSRWSDA 244
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R M+ P+ +TY+ + + +KN KV E + F EM++ P + ++ I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + A ++++ ++ G L S N L+ G R+ D + EM R ++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 241 DVTMQKLKKAFYN 253
VT L + F+
Sbjct: 365 TVTYNTLIQGFFQ 377
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F + +ER P +V+ Y + L + +A + L M + P + +S LD
Sbjct: 212 FFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
VK +L++ MV + + P+++ Y++++ LC ++ +D + FD MV G
Sbjct: 271 VKNGKVLEAKELFEEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D ++YN + K K+V + F EM + + T I A + + A E +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + GI P + N+LL GL + G L E+M R +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 12/224 (5%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG--- 94
T +R ++++A+ M FP++ F+ L +VKL +D+++ +G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKK-------YDVVISLGKKM 111
Query: 95 --FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ +L +N V+ C V +M+ G PD +T + + +V
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ + +M++ ++P + I L A + + I GI P + L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ GL N R SD R +M+ ++I +T L AF +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
>gi|124360979|gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 511
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 16/275 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ G+V + EMV+R + P+ V ++ + + + +AL+ L M+
Sbjct: 225 GFKETGDVTSVELFYHEMVKR-GFKPDSV-SFGIRIDAYCKKGRFGDALRLLEEMESRK- 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ----LWDIMVGIGF-NLMPNLIMYNAVVGLLCNNN 115
F +++ + L VQ W + I NL+ + +YNA++ L N
Sbjct: 282 ------FVVSVETITTLIHGAGLVQNPGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNR 335
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
DV + D M+ PD +TY+ IF L+K++ + V + +M K ++ P
Sbjct: 336 DVVSALSLMDGMIEKQILPDGVTYHTIFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVV 395
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++ +WNY++E G P + ++L+ GL + G + + +++ L R
Sbjct: 396 VLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLER 455
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
I L++ +SR + D+ L++ K
Sbjct: 456 GRYISSTAFLMLER-LLKQSRDV-DKLKELDQMIK 488
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 4/269 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ EA+ F M E A+ + L L ++ EA+ L +M +
Sbjct: 124 KSGHASEAHSVFCRMWSSHEKGDRD--AFVSMLEALCNAEKTAEAIDLLHMMPEKGITTD 181
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L KL + L+D M G + P++ YN ++ VD
Sbjct: 182 VGMYNIIFSALGKLKQVSFMSSLYDKMKANG--VAPDVFTYNIMISSFGRVGLVDKASEL 239
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M PD +TYN + CL KN + E F +M + + P + I
Sbjct: 240 FEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGK 299
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+++ + A +++ ++ G +P + N+LL L G+ + + E + + + +T
Sbjct: 300 SNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSIT 359
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTS 272
L++ R+ R R S W S
Sbjct: 360 YSILERLESRSQRTARIRKPSRTTGWVIS 388
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 7/206 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++AY T + L + K VD+A+ L M +C P +S LD+L ++
Sbjct: 44 NLIAYNTVIEALGKNKMVDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEIL 103
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
DI G N +Y+ +V LC + F +M D + + E L
Sbjct: 104 DICSG-----HLNRSVYSYLVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALC 158
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAI-TMLLDADEPEFAIEIWNYILENGILPLE 206
+K E + H M+ + T + I + L + F +++ + NG+ P
Sbjct: 159 NAEKTAEAIDLLH-MMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDV 217
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N+++ +G + EEM
Sbjct: 218 FTYNIMISSFGRVGLVDKASELFEEM 243
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
MK NC P ++ + + K +T V + MV G L NLI YN V+ L N
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVL--NLIAYNTVIEALGKN 58
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
VD +M+ P+ TY+++ + L ++H +
Sbjct: 59 KMVDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRL 99
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+V A + M++ ++P+ V Y + + L + +V EA++FL M +C
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQE-GYDPD-VYTYNSVISGLCKLGEVKEAVEFLDQMITRDC 361
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L K N +L ++ G ++P++ +N+++ LC +
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKG--ILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G PD TYNM+ + L K+ E N +M + + + T I
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A++ A EI++ + +G+ + N L+ GL R+ D + ++M+
Sbjct: 480 FCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + +M+ R + +P V Y T + TL + QV+EA + RV+ +
Sbjct: 339 GLCKLGEVKEAVEFLDQMITR-DCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM--------------- 98
P + F++ + L + ++L++ M G +N++
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 99 -----------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++I YN ++ C N + FD+M HG +S+TYN + + L
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+++V + +MI +P + +T + + A +I + NG P
Sbjct: 517 KSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 208 SANVLLVGLRNLGRL 222
+ L+ GL GR+
Sbjct: 577 TYGTLISGLCKAGRV 591
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 3/236 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L ++DEAL L+ M+ C ++ ++ +D K N +++D M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + N + YN ++ LC + V++ + DQM+ G PD TYN + +
Sbjct: 497 EVHGVSR--NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + M N +P + T I+ L A E A ++ I GI + N
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYN 614
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYD-VTMQKLKKAFYNESRSMRDRFDSL 265
++ GL + ++ EML + D V+ + + + N +R+ D L
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ +N +V LC V + D M+ G PD TYN + L K +V E F
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+MI + P + T I+ L ++ E A E+ + GILP + N L+ GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
++PE L YE L+ L R D+ K L MK C + ++ IL+ +S
Sbjct: 79 FSPEPAL-YEEILLRLGRSGSFDDMRKILEDMKNSGC----EMGTSPFLILI---ESYAQ 130
Query: 84 VQLWDIMVGI------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+L D ++G+ F L P+ YN ++ LL + N++ V +M G PD
Sbjct: 131 FELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVS 190
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
T+N++ + L + ++ +M P T + ++ + + A+ I +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQM 250
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+E G S NV++ G GR+ D F +EM N+
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ ++ A + F M+ + +V Y + L EAL LR M+G C P
Sbjct: 127 SDASLTSARRFFDSMLS--DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPN 184
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + + + +L +M+ G L PNL+ +N++V +C +++ +
Sbjct: 185 VVTYNTLVAAFFRAGEVDGAERLVGMMLDGG--LKPNLVTFNSMVNGMCKAGKMEDARKV 242
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+M+ G PD ++YN + K HE + F EM + P + + I ++
Sbjct: 243 FDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 302
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A E+A+ + + E G+ E + L+ G G L D M RI
Sbjct: 303 AGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRI 356
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+AL +R M+ P++ ++ ++ + +L M G L P+++ Y
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG--LKPDVVTY 398
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ ++ C N D + F QM+ G PD++TY+ + L + K++ + F MIK
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
QP + I E A+ + + +++ G+LP + +VL+ GL R +
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518
Query: 225 VRRFAEEMLNRRILI----YDVTMQKLKKA 250
++ ++ + + YD M +KA
Sbjct: 519 AQQLLFKLYHEEPIPANTKYDALMHCCRKA 548
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 12/240 (5%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VLAY L+ L + A +F M + P + ++ + L + +
Sbjct: 116 VLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILR 174
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G PN++ YN +V +VD R M+ G P+ +T+N + + K
Sbjct: 175 DMRGAGCG--PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + F EM++ P ++ T + A A+ ++ + + GI+P +
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL-----KKAFYNES----RSMR 259
L+ + G L +M R + + +VT L KK F +++ R MR
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 38/257 (14%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + +L R + EA+ LRVMK + P + + K +
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFV 376
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD---------------------- 125
D M+ G+ +P+++ YN ++G LC D F
Sbjct: 377 DDMISAGW--LPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALW 434
Query: 126 -------------QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+M+ +G PD +TYN + L ++ V E +M + EWQPT +
Sbjct: 435 SSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVI 494
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + L A AIE+ +++NG P E + +L+ G+ G S A+ +
Sbjct: 495 SYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSL 554
Query: 233 LNRRILIYDVTMQKLKK 249
++ + D+ ++L+K
Sbjct: 555 VSMNAISQDL-FRRLQK 570
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 43/256 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
AN+ M R ++P+ V+ Y + +L ++D ALK + + +NC PT+ ++
Sbjct: 165 ANRVILRMKYR-GFSPD-VVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTIL 222
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF--------- 121
++ + ++L D M+ G L P++ YN +V +C VD F
Sbjct: 223 IEATIIHGSIDDAMRLLDEMMSRG--LQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTT 280
Query: 122 -----------------------RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
R M+ G P+ +TY+++ L ++ K E +
Sbjct: 281 PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDV 340
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M + P I+ + + AI + ++ G LP + N ++ L
Sbjct: 341 LRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCK 400
Query: 219 LGRLSDVRRFAEEMLN 234
GR A+E LN
Sbjct: 401 KGR-------ADEALN 409
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + + EAL FL M P + + + L + V++ +I+ G
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD--- 143
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YNAV+ C ++ D R +M + G PD +TYN++ L K+
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++++ PT + I + + A+ + + ++ G+ P + NV++ G+
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 219 LG 220
G
Sbjct: 264 RG 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ Y+ ++ LC + M G PD+ Y+ + K KV F
Sbjct: 316 PNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGF 375
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+MI W P +N T + L + A+ I+ + E G P +S N + L +
Sbjct: 376 VDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWS 435
Query: 219 LG 220
G
Sbjct: 436 SG 437
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EMV+R +P ++ Y + + ++DEA + M ++CFP
Sbjct: 338 KEGKLVEAEKLYDEMVKR-SIDPS-IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++++ M G L+ N + YN ++ L D D
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRG--LVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G P+ +TYN + + L KN K+ + F + +++ +PT I +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E +++ + G+ P + N ++ G G + +EM
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL K++ EA+ + M P F+ + L N ++
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L D MV G P+L+ Y VV LC D D F ++M P L YN I
Sbjct: 205 AMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K K + + N F EM +P + ++ I+ L + A + + ++E I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + + L+ G+L + + +EM+ R I VT L F M DR
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF-----CMHDRL 377
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 378 DEAKQMFE 385
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 2/231 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y + R Q+ AL L M P + S+ L+ + V
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M G+ PN + +N ++ L +N D+MV G PD +TY ++
Sbjct: 173 LVDQMFVTGYQ--PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K N ++M + + +P L T I L + A+ ++ + GI P
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ + L+ L N GR SD R +M+ R+I T L AF E +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + D A L M+ P + ++ +D L K + L+
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN++ Y++++ LCN + R M+ PD T++ + + +K
Sbjct: 281 EMETKG--IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E + EM+K P+ + ++ I D + A +++ +++ P +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
N L+ G R+ + EM R + + Y++ +Q L +A
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 3/233 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P V + T + L + EA+ + M + C P L + ++ L K D+
Sbjct: 182 YQPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
L + M L P +++YN ++ LC +D+ F +M G P+ +TY+ +
Sbjct: 241 FNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
CL + + +MI+ + P + I + + A ++++ +++ I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + L+ G RL + ++ E M+++ VT L K F R
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A++ +M+ER + NP+ V + + ++ ++ EA K M + P++ +S+
Sbjct: 309 DASRLLSDMIER-KINPD-VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ + Q+++ MV + P+++ YN ++ C V+ F +M
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G +++TYN++ + L + + F EM+ + P + T + L + E
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
A+ ++ Y+ + + P + N+++ G+ G++ D
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 6/225 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y T + L + K +D+AL + M+ + P + +S+ + L + +L
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ N P++ ++A++ + + +D+MV P +TY+ +
Sbjct: 316 DMIERKIN--PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ E + F M+ P + T I E +E++ + + G++ +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
N+L+ GL G + +EM++ I+ Y+ + L K
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 5/222 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V E + F EM +R + + Y + L + D A + + M +
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K + +++ + + P + YN ++ +C V++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS--KMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G PD + YN + + E + F EM ++ P T I
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E + E+ + G +AS L+ + + GRL
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 621
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+A+ L L K+ +A+ LR M C P + ++ L L N S ++L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G + P+++ Y V+ D+D + + +M+ G P+ +TY+ I L
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + + M+KN P NC T +++ + +P+ AI + +G+ P
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMP---NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ L GR ++ R+ + M R
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V++Y T + + +D+A M P + +S+ + L K ++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ MV G +MPN YN++V C++ F +M G PD +TYN + +
Sbjct: 256 VLTSMVKNG--VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENG 201
L KN + E F M K +P T LL + A+ + + ++ NG
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 202 ILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
I P ++L+ G++ + ++ LN + Y + L K+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K F M +R PE + Y T L + E L +M P
Sbjct: 316 KNGRCTEARKMFDSMTKR-GLKPE-ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
FS + K + ++ M G N P+ + Y V+G+LC + V++ R+
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN--PDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
F+QM+ P ++ YN + L K + +++F
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF 467
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + L + + EA K M P + + L L D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+MV G + PN +++ ++ VD F +M G PD++TY + L K
Sbjct: 364 LMVRNGIH--PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
+ +V + +F +MI P
Sbjct: 422 SGRVEDAMRYFEQMIDERLSP 442
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + +A+ EMV R P V+ Y T + ++ K+V A + +M + CF
Sbjct: 534 FSKAGIIKQAHNWLDEMV-RDGCEPT-VVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVG------------IGFNLM--PNLIMYNAV 107
P + ++ +D K + Q++ M G I N+ PN++ Y A+
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
V LC + V + + M G P+++ Y+ + + K K+ E + FH+M+++ +
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
P ++ I L + +++ + +LEN P
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI----- 73
+E+ E P +V+ Y + ++ G ++ + F K N + N +++
Sbjct: 404 MEKCECKPGYVV-YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFAR 462
Query: 74 -LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
L ++ M+G GF +P+ Y+ V+G LCN + V+N F F +M G
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGF--VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD TY ++ +C K + + N+ EM+++ +PT + T I L A + A E
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ ++ G P + L+ G G + + M
Sbjct: 581 LFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F +MVE +NP +V Y + + L + K++D LK L M +C
Sbjct: 689 GFCKAAKLDEAQEVFHKMVEH-GYNP-NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC 746
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G PN++ Y A++ VD
Sbjct: 747 APNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK--PNVVTYTAMIDGFGKAGKVDKC 804
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TY ++ + E EM + W ++
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH----VSSYCK 860
Query: 181 LLDADEPEF--AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+++ + EF ++ + + +NG P+ VL+ GRL +E+++
Sbjct: 861 VIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 8/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y L + KQ+ + L +M E C+P+ F++ + K +D ++ +L
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF------FDQMVFHGAFPDSLTYNM 141
M P ++YN ++G +C+ ++ F +++M+ G + +
Sbjct: 402 KKMEKC--ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + HEM+ N + P + I L +A E A ++ + G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++P + +L+ G + + +EM+ VT L A+
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + + +A +L M + C PT+ ++ + +K + +L++
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD------------- 135
+M+ G PN+I Y A++ C + +++ + + +M PD
Sbjct: 584 LMIAKG--CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641
Query: 136 ---SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
+TY + + L K KV + + M + +P + I A + + A E
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLK 248
+++ ++E+G P + + L+ L RL V + +ML I+IY + L
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Query: 249 K 249
K
Sbjct: 762 K 762
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 85/240 (35%), Gaps = 28/240 (11%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+F L + ++A K + M G P +S + L + + L+ M G
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G ++P++ Y ++ + + D+MV G P +TY + +K KKV
Sbjct: 519 G--VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 154 EVENFFHEMIKNEWQPTPLN-----------------CATAITMLLDADEPEFAI--EIW 194
F MI P + C M DAD P+ + +I
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML----NRRILIYDVTMQKLKKA 250
N + E P + L+ GL ++ D R E M ++YD + KA
Sbjct: 637 NNVAEK---PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN- 59
GW + G + + K + EM R V+ Y T + L ++ D+A+ L M+ E
Sbjct: 192 GWSRAGRLDKVGKLWAEM--RLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGI 249
Query: 60 ------CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
C P + + A + D+ ++ + + + + PN+ +N++V C
Sbjct: 250 EANLLTCNPIVYALAQA----GRFQDAHKVLEKFPL-----YGVAPNISTFNSLVMGYCK 300
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ D+ M G P + TYN F KN V NF+ +MI N + P L
Sbjct: 301 HGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLT 360
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ ML A+ E +++ + +G P A++ +L+ L + + E+M
Sbjct: 361 YVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMF 420
Query: 234 NRRILIYDVTMQKLKK 249
R I+ +T QKL +
Sbjct: 421 KRGIVPQYITYQKLMR 436
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
G+MV + ++P+ V Y + L ++ EA KFL M N P + ++ +D L
Sbjct: 34 LGKMVSK-GFHPD-VYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGL 91
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K V L M +P + YN+++ LC + ++MV+ G P
Sbjct: 92 CKGGRVDEAVALLSKMRK---KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIP 148
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D TY + K+KK + F +++ ++P + + I L + AI+++
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 208
Query: 195 NYILENG-ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
++++G +P + N L+ G +G++ + E M VT L F
Sbjct: 209 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Query: 254 ESRSMRDRFDSL 265
+R + D +D L
Sbjct: 269 LAR-LDDAYDLL 279
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K EA EMV + + Y T + + K+ D+AL+ +
Sbjct: 124 GLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K + L+ M+ G + MPN + YN+++ C +D
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G+ PD +TY + K ++ + + ++M + P + + +
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA-EEM 232
L + A+ I + P + N +L G +L + R+F EEM
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 114/303 (37%), Gaps = 39/303 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA FG M++ P V Y + + R ++DEA+ L M
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ KL L + M G L P+++ + +++ LC N + +
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG--LTPDVVTFTSLMDGLCRENRLSDA 310
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF-------------FHEMIKN-- 165
+M P TYN I + + ++ E F F+ MI+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLC 370
Query: 166 ------------------EWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLE 206
P + T I L + + A ++ +LE G LP
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLE 266
+ + L+ GL N G L R + E+ I Y++ + +KA N R+ D +
Sbjct: 431 ITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA--NRDEDARELLDDMV 488
Query: 267 RRW 269
+R
Sbjct: 489 QRG 491
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+ + Y +++ LC ++ F +MV G PD TY + L ++HE F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM P + I L + A+ + + + +P + N L+ GL
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLISGLCKA 128
Query: 220 GRLSDVRRFAEEML 233
R S+ EEM+
Sbjct: 129 ERASEAYDLLEEMV 142
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLBRAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMXTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ LC ++B + M+ G P++ YN + L+ K + F EM
Sbjct: 132 YSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMX 191
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
PT + T I L + A + +L+ G+ P + ++L+ GL
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLNPGVITYSMLMKGL 244
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EMV+R +P ++ Y + + ++DEA + M ++CFP
Sbjct: 133 KEGKLVEAEKLYDEMVKR-SIDP-SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++++ M G L+ N + YN ++ L D D
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRG--LVGNTVTYNILIQGLFQAGDCDMAQEI 248
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G P+ +TYN + + L KN K+ + F + +++ +PT I +
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E +++ + G+ P + N ++ G G + +EM
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + D A L M+ P + ++ +D L K + L+
Sbjct: 16 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 75
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN++ Y++++ LCN + R M+ PD T++ + + +K
Sbjct: 76 EMETKG--IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E + EM+K P+ + ++ I D + A +++ +++ P +
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
N L+ G R+ + EM R + + Y++ +Q L +A
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ L D MV G P+L+ Y VV LC D D F ++M P L YN I
Sbjct: 1 MALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 58
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K K + + N F EM +P + ++ I+ L + A + + ++E I
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
P + + L+ G+L + + +EM+ R I VT L F M DR D
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF-----CMHDRLD 173
Query: 264 SLERRWK 270
++ ++
Sbjct: 174 EAKQMFE 180
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A++ +M+ER + NP+ V + + ++ ++ EA K M + P++ +S+
Sbjct: 104 DASRLLSDMIER-KINPD-VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ + Q+++ MV + P+++ YN ++ C V+ F +M
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 219
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G +++TYN++ + L + + F EM+ + P + T + L + E
Sbjct: 220 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 279
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
A+ ++ Y+ + + P + N+++ G+ G++ D
Sbjct: 280 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 314
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
M + C P L + ++ L K D+ L + M L P +++YN ++ LC
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKY 64
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+D+ F +M G P+ +TY+ + CL + + +MI+ + P
Sbjct: 65 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ I + + A ++++ +++ I P + + L+ G RL + ++ E M++
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184
Query: 235 RRILIYDVTMQKLKKAFYNESR 256
+ VT L K F R
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKR 206
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 6/225 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y T + L + K +D+AL + M+ + P + +S+ + L + +L
Sbjct: 51 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 110
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ N P++ ++A++ + + +D+MV P +TY+ +
Sbjct: 111 DMIERKIN--PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 168
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ E + F M+ P + T I E +E++ + + G++ +
Sbjct: 169 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 228
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
N+L+ GL G + +EM++ I+ Y+ + L K
Sbjct: 229 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 273
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 5/222 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V E + F EM +R + + Y + L + D A + + M +
Sbjct: 200 GFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ LD L K + +++ + + P + YN ++ +C V++
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR--SKMEPTIYTYNIMIEGMCKAGKVEDG 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G PD + YN + + E + F EM ++ P T I
Sbjct: 316 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E + E+ + G +AS L+ + + GRL
Sbjct: 376 RLRDGDREASAELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 416
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A + EM ER P + + T + R +++AL+F + +
Sbjct: 378 GLCKERRLSDAEELLNEMKER--GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D + + D +LWD M + PN + Y+ ++ C VDN
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDM--HSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+MV G P+ +TYN I + ++ V + + F +M ++ P + T I
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A + + + P + N+++ G G + + ++M R I
Sbjct: 554 YVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 33/248 (13%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L L+R + D+A + R M P ++ F+ + + + ++ +
Sbjct: 229 LVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYK 288
Query: 89 IMVG-------------IG--------------------FNLMPNLIMYNAVVGLLCNNN 115
M G IG F LMP+ ++Y V+G C
Sbjct: 289 EMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAG 348
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ R D+MV G PD +TYN + L K +++ + E +EM + P
Sbjct: 349 LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT 408
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
T I E A++ ++ I + + P + N L+ G+ G L ++M +R
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 236 RILIYDVT 243
I VT
Sbjct: 469 EIFPNHVT 476
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA + + EM R P+ V+++ + R ++D A ++LR M+
Sbjct: 273 GFCRAGELEEALRFYKEMRGR-RVTPD-VVSFSCLIGLFTRRGEMDHAAEYLREMREFGL 330
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + +++ D MV F +P+++ YN ++ LC + +
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA--FGCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G PD T+ + ++ + + FF + +P + T I
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A E+W+ + I P + ++L+ G++ + F +EM+N+ I+
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508
Query: 241 DVTMQKLKKAF 251
+T + K +
Sbjct: 509 IMTYNSIIKGY 519
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G + A + EM E F P+ V+ Y + R + EAL+ M C
Sbjct: 309 FTRRGEMDHAAEYLREMRE-FGLMPDGVI-YTMVIGGFCRAGLMLEALRVRDEMVAFGCL 366
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ L+ L K + +L + M G + P+L + ++ C + +++
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERG--VPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+FFD + PD +TYN + + + + + + + +M E P + + I
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + + A + ++ GI+P + N ++ G G +S ++F +M + +++
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544
Query: 242 VTMQKLKKAFYNESRSMRDRFDSLE 266
+T L + E + M + F+ L+
Sbjct: 545 ITYNTLIHGYVKEGK-MHEAFNLLK 568
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 2/213 (0%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
Q E + M+ FP + + +D + D + L D MV G + P L+
Sbjct: 174 QFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG--IKPGLVT 231
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN+V+ L N D F M G PD ++NM+ + ++ E F+ EM
Sbjct: 232 YNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR 291
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
P ++ + I + E + A E + E G++P +++ G G +
Sbjct: 292 GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ R +EM+ L VT L E R
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN+ + +M R E P HV Y + + QVD A FL M +
Sbjct: 448 GMCRQGDLGKANELWDDMHSR-EIFPNHV-TYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + + + Q M +MP+LI YN ++ +
Sbjct: 506 VPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD--KVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M PD++TYNMI + + E + + +M +P + I
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ A + + ++ + +L+ G+ P
Sbjct: 624 HVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N N +V C V +M FPD +T+N++ + + V
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M+ +P + + + LL + A E++ + G+ P S N+L+ G
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 220 GRLSDVRRFAEEMLNRRI 237
G L + RF +EM RR+
Sbjct: 278 GELEEALRFYKEMRGRRV 295
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V+EA + F EMV R +P+ ++ Y + + L ++DEA + +M + C
Sbjct: 272 KNGKVLEAKELFEEMV-RMSIDPD-IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++L+ M G L+ N + YN ++ DVD F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM F G PD TYN++ L N ++ + F +M K E + T I +
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A ++ + G+ P + ++ GL G L +V +M ++ D T
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Query: 244 MQ 245
+
Sbjct: 508 LS 509
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V +A +MVE + P+ ++AY + +L + K+V++A F + ++ +
Sbjct: 164 GFCRRNRVSDAVSLVDKMVE-IGYKPD-IVAYNAIIDSLCKTKRVNDAFDFFKEIERKG- 220
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ PN++ Y A+V LCN++ +
Sbjct: 221 ------------------------------------IRPNVVTYTALVNGLCNSSRWSDA 244
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R M+ P+ +TY+ + + +KN KV E + F EM++ P + ++ +
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + A ++++ ++ G L S N L+ G R+ D + EM R ++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 241 DVTMQKLKKAFYN 253
VT L + F+
Sbjct: 365 TVTYNTLIQGFFQ 377
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F + +ER P +V+ Y + L + +A + L M + P + +S LD
Sbjct: 212 FFKEIERKGIRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
VK +L++ MV + + P+++ Y+++V LC ++ +D + FD MV G
Sbjct: 271 VKNGKVLEAKELFEEMVRMSID--PDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D ++YN + K K+V + F EM + + T I A + + A E +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + GI P + N+LL GL + G L E+M R +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 12/224 (5%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG--- 94
T +R ++++A+ M FP++ F+ L +VKL +D+++ +G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKK-------YDVVISLGKKM 111
Query: 95 --FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ +L +N V+ C V +M+ G PD +T + + +V
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ + +M++ ++P + I L A + + I GI P + L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ GL N R SD R +M+ ++I +T L AF +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN- 59
GW + G + + K + EM R V+ Y T + L ++ D+A+ L M+ E
Sbjct: 192 GWSRAGRLDKVGKLWAEM--RLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGI 249
Query: 60 ------CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
C P + + A + D+ ++ + + + + PN+ +N++V C
Sbjct: 250 EANLLTCNPIVYALAQA----GRFQDAHKVLEKFPL-----YGVAPNISTFNSLVMGYCK 300
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ D+ M G P + TYN F KN V NF+ +MI N + P L
Sbjct: 301 HGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLT 360
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ ML A+ E +++ + +G P A++ +L+ L + + E+M
Sbjct: 361 YVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMF 420
Query: 234 NRRILIYDVTMQKLKK 249
R I+ +T QKL +
Sbjct: 421 KRGIVPQYITYQKLMR 436
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 13/252 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ KEG V E E+V + +P+ V YE +I + + A + L M +
Sbjct: 447 GFCKEGKVDERMNLLNELVAQ---DPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + L +K D H +L++ G+ N ++ LC+ D
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC--NKIISELCSRGKSDE 561
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G D++TYN + K KV + N +E++ QP+ + A+ I
Sbjct: 562 ASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLII 621
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A +W ++ GI P L+ GL GR A E ++R + +
Sbjct: 622 QLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGR-------ATEGMDRLMGM 674
Query: 240 YDVTMQKLKKAF 251
+ ++ K AF
Sbjct: 675 LENKIKPKKAAF 686
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 98/257 (38%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K +EA + F ++ +R + P+ V+ Y T + L EA K M +
Sbjct: 307 GLCKNEECLEAYRVFNDLKDR-GYAPDRVM-YTTMIHGLCEMGSFGEARKLWFEMMDKGM 364
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L +K D +L++ M G+ + N ++ LC+ D
Sbjct: 365 QPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG--TTTVTCNKIISELCSRGKSDEA 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F +M G D++TYN + K KV E N +E++ + QP+ I
Sbjct: 423 FEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIK 482
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A + + G+ P + + +L G G VR E N+
Sbjct: 483 SCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTT 542
Query: 241 DVTMQKLKKAFYNESRS 257
T K+ + +S
Sbjct: 543 TATCNKIISELCSRGKS 559
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 2/193 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + + K + L M N PT+ + ++ L K + ++++ +
Sbjct: 266 YNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLK 325
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+ P+ +MY ++ LC + + +M+ G P++ TYN + +K+
Sbjct: 326 DRGY--APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++EM + T + C I+ L + + A E++ + E GI + N
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443
Query: 212 LLVGLRNLGRLSD 224
L+ G G++ +
Sbjct: 444 LIRGFCKEGKVDE 456
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 65/164 (39%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
I N +P + Y ++ LC N + +R F+ + G PD + Y + L +
Sbjct: 290 IARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSF 349
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
E + EM+ QP T + L + + E A E++N + G + N +
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L + G+ + ++M I +T L + F E +
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGK 453
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 57/151 (37%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+ + M+ G N ++ C++ V + +Q + G P + TYN +
Sbjct: 212 EFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIA 271
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ K + H MI PT I L +E A ++N + + G P
Sbjct: 272 GFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAP 331
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ GL +G + R+ EM+++
Sbjct: 332 DRVMYTTMIHGLCEMGSFGEARKLWFEMMDK 362
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 60/162 (37%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P YN ++ C + ++ M+ P TY I L KN++ E
Sbjct: 258 GLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEA 317
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F+++ + P + T I L + A ++W +++ G+ P + N +L G
Sbjct: 318 YRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHG 377
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
G EM N+ VT K+ + +S
Sbjct: 378 SLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKS 419
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 110 LLCNNNDVDNVFRFFDQMVF-HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN--E 166
L+ N+V RFF + H PD ++ NM+FE L+ K V +M+++
Sbjct: 97 LVATQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAVRAA-----KMVRDIAG 151
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ P + + L E AIE++ + E GI + N +L G G+ +
Sbjct: 152 FIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLF 211
Query: 227 RFAEEML 233
F +EM+
Sbjct: 212 EFYQEMI 218
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
G+MV + ++P+ V Y + L ++ EA KFL M N P + ++ +D L
Sbjct: 34 LGKMVSK-GFHPD-VYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGL 91
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K V L M +P + YN+++ LC + ++MV+ G P
Sbjct: 92 CKGGRVDEAVALLSKMRK---KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIP 148
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D TY + K+KK + F +++ ++P + + I L + AI+++
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 208
Query: 195 NYILENG-ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
++++G +P + N L+ G +G++ + E M VT L F
Sbjct: 209 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Query: 254 ESRSMRDRFDSL 265
+R + D +D L
Sbjct: 269 LAR-LDDAYDLL 279
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K EA EMV + + Y T + + K+ D+AL+ +
Sbjct: 124 GLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K + L+ M+ G + MPN + YN+++ C +D
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G+ PD +TY + K ++ + + ++M + P + + +
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA-EEM 232
L + A+ I + P + N +L G +L + R+F EEM
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 114/303 (37%), Gaps = 39/303 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + EA FG M++ P V Y + + R ++DEA+ L M
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ KL L + M G L P+++ + +++ LC N + +
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG--LTPDVVTFTSLMDGLCRENRLSDA 310
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF-------------FHEMIKN-- 165
+M P TYN I + + ++ E F F+ MI+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLC 370
Query: 166 ------------------EWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLE 206
P + T I L + + A ++ +LE G LP
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLE 266
+ + L+ GL N G L R + E+ I Y++ + +KA N R+ D +
Sbjct: 431 ITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA--NRDEDARELLDDMV 488
Query: 267 RRW 269
+R
Sbjct: 489 QRG 491
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+ + Y +++ LC ++ F +MV G PD TY + L ++HE F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM P + I L + A+ + + + +P + N L+ GL
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLISGLCKA 128
Query: 220 GRLSDVRRFAEEML 233
R S+ EEM+
Sbjct: 129 ERASEAYDLLEEMV 142
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A + F ++V + P +V Y + + +++ A L M+ +
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKP-NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K+ + +L D+M GF+ PN+ YNA++ LC +D
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS--PNIYTYNAIIDGLCKKGSLDEA 454
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R +++ HG D +TY ++ + + FF++M+K + P + T I+
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIST 514
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + ++ + G++P + + ++ G G S + + M N
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574
Query: 241 DVTMQKLKKAFYNESR--SMRDRFDSL 265
+T L ES+ R+ +D++
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAM 601
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV +G L PN+I + A++ LC + F ++MV G P+ T+ + + L K
Sbjct: 285 MVEMG--LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 150 KKVHEVENFFHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ F ++++++ ++P I D+ A + + + E G++P +
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 209 ANVLLVGLRNLG 220
L+ G +G
Sbjct: 403 YTTLIDGHCKVG 414
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A + F ++V + P +V Y + + +++ A L M+ +
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKP-NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K+ + +L D+M GF+ PN+ YNA++ LC +D
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS--PNIYTYNAIIDGLCKKGSLDEA 454
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R +++ HG D +TY ++ + + FF++M+K + P + T I+
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISX 514
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + ++ + G++P + + ++ G G S + + M N
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574
Query: 241 DVTMQKLKKAFYNESR--SMRDRFDSL 265
+T L ES+ R+ +D++
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAM 601
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 5/216 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V A F EM +R +P+ V +++ ++ +V EA K+L M
Sbjct: 203 GLVEIAENMFVEMCQR-GVSPDCV-SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNA 260
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ +D + V + MV +G L PN+I + A++ LC + F +
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMG--LAPNVINFTALINGLCKQGSIKQAFELLE 318
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAITMLLDA 184
+MV G P+ T+ + + L K + F ++++++ ++P I
Sbjct: 319 EMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKE 378
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
D+ A + + + E G++P + L+ G +G
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVG 414
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 9/272 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG + A MVE+ P + Y T + +G D A + + MK E
Sbjct: 331 GYCREGKLARAEMLLVRMVEQ-GLKP-NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF 388
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K ++ + G + I Y ++ C +
Sbjct: 389 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF--DKITYTILITEHCKQGHITYA 446
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD+MV +G PD Y + + +++ E + FF + + PT + I
Sbjct: 447 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 506
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ ++ +++NG + L+ GL RL + + E ML++R++
Sbjct: 507 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 566
Query: 241 DVTMQKLKKAFYNESR-----SMRDRFDSLER 267
+VT L + + S+ DR D ++
Sbjct: 567 EVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQ 598
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 6/186 (3%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R K V E F R M P + ++ +D L K + + MVG G L PN
Sbjct: 231 RFKDVSE---FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG--LKPN 285
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFF 159
+ + ++ LC + FR F +++ ++ P+ TY ++ + K+ E
Sbjct: 286 VYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL 345
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M++ +P T I + A E+ N + + G LP + N ++ G
Sbjct: 346 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 405
Query: 220 GRLSDV 225
G++ +
Sbjct: 406 GKIQEA 411
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 115/255 (45%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + G + EA K F EM + +V Y + L R Q+ A M C
Sbjct: 264 GWCRAGEISEAEKVFKEM--KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N + + VK + +Q+++ M +G P+ I YN ++ C + +++N
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE--PDTITYNFLIEAHCRDENLENA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M+ ++ T+N IF + K + V+ + +M++ + +P + + M
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
+ + + +++ + + + P + +L+ +G ++ + +EM+ + L
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 239 ---IYDVTMQKLKKA 250
+Y++ + +L++A
Sbjct: 500 SLSLYEMVLAQLRRA 514
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 30 LAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++ ETF I + +R EA+ M+ C P FS + L + ++
Sbjct: 184 ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D + P++I+Y +V C ++ + F +M G P+ TY+++ + L
Sbjct: 244 FD---SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ ++ + F +M+ + P + + + + A E ++++N + + G P
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 207 ASANVLL 213
+ N L+
Sbjct: 361 ITYNFLI 367
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G EA F M E + P+ + A+ + L R ++ EA F +K +
Sbjct: 196 YVRAGLASEAVHCFNRM-EDYGCVPDKI-AFSIVISNLSRKRRASEAQSFFDSLK-DRFE 252
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++N + + + + +++ M G PN+ Y+ V+ LC +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIE--PNVYTYSIVIDALCRCGQISRAH 310
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M+ G P+++T+N + +K + +V +++M K +P
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + R + L L M+ + PTL + + ++ L K D L+
Sbjct: 995 HVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLF 1054
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M GF+ PN+ +YN+V+ LCN QM G PD +T+N + L
Sbjct: 1055 LEMRKRGFS--PNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLC 1112
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + E+F E I+ E P L+ I E A ++ ++ G P
Sbjct: 1113 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1172
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKK 249
+ L+ GL G++S+ E+M R++ IY+V + L K
Sbjct: 1173 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1218
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV E FL IR + L + ++ G F A D+LV++ HT
Sbjct: 1116 HVRKAEHFLREAIRRELNPNQLSYTPLIHG---FCMRGELMVASDLLVEMMGRGHT---- 1168
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P+++ + A++ L V ++M FPD YN++ L
Sbjct: 1169 -----------PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1217
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + +N EM++ QP AT I + ++ A +I+ ++ G+ P
Sbjct: 1218 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1277
Query: 208 SANVLLVGLRNLGRLSDV 225
S N ++ G G +S+
Sbjct: 1278 SCNAMIKGYCQFGMMSEA 1295
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 58/144 (40%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +P+++ YN ++ C D+ +M G P +TY + L K +
Sbjct: 989 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLE 1048
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + F EM K + P + I L + A+ I + +G P + N L+
Sbjct: 1049 KIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLM 1108
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
GL + G + F E + R +
Sbjct: 1109 TGLCHEGHVRKAEHFLREAIRREL 1132
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F +A+D + + + +D M + + PN+ +YN VV + D+D RF+ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRL-IDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M A PD T+N++ ++ K + F EM + +P ++ T I L + +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E +++ ++E G EA+ +L+ GL GR+ D ++LN+R+L +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 247 LKKAFYNESRSMRDRFDSLERRWKTSQ 273
L + E++++R + +E WK Q
Sbjct: 339 LVEKLCGENKAVR-AMEMMEELWKKGQ 364
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
F M + P +V Y T + ++ +D+AL+F + M E P + F+ ++
Sbjct: 179 AFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 237
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ + + L+ M G PN++ +N ++ ++ ++ + +M+ G
Sbjct: 238 YCRSSKFDLALDLFREMKEKGCE--PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 295
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
T ++ + L + +V + +++ P+ + + + L ++ A+E+
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + G P + L+ GLR GR F E+M+N IL VT
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVT 405
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 91/256 (35%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ +A + + M + E V + + R + D AL R MK + C
Sbjct: 202 GYVKSGDMDKALRFYQRMGK--ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGC 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + + V++ M+ +G + +V LC VD+
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF--SEATCEILVDGLCREGRVDDA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ P Y + E L K E+ K P + C T +
Sbjct: 318 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + E A ++ GILP + N+LL L + +D R ++
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLGDLCSSDHSTDANRLRLLASSKGYEPD 437
Query: 241 DVTMQKLKKAFYNESR 256
+ T L F E R
Sbjct: 438 ETTYHVLVSGFTKEGR 453
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + + R K + AL LR M+ P +K + + L T +Q D M+
Sbjct: 513 YNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEML 572
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF--------------------------- 124
+GF +P+++ Y+A + LC +VDN F
Sbjct: 573 KMGF--LPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGK 630
Query: 125 --------DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++M+ G FP +TYN++ + K+ + + ++MI E PT + +
Sbjct: 631 LSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTS 690
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L P+ AI +W+ +++ G P + + + GL R+ + EEM+ +
Sbjct: 691 LIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTK 749
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
++ + L + K++D AL ++ M G C L F++ + L L+ +++++M
Sbjct: 442 SFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLM 501
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L+P+ YN++ +C D + M +G P + + L +
Sbjct: 502 KNLG--LIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISG 559
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E F EM+K + P + + A+ L E + A+ I+ I LP + N
Sbjct: 560 RITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVAHN 619
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+L+ G R G+LS+ + EEML + + VT
Sbjct: 620 ILINGFRISGKLSEAQEVMEEMLEKGLFPSIVT 652
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +AN F M +R W EHVL + + +VD A++ L M+ P+ K
Sbjct: 225 GRPDDANGVFERMSQR-GWVDEHVLT--ILAVAFSKWGKVDGAVELLGRMELLGMRPSEK 281
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S + K ++++D M GF + L MY+ ++ LC ++ + F+
Sbjct: 282 TLSVLVHGFAKQLRLDKAMEMFDKMGSYGF--VAGLPMYSVLIEGLCQKKEIGKAVKLFE 339
Query: 126 QMVFHGAFPDSLTYNMIFECLIK 148
+M PD+ + E +
Sbjct: 340 EMKRGEVAPDARLLKKMLEAFCR 362
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M + P V+AY T + L+R Q+D+A M P + +S+ + L K
Sbjct: 197 MADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKT 256
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
Q++ MV G +MP+ IMY ++V C++ F +M HG PD +
Sbjct: 257 QAMDKATQVFTRMVKNG--VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 314
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
TY + + L KN K E F ++K +P
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 346
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG +VE + M+++ H+ + + + +VDEAL M+ +
Sbjct: 357 GYATEGALVEMHDLLDLMMKKGMQLGHHI--FNMIMGAYAKHNKVDEALLVFSNMRQQGL 414
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + LDIL + ++ + G L PN++++ ++ LC + D V
Sbjct: 415 NPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG--LAPNIVVFTTLIHGLCTCDKWDKV 472
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
+M+ G D++ +N I L K +V E +N F M++ +P T I
Sbjct: 473 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 532
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
LD E A+++ ++ NG+ P + + N ++ G GR+ D EM +N
Sbjct: 533 YCLDGKMDE-AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNP 591
Query: 236 RILIYDVTMQKLKKA 250
I+ Y++ +Q L +A
Sbjct: 592 GIVTYEMLLQGLFQA 606
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 3/215 (1%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
R E NP + R ++D LR M C P L ++ L L S
Sbjct: 131 RHEPNPLQSSSQGPLCTAGGRAMRMD---IVLRRMPELGCKPDLFSYTILLKGLCDDKTS 187
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ L IM +++ Y V+ L +D + FD M+ G PD +TY+
Sbjct: 188 QQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYS 247
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
I L K + + + F M+KN P + + + + +P+ AI I+ + +
Sbjct: 248 SIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRH 307
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
G+ P + L+ L G+ ++ R+ + ++ R
Sbjct: 308 GVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 342
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 39/274 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG + +A F M++R +P+ V+ Y + + L + + +D+A + M
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGP-SPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGV 274
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + + ++ M G P+++ Y A++ LC N
Sbjct: 275 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE--PDVVTYTALMDYLCKNGKSTEA 332
Query: 121 FRFFDQMVFHGAFPDSLTY-----------------------------------NMIFEC 145
+ FD +V G PDS TY NMI
Sbjct: 333 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 392
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ KV E F M + P +N T + +L A + A+ +N + G+ P
Sbjct: 393 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 452
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L+ GL + V A EM++R I +
Sbjct: 453 IVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICL 486
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 14/225 (6%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K V EA F M ++ NP+ ++ Y T L L +VD+AL +K E
Sbjct: 393 YAKHNKVDEALLVFSNMRQQ-GLNPD-IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 450
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP-----NLIMYNAVVGLLCNNND 116
P + F+ + L T WD + + F ++ + I +NA++G LC
Sbjct: 451 PNIVVFTTLIHGLC-------TCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGR 503
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FD MV G P++ TYN + + + K+ E M+ N +P+ + T
Sbjct: 504 VIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNT 563
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
I E + + + G+ P + +LL GL GR
Sbjct: 564 IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 608
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 4/224 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F +MV R +P +V Y + ++ +++ L F+R M+ E P + ++
Sbjct: 190 DAERVFRDMV-RNGVSP-NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D K + L M G + NLI YN+V+ LC + V ++M
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGG--VAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TYN + K +H+ EM+ P + T I + A
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A+EI++ + G+ P E + L+ G G +++ + EM+
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ A + F +M R E Y T + + ++EA K L M P+
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERT--YTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + L V + MV G L P+++ Y+ V+ C ++ F+
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERG--LPPDVVSYSTVIAGFCRERELGKAFQM 474
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++MV G PD++TY+ + + L +K+ E + F EM++ P + + I
Sbjct: 475 KEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV 534
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E A+ + + +++ G LP + +VL+ GL R +R ++ + DVT
Sbjct: 535 DGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVT 594
Query: 244 MQKL 247
L
Sbjct: 595 YNTL 598
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 101/243 (41%), Gaps = 4/243 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+++Y + + L ++ E + + M+G+ P ++ ++ K + + L
Sbjct: 277 LISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLS 336
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MVG G L PN++ Y ++ +C ++ FDQM G P+ TY + + +
Sbjct: 337 EMVGKG--LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQ 394
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++E EMI + + P+ + + + A+ I ++E G+ P S
Sbjct: 395 KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVS 454
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR--DRFDSLE 266
+ ++ G L + EEM+ + +L VT L + + + + D F +
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514
Query: 267 RRW 269
RR
Sbjct: 515 RRG 517
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 99 PNLIMYNAVVGLL-----CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
P ++ YNAV+ L N+ D D+ R F MV +G P+ TYN+I ++ +
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLE 224
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ F +M K P + T I + + A+ + + G+ S N ++
Sbjct: 225 KGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
GL GR+S+V EEM + ++ +VT L F E
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH-----TVQLWDIMVGIGFNLMP 99
V +AL L + PT+ ++ LD L++ + S H +++ MV G + P
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVS--P 205
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N+ YN ++ + + D++ F +M G P+ +TYN + + K KKV E
Sbjct: 206 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 265
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M ++ + I L E+ + G++P E + N L+ G
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325
Query: 220 GRLSDVRRFAEEMLNR----RILIYDVTMQKLKKAFYNESRSMRDRFDSLERRW 269
G L EM+ + ++ Y + + KA N SR++ + FD + R
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG-NLSRAV-EIFDQMRVRG 377
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ +A +M++ HV Y T + L+ + ++A++ R M C
Sbjct: 138 GLCKEANLDKAVSVLNDMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTVRC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L M+ G N P++I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLN--PSVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ G PD +N++ L K + + +M N W+ P N T T+
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDM--NRWKCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW +L NG+ P S N+ L GL + R+ D F + + ++
Sbjct: 311 MEGFYKDGD-IRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKK 369
Query: 237 ILIYDVT 243
I+ +T
Sbjct: 370 IVPTKIT 376
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 2/229 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E + Y + + ++++L L + + + +S ++ L K + V +
Sbjct: 92 EDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSV 151
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M+ G PN +YN ++ L + ++ R F +M P +TYN + L
Sbjct: 152 LNDMIKSGCK--PNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGL 209
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
KN+ E + EM++ P+ + + + L + E A+++WN ++ G P
Sbjct: 210 CKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDV 269
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N+L+ GL ++G+ +M + VT L + FY +
Sbjct: 270 QMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDG 318
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 25/255 (9%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK---FLRVMKGENC 60
K G+++E K G +V+ Y T + + ++ + K L+ M+ +
Sbjct: 181 KAGDIIEDMKVRGV--------SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGI 232
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ +D K + + ++++ M G + PN++ YN+++ LCNN V+
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG--VKPNVVTYNSLINGLCNNGKVNEA 290
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
DQMV P+ +T+N + KNK V + F +M K P T +
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN----VTTYNI 346
Query: 181 LLDA---DEP-EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
L+DA DE E A ++ +L G+ P ++ N L+ GL G L R EM
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 233 LNRRILIYDVTMQKL 247
L ++ Y++ + L
Sbjct: 407 LKADLITYNILIDSL 421
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ NV A K F EM R P +V+ Y + + L +V+EA M
Sbjct: 245 GFCKDKNVSAAMKVFAEM-NRQGVKP-NVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L+ K +L+D M G + PN+ YN ++ C + ++++
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG--ITPNVTTYNILIDAYCKDENMEDA 360
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + M+ G PD TYN + L + + N EM + + I
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E + A+ + + + G+ P + + N ++ G G L +M
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 9/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V EA +MV P +++ + L + K V +A + M +
Sbjct: 280 GLCNNGKVNEATALRDQMVNSC-LKP-NIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + L+ IM+G G + P++ YN ++ LC D++
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG--VCPDVSTYNCLIAGLCRKGDLEAA 395
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M D +TYN++ + L ++ + EM + +P+ L T I
Sbjct: 396 RNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDG 455
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
A+ + + + + G L A+ NVL+ G +L D EML + +
Sbjct: 456 YCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPN 515
Query: 238 -LIYD-VTMQKLKKAF 251
+ Y+ VT + ++K F
Sbjct: 516 RMTYEIVTEEMMEKGF 531
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV---HEV 155
P LI +N V+ LC ++ + M G + +TYN + + K K+ ++
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ EM + P + I A++++ + G+ P + N L+ G
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280
Query: 216 LRNLGRLSDVRRFAEEMLN 234
L N G++++ ++M+N
Sbjct: 281 LCNNGKVNEATALRDQMVN 299
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ A EM + ++ Y + +L ++ +AL+ L M +
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHL--KADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ +D K + + L M +G + N+ YN ++ C + +++
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR--LANVATYNVLIKGFCKKDKLEDA 500
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
++M+ G P+ +TY ++ E +++ V ++E +++
Sbjct: 501 NGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+A+ L L K+ +A+ LR M C P + ++ L L N S ++L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G + P+++ Y V+ D+D + + +M+ G P+ +TY+ I L
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + + M+KN P NC T +++ + +P+ AI + +G+ P
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMP---NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ L GR ++ R+ + M R
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V++Y T + + +D+A M P + +S+ + L K ++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ MV G +MPN YN++V C++ F +M G PD +TYN + +
Sbjct: 256 VLTSMVKNG--VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENG 201
L KN + E F M K +P T LL + A+ + + ++ NG
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 202 ILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
I P ++L+ G++ + ++ LN + Y + L K+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + +VD+A+ M+ +
Sbjct: 348 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K ++ ++ M I L P I+YN+++ LC + D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G D++ +N I + K +V E E F M++ +P + +T I
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRR 236
A + + A ++ ++ G+ P + N L+ G + R+ D R ++
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 584 IITYNIILQGL 594
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A + F +M++ +P +++ Y + + +L + D+A + L ++ C
Sbjct: 421 KSGRVEDAMRYFEQMIDE-RLSPGNIV-YNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I Y+ ++ C +D +
Sbjct: 479 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEATK 535
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TYN + K ++ + F EM + P + + L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I E+G ++ N++L GL
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++++AL R M+
Sbjct: 523 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC NN D
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEA 638
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ L+K + E ++ F + N P
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F +A+D + + + +D M + + PN+ +YN VV + D+D RF+ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRL-IDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M A PD T+N++ ++ K + F EM + +P ++ T I L + +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E +++ ++E G EA+ +L+ GL GR+ D ++LN+R+L +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 247 LKKAFYNESRSMRDRFDSLERRWKTSQ 273
L + E++++R + +E WK Q
Sbjct: 339 LVEKLCGENKAVR-AMEMMEELWKKGQ 364
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 3/244 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
F M + P +V Y T + ++ +D+AL+F + M E P + F+ ++
Sbjct: 179 AFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 237
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ + + L+ M G PN++ +N ++ ++ ++ + +M+ G
Sbjct: 238 YCRSSKFDLALDLFREMKEKGCE--PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 295
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
T ++ + L + +V + +++ P+ + + + L ++ A+E+
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + G P + L+ GLR GR F E+M+N IL VT L + +
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS 415
Query: 254 ESRS 257
S
Sbjct: 416 SDHS 419
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 91/256 (35%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ +A + + M + E V + + R + D AL R MK + C
Sbjct: 202 GYVKSGDMDKALRFYQRMGK--ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGC 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + + V++ M+ +G + +V LC VD+
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF--SEATCEILVDGLCREGRVDDA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ P Y + E L K E+ K P + C T +
Sbjct: 318 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + E A ++ GILP + N+LL L + +D R ++
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPD 437
Query: 241 DVTMQKLKKAFYNESR 256
+ T L F E R
Sbjct: 438 ETTYHVLVSGFTKEGR 453
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 3/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA + EM ER V+ Y T + + +AL+ L M+ +
Sbjct: 318 GLCQAGKVDEAFRLKDEM-ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGV 376
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
TL + + L K + + + M G L P++I YN ++ C ++
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDG--LAPDVITYNTLIHAHCKAGNIAKA 434
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+MV G D+ T N + L K K+ E + + + P ++ T +
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A+ +W+ ++E + P ++ N L+ GL +GRL + E++ + ++
Sbjct: 495 YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPD 554
Query: 241 DVTMQKLKKAFYNE 254
D T + A+ E
Sbjct: 555 DTTYNIIIHAYCKE 568
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G + +A T M + F +P+ V Y T L R + EA L MK + PT
Sbjct: 217 KGTLADALSTLSTM-QGFGLSPDAV-TYNTLLNAHCRKGMLGEARALLARMKKDGVAPTR 274
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ + +L ++ + M GF P+L YN + LC VD FR
Sbjct: 275 PTYNTLVSAYARLGWIKQATKVVEAMTANGFE--PDLWTYNVLAAGLCQAGKVDEAFRLK 332
Query: 125 DQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M G PD +TYN + + K + + EM + + T + I L
Sbjct: 333 DEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCK 392
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E E A+ N + ++G+ P + N L+ G ++ +EM+ R + + T
Sbjct: 393 DGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFT 452
Query: 244 MQKLKKAFYNESRSMR 259
L YN + R
Sbjct: 453 ---LNTVLYNLCKEKR 465
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 110/296 (37%), Gaps = 47/296 (15%)
Query: 4 KEGNVVEANKTFGEMVER------FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
K GN+ +A EMV R F N T L L + K+ +EA L+
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLN--------TVLYNLCKEKRYEEAQGLLQSPPQ 478
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV----------------GIGF------ 95
P + + K +S ++LWD M+ G+
Sbjct: 479 RGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKE 538
Query: 96 -----------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+P+ YN ++ C D++N F+F ++MV + PD +T N +
Sbjct: 539 AIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L N K+ + F ++ + + T I + + + A+ + + G+ P
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP 658
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRD 260
+ NV+L L GR + + ++ L + LK + +E+ S +D
Sbjct: 659 DAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKD 714
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 70/181 (38%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L+ + L L + ++ L + L PN +N +V C+ + +
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
M G PD++TYN + + + E M K+ PT T ++
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ + NG P + NVL GL G++ + R +EM L+ D
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344
Query: 242 V 242
V
Sbjct: 345 V 345
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 10/274 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVL---AYETFLITLIRGKQVDEALKFLRVMKGENC 60
K G+ EA+ F M WN A+ + L L ++ EA+ L +M +
Sbjct: 312 KSGHASEAHNVFCRM-----WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGI 366
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L KL + L+D M G ++P++ YN ++ VD
Sbjct: 367 VTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG--IIPDVFTYNIMISSYGRVGLVDKA 424
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M PD +TYN + CL K+ + E F EM + + P + I
Sbjct: 425 SELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIEC 484
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+++ E A +++ ++ G P + N+LL L G+ + + E M + ++
Sbjct: 485 FGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPD 544
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+T L++ R++R R + W S +
Sbjct: 545 SITYSILERLESRSQRTVRIRKPTRISGWVVSPL 578
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + VD+A + MK ++C P ++ + + K ++ + +D
Sbjct: 163 IFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFD 222
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI +N ++ L N VD V +MV + P+ TY++ + L
Sbjct: 223 EMVSKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILAT 280
Query: 149 NKKVHEV 155
++H +
Sbjct: 281 EGQLHRL 287
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y+ + +R ++V + + M+ + + ++ LD L K Q+++ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ +P+ Y ++ + FFD+MV G + + +N I E L KNK
Sbjct: 190 KQK--HCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNK 247
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITML 181
V +V +M++N+ QP + + +L
Sbjct: 248 MVDKVIFVLSKMVENDCQPNQFTYSITLDIL 278
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG+V A + F E + P+ ++ Y + + L + AL+ + M E C
Sbjct: 335 GLCAEGDVERALELFNEAQAK-GIKPD-IVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392
Query: 61 FPTLKFFSNALDILVKL-NDSTHTVQLWD-IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ ++ ++ L K+ N S TV + D IM G +P++ +N ++ C +D
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG----YLPDVFTFNTLIDGYCKRLKLD 448
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M +G PD++TYN + L K KV+EV F EMI P P+ I
Sbjct: 449 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+++ E A ++ + + G+ P S N L+ G G L
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 112/295 (37%), Gaps = 65/295 (22%)
Query: 4 KEGNVVEANKTFGEMVER------FEWN------------PE--------------HVLA 31
K G+V+EA G++++R F +N PE V+
Sbjct: 199 KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVT 258
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L + EA+ +LR M + C P ++ +D K++ +L V
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 318
Query: 92 GIGF---------------------------------NLMPNLIMYNAVVGLLCNNNDVD 118
GF + P++++YN++V LC +
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M G PD TYN++ L K + + ++ I + P T I
Sbjct: 379 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A+++ + E GI P + N +L GL G++++V +EM+
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 36/257 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+AY T + L +A + M + FP L F+ L L K D L
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211
Query: 89 --IMVGIGFNL------------------------------MPNLIMYNAVVGLLCNNND 116
I G+ NL +P+++ YN ++ LC +
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSM 271
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ +M+ G PD TYN I + K V E + + + P + +
Sbjct: 272 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 331
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG----RLSDVRRFAEEM 232
I L + E A+E++N GI P N L+ GL G L + AEE
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 233 LNRRILIYDVTMQKLKK 249
+ I Y++ + L K
Sbjct: 392 CHPDIQTYNIVINGLCK 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V E N+TF EM+ + NP + Y + R +++EA K + M E
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNP---ITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P F+ + + D L+ + G++ + +N ++G ++
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD--TFNTLIGAFSGKLNMHM 589
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ FD+M+ G DS TY ++ + K V EMIK + P+ I
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
L A+ I + +++ G++P
Sbjct: 650 SLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ +A + + + + P+ V + T + + ++D AL+ + M
Sbjct: 405 GLCKMGNISDATVVMNDAIMK-GYLPD-VFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L+ L K + + M+ G + PN I YN ++ C +N ++
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH--PNPITYNILIENFCRSNKMEEA 520
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ +M G PD++++N + +N + F ++ + + T
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 19/239 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNV++ G +V+ + P L L K+ +A+ LR M
Sbjct: 110 GFAALGNVIKK----GFIVDAIAFTP--------MLKGLCADKRTSDAMDIVLRRMTQLG 157
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ L L N S ++L +M G + P+++ Y V+ D+D
Sbjct: 158 CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + +M+ G P+ +TY+ I L K + + + M+KN P NC T +
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP---NCRTYNS 274
Query: 180 ML---LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ + +P+ AI + +G+ P + N L+ L GR ++ R+ + M R
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V++Y T + + +D+A M P + +S+ + L K ++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ MV G +MPN YN++V C++ F +M G PD +TYN + +
Sbjct: 256 VLTSMVKNG--VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENG 201
L KN + E F M K +P T LL + A+ + + ++ NG
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 202 ILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
I P ++L+ G++ + ++ LN + Y + L K+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + +VD+A+ M+ +
Sbjct: 348 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K ++ ++ M I L P I+YN+++ LC + D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G D++ +N I + K +V E E F M++ +P + +T I
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
A + + A ++ ++ G+ P + N L+ G + R+ D EM ++
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 584 IITYNIILQGL 594
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A + F +M++ +P +++ Y + + +L + D+A + L ++ C
Sbjct: 421 KSGRVEDAMRYFEQMIDE-RLSPGNIV-YNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I Y+ ++ C +D +
Sbjct: 479 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEATK 535
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TYN + K ++ + F EM + P + + L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I E+G ++ N++L GL
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++++AL R M+
Sbjct: 523 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC NN D
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEA 638
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ L+K + E ++ F + N P
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G ++ AL+ M C T + N L
Sbjct: 114 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ I YN V LC N+ V + + D MV G PD
Sbjct: 174 RVEDALGYIQQE---IADGFE--PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN++ CL KN ++ E + ++M+ P T I L + E A+++
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ G+ P + N+L+ L +G R EEM N +VT L
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G+ +EG++ A + M+E A + + LI G +V++AL +++
Sbjct: 133 GFVEEGSIEAALRVKARMLEM------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P ++ ++ L + + H +++ D+MV G + P++ YN VV LC N
Sbjct: 187 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD--PDVFTYNIVVNCLCKNGQ 244
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +QMV G PD T+N + L ++ E + ++ P
Sbjct: 245 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
I L +P A+ ++ + +G P E + N L+ L +LG+L ++M
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364
Query: 233 LNRRILIYDVTMQKL-KKAFYNESRSMRDRFD 263
R + Y+ + L KK E+ + D+ D
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
P+ V Y T + L ++ +AL L+ M+ C + ++ +D L K
Sbjct: 330 CTPDEV-TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 388
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+++D M G + N I +N ++ LC + +D+ F +QM+ G P+++TYN I
Sbjct: 389 EEVFDQMDLQGIS--RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
K + + + M N ++ + T I L A + A+++ + G+
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + N +L L + D EM
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREM 535
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 5/266 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +V A K MV+ E + V Y + L + Q++EA L M C
Sbjct: 203 GLCQNDHVGHALKVMDVMVQ--EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L N + L + G + P++ +N ++ LC D
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLA 318
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN + + L K+ + + +M + + T I
Sbjct: 319 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 378
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+++ + GI + N L+ GL ++ D +M++ +
Sbjct: 379 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 438
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLE 266
++T + Y + ++ D LE
Sbjct: 439 NITYNSI-LTHYCKQGDIKKAADILE 463
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 3/211 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T + L + +++EA + M + F+ +D L K +
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + M+ G L PN I YN+++ C D+ + M +G D +TY +
Sbjct: 426 LINQMISEG--LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 483
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M +PTP + L + A+ ++ + E G P
Sbjct: 484 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 543
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL R G + + F EM+++
Sbjct: 544 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 79 DSTHTVQLWDIMVGIG-------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
DS QL+D V + F + + ++YN ++ +L + + + + +M G
Sbjct: 25 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 84
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD +T+N + + L + +V EM P T + ++ E A+
Sbjct: 85 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 144
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ +LE G + + NVL+ G LGR+ D + ++
Sbjct: 145 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 184
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 8/235 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A + G MV++ P +V AY T + +L + +QV EA M +
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQK-NCQP-NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 232
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L L + H L + MV +MP+++ +N VV LC V
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMV--DSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D+M+ G P+ +TY + + CL+ ++ E F M+ P ++ T I
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLL--SEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A+ ++ + ++P + + L+ GL ++ RL D EM+
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG ++ EAL M GE P + + ++ L K+ +++ ++L MV
Sbjct: 136 TLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N PN+ YN ++ LC + V F F +MV G PD TYN + L +
Sbjct: 196 --NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V +EM+ ++ P ++ T + L + A ++ + +++ G+ P + L+
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Query: 214 VGLRNLGRLSDVRRFAEEMLNR----RILIYD------VTMQKLKKAFY 252
G L + + + + M+ + ++ Y+ +Q++ KA Y
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 362
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A FGEM R E P+ V Y T + L +++ +A+ M +
Sbjct: 350 GYCKIQRIDKAMYLFGEMC-RQELIPDTV-TYSTLIHGLCHVERLQDAIALFHEMVACSQ 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K + + + ++ I G NL P++ + N + +C +++
Sbjct: 408 IPNLVTYRILLDYLCK---NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G PD TY+++ L + + E F EM +N T
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 524
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
L +E AI++ ++ G +AS L V
Sbjct: 525 GFLRNNETSRAIQLLQEMVARG-FSADASTMTLFV 558
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F EMV + +++ Y L L + + + EA+ L+ ++G N P ++ +
Sbjct: 394 DAIALFHEMVACSQI--PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
A+D + + + L+ + G L P++ Y+ ++ LC +D + F +M
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKG--LQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+G + YN I ++N + EM+ + + ML D
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ FD+M+ G PD +TY + L K M++ QP T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L + A +++ ++ GI P + N L+ L NL V EM++ +
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 237 ILIYDVTMQKLKKAFYNESR 256
I+ V+ + A E +
Sbjct: 267 IMPDVVSFNTVVDALCKEGK 286
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 60/144 (41%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
F + PN+ + ++ C+ N V F +++ G PD+ T+ + + K+
Sbjct: 89 SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIG 148
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + F +MI ++P + T I L AI + +++ P + N ++
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
L ++++ EM+ + I
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGI 232
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG V EA+ M+ R E N V+ Y + +VD A+K M ++C
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPN---VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ ++ K+ + L++ M L PN + YN ++ LC+ + +
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSR--QELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +MV G PD +TY + + L KN+ + + + + W P T + +
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A E E A ++++ + G+ P + N+++ GL G L++ + EM D
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 243 TMQKLKKAFYNESRSMR 259
T + + F + ++R
Sbjct: 527 TYNLITRGFLRNNEALR 543
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 49/275 (17%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPN---VVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + FS +D L K T ++ M+ G + PN++ YN+++ LC + +
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGIS--PNIVTYNSLIHGLCKLCEWKH 263
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V ++MV PD T N + + L K V E + MI +P
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN----VVTYN 319
Query: 180 MLLDA----DEPEFAIEIWNYILE--------------NG-------------------- 201
L+D +E + A+++++ ++ NG
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 202 -ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ P + N L+ GL ++GRL D EM+ R
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 414
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 34 TFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
T TLIRG ++ EAL M GE P + + ++ L K+ +++ ++L
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M N PN+++++ ++ LC + V F F +M+ G P+ +TYN + L K
Sbjct: 201 MEQ--GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ V +EM+ ++ P T + L A ++ + ++ G+ P +
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318
Query: 210 NVLLVG--LRN 218
N L+ G LRN
Sbjct: 319 NALMDGHCLRN 329
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 14/244 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A F EM R E P V Y T + L ++ +A+ M
Sbjct: 359 GYCKIQSVDKAMYLFEEM-SRQELTPNTV-TYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + D L K + H + ++ I G N P++ +Y ++ +C ++++
Sbjct: 417 IPDLVTYRTLSDYLCK---NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TYN++ L K + E F EM KN P
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD--VRRFAEEMLNRRI 237
L +E IE+ +L G ++ S LLVG+ LSD + + +++L + +
Sbjct: 534 GFLRNNEALRTIELLEEMLARG-FSVDVSTTTLLVGM-----LSDDGLDQSVKQILCKIV 587
Query: 238 LIYD 241
++Y+
Sbjct: 588 ILYE 591
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ L+D M+G GF PN++ Y ++ LC + R M P+ + ++ +
Sbjct: 160 LHLFDKMIGEGFQ--PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K+++V E N F EMI P + + I L E + + N ++++ I+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P + N ++ L G +++ + M++R +
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA TF M+ + P + + L ++ + K L R M P + +
Sbjct: 53 EALSTFNRMLHK--QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ L LN ++ +G P+ + ++ LC + FD+M+
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P+ +TY + L K M + QP + +T I L +
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A I++ ++ GI P + N L+ GL L V EM++ +I+ T+ +
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 250 AFYNES 255
A E
Sbjct: 289 ALCKEG 294
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G ++ AL+ M C T + N L
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ I YN V LC N+ V + + D MV G PD
Sbjct: 266 RVEDALGYIQQE---IADGFE--PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN++ CL KN ++ E + ++M+ P T I L + E A+++
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ G+ P + N+L+ L +G R EEM N +VT L
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G+ +EG++ A + M+E A + + LI G +V++AL +++
Sbjct: 225 GFVEEGSIEAALRVKARMLEM------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P ++ ++ L + + H +++ D+MV G + P++ YN VV LC N
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD--PDVFTYNIVVNCLCKNGQ 336
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +QMV G PD T+N + L ++ E + ++ P
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
I L +P A+ ++ + +G P E + N L+ L +LG+L ++M
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 233 LNRRILIYDVTMQKL-KKAFYNESRSMRDRFD 263
R + Y+ + L KK E+ + D+ D
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ A + F EM + P+ V Y T + L ++ +AL L+ M+ C +
Sbjct: 403 KVGDPHLALRLFEEM-KNSGCTPDEV-TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K +++D M G + N I +N ++ LC + +D+ F
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR--NAITFNTLIDGLCKDKKIDDAFEL 518
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+QM+ G P+++TYN I K + + + M N ++ + T I L
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A+++ + G+ P + N +L L + D EM
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +V A K MV+ E + V Y + L + Q++EA L M C
Sbjct: 295 GLCQNDHVGHALKVMDVMVQ--EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L N + L + G + P++ +N ++ LC D
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN + + L K+ + + +M + + T I
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+++ + GI + N L+ GL ++ D +M++ +
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530
Query: 241 DVT 243
++T
Sbjct: 531 NIT 533
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 3/211 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T + L + +++EA + M + F+ +D L K +
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + M+ G L PN I YN+++ C D+ + M +G D +TY +
Sbjct: 518 LINQMISEG--LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M +PTP + L + A+ ++ + E G P
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL R G + + F EM+++
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 79 DSTHTVQLWDIMVGIG-------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
DS QL+D V + F + + ++YN ++ +L + + + + +M G
Sbjct: 117 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 176
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD +T+N + + L + +V EM P T + ++ E A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ +LE G + + NVL+ G LGR+ D + ++
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
Length = 817
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 39/258 (15%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + F +M + + P Y + + R K A LR M+ + P +K +
Sbjct: 490 EAYEIFNQMKD-LDLKPSE-FTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTE 547
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF----- 124
+ L T +Q D M+ +GF +P+++ Y+A + +C + +N F
Sbjct: 548 MVQQLCFSGRITEALQFLDEMLKLGF--LPDIVTYSAAMNGMCKIGETENALGLFRDISS 605
Query: 125 ------------------------------DQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++M+ G FP +TYN++ + K+ K+ +
Sbjct: 606 KCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDK 665
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ ++MI E PT + + + L +A P+ AI +W + E G P E + +
Sbjct: 666 AISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFIN 725
Query: 215 GLRNLGRLSDVRRFAEEM 232
GL GR + EEM
Sbjct: 726 GLCKCGRTETAVNYYEEM 743
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 103/257 (40%), Gaps = 40/257 (15%)
Query: 25 NPEHVLAYETFLITLIRGKQV---DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
N V A L +++RG Q D+ + V+ E+ P F+ + L K+
Sbjct: 395 NHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLD 454
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ L MVG+G L+M+N ++ LCN++ +D + F+QM P TYN
Sbjct: 455 LALALTKDMVGLGCK--GKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNS 512
Query: 142 IFECLIKNK-----------------------------------KVHEVENFFHEMIKNE 166
+F + + K ++ E F EM+K
Sbjct: 513 LFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLG 572
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ P + + A+ + E E A+ ++ I LP + N+L+ G R G+ + +
Sbjct: 573 FLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQ 632
Query: 227 RFAEEMLNRRILIYDVT 243
EEML++ + VT
Sbjct: 633 EIMEEMLSKGLFPSVVT 649
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G EA + EM+ + + V+ Y + + ++D+A+ + M E
Sbjct: 621 GFRKAGKFDEAQEIMEEMLSKGLF--PSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEK 678
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ LD L + LW M G + PN I Y A + LC +
Sbjct: 679 PPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCS--PNEIAYTAFINGLCKCGRTETA 736
Query: 121 FRFFDQM 127
++++M
Sbjct: 737 VNYYEEM 743
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 28/222 (12%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +A+ M ER W EHVL + + +V++A++ + M+ P+ K
Sbjct: 222 GRPEDASAVLQRMSER-AWVDEHVLTM--LAVAFSKWGKVEDAVELIGRMEALGMQPSEK 278
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + + + ++D M GF++ +L MY+ ++ LC+ N++ + ++
Sbjct: 279 TLTVLVHGFARQGRVDVAMDMFDKMASYGFSV--DLAMYSVLIEGLCDGNEMGKAVKLYE 336
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M PD + E + V F +E A+ +
Sbjct: 337 DMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINE--------------NAVHL----- 377
Query: 186 EPEFAIEIWNYILENGIL---PLEASANVLLVGLRNLGRLSD 224
+P A+ ++N ILE G+ +EA++ +L +R R SD
Sbjct: 378 KPGSAVLLYNVILE-GLTNHGEVEAASQLLSSMVRGGQRGSD 418
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G ++ AL+ M C T + N L
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ I YN V LC N+ V + + D MV G PD
Sbjct: 266 RVEDALGYIQQE---IADGFE--PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN++ CL KN ++ E + ++M+ P T I L + E A+++
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ G+ P + N+L+ L +G R EEM N +VT L
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G+ +EG++ A + M+E A + + LI G +V++AL +++
Sbjct: 225 GFVEEGSIEAALRVKARMLEM------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P ++ ++ L + + H +++ D+MV G + P++ YN VV LC N
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD--PDVFTYNIVVNCLCKNGQ 336
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +QMV G PD T+N + L ++ E + ++ P
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
I L +P A+ ++ + +G P E + N L+ L +LG+L ++M
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 233 LNRRILIYDVTMQKL-KKAFYNESRSMRDRFD 263
R + Y+ + L KK E+ + D+ D
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ A + F EM + P+ V Y T + L ++ +AL L+ M+ C +
Sbjct: 403 KVGDPHLALRLFEEM-KNSGCTPDEV-TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K +++D M G + N I +N ++ LC + +D+ F
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR--NAITFNTLIDGLCKDKKIDDAFEL 518
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+QM+ G P+++TYN I K + + + M N ++ + T I L
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A+++ + G+ P + N +L L + D EM
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +V A K MV+ E + V Y + L + Q++EA L M C
Sbjct: 295 GLCQNDHVGHALKVMDVMVQ--EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L N + L + G + P++ +N ++ LC D
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN + + L K+ + + +M + + T I
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+++ + GI + N L+ GL ++ D +M++ +
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530
Query: 241 DVT 243
++T
Sbjct: 531 NIT 533
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 3/211 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T + L + +++EA + M + F+ +D L K +
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + M+ G L PN I YN+++ C D+ + M +G D +TY +
Sbjct: 518 LINQMISEG--LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M +PTP + L + A+ ++ + E G P
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL R G + + F EM+++
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 79 DSTHTVQLWDIMVGIG-------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
DS QL+D V + F + + ++YN ++ +L + + + + +M G
Sbjct: 117 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 176
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD +T+N + + L + +V EM P T + ++ E A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ +LE G + + NVL+ G LGR+ D + ++
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M + P V+AY T + L+R Q+D+A M P + +S+ + L K
Sbjct: 196 MADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKT 255
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
Q++ MV G +MP+ IMY ++V C++ F +M HG PD +
Sbjct: 256 QAMDKATQVFTRMVKNG--VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 313
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
TY + + L KN K E F ++K +P
Sbjct: 314 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG +VE + M+++ H+ + + + +VDEAL M+ +
Sbjct: 356 GYATEGALVEMHDLLDLMMKKGMQLGHHI--FNMIMGAYAKHNKVDEALLVFSNMRQQGL 413
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + LDIL + ++ + G L PN++++ ++ LC + D V
Sbjct: 414 NPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG--LAPNIVVFTTLIHGLCTCDKWDKV 471
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
+M+ G D++ +N I L K +V E +N F M++ +P T I
Sbjct: 472 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 531
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
LD E A+++ ++ NG+ P + + N ++ G GR+ D EM +N
Sbjct: 532 YCLDGKMDE-AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNP 590
Query: 236 RILIYDVTMQKLKKA 250
I+ Y++ +Q L +A
Sbjct: 591 GIVTYEMLLQGLFQA 605
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%)
Query: 52 LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLL 111
LR M C P L ++ L L S + L IM +++ Y V+ L
Sbjct: 158 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 217
Query: 112 CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+D + FD M+ G PD +TY+ I L K + + + F M+KN P
Sbjct: 218 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ + + + +P+ AI I+ + +G+ P + L+ L G+ ++ R+ +
Sbjct: 278 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337
Query: 232 MLNR 235
++ R
Sbjct: 338 LVKR 341
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 39/274 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG + +A F M++R +P+ V+ Y + + L + + +D+A + M
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGP-SPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGV 273
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + + ++ M G P+++ Y A++ LC N
Sbjct: 274 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE--PDVVTYTALMDYLCKNGKSTEA 331
Query: 121 FRFFDQMVFHGAFPDSLTY-----------------------------------NMIFEC 145
+ FD +V G PDS TY NMI
Sbjct: 332 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 391
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ KV E F M + P +N T + +L A + A+ +N + G+ P
Sbjct: 392 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 451
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L+ GL + V A EM++R I +
Sbjct: 452 IVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICL 485
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 14/225 (6%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K V EA F M ++ NP+ ++ Y T L L +VD+AL +K E
Sbjct: 392 YAKHNKVDEALLVFSNMRQQ-GLNPD-IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 449
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP-----NLIMYNAVVGLLCNNND 116
P + F+ + L T WD + + F ++ + I +NA++G LC
Sbjct: 450 PNIVVFTTLIHGLC-------TCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGR 502
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FD MV G P++ TYN + + + K+ E M+ N +P+ + T
Sbjct: 503 VIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNT 562
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
I E + + + G+ P + +LL GL GR
Sbjct: 563 IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 607
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L L+ ++ ALK L M G P + ++ L D QL+D ++ G
Sbjct: 206 LLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASG 265
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
P+ MY ++ C++ + + R D+M G P+ +TY+++ E K +K E
Sbjct: 266 RR--PDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTE 323
Query: 155 VENFFHEMIKNEWQP-TPLNCATAITMLLDADEPEFAIEIWNYI---------------- 197
+ EM+ + P TPL CA + +L + A E+W +
Sbjct: 324 ARDLTREMLGAGYVPDTPL-CAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLI 382
Query: 198 ------------------LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
LE G LP + N L++GL G L + R ++M+ RR
Sbjct: 383 YWLCKKGMVQEARKLFDELERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEP 442
Query: 240 YDVTMQKLKKAFYNESRS 257
+T + L K F +S
Sbjct: 443 NAMTYEALIKGFCKIGKS 460
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 9/255 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G++ A + F +++ P+ + Y + +++ +A + + M P
Sbjct: 248 KGDLEGAQQLFDDIIASGR-RPDATM-YTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNE 305
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S ++ K ST L M+G G+ +P+ + VV +LC + +
Sbjct: 306 VTYSVVIEACCKERKSTEARDLTREMLGAGY--VPDTPLCAKVVDVLCQDGKAGEANEMW 363
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
QMV PD+ + + L K V E F E+ + + P+ L + I L +
Sbjct: 364 RQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDELERG-FLPSLLTYNSLIIGLCEN 422
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIY 240
E + A +W+ ++E P + L+ G +G+ ++ +EM++R +Y
Sbjct: 423 GELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLY 482
Query: 241 DVTMQKLKKAFYNES 255
+ L K ++++
Sbjct: 483 QALVDSLSKPSHDDT 497
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PNL+ N ++ L D+++ + D+M+ G PD +TY + + +
Sbjct: 196 ITPNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 255
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVL 212
F ++I + +P AT T+L+D + + A I + + G+ P E + +V+
Sbjct: 256 QLFDDIIASGRRPD----ATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVV 311
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRIL--------IYDVTMQKLKKAFYNE 254
+ + ++ R EML + + DV Q K NE
Sbjct: 312 IEACCKERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANE 361
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G EAN+ + +MV++ P T + L + V EA K ++ P+
Sbjct: 352 QDGKAGEANEMWRQMVKKSV--PPDNTVVSTLIYWLCKKGMVQEARKLFDELE-RGFLPS 408
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L +++ + L + + ++WD MV + PN + Y A++ C + +
Sbjct: 409 LLTYNSLIIGLCENGELQEAGRVWDDMVERRYE--PNAMTYEALIKGFCKIGKSNEGYAL 466
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
F +M+ G P Y + + L K
Sbjct: 467 FKEMMSRGCTPSKFLYQALVDSLSK 491
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP+LK + L LVK N+ + Q++DIM G + P++ +++ +V C VD+
Sbjct: 159 FPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCG--VTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TYN I L KN ++ E F +M K +P+ + I
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L+ + + A I + + G P N L+ G +G +S + ++M++ I
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 241 DVTMQKLKKAF 251
VT L + +
Sbjct: 337 SVTCNSLIQGY 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 113/256 (44%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F E +E+ P ++ Y + L++ ++ DEA L+ M
Sbjct: 241 GLCKNGRLDEAFQ-FKEKMEKERVKPS-LVTYGVLINGLVKLERFDEANCILKEMSDRGY 298
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D ++ + + +Q+ D M+ G + PN + N+++ C +N +++
Sbjct: 299 APNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS--PNSVTCNSLIQGYCKSNQMEHA 356
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M+ G + T+ + L + F EM+ ++P ++
Sbjct: 357 EHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG 416
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + AIE+W +LE G ++N L+ GL G + + +EML R +++
Sbjct: 417 LCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLD 476
Query: 241 DVTMQKLKKAFYNESR 256
++ L A E +
Sbjct: 477 SISYNTLILACCKEGK 492
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 3/217 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
D AL F+ M N P + + L + + ++LW ++ GF N + N
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF--AANTVTSN 446
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
A++ LC + + +M+ G DS++YN + K KV E EM++
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
QP + L + + E A +W+ +NG P + +++ G R+ +
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+ +EM+ +I V L +A Y E+ +MR+ F
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRA-YCENGNMREAF 602
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P++ YN ++ LCN ++ + + +G FPD+ TY ++ + K +V E
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
E F EM+ + + + T I + A + + + GI A+ + L+ G
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626
Query: 216 LRNLGRLSDVRRFAEEM 232
L N+G + + +EM
Sbjct: 627 LSNIGLVDSANQLLDEM 643
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 99/279 (35%), Gaps = 39/279 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V E K EMV R P+ + Y L L +++EA K FP
Sbjct: 489 KEGKVEEGFKLKEEMVRR-GIQPD-MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPD 546
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +D K N +L+ MV + + N ++Y ++ C N ++ FR
Sbjct: 547 AYTYGIMIDGYCKANRVEEGEKLFQEMVTM--KIEQNAVVYGTLIRAYCENGNMREAFRL 604
Query: 124 -----------------------------------FDQMVFHGAFPDSLTYNMIFECLIK 148
D+M G P+ + Y + K
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++H+V++ EM N P + I + A ++ N + + GI+P +
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
N L G G++ + + + M I + D+T L
Sbjct: 725 YNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL 763
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
VF F + G FP T N + L+K +V F M P +T +
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI-- 237
+ AIE++ + + G+ P + N ++ GL GRL + +F E+M R+
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265
Query: 238 --LIYDVTMQKLKK 249
+ Y V + L K
Sbjct: 266 SLVTYGVLINGLVK 279
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ EA K EM+ER ++Y T ++ + +V+E K M
Sbjct: 451 GLCEAGSKEEAAKLLKEMLERGLVLDS--ISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + LW G P+ Y ++ C N V+
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN--FPDAYTYGIMIDGYCKANRVEEG 566
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +MV +++ Y + +N + E +M T ++ I
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + + A ++ + + + G+ P L+ G LG++ V +EM
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM 678
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 12/232 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G ++ AL+ M C T + N L
Sbjct: 206 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 265
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ I YN V LC N+ V + + D MV G PD
Sbjct: 266 RVEDALGYIQQE---IADGFE--PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN++ CL KN ++ E + ++M+ P T I L + E A+++
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ G+ P + N+L+ L +G R EEM N +VT L
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 17/272 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G+ +EG++ A + M+E A + + LI G +V++AL +++
Sbjct: 225 GFVEEGSIEAALRVKARMLEM------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P ++ ++ L + + H +++ D+MV G + P++ YN VV LC N
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD--PDVFTYNIVVNCLCKNGQ 336
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +QMV G PD T+N + L ++ E + ++ P
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
I L +P A+ ++ + +G P E + N L+ L +LG+L ++M
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 233 LNRRILIYDVTMQKL-KKAFYNESRSMRDRFD 263
R + Y+ + L KK E+ + D+ D
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ A + F EM + P+ V Y T + L ++ +AL L+ M+ C +
Sbjct: 403 KVGDPHLALRLFEEM-KNSGCTPDEV-TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D L K +++D M G + N I +N ++ LC + +D+ F
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR--NAITFNTLIDGLCKDKKIDDAFGL 518
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+QM+ G P+++TYN I K + + + M N ++ + T I L
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A+++ + G+ P + N +L L + D EM
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +V A K MV+ E + V Y + L + Q++EA L M C
Sbjct: 295 GLCQNDHVGHALKVMDVMVQ--EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + L N + L + G + P++ +N ++ LC D
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN + + L K+ + + +M + + T I
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+++ + GI + N L+ GL ++ D +M++ +
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPN 530
Query: 241 DVT 243
++T
Sbjct: 531 NIT 533
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 79 DSTHTVQLWDIMVGIG-------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
DS QL+D V + F + + ++YN ++ +L + + + + +M G
Sbjct: 117 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 176
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
PD +T+N + + L + +V EM P T + ++ E A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ +LE G + + NVL+ G LGR+ D + ++
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 3/211 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T + L + +++EA + M + F+ +D L K
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + M+ G L PN I YN+++ C D+ + M +G D +TY +
Sbjct: 518 LINQMISEG--LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLING 575
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + M +PTP + L + A+ ++ + E G P
Sbjct: 576 LCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPD 635
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLNR 235
+ ++ GL R G + + F EM+++
Sbjct: 636 ALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 4/256 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ N EA + FGEM+ R P+ ++++ + + R + +D+AL + R MK P
Sbjct: 83 RRDNFSEAKEIFGEML-RQGVVPD-LVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPD 140
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + + +++ D M+ G L ++I YN ++ LC + + +
Sbjct: 141 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL--DVIAYNTILNGLCKEKMLTDADKL 198
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV GA PD T+ + ++ + + + F M + +P + T I
Sbjct: 199 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 258
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E E A E+W+ ++ I P + +L+ ++G +S+ R + M+ + I VT
Sbjct: 259 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 318
Query: 244 MQKLKKAFYNESRSMR 259
+ K + S +
Sbjct: 319 CNTVIKGYCRSGDSSK 334
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN++EA K EM+E + V+AY T L L + K + +A K M
Sbjct: 150 GYCRNGNMLEALKIRDEMLE--QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + + + T + L+ M N+ P+++ YN ++ C +++
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ--RNIKPDIVAYNTLIDGFCKVGEMEKA 265
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D M+ FP+ +TY ++ V E + MI+ +PT + C T I
Sbjct: 266 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 325
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ + A E ++ G+ P S N L+
Sbjct: 326 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 6/212 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y T + R ++EA + + M + P+L ++ ++ L K +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ IG L P+ YN ++ C ++ F +M+ G PD ++++ + +
Sbjct: 61 EMLNIG--LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSR 118
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF--AIEIWNYILENGILPLE 206
N+ + + +F +M K + P N + M A++I + +LE G +
Sbjct: 119 NRHLDQALVYFRDMKK--FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 176
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ N +L GL L+D + +EM+ R L
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGAL 208
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V++A + +M+E +P+ + Y + L + + +A L + C
Sbjct: 400 GLSKQGLVLQALQLMKDMMEH-GCSPD-IWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D K + +++ D M+ G + P++I YN ++ LC +DNV
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG--ITPDVITYNTLLNGLCKARKLDNV 515
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G P+ +TYN++ E K++KV E F EM P + T I
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 181 LLDADEPEFAIEIW 194
L E + A E++
Sbjct: 576 LCSNGELDKAYELF 589
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EA M + P + F+ + +L K + + +L+ ++ G + PNL +N
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG--VCPNLFTFNI 256
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+ LC +D R + +V G PD ++YN + K+ K+ E E + H+M+ +
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+P T I A + A +I + G +P E + + L+ GL N G ++
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376
Query: 227 R-FAEEM---LNRRILIYDVTMQKLKK 249
F E M I++Y+ ++ L K
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSK 403
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 10/265 (3%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ ++G V EA F E ++ ++ P V +Y + L+ +A K MK +
Sbjct: 86 YGRKGKVQEAVNVF-ERMDFYDCEPS-VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIY 143
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + + T ++L + M G G N + Y AV+ N +
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF--NAVSYCAVISGFYKENCQIEAY 201
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G PD LT+N + L K V E E F +++K P I L
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI---- 237
+ A + I+ G+ P S N L+ G +L + + +M+N +
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 238 LIYDVTMQKLKKA--FYNESRSMRD 260
Y+ + KA N + +RD
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRD 346
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 8/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +VEA +MV E Y T + + + A K LR +
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNE--FTYNTIINGFCKAGMMQNADKILRDAMFKGF 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ ++ L D + ++ + GF ++I+YN +V L V
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK--HSIILYNTLVKGLSKQGLVLQA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ HG PD TYN++ L K + + ++ I P T I
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
+ AIEI + +L +GI P + N LL GL +L +V + ML +
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 237 ILIYDVTMQKLKK 249
I+ Y++ ++ K
Sbjct: 531 IITYNILIESFCK 543
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGEN 59
G+ KE +EA F EM+++ P+ +L + + L + V E+ K F +VMK
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQ-GICPD-ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P L F+ + L + +L + +V G L P++I YN ++ C ++ +
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG--LTPDVISYNTLICGFCKHSKLVE 304
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +MV G P+ TYN I K + + + + + P ++ I
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + + A+ ++ +E G N L+ GL G + + ++M+
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 40/245 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ N+ +A + M+ P+ V+ Y T L L + +++D + + M + C
Sbjct: 470 GYCKQRNMDKAIEILDTMLSH-GITPD-VITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ K + ++L+ M G L P+++ ++ LC+N ++D
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRG--LTPDIVTLCTLICGLCSNGELDKA 585
Query: 121 F------------------------------------RFFDQMVFHGAFPDSLTYNMIFE 144
+ + F +M PD+ TY ++ +
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K + F E I P+ C + L A+ I N +++NGI+P
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Query: 205 LEASA 209
E ++
Sbjct: 706 EEVNS 710
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 4/193 (2%)
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+QL M+ G + P++ YN VV LC + + + + G PD T+N
Sbjct: 409 QALQLMKDMMEHGCS--PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + K + + + M+ + P + T + L A + + ++ + +LE G
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN--ESRSMR 259
P + N+L+ ++S+ +EM R + VT+ L + E
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAY 586
Query: 260 DRFDSLERRWKTS 272
+ F ++E+ +K S
Sbjct: 587 ELFVTIEKEYKFS 599
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 4/230 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG + EA K F + + E Y + L + EAL L+ M+ NC P
Sbjct: 292 REGLLDEARKFFARL--KSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPD 349
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ + V+ D M+ G +MPN I Y V+ D F
Sbjct: 350 LVTYNELVAAYVRAGFHEEGADFIDTMIRKG--IMPNAITYTTVINAYGKAGKEDKALSF 407
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM G P+ TYN I L K ++ E+ + +M N P + T + M +
Sbjct: 408 FRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN 467
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ ++ + G P + N L+ G DV + EEM+
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMI 517
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 15/230 (6%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V A+ T L R + + A+ M+ PTL ++ LD+ K+ S W+
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS------WN 262
Query: 89 IMVGIGFNLMPNLIMYN-----AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++G+ + N + ++ V+ +D +FF ++ G + TYN +
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ K E + EM KN P + + + A E + + ++ GI+
Sbjct: 323 QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIM 382
Query: 204 PLEASANVLLVGLRNLGR----LSDVRRFAEEMLNRRILIYDVTMQKLKK 249
P + ++ G+ LS R+ E + Y+ + L K
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGK 432
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 33/175 (18%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL------------- 74
+ + Y T + + + D+AL F R MK C P + ++ L +L
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML 443
Query: 75 --VKLNDSTHTVQLWDIMVGIGFN------------------LMPNLIMYNAVVGLLCNN 114
++ N W+ M+ + N PN +NA++G
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+V + +++M+ G P TYN + L + E+ +M ++P
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 55/136 (40%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L+++N+++ + N D + G PD +TYN + + + + + E
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ K+ +P ++ T I + AI + + +GI P + N + G
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 219 LGRLSDVRRFAEEMLN 234
G S+V M+
Sbjct: 748 KGMFSEVEEVISYMIQ 763
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 4/228 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + A F EM R V+++ T + + R +D A R M P +
Sbjct: 130 GELASAQNVFDEMQSRGVR--RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVY 187
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + L ++ +++ M G G PN +++ ++ C D + +
Sbjct: 188 TYGALIQGLCRVGRIEDARGVFEKMCGRGMK--PNAVVFTILIDAHCKKGDAETMLELHR 245
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G PD++TYN I L + + + EM +P + T I +
Sbjct: 246 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEE 305
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
E + A+EI ++ G+ E + L+ GL GR +D R EM+
Sbjct: 306 ELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 10/197 (5%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P K F+ + LV+L + ++D M G ++ +N ++ +C D+D
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRR--TVVSFNTMISGMCRAGDLDGAE 171
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+M G PD TY + + L + ++ + F +M +P A T+L
Sbjct: 172 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN----AVVFTIL 227
Query: 182 LDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+DA + E +E+ + E G+ P + N ++ GL L EM + +
Sbjct: 228 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 287
Query: 238 LIYDVTMQKLKKAFYNE 254
VT L + E
Sbjct: 288 RPDTVTYTTLIDGYCKE 304
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 94/254 (37%), Gaps = 45/254 (17%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L R ++++A M G P F+ +D K D+ ++L
Sbjct: 186 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 245
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY--------- 139
M G P+ + YNA+V LC D+ + +M G PD++TY
Sbjct: 246 EMRERGVR--PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 303
Query: 140 ------------NMIFEC--------------LIKNKKVHEVENFFHEMIKNEWQPTPLN 173
NM+ E L K + + E EM++ +P
Sbjct: 304 EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD--- 360
Query: 174 CATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T TM++DA + + + + + G P + NV++ G LG++ +
Sbjct: 361 -NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 419
Query: 230 EEMLNRRILIYDVT 243
M+N + D+T
Sbjct: 420 NAMINIGVSPDDIT 433
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G L P + GL+ F+ Q++ G P++ +N++ L++ ++
Sbjct: 79 GIRLEPT-----SCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELA 133
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+N F EM + T ++ T I+ + A + + A + + E G+ P + L+
Sbjct: 134 SAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALI 193
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
GL +GR+ D R E+M R
Sbjct: 194 QGLCRVGRIEDARGVFEKMCGR 215
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +A + GEM+E P++ Y + R V L+ L+ M+ +
Sbjct: 335 GLSKAGRSADAERVLGEMME-AGLEPDNT-TYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ KL + L + M+ IG + P+ I YN ++ C + V ++
Sbjct: 393 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS--PDDITYNILLDGHCKHGKVTDI 450
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G PD Y I ++K K
Sbjct: 451 EELKSA---KGTVPDLGVYTSIVGEIVKKK 477
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + L + + +A + L M P ++ +D + D ++L
Sbjct: 327 VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKE 386
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G P ++ YN ++ C + N + M+ G PD +TYN++ + K+
Sbjct: 387 MQNKGRK--PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 444
Query: 150 KKVHEVENF 158
KV ++E
Sbjct: 445 GKVTDIEEL 453
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH--VLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G+ K G A+ +++ER + H V+ + + + + ++D+A + L +MK
Sbjct: 252 GYCKTGCTGLAH----QLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P L ++ + L + +L M G G ++P++I YN+++G+ C N ++
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG--ILPDIITYNSLIGIFCRNFQIE 365
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F+ + MV G PD ++Y + L+K+++ E M P + +
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLM 425
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L + + A + + G P ++ VL+ GL GR+ D + M++ I
Sbjct: 426 EGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGI 484
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 6/199 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
GN+ A + F E VE P+ VL + + L + Q+ EA + + M P +
Sbjct: 154 GNLSRAMQYFRESVE---CAPDSVL-FNILVHGLCKANQLSEARQMIEEMSERGIVPDVV 209
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+++ +D L K QL + MV + PNL+ YN ++ C + +
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVK--RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIE 267
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ G PD +T+N + + K+ + H M K P + I+ L DA
Sbjct: 268 RMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAG 327
Query: 186 EPEFAIEIWNYILENGILP 204
A E+ + + GILP
Sbjct: 328 RANEACELLSEMDGRGILP 346
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A + EM ER + V+ + + + L + A+++ R + C
Sbjct: 114 GFCKAGDMERAFQLLAEMKER--GHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVEC 169
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + L K N + Q+ + M G ++P+++ YN+++ LC + ++
Sbjct: 170 APDSVLFNILVHGLCKANQLSEARQMIEEMSERG--IVPDVVTYNSLIDGLCKSYRMEEA 227
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV P+ +TYN + K MI++ P + + I+
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISG 287
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A E+ + + + P + NVL+ GL + GR ++ EM R IL
Sbjct: 288 FCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPD 347
Query: 241 DVTMQKLKKAF 251
+T L F
Sbjct: 348 IITYNSLIGIF 358
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+G + N I YN ++G C D++ F+ +M G PD +T++ I + L +
Sbjct: 97 LGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL 156
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+F E + E P + + L A++ A ++ + E GI+P + N L
Sbjct: 157 SRAMQYFRESV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSL 214
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRI 237
+ GL R+ + R+ E M+ R++
Sbjct: 215 IDGLCKSYRMEEARQLLETMVKRKV 239
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 10/274 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVL---AYETFLITLIRGKQVDEALKFLRVMKGENC 60
K G+ EA+ F M WN A+ + L L ++ EA+ L +M +
Sbjct: 312 KSGHASEAHNVFCRM-----WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGI 366
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L KL + L+D M G ++P++ YN ++ VD
Sbjct: 367 VTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG--IIPDVFTYNIMISSYGRVGLVDKA 424
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M PD +TYN + CL K+ + E F EM + + P + I
Sbjct: 425 SELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIEC 484
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+++ E A +++ ++ G P + N+LL L G+ + + E M + ++
Sbjct: 485 FGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPD 544
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
+T L++ R++R R + W S +
Sbjct: 545 SITYSILERLESRSQRTVRIRKPTRISGWVVSPL 578
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + VD+A + MK ++C P ++ + + K ++ + +D
Sbjct: 163 IFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFD 222
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI +N ++ L N VD V +MV + P+ TY++ + L
Sbjct: 223 EMVSKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILAT 280
Query: 149 NKKVHEV 155
++H +
Sbjct: 281 EGQLHRL 287
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y+ + +R ++V + + M+ + + ++ LD L K Q+++ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ +P+ Y ++ + FFD+MV G + + +N I E L KNK
Sbjct: 190 KQK--HCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNK 247
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITML 181
V +V +M++N+ QP + + +L
Sbjct: 248 MVDKVIFVLSKMVENDCQPNQFTYSITLDIL 278
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+++ I+ +++ EA F++ M+ P ++N + L DS + L+ M +G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + N+ ++ ++ + VD D+M + PD + YN+ +C K KV
Sbjct: 231 YAV--NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDM 288
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FFHEM N + + I +L AD A+E++ ++ +N +P + N +++
Sbjct: 289 AWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIM 348
Query: 215 GLRNLGRLSDVRRFAE 230
G G+ D E
Sbjct: 349 GYGMAGKFEDAYSLLE 364
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y L L R QVDEALK MK ++ P L ++ +D+L K + + D
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PN+I N +V LC +D+ F+ + PD++TY + E L +
Sbjct: 434 AMKDAG--LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP---- 204
+ +V E + +M+ P + + I E +I+N +L G P
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551
Query: 205 --------LEAS----ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+A L ++NLG + D R + ILI+ + Y
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT-------ILIHGLVKAGFAHEAY 604
Query: 253 NESRSMRDRFDSLERR 268
+M+++ L+ R
Sbjct: 605 ELFYTMKEQGCVLDTR 620
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM + + + V+ Y + + L + ++DEA K +
Sbjct: 628 GFCKSGKVNKAYQLLEEM--KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + ++ G L PN+ +N ++ L ++
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG--LTPNVYTWNCLLDALVKAEEISEA 743
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P+ +TY+++ L K +K ++ F+ EM K ++P T I+
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A A ++ E G + A N ++ GL N R SD R EE + IY
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 241 DVT 243
T
Sbjct: 864 TKT 866
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +A++ E VE FE ++ AY T ++ + ++A L + + C
Sbjct: 313 GVLCKADR-LNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L L + ++ ++ M + +PNL YN ++ +LC ++
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKK---DAIPNLSTYNIMIDMLCKAGKLETA 428
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M G FP+ +T N++ + L K +++ + + F + +P + + I
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A +++ +L+ +P L+ GR D + EML
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 5/224 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ +EG V A EM P+ VL Y + + +VD A KF MK
Sbjct: 245 FAREGRVDAALSLLDEMKSN-SLEPDVVL-YNVCIDCFGKAGKVDMAWKFFHEMKANGLV 302
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
+++ + +L K + V+L++ M +P YN ++ ++ +
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHM--DQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
++ G P ++YN I CL + +V E F EM K + P I ML
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDML 419
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A + E A+ + + + + G+ P + N+++ L RL D
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + +++D+A + + C P + + ++ L + +L++ M + N +
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM--LDANQI 511
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN ++Y +++ ++ + +++M+ G PD L N +C+ K ++ +
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F E+ + P + I L+ A A E++ + E G + + N ++ G
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 219 LGRLSDVRRFAEEM 232
G+++ + EEM
Sbjct: 632 SGKVNKAYQLLEEM 645
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +K + EM+ R +P+ +L T++ + + ++++ + +K P
Sbjct: 526 KCGRKEDGHKIYNEML-RLGCSPD-LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + LVK + +L+ M G L + YN V+ C + V+ ++
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
++M G P +TY + + L K ++ E F E
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG+V A + F E + P+ ++ Y + + L + AL+ + M E C
Sbjct: 334 GLCAEGDVERALELFNEAQAK-GIKPD-IVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391
Query: 61 FPTLKFFSNALDILVKL-NDSTHTVQLWD-IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ ++ ++ L K+ N S TV + D IM G +P++ +N ++ C +D
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG----YLPDVFTFNTLIDGYCKRLKLD 447
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M +G PD++TYN + L K KV+EV F EMI P P+ I
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+++ E A ++ + + G+ P S N L+ G G L
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 112/295 (37%), Gaps = 65/295 (22%)
Query: 4 KEGNVVEANKTFGEMVER------FEWN------------PE--------------HVLA 31
K G+V+EA G++++R F +N PE V+
Sbjct: 198 KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVT 257
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L + EA+ +LR M + C P ++ +D K++ +L V
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 317
Query: 92 GIGF---------------------------------NLMPNLIMYNAVVGLLCNNNDVD 118
GF + P++++YN++V LC +
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M G PD TYN++ L K + + ++ I + P T I
Sbjct: 378 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A+++ + E GI P + N +L GL G++++V +EM+
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 36/257 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+AY T + L +A + M + FP L F+ L L K D L
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210
Query: 89 --IMVGIGFNL------------------------------MPNLIMYNAVVGLLCNNND 116
I G+ NL +P+++ YN ++ LC +
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSM 270
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ +M+ G PD TYN I + K V E + + + P + +
Sbjct: 271 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 330
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG----RLSDVRRFAEEM 232
I L + E A+E++N GI P N L+ GL G L + AEE
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 233 LNRRILIYDVTMQKLKK 249
+ I Y++ + L K
Sbjct: 391 CHPDIQTYNIVINGLCK 407
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V E N+TF EM+ + NP + Y + R +++EA K + M E
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPNP---ITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P F+ + + D L+ + G++ + +N ++G ++
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD--TFNTLIGAFSGKLNMHM 588
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ FD+M+ G DS TY ++ + K V EMIK + P+ I
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
L A+ I + +++ G++P
Sbjct: 649 SLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ +A + + + + P+ V + T + + ++D AL+ + M
Sbjct: 404 GLCKMGNISDATVVMNDAIMK-GYLPD-VFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L+ L K + + M+ G + PN I YN ++ C +N ++
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH--PNPITYNILIENFCRSNKMEEA 519
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ +M G PD++++N + +N + F ++ + + T
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 4/230 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG + EA K F + + E Y + L + EAL L+ M+ NC P
Sbjct: 292 REGLLDEARKFFARL--KSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPD 349
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ + V+ D M+ G +MPN I Y V+ D F
Sbjct: 350 LVTYNELVAAYVRAGFHEEGADFIDTMIRKG--IMPNAITYTTVINAYGKAGKEDKALSF 407
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM G P+ TYN I L K ++ E+ + +M N P + T + M +
Sbjct: 408 FRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN 467
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ ++ + G P + N L+ G DV + EEM+
Sbjct: 468 KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMI 517
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 15/230 (6%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V A+ T L R + + A+ M+ PTL ++ LD+ K+ S W+
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS------WN 262
Query: 89 IMVGIGFNLMPNLIMYN-----AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++G+ + N + ++ V+ +D +FF ++ G + TYN +
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ K E + EM KN P + + + A E + + ++ GI+
Sbjct: 323 QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIM 382
Query: 204 PLEASANVLLVGLRNLGR----LSDVRRFAEEMLNRRILIYDVTMQKLKK 249
P + ++ G+ LS R+ E + Y+ + L K
Sbjct: 383 PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGK 432
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 33/175 (18%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL------------- 74
+ + Y T + + + D+AL F R MK C P + ++ L +L
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDML 443
Query: 75 --VKLNDSTHTVQLWDIMVGIGFN------------------LMPNLIMYNAVVGLLCNN 114
++ N W+ M+ + N PN +NA++G
Sbjct: 444 CDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+V + +++M+ G P TYN + L + E+ +M ++P
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKP 558
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 55/136 (40%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L+++N+++ + N D + G PD +TYN + + + + + E
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ K+ +P ++ T I + AI + + +GI P + N + G
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 219 LGRLSDVRRFAEEMLN 234
G S+V M+
Sbjct: 748 KGMFSEVEEVISYMIQ 763
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + +A+ EMV R P V+ Y T + ++ K+V A + +M + CF
Sbjct: 534 FSKAGIIKQAHNWLDEMV-RDGCEPT-VVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVG------------IGFNLM--PNLIMYNAV 107
P + ++ +D K + Q++ M G I N+ PN++ Y A+
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
V LC + V + + M G P+++ Y+ + + K K+ E + FH+M++ +
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
P ++ I L + +++ + +LEN P
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI----- 73
+E+ E P +V+ Y + ++ G ++ + F K N + N +++
Sbjct: 404 MEKCECKPGYVV-YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFAR 462
Query: 74 -LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
L ++ M+G GF +P+ Y+ V+G LCN + V+N F F +M G
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGF--VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGV 520
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD TY ++ +C K + + N+ EM+++ +PT + T I L A + A E
Sbjct: 521 VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANE 580
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ ++ G P + L+ G G + + M
Sbjct: 581 LFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F +MVER +NP +V Y + + L + K++D LK L M +C
Sbjct: 689 GFCKAAKLDEAQEVFHKMVER-GYNP-NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC 746
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G PN++ Y A++ VD
Sbjct: 747 APNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK--PNVVTYTAMIDGFGKAGKVDKC 804
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TY ++ + E EM + W ++
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH----VSSYCK 860
Query: 181 LLDADEPEF--AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+++ + EF ++ + + +NG P VL+ GRL +E+++
Sbjct: 861 VIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 8/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y L + KQ+ + L +M E C+P+ F++ + K +D ++ +L
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF------FDQMVFHGAFPDSLTYNM 141
M P ++YN ++G +C+ ++ F +++M+ G + +
Sbjct: 402 KKMEKC--ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + HEM+ N + P + I L +A E A ++ + G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++P + +L+ G + + +EM+ VT L A+
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 97/241 (40%), Gaps = 22/241 (9%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + + +A +L M + C PT+ ++ + +K + +L++
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD------------- 135
+M+ G PN+I Y A++ C + +++ + + +M PD
Sbjct: 584 LMIAKG--CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641
Query: 136 ---SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
+TY + + L K KV + + M + +P + I A + + A E
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLK 248
+++ ++E G P + + L+ L RL V + +ML I+IY + L
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Query: 249 K 249
K
Sbjct: 762 K 762
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 85/240 (35%), Gaps = 28/240 (11%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+F L + ++A K + M G P +S + L + + L+ M G
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G ++P++ Y ++ + + D+MV G P +TY + +K KKV
Sbjct: 519 G--VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576
Query: 154 EVENFFHEMIKNEWQPTPLN-----------------CATAITMLLDADEPEFAI--EIW 194
F MI P + C M DAD P+ + +I
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML----NRRILIYDVTMQKLKKA 250
N + E P + L+ GL ++ D R E M ++YD + KA
Sbjct: 637 NNVAEK---PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG++ AN+ M + P +V+ Y T L L ++ EA + L M ++C
Sbjct: 295 GICKEGHLEVANEILNRM-PSYGLKP-NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G MP++I Y V+ C +D
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLIDEA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + + E +MI+ P P+ T I
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 241 DVTMQKLKKAFYNESR 256
+ + A E R
Sbjct: 531 TIIYSSIACALSREGR 546
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V+A + +M++ + P + + + T + L + V++A++ L+ M C
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ--QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S +D L K + ++L ++MV G + PN I+Y+++ L V+ V
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS--PNTIIYSSIACALSREGRVNKV 550
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ FD + D++ YN + L K + +FF M+ N P
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VD ++ L M C P + ++ ++ K V L M G PN + Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK--PNTVSY 429
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
V+ LC+ + QM+ G P+ +T+N + L K V + +M+
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P ++ +T I L A + E A+E+ N ++ GI P + + L GR++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
V + + I D T++ YN S SL +RW+T +
Sbjct: 550 VIQMFDN-------IKDTTIRS-DAVLYNAVIS------SLCKRWETDR 584
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDEA+ LR + C + ++ L L +L D MV + + PN++ +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV--DCAPNIVTF 254
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++G LC N + V QM HG PD Y I + + K + + M
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P + T + L A+ + A E+ + + + + + N+L+ G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
V E+ML+ + +T + F E
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RG+ D AL+ L M + C P + L+ + ++V++ + M G L +
Sbjct: 124 RGRIAD-ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL--D 180
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
N V+ +C VD ++ F G D ++YN + + L K+ +VE
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM++ + P + T I L E E+ + E+G P ++ G+ G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 221 RLSDVRRFAEEMLNR--------RILIYDVTMQKLKKA 250
L A E+LNR ++ Y+ ++ L A
Sbjct: 301 HL----EVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+A+ L L K+ +A+ LR M C P + ++ L L N S ++L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G + P+++ Y V+ D+D + + +M+ G P+ +TY+ I L
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + + M+KN P NC T +++ + +P+ AI + +G+ P
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMP---NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ L GR ++ R+ + M R
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V++Y T + + +D+A M P + +S+ + L K ++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ MV G +MPN YN++V C++ F +M G PD +TYN + +
Sbjct: 256 VLTSMVKNG--VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENG 201
L KN + E F M K +P T LL + A+ + + ++ NG
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 202 ILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
I P ++L+ G++ + ++ LN + Y + L K+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + +VD+A+ M+ +
Sbjct: 348 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K ++ ++ M I L P I+YN+++ LC + D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G D++ +N I + K +V E E F M++ +P + +T I
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRR 236
A + + A ++ ++ G+ P + N L+ G + R+ D R ++
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 584 IITYNIILQGL 594
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A + F +M++ +P +++ Y + + +L + D+A + L ++ C
Sbjct: 421 KSGRVEDAMRYFEQMIDE-RLSPGNIV-YNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I Y+ ++ C +D +
Sbjct: 479 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEATK 535
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TYN + K ++ + F EM + P + + L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I E+G ++ N++L GL
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++++AL R M+
Sbjct: 523 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC NN D
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEA 638
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ L+K + E ++ F + N P
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG V EA+ M+ R E N V+ Y + +VD A+K M ++C
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPN---VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ ++ K+ + L++ M L PN + YN ++ LC+ + +
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSR--QELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +MV G PD +TY + + L KN+ + + + + W P T + +
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A E E A ++++ + G+ P + N+++ GL G L++ + EM D
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 243 TMQKLKKAFYNESRSMR 259
T + + F + ++R
Sbjct: 527 TYNLITRGFLRNNEALR 543
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 49/275 (17%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ N V+ Y T + L + A++ LR M+ N
Sbjct: 149 GLCVEGKIGEALHLFDKMIGEGFQPN---VVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + FS +D L K T ++ M+ G + PN++ YN+++ LC + +
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGIS--PNIVTYNSLIHGLCKLCEWKH 263
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V ++MV PD T N + + L K V E + MI +P
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN----VVTYN 319
Query: 180 MLLDA----DEPEFAIEIWNYILE--------------NG-------------------- 201
L+D +E + A+++++ ++ NG
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 202 -ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ P + N L+ GL ++GRL D EM+ R
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 414
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 34 TFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
T TLIRG ++ EAL M GE P + + ++ L K+ +++ ++L
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M N PN+++++ ++ LC + V F F +M+ G P+ +TYN + L K
Sbjct: 201 MEQ--GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ V +EM+ ++ P T + L A ++ + ++ G+ P +
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318
Query: 210 NVLLVG--LRN 218
N L+ G LRN
Sbjct: 319 NALMDGHCLRN 329
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV R + P+ ++ Y T L + + +D+A+ L+ ++G N
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQI-PD-LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ LD + + + L+ + G L PN+ YN ++ LC +
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG--LQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+ F +M +G P+ TYN+I ++N + EM+
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ L+D M+G GF PN++ Y ++ LC + R M P+ + ++ +
Sbjct: 160 LHLFDKMIGEGFQ--PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L K+++V E N F EMI P + + I L E + + N ++++ I+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P + N ++ L G +++ + M++R +
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 7/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A F EM R E P V Y T + L ++ +A+ M
Sbjct: 359 GYCKIQSVDKAMYLFEEM-SRQELTPNTV-TYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + D L K + H + ++ I G N P++ +Y ++ +C ++++
Sbjct: 417 IPDLVTYRTLSDYLCK---NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TYN++ L K + E F EM KN P
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L +E IE+ +L G ++ S LLVG+
Sbjct: 534 GFLRNNEALRTIELLEEMLARG-FSVDVSTTTLLVGM 569
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA TF M+ + P + + L ++ + K L R M P + +
Sbjct: 53 EALSTFNRMLHK--QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ L LN ++ +G P+ + ++ LC + FD+M+
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P+ +TY + L K M + QP + +T I L +
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A I++ ++ GI P + N L+ GL L V EM++ +I+ T+ +
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 250 AFYNES 255
A E
Sbjct: 289 ALCKEG 294
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG++ AN+ M + P +V+ Y T L L ++ EA + L M ++C
Sbjct: 295 GICKEGHLEVANEILNRM-PSYGLKP-NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G MP++I Y V+ C +D
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLIDEA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + + E +MI+ P P+ T I
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 241 DVTMQKLKKAFYNESR 256
+ + A E R
Sbjct: 531 TIIYSSIACALSREGR 546
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V+A + +M++ + P + + + T + L + V++A++ L+ M C
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ--QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S +D L K + ++L ++MV G + PN I+Y+++ L V+ V
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS--PNTIIYSSIACALSREGRVNKV 550
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ FD + D++ YN + L K + +FF M+ N P
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VD ++ L M C P + ++ ++ K V L M G PN + Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK--PNTVSY 429
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
V+ LC+ + QM+ G P+ +T+N + L K V + +M+
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P ++ +T I L A + E A+E+ N ++ GI P + + L GR++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
V + + I D T++ YN S SL +RW+T +
Sbjct: 550 VIQMFDN-------IKDTTIRS-DAVLYNAVIS------SLCKRWETDR 584
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDEA+ LR + C + ++ L L +L D MV + + PN++ +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV--DCAPNIVTF 254
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++G LC N + V QM HG PD Y I + + K + + M
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P + T + L A+ + A E+ + + + + + N+L+ G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
V E+ML+ + +T + F E
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RG+ D AL+ L M + C P + L+ + ++V++ + M G L +
Sbjct: 124 RGRIAD-ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL--D 180
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
N V+ +C VD ++ F G D ++YN + + L K+ +VE
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM++ + P + T I L E E+ + E+G P ++ G+ G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 221 RLSDVRRFAEEMLNR--------RILIYDVTMQKLKKA 250
L A E+LNR ++ Y+ ++ L A
Sbjct: 301 HL----EVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A + EM F+ Y L R +++ L M + C
Sbjct: 120 GLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC 177
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ L+ + + V L + G +++ YNAV+ LC +V
Sbjct: 178 TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE--ADIVSYNAVLKGLCMAKRWGDV 235
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+MV P+ +T+N + L +N V +M ++ P AT I
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A EI N + G+ P N +L GL + R + EM + +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 241 DVT 243
DVT
Sbjct: 356 DVT 358
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWN-PE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ G V+EA++ F +M E P +V+ + L + + +A + MK F
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
+L+ ++ L L++ + + D MV G PN YN ++ LC N+ + +
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIE--PNAYTYNIMMDGLCRNHMLSDAR 383
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ +G +PD++ Y+ + KV E ++ HEMI+N QP C T + L
Sbjct: 384 GLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSL 443
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A E+ + E P + N+++ GL G L EM
Sbjct: 444 WKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 40/256 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F EM+ + P+ V Y+TF+ + + ++ A + L+ M+ C
Sbjct: 534 GLCKVGRLEEAKKKFIEMLAK-NLRPDSV-TYDTFIWSFCKQGKISSAFRVLKDMERNGC 591
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
TL+ YNA++ L +NN + +
Sbjct: 592 SKTLQ-------------------------------------TYNALILGLGSNNQIFEI 614
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M G PD TYN I CL + K + + HEM+ P + I
Sbjct: 615 YGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKA 674
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + A E++ L N EA +++ L G+LS+ + E L+R + +
Sbjct: 675 FSKSSDFKVACELFEVAL-NICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLK 733
Query: 241 DVTMQKLKKAFYNESR 256
+ + L + R
Sbjct: 734 NFMYKDLIARLCQDER 749
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y +L+ L+R ++ EA L M + P ++ +D L + + + L D+M
Sbjct: 330 CYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLM 389
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ G + P+ + Y+ ++ C+ V +M+ +G P++ T N + L K
Sbjct: 390 MRNG--VYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEG 447
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG--------- 201
+ E E +M + +QP + C + L E + A EI + + NG
Sbjct: 448 RTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNS 507
Query: 202 -------------ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
LP + L+ GL +GRL + ++ EML + + VT
Sbjct: 508 FASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVT 562
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 26/232 (11%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-------- 55
KEG +EA + +M E+ + P+ V + L R ++D+A + + M
Sbjct: 445 KEGRTLEAEEMLQKMNEKC-YQPDTVTC-NIVVNGLCRNGELDKASEIVSEMWTNGPTSL 502
Query: 56 -KG-------------ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
KG NC P ++ ++ L K+ + + M + NL P+
Sbjct: 503 DKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEM--LAKNLRPDS 560
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ Y+ + C + + FR M +G TYN + L N ++ E+ E
Sbjct: 561 VTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDE 620
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
M + P IT L + + + AI + + +L+ GI P +S +L+
Sbjct: 621 MKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILI 672
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 82/231 (35%), Gaps = 24/231 (10%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+AY T L +V EA L M C P + L L K + ++
Sbjct: 398 TVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQ 457
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG----------------- 131
M + P+ + N VV LC N ++D +M +G
Sbjct: 458 KMNEKCYQ--PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSI 515
Query: 132 -----AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
PD +TY + L K ++ E + F EM+ +P + T I +
Sbjct: 516 HNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGK 575
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A + + NG + N L++GL + ++ ++ +EM + I
Sbjct: 576 ISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGI 626
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/231 (17%), Positives = 91/231 (39%), Gaps = 2/231 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW-D 88
+ Y T + R + +EA + + M P + F++ + L + +++ D
Sbjct: 220 VVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRD 279
Query: 89 IMVGIGFNL-MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + L PN++ +N ++ C + + + + M G F YN+ L+
Sbjct: 280 MQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLL 339
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+N ++ E EM+ +P + L A + + ++ NG+ P
Sbjct: 340 RNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTV 399
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
+ + LL G + G++ + + EM+ T L + + E R++
Sbjct: 400 AYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK-LNDSTHTVQLWDIMVGIGFN 96
+L + D AL+ M + C P +F L ILV+ L + Q +++
Sbjct: 159 SLCESRAFDHALQLFEKMPQKGCCPN-EF---TLGILVRGLCRAGLVKQALELVNNNNSC 214
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ N ++YN +V C + R ++M G PD +T+N L + KV E
Sbjct: 215 RIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEAS 274
Query: 157 NFFHEM 162
F +M
Sbjct: 275 RIFRDM 280
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V++A + +M+E +P+ + Y + L + + +A L + C
Sbjct: 400 GLSKQGLVLQALQLMKDMMEH-GCSPD-IWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D K + +++ D M+ G + P++I YN ++ LC +DNV
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG--ITPDVITYNTLLNGLCKARKLDNV 515
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G P+ +TYN++ E K++KV E F EM P + T I
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 181 LLDADEPEFAIEIW 194
L E + A E++
Sbjct: 576 LCSNGELDKAYELF 589
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EA M + P + F+ + +L K + + +L+ ++ G + PNL +N
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG--VCPNLFTFNI 256
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+ LC +D R + +V G PD ++YN + K+ K+ E E + H+M+ +
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+P T I A + A +I + G +P E + + L+ GL N G ++
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376
Query: 227 R-FAEEM---LNRRILIYDVTMQKLKK 249
F E M I++Y+ ++ L K
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSK 403
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 10/265 (3%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ ++G V EA F E ++ ++ P V +Y + L+ +A K MK +
Sbjct: 86 YGRKGKVQEAVNVF-ERMDFYDCEPS-VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIY 143
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + + T ++L + M G G N + Y AV+ N +
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF--NAVSYCAVISGFYKENCQIEAY 201
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G PD LT+N + L K V E E F +++K P I L
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI---- 237
+ A + I+ G+ P S N L+ G +L + + +M+N +
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 238 LIYDVTMQKLKKA--FYNESRSMRD 260
Y+ + KA N + +RD
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRD 346
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 8/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +VEA +MV E Y T + + + A K LR +
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNE--FTYNTIINGFCKAGMMQNADKILRDAMFKGF 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ ++ L D + ++ + GF ++I+YN +V L V
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK--HSIILYNTLVKGLSKQGLVLQA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ HG PD TYN++ L K + + ++ I P T I
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
+ AIEI + +L +GI P + N LL GL +L +V + ML +
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 237 ILIYDVTMQKLKK 249
I+ Y++ ++ K
Sbjct: 531 IITYNILIESFCK 543
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 117/303 (38%), Gaps = 59/303 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ N+ +A + M+ P+ V+ Y T L L + +++D + + M + C
Sbjct: 470 GYCKQRNMDKAIEILDTMLSH-GITPD-VITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ K + ++L+ M G L P+++ ++ LC+N ++D
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRG--LTPDIVTLCTLICGLCSNGELDKA 585
Query: 121 F------------------------------------RFFDQMVFHGAFPDSLTYNMIFE 144
+ + F +M PD+ TY ++ +
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K + F E I P+ C + L A+ I N +++NGI+P
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Query: 205 LEASA---------NVLLVGLRNLGRLSDVRRFAEEML-----NRRI-----LIYDVTMQ 245
E ++ + + L + S + ++ E+L NR++ L+Y V Q
Sbjct: 706 EEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGIRNRKVVEARPLLYKVAYQ 765
Query: 246 KLK 248
K K
Sbjct: 766 KAK 768
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALK-FLRVMKGEN 59
G+ KE +EA F EM+++ P+ +L + + L + V E+ K F +VMK
Sbjct: 190 GFYKENCQIEAYHLFDEMLKQ-GICPD-ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P L F+ + L + +L + +V G L P++I YN ++ C ++ +
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG--LTPDVISYNTLICGFCKHSKLVE 304
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +MV G P+ TYN I K + + + + + P ++ I
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + + A+ ++ +E G N L+ GL G + + ++M+
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YN VV LC + + + + G PD T+N + + K + + +
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + P + T + L A + + ++ + +LE G P + N+L+
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN--ESRSMRDRFDSLERRWKTS 272
++S+ +EM R + VT+ L + E + F ++E+ +K S
Sbjct: 544 DRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 11/225 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+A+ L L K+ +A+ LR M C P + ++ L L N S ++L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G + P+++ Y V+ D+D + + +M+ G P+ +TY+ I L
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + + M+KN P NC T +++ + +P+ AI + +G+ P
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMP---NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQ 245
+ N L+ L GR ++ R+ + M R I Y +Q
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P V++Y T + + +D+A M P + +S+ + L K ++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ MV G +MPN YN++V C++ F +M G PD +TYN + +
Sbjct: 256 VLTSMVKNG--VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILENG 201
L KN + E F M K +P T LL + A+ + + ++ NG
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 202 ILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
I P ++L+ G++ + ++ LN + Y + L K+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + +VD+A+ M+ +
Sbjct: 348 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K ++ ++ M I L P I+YN+++ LC + D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G D++ +N I + K +V E E F M++ +P + +T I
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRR 236
A + + A ++ ++ G+ P + N L+ G + R+ D R ++
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 584 IITYNIILQGL 594
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A + F +M++ +P +++ Y + + +L + D+A + L ++ C
Sbjct: 421 KSGRVEDAMRYFEQMIDE-RLSPGNIV-YNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I Y+ ++ C +D +
Sbjct: 479 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEATK 535
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TYN + K ++ + F EM + P + + L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I E+G ++ N++L GL
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++++AL R M+
Sbjct: 523 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC NN D
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEA 638
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ L+K + E ++ F + N P
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
R + PE A+ +++ R ++ +A+K L +M+ P L + A+ ILV N+
Sbjct: 276 RIQLCPE---AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNEL 332
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
++ + MV IG + PN++ YN ++ CN + VD DQM G PD ++Y
Sbjct: 333 KKALRFAERMVLIG--IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYY 390
Query: 141 MIFECLIKNKKVHEVENFFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
+ L ++K+++E+ +M ++ P + + I ML + A+EI
Sbjct: 391 TVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEI 444
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G +EA K M E W P + + Y + L R +++EA +R M G+
Sbjct: 536 GLCRNGKSLEARKMMN-MSEEEWWTP-NAITYSVVVHGLRREGKLNEACDVVREMIGKGF 593
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + + L + QL + G + N++ + V+ C +D++
Sbjct: 594 FPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAV--NVVNFTTVIHGFCQKDDLEAA 651
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D M PD++TY + + L K ++ E +M++ P+P+ + I
Sbjct: 652 LSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVI 709
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 15/216 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF------FSNALDILVKLND 79
P+HV Y + + L + DEAL+ L+ + L+F +S + K
Sbjct: 420 PDHV-TYNSLIQMLSKHGHGDEALEILQEAE------KLRFKVDKVEYSAIVHAYCKEGK 472
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+L M G + P+++ Y +V+ C +D + QM H P+++TY
Sbjct: 473 IQKAKELVSEMFSKGCD--PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTY 530
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
L +N K E + + W P + + + L + A ++ ++
Sbjct: 531 TTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIG 590
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
G P N+L+ L G+ + + +E +N+
Sbjct: 591 KGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNK 626
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/265 (17%), Positives = 96/265 (36%), Gaps = 37/265 (13%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
GN ++ F E + P +V+ Y + QVD+A++ + M + C P
Sbjct: 329 GNELKKALRFAERMVLIGIAP-NVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKV 387
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLL-------------- 111
+ + +L + +L M L+P+ + YN+++ +L
Sbjct: 388 SYYTVMGLLCRDKRLNEIRELIKKM-QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQ 446
Query: 112 ---------------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
C + +M G PD +TY + + +
Sbjct: 447 EAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIG 506
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ + + +M K+ +P + T + L + A ++ N E P + +
Sbjct: 507 KLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYS 566
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
V++ GLR G+L++ EM+ +
Sbjct: 567 VVVHGLRREGKLNEACDVVREMIGK 591
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G+V A K F M + + + Y L L+ + A+ +R M+ E P
Sbjct: 243 RAGDVNGAVKLFRFM--QLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPG 300
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L + +D LVK ++ M G G L P+ +++AV+ C + +VD
Sbjct: 301 LMTYGAVVDGLVKCGRVEDAWKVAQEMGGQG--LAPSEFVFSAVITGFCKSGEVDRALMV 358
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ MV P+ + Y+ + + ++ ++ E E F EM+ + P + ++ +
Sbjct: 359 WETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFH 418
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A+ W +++ G +P S ++L+ GL ++GRL D + M+ R
Sbjct: 419 IANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGR 470
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 21/266 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G V A + MV R + N V+ Y + R ++ EA K M
Sbjct: 345 GFCKSGEVDRALMVWETMVAARVKPN---VVLYSAMIDGFARSGRMTEAEKLFEEMVDAK 401
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + +S+ + + +S+ + W+ M+ +G +P I Y+ ++ LC+ + +
Sbjct: 402 CIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVG--CVPTAISYSILISGLCDVGRLKD 459
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAI 178
+ M+ G PD++ Y + + L + V F++M+ K + +P ++ +
Sbjct: 460 AMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLL 519
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL-SDVRRFAEEMLNRRI 237
L+ ++ A+++ N +L+ P + N+ LR G L R F E ++ R
Sbjct: 520 DALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIF---LREFGVLEGKGREFLEGLVMR-- 574
Query: 238 LIY--------DVTMQKLKKAFYNES 255
L Y DV M L K E+
Sbjct: 575 LCYRDRYRAAGDVVMVMLAKYIVPEA 600
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L V+EA+ + M + + + F+ L +++ D V+L+ M
Sbjct: 200 YSTVVSALADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVNGAVKLFRFMQ 258
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G L + YN ++ L + +M G P +TY + + L+K +
Sbjct: 259 LKGCTL--TAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGR 316
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + EM P+ + IT + E + A+ +W ++ + P +
Sbjct: 317 VEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSA 376
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
++ G GR+++ + EEM++ + + VT + + +++ + S R
Sbjct: 377 MIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSR 424
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
+NL+P+ Y+ VV L + V+ +MV G + +N + + +++ V+
Sbjct: 190 AWNLVPDKFTYSTVVSALADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVN 248
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F M T + + LL E A+ I + GI+P + ++
Sbjct: 249 GAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVV 308
Query: 214 VGLRNLGRLSDVRRFAEEM 232
GL GR+ D + A+EM
Sbjct: 309 DGLVKCGRVEDAWKVAQEM 327
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN++EA+KTF EM E F P+ Y + + +++A ++L M P+
Sbjct: 368 KDGNMLEASKTFQEMSE-FGLYPD-CFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPS 425
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K D L M+ G L+P+++ +N ++ + F
Sbjct: 426 VTTYTLLINACCKSGDMAMAEYLLQRMMLEG--LIPDVVTFNCLIDGFGKKGYLQKAFEL 483
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D M G PD++TYN + LI +E ++ HE+I+ P + I
Sbjct: 484 LDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSK 543
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E A +W+Y+ E + P + + LL G R+ + +ML+
Sbjct: 544 KGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLD 594
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
FN+ PN+ +Y++ + LC + ++ + F +M G +PD Y +I K +++
Sbjct: 350 FNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINK 409
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN----GILPLEASAN 210
+ EM+K P+ T T+L++A + + Y+L+ G++P + N
Sbjct: 410 AFQYLGEMLKFGITPS----VTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFN 465
Query: 211 VLLVGLRNLGRLS------DVRRFAEEMLNRRILIYDVTMQKL-KKAFYNESRSMRDRFD 263
L+ G G L D+ R A ++ + Y+ + L + + NE+ +D
Sbjct: 466 CLIDGFGKKGYLQKAFELLDIMRSAG--MSPDTVTYNALIHSLIARGYPNEA---KDILH 520
Query: 264 SLERR 268
L RR
Sbjct: 521 ELIRR 525
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ +A + GEM+ +F P V Y + + + A L+ M E
Sbjct: 400 GYCKVGDINKAFQYLGEML-KFGITPS-VTTYTLLINACCKSGDMAMAEYLLQRMMLEGL 457
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D K +L DIM G + P+ + YNA++ L +
Sbjct: 458 IPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMS--PDTVTYNALIHSLIARGYPNEA 515
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+++ G PD +T+ + + K E + M + +P + C+ +
Sbjct: 516 KDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNG 575
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A + A ++ +L+ G+ P N L+ G + G ++ M++ L
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFL 633
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ +A T+ EM++R +V+ Y + + L + + +D+A++ L M
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL--PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + + M G P+++ YN+++ LC N
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE--PDVVTYNSLMDYLCKNGRCTEA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + I
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A+ +++ + + G+ P + ++ L GR+ D R+ E+M++ R+
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+A+ L L K+ +A+ LR M C P + ++ L L N S ++L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G + P+++ Y V+ D+D + + +M+ G P+ +TYN I L
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALC 245
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + + M+KN P NC T +++ + +P+ AI + +G+ P
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMP---NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ N L+ L GR ++ R+ + M R
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A + F +M++ +P +++ Y + + +L + D+A + L ++ C
Sbjct: 421 KSGRVEDAMRYFEQMIDE-RLSPGNIV-YNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG PN+I Y+ ++ C +D +
Sbjct: 479 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PNIITYSTLIDGYCLAGKMDEATK 535
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TYN + K ++ + F EM + P + + L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I E+G ++ N++L GL
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + +VD+A+ M+ +
Sbjct: 348 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 405
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K ++ ++ M I L P I+YN+++ LC + D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G D++ +N I + K +V E E F M++ +P + +T I
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDG 523
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRR 236
A + + A ++ ++ G+ P + N L+ G + R+ D R ++
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 584 IITYNIILQGL 594
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++++AL R M+
Sbjct: 523 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC NN D
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEA 638
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ L+K + E ++ F + N P
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M P
Sbjct: 148 KEGEIRLAQSVF-DGITKWGLRPS-VVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N +D
Sbjct: 206 VYTYSVLINGLCKESKMDEAHKLFDEMLDRG--LVPNGVTFTTLIDGHCKNGKLDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + S L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLS 374
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L M G + P++ Y+ ++ LC + +D
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDEAH 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ FD+M+ G P+ +T+ + + KN K+ + +M+ + P + T I L
Sbjct: 227 KLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V+ L E RS+
Sbjct: 347 VSYTALISGLCKEGRSV 363
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+L FF+ +D K + ++D + G L P+++ +N ++ D+D FR
Sbjct: 135 SLYFFNILMDRFCKEGEIRLAQSVFDGITKWG--LRPSVVSFNTLMNGYIKLGDLDEGFR 192
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD TY+++ L K K+ E F EM+ P + T I
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHC 252
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A+EI+ +L G P + N L+ GL G L + +EM
Sbjct: 253 KNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 2/185 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + ++DEA K M P F+ +D K ++++
Sbjct: 206 VYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYK 265
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ GF+ P+ I YN ++ LC D+ D+M G PD +TY + + K
Sbjct: 266 QMLSQGFS--PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + MIK + ++ I+ L A ++ +L G+ P +
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGT 383
Query: 209 ANVLL 213
+++
Sbjct: 384 YTIVM 388
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG++ AN+ M + P +V+ Y T L L ++ EA + L M ++C
Sbjct: 295 GICKEGHLEVANEILNRM-PSYGLKP-NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G MP++I Y V+ C +D
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLIDEA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + + E +MI+ P P+ T I
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 241 DVTMQKLKKAFYNESR 256
+ + A E R
Sbjct: 531 TIIYSSIACALSREGR 546
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V+A + +M++ + P + + + T + L + V++A++ L+ M C
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ--QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S +D L K + ++L ++MV G + PN I+Y+++ L V+ V
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS--PNTIIYSSIACALSREGRVNKV 550
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ FD + D++ YN + L K + +FF M+ N P
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VD ++ L M C P + ++ ++ K V L M G PN + Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK--PNTVSY 429
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
V+ LC+ + QM+ G P+ +T+N + L K V + +M+
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P ++ +T I L A + E A+E+ N ++ GI P + + L GR++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
V + + I D T++ YN S SL +RW+T +
Sbjct: 550 VIQMFDN-------IKDTTIRS-DAVLYNAVIS------SLCKRWETDR 584
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDEA+ LR + C + ++ L L +L D MV + + PN++ +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV--DCAPNIVTF 254
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++G LC N + V QM HG PD Y I + + K + + M
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P + T + L A+ + A E+ + + + + + N+L+ G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
V E+ML+ + +T + F E
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RG+ D AL+ L M + C P + L+ + ++V++ + M G L +
Sbjct: 124 RGRIAD-ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL--D 180
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
N V+ +C VD ++ F G D ++YN + + L K+ +VE
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM++ + P + T I L E E+ + E+G P ++ G+ G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 221 RLSDVRRFAEEMLNR--------RILIYDVTMQKLKKA 250
L A E+LNR ++ Y+ ++ L A
Sbjct: 301 HL----EVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A + EM F+ Y L R +++ L M + C
Sbjct: 120 GLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC 177
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ L+ + + V L + G +++ YNAV+ LC +V
Sbjct: 178 TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE--ADIVSYNAVLKGLCMAKRWGDV 235
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+MV P+ +T+N + L +N V +M ++ P AT I
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A EI N + G+ P N +L GL + R + EM + +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 241 DVT 243
DVT
Sbjct: 356 DVT 358
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG++ AN+ M + P +V+ Y T L L ++ EA + L M ++C
Sbjct: 295 GICKEGHLEVANEILNRM-PSYGLKP-NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G MP++I Y V+ C +D
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG--CMPDVITYTTVINGFCKEGLIDEA 410
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + + E +MI+ P P+ T I
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 241 DVTMQKLKKAFYNESR 256
+ + A E R
Sbjct: 531 TIIYSSIACALSREGR 546
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V+A + +M++ + P + + + T + L + V++A++ L+ M C
Sbjct: 435 GLCSAGRWVDAEELMSQMIQ--QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S +D L K + ++L ++MV G + PN I+Y+++ L V+ V
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS--PNTIIYSSIACALSREGRVNKV 550
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ FD + D++ YN + L K + +FF M+ N P
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VD ++ L M C P + ++ ++ K V L M G PN + Y
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK--PNTVSY 429
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
V+ LC+ + QM+ G P+ +T+N + L K V + +M+
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P ++ +T I L A + E A+E+ N ++ GI P + + L GR++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
V + + I D T++ YN S SL +RW+T +
Sbjct: 550 VIQMFDN-------IKDTTIRS-DAVLYNAVIS------SLCKRWETDR 584
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDEA+ LR + C + ++ L L +L D MV + + PN++ +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV--DCAPNIVTF 254
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++G LC N + V QM HG PD Y I + + K + + M
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P + T + L A+ + A E+ + + + + + N+L+ G +
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
V E+ML+ + +T + F E
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
RG+ D AL+ L M + C P + L+ + ++V++ + M G L +
Sbjct: 124 RGRIAD-ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL--D 180
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
N V+ +C VD ++ F G D ++YN + + L K+ +VE
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
EM++ + P + T I L E E+ + E+G P ++ G+ G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300
Query: 221 RLSDVRRFAEEMLNR--------RILIYDVTMQKLKKA 250
L A E+LNR ++ Y+ ++ L A
Sbjct: 301 HL----EVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A + EM F+ Y L R +++ L M + C
Sbjct: 120 GLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGC 177
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ L+ + + V L + G +++ YNAV+ LC +V
Sbjct: 178 TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE--ADIVSYNAVLKGLCMAKRWGDV 235
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+MV P+ +T+N + L +N V +M ++ P AT I
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A EI N + G+ P N +L GL + R + EM + +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 241 DVT 243
DVT
Sbjct: 356 DVT 358
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KEGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDDANKLFDEMLEKG--LVPNSVTFTTLIDGHCKNGWVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 270 YKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG V EA+ M+ R E N V+ Y + +VD A+K M ++C
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPN---VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ ++ K+ + L++ M L PN + YN ++ LC+ + +
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSR--QELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +MV G PD +TY + + L KN+ + + + + W P T + +
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A E E A ++++ + G+ P + N+++ GL G L++ + EM D
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466
Query: 243 TMQKLKKAFYNESRSMR 259
T + + F + ++R
Sbjct: 467 TYNLITRGFLRNNEALR 483
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G EG + EA F +M+ E F+ N V+ Y T + L + +QV EA M +
Sbjct: 124 GLCVEGKIGEALHLFDKMIGEGFQPN---VVTYGTLINGLCKDRQVTEAFNIFSEMITKG 180
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +++ + L KL + H L + MV +MP++ N VV LC V
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD--SKIMPDVFTLNTVVDALCKEGMVAE 238
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D M+ G P+ +TYN + + +V F M+ + ++ T I
Sbjct: 239 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 298
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A+ ++ + + P + N L+ GL ++GRL D EM+ R
Sbjct: 299 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 354
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV R + P+ ++ Y T L + + +D+A+ L+ ++G N
Sbjct: 334 GLCHVGRLQDAISLFHEMVARGQI-PD-LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 391
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ LD + + + L+ + G L PN+ YN ++ LC +
Sbjct: 392 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG--LQPNVWTYNIMIHGLCKQGLLAEA 449
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+ F +M +G P+ TYN+I ++N + EM+
Sbjct: 450 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 2/225 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
++ TF + +DEAL M + P+ F+ L + K + + L M
Sbjct: 12 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
F + P++ V+ LC+ N VD F +++ G PD+ T+ + L
Sbjct: 72 DS--FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ E + F +MI +QP + T I L + A I++ ++ GI P + N
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
L+ GL L V EM++ +I+ T+ + A E
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG 234
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA TF M+ + P + + L ++ + K L R M P + +
Sbjct: 28 EALSTFNRMLHK--QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ L LN ++ +G P+ + ++ LC + FD+M+
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P+ +TY + L K+++V E N F EMI P + + I L E +
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ N ++++ I+P + N ++ L G +++ + M++R +
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 7/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K +V +A F EM R E P V Y T + L ++ +A+ M
Sbjct: 299 GYCKIQSVDKAMYLFEEM-SRQELTPNTV-TYNTLIHGLCHVGRLQDAISLFHEMVARGQ 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + D L K + H + ++ I G N P++ +Y ++ +C ++++
Sbjct: 357 IPDLVTYRTLSDYLCK---NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 413
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G P+ TYN++ L K + E F EM KN P
Sbjct: 414 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 473
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L +E IE+ +L G ++ S LLVG+
Sbjct: 474 GFLRNNEALRTIELLEEMLARG-FSVDVSTTTLLVGM 509
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L + + A + +M P + ++ +D ++ V+++D
Sbjct: 708 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 767
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G +PN+ YN ++ C +D +QM G D++TYN + L
Sbjct: 768 TMVHKG--CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ FHEM+ + P D + I + +Y+ +N L A
Sbjct: 826 VGRLQHAIALFHEMVASGQIP---------------DLVTYRI-LLDYLCKNHHL---AE 866
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
A VLL + L+ IL+Y++ + + +A E + RD F +L +
Sbjct: 867 AMVLLKAIEG------------SNLDADILVYNIAIDGMCRA--GELEAARDLFSNLSSK 912
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 12/201 (5%)
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG----IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
L + + L L+KL V +M G I + P++ YN+++ LCN + +
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKH 691
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V ++MV P+ + ++ + + L K + + MIK +P T
Sbjct: 692 VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD----VVTYT 747
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+D E + A+++++ ++ G +P S N+L+ G + R+ E+M +
Sbjct: 748 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 807
Query: 236 RILIYDVTMQKLKKAFYNESR 256
++ VT L + R
Sbjct: 808 GLIADTVTYNTLIHGLCHVGR 828
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +++ + L L + H L + MV +MPN+++++ VV LC +
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ G PD +TY + + ++ E F M+ P + I
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A+ + + G++ + N L+ GL ++GRL EM+
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 6 GNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G+ EA++ + EM +R ++ V++Y + + + + + K MK P
Sbjct: 283 GSPREADRIWREMCKRRIHYD---VVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDR 339
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
K +++ + L K + + L M G + PN + YN+++ LC +D F
Sbjct: 340 KIYNSVIFALAKGRHVSEAINLMKTMEEKG--IAPNTVTYNSLIKPLCRARKIDEARGLF 397
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
D+M+ HG P TY+ F L + EV M K PT I
Sbjct: 398 DEMLQHGHSPTIRTYHAFFRSL---RTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRW 454
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + ++WN I ENG+ P +S VL+ GL G+L + +F +M +++L
Sbjct: 455 RQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLL 508
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 32/200 (16%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K GN+ + K + +M E P+ + Y + + L +G+ V EA+ ++ M+ +
Sbjct: 314 YSKAGNLYKVFKLYNQMKE-VGIEPDRKI-YNSVIFALAKGRHVSEAINLMKTMEEKGIA 371
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG---------------------FNLM-- 98
P +++ + L + L+D M+ G F L+
Sbjct: 372 PNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFALLEN 431
Query: 99 -------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
P + Y ++ C D+VF+ ++Q+ +G PD +Y ++ L N K
Sbjct: 432 MRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGK 491
Query: 152 VHEVENFFHEMIKNEWQPTP 171
+ E F+ +M + + P P
Sbjct: 492 LEEAYKFYADMKEKQLLPDP 511
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ EA+ F M E A+ + L L ++ EA+ L +M +
Sbjct: 370 KSGHASEAHNVFCRMWNSHEKGDRD--AFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTD 427
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L KL + L+D M G ++P++ YN ++ VD
Sbjct: 428 VGMYNMVFSALGKLKQVSFISNLFDKMKTNG--IIPDVFTYNIMISSYGRVGLVDKASEL 485
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+ M PD +TYN + CL K+ + E F EM + + P + I
Sbjct: 486 FEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGK 545
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+++ E A +++ ++ G P + N+LL L G+ + + E M + ++ +T
Sbjct: 546 SNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSIT 605
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
L++ R++R R + W S +
Sbjct: 606 YSILERLESRSQRTVRIRKPTRISGWVVSPL 636
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + VD+A + MK ++C P ++ + + K ++ + +D
Sbjct: 221 IFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFD 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L NLI +N ++ L N VD V +MV + P+ TY++ + L
Sbjct: 281 EMVSKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILAT 338
Query: 149 NKKVHEV 155
++H +
Sbjct: 339 EGQLHRL 345
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ + +R ++V + + M+ + + ++ LD L K Q+++ M
Sbjct: 189 YKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMK 248
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ +P+ Y ++ + FFD+MV G + + +N I E L KNK
Sbjct: 249 QK--HCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKM 306
Query: 152 VHEVENFFHEMIKNEWQP 169
V +V +M++N+ QP
Sbjct: 307 VDKVIFVLSKMVENDCQP 324
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITL-IRGKQVDEALKFLRVMKGEN 59
G+ + GN+ A + M++ + P+ Y + L +RG +D AL M
Sbjct: 137 GYCRAGNIDAARR----MIDSVPFAPD-TFTYNPLIRALCVRGCVLD-ALAVFDDMLHRG 190
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P++ +S LD K + V L D M G P+++ YN ++ +C+ DV
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE--PDIVTYNVLINAMCSQGDVGE 248
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + + +G PD++TY + + L +++ E + +M N+ P + IT
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A ++ + E+G P + + ++ GL R+ + + +E+L
Sbjct: 309 SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA+K +M + P+ V + + +L + V A K L M C P + +S+
Sbjct: 283 EADKLLTKMFSN-DCAPDEV-TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSS 340
Query: 70 ALDILVKLNDSTHTVQLWDIMVG--IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+D L K ++L ++ + N +P+ + +N ++ LC D + D+M
Sbjct: 341 IMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400
Query: 128 VFHGAFPDSLTYNMIFEC-LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
HG PD TYN I + L K+ K E + + M+ N P + L DE
Sbjct: 401 SEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDE 460
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGL 216
E AI ++ + G+ P + N +L+GL
Sbjct: 461 MERAIGMFRRVQAMGLSPDKMLYNAILLGL 490
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
G KE V EA K E++ E N P+ V + T + +L + D A+K + M
Sbjct: 344 GLCKERRVDEAIKLLKELLAEMVSKNCIPDQV-TFNTIITSLCQKGLFDRAIKVVDEMSE 402
Query: 58 ENCFPTLKFFSNALD-ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
C P + ++ +D L K + + L ++MV G L P+ Y ++ L ++
Sbjct: 403 HGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNG--LCPDTTTYKSLAFGLSREDE 460
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
++ F ++ G PD + YN I L K + +FF M+ N P
Sbjct: 461 MERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 55/145 (37%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ YN ++ LC V + FD M+ G P +TY+++ + K +
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVL 217
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM +P + I + + A+++ N + G P + +L L +
Sbjct: 218 LDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVT 243
R + + +M + +VT
Sbjct: 278 SERWEEADKLLTKMFSNDCAPDEVT 302
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G+V A K F M + + Y + L+ + A+ +R M+ E P
Sbjct: 165 RAGDVKGAAKLFEFM--QLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 222
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D LV+ ++ + M G L N +Y+ V+ C + ++D +
Sbjct: 223 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNG--LARNEFVYSTVITGFCKSGEIDCALKV 280
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ MV P+ + Y+ + L K+ E E F EMI ++ P + + I
Sbjct: 281 WEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFK 340
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A+ +W ++ G +P S ++L+ GL N+GRL D + ML+R
Sbjct: 341 IGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDR 392
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A K + MV P VL Y + L ++ EA R M C
Sbjct: 267 GFCKSGEIDCALKVWEAMVAS-PVRPNVVL-YSAMIGGLANFGKMTEAELLFREMIDSKC 324
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + + + K+ D++ + +W+ M+G G MPN + Y+ ++ LCN + +
Sbjct: 325 APNIITYGSMIQGYFKIGDTSRALSVWEEMIGAG--CMPNAVSYSILINGLCNVGRLKDA 382
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAIT 179
+ M+ G PD++ Y + + L + V F++M+ + P ++ +
Sbjct: 383 MMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLD 442
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
LL A + A+++ N +L+ G P + N+ L
Sbjct: 443 GLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFL 476
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + E++ ++ P+ Y T + L +VD+A+ + M + + F+
Sbjct: 102 ALRILHEIIPGWDLAPDK-FTYSTVVSALADAGRVDDAVALVHEMVADGVVAA-EAFNPV 159
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L +++ D +L++ M G +P YN +V L +M
Sbjct: 160 LRAMLRAGDVKGAAKLFEFMQLKG--CVPTAATYNVLVHGLLVCGRAGAAMGVMRRMERE 217
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P +TY + + L++ +V + EM +N +T IT + E + A
Sbjct: 218 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCA 277
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++W ++ + + P + ++ GL N G++++ EM++ + +T + +
Sbjct: 278 LKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQG 337
Query: 251 FYNESRSMR 259
++ + R
Sbjct: 338 YFKIGDTSR 346
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L+R +V +A K M+ +S + K + +++W+
Sbjct: 223 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWE 282
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV + PN+++Y+A++G L N + F +M+ P+ +TY + + K
Sbjct: 283 AMVA--SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFK 340
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + EMI P ++ + I L + + A+ +W ++L+ G P +
Sbjct: 341 IGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIA 400
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEML 233
++ GL G + R +ML
Sbjct: 401 YTSMIKGLCVSGMVDGGLRLFYDML 425
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 101/252 (40%), Gaps = 6/252 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+EAN+ M++R ++ Y T + L ++ EA + M+ C P
Sbjct: 203 KEGKVIEANELLEVMIQR--GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPD 260
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG----IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + L + + +QL M+ G P LI Y+ ++ LC + D
Sbjct: 261 AIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 320
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD ++Y + + K + + F+EM+ QP + I
Sbjct: 321 ARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
ML + A ++ +++ G +P + L+ GL R+S + +M +
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440
Query: 240 YDVTMQKLKKAF 251
VT L K
Sbjct: 441 NVVTCATLMKGL 452
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 10/272 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G EA + F EM + P+ V++Y + + R + +A M
Sbjct: 492 GLCKCGREDEARELFKEM-KALGVIPD-VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS +D+L K +L ++M+ G +PN + Y +V LC N+ +
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG--CIPNTVTYTTLVKGLCMNDRISEA 607
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ------PTPLNC 174
+ F +M G PD +TY + + L + + +M+ + Q P ++
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ I L + A E++ + G++P S L+ G G+L D + EM++
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727
Query: 235 RRILIYDVTMQKLKKAFYNESRSMRDRFDSLE 266
+ + + VT + F E + + F +E
Sbjct: 728 QGVQLNAVTYSVMIHGFCKEGQIDKALFQKME 759
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V+EANK +++R P+ V+ T + L ++ +A + M+ C P
Sbjct: 384 KKGKVIEANKLLEVVIQR-GCIPD-VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 441
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG----IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + + L + + ++L M+ G N PN I Y+ ++ LC D
Sbjct: 442 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 501
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD ++Y + ++ K + + F+EM+ QP + I
Sbjct: 502 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 561
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
ML + A E+ +++ G +P + L+ GL R+S+ + +M L
Sbjct: 562 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 621
Query: 240 YDVTMQKLKKAF 251
VT L K
Sbjct: 622 DVVTYGTLMKGL 633
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 6/229 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+EAN+ MV+R ++ Y T + L ++ EA + MK C P
Sbjct: 22 KEGKVIEANELLEVMVQR--GCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 79
Query: 64 LKFFSNALDILV---KLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ + L K+N + H Q + + G P L+ Y+ ++ LC + D
Sbjct: 80 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDE 139
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD ++Y + ++ K + + F+EM+ + + I
Sbjct: 140 ARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLID 199
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
+L + A E+ +++ G + + + L+ GL R+S+ R
Sbjct: 200 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM------KGENCF 61
+ EA + F M ++ P+ +AY T + L + ++ AL+ + M G C
Sbjct: 242 ISEATRLFMSM-QKLGCRPD-AIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCK 299
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PTL +S +D L K +L+ M G +MP++I Y ++ C + +
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQG--IMPDVISYTTLIHGFCLSGKWEKAK 357
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F++M+ G PD T +++ + L K KV E +I+ P + C T + L
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A +++ + + G +P + L+ GL G + + ML+
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
G NC P +S +D L K +L+ M +G ++P++I Y +++ C +
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG--VIPDVISYTSLIHGFCRSGK 533
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ F++MV G PD T++++ + L K KV E MI+ P + T
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ L D A +++ + + G LP + L+ GL G + ++ML+
Sbjct: 594 LVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 651
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 12/242 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVE---RFEWNPEHVL-AYETFLITLIRGKQVDEALKFLRVMK 56
G + GN+ A + EM+ R+ + L +Y + L + ++ DEA + + MK
Sbjct: 270 GLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 329
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P + ++ + L++ M+ +G P++ + ++ +LC
Sbjct: 330 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ--PDVTTSSVLIDMLCKKGK 387
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V + + ++ G PD +T + + L ++ + F +M K P + CAT
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447
Query: 177 AITMLLDADEPEFAIEIWNYILEN----GI--LPLEASANVLLVGLRNLGRLSDVRRFAE 230
+ L + + A+E+ +L + GI P S ++++ GL GR + R +
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507
Query: 231 EM 232
EM
Sbjct: 508 EM 509
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 8/211 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ ++Y + L + + DEA + + MK P + +++ + + L+
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV IG P++ ++ ++ +LC V + M+ G P+++TY + + L
Sbjct: 542 NEMVDIGVQ--PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN------G 201
N ++ E F +M K P + T + L + A+E+ +L +
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P S ++++ GL GR + R +EM
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM------KGENCF 61
+ EA + F +M ++ P+ V+ Y T + L + + AL+ + M G N
Sbjct: 604 ISEATQLFMKM-QKLGCLPD-VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +S +D L K +L+ M +G ++PN+I Y +++ C + +++
Sbjct: 662 PDVISYSIIIDGLCKHGREDEARELFKEMKALG--VIPNVISYTSLIHGFCRSGKLEDAK 719
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
F++MV G +++TY+++ K ++ + F +M N
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+++Y + L + ++ DEA + + MK + P + +++ + + L++
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ +G ++ + ++ +LC V + M+ G D +TY+ + + L
Sbjct: 181 EMLDVGIR--SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN----GI-- 202
++ E F M K +P + T + L A+++ +L + GI
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P S ++++ GL R + R +EM + I+
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIM 334
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 10/233 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+AY T + L ++EAL+ M+ C P + +S +D K D + W
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ G PN++ Y +V +LC N+ D ++M G P+++T+N + L
Sbjct: 408 NRMISHGCR--PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGIL 203
N +V M + P T LLDA ++ E A ++ I +
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPN----ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + N +L G G + + + + L R +T + A+ + +
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 17 EMVER--FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
+VE+ E + + + TF+ L +V+ A+K L M+G C P + ++ LD L
Sbjct: 440 SLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
++N L+ + NL PNL+ YN V+ + + F + + G P
Sbjct: 500 FRMNKYEEAFGLFQEIEA--RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIK-NEWQPTPLNCATAITMLLDADEPEFAIEI 193
DS+TYN + K KV + EW P + + I + E A+
Sbjct: 558 DSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAF 617
Query: 194 WNYILENGILPLEASANVLL 213
+ + GI P A+ N L+
Sbjct: 618 LDKAINQGICPNFATWNALV 637
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 6/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + A K GEM++ +P +V++Y + +L V+ A M C
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDN-GVDP-NVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ F+ + + LW +M+ G PN++ YN ++ LC+N ++
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE--PNVVAYNTLIHGLCSNGSLEEA 368
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ DQM G P+ TY+++ + K+ + ++ MI + +P + + +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A + + G P + N + GL GR+ + E M L
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 241 DVTMQKLKKAFY--NESRSMRDRFDSLERR 268
T +L A + N+ F +E R
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEAR 518
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V A+K F EM + P + Y T + +L + ++D+A + K P+
Sbjct: 191 KNDRVDAAHKLFVEMSNK--GCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PS 243
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D + K ++L M+ G + PN++ Y+ ++ LC + +V+ F
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD--PNVVSYSCIINSLCVSGNVELAFAL 301
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM G + T+ + + K++E + + MI++ +P + T I L
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
E A+++ + + +G LP + ++L+ G G L A E NR I
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG----ASETWNRMI 411
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 33 ETFLITLIRGKQ----VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
E I +I G + ++ALK + C PT++ +++ LD L+ N L+
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L+PN+ YN ++ LC N+ VD + F +M G PD++TY + L K
Sbjct: 169 NMKKDG--LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCK 226
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K+ + + ++P+ I + E AI++ +++NG+ P
Sbjct: 227 AGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P + +YN ++ L + N + + M G P+ TYN++ + L KN +V
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F EM P + T ++ L A + + A E L P N L+
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALID 252
Query: 215 GLRNLGRLSDVRRFAEEMLNRRI 237
G+ GR+ + EM++ +
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGV 275
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG+V A + F E + P+ ++ Y + + L + AL+ + M E C
Sbjct: 337 GLCAEGDVERALELFNEAQAK-GIKPD-IVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 394
Query: 61 FPTLKFFSNALDILVKL-NDSTHTVQLWD-IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ ++ ++ L K+ N S TV + D IM G +P++ +N ++ C +D
Sbjct: 395 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG----YLPDVFTFNTLIDGYCKRLKLD 450
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M +G PD++TYN + L K KV+EV F EMI P P+ I
Sbjct: 451 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+++ E A ++ + + G+ P S N L+ G G L
Sbjct: 511 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 112/295 (37%), Gaps = 65/295 (22%)
Query: 4 KEGNVVEANKTFGEMVER------FEWN------------PEHV--------------LA 31
K G+V+EA G++++R F +N PE V +
Sbjct: 201 KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVT 260
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L + EA+ +LR M + C P ++ +D K++ +L V
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 320
Query: 92 GIGF---------------------------------NLMPNLIMYNAVVGLLCNNNDVD 118
GF + P++++YN++V LC +
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 380
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + ++M G PD TYN++ L K + + ++ I + P T I
Sbjct: 381 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A+++ + E GI P + N +L GL G++++V +EM+
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 36/257 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+AY T + L +A + M + FP L F+ L L K D L
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213
Query: 89 --IMVGIGFNL------------------------------MPNLIMYNAVVGLLCNNND 116
I G+ NL +P+++ YN ++ LC +
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSM 273
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ +M+ G PD TYN I + K V E + + + P + +
Sbjct: 274 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 333
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG----RLSDVRRFAEEM 232
I L + E A+E++N GI P N L+ GL G L + AEE
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 233 LNRRILIYDVTMQKLKK 249
+ I Y++ + L K
Sbjct: 394 CHPDIQTYNIVINGLCK 410
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G V E N+TF EM+ + NP + Y + R +++EA K + M E
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNP---ITYNILIENFCRSNKMEEASKVIVKMSQEG 533
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P F+ + + D L+ + G++ + +N ++G ++
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD--TFNTLIGAFSGKLNMHM 591
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ FD+M+ G DS TY ++ + K V EMIK + P+ I
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651
Query: 180 MLLDADEPEFAIEIWNYILENGILP 204
L A+ I + +++ G++P
Sbjct: 652 SLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ +A + + + + P+ V + T + + ++D AL+ + M
Sbjct: 407 GLCKMGNISDATVVMNDAIMK-GYLPD-VFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L+ L K + + M+ G + PN I YN ++ C +N ++
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH--PNPITYNILIENFCRSNKMEEA 522
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ +M G PD++++N + +N + F ++ + + T
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
GNV +A + F M +R + Y T + L ++DEA+ L M+ E FP
Sbjct: 14 GNVDQAVEVFRGMSDRNCVADGY--TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 71
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
F+ + L K D + +L D M G +PN + YN++V LC +D +
Sbjct: 72 AFNVLISALCKKGDLSRASKLVDNMFLKG--CVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV + P+ +T+ + + +K+ + + + + ++ + ++ I+ L
Sbjct: 130 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 189
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ E +++W ++E G P + L+ GL G+ + + + EM N+
Sbjct: 190 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A+K M + P V Y + + L ++D+A+ L M C P
Sbjct: 82 KKGDLSRASKLVDNMFLK-GCVPNEV-TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPN 139
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F +D VK + V++ + G+ N Y++++ L ++ +
Sbjct: 140 DITFGTLVDGFVKHGRALDGVRVLVSLEEKGYR--GNEFSYSSLISGLFKEGKGEHGMQL 197
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +MV G P+++ Y+ + + L + K E + + EM P ++ + +
Sbjct: 198 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 257
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + AI +W + +N E ++L+ GL G+L + ++ML+R I + V
Sbjct: 258 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 317
Query: 244 MQKLKKAFYN 253
+ F N
Sbjct: 318 YSSMIHGFCN 327
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + + EMVE+ + + Y + L R + DEA ++L MK +
Sbjct: 184 GLFKEGKGEHGMQLWKEMVEK--GCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 241
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + + D + +W M N + + Y+ ++ LC N +
Sbjct: 242 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN--HHEVCYSILINGLCKNGKLKEA 299
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN--EWQPTPLNCATAI 178
+ QM+ G D + Y+ + + V + F++M+ + + QP + +
Sbjct: 300 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 359
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNRRI 237
+ AI+I N +L+ G P + ++ L LR N+ D R F +E++ R I
Sbjct: 360 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLI 419
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 58/152 (38%)
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+V LC +VD F M D TY+ + L ++ E + EM
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P P+ I+ L + A ++ + + G +P E + N L+ GL G+L
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 227 RFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
M+ + + D+T L F R++
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 157
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G E K F EM E + VLAY T + + +VD+A + L MK +
Sbjct: 596 GLVKAGFSRETYKLFYEMKE--QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ + + +D L K++ L++ IG +L N+++Y++++ +D
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL--NVVIYSSLIDGFGKVGRIDEA 711
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++++ G P+S T+N + + L+K +++ E + F M + P + + I
Sbjct: 712 YLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
L + A W + + G+ P + ++ GL G + + R
Sbjct: 772 LCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V AY T ++ + DEA L K + C P++ ++ L L + +++ D
Sbjct: 343 VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHD 402
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + PNL YN ++ +LC +++ + D M G FP+ +T N++ + L K
Sbjct: 403 EMRQ---DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCK 459
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+K+ E + F + P + I L + A ++ +L++ +P
Sbjct: 460 AQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVV 519
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+ GR D + +EM++R
Sbjct: 520 YTSLIQNFFKCGRKEDGHKIYKEMVHR 546
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+AY L L R +V+EAL+ M+ ++ P L ++ +D+L K + +++ D
Sbjct: 378 VIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQD 436
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PN++ N ++ LC +D F + PDS T+ + + L +
Sbjct: 437 TMKEAG--LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+V + + + +M+ ++ P + + I E +I+ ++ G P
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+ + ++ ++ EA + +M+ P ++ + L N + L+ M IG
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ N+ ++ +V + +D D+M + D + YN+ +C K KV
Sbjct: 234 YE--ANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDM 291
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FFHEM P + T I +L A + A+E++ + N +P + N +++
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIM 351
Query: 215 GLRNLGRLSDVRRFAE 230
G + G+ + E
Sbjct: 352 GYGSAGKFDEAYSLLE 367
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 5/171 (2%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL-MPNLI 102
+VD A KF MK + P ++ + +L K V+L++ + N +P +
Sbjct: 288 KVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE---ELDLNRSVPCVY 344
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN ++ + D + ++ G P + YN I CL + KV E H+
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALR-IHDE 403
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + P I ML A E E A+++ + + E G+ P + N+++
Sbjct: 404 MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMI 454
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 16/196 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVER------FEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 54
G+ K G + EA E++++ + WN L L++ +++DEA +
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWN--------CLLDALVKAEEIDEAQVCFQN 752
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
MK C P +S ++ L + W M G L PN I Y ++ L
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG--LKPNNITYTTMIAGLAKA 810
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+V FD+ G PDS YN + E L K + F E + C
Sbjct: 811 GNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTC 870
Query: 175 ATAITMLLDADEPEFA 190
+ L AD E A
Sbjct: 871 VVLLDALHKADCLEQA 886
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 97/235 (41%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V +A + +M++ + +V+ Y + + + + ++ K + M C
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQI--PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGC 548
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ +D + K + L++ + G L+P++ Y+ ++ L
Sbjct: 549 SPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG--LVPDVRSYSILIHGLVKAGFSRET 606
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ F +M G D L YN + + K+ KV + EM QPT + + +
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ G+ + L+ G +GR+ + EE++ +
Sbjct: 667 LAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 721
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G V EA + EM R + P ++ Y + L + +++ ALK MK FP
Sbjct: 390 RKGKVEEALRIHDEM--RQDAAP-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPN 446
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFR 122
+ + +D L K + + I +G+ + P+ + +++ L VD+ +
Sbjct: 447 IMTVNIMIDRLCK---AQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+++M+ P+ + Y + + K + + + EM+ P + + + +
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRIL 238
A E E ++ I G++P S ++L+ GL G + + EM L+ +L
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL 623
Query: 239 IYDVTMQKLKKA 250
Y+ + K+
Sbjct: 624 AYNTVIDGFCKS 635
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A F +M E +V+ Y T + +L + ++V+EAL MK ++
Sbjct: 89 GLCKIGETALAAGLFKKMEE--AGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDI 146
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ + L + L + M + N+MPN++ +N +V C V
Sbjct: 147 SPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL--NIMPNVVTFNVLVDTFCKEGKVLAA 204
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD +TYN + +V E F MI +P + + I
Sbjct: 205 EGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILING 264
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A +++N ++ G P S N L+ GL LGRL + + + M
Sbjct: 265 YCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 15/200 (7%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
NCF L+ +L K GI L P ++ + ++ L
Sbjct: 18 NCFCQLQRVDLGFSVLAK---------------GIKLGLQPTIVTFTTLINGLGKVGKFA 62
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
FD MV G PD TY I L K + F +M + Q + +T I
Sbjct: 63 QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L A++I++Y+ I P + L+ GL N R + EM + I+
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182
Query: 239 IYDVTMQKLKKAFYNESRSM 258
VT L F E + +
Sbjct: 183 PNVVTFNVLVDTFCKEGKVL 202
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ VVEA K F M+ + P+ V +Y + + K++DEA + M +
Sbjct: 229 GYSMWTEVVEARKLFDVMITK-GCKPD-VFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L +L L+ M G NL PNL Y ++ C +
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG-NL-PNLYTYAILLDGFCKQGYLGKA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR F M P+ + YN++ + K+ + + F E+ QP T I
Sbjct: 345 FRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIING 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L + A+E + + ++G P E S NV++ G S EM +R
Sbjct: 405 LCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 4/203 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F EM+ + P +V +Y T + L + ++ EA + M
Sbjct: 264 GYCKAKRIDEAKQLFNEMIHQGS-TPNNV-SYNTLIHGLCQLGRLREAQDLFKNMHTNGN 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ LD K +L+ M L PNL+MYN +V +C + ++ +
Sbjct: 322 LPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST--YLKPNLVMYNILVNAMCKSGNLKDA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ G P+ Y I L K + E F M + P + I
Sbjct: 380 RELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Query: 181 LLDADEPEFAIEIWNYILENGIL 203
L + A+ + + + G +
Sbjct: 440 FLQHKDESRAVHLIGEMRDRGFI 462
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 4/166 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+ A M E P+ V+ Y + + +V EA K VM + C P
Sbjct: 197 KEGKVLAAEGVLKTMTE-MGVEPD-VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ K QL++ M+ G PN + YN ++ LC +
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGST--PNNVSYNTLIHGLCQLGRLREAQDL 312
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M +G P+ TY ++ + K + + F M +P
Sbjct: 313 FKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 23/242 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G+ K G + A EM +R +P+ Y + L + + +A + L+ M G ++
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPD-TFTYSILINGLCKSSNLRKADELLQEMIGRKD 223
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C ++ F+ +D K D +L M+ G P+++ Y+ ++ LC DVD
Sbjct: 224 CCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG--CAPDVVTYSTIIDGLCRCGDVDK 281
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F ++MV G PD +TY ++ L K K+ E M+++ P + +
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L D+ + AN LL +R+ GR++DV F +L+ + +
Sbjct: 342 GLCKIDKLDM-------------------ANDLLTSIRDKGRITDVVAFEALLLSVKKRL 382
Query: 240 YD 241
D
Sbjct: 383 LD 384
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA + M + P+ V+ + T + L + ++DEA + L M+
Sbjct: 66 KSGKVPEAMEVVKNMKDG-ACKPD-VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAAN 123
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ ++ L S V +V G P+ YNA++ C + ++D + F
Sbjct: 124 LVTYNTLINGLSSAGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGF 178
Query: 124 FDQMVFH-GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAITML 181
++M G PD+ TY+++ L K+ + + + EMI + + + + T +
Sbjct: 179 LEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGY 238
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----I 237
A + + A E+ + +LE+G P + + ++ GL G + E+M++R +
Sbjct: 239 CKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298
Query: 238 LIYDVTMQKLKKA 250
+ Y V + L KA
Sbjct: 299 VTYTVLVTGLCKA 311
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P MYN V LC + V M PD +T+N + L K ++ E
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ EM ++ + + T I L A A+ + + P + N ++ G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHG 165
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
G + F EEM R
Sbjct: 166 FCKSGEIDRAYGFLEEMKQR 185
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A F +M++ +V+ Y + + ++ A++ L +MKG
Sbjct: 421 GFCSIGYIQKATAIFDQMLK--AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++N + + H L++ MV G + PN++ YNA++ VD+
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS--PNVVTYNAIINGYLTVAKVDDA 536
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +MV G P S TYNM+ K ++ E ENF +M+K P + + I
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A +I++ + + P + + L+ GL G+ D R ++ + Y
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTY 656
Query: 241 DVTMQKL 247
++ L
Sbjct: 657 TTLVRGL 663
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 74 LVKLNDSTHTVQLWDIMVG--IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
++K+ + VQ ++++G + P+ Y +++ C N ++D F FD+MV G
Sbjct: 208 MIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG 267
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
P+S+TY+ + L ++ E + EMI +PT I L DA A+
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAV 327
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++ + + G P + L+ GL G+ +ML ++ VT L
Sbjct: 328 KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387
Query: 252 YNESR 256
Y E R
Sbjct: 388 YVEGR 392
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PNL +NA++ +LCN V + +GA PD+ TY + KN +
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA 256
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F M+K+ P + + I L E A+++ +++ GI P + + +V
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L + GR + + +M R
Sbjct: 317 LCDAGRSCEAVKLLGKMKKR 336
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA EM+++ H AY +++L + EA+K L MK C
Sbjct: 281 GLCSEGRLEEAMDMLEEMIDKGIEPTVH--AYTIPIVSLCDAGRSCEAVKLLGKMKKRGC 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P ++ ++ + L + + ++ M+ G
Sbjct: 339 GPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALT 398
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ +PN YN ++ C+ + FDQM+ G P+ +TYN+I
Sbjct: 399 IFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYF 458
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K ++ M N + A I+ + E A ++N ++E+GI P
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518
Query: 208 SANVLLVGLRNLGRLSDV 225
+ N ++ G + ++ D
Sbjct: 519 TYNAIINGYLTVAKVDDA 536
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 91/229 (39%), Gaps = 4/229 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G V EA G + + P+ Y + +I + +D A + M + C P
Sbjct: 215 KGKVQEAELIMGHIF-HYGACPD-TFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNS 272
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S ++ L + + + M+ G P + Y + LC+ +
Sbjct: 273 VTYSALINGLCSEGRLEEAMDMLEEMIDKGIE--PTVHAYTIPIVSLCDAGRSCEAVKLL 330
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M G P+ TY + L ++ K +H+M+ + PT + + I L
Sbjct: 331 GKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVE 390
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
E A+ I+ ++L + LP + NV++ G ++G + ++ML
Sbjct: 391 GRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 37/264 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA G+MV++ +V+ Y +F+ L + + A K MK +
Sbjct: 561 GFSKTNRISEAENFCGKMVKQGLL--PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618
Query: 61 FPTLKFFSNALDILVK----------LNDS------THTV---------------QLWDI 89
FP L +S+ +D L + L+D T+T QL +
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G L P+ +Y A++ C N +V++ + FD MV G P Y + L K
Sbjct: 679 MKKKG--LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + F M+K W + + LL E + ++E+ +++E+ L
Sbjct: 737 NFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL-HVMESRNCTLNFQT 795
Query: 210 NVLLVG-LRNLGRLSDVRRFAEEM 232
V+L L LG ++ + ++++
Sbjct: 796 RVMLARELSALGCSIEIPQISKQL 819
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 2/167 (1%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+++D MV G + PN + Y+A++ LC+ ++ ++M+ G P Y +
Sbjct: 258 EMFDRMVKDGCD--PNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L + E +M K P I+ L + E AI +++ +L +G++P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ + L+ L GR E ML+ L T + K F
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V EA K EM + +P+ V+ Y T + + ++ +AL L M+ +
Sbjct: 323 GLCQAGKVDEAFKLKDEMEQLGIVSPD-VVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+L + + L + + ++M G L P++I YN ++ C +V
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG--LTPDVITYNTLIDASCKAGNVAKA 439
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+MV G D+ T N + L K K+ E E + + P ++ T +
Sbjct: 440 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAA 499
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+PE A+ +W+ +++ + P ++ N L+ GL +G+L++ E++ ++
Sbjct: 500 YFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPD 559
Query: 241 DVTMQKLKKAFYNE 254
D T + A+ E
Sbjct: 560 DTTYNIIIHAYCKE 573
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
++I YN ++ LC +NDVD RFF M G PD TYN++ L + + E +
Sbjct: 629 DVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKML 688
Query: 160 HEM 162
H++
Sbjct: 689 HKL 691
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 8/198 (4%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL- 97
L R Q++EAL L +M E P + ++ +D K + L D MV G +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454
Query: 98 --MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
N ++YN LC + G PD ++Y + K K
Sbjct: 455 TFTLNTLLYN-----LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ EMIK + P+ T I L + AI+ N ++E G++P + + N+++
Sbjct: 510 LCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHA 569
Query: 216 LRNLGRLSDVRRFAEEML 233
G L +F +M+
Sbjct: 570 YCKEGDLEKAFQFHNKMV 587
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 3/234 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTV 84
P LA + L T R + A + L + C P+L+ + L L + ++
Sbjct: 134 PTSALA-DAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQA 192
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L I L PN +N +V C+ + + +M G PD++TYN +
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ + E M K PT T ++ + A ++ + G P
Sbjct: 253 AHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD-VTMQKLKKAFYNESRS 257
+ NVL GL G++ + + +EM I+ D VT L A + RS
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRS 366
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ V +Y T + + + + AL M P++ ++ + L + T +
Sbjct: 488 PDEV-SYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAID 546
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G L+P+ YN ++ C D++ F+F ++MV + PD +T N +
Sbjct: 547 KLNELMEMG--LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNG 604
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ + F ++ + + T I L ++ + A+ + + G+ P
Sbjct: 605 LCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ NVLL L GR + A++ML++
Sbjct: 665 VFTYNVLLSALSEAGRSVE----AQKMLHK 690
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 88/256 (34%), Gaps = 55/256 (21%)
Query: 4 KEGNVVEANKTFGEMV------ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
K GNV +A EMV + F N T L L + K+ +EA + LR
Sbjct: 432 KAGNVAKAFVLMDEMVRSGLKMDTFTLN--------TLLYNLCKEKRYEEAEELLRAPPQ 483
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + K + LWD M I L P++ YN ++ L +
Sbjct: 484 RGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM--IKRKLTPSISTYNTLIKGLSTMGKL 541
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
++++ G PD TYN+I K +
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL------------------------- 576
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR-- 235
E A + N ++EN P + N L+ GL GRL + E + +
Sbjct: 577 ----------EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK 626
Query: 236 --RILIYDVTMQKLKK 249
++ Y+ +Q L K
Sbjct: 627 KVDVITYNTLIQALCK 642
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 4/187 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM++R + P + Y T + L ++ EA+ L + P ++ + K
Sbjct: 515 EMIKR-KLTPS-ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK 572
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
D Q + MV F P+++ N ++ LC ++ + F+ V G D
Sbjct: 573 EGDLEKAFQFHNKMVENSFK--PDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV 630
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TYN + + L K+ V FF +M QP ++ L +A A ++ +
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690
Query: 197 ILENGIL 203
+ E+G L
Sbjct: 691 LNESGKL 697
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 10/233 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+AY T + L ++EAL+ M+ C P + +S +D K D + W
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ G PN++ Y +V +LC N+ D ++M G P+++T+N + L
Sbjct: 408 NRMISHGCR--PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGIL 203
N +V M + P T LLDA ++ E A ++ I +
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPN----ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + N +L G G + + + + L R +T + A+ + +
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 6/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + A K GEM++ +P +V++Y + +L V+ A M C
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDN-GVDP-NVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ F+ + + LW +M+ G PN++ YN ++ LC+N ++
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE--PNVVAYNTLIHGLCSNGSLEEA 368
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ DQM G P+ TY+++ + K+ + ++ MI + +P + + +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A + + G P + N + GL GR+ + E M L
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 241 DVTMQKLKKAFY--NESRSMRDRFDSLERR 268
T +L A + N+ F +E R
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEAR 518
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V A+K F EM + P + Y T + +L + ++D+A + K P+
Sbjct: 191 KNDRVDAAHKLFVEMSNK--GCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PS 243
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D + K ++L M+ G + PN++ Y+ ++ LC + +V+ F
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD--PNVVSYSCIINSLCVSGNVELAFAL 301
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM G + T+ + + K++E + + MI++ +P + T I L
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
E A+++ + + +G LP + ++L+ G G L A E NR I
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG----ASETWNRMI 411
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 33 ETFLITLIRGKQ----VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
E I +I G + ++ALK + C PT++ +++ LD L+ N L+
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L+PN+ YN ++ LC N+ VD + F +M G PD++TY + L K
Sbjct: 169 NMKKDG--LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCK 226
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K+ + + ++P+ I + E AI++ +++NG+ P
Sbjct: 227 AGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P + +YN ++ L + N + + M G P+ TYN++ + L KN +V
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F EM P + T ++ L A + + A E L P N L+
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALID 252
Query: 215 GLRNLGRLSDVRRFAEEMLNRRI 237
G+ GR+ + EM++ +
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGV 275
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + F EM+E+ P+ L Y + R QVD+A M+ C
Sbjct: 235 GLCRAGKMKEAFELFEEMIEKDHIVPDQ-LTYNVIINGFCRLGQVDKARTIFGFMRKNEC 293
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDI------MVGIGFNLMPNLIMYNAVVGLLCNN 114
P NA + +N + +L ++ M G P+ + Y A++G LC +
Sbjct: 294 EP------NAFNYATLMNGHSRKGELENLRMVFEEMKSAGVE--PDAVSYTALIGCLCRH 345
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
VD +M G D +TYN++ E L K+K++ E + + Q LN
Sbjct: 346 GSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLLRSLPLEGVQ---LNV 402
Query: 175 AT---AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A+ + L + E A+ + +L G LP A++N LL+GL +GR++D
Sbjct: 403 ASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLIGLCGVGRVADA 456
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHE 154
++ PNL+ Y+ ++G LC + F F++M+ PD LTYN+I + +V +
Sbjct: 221 DVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDK 280
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F M KNE +P N AT + E E ++ + G+ P S L+
Sbjct: 281 ARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIG 340
Query: 215 GLRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKK 249
L G + + VR E+ ++ Y++ ++ L K
Sbjct: 341 CLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCK 379
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 23/212 (10%)
Query: 27 EHVLAYETFLITLIRGKQVD-EALKF-LRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
+H LA FL +L+R ++V +AL L + C L D++ L D +
Sbjct: 129 DHALALLRFLPSLLRRRRVSHKALAVCLDRLVSSRCPDVLS------DLIADLRDPRNK- 181
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM---VFHGAFPDSLTYNM 141
+ PN +YN ++ N D + FR D+M P+ +TY+
Sbjct: 182 ----------YLPTPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYST 231
Query: 142 IFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L + K+ E F EMI K+ P L I + + A I+ ++ +N
Sbjct: 232 LIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKN 291
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + L+ G G L ++R EEM
Sbjct: 292 ECEPNAFNYATLMNGHSRKGELENLRMVFEEM 323
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++ +V EA + F EM++R P+ ++++ + + R ++ AL + MKG P
Sbjct: 341 RKEDVWEAERVFNEMLQR-GVVPD-LISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ + +D + +++ + MV G + +++ YN ++ LC +D+
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERG--CVMDVVTYNTLLNGLCRGKMLDDADEL 456
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G FPD T + K+ + + + F M +P + T +
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E E A E+W ++ I P S ++L+ G +LG +S+ R +EM + I VT
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576
Query: 244 MQKLKKAF 251
+ K +
Sbjct: 577 CNTIIKGY 584
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMKGENCFPTLK 65
+A++ F EMVER + + L TLI G D +AL M + P +
Sbjct: 452 DADELFKEMVERGVFPDFYTLT------TLIHGYCKDGNMTKALSLFETMTLRSLKPDVV 505
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D K+ + +LW M I + P+ I ++ ++ C+ V FR +D
Sbjct: 506 TYNTLMDGFCKVGEMEKAKELWYDM--ISREIFPSYISFSILINGFCSLGLVSEAFRLWD 563
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P +T N I + ++ + + +F + MI P + T I + +
Sbjct: 564 EMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEE 623
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A + N + E G+LP + N +L G GR+ + +M+++ I
Sbjct: 624 NFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + ++D +L M+ + + L ++ ++ + + L D M G G L
Sbjct: 233 ALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG--L 290
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P L YNA++ LC + R D+M+ G P++ T+N + + + V E E
Sbjct: 291 KPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAER 350
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F+EM++ P ++ ++ + + E A+ + + G++P +L+ G
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYC 410
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+S + EM+ R ++ VT L
Sbjct: 411 RNDDVSGALKMRNEMVERGCVMDVVTYNTL 440
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 89/237 (37%), Gaps = 35/237 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GN+ +A F M R P+ V+ Y T + + ++++A + M
Sbjct: 478 GYCKDGNMTKALSLFETMTLR-SLKPD-VVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------------------------- 94
FP+ FS ++ L + +LWD M G
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595
Query: 95 -FNLM------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
N M P+ I YN ++ + D F + M G P+ +TYN I
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS 655
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ ++ E E H+MI P + I + D + A + + +L+ G +P
Sbjct: 656 RHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN+ +AN M+ E P + Y T + + ++ + D A + M+
Sbjct: 583 GYLRAGNLSKANDFLNTMIS--EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ L + + M+ G N P+ Y +++ + +++
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGIN--PDKSTYTSLINGYVSKDNMKEA 698
Query: 121 FRFFDQMVFHGAFPD 135
FR D+M+ G PD
Sbjct: 699 FRVHDEMLQRGFVPD 713
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A+ +++ R Q+ +ALK L +M+ P L + +D+ V+ N ++ + M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G ++PN++ YN ++ C+ + V+ + M G PD ++Y I L K K
Sbjct: 304 QVVG--IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 151 KVHEVENFFHEMIKNEW-QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ EV + +M K P + T I ML D + A+ E G +
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
+ ++ L GR+S+ + EM
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEM 444
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 8/237 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE +VE +M + P+ V Y T + L + DEAL FL+ + E F
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQV-TYNTLIHMLTKHDHADEALWFLKDAQ-EKGFRI 416
Query: 64 LKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
K +S + L K + L + M + P+++ Y AVV C +VD +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEM-----DCPPDVVTYTAVVNGFCRLGEVDKAKK 471
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M HG P++++Y + + + K E + ++ W P + + + L
Sbjct: 472 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 531
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ A ++ ++ G P N+LL L GR + R+F EE LN+ I
Sbjct: 532 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 588
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 11/242 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA EM P V+ Y + R +VD+A K L+VM P
Sbjct: 430 KEGRMSEAKDLINEM-----DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 484
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L+ + + S ++ ++ ++ PN I Y+ ++ L +
Sbjct: 485 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS--PNSITYSVIMHGLRREGKLSEACDV 542
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+MV G FP + N++ + L ++ + HE F E + +N T I
Sbjct: 543 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 602
Query: 184 ADEPEFAIEIWN--YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
DE + A+ + + Y++ + V +G + GR+++ ++ML++ I
Sbjct: 603 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK--GRIAEATELMKKMLHKGIDPTP 660
Query: 242 VT 243
VT
Sbjct: 661 VT 662
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 4/178 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G +EA + M E W+P + Y + L R ++ EA +R M +
Sbjct: 494 GMCRTGKSLEAREMMN-MSEEHWWSPNSI-TYSVIMHGLRREGKLSEACDVVREMVLKGF 551
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + L L + + + + + G + N++ + V+ C N+++D
Sbjct: 552 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI--NVVNFTTVIHGFCQNDELDAA 609
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D M D TY + + L K ++ E +M+ PTP+ T I
Sbjct: 610 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 667
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA K EMVE+ V+ + + + + +++A+ L +M+ + P
Sbjct: 337 KEGRMDEALKMLNEMVEK--GVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPN 394
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ + + + L + MV L P+++ YN ++ LC VD+ R
Sbjct: 395 VRTYNELICGFCRGKSMDRAMALLNKMV--ESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M+ G PD T+N CL + +V E + + + I
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + E A ++ +L LP + NV++ GLR G++ D E+M
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 92/233 (39%), Gaps = 8/233 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +V A F M R + ++Y + L ++ EAL+F M+ + C
Sbjct: 233 GYCRNDDVERACGVFCVMPRR------NAVSYTNLIHGLCEAGKLHEALEFWARMREDGC 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FPT++ ++ + L + + L+ M G PN+ Y ++ LC +D
Sbjct: 287 FPTVRTYTVLVCALCESGRELEALSLFGEMRERGCE--PNVYTYTVLIDYLCKEGRMDEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++MV G P + +N + K + + M + P I
Sbjct: 345 LKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A+ + N ++E+ + P + N L+ GL +G + R M+
Sbjct: 405 FCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMI 457
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + EAL M+ C P + ++ +D L K +++ +
Sbjct: 290 VRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLN 349
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G + P+++ +NA++G C +++ M P+ TYN + +
Sbjct: 350 EMVEKG--VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR 407
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K + ++M++++ P + T I L + + A ++ ++ +G P + +
Sbjct: 408 GKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWT 467
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N +V L +GR+ + + E + + +
Sbjct: 468 FNAFMVCLCRMGRVGEAHQILESLKEKHV 496
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 4/239 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ A +MVE + +P+ V+ Y T + L VD A + R+M +
Sbjct: 404 GFCRGKSMDRAMALLNKMVES-KLSPD-VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF 461
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + L ++ Q+ + + ++ N Y A++ C +++
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK--HVKANEHAYTALIDGYCKAGKIEHA 519
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ P+S+T+N++ + L K KV + +M K + +PT +
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEE 579
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+L + + A EI N ++ +G P + + + GRL + ++ N +L+
Sbjct: 580 VLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLL 638
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 9/210 (4%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVM---KGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+Y L+ L R VDE + + M G + FP L + L+ KL + +L+
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMA-VARLF 211
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + + P+L Y ++V C N+DV+ F M A ++Y + L
Sbjct: 212 FVRI-LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGLC 266
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ K+HE F+ M ++ PT + L ++ A+ ++ + E G P
Sbjct: 267 EAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVY 326
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ VL+ L GR+ + + EM+ + +
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGV 356
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V A++ F M+ R ++P+ + F++ L R +V EA + L +K ++
Sbjct: 439 GLCEVGVVDSASRLFRLMI-RDGFSPDQ-WTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ +D K H L+ M + +PN I +N ++ L V +
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRM--LAEECLPNSITFNVMIDGLRKEGKVQDA 554
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M P TYN++ E ++K + +I + +QP + I
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRR 236
E A E+ I G+L N+L+ +G L +RR
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPS 674
Query: 237 ILIYDVTMQKL 247
L Y + M+ L
Sbjct: 675 YLTYSILMKHL 685
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+++A + F EM + ++++ + L + +D+ALK+ R MK P
Sbjct: 478 NMMDAERIFDEMPS--QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ + + + +++ D M+ G L +++ YN ++ LC + F +
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXL--DVVTYNTILNGLCKEKMLSEADELFTE 593
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G FPD T+ + K+ +++ F MI+ +P + T I E
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E E+WN ++ I P S +L+ G N+G +S+ R +EM+ + +T
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 247 LKKAFYNESRSMR-DRFDS 264
+ K + +++ D F S
Sbjct: 714 IVKGYCRAGNAVKADEFLS 732
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA K EM+E + V+ Y T L L + K + EA + M
Sbjct: 542 GFCRNGVMSEALKVRDEMLE--QGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP F+ ++ K + V L+++M I NL P+++ YN ++ C ++++ V
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ M+ +P+ ++Y ++ V E + EM++ ++ T + C T +
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A A E + +L GI+P + N L+ G + +M N +L
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Query: 241 DVTMQKLKKAFYNESR 256
+T + F + R
Sbjct: 778 VITYNVILNGFSRQGR 793
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G KE + EA++ F EM ER + P+ + TF TLI G D +A+ +M
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVF-PD----FYTF-TTLINGYXKDGNMNKAVTLFEMMI 630
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + ++ +D K ++ +LW+ M I + PN I Y ++ CN
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGC 688
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FR +D+MV G +T N I + + + + F M+ P + T
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + + + A + N + +G+LP + NV+L G GR+ + +M+ R
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 237 I----------LIYDVTMQKLKKAF 251
+ + VT LK+AF
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAF 833
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + ++++ FL M+ + FP + ++ ++ + +L D M G G L
Sbjct: 367 ALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG--L 424
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P + YNA++ LC D+M+ G PD+ TYN++ +N + + E
Sbjct: 425 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 484
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM P ++ + I +L + A++ + + G+ P +L+ G
Sbjct: 485 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 544
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
G +S+ + +EML + + VT + E
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GN+ +A F M++R P+ V+ Y T + +G ++++ + M
Sbjct: 612 GYXKDGNMNKAVTLFEMMIQR-NLKPD-VVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ + + +LWD MV GF +I N +V C +
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE--ATIITCNTIVKGYCRAGNAVKA 727
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G PD +TYN + IK + + ++M + P + +
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A I ++E G+ P ++ L+ G L + R +EML R
Sbjct: 788 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L ++ + T ++ +++ E + RV+K + ++ ++ L LVK+ +++
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+V G + N+ N ++ LC N ++N F M G FPD +TYN + +
Sbjct: 349 VVRSGVQV--NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E M +P I L + A + + +L+ G+ P A+
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N+LLV + D R +EM ++ ++
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVV 495
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 4/252 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G + +A K F +M + P++V+ Y + R + EALK M + C
Sbjct: 509 SKNGCLDQALKYFRDM-KNAGLAPDNVI-YTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L+ L K + +L+ M G + P+ + ++ + +++
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERG--VFPDFYTFTTLINGYXKDGNMNKAVT 624
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+ M+ PD +TYN + + K ++ +V +++MI P ++ I
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ A +W+ ++E G + N ++ G G F ML + I+ +
Sbjct: 685 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744
Query: 243 TMQKLKKAFYNE 254
T L F E
Sbjct: 745 TYNTLINGFIKE 756
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + R + L L M+ PTL + + ++ L K D L+
Sbjct: 1012 HVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLF 1071
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M GF+ PN+ +YN+V+ LCN QM G PD +T+N + L
Sbjct: 1072 LEMRKRGFS--PNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1129
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + E+F E I+ E P L+ I E A ++ ++ G P
Sbjct: 1130 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1189
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKK 249
+ L+ GL G++S+ E+M R++ IY+V + L K
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1235
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV E FL IR + L + ++ G F A D+LV++ HT
Sbjct: 1133 HVRKAEHFLREAIRRELNPNQLSYTPLIHG---FCMRGELMVASDLLVEMMGRGHT---- 1185
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P+++ + A++ L V ++M FPD YN++ L
Sbjct: 1186 -----------PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1234
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + +N EM++ QP AT I + ++ A +I+ ++ G+ P
Sbjct: 1235 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1294
Query: 208 SANVLLVGLRNLGRLSDV 225
S N ++ G G +S+
Sbjct: 1295 SCNAMIKGYCQFGMMSEA 1312
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 59/144 (40%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +P+++ YN ++ C D+ +M +G P +TY + L K +
Sbjct: 1006 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLE 1065
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + F EM K + P + I L + A+ I + +G P + N L+
Sbjct: 1066 KIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLI 1125
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
GL + G + F E + R +
Sbjct: 1126 TGLCHEGHVRKAEHFLREAIRREL 1149
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 2/183 (1%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
M+ P ++ +++ +D L +T + + M G + P++I +N ++ LC+
Sbjct: 1074 MRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCD--PDIITFNTLITGLCHE 1131
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
V F + + P+ L+Y + ++ + EM+ P +
Sbjct: 1132 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTF 1191
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
I L+ A + A+ + + E + P NVL+ GL L + EEML
Sbjct: 1192 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1251
Query: 235 RRI 237
+ +
Sbjct: 1252 KNV 1254
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + N+ +A K F E +E P+ +++ + + + EA+ + M+ C
Sbjct: 1267 GFIRSENLGDARKIF-EFMEHKGVCPD-IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ + K + ++ L D+ I PN++ Y++++ C D D+
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDM---IKRKCKPNVVTYSSLINGYCKTGDTDS 1381
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M P+ +TY ++ L K KV +F M+ N P
Sbjct: 1382 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 1431
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 4/242 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA +M ER + P+ V Y + L + + + A L M +N P
Sbjct: 1202 GKVSEALIVREKMTER-QVFPD-VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF 1259
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D ++ + ++++ M G + P+++ NA++ C +
Sbjct: 1260 VYATLIDGFIRSENLGDARKIFEFMEHKG--VCPDIVSCNAMIKGYCQFGMMSEAILCMS 1317
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G PD TY + K ++ + +MIK + +P + ++ I
Sbjct: 1318 NMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTG 1377
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ + A ++ + + P + +L+ L ++ + E ML DVT+
Sbjct: 1378 DTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLH 1437
Query: 246 KL 247
L
Sbjct: 1438 YL 1439
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ +A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDKAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L ++ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 8/191 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK---LNDSTHTVQ 85
V ++ + L +VDE + +MK F + K +N S H ++
Sbjct: 59 VSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLE 118
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ + G+ + Y+A++ LC ++D + M+ G P++ YN +
Sbjct: 119 MAEQKGGV-----LDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLING 173
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L+ K + F EM PT + T I L + A + +L+ G+ P
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPG 233
Query: 206 EASANVLLVGL 216
+ ++L+ GL
Sbjct: 234 VITYSMLMKGL 244
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G ++A +M+ R + P H + + + Q+D A + ++M C P
Sbjct: 219 KSGKYIDAF-NLAQMMLRRDCKPSH-FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 276
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + + N QL + M G P+++ YN++V LC + VD +
Sbjct: 277 IYTYNIMISGACRANRIDDARQLLERMTEAG--CPPDVVTYNSIVSGLCKASQVDEAYEV 334
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ + G F D +T + + + L K++++ + E EM +N P + I
Sbjct: 335 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 394
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
AD+ + ++ ++ +L+ G +P + ++++ L R+ D + ML R +
Sbjct: 395 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L + ++ +A L M C P + ++ ++ KL + V L++
Sbjct: 102 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 161
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + + P++ YN ++ C + + +MV +G P+ +TYN + + L+K
Sbjct: 162 QM--LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K + N M++ + +P+ I M + + A E++ + + G LP +
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N+++ G R+ D R+ E M
Sbjct: 280 YNIMISGACRANRIDDARQLLERM 303
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 7/221 (3%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
L +R K+ EA + C P +S ++ K D +L D M
Sbjct: 3 CLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR 62
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G ++P+ +YN ++ LC+N VD+ + M H A P +TY ++ + L K+ ++
Sbjct: 63 G--IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSARIS 119
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ +MI+ P + T I + A+ ++N +LEN P + N+L+
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
G R D + +EM+ + Y+ M L K+
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKS 220
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A + EM+ER + +P+ V+ Y + ++ + EA + M
Sbjct: 299 GFCSSGRWSDAEQLLQEMLER-KISPD-VVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D K N ++ +M G + PNLI +N ++ C +D+
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDG 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D+ TYN + ++ + EMI + P + C T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 181 LLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRFA 229
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ +T + +SR FDS+ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG++ + +P+ V+ + T L L +V EAL M C P + F+
Sbjct: 133 ALSTFGKLT-KLGLHPD-VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M V
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 5/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E E + EM+ P + ++ I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 YDVTMQKLKKAFY 252
T L FY
Sbjct: 429 DTTTYNTLIHGFY 441
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TY+ + + K ++ E+ F+ M P + T I
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + E G++ + N L+ G +G L+ +EM++ +
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
VT L + + ++D + + K+ +
Sbjct: 465 IVTCDTLLDGLCDNGK-LKDALEMFKVMQKSKK 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILV--- 75
E ++A T TLI G ++ AL L+ M P + LD L
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 76 KLNDSTHTVQLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
KL D+ ++ D+ FN + P++ YN ++ L N +++M
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+ + + L K ++ E F M + P + T I A +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+E++ + GI+ + L+ G R +G ++ +EM++ + +T++ +
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 250 AFYNESRSMR 259
+++ R
Sbjct: 660 GLWSKEELKR 669
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ ++ C+ + + F ++ G PD +T+N + L +V E N FH+M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ +D L K + Q++D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ + ++ C VD+ F +M G +++TY + K
Sbjct: 571 SMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ ++ A + F M+ + +V Y + L EAL LR M+G C P
Sbjct: 167 SDASLTSARRFFDSMLS--DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPN 224
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + + + +L +M G L PNL+ +N++V +C +++ +
Sbjct: 225 VVTYNTLVAAFFRAGEVDGAERLVGMMREGG--LKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+MV G PD ++YN + K HE + F EM + P + + I ++
Sbjct: 283 FDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 342
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A E A+ + + E G+ E + L+ G G L D M RI
Sbjct: 343 AGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRI 396
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ A +M ER E + + + + +D+AL +R MK P+
Sbjct: 342 KAGNLERAVTLVRQMRERGLQMNE--VTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS 399
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ + +L M G L P+++ Y+ ++ C N D + F
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKG--LKPDVVTYSTIISAYCKNCDTHSAFEL 457
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ G PD++TY+ + L K++ + F MIK QP + I
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI---- 239
E A+ + + +++ G+LP + +VL+ GL R + ++ ++ + +
Sbjct: 518 EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK 577
Query: 240 YDVTMQKLKKA 250
YD M +KA
Sbjct: 578 YDALMHCCRKA 588
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 8/232 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VLAY L+ L + A +F M + P + ++ + L + +
Sbjct: 156 VLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G PN++ YN +V +VD R M G P+ +T+N + + K
Sbjct: 215 DMRGAGCG--PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + F EM++ P ++ T + A A+ ++ + + GI+P +
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL-----KKAFYNES 255
L+ + G L +M R + + +VT L KK F +++
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A + EM+ER + +P+ V+ Y + ++ + EA + M
Sbjct: 299 GFCSSGRWSDAEQLLQEMLER-KISPD-VVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D K N ++ +M G + PNLI +N ++ C +D+
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDG 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D+ TYN + ++ + EMI + P + C T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 181 LLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRFA 229
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ +T + +SR FDS+ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + +P+ V+ + T L L +V EAL M C P + F+
Sbjct: 133 ALSTFGK-ITKLGLHPD-VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M V
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 5/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E E + EM+ P + ++ I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 YDVTMQKLKKAFY 252
T L FY
Sbjct: 429 DTTTYNTLIHGFY 441
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TY+ + + K ++ E+ F+ M P + T I
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + E G++ + N L+ G +G L+ +EM++ +
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
VT L + + ++D + + K+ +
Sbjct: 465 IVTCDTLLDGLCDNGK-LKDALEMFKVMQKSKK 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILV--- 75
E ++A T TLI G ++ AL L+ M P + LD L
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 76 KLNDSTHTVQLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
KL D+ ++ D+ FN + P++ YN ++ L N +++M
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+ + + L K ++ E F M + P + T I A +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+E++ + GI+ + L+ G R +G ++ +EM++ + +T++ +
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 250 AFYNESRSMR 259
+++ R
Sbjct: 660 GLWSKEELKR 669
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ ++ C+ + + F ++ G PD +T+N + L +V E N FH+M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ +D L K + Q++D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ + ++ C VD+ F +M G +++TY + K
Sbjct: 571 SMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A + EM+ER + +P+ V+ Y + ++ + EA + M
Sbjct: 299 GFCSSGRWSDAEQLLQEMLER-KISPD-VVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D K N ++ +M G + PNLI +N ++ C +D+
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDG 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D+ TYN + ++ + EMI + P + C T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 181 LLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRFA 229
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ +T + +SR FDS+ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + +P+ V+ + T L L +V EAL F M C P + F+
Sbjct: 133 ALSTFGK-ITKLGLHPD-VVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M V
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 5/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E E + EM+ P + ++ I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 YDVTMQKLKKAFY 252
T L FY
Sbjct: 429 DTTTYNTLIHGFY 441
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TY+ + + K ++ E+ F+ M P + T I
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + E G++ + N L+ G +G L+ +EM++ +
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
VT L + + ++D + + K+ +
Sbjct: 465 IVTCDTLLDGLCDNGK-LKDALEMFKVMQKSKK 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILV--- 75
E ++A T TLI G ++ AL L+ M P + LD L
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 76 KLNDSTHTVQLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
KL D+ ++ D+ FN + P++ YN ++ L N +++M
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+ + + L K ++ E F M + P + T I A +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+E++ + GI+ + L+ G R +G ++ +EM++ + +T++ +
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 250 AFYNESRSMR 259
+++ R
Sbjct: 660 GLWSKEELKR 669
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ C+ + + F ++ G PD +T+ + L +V E +FFH+M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ +D L K + Q++D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ + ++ C VD+ F +M G +++TY + K
Sbjct: 571 SMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KEGEMRLAQMVF-DAITKWSLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + ++ + M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDEANEMLNEMLDNG--LVPNGVTFTTLIDGHCKNGKVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD +TYN + L + + + + EMI +P + T I
Sbjct: 264 YKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E E+ ++ I E + L+ GL GR D + EML
Sbjct: 324 EGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLT 374
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L FF+ + K + ++D + ++L P+++ +N ++ D+D F
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITK--WSLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R M G PD TY+++ L K K+ E +EM+ N P + T I
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + A+EI+ +L G LP + N L+ GL G L R EEM+
Sbjct: 252 CKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A + + +M+ + + P+ ++ Y T + L R + +A + M +
Sbjct: 250 GHCKNGKVDLAMEIYKQMLSQ-GFLPD-LITYNTLIYGLCRRGDLGQARDLVEEMIMKGL 307
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K D T +L M I N+ + + Y A++ LC +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLEITFELRKRM--IRENIRLDEVTYTALISGLCREGRAGDA 365
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+ +M+ G PD+ TY MI K V EM +N P P
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRN--GPVP 414
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
+EA+K +MK P++ F++ L IL+K + ++D M G + + P+ +N
Sbjct: 114 NEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT-YGVTPDTYTFN 172
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK- 164
++ C N+ VD FRFF +M PD +TYN + + L + KV N M+K
Sbjct: 173 ILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKK 232
Query: 165 -NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ P + T + E + A+ ++ ++ G+ P + + N L+ GL + +
Sbjct: 233 MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFD 292
Query: 224 DVRRFAEEMLNRRILIYDV 242
++ + R + D
Sbjct: 293 KIKEILGGAVGGRGFVPDT 311
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 14/237 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGEN 59
K G A+ F EM + P+ TF I LIRG VDE +F + M N
Sbjct: 144 KRGRTNMAHSVFDEMCGTYGVTPDTY----TFNI-LIRGFCKNSMVDEGFRFFKEMSRFN 198
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ +D L + + MV +L P+++ Y +V C ++D
Sbjct: 199 CEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDE 258
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAI 178
F++MV G P+ +TYN + + L + +K +++ + + P T +
Sbjct: 259 ALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLM 318
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
DA + A++++ + E + P A+ +VL +RNL + D R AE++ ++
Sbjct: 319 NAQCDAGNFDEALKMFKKMKELKVQPDSATYSVL---IRNLCQRGDFER-AEQLFDK 371
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 43/213 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V A+ MV++ + V+ Y T + +++DEAL M
Sbjct: 212 GLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 271
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L ++ ++ VG G +P+ YN ++ C+ + D
Sbjct: 272 KPNDITYNTLIKGLCEVQKFDKIKEILGGAVG-GRGFVPDTCTYNTLMNAQCDAGNFDEA 330
Query: 121 FRFFDQMVFHGAFPDSLTY----------------------------------------- 139
+ F +M PDS TY
Sbjct: 331 LKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAA 390
Query: 140 -NMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
N IF+ L KN K H+ E F +++K Q P
Sbjct: 391 YNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPP 423
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A + EM+ER + +P+ V+ Y + ++ + EA + M
Sbjct: 299 GFCSSGRWSDAEQLLQEMLER-KISPD-VVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D K N ++ +M G + PNLI +N ++ C +D+
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDG 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D+ TYN + ++ + EMI + P + C T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 181 LLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRFA 229
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ +T + +SR FDS+ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + +P+ V+ + T L L +V EAL M C P + F+
Sbjct: 133 ALSTFGK-ITKLGLHPD-VVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M V
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 5/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E E + EM+ P + ++ I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 YDVTMQKLKKAFY 252
T L FY
Sbjct: 429 DTTTYNTLIHGFY 441
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TY+ + + K ++ E+ F+ M P + T I
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + E G++ + N L+ G +G L+ +EM++ +
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
VT L + + ++D + + K+ +
Sbjct: 465 IVTCDTLLDGLCDNGK-LKDALEMFKVMQKSKK 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILV--- 75
E ++A T TLI G ++ AL L+ M P + LD L
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 76 KLNDSTHTVQLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
KL D+ ++ D+ FN + P++ YN ++ L N +++M
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+ + + L K ++ E F M + P + T I A +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+E++ + GI+ + L+ G R +G ++ +EM++ + +T++ +
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 250 AFYNESRSMR 259
+++ R
Sbjct: 660 GLWSKEELKR 669
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ C+ + + F ++ G PD +T+ + L +V E N FH+M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ +D L K + Q++D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ + ++ C VD+ F +M G +++TY + K
Sbjct: 571 SMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 9/233 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +AN+ E VE FE ++ AY T ++ + DEA L + + C
Sbjct: 174 GVLCKANR-LDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGC 232
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L L K + +++++ M + MPNL YN ++G+LC +V+
Sbjct: 233 IPSVVAYNCILTCLGKKGKTDKALRIFEEM---KRDAMPNLPTYNIIIGMLCKAGNVEAA 289
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ D M G FP+ T N++ + L K +K+ E + F M P + I
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A I+ +L+ +P L+ R D + +EM+
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+ + ++ +++ EA L++M+ P ++ + L ++ +S + L++ M +G
Sbjct: 32 LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + N+ + ++ + VD D+M + D + YN+ +C K KV
Sbjct: 92 YEV--NVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDM 149
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FFHEM N P + + + +L A+ + A+EI+ + +N +P + N +++
Sbjct: 150 AWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIM 209
Query: 215 GLRNLGRLSDVRRFAE 230
G + G+ + E
Sbjct: 210 GYGSAGKFDEAYSLLE 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V +A + + M++ + +V+ Y + + + + ++ K + M C
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQI--PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGC 406
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + +D + K ++ L++ + GF +P+ Y+ ++ L
Sbjct: 407 SPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGF--LPDTRSYSILIHSLVKAGFARET 464
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M G D+ YN + + K+ KV++ EM PT + + +
Sbjct: 465 YELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDG 524
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ NGI + + L+ G +GR+ + EEM+ +
Sbjct: 525 LAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 8/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH--VLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G+ K G V NK + +++E + H V+ Y + + L + ++DEA K
Sbjct: 489 GFCKSGKV---NKAY-QLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN 544
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+S+ +D K+ + + M+ G L PN+ +N ++ L +++
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG--LTPNVYTWNCLLDGLVKAEEIN 602
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M P+ +TY ++ L K +K ++ F+ EM K +P + I
Sbjct: 603 EALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ L + A ++ +G +P AS N ++ GL R D + EE +
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722
Query: 239 IYDVTMQKLKKAFYN 253
I+ T L A +
Sbjct: 723 IHTKTCVALLDALHK 737
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T + L + + + LR ++G + P + ++ + L K L+
Sbjct: 199 VSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSE 258
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G + PN+ YN ++ C ++ F ++M PD T+N++ + L K
Sbjct: 259 MIVKGIS--PNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ E + F EM P + + I L E AI + + E GI P S
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKA 250
+LL L GRL + ++F + +L + + Y+V + L KA
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 421
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 4/203 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ EA EM + NP+ V + + L + ++DEA+ MK +N
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLK-NINPD-VYTFNILIDALGKEGKIDEAISLFEEMKHKNM 334
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +++ +D L K + + L M G + P++ Y ++ LC ++N
Sbjct: 335 FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG--IQPDVYSYTILLDALCKGGRLENA 392
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF ++ G + TYN++ L K +V + +M P + T I
Sbjct: 393 KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICA 452
Query: 181 LLDADEPEFAIEIWNYILENGIL 203
L + DE + A + ++ G+L
Sbjct: 453 LFEKDENDKAEKFLREMIARGLL 475
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 12/200 (6%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P F N L LVK + L+ G + PNL N ++ C+ + F
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNG--VTPNLCTLNILINCFCHLAHITFAF 148
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F ++ G PD++T N + + L ++ F +++ +Q ++ T I L
Sbjct: 149 SVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGL 208
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI---- 237
A E + + + + + P ++ L R+ D EM+ + I
Sbjct: 209 CKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNV 268
Query: 238 -----LIYD-VTMQKLKKAF 251
LIY M LK+AF
Sbjct: 269 FTYNTLIYGFCIMGNLKEAF 288
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L L + + +A++ + +M G P +++ ++ L K + + +QL + M G G
Sbjct: 105 LLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHG 164
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F N + YN +V LC + +++ + D++ G P++ TY+ + E K + V E
Sbjct: 165 FPT--NTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDE 222
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
++I +P ++ +T L E AI+++ + G P S N+LL
Sbjct: 223 AMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLR 282
Query: 215 GLRNLGRLSDVRRFAEEM 232
L GR + EM
Sbjct: 283 SLCYEGRWEEANELLAEM 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
K GNV A ++VE+ E + P + + Y T + L ++++L+ L + +
Sbjct: 146 KRGNVGYAI----QLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLI 201
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P +S L+ K ++L D ++ G PNL+ YN ++ LC +
Sbjct: 202 PNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGE--PNLVSYNVLLTGLCKEGRTEEAI 259
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ F ++ G P +++N++ L + E EM K + P+ + IT L
Sbjct: 260 KLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSL 319
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
E A ++ + + +G S N ++ L G++ V + ++M++RR
Sbjct: 320 SLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 41 RGKQ--VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
+GK+ + +A L + G+ P + + L L K N + V++ ++MVG G ++
Sbjct: 74 KGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSG--II 131
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y +V LC +V + ++M HG +++TYN + + L + +++
Sbjct: 132 PDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQL 191
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILPLEASANVLLV 214
+ K P A + LL+A E A+++ + I+ G P S NVLL
Sbjct: 192 LDRLTKKGLIPN----AFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLT 247
Query: 215 GLRNLGRLSDVRRFAEEM 232
GL GR + + +E+
Sbjct: 248 GLCKEGRTEEAIKLFQEL 265
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L + +VD LK L M C P +S + L++ + + I+
Sbjct: 346 SYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYS----AISMLSEQGKVQEAFFII 401
Query: 91 VGIGFNL-MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+G P Y ++ LC + F+ +M +G PDS TY+ + + +
Sbjct: 402 QSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCRE 461
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E F + +N+ +P N I A + +IEI+ ++ G +P E +
Sbjct: 462 GMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTY 521
Query: 210 NVLLVGL 216
+L+ GL
Sbjct: 522 TILVEGL 528
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 5/178 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V EA K +++ + ++++Y L L + + +EA+K + + + P+
Sbjct: 216 KERGVDEAMKLLDDIIAK--GGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPS 273
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ L L +L M + P+++ YN ++ L N + F+
Sbjct: 274 VVSFNILLRSLCYEGRWEEANELLAEM--DKEDQPPSVVTYNILITSLSLNGRTEQAFKV 331
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G + +YN I L K KV V +MI P +AI+ML
Sbjct: 332 LDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNE-GTYSAISML 388
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + V A K F EM + E ++Y + L K++DEAL L MK +NC
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQNGCHRNE--VSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D L + + L+ M G + P+ MY ++ C+ + +D
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG--IKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ +G P+ +TYN + + K K VH+ +M++ P + T I
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ + A + + + E+G++P
Sbjct: 374 QCSSGNLDSAYRLLSLMEESGLVP 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 92/231 (39%), Gaps = 5/231 (2%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+++ P+ Y L +L R V+E + M + P + F+ ++ KL
Sbjct: 115 KYKLTPK---CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
Q ++ G + P+ Y + + C +VD F+ F +M +G + ++Y
Sbjct: 172 VEAKQYVTWLIQAGCD--PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L + KK+ E + +M + P I L + + A+ ++ + E+
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
GI P + VL+ + L + E ML ++ +T L K F
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 12/236 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G VE + F M ++ +V Y + + V+EA+ MKGE
Sbjct: 339 GLCKDGRTVEGSSVFENMNKK--GCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGF 396
Query: 61 FP---TLKFFSNALDILVKLNDSTHTVQLW-DIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P T N L +L+++ + D V + N + Y++++ L
Sbjct: 397 EPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAV------NAMFYSSLIDGLGKAGR 450
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
VD +FF++MV G DS YN + + L K+ K+ E F M K T
Sbjct: 451 VDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTI 510
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I+ L E A+++W+ +++ GI P AS L VGL G+++ + +E+
Sbjct: 511 LISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDEL 566
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 3/227 (1%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
+E+ + E++E + P+ V++Y T + + +A++ M+ N P +
Sbjct: 241 IESAERVFEVMECGKIGPD-VVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYL 299
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ + + L+ M G + P+ Y+ V+G LC + F+ M
Sbjct: 300 TLIQACYSEGNFDSCLHLYQEMEERGLEIPPH--AYSLVIGGLCKDGRTVEGSSVFENMN 357
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G + Y + + KN V+E N F M ++P + + L + +
Sbjct: 358 KKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLD 417
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A+E + + +N + + L+ GL GR+ + +F EEM+ R
Sbjct: 418 EAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVER 464
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 17/281 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A + EM+ER + +P+ V+ Y + ++ + EA + M
Sbjct: 299 GFCSSGRWSDAEQLLQEMLER-KISPD-VVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ +D K N ++ +M G + PNLI +N ++ C +D+
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDG 414
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G D+ TYN + ++ + EMI + P + C T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 181 LLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRRFA 229
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 230 EEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R I+ +T + +SR FDS+ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + +P+ V+ + T L L +V EAL M C P + F+
Sbjct: 133 ALSTFGK-ITKLGLHPD-VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEI 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 5/253 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKIGDTVSALDLLRKMEEISH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E E + EM+ P + ++ I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 YDVTMQKLKKAFY 252
T L FY
Sbjct: 429 DTTTYNTLIHGFY 441
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 112/273 (41%), Gaps = 4/273 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKIGDTVSALDLLRKMEEISHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TY+ + + K ++ E+ F+ M P + T I
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + E G++ + N L+ G +G L+ +EM++ +
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKTSQ 273
VT L + + ++D + + K+ +
Sbjct: 465 IVTCDTLLDGLCDNGK-LKDALEMFKVMQKSKK 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILV--- 75
E ++A T TLI G ++ AL L+ M P + LD L
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 76 KLNDSTHTVQLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
KL D+ ++ D+ FN + P++ YN ++ L N +++M
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+ + + L K ++ E F M + P + T I A +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+E++ + GI+ + L+ G R +G ++ +EM++ + +T++ +
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 250 AFYNESRSMR 259
+++ R
Sbjct: 660 GLWSKEELKR 669
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 7/212 (3%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ ++ C+ + + F ++ G PD +T+N + L +V E N FH+M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG-- 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ +G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 221 -RLSDVRRFAEEMLN--RRILIYDVTMQKLKK 249
D+ R EE+ + ++IY + L K
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCK 267
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +S+ +D L K + Q++D
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ + ++ C VD+ F +M G +++TY + K
Sbjct: 571 SMGSKSFS--PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T L +E + A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 1 GWEKEG-NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-- 57
GW K+ NVVEA FG FE + + Y L + +VDEA K M+
Sbjct: 294 GWIKQATNVVEAMTAFG-----FEPD---LWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345
Query: 58 -------------ENCFPTLKFFSNALDILVKLNDS-------THTV---------QLWD 88
+ CF + S+AL++L ++ D TH + QL +
Sbjct: 346 IVSPDVVTYNTLVDACF-KYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404
Query: 89 IMVGIGF----NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+ + L P++I YN ++ C +V F D+MV G D+ T N +
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 464
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K K+ E E + + P ++ T + ++PE A+ +W+ + + + P
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ N L+ GL +G+L++ E++ + ++ D T + A+ E
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T L L + K+ +EA + LR P + + K N + LWD M
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSK- 519
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
L P++ YN ++ LC + ++++ G PD TYN+I K +
Sbjct: 520 -RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLE 578
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ F ++M++N ++P + C T + L + E AI+++ E G + N L+
Sbjct: 579 KAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLI 638
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKAFYN-ESRSMRDRFD 263
L G + F +M R + Y+V + L +A + E+++M + D
Sbjct: 639 QALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLD 693
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 1/197 (0%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L+ + L L + ++ L I L PN +N +V C+ + +
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
M G PD +TYN + + + + E M K PT T ++
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A + + G P + NVL GL G++ + + +EM + I+ D
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350
Query: 242 -VTMQKLKKAFYNESRS 257
VT L A + RS
Sbjct: 351 VVTYNTLVDACFKYQRS 367
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
LIRG ++ + L M+ C P + ++ +D K+ L M G
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ PNLI YN ++ LC + + ++M + G PD +TYN + K H+
Sbjct: 76 --MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 133
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
EM++N P+ + I + A A+E ++ + G+ P E + L+
Sbjct: 134 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 193
Query: 215 GLRNLGRLSDVRRFAEEM 232
G G L++ R EM
Sbjct: 194 GFSRQGLLNEAYRILNEM 211
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 25/264 (9%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA EMVE+ P+ V++Y T + R ++D A + + M + P +S+
Sbjct: 238 EALGVVQEMVEK-GLAPD-VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L ++ T L M+ +G L P+ Y ++ C D++ D+M+
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMG--LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+++ L K + E + ++I E P+ + T T++ + EF
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV---TYDTLIENCSNIEF 410
Query: 190 ------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
A ++ ++E P EA NV++ G G L +E
Sbjct: 411 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 470
Query: 232 MLNRRILIYDVTMQKLKKAFYNES 255
M++ + + VT+ L KA + E
Sbjct: 471 MIHSGFVPHTVTVITLIKALFKEG 494
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN +A EMV R +P V+ Y + ++ + + ++ A++F M+
Sbjct: 124 GYCKEGNFHQALVIHAEMV-RNGVSPS-VVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + ++ +D + ++ + M GF+
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L P+++ Y+ ++ C ++D F+ +MV G PD++TY+ + + L
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +++ E + EM+ P T I + A+ + + ++ G LP
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ +VL+ GL R + +R +++ + DVT L
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG++ EA + EM + + P+ V Y T L + +AL M
Sbjct: 89 GLCREGSMKEAWEILEEMGYK-GFTPDEV-TYNTLLNGYCKEGNFHQALVIHAEMVRNGV 146
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ ++ + K + ++ +D M G L PN Y ++ ++
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG--LRPNERTYTTLIDGFSRQGLLNEA 204
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R ++M G P +TYN +++ E EM++ P ++ +T I+
Sbjct: 205 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 264
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E + A ++ ++E G+ P + + L+ GL + RL++ ++EML+ +
Sbjct: 265 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPD 324
Query: 241 DVTMQKLKKAFYNES 255
+ T L A+ E
Sbjct: 325 EFTYTTLINAYCVEG 339
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+ YN ++ C+ ++ F +M +G P+ +TYN + + K ++ E
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M QP ++ I L + A EI + G P E + N LL G
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
G EM ++ ++ Y + + KA N +R+M + FD + R
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA-RNLNRAM-EFFDQMRIR 179
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
GNV +A + F M +R + Y T + L ++DEA+ L M+ E FP
Sbjct: 189 GNVDQAVEVFRGMSDRNCVADGYT--YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 246
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
F+ + L K D + +L D M G +PN + YN++V LC +D +
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKG--CVPNEVTYNSLVHGLCLKGKLDKAMSLLN 304
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV + P+ +T+ + + +K+ + + + + ++ + ++ I+ L
Sbjct: 305 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 364
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ E +++W ++E G P + L+ GL G+ + + + EM N+
Sbjct: 365 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 414
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 3/215 (1%)
Query: 47 EALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF--NLMPNLIM 103
+AL M E +C T+K F+ L+++++ ++ ++ ++ N+ PN +
Sbjct: 118 KALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLS 177
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+N V+ LC +VD F M D TY+ + L ++ E + EM
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
P P+ I+ L + A ++ + + G +P E + N L+ GL G+L
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
M+ + + D+T L F R++
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 332
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A+K M + P V Y + + L ++D+A+ L M C P
Sbjct: 257 KKGDLSRASKLVDNMFLK-GCVPNEV-TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPN 314
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F +D VK + V++ + G+ N Y++++ L ++ +
Sbjct: 315 DITFGTLVDGFVKHGRALDGVRVLVSLEEKGYR--GNEFSYSSLISGLFKEGKGEHGMQL 372
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +MV G P+++ Y+ + + L + K E + + EM P ++ + +
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 432
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + AI +W + +N E ++L+ GL G+L + ++ML+R I + V
Sbjct: 433 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492
Query: 244 MQKLKKAFYN 253
+ F N
Sbjct: 493 YSSMIHGFCN 502
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + + EMVE+ + + Y + L R + DEA ++L MK +
Sbjct: 359 GLFKEGKGEHGMQLWKEMVEK--GCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S+ + + D + +W M N + + Y+ ++ LC N +
Sbjct: 417 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN--HHEVCYSILINGLCKNGKLKEA 474
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN--EWQPTPLNCATAI 178
+ QM+ G D + Y+ + + V + F++M+ + + QP + +
Sbjct: 475 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 534
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLSDVRRFAEEMLNRRI 237
+ AI+I N +L+ G P + ++ L LR N+ D R F +E++ R I
Sbjct: 535 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLI 594
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANXLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EMI P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EMLN
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLN 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 XLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKL 247
L + +EM+ + + +T L
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTL 317
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A +M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALSVLNDMIKSGCKPNVHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHRVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NHWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 104/256 (40%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F + +D++L L + + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGF-----------------CKNGYIDKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + + + + M+ G PN+ +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCK--PNVHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L KN+ E N E++ P + + +
Sbjct: 183 AIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L E A+++WN + G P N+L+ GL ++G++ +M + +
Sbjct: 243 GLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
V+ L + FY +
Sbjct: 303 NLVSHNTLMEGFYKDG 318
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 8/265 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A + F ++V R E + +VL Y + R +++ A L MK +
Sbjct: 319 GLCKKGWTEKAFRLFLKLV-RSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + L ++M GF+ PNL YNA+V LC V
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFS--PNLCTYNAIVNGLCKRGRVQEA 435
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ + +G PD TYN++ K + + + F++M+K QP + T I +
Sbjct: 436 YKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAV 495
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
+ + + + + GI+P + ++ G G L+ +F + +
Sbjct: 496 FCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPD 555
Query: 238 -LIYDVTMQKL-KKAFYNESRSMRD 260
+ Y + L K++ +E+RS+ D
Sbjct: 556 SITYGAIISGLCKQSKRDEARSLYD 580
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 11/234 (4%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIR--GKQ-VDEALKFLRVMKGE 58
+ K GN++EA+K M+ER V+ TF + + R GK AL + R +
Sbjct: 215 YCKIGNILEADKWLSVMLER-----GFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDM 269
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P L F+ ++ L K ++ + MVG G+ PN+ + +++ LC +
Sbjct: 270 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWK--PNVYTHTSLIDGLCKKGWTE 327
Query: 119 NVFRFFDQMV-FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
FR F ++V P+ LTY + + K++ E M + P T
Sbjct: 328 KAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
I A E A ++ N + G P + N ++ GL GR+ + + E+
Sbjct: 388 IDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 441
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA K + + P+ Y + + + + +AL M
Sbjct: 425 GLCKRGRVQEAYKMLEDGFQN-GLKPDK-FTYNILMSEHCKQENIRQALALFNKMLKIGI 482
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + + + N + ++ V IG ++P Y +++ C ++
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG--IIPTNKTYTSMICGYCREGNLTLA 540
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF ++ HG PDS+TY I L K K E + + MI+ P + T IT+
Sbjct: 541 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEV---TRITL 597
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKG-ENCFPTLKFFSNAL-DILVKLNDSTHTVQL 86
+ Y + L + +V EA K L G +N KF N L K + + L
Sbjct: 416 LCTYNAIVNGLCKRGRVQEAYKMLE--DGFQNGLKPDKFTYNILMSEHCKQENIRQALAL 473
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ M+ IG + P++ Y ++ + C N + FF++ V G P + TY +
Sbjct: 474 FNKMLKIG--IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGY 531
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ + FFH + + P + I+ L + + A +++ ++E G++P E
Sbjct: 532 CREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCE 591
Query: 207 AS 208
+
Sbjct: 592 VT 593
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 17/222 (7%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KG---ENC 60
G V A F EM R P+ + +Y ++ + + EA K+L VM +G +N
Sbjct: 184 GLVEYAELLFEEMCVR-GVQPDSI-SYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNA 241
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
TL I+ + + +T + LW + L PNLI + ++ LC +
Sbjct: 242 TFTL--------IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQ 293
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE-WQPTPLNCATAI 178
F ++MV G P+ T+ + + L K + F +++++E +P L I
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMI 353
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ D+ A + + + E G++P + L+ G G
Sbjct: 354 SGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAG 395
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCFPTLKFFSNALDI 73
M+ER + E + E +++ RG +V L +RV M+G PT K + LDI
Sbjct: 72 MLERMKQ--EKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND-VDNVFRFFDQMVFHGA 132
LV+ N + + M +G + +++ N ++ LC N + VD+ R F +M G
Sbjct: 130 LVEENHVKRAIGFYREMRELG--IPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGC 187
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PDS TY + L + + E + F EM + + + + + I L ++ + AI
Sbjct: 188 QPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIG 247
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+ + N I P + + L+ GL G S + E M + L VT L
Sbjct: 248 LLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLC 307
Query: 253 NESRSMRDRFDSLER 267
E R +R+ + L+R
Sbjct: 308 KE-RKLREAVEILDR 321
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + GN+ EA + F EM ++ V+ Y + + L + +DEA+ L MK +
Sbjct: 200 GLCRLGNISEAKELFKEMEQK--GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDI 257
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K S+ +QL ++M + +PN++ Y+ ++ LC +
Sbjct: 258 EPNVFTYSSLMDGLCKGGHSSQAMQLLEVM--DKKHHLPNMVTYSTLINGLCKERKLREA 315
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D+M G P++ Y I L E NF EM+ P
Sbjct: 316 VEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISP 364
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 26 PEHVLAYETFLITLIRGKQ-VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
P V++ + L + K+ VD AL+ + M C P + ++ L +L + +
Sbjct: 152 PSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAK 211
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+L+ M GF+ +++ Y +++ LC +N++D ++M + P+ TY+ + +
Sbjct: 212 ELFKEMEQKGFS--ASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMD 269
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K + M K P + +T I L + A+EI + + G+ P
Sbjct: 270 GLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKP 329
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ GL G + F +EM+
Sbjct: 330 NAGLYGKIISGLCAAGSYQEAANFIDEMV 358
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 7/174 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ +A + E++++ P +++ Y T + L + +++ EA++ L M+ +
Sbjct: 270 GLCKGGHSSQAMQLL-EVMDKKHHLP-NMVTYSTLINGLCKERKLREAVEILDRMRIQGL 327
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMP---NLIMYNAVVGLLCNNN 115
P + + L D MV GI N ++ M+N VV LCNN
Sbjct: 328 KPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNV 387
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D F+ + M + T++ + +C K +H+ EM+ + P
Sbjct: 388 DPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIP 441
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
YE + +L + ++D A K + MK P+ FS+ +D + K +++++ M
Sbjct: 312 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 371
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G P+ M+ +++ +D R +D+M G P+ Y MI E K+ K
Sbjct: 372 GFGHR--PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 429
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F +M K + PTP + + M + + + A++I+N + G+ P +S
Sbjct: 430 LEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 489
Query: 212 LLVGLRNLGRLSDV 225
LL L N RL DV
Sbjct: 490 LLTLLAN-KRLVDV 502
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ +A +M++ HV Y T + L+ + ++A++ R M C
Sbjct: 138 GLCKEANLDKAVXVLNDMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGXVRC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L M+ G N P++I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLN--PSVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ G PD +N++ L K + + +M N W+ P N T T+
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDM--NRWKCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW L NG+ P S N+ L GL + R+ D F + + ++
Sbjct: 311 MEGFYKDGDIRN-ALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKK 369
Query: 237 ILIYDVT 243
I+ +T
Sbjct: 370 IVPTKIT 376
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE K+ + VE + TFG +V F + ++++L L + + +
Sbjct: 82 WELMKKSDFVEDSITFGILVHGF-----------------CKNGYINKSLHVLEMAZXKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + V + + M+ G PN +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCK--PNAHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L KN+ E + +M++ P+ + + +
Sbjct: 183 AIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN ++ G P N+L+ GL ++G+ +M +
Sbjct: 243 GLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
VT L + FY +
Sbjct: 303 NLVTHNTLMEGFYKDG 318
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ KEG ++EA K F EM++R +P +++ Y + + ++DEA + +M ++C
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQR-SIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ K ++L+ M G L+ N + Y ++ +D DN
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG--LVGNTVTYTTLIHGFFQASDCDNA 434
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QMV G P+ +TYN + + L KN K+ + F + K++ +P
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ A + E +++ + G+ P + N ++ G G
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+FGE +E + ++ Y + L R Q+ AL L M P++ ++ L+
Sbjct: 86 SFGEKMEILGVS-HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNG 144
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
N + V L D MV +G+ P+ + + +V L +N ++MV G
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQ--PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY + L K + N ++M K + + + +T I L + A+ +
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + GI P + + L+ L N GR SD R +ML R+I VT L AF
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 254 ESR 256
E +
Sbjct: 323 EGK 325
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
G+M+ + + P ++ + L G ++ EA+ + M P F+ + L
Sbjct: 123 LGKMM-KLGYGPS-IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+ N ++ V L + MV G P+L+ Y AV+ LC + D ++M
Sbjct: 181 FQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D + Y+ + + L K + V + N F EM +P ++ I+ L + A +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+ +LE I P + N L+ G+L + + +EM+ R I VT L F
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF--- 355
Query: 255 SRSMRDRFDSLER 267
M DR D ++
Sbjct: 356 --CMHDRLDEAQQ 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + L + +A + L M P + F++ +D K +L+D
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + PN++ YN+++ C ++ +D + F MV PD +TYN + K
Sbjct: 335 EMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
KKV + F +M + + T I A + + A ++ ++ +G+ P +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 209 ANVLLVGLRNLGRL 222
N LL GL G+L
Sbjct: 453 YNTLLDGLCKNGKL 466
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 2/227 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + + D AL L M+ + +S +D L K + L+
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + P++ Y++++ LCN + R M+ P+ +T+N + + K
Sbjct: 265 EMDNKG--IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E F EMI+ P + + I D + A +I+ ++ LP +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N L+ G ++ D +M R ++ VT L F+ S
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 12/166 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL---KFLRVMKG 57
G+ + + A F +MV + +++ Y T L L + ++++A+ ++L+ K
Sbjct: 424 GFFQASDCDNAQMVFKQMVS--DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNND 116
E T S + K+ D WD+ + + P++I YN ++ C
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDG------WDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ + F +M G PDS TYN + +++ EM
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/135 (17%), Positives = 58/135 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ ++ ++ + D V F ++M G + TYN++ CL + ++
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M+K + P+ + + + + A+ + + ++E G P + L+ GL
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 219 LGRLSDVRRFAEEML 233
+ S+ E M+
Sbjct: 183 HNKASEAVALVERMV 197
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 23/242 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G+ K G + A EM +R +P+ Y + L + + +A + L+ M G ++
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPD-TFTYSILINGLCKSSNLRKADELLQEMIGRKD 223
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C ++ F+ +D K D +L M+ G P+++ Y+ ++ LC DVD
Sbjct: 224 CCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG--CAPDVVTYSTIIDGLCRCGDVDK 281
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F ++MV G PD +TY ++ L K K+ E M+++ P + +
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L D+ + AN LL +R+ GR++DV F +L+ + +
Sbjct: 342 GLCKIDKLDM-------------------ANDLLTSIRDKGRVTDVVAFETLLLSVKKRL 382
Query: 240 YD 241
D
Sbjct: 383 LD 384
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA + M + P+ V+ + T + L + ++DEA + L M+
Sbjct: 66 KSGKVPEAMEVVKNMKDG-ACKPD-VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAAN 123
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ ++ L S V +V G P+ YNA++ C + ++D + F
Sbjct: 124 LVTYNTLINGLSSAGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGF 178
Query: 124 FDQMVFH-GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAITML 181
++M G PD+ TY+++ L K+ + + + EMI + + + + T +
Sbjct: 179 LEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGY 238
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----I 237
A + + A E+ + +LE+G P + + ++ GL G + E+M++R +
Sbjct: 239 CKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298
Query: 238 LIYDVTMQKLKKA 250
+ Y V + L KA
Sbjct: 299 VTYTVLVTGLCKA 311
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ P MYN V LC + V M PD +T+N + L K ++ E
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ EM ++ + + T I L A A+ + + P + N ++ G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHG 165
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
G + F EEM R
Sbjct: 166 FCKSGEIDRAYGFLEEMKQR 185
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG V EA EM + + ++ Y + L + ++ + AL+ +M N P+
Sbjct: 512 REGRVEEALNLMNEMQTQGIF--PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S +D K ++S + L+ M+ IG + P+++ Y ++ +LC+ + + +
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALMLYARMLKIG--VTPDMVAYTILINILCHRSRMCEAYNL 627
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M +G PD ++Y + + + + F+EM++ PT + + +
Sbjct: 628 FKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK 687
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A + + + GI P + NVL+ R G L A EMLN
Sbjct: 688 MNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDK----ALEMLN 734
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 113/289 (39%), Gaps = 46/289 (15%)
Query: 5 EGNVVEAN---KTFGEMVERFEWNPEH--VLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
+GN EA+ + E++E E N E V+ Y T++ L R V+ AL F+R + N
Sbjct: 261 KGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISAN 320
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ + L K + +++ + M G + P++ Y+ ++ C DV+
Sbjct: 321 GLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS--PDVYTYSILIHGFCKQGDVEK 378
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNK----------------------------- 150
++M + P ++Y+ +F L K +
Sbjct: 379 GLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIK 438
Query: 151 ------KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ EM++N P P N + + A+E +N +LE GILP
Sbjct: 439 GFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILP 498
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
A+ NV++ GR+ + EM + I Y+ + +L K
Sbjct: 499 SIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCK 547
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ +G++ A+K EMV +P + +E+ + + AL+F +M
Sbjct: 439 GFCMQGDLDSAHKLMEEMVRNNLAPDPSN---FESLVHGFCKMGLWVNALEFFNMMLEGG 495
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P++ + +D + + L + M G + PNL YNAV+ LC +
Sbjct: 496 ILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG--IFPNLFTYNAVINRLCKERKSER 553
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F M+ P + Y+ + + K + + M+K P + I
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+L A ++ + ENG+ P + S ++ G +G + EML R L
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673
Query: 240 YDVTMQKLKKAFYNESR 256
VT L + +R
Sbjct: 674 TVVTYTSLVDGYCKMNR 690
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA K F V+R + P+ V+ Y + + ++DEA + L+ M EN
Sbjct: 54 GFCKVGELDEALKIFDGAVKR-GFVPD-VVTYNALINGFCKADKLDEAQRILQRMVSENL 111
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN-NDVDN 119
P + +++ ++ L K N ++ ++V GF+ PN+I Y+ ++ LC V
Sbjct: 112 VPDVVTYNSLVNGLCK-NGRVDEARM--LIVDKGFS--PNVITYSTLISGLCRELRGVSE 166
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F ++ G P+ TYN++ + L+K +V+E F ++K+ +P + I
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A E A+ + + E G +P S N ++ GL
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 10/231 (4%)
Query: 28 HVLAYETFLITLIRG-KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+V+ Y T + L R + V EALK + + P + ++ +D L+K + +L
Sbjct: 146 NVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFEL 205
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ +V G L P+ I Y + LC V++ M G PD +++N + L
Sbjct: 206 FSGLVKHG--LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K K+V E E M P ++ T I A + + A+ + +L+ G+ P
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323
Query: 207 ASANVLLVGL---RNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
+ N+L+ GL R GR+ + + M+ + ++ Y + L KA
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
V EA K FG ++++ + PE V Y + L++ +V+EA + + P
Sbjct: 163 GVSEALKLFGSVLKQ-GYEPE-VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT 220
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ +D L K + + M G +P+++ +NAV+ LC VD
Sbjct: 221 YTVFIDGLCKAGRVEDALLMLKDMDEKG--CVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G P+++++N + + K + F EM+K +PT + + L A +
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338
Query: 187 P---EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ AI +++ ++E G +P + + L+ GL G+L D RR M
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y L L G ++ +A M P + ++ L K+ + ++++D
Sbjct: 11 ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
V GF +P+++ YNA++ C + +D R +MV PD +TYN + L KN
Sbjct: 71 AVKRGF--VPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLL-DADEPEFAIEIWNYILENGILPLEAS 208
+V E ++ + P + +T I+ L + A++++ +L+ G P +
Sbjct: 129 GRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185
Query: 209 ANVLLVGL 216
N+L+ GL
Sbjct: 186 YNILIDGL 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN I YNA++ LCN + + +++M+ G PD +TYN + K ++ E
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F +K + P + I AD+ + A I ++ ++P + N L+ GL
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 219 LGRLSDVRRF-AEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
GR+ + R ++ + ++ Y + L + S +++
Sbjct: 128 NGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALK 169
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 7/207 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A +M E+ P+ V+++ + L + K+VDEA L M+ + C
Sbjct: 227 GLCKAGRVEDALLMLKDMDEK-GCVPD-VVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC---NNNDV 117
P F+ + + + + M+ G P ++ YN +V LC +
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK--PTVVTYNILVDGLCKARQEGRI 342
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
FD M+ G PD +TY+ + + L K K+ + M P +
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Query: 178 ITMLLDADEPEFAIEIWNYILENGILP 204
I+ L ++ + A+E++ ++E G +P
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVP 429
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ---VDEALKFLRVMKG 57
G + G +A TF EM++R V+ Y + L + +Q + EA+ M
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKR--GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P + +S +D L K +L M G +PN+ YN+++ LC V
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG--CIPNVYTYNSLISGLCGLEKV 412
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFE 144
D F MV G PD++TY I
Sbjct: 413 DEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE V EA M E +P + +++ T + R + +A+ + M
Sbjct: 262 GLCKEKRVDEAEVLLSGM-EAKGCSP-NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319
Query: 61 FPTLKFFSNALDILVKLNDSTH---TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ ++ +D L K + L+D M+ G +P+++ Y+A++ L +
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG--RVPDVVTYSALIDGLGKAGKL 377
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D+ R M G P+ TYN + L +KV E F M++ P + T
Sbjct: 378 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTI 437
Query: 178 IT 179
I+
Sbjct: 438 IS 439
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
HG +P+ +TYN + L ++ + + + MIK + P + T + E +
Sbjct: 4 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A++I++ ++ G +P + N L+ G +L + +R + M++ ++ VT L
Sbjct: 64 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123
Query: 250 AFYNESR 256
R
Sbjct: 124 GLCKNGR 130
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 4/228 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + A F EM R V+++ T + + R +D A R M P +
Sbjct: 254 GELASAQNVFDEMQSRGVR--RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVY 311
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + L ++ +++ M G G PN +++ ++ C D + +
Sbjct: 312 TYGALIQGLCRVGRIEDARGVFEKMCGRGMK--PNAVVFTILIDAHCKKGDAETMLELHR 369
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G PD++TYN I L + + + EM +P + T I +
Sbjct: 370 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEE 429
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
E + A+EI ++ G+ E + L+ GL GR +D R EM+
Sbjct: 430 ELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 10/197 (5%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P K F+ + LV+L + ++D M G ++ +N ++ +C D+D
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRR--TVVSFNTMISGMCRAGDLDGAE 295
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+M G PD TY + + L + ++ + F +M +P A T+L
Sbjct: 296 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN----AVVFTIL 351
Query: 182 LDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+DA + E +E+ + E G+ P + N ++ GL L EM + +
Sbjct: 352 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 411
Query: 238 LIYDVTMQKLKKAFYNE 254
VT L + E
Sbjct: 412 RPDTVTYTTLIDGYCKE 428
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 94/254 (37%), Gaps = 45/254 (17%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L R ++++A M G P F+ +D K D+ ++L
Sbjct: 310 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 369
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY--------- 139
M G P+ + YNA+V LC D+ + +M G PD++TY
Sbjct: 370 EMRERGVR--PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 427
Query: 140 ------------NMIFEC--------------LIKNKKVHEVENFFHEMIKNEWQPTPLN 173
NM+ E L K + + E EM++ +P
Sbjct: 428 EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPD--- 484
Query: 174 CATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T TM++DA + + + + + G P + NV++ G LG++ +
Sbjct: 485 -NTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 543
Query: 230 EEMLNRRILIYDVT 243
M+N + D+T
Sbjct: 544 NAMINIGVSPDDIT 557
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ GL+ F+ Q++ G P++ +N++ L++ ++ +N F EM
Sbjct: 209 TSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS 268
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ T ++ T I+ + A + + A + + E G+ P + L+ GL +GR+ D
Sbjct: 269 RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED 328
Query: 225 VRRFAEEMLNR 235
R E+M R
Sbjct: 329 ARGVFEKMCGR 339
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +A + GEM+E P++ Y + R V L+ L+ M+ +
Sbjct: 459 GLSKAGRSADAERVLGEMME-AGLEPDNT-TYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ KL + L + M+ IG + P+ I YN ++ C + V ++
Sbjct: 517 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS--PDDITYNILLDGHCKHGKVTDI 574
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G PD Y I ++K K
Sbjct: 575 EELKSA---KGTVPDLGVYTSIVGEIVKKK 601
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + L + + +A + L M P ++ +D + D ++L
Sbjct: 451 VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKE 510
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G P ++ YN ++ C + N + M+ G PD +TYN++ + K+
Sbjct: 511 MQNKGRK--PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568
Query: 150 KKVHEVENF 158
KV ++E
Sbjct: 569 GKVTDIEEL 577
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G V EA + +M E + P+ ++ + + TL + +VDEA K +K
Sbjct: 519 YSKAGQVDEAIELLSDMSEN-QCEPD-IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLA 576
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ + L K ++L+ M G G PN I +N ++ LC N++VD
Sbjct: 577 PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG--CPPNTITFNTILDCLCKNDEVDLAL 634
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M PD LT+N I L+ K+V + FH+M K TP +C T T+L
Sbjct: 635 KMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK---MLTP-DCVTLCTLL 690
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
F+R K PTL+ ++ ++ + +++ L+ M G P++ YN ++
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG--CAPDVFTYNLLLDA 834
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ ++ +F ++QM+ P+++T+N+I L+K+ + + + F++++ ++ PT
Sbjct: 835 HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPT 894
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
P + LL + E A E++ +++ G P A N+L+ G G+ DV E
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING---FGKTGDVNTACE 951
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ EA M R + ++ Y T + L+R ++D+AL M+ PT
Sbjct: 381 KAGNIDEAFHLLDVM--RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +D K S ++ ++ M G + PN++ NA + L +
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRG--IAPNIVACNASLYSLAEMGRLREAKVI 496
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+++ +G PDS+TYNM+ +C K +V E +M +N+ +P + + I L
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
A + A +++ + + + P + N L+ G LG+ V+R E
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAG---LGKEGQVQRAME 600
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 6/234 (2%)
Query: 6 GNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G + + FG+M E F N +Y + L++ EAL+ R M E P+L
Sbjct: 173 GGLRQTPFAFGKMREAGFHLN---AYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSL 229
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
K FS + K D+ L + M +G L PN+ Y + +L +D R
Sbjct: 230 KTFSALMVATGKRRDTETVKSLLEEMESLG--LKPNIYTYTICIRVLGRAGRIDEACRIM 287
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M G PD +TY ++ + L K+ + F +M + +P + T + D
Sbjct: 288 KRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDC 347
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ E W+ + +G P + +L+ L G + + + M + +L
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL 401
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y L L++ +++EA + M C P ++ ++ K D +L+ M
Sbjct: 897 TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V G + P+L Y ++VG LC VD+ +F+++ G + DS+ YN++ + L ++
Sbjct: 957 VREG--IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E + EM P + I L A E A +++ + G+ P + N
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 211 VLLVG 215
L+ G
Sbjct: 1075 ALIRG 1079
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 2/202 (0%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
M+ + P + F+ ++ L K + L D+M G ++PNL YN ++ L
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG--VLPNLHTYNTLISGLLRV 417
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
N +D+ F+ M G P + TY + + K+ + + F +M P + C
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ L + A I+N + NG+ P + N+++ G++ + +M
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537
Query: 235 RRILIYDVTMQKLKKAFYNESR 256
+ + + L Y R
Sbjct: 538 NQCEPDIIVINSLINTLYKAGR 559
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL-W 87
V Y L + +++E + M +C P + + LVK N + L +
Sbjct: 825 VFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D++ G + P Y ++ L + ++ F++MV +G P++ YN++
Sbjct: 885 DLVSG---DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K V+ F M++ +P + + + L +A + A+ + + + G+
Sbjct: 942 KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ N+++ GL R+ + +EM +R I
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRGI 1031
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G+V A + F MV R P+ + +Y + + L +VD+AL + +K
Sbjct: 939 GFGKTGDVNTACELFKRMV-REGIRPD-LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ +D L + + + L+D M G N P+L YN+++ L V+
Sbjct: 997 YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN--PDLFTYNSLILNLGVAGMVEQA 1054
Query: 121 FRFFDQMVFHGAFPDSLTYNMIF 143
+ ++++ F G P+ TYN +
Sbjct: 1055 GKLYEELQFIGLEPNVFTYNALI 1077
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 4/185 (2%)
Query: 31 AYETFLITLIRGK--QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
AY L GK + D+AL+ MK P + + +L L ++ +++
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G L P+ + YN ++ VD M + PD + N + L K
Sbjct: 499 RLKSNG--LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V E F + + PT + T I L + + A+E++ + NG P +
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTIT 616
Query: 209 ANVLL 213
N +L
Sbjct: 617 FNTIL 621
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A+ +++ R Q+ +ALK L +M+ P L + +D+ V+ N ++ + M
Sbjct: 247 AFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 306
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G ++PN++ YN ++ C+ + V+ D M G PD ++Y I L K K
Sbjct: 307 QVVG--IVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEK 364
Query: 151 KVHEVENFFHEMIKNEW-QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ EV + +M K + T I ML D + A+ E G +
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ ++ L GR+S+ + EML++
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSK 450
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 4/237 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE +VE +M + + V Y T + L + DEAL FL+ + E F
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQV-TYNTLIHMLTKHDHADEALWFLKDAE-EKGFRI 419
Query: 64 LKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
K +S + L K + L + M+ G + P+++ Y AVV C +VD +
Sbjct: 420 DKVGYSAIVHALCKEGRMSEAKDLINEMLSKG-HCPPDVVTYTAVVNGFCRLGEVDKAKK 478
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M HG P++++Y + L + K E + + W P + + + L
Sbjct: 479 LLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLR 538
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ A ++ ++ G P N+LL L GR + R+F EE LN+ I
Sbjct: 539 KEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 595
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 10/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G +EA + M E W+P + Y + L + ++ EA +R M +
Sbjct: 501 GLCRTGKSLEAREMM-NMSEEQWWSPNSI-TYSVLMHGLRKEGKLSEACDVVREMVLKGF 558
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + L L + + + + + G + N++ + V+ C N+++D
Sbjct: 559 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI--NVVNFTTVIHGFCQNDELDAA 616
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M D TY + + L K ++ E +M+ PTP+ T I
Sbjct: 617 LSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 676
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA--NVLLVGLRNLGRLSDVRRFAEEML 233
++ ++ ILE IL + N ++ L LG+L + + ++L
Sbjct: 677 YCQMEK----VDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVL 727
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
W N+VEA + + EM+E+ P+ V+ + T + L+RG++ EALK +MK +
Sbjct: 343 WCNARNLVEAGRVWNEMLEK-GMKPD-VVVHNTMIEGLLRGQRRPEALKMFELMKAKGPP 400
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ + K ++ ++ M P++ Y ++ N +D V
Sbjct: 401 PNVWTYTMLIRDHCKRGKMDMAMECFEEMQEA--RCQPDVATYTCLLVGYGNAKRMDRVT 458
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT--PLNCATAIT 179
++M G PD+ TYN + + L K + + +MIK +PT N
Sbjct: 459 AVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSY 518
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L D + +W + GI P S V + G GR + ++ EEM+N+ +
Sbjct: 519 FLGDRNY-AMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTA 577
Query: 240 YDVTMQKLKKAFYNESR 256
+ K F +
Sbjct: 578 PQIDYNKFAADFSKAGK 594
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 12/266 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV--MKGE 58
+ K G +A ++FG M E F+ P+ V Y L ++R ++V L F M
Sbjct: 136 AYAKMGMAEKAVESFGRMKE-FDCRPD-VFTYNVILRVMMR-EEVFFMLAFAVYNEMLKC 192
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
NC P L F +D L K ++ +++D M G G + PN + Y ++ LC D
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSAD 250
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + F +M G +PDS+ +N + + K ++ E K+ + ++ I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI- 237
L A A E++ +L+ I P +L+ GL G++ D + M ++ I
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 238 ---LIYDVTMQKL-KKAFYNESRSMR 259
Y+ ++ L + E RS++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQ 396
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ +A K F EM + P+ V A+ L + ++ EA + LR+ + +
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNY-PDSV-AHNALLDGFCKLGRMVEAFELLRLFEKDGF 299
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L+ +S+ +D L + T +L+ M + N+ P++I+Y ++ L +++
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANM--LKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD+ YN + + L + E + EM + E P I
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A EI+ I ++G P A+ N L+ GL G L + R +M
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA---LKFLRVMKGENC 60
+ G V EA + F E +E+ +P V + + L + ++ EA L + V + +
Sbjct: 420 RNGLVREAEEIFTE-IEKSGCSPS-VATFNALIDGLCKSGELKEARLLLHKMEVGRPASL 477
Query: 61 FPTLKFFSN-ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F L N + D +V+ + G + P+++ YN ++ C D+D
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSS--PDIVSYNVLINGFCRAGDIDG 535
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+ + + G PDS+TYN + L + + E F+ K++++ +P
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSP 585
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K+ + EA EM + FE N ++ Y L L + +V +AL L M +
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELN---IMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F+ + L K++ + L+ M+ G ++ N + YN ++ +
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDG--VIANTVTYNTLIHAFLRGGAIQE 538
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + M+F G D +TYN + + K + F EM++ + P+ ++C I
Sbjct: 539 ALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLIN 598
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + A+E+ ++ G+ P + N L+ GL +G + +
Sbjct: 599 GLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREA 644
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 41 RGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
R +A + L MKG C PT K ++ LDILV N + ++ M+ G ++P
Sbjct: 149 RANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKG--VIP 206
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+ + V+ LC N+VDN M HG P+S+ Y + L K +V+E
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM P I L + ++ + +L G P + + VL+ GL +
Sbjct: 267 EEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G++ + A+ +LN+ DV L + R
Sbjct: 327 GKVDE----AQVLLNKVPTPNDVHFTILINGYVKSGR 359
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 5/232 (2%)
Query: 40 IRGKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
++ ++DEA FL M C P + F+ + L K V + + M G
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG--CT 412
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PNLI Y ++ C N ++ ++M G + + YN++ L KN KV + +
Sbjct: 413 PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM 472
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM +P T I L D E A+ ++ +L +G++ + N L+
Sbjct: 473 LGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR 532
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF--YNESRSMRDRFDSLERR 268
G + + + +ML R + ++T L KAF + FD + R+
Sbjct: 533 GGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y+T + L + +V+EALK L M C P + F++ + L +LN +L D
Sbjct: 244 VVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDR 303
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF PN I Y ++ LC VD +++ P+ + + ++ +K+
Sbjct: 304 MLFRGFT--PNDITYGVLMNGLCRVGKVDEAQVLLNKV----PTPNDVHFTILINGYVKS 357
Query: 150 KKVHEVENFFHE-MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E F ++ MIKN +P T I L A+++ N + NG P +
Sbjct: 358 GRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLIT 417
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
LL G +L + EM + I+ Y+V ++ L K
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK 462
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EAN + + + P+ V + T + L + + A+ + M C
Sbjct: 353 GYVKSGRLDEANAFLYDKMIKNGCRPD-VFTFNTLIHGLCKKGLMGSAVDMVNDMSANGC 411
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ LD K N + + M GF L N++ YN ++ LC N V
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFEL--NIMGYNVLLRALCKNGKVPKA 469
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G PD T+N + L K + + + +M+ + + T I
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + A+++ N +L G E + N L+ LG +EM+ + ++
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589
Query: 241 DVTMQKL 247
+++ L
Sbjct: 590 NISCNLL 596
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y T + +RG + EALK + M C ++ + KL + + L+
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D MV +L+P+ I N ++ LC V N M+ G PD +TYN + L
Sbjct: 579 DEMVRK--DLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
K + E N F+++ QP + T I
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + + L +VD A LR M C P + + L K + ++L +
Sbjct: 208 VYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLE 267
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +G +P++ +N V+ LC N + + D+M+F G P+ +TY ++ L +
Sbjct: 268 EMFLMG--CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE-----IWNYILENGIL 203
KV E + +++ PTP + T+L++ ++ +++ +++NG
Sbjct: 326 VGKVDEAQVLLNKV------PTPND--VHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + N L+ GL G + +M
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ A + +M+E +P V + + +V++AL +++ +
Sbjct: 239 GFIEEGSIEAALRVKTKMMET-GCSPTRV-TVNVLINGYCKMGRVEDALGYIQKEIADGF 296
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + +H +++ D+M+ G + P++ YN V+ L N ++D
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD--PDVFTYNTVINCLSKNGELDEA 354
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QMV G PD+ T+N + L ++ E + E+ P I
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L +P I ++ + +G P E + N+L+ L ++G+L + +EM R
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
+ Y+ + L K+ E+ + D+ D+
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDA 503
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 6/214 (2%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
E + V ET TL++G ++ AL+ M C PT + ++ K+
Sbjct: 220 EMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMG 279
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ + GF P+ + YN V LC N V + + D M+ G PD T
Sbjct: 280 RVEDALGYIQKEIADGFE--PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
YN + CL KN ++ E + ++M+ P T I L + E A+++ +
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G+ P + N+L+ L +G R EEM
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 5/263 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G+V A K M++ E + V Y T + L + ++DEA + M C P
Sbjct: 312 QNGHVSHALKVMDLMLQ--EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPD 369
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + L N + L + G L P++ +N ++ LC D R
Sbjct: 370 TTTFNTLIVALCSQNRLEEALDLARELTVKG--LSPDVYTFNILINALCKVGDPHLGIRL 427
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M G PD +TYN++ + L K+ + EM N + + T I L
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
E A E+++ + +GI + N L+ GL R+ D E+M+ + ++T
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 244 MQKLKKAFYNESRSMRDRFDSLE 266
+ Y + ++ D LE
Sbjct: 548 YNSI-LTHYCKQGDLKKAADILE 569
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 4/254 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +MV+R P+ + T ++ L +++EAL R + + P
Sbjct: 347 KNGELDEAKGIVNQMVDR-GCLPD-TTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ ++ L K+ D ++L++ M G P+ + YN ++ LC+ + N
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSG--CAPDEVTYNILIDHLCSMGKLVNALDL 462
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M +G ++TYN I + L K ++ E E F +M + + + T I L
Sbjct: 463 LKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCK 522
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + A E+ +++ G+ P + N +L G L E M I VT
Sbjct: 523 AKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVT 582
Query: 244 MQKLKKAFYNESRS 257
L R+
Sbjct: 583 YGTLINGLCKAGRT 596
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 3/191 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
GK V+ AL L+ M+ C + ++ +D L K +++D M G + +
Sbjct: 454 GKLVN-ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS--RSA 510
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ LC +D+ +QMV G P ++TYN I K + + +
Sbjct: 511 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M N ++ + T I L A + A+++ + GI P + N ++ L
Sbjct: 571 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 630
Query: 222 LSDVRRFAEEM 232
L D EM
Sbjct: 631 LRDALSLFREM 641
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F + + +YN ++ +L + + + +++M G PD +T N + + L + +V
Sbjct: 154 FGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRT 213
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
EM + P T + ++ E A+ + ++E G P + NVL+
Sbjct: 214 AVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN 273
Query: 215 GLRNLGRLSDV 225
G +GR+ D
Sbjct: 274 GYCKMGRVEDA 284
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 36/200 (18%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ + EA + F +M + + T + L + K++D+A + + M E P+
Sbjct: 487 KQMRIEEAEEVFDQM--DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPS 544
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGF---------------------------- 95
+++ L K D + + M GF
Sbjct: 545 NITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLR 604
Query: 96 -----NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK-N 149
+ P YN V+ L N++ + F +M G PD+LTY ++F L +
Sbjct: 605 GMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Query: 150 KKVHEVENFFHEMIKNEWQP 169
+ E +F EM+ + P
Sbjct: 665 GPIKEAFDFLVEMVNKGFMP 684
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 43/289 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A F +M E P+ V+ Y T + +L + ++V+EAL MK +
Sbjct: 19 GLCKIGETVAAAGLFKKMGEA-GCQPD-VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV--- 117
P + +++ + L + + + M+ + N+MPN++ ++ ++ + C +V
Sbjct: 77 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL--NIMPNIVTFSLLINIFCKEGNVFEA 134
Query: 118 -----------------------------DNVF---RFFDQMVFHGAFPDSLTYNMIFEC 145
VF + FD M+ G PD +YN++
Sbjct: 135 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILING 194
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K K++ E + F+EMI P ++ T I L A +++ +L NG LP
Sbjct: 195 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD 254
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL G G L+ R M L +++Y++ + + K+
Sbjct: 255 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V EA K F M+ + P+ V +Y + + K++ EA + M +
Sbjct: 159 GYSLQAEVFEARKLFDVMITK-GCKPD-VFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 216
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L +L L+ M+ G NL P+L Y+ ++ C +
Sbjct: 217 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG-NL-PDLCTYSILLDGFCKQGYLAKA 274
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
FR F M P+ + YN++ + + K++ + E F E+ QP
Sbjct: 275 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 323
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV G PD TY I L K + F +M + QP + +T I L
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A++I++Y+ GI P + N L+ GL N R + EM++ I+ VT
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 247 LKKAFYNESRSMRDR 261
L F E R
Sbjct: 121 LINIFCKEGNVFEAR 135
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F EM+ + P+ +++Y T + L + ++ EA + M
Sbjct: 194 GYCKAKRIGEAKQLFNEMIHQ-GLTPD-IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S LD K +L+ M L PN++MYN ++ +C + ++
Sbjct: 252 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST--YLKPNMVMYNILIDAMCKSRNLKEA 309
Query: 121 FRFFDQMVFHGAFPD 135
+ F ++ G P+
Sbjct: 310 RKLFSELFVQGLQPN 324
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ ++ L K+ ++ L+ M G P+++ Y+ ++ LC + V+
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAG--CQPDVVTYSTIIDSLCKDRRVNEAL 65
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F M G P+ TYN + + L + E +EM+ P + + I +
Sbjct: 66 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A + + E G+ P + + L+ G + + R+ + M+ +
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + N+VEA +T+ EM+++ + P+ ++A+ T L L++ K+ +A+K VMK +
Sbjct: 336 GWCRIKNLVEAGRTWNEMIDK-GFKPD-IIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 393
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L K V+ +D MV G P+ +Y ++ N +D V
Sbjct: 394 SPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSG--CQPDAAVYTCLITGFGNQKKMDKV 451
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ +M G D TYN + + + + + + +MI+N Q T
Sbjct: 452 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQST 501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 6/245 (2%)
Query: 10 EANKTFG--EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
E K G E+++R+ ++ V L L R K EA ++ + P L+ +
Sbjct: 273 ERKKAVGVFELMKRYNFD-AGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTY 330
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L+ ++ + + W+ M+ GF P++I ++ ++ L + + F+ M
Sbjct: 331 TVLLNGWCRIKNLVEAGRTWNEMIDKGFK--PDIIAHHTMLEGLLKCKKKSDAIKLFEVM 388
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G P+ TY ++ L K K+ E +F EM+ + QP IT + +
Sbjct: 389 KAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKM 448
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ + + E G + N L+ + N D R ++M+ I T +
Sbjct: 449 DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMM 508
Query: 248 KKAFY 252
K+++
Sbjct: 509 MKSYF 513
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G A + EM+ F N ++ + + L D AL+F+ M N
Sbjct: 401 GYCKSGQADIAERLLKEMLSIGFNVNQG---SFTSVICLLCSHHMFDSALRFVGEMLLRN 457
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + L K + V+LW + GF + + NA++ LC ++
Sbjct: 458 MSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF--LVDTKTSNALLHGLCEAGKLEE 515
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
FR +++ G D ++YN + NKK+ E F EM+K +P + I
Sbjct: 516 GFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIR 575
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
LL+ ++ E AI+ W NG++P + +V++ G R + ++ +EM++ +
Sbjct: 576 GLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP 635
Query: 240 YDVTMQKLKKAFYNESR 256
V L A+ R
Sbjct: 636 NTVVYNHLIGAYCRSGR 652
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 35 FLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
L +L+R + + + F V KG + P + F+ A++ K ++L+ M
Sbjct: 224 LLTSLVRATEFQKCCEAFHVVCKGVS--PDVYLFTTAINAFCKGGKVEEAIELFSKMEEA 281
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G ++PN++ YN V+ L + D F F ++MV G P +TY+++ + L K K++
Sbjct: 282 G--VVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIG 339
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ EM + + P + I L++A AIEI + ++ G+ ++ N L+
Sbjct: 340 DAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 399
Query: 214 VGLRNLGRLSDVRRFAEEMLN 234
G G+ R +EML+
Sbjct: 400 KGYCKSGQADIAERLLKEMLS 420
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
+MVER P ++ Y + L + K++ +A L+ M + P + ++N +D L++
Sbjct: 312 KMVER-GVEPT-LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIE 369
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+++ D+MV G +L + YN ++ C + D R +M+ G +
Sbjct: 370 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQ 427
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
++ + L + F EM+ P T I+ L + A+E+W
Sbjct: 428 GSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLK 487
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G L ++N LL GL G+L + R +E+L R ++ V+ L
Sbjct: 488 FLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTL 538
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 6/212 (2%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
LIRG +V+EA++F K P + +S +D K + +L+D M +
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM--MS 630
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
NL PN ++YN ++G C + + + M G P+S TY + + + +V E
Sbjct: 631 NNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 690
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ EM +P + I + + + + P + + V++
Sbjct: 691 AKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 750
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
G G +++ R EM + I+ +T ++
Sbjct: 751 GYARDGNVTEASRLLHEMREKGIVPDSITYKE 782
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F + G FP T N++ L++ + + FH + K P TAI
Sbjct: 206 FPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKG-VSPDVYLFTTAINAFCK 264
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LI 239
+ E AIE+++ + E G++P + N ++ GL GR + F E+M+ R + +
Sbjct: 265 GGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLIT 324
Query: 240 YDVTMQKLKKA 250
Y + ++ L KA
Sbjct: 325 YSILVKGLTKA 335
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
AL V+ + FP+ + L LV+ + + + ++ + P++ ++
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK---GVSPDVYLFTTA 258
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ C V+ F +M G P+ +TYN + + L + + E F +M++
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
+PT + + + L A A + + E G P N L+ L G L+
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ M+++ + + T L K + ++
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQA 408
>gi|255581311|ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528920|gb|EEF30916.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 518
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 8/241 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK--GE 58
G+ G + EA + EM R +V+ Y T + + R V+ AL+ L M+ G
Sbjct: 207 GFCDIGRLEEACRLVKEM--RAHGCVPNVVVYSTLVDGICRFGSVERALELLGGMEKEGG 264
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
+C P + +++ + L + + + D M G PN + + ++ LC + ++
Sbjct: 265 DCNPNVLTYTSVIQGLCEKGRTMDAFAVLDRMEACG--CAPNRVTVSTLLKRLCMDGHLE 322
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
++ D++V G+ Y+ I CLI+ KKV E E F + + +P L C+ I
Sbjct: 323 EAYKLIDRVVAGGSVSSCDCYSPIVVCLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMI 382
Query: 179 TMLLDADEPEFAIEIWNYILENGILPL--EASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
L + + + I + G L + +VLLVGL G + + A ++ +R
Sbjct: 383 KELCFVNRVLDGYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKR 442
Query: 237 I 237
I
Sbjct: 443 I 443
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F++ + Y V+ L C+ D+D + +M F+ +PD +TY I + ++ E
Sbjct: 157 FDIQADTKAYTIVIRLFCDKGDMDMAQKLMGEMSFNDLYPDMVTYVSIIKGFCDIGRLEE 216
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL-- 212
EM + P + +T + + E A+E+ + + G + + NVL
Sbjct: 217 ACRLVKEMRAHGCVPNVVVYSTLVDGICRFGSVERALELLGGMEKEG---GDCNPNVLTY 273
Query: 213 ---LVGLRNLGRLSD 224
+ GL GR D
Sbjct: 274 TSVIQGLCEKGRTMD 288
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K N +L+D M+ L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKENKMDDANKLFDEMLVKA--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM QP + T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQANDLIDEM 308
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC N +D+
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKENKMDDAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ FD+M+ P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +ANK F EM+ + P V + T + + +VD A++ + M ++
Sbjct: 221 GLCKENKMDDANKLFDEMLVK-ALVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K D L D M G L P+ I Y ++ C D+D
Sbjct: 279 LPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG--LQPDKITYTTLIDGCCKEGDLDTA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ D + Y + L + + + E EM+ +P I
Sbjct: 337 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ ++ + +G +P + NVL+ G
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 21/253 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F N + +++L L + K E
Sbjct: 82 WELMKESGFVEDSTTYGILVHGFCKNGYN-----------------NKSLHVLEIAKQEG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S + L K+ V + + M+ G PN +YNA++ L + ++
Sbjct: 125 GALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCK--PNTQVYNALINGLLGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F ++ P +TYN + L K ++ E + EM++ W P+ + + I
Sbjct: 183 AIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN ++ G P N+L+ GL ++G+ +M +
Sbjct: 243 GLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAP 302
Query: 240 YDVTMQKLKKAFY 252
VT L + FY
Sbjct: 303 NLVTYNTLMEGFY 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 8/215 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L+ + ++A++ + + +C PT+ ++ ++ L K L M+
Sbjct: 167 YNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEML 226
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+N P++I Y+ ++ LC ++ V+ + ++Q++ G PD +N++ L K
Sbjct: 227 EKGWN--PSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILPLEAS 208
+ +M N W P N T T++ + A+ IW IL NG+LP S
Sbjct: 285 TEHASELYFDM--NHWNCAP-NLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIIS 341
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
N+ L GL R+S F + + + I+ +T
Sbjct: 342 YNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
++ A + + M P ++ L+ K + LW++M G N+ +
Sbjct: 6 INAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELM---GREGSRNVASF 62
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK----NKKVHEVENFFH 160
N ++ L NN +VD VF ++ M G DS TY ++ K NK +H +
Sbjct: 63 NTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVL----- 117
Query: 161 EMIKNEWQPTPLNCATA-ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
E+ K E +A I+ L + + A+ + N ++E+G P N L+ GL
Sbjct: 118 EIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGA 177
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD----SLERRWKTS 272
+ D R +E+ R VT L R + +D LE+ W S
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGER-FAEAYDLVKEMLEKGWNPS 233
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
EA EM+E+ WNP V+ Y + L + +V+ AL+ + + P ++ +
Sbjct: 216 AEAYDLVKEMLEK-GWNPS-VITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHN 273
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ L + + H +L+ M +N PNL+ YN ++ D N + +++
Sbjct: 274 ILIHGLCSVGKTEHASELYFDMNH--WNCAPNLVTYNTLMEGFYKGGDTRNALVIWARIL 331
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+G PD ++YN+ + L ++ F ++ + PT
Sbjct: 332 RNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPT 373
>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 376
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N +A M++ HV Y T + L+ + ++A+ R M +C
Sbjct: 138 GLCKEANFDKAVSVLNGMIKSGCKPNAHV--YNTLINGLVAASKFEDAIIVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVAKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 75/191 (39%), Gaps = 8/191 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK---LNDSTHTVQ 85
V ++ + L +VDE + +MK F + K +N S H ++
Sbjct: 59 VSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLE 118
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ + G+ + Y+A++ LC + D + M+ G P++ YN +
Sbjct: 119 MAEQKGGV-----LDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLING 173
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L+ K + F EM PT + T I L + A + +L+ G+ P
Sbjct: 174 LVAASKFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLNPG 233
Query: 206 EASANVLLVGL 216
+ ++L+ GL
Sbjct: 234 VITYSMLMKGL 244
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M+ P
Sbjct: 143 KDGDIRVAPLVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPD 200
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 201 VYTYSVLINGLCKESXMDDANELFDEMLVKG--LVPNXVTFTTLIDGHCKNGRVDLAMEI 258
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K +++ EM +P T I
Sbjct: 259 YKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCK 318
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 319 EGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLS 369
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P+++ YN ++ D+D FR M G PD TY+++ L K + +
Sbjct: 161 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDA 220
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F EM+ P + T I + A+EI+ +L +LP + N L+ G
Sbjct: 221 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYG 280
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L G L+ +EM +
Sbjct: 281 LCKKGDLNQAHGLIDEMXXK 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 164 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASG--VQPDVYTYSVLINGLCKESXMDDAN 221
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T + L
Sbjct: 222 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGL 281
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A + + + G+ P + + L+ G G L + M+ I + D
Sbjct: 282 CKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 341
Query: 242 VTMQKLKKAFYNESRS 257
V L E RS
Sbjct: 342 VAYTALISGLCQEGRS 357
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V ++ + L + V+ ALK M P L ++ L V D + +++
Sbjct: 157 NVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVF 216
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ G+ +P+ Y ++ C + + + D M ++G P+ +TY ++ +
Sbjct: 217 SEISDKGW--LPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYC 274
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K KK E N +M+ ++ P+ C I +L + + E A +W +LE LP A
Sbjct: 275 KEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNA 334
Query: 208 SANVLLVGLRNLGRLSDVRRFAEE 231
+ L+ L G++ + R+ +E
Sbjct: 335 IMSTLIHWLCKEGKVWEARKLFDE 358
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIR----GKQVDEALK-FLRVMKGENCFPTLKFFSNAL 71
++ + N H+ + I++IR + ALK F R+ + + P++K + L
Sbjct: 70 SLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLL 129
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
++ V+ N H V + ++PN+ +N ++ LC NDV+N + FD+M G
Sbjct: 130 NVFVQ-NKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMG 188
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
P+ +TY I + + E F E+ W P + AI
Sbjct: 189 MIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAI 248
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++ + + NG+ P E + V++ + + R ++ML+++ L
Sbjct: 249 KVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFL 295
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 5/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G++V A K F E+ ++ W P+ Y ++ + ++ +A+K + M+
Sbjct: 202 GFVSRGDLVNAEKVFSEISDK-GWLPD-ATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGV 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K S L D M+ F +P+ + V+ +LC + V+N
Sbjct: 260 EPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKF--LPSSTLCCKVIDVLCEDGKVENA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M+ PD+ + + L K KV E F E + P+ + T I
Sbjct: 318 CHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTI-PSLMTYNTLIAG 376
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + E A +W+ ++E P + N+L+ G G + + R EEML+ L
Sbjct: 377 MCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCL 434
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 11/239 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWN---PEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
G+ K+G + +A K M E+N P V Y + + K+ EA + M
Sbjct: 237 GYCKQGRLSDAIKVMDNM----EYNGVEPNEV-TYGVMIDAYCKEKKSGEARNLIDDMLD 291
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P+ +D+L + + LW M + N +P+ + + ++ LC V
Sbjct: 292 KKFLPSSTLCCKVIDVLCEDGKVENACHLWKRM--LEKNCLPDNAIMSTLIHWLCKEGKV 349
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ FD+ G P +TYN + + + +++E + +M++ +P
Sbjct: 350 WEARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNML 408
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + A + + I +L+NG LP +++ +L+ GL+ G DV + + R
Sbjct: 409 IKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASR 467
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F +M +RF P+ + L + + D +F + M G PT+
Sbjct: 77 GMLEEATQCFSKM-KRFRVFPK-TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVF 134
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + K D L++ M G L+P+ + YN+++ +D+ FF+
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRG--LIPDTVTYNSMIDGYGKVGRLDDTVYFFE 192
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TYN + C K+ K+ + F+ EM ++ +P ++ +T + D
Sbjct: 193 EMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKED 252
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ AI+ + + G +P E + L+ +G LSD R A EML
Sbjct: 253 MMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + + F EM + P+ V+ Y + + + ++ + L+F R MK
Sbjct: 177 GYGKVGRLDDTVYFFEEM-KSMSCEPD-VITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D K + ++ + M +G +PN Y ++V C ++ +
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH--VPNEFTYTSLVDANCKIGNLSDA 292
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR ++M+ G + +TY + + L +++ E E F +M+ P + I
Sbjct: 293 FRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI--- 237
+ A + A+E+ N + GI P + GL L ++ + EM I
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412
Query: 238 -LIYDVTMQKLKKA 250
LIY M K+
Sbjct: 413 TLIYTTLMDAYFKS 426
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F EM +F + Y + + + ++D+ + F MK +C P
Sbjct: 145 KEGDIEAARGLFEEM--KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ ++ K ++ + M G L PN++ Y+ +V C + + +F
Sbjct: 203 VITYNSLINCFCKSGKLPKGLEFYREMKQSG--LKPNVVSYSTLVDAFCKEDMMQQAIKF 260
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M G P+ TY + + K + + +EM++ + + I L D
Sbjct: 261 YVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ + A +++ ++ G++P AS N L+ G + E+ R I
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 374
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 37/173 (21%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P F +L+ L Q + M F + P N ++ D
Sbjct: 59 CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKR--FRVFPKTRSCNGLLHKFAKLGKTDG 116
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
V RFF M+ G+ P TYN++ +C+ K + F EM
Sbjct: 117 VKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM----------------- 159
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+F G++P + N ++ G +GRL D F EEM
Sbjct: 160 --------KF----------RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 12/265 (4%)
Query: 4 KEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K GN+ +A + EM+E EWN V+ Y + L +++ EA K M P
Sbjct: 285 KIGNLSDAFRLANEMLEVGVEWN---VVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
L ++ + VK + ++L + + G G + P+L++Y + LC ++
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRG--IQPDLLLYGTFIWGLCGLEKIEAAKV 399
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M +G ++L Y + + K+ E + EM + + + T + I L
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459
Query: 183 DADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL--- 238
AI+ + + + G+ P A ++ GL ++ E+M ++
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519
Query: 239 -IYDVTMQ-KLKKAFYNESRSMRDR 261
Y M LK+ E+ ++RD+
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDK 544
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPE---HVLAYETFLITLIRGKQVDEALKFLRVMKG 57
GW + + +A K EM+ + PE ++ A ++F + + E +F+R
Sbjct: 257 GWCRARDPKKAMKVLEEMI-LMKHAPESFTYIAAIDSFCSAGLVS-EAKELFEFMRTEGS 314
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K +S + LVK + +L M+ +G MP++ + ++ +C + +
Sbjct: 315 SISSPTAKAYSVMIVALVKADRMDDCFELISDMIKLG--CMPDVSTFKDLIEGMCLVDKI 372
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + ++M G PD +TYN E L +K + MI+ +P+
Sbjct: 373 DTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNML 432
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M EP A++IW + + G + +++ GL + GR D +E++N +
Sbjct: 433 MVMFFQMREPHRALDIWLEMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVINHDM 492
Query: 238 LI----YDVTMQKLKK-----AFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D M +L A + S MR ++ ++ RR+ +Q
Sbjct: 493 KLSYKKFDAIMLQLSAVGNLGAIHRLSEHMRKFYNVAMSRRFSITQ 538
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRAVSVLNGMIKSGCKPNAHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 35/154 (22%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS--------------------------- 136
Y+A++ LC ++D + M+ G P++
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 137 --------LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+TYN + L KN+ E N E++ P + + + L + E
Sbjct: 192 TMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A+++WN + G P NVL+ GL ++G++
Sbjct: 252 KALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKM 285
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 13/172 (7%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+LW++M G + + +N ++ L +N VD V ++ M G DS+TY ++
Sbjct: 46 ELWEMMGSEGNRSVSS---FNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVH 102
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNC---ATAITMLLDADEPEFAIEIWNYILENG 201
KN ++ H + E + L+ + I L + A+ + N ++++G
Sbjct: 103 GFCKNG---YIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKK 249
P N L+ GL + D R EM + I+ Y+ + L K
Sbjct: 160 CKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCK 211
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
YE + +L + ++D A K + MK P+ FS+ +D + K +++++ M
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G P+ M+ +++ +D R +D+M G P+ Y MI E K+ K
Sbjct: 376 GFGHR--PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ F +M K + PTP + + M + + + A++I+N + G+ P +S
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 212 LLVGLRNLGRLSDV 225
LL L N RL DV
Sbjct: 494 LLTLLAN-KRLVDV 506
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG V EA EM+E+ P V Y + L + +EA++ + MK C
Sbjct: 277 GLCNEGRVDEALDMLEEMIEK-GIEPT-VYTYTLPITALCAIEHEEEAIELVARMKKRGC 334
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L +L + L+ M+ G L+PN + YNA++ LC
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG--LVPNTVTYNALINELCVGGRFSTA 392
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M HG+ ++ TYN I + L + + F +M+K PT + T I
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A + + + ENG P E + N L+ G G+L + +EM+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L G + ALK M+G + ++ + L D + L++
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ +G +P ++ YN ++ +V+N R D M +G PD TYN + K
Sbjct: 433 KMLKMG--PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL----ENGILP 204
K+ +F EM++ P P+ + T L+D + ++I +L E G P
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPV----SYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
S N ++ GL R S+ + ++M+ + +L +T L R+
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T LI L + + V+ A + M P+L F+ ++IL K + +
Sbjct: 168 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI--F 225
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
++L P++ Y +++ C N ++D F FD+MV G P+S+TY+ + L +V
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + EMI+ +PT IT L + E AIE+ + + G P + L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
GL LG+L +ML ++ VT L
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 92/234 (39%), Gaps = 4/234 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + + V+ A + L +MK C P ++ + K +
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G N PN + Y A++ + VD +M G P+ +YN + L K
Sbjct: 503 EMVECGLN--PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E E +M++ P + T I L +FA +I++ + + LP +
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL--KKAFYNESRSMRD 260
+ L+ GL G+ + R +E + Y + L K FY + ++D
Sbjct: 621 YSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 674
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V EA ++ + ++ +P+ V Y + ++ R + +D A M E C P
Sbjct: 210 KKGKVREAELILSQIFQ-YDLSPD-VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPN 267
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S ++ L + + + M+ G P + Y + LC +
Sbjct: 268 SVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE--PTVYTYTLPITALCAIEHEEEAIEL 325
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M G P+ TY + L + K+ +H+M+K P + I L
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A++I++++ +G L + N ++ GL G + E+ML L VT
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 244 MQKLKKAF 251
L +
Sbjct: 446 YNTLINGY 453
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 82/222 (36%), Gaps = 8/222 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA K +MVE+ +V+ Y T + L R + A K M+ C
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLL--PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S+ + L + + ++ +I P L Y+ +V LC
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAERMSEI------GCEPTLDTYSTLVSGLCRKGRFYEA 668
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD Y + KN +V FH + +Q I
Sbjct: 669 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 728
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L A + E A +++ +LE E VL+ GL G L
Sbjct: 729 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 770
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+GF +L N ++ L V+ + QM+ G P LT+N + L K K
Sbjct: 156 GMGFGF--SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V E E ++ + + P + I + A +++ +++ G P + +
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI--LIYDVTM 244
L+ GL N GR+ + EEM+ + I +Y T+
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 8/232 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G A K F +M E+ + P ++ Y + + L + + DEA + + C
Sbjct: 592 GLCRNGRTQFAFKIFHDM-EKRKCLP-NLYTYSSLIYGLCQEGKADEAERMSEI----GC 645
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL +S + L + QL M GF P+ +Y +++ C N +VD+
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF--CPDREIYYSLLIAHCKNLEVDHA 703
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G Y + L K +V E + F M++ EW + +
Sbjct: 704 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 763
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
LL E + +++ + + P + +L L +G+ + A+++
Sbjct: 764 LLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMIDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
MI N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 6/273 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + A G MVE + + Y T + RG D A + + MK E
Sbjct: 331 GYCKEGKLARAEMLLGRMVE--QGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGF 388
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ + G L P+ + Y ++ C +
Sbjct: 389 LPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQG--LCPDKVTYTMLITEHCKQGHITYA 446
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+QM + PD TY I + +++ + + F + + PT + I
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAG 506
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A++++ ++++G LP + L+ GL RL + R E ML++ ++
Sbjct: 507 YCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPC 566
Query: 241 DVTMQKLKKAFYNESRSM--RDRFDSLERRWKT 271
DVT L + ++ D L++R +
Sbjct: 567 DVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQA 599
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 99/256 (38%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + +A K M P+ V Y + + + AL M +C
Sbjct: 401 GFCKKGKIQQAYKVL-RMATSQGLCPDKV-TYTMLITEHCKQGHITYALDLFNQMAENSC 458
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + + + + QL+D + IG L+P Y +++ C +
Sbjct: 459 HPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG--LVPTKQTYTSMIAGYCRVGKSTSA 516
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F++MV HG PD +TY + L K ++ E F M+ P + C T
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYE 576
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D+ A+ + + + +A+ L+ L + L F + +L++ +
Sbjct: 577 YCRRDKTTIAVSFLDGLDKR---QQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVD 633
Query: 241 DVTMQKLKKAFYNESR 256
T + Y +R
Sbjct: 634 HATYTSFINSCYESNR 649
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 3/162 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ +D L K + + MVG G L PN+ + +++ LC + F
Sbjct: 249 PNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKG--LKPNVYTHTSLIDGLCKIGWTERAF 306
Query: 122 RFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F ++V ++ P+ TY ++ K K+ E M++ P T I
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ A E+ N + G LP + N ++ G G++
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKI 408
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 7/237 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+L Y T + L R ++++++ +R M ++ +D K+ +T V L
Sbjct: 496 LLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQ 555
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +G + ++ Y ++ LC V R+FD M +G P+ + Y + + L K
Sbjct: 556 EMQDLGIKI--TVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCK 613
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N + E +N F+EM+ P L + I + P A+ + N ++E G+ +
Sbjct: 614 NDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCA 673
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY-----NESRSMRD 260
L+ G G++ + +EML + I+ V L + +Y NE+ ++ D
Sbjct: 674 YTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHD 730
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L R ++ A MK + P + +++ +D K+ T V +++
Sbjct: 251 VFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFE 310
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P++I YN+++ C + F + M G P+ +TY+ + + K
Sbjct: 311 EMKDAGCE--PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E FF +MI+ QP + I + A ++ + + + G+ +
Sbjct: 369 AGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLN 234
LL GL GR+ R AEE+
Sbjct: 429 YTALLDGLCEDGRM----REAEELFG 450
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 2/216 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + + + EA KF M P +++ +D K+ D +L
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G NL N++ Y A++ LC + + F ++ G + Y +F I
Sbjct: 415 SEMQQAGVNL--NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K + + + EM K +P L T I L +E E ++ + +++ G+
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
L+ +G+ ++ +EM + I I VT
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT 568
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 2/202 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
++T L+ ++EA + M P ++ + L L K + + + MV
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G L P++ YN V+G L D++ F++M G PD +TYN + + K
Sbjct: 244 VAG--LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F EM +P + + I + A E + + + G+ P + +
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361
Query: 212 LLVGLRNLGRLSDVRRFAEEML 233
L+ G L + +F +M+
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMI 383
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+F + V++Y T + G ++ + LK ++ M+ + P L +++ + +L K
Sbjct: 2 KFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKV 61
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
++ M+ G ++P+ ++Y ++ C ++ ++ FD+M PD + Y
Sbjct: 62 DDAERVLREMINQG--IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L + K+ E + F++M +P + T I + E E A + N ++++
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
G+ P + L GL LG++ EM + + + T L
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ A K F EM E+ P+ + AY + L R ++ EA K M
Sbjct: 89 GFCKLGNIQAAYKLFDEM-EKQRIVPDFI-AYTAVICGLCRCGKMMEADKVFNKMFSRGV 146
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + L + MV G L PN++ Y A+ LC VD
Sbjct: 147 EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG--LTPNVVTYTALADGLCKLGQVDTA 204
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G + TYN + L K+ + + EM P + T +
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A E+ +L+ G+ P + NVL+ G G L D R ML + I+
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 241 DVTMQKLKKAF 251
T L K +
Sbjct: 325 TTTYNSLMKQY 335
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 43/252 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G ++EA+K F +M R P+ V Y T + + ++++A M
Sbjct: 124 GLCRCGKMMEADKVFNKMFSR-GVEPDEV-TYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ D L KL +L M G G L N+ YN++V LC + ++
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQL--NICTYNSLVNGLCKSGNIRQA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN------- 173
+ ++M G +PD++T+ + + K ++ + EM+ QPT +
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299
Query: 174 -CATAITMLLDADE---------------------PEFAI--------EIWNYILENGIL 203
C + ML D + ++ I EI+ + G++
Sbjct: 300 FCMSG--MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM 357
Query: 204 PLEASANVLLVG 215
P + N+L+ G
Sbjct: 358 PDSNTYNILIKG 369
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 10/174 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ +A K EM E P+ + + T + + ++ +A + LR M
Sbjct: 229 GLCKSGNIRQAVKLMEEM-EVAGMYPD-TITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ F+ N + L D + W + GI MPN YN+++ C N++
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLA-WMLEKGI----MPNTTTYNSLMKQYCIRNNM 341
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+ M G PDS TYN++ + K + + E EM + + T
Sbjct: 342 RCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG V EA EM+E+ P V Y + L + +EA++ + MK C
Sbjct: 319 GLCNEGRVDEALDMLEEMIEK-GIEPT-VYTYTLPITALCAIEHEEEAIELVARMKKRGC 376
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L +L + L+ M+ G L+PN + YNA++ LC
Sbjct: 377 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG--LVPNTVTYNALINELCVGGRFSTA 434
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M HG+ ++ TYN I + L + + F +M+K PT + T I
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A + + + ENG P E + N L+ G G+L + +EM+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 2/229 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L G + ALK M+G + ++ + L D + L++
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ +G +P ++ YN ++ +V+N R D M +G PD TYN + K
Sbjct: 475 KMLKMG--PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ +F EM++ P P++ T I + + A+ + + E G P S
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
N ++ GL R S+ + ++M + +L +T L R+
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T LI L + + V+ A + M P+L F+ ++IL K + +
Sbjct: 210 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI--F 267
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
++L P++ Y +++ C N ++D F FD+MV G P+S+TY+ + L +V
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 327
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + EMI+ +PT IT L + E AIE+ + + G P + L+
Sbjct: 328 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 387
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
GL LG+L +ML ++ VT L
Sbjct: 388 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 94/253 (37%), Gaps = 43/253 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A+ F EMVE NP V +Y T + + +VD AL L M+ C
Sbjct: 529 GFSKWGKLESASFYFQEMVE-CGLNPNPV-SYTTLIDGHSKDGKVDIALSLLERMEEMGC 586
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PN+ YNAV+ L N
Sbjct: 587 -------------------------------------NPNVESYNAVINGLSKENRFSEA 609
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M G P+ +TY + + L +N + FH+M K + P ++ I
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRR 236
L + + A + + G+ P E + L+ G LGR+ +RR +
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729
Query: 237 ILIYDVTMQKLKK 249
Y V ++ L+K
Sbjct: 730 YRTYSVLLKGLQK 742
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 2/223 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + + V+ A + L +MK C P ++ + K +
Sbjct: 485 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 544
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G N PN + Y ++ + VD ++M G P+ +YN + L K
Sbjct: 545 EMVECGLN--PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E E +M + P + T I L +FA +I++ + + LP +
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ L+ GL G+ + +EM + + +VT L F
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V EA ++ + ++ +P+ V Y + ++ R + +D A M E C P
Sbjct: 252 KKGKVREAELILSQIFQ-YDLSPD-VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPN 309
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S ++ L + + + M+ G P + Y + LC +
Sbjct: 310 SVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE--PTVYTYTLPITALCAIEHEEEAIEL 367
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M G P+ TY + L + K+ +H+M+K P + I L
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A++I++++ +G L + N ++ GL G + E+ML L VT
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 244 MQKLKKAF 251
L +
Sbjct: 488 YNTLINGY 495
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+GF +L N ++ L V+ + QM+ G P LT+N + L K K
Sbjct: 198 GMGFGF--SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 255
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V E E ++ + + P + I + A +++ +++ G P + +
Sbjct: 256 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 315
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI--LIYDVTM 244
L+ GL N GR+ + EEM+ + I +Y T+
Sbjct: 316 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 33/244 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA K +M E+ +V+ Y T + L R + A K M+ C
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLL--PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S+ + L + + L M G L P+ + + +++ +D+
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG--LAPDEVTFTSLIDGFVVLGRIDHA 714
Query: 121 FRFFDQMVFHGAFPDSLTYNMIF-----ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
F +MV G P+ TY+++ ECL+ +KV HE + +
Sbjct: 715 FLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV----AVQHEAVYS---------- 760
Query: 176 TAITMLLDADEPEFAIEIWNYIL----ENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
E + EI + +L E G P + + L+ GL GR + + ++
Sbjct: 761 ------FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814
Query: 232 MLNR 235
M R
Sbjct: 815 MKER 818
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 2/174 (1%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C PTL +S + L + QL M GF P+ +Y +++ C N +VD
Sbjct: 784 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF--CPDREIYYSLLIAHCKNLEVD 841
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + F + G Y + L K +V E + F M++ EW + +
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
LL E + +++ + + P + +L L +G+ + A+++
Sbjct: 902 DGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 152 KEGDIRVALSVF-DAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 209
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 210 VYTYSVLINGLCKESKMDDANELFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEV 267
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P ++ T I
Sbjct: 268 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCK 327
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 328 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLS 378
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 173 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 230
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 231 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGL 290
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + S L+ G G L + M+ I + D
Sbjct: 291 CKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 350
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 351 VAYTALISGLCQEGRSI 367
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + K D + ++D + G L P+++ +N ++ D
Sbjct: 133 ECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWG--LRPSVVSFNTLMNGYIRLGD 190
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D FR M G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 191 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 250
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + A+E++ +L + P + N L+ GL G L + +EM
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ EAN EM+ R V+ Y T + +L R +V +A ++L VM E+
Sbjct: 286 GFCKKEMFEEANDLRREMLGRGAL--PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDL 343
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + +L + + L+ + NL+P+++ YN ++ C ++D
Sbjct: 344 MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK--NLVPSVVTYNTLIDGGCRTGNLDIA 401
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ HG PD +T+ ++ + + + F EM+ +P + T I
Sbjct: 402 KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L P A + + G P + NVL+ GL LG D ++M
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKM 513
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+KL + + + + M GF P+LI YN ++ LC + D+ +M G P
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFP--PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVP 520
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D +TY I + + + + E F +M+K P+ + I +FA + +
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYF 580
Query: 195 NYILENGILPLEASANVLLVGL 216
+ + + G+ P + N L+ GL
Sbjct: 581 DEMQDKGVSPNVITYNALIYGL 602
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 3/213 (1%)
Query: 36 LITLIRGKQ-VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
++ L++ K V+E + VM PT+ F+ +D K + V++ D+M G
Sbjct: 178 VLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFG 237
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ PN + YN +V L + D +QM G + TYN + K + E
Sbjct: 238 CD--PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEE 295
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ EM+ PT + T + L A + ++ ++P S N L+
Sbjct: 296 ANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIY 355
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
G LG ++ E+ ++ ++ VT L
Sbjct: 356 GYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 86 LWDIMVGIGF--NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ D++VGIG N ++ + + ++ + ++ F +MV +G PD N +
Sbjct: 120 VLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVL 179
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L V+EVE + MIK + +PT + T + E A+E+ + + G
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + S NVL+ GL G + E+M
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQM 268
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 15/263 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN EA F E+ R + V+ Y T + R +D A M
Sbjct: 356 GYSRLGNFAEALLLFSEL--RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA-VVGLLCNNNDVDN 119
P + F+ + ++ + +L+D M+ G L P+ I Y +VG L N
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG--LKPDCIAYTTRIVGELKLGNP-SK 470
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F ++M G PD +TYN++ L K + +M P + + I
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI-- 237
L + A E+++ +L+ GI P + VL+ GRL +++ +EM ++ +
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 238 -------LIYDVTMQKLKKAFYN 253
LIY + + + YN
Sbjct: 591 NVITYNALIYGLCKENMMDVAYN 613
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K GN +K FG E + E P ++ Y + L + D+A + ++ M+ E
Sbjct: 461 GELKLGN---PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P +++ + + +++ M+ G + P+++ Y ++ +D
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH--PSVVTYTVLIHSYAVRGRLDF 575
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++FD+M G P+ +TYN + L K + N F EM P I
Sbjct: 576 AKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
+ + A++++ +L+ I P + + L+ L +L V R
Sbjct: 636 ENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 9/269 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ A + +M+E +P V + + +V++AL +++ +
Sbjct: 241 GFIEEGSIEAALRVKAKMMEA-GCSPTGV-TVNVLINGYCKMGRVEDALGYIQQEIADGF 298
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + +H +++ D+M+ G + P++ YN V+ L N ++D
Sbjct: 299 EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD--PDVFTYNTVINCLSKNGELDEA 356
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QMV G PD+ T+N + L ++ E + E+ P I
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L +P I ++ + +G P E + N+L+ L ++G+L + EM R
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
+ Y+ + L KK E+ + D+ D+
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDA 505
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+V A K M++ E + V Y T + L + ++DEA + M C
Sbjct: 311 GLCQNGHVSHALKVMDLMLQ--EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + L N + L + G L P++ +N ++ LC D
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKG--LSPDVYTFNILINALCKVGDPHLG 426
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN++ + L K+ + +EM N + + T I
Sbjct: 427 IRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDA 486
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L E A E+++ + GI + N L+ GL R+ D E+M+
Sbjct: 487 LCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 4/254 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +MV+R P+ + T ++ L +++EAL R + + P
Sbjct: 349 KNGELDEAKGIVNQMVDRGCL-PD-TTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ ++ L K+ D ++L++ M G P+ + YN ++ LC+ + N
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCT--PDEVTYNILIDHLCSMGKLGNALDL 464
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M +G ++TYN I + L K ++ E E F +M + + T I L
Sbjct: 465 LNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK 524
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + A E+ +++ G+ P + N +L G + E M I VT
Sbjct: 525 AKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVT 584
Query: 244 MQKLKKAFYNESRS 257
L R+
Sbjct: 585 YGTLINGLCKAGRT 598
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 12/217 (5%)
Query: 23 EWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGENCFPT---LKFFSNALDILV 75
E + V ET TL++G ++ AL+ M C PT + N +
Sbjct: 222 EMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMG 281
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
++ D+ +Q + GF P+ + YN V LC N V + + D M+ G PD
Sbjct: 282 RVEDALGYIQQE---IADGFE--PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
TYN + CL KN ++ E + ++M+ P T I L + E A+++
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ G+ P + N+L+ L +G R EEM
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 3/209 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
P+ V Y + L ++ AL L M+ C + ++ +D L K
Sbjct: 438 CTPDEV-TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEA 496
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+++D M G + + + +N ++ LC +D+ +QMV G P+++TYN I
Sbjct: 497 EEVFDQMDAQGISR--SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
K + + + M N ++ + T I L A + A+++ + GI
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P + N ++ L L D EM
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREM 643
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 61 FPTLKFFSNALD-ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ L+ F +A+D +L +L++ T F + + +++N ++ +L + +
Sbjct: 134 YARLRRFDDAVDLVLNQLDNDT-------------FGVQADTVVFNHLLNVLVEGSKLKL 180
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +++M G PD +T N + + L + +V EM + P T +
Sbjct: 181 LESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQ 240
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
++ E A+ + ++E G P + NVL+ G +GR+ D + ++
Sbjct: 241 GFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 5/217 (2%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK---FFSNALDILVKL 77
R E + + +F+ + R ++ D+A+ + + F F++ L++LV+
Sbjct: 116 RREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEG 175
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ +++ M G G + P+++ N ++ LC + V ++M HG PD
Sbjct: 176 SKLKLLESVYNEMTGRG--IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
T+ + + I+ + +M++ PT + I E A+
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ +G P + + N + GL G +S + + ML
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 42/170 (24%)
Query: 2 WEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K+GN+ +A M FE + V+ Y T + L + + ALK LR M+ +
Sbjct: 557 YCKQGNIKKAADILETMTANGFEID---VVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT K YN V+ L N++ +
Sbjct: 614 RPTPK-------------------------------------AYNPVIQSLFRRNNLRDA 636
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIK-NKKVHEVENFFHEMIKNEWQP 169
F +M G PD+LTY ++F L + + E +F EM+ + P
Sbjct: 637 LNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 1/143 (0%)
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
++ VD V D F G D++ +N + L++ K+ +E+ ++EM QP +
Sbjct: 141 DDAVDLVLNQLDNDTF-GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
T I L A + A+ + + +G+ P E + L+ G G + R +M+
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 234 NRRILIYDVTMQKLKKAFYNESR 256
VT+ L + R
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGR 282
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V EA EM +R + P+ ++Y F+ L + +EA K M + C
Sbjct: 255 GYIGMGKVEEAFAVMEEMADR-DCAPD-TISYTMFIEALYSIGRREEAEKVFETMVEKGC 312
Query: 61 FPTLKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + +D K + +TH ++L D + PN +Y ++ ++ +
Sbjct: 313 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA-----VKPNRYIYTMIMDGFVKSSRL 367
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI--KNEWQPTPLNCA 175
+ + +++ G P ++TYN + L K KK+ E EM K E +P+ + +
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 427
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L E A ++ +++NG++P + L+ L G++S EEML
Sbjct: 428 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 487
Query: 236 RILIYDVTMQKL 247
I D T L
Sbjct: 488 GIFPDDHTYGTL 499
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 45/295 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V A F EM+ + + ++AY + + L + +VDEA K + +M
Sbjct: 150 GLCKAHKVERACDVFEEMIRK--GHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP 207
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +++ + L K V+ M + Y+ +V V+
Sbjct: 208 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD--TYSFIVTGYIGMGKVEEA 265
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP----------- 169
F ++M PD+++Y M E L + E E F M++ +P
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325
Query: 170 ----TPLNCATAITMLLD--ADEP------------------EFAIEIWNYILENGILPL 205
+ AT + L+D A +P E A+E++ IL++GILP
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRR------ILIYDVTMQKLKKAFYNE 254
+ N ++ L L ++ + EM R+ I+ Y + + L K E
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + Y A+V L + D ++++MV P LTY ++ + L K KV +
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EMI+ +P + ++ I L A + A ++ + ++ G P + ++ GL
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223
Query: 219 LGRLSDVRRFAEEM 232
GR+ + + +EM
Sbjct: 224 CGRIQEAVKTIQEM 237
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A ++++ P + Y + ++ +++EAL+ + + + P+
Sbjct: 328 KEGSMAAATHVL-RLMDKAAVKPNRYI-YTMIMDGFVKSSRLEEALELYQRILKDGILPS 385
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ L KL ++L M L P+++ Y+ ++ L + F
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 445
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ +G PD TY + + L KV EM+K P T + +L
Sbjct: 446 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR 505
Query: 184 ADEPEFAIEIWNYILENGILPLE 206
+D + A ++ ++ NG P E
Sbjct: 506 SD-VDAAWDLLQEMMRNGHTPNE 527
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 9/229 (3%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENC-------FPTLKFFSNALDILVKLNDSTHTVQLW 87
L L + +D+A+ + E C P ++ +D L K + ++ +
Sbjct: 70 ILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYY 129
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV P L+ Y +V LC + V+ F++M+ G PD + Y+ + + L
Sbjct: 130 EKMVA--SKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLS 187
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +V E MI PT + + + L + A++ + + P
Sbjct: 188 KAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 247
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ + ++ G +G++ + EEM +R ++ +A Y+ R
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 296
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + K +M++R + +P +V+ + + + ++ ++ EA + L+ M
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKR-KISP-NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N +Q+ D+M+ G + P+++ +N ++ C N +D+
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDG 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G +++TYN + + ++ K+ + F EM+ +P ++ +
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV-GLRNLGRLSDV 225
L D E E A+EI+ I E + L+ ++++ G+ N ++ D
Sbjct: 483 LCDNGELEKALEIFGKI-EKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A MVE + P V Y L + + Q A++ LR M+ N
Sbjct: 207 GKVSDAVVLIDRMVET-GFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S +D L K + L++ M GF ++I YN ++G CN D+ +
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ P+ +T++++ + +K K+ E + EM++ P + + I +
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
E AI++ + ++ G P + N+L+ G R+ D EM R ++ VT
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 246 KLKKAFYNESR 256
L + F +
Sbjct: 443 TLVQGFCQSGK 453
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 4/246 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A T G+++ + + P+ V+ + T L L +V EAL+ + M PTL +
Sbjct: 142 AFSTMGKIM-KLGYEPDTVI-FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L + V L D MV GF PN + Y V+ ++C + +M
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQ--PNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
D++ Y++I + L K+ + N F+EM ++ + T I +A +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
++ +++ I P + +VL+ G+L + + +EM+ R I +T L
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 251 FYNESR 256
F E+R
Sbjct: 378 FCKENR 383
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + + + F EM R + + Y T + + +++ A K + M
Sbjct: 412 GYCKANRIDDGLELFREMSLR--GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + LD L + ++++ + L ++ +Y ++ +CN + VD+
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL--DIGIYMIIIHGMCNASKVDDA 527
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G D+ YN++ L + + + + F +M + P L I
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L D+ A E+ + +G P + S +++ + + G L
Sbjct: 588 HLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGEL 628
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 6/194 (3%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
F + L+Y L + + G + D+A+ R M PT+ F+ + K
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE 105
Query: 82 HTVQLWDIM--VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+ L M GI ++ IM N C + F +++ G PD++ +
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINC----FCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N + L +V E M++ +PT + T + L + A+ + + ++E
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 200 NGILPLEASANVLL 213
G P E + +L
Sbjct: 222 TGFQPNEVTYGPVL 235
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+V A + M++ ++P+ V Y + + L + +V EA++ L M +C
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQE-GYDPD-VYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L K N +L ++ G ++P++ +N+++ LC +
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKG--ILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G PD TYNM+ + L K+ E N +M + + + T I
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A++ A EI++ + +G+ + N L+ GL R+ D + ++M+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + +M+ R + +P V Y T + TL + QV+EA + RV+ +
Sbjct: 339 GLCKLGEVKEAVEVLDQMITR-DCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM--------------- 98
P + F++ + L + ++L++ M G +N++
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 99 -----------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++I YN ++ C N FD+M HG +S+TYN + + L
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+++V + +MI +P + +T + + A +I + NG P
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 208 SANVLLVGLRNLGRL 222
+ L+ GL GR+
Sbjct: 577 TYGTLISGLCKAGRV 591
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L ++DEAL L+ M+ C ++ ++ +D K N + +++D M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + N + YN ++ LC + V++ + DQM+ G PD TYN + +
Sbjct: 497 EVHGVSR--NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + M N +P + T I+ L A E A ++ I GI + N
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
++ GL + ++ EML +
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ +N +V LC V + D M+ G PD TYN + L K +V E
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+MI + P + T I+ L ++ E A E+ + GILP + N L+ GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K EA + F EM + + Y T + L + ++V++A + + M E
Sbjct: 479 GFCKANKTREAEEIFDEM--EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L + D + M G P+++ Y ++ LC V+
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE--PDIVTYGTLISGLCKAGRVEVA 594
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAIT 179
+ + G YN + + L + +K E N F EM+ +NE P ++
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 180 MLLDADEP-EFAIEIWNYILENGILPLEASANVLLVGLRNL 219
L + P A++ +LE G +P +S +L GL L
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 2/212 (0%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
++PE L YE L+ L R D+ K L MK C F ++ +
Sbjct: 79 FSPEPAL-YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEI 137
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ + D M+ F L P+ YN ++ LL + N + V +M G PD T+N++
Sbjct: 138 LSVVDWMID-EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L + ++ +M P T + ++ + + A+ I ++E G
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
S NV++ G GR+ D F +EM N+
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 3/211 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + + L R Q+ A+ L M P K F+ + ++ D +++ +
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLI 147
MV G + + + N +V C V++ F +M G FPD T+N + L
Sbjct: 249 QMVEFGCSW--SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K V M++ + P + I+ L E + A+E+ + ++ P
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ N L+ L ++ + A + ++ IL
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGIL 397
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EMI P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EMLN
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLN 374
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKL 247
L + +EM+ + + +T L
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTL 317
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG V EA EM+E+ P V Y + L + +EA++ + MK C
Sbjct: 277 GLCNEGRVDEALDMLEEMIEK-GIEPT-VYTYTLPITALCAIEHEEEAIELVARMKKRGC 334
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ + L +L + L+ M+ G L+PN + YNA++ LC
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG--LVPNTVTYNALINELCVGGRFSTA 392
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M HG+ ++ TYN I + L + + F +M+K PT + T I
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A + + + ENG P E + N L+ G G+L + +EM+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A+ F EMVE NP V +Y + + +VD AL L+ M+ C
Sbjct: 487 GFSKWGKLESASFYFQEMVE-CGLNPNPV-SYTALIDGHSKDGKVDIALSLLKRMEEMGC 544
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ ++ L K N + ++ D MV G L+PN+I Y ++ LC N
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQG--LLPNVITYTTLIDGLCRNGRTQFA 602
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ F M P+ TY+ + L + K E E EM + P + + I
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ + A + +++ G P + +VLL GL+
Sbjct: 663 FVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQ 699
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T LI L + + V+ A + M P+L F+ ++IL K + +
Sbjct: 168 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI--F 225
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
++L P++ Y +++ C N ++D F FD+MV G P+S+TY+ + L +V
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + EMI+ +PT IT L + E AIE+ + + G P + L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
GL LG+L +ML ++ VT L
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 2/229 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y + L G + ALK M+G + ++ + L D + L++
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ +G +P ++ YN ++ +V+N R D M +G PD TYN + K
Sbjct: 433 KMLKMG--PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ +F EM++ P P++ I + + A+ + + E G P S
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
N ++ GL R S+ + ++M+ + +L +T L R+
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 2/223 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + + V+ A + L +MK C P ++ + K +
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G N PN + Y A++ + VD +M G P+ +YN + L K
Sbjct: 503 EMVECGLN--PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E E +M++ P + T I L +FA +I++ + + LP +
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ L+ GL G+ + +EM + + +VT L F
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 4/249 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K+G V EA ++ + ++ +P+ V Y + ++ R + +D A M E C P
Sbjct: 209 SKKGKVREAELILSQIFQ-YDLSPD-VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+S ++ L + + + M+ G P + Y + LC +
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE--PTVYTYTLPITALCAIEHEEEAIE 324
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+M G P+ TY + L + K+ +H+M+K P + I L
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A++I++++ +G L + N ++ GL G + E+ML L V
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 243 TMQKLKKAF 251
T L +
Sbjct: 445 TYNTLINGY 453
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+GF +L N ++ L V+ + QM+ G P LT+N + L K K
Sbjct: 156 GMGFGF--SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V E E ++ + + P + I + A +++ +++ G P + +
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI--LIYDVTM 244
L+ GL N GR+ + EEM+ + I +Y T+
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A F EM E+ +P ++ Y + + EA + LR M
Sbjct: 257 GLWKDGRQTDAQNLFSEMQEK-GISP-NLFTYNCMINGFCSSGRWSEAQRLLREMFERKM 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS ++ LVK +L++ M+ G ++PN I YN+++ N +D
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG--IIPNTITYNSMIDGFSKQNRLDAA 372
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F M G PD +T++++ + K+V + HEM + + T I
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A+++ ++ +G+ P + N LL GL N G+L D
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 122/282 (43%), Gaps = 19/282 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G EA + EM ER + +P+ V+ + + L++ + EA + M
Sbjct: 292 GFCSSGRWSEAQRLLREMFER-KMSPD-VVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N +++ +M G + P++I ++ ++ C VD+
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS--PDVITFSILIDGYCGAKRVDDG 407
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G +++TY + + ++ + EMI + P + C T +
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA------------NVLLVGLRNLGRLSDVRRF 228
L + + + A+E++ +++ + L+AS N+L+ GL N G+ S+
Sbjct: 468 LCNNGKLKDALEMFK-VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 229 AEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
EEM +R ++ +T + +SR FDS+ +
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 101/252 (40%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG VVEA MVE P + Y T + + + AL LR M+
Sbjct: 186 GLCREGRVVEAVALLDRMVED-GLQPNQI-TYGTIVDGMCKMGDTVSALNLLRKMEEVSR 243
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K T L+ M G + PNL YN ++ C++
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS--PNLFTYNCMINGFCSSGRWSE 301
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M PD +T++++ L+K K E E ++EM+ P + + I
Sbjct: 302 AQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + ++L+ G R+ D + EM R ++
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421
Query: 240 YDVTMQKLKKAF 251
+T L F
Sbjct: 422 NTITYTTLIHGF 433
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+A+ T + L R +V EA+ L M + P + +D + K+ D+ + L
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + + PN+++Y+A++ L + + F +M G P+ TYN +
Sbjct: 236 RKMEEVS-RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ + E + EM + + P + + I L+ + A E++N +L GI+P
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 208 SANVLLVGLRNLGRLSDVRR 227
+ N ++ G RL R
Sbjct: 355 TYNSMIDGFSKQNRLDAAER 374
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 9/236 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV---KLNDSTHTV 84
+ + Y T + + ++ AL L+ M P + + LD L KL D+
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481
Query: 85 QLW-----DIMVGIGFN-LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
++ D+ FN + P++ YN ++ L N +++M G PD++T
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
YN + + L K ++ E F M + P + T I +E++ +
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG 601
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
GI+ + L+ G +G ++ +EM++ + +T++ + +++
Sbjct: 602 RRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+I + ++ LC V D+MV G P+ +TY I + + K N
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234
Query: 159 FHEMIK-NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+M + + +P + + I L A +++ + E GI P + N ++ G
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ GR S+ +R EM R++ VT L A E +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + M P +++ +D L K + Q++D
Sbjct: 504 VQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD 563
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M GF+ P+++ + ++ C V + F +M G +++TY + +
Sbjct: 564 SMGSKGFS--PDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
++ + F EMI + P + +T L +E + A++
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP-NL 101
K +D+A+ M P + F L ++V++ + L M +P N+
Sbjct: 55 KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKME---MRRIPCNI 111
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ ++ C+ + + F ++ G P +T++ + L +V E +FFH+
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ K P + T + L A+ + + ++E+G+ P + + ++ G+ +G
Sbjct: 172 ICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L R + D +F + M G PT+ ++ +D + K D L++ M G
Sbjct: 104 LLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRG 163
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
L+P+ + YN+++ +D+ FF++M PD +TYN + C K K+ +
Sbjct: 164 --LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FF EM ++ +P ++ +T + D + A++ + + G++P E + L+
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281
Query: 215 GLRNLGRLSDVRRFAEEM 232
+G LSD R A+EM
Sbjct: 282 AYCKIGNLSDAFRLADEM 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + + F EM + P+ V+ Y T + + ++ + L+F R MK
Sbjct: 177 GYGKVGRLDDTVYFFEEM-KSMSCEPD-VITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D K + ++ + M +G L+PN Y ++V C ++ +
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG--LVPNEHTYTSLVDAYCKIGNLSDA 292
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+M G + +TY + + L +++ E E F +M+ P + I
Sbjct: 293 FRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHG 352
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ A + A+E+ + + GI P
Sbjct: 353 FVKAKNMDRALELLDEMKGRGIKP 376
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 59/135 (43%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P +++A+ +L + + + F +M FP + + N + + K ++
Sbjct: 60 VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKR 119
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
FF +MI +PT I + + E A ++ + G++P + N ++ G
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 218 NLGRLSDVRRFAEEM 232
+GRL D F EEM
Sbjct: 180 KVGRLDDTVYFFEEM 194
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y T + + + +ALKF M+ P +++ +D K+ + + +L D
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297
Query: 89 IMVGIGF---------------------------------NLMPNLIMYNAVVGLLCNNN 115
M +G ++PNL Y A++
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
++D D+M G PD L Y L +K+ +++ NE Q +
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAA-----KVVMNEMQEKGIKAN 412
Query: 176 TAI-TMLLDA 184
T I T L+DA
Sbjct: 413 TFIYTTLMDA 422
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
F L N +Y A++ LC + V+ F+QM G PD Y + + +K V
Sbjct: 478 FGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNV 535
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 8/273 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V+EA MVE E + Y T + + + D AL LR M +
Sbjct: 19 GLCREGRVLEAEALVDRMVENGHQPNE--VTYGTIVNGMCKMGDTDSALNLLRKMDESHI 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ +D L K + L+ M G + PN++ YN ++ C+ +
Sbjct: 77 KADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKG--IFPNVLTYNCMIDGCCSYGKWTDA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ PD +T+N + +K K+ E E + EM+ P + + I
Sbjct: 135 EQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A I++ ++ G P + N L+ G R+ D + EML R ++
Sbjct: 195 FCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPD 254
Query: 241 DVTMQKLKKAFYNES--RSMRDRFDSL--ERRW 269
V+ L F + +D F + + RW
Sbjct: 255 SVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRW 287
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 63/157 (40%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+++ +N ++ LC V D+MV +G P+ +TY I + K N
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+M ++ + + I L A ++ + + GI P + N ++ G +
Sbjct: 69 RKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSY 128
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G+ +D + +M+ + VT L AF E +
Sbjct: 129 GKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGK 165
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + A F + + ++ P V+++ T + I+ ++E + M+
Sbjct: 145 GFVKEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGV 202
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLA 260
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ QM+ PD +TYN + L K + + ++ EMI +P + T I
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDG 320
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 653
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 4/239 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L+ ++ ++L+ M G+ ++ ++ +D L K + H M
Sbjct: 386 GYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEM 445
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G + PNLI +N + DV V ++++ HG PD +T+++I CL + K
Sbjct: 446 QDRGIS--PNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAK 503
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + + F EM++ +P + I + +++++ + E+G+ P + N
Sbjct: 504 EIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYN 563
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLER 267
++ + ++ + ML + + T L KA R R+ F S+ER
Sbjct: 564 AIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMER 622
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 2/177 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ + TFL G V + + + C P + FS ++ L + + +
Sbjct: 453 NLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDAFDCF 512
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ G + PN I YN ++ C+ D + F M G P+ YN I +
Sbjct: 513 KEMLEWG--IKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQSFC 570
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K KKV + E M++ +P +T I L ++ A E+++ + +G +P
Sbjct: 571 KMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVP 627
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V EA + +M ER E N +V Y + + +++EALK L +M+
Sbjct: 218 GVCKKGVVDEAIRLVKQM-ER-EGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKL 275
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + + + +++++G + N + + Y+ V+ L NN+
Sbjct: 276 NPNEATIRTLVHGIFR---CLPPCEAFEVLLGFMEKNSILQRVAYDTVLYCLSNNSMAKE 332
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G PDS T+N CL+K + E F + +P +
Sbjct: 333 TALFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKPGFNGYLVLVQ 392
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
LL+A + +G+L + N ++ L R F EM +R I
Sbjct: 393 ALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFLTEMQDRGI 450
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 88 DIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
D+ I F + P+ +YNAV+ L +N ++ + F QM PD TYN++ +
Sbjct: 160 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRSDDCKPDRFTYNILIHGV 219
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K V E +M + +P I L A E A++ + + P E
Sbjct: 220 CKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEEALKQLEMMQVRKLNPNE 279
Query: 207 ASANVLLVGL 216
A+ L+ G+
Sbjct: 280 ATIRTLVHGI 289
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
MVE+ + P+ V L L + ++ +A+K + +M G P ++ + L +
Sbjct: 88 MVEKGQ-KPD-VFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRK 145
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ + +QL D M G+ N + YN++V LC + ++ + D+++ G P++
Sbjct: 146 GNVGYAMQLVDKMEEYGYPT--NTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAY 203
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY+ + E K + E E+I +P ++ +T L E AI ++ +
Sbjct: 204 TYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFREL 263
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G P S N+LL L N GR + EM
Sbjct: 264 PSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++GNV A + +M E + + P + + Y + + L + ++L+ L + + P
Sbjct: 144 RKGNVGYAMQLVDKM-EEYGY-PTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPN 201
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S L+ K + +L D ++ G PNL+ YN ++ LC ++ R
Sbjct: 202 AYTYSFLLEAAYKERGADEASKLLDEIIAKGGE--PNLVSYNVLLTGLCKEGRTEDAIRL 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G P+ ++YN++ L + E EM +E P+ + I L
Sbjct: 260 FRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLAL 319
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E A+E+ ++ P +S N ++ L G+L V + ++M+ R
Sbjct: 320 HGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYR 371
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 16/242 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +A + F E+ + ++P +V++Y L +L + +EA L M G+
Sbjct: 246 GLCKEGRTEDAIRLFRELPSK-GFSP-NVVSYNILLRSLCNEGRWEEANVLLAEMNGDER 303
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ + L + H +++ + M+ F P YN ++ LC + +D V
Sbjct: 304 SPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFK--PTASSYNPIIAHLCKDGKLDLV 361
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ DQM++ P+ TYN I L + V E + + + T IT
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A ++ + + G P + + L+ GL E MLN I I+
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGL-----------CMEGMLNEAIEIF 469
Query: 241 DV 242
V
Sbjct: 470 SV 471
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 4/224 (1%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
+ A + + EM+ R +P +V Y + ++ + L M+ C P + ++
Sbjct: 196 LSAEEVYREMI-RSRVSP-NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYN 253
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+D K+ L M G + PNLI YN ++ LC + + ++M
Sbjct: 254 TLIDAYCKMGRIDEAFGLLKSMSSKG--MQPNLISYNVIINGLCREGSMKEAWEILEEMG 311
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+ G PD +TYN + K H+ EM++N P+ + I + A
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A+E ++ + G+ P E + L+ G G L++ R EM
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 25/264 (9%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA EMVE+ P+ V++Y T + R ++D A + + M + P +S+
Sbjct: 442 EALGVVQEMVEK-GLAPD-VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L ++ T L M+ +G L P+ Y ++ C D++ D+M+
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMG--LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++TY+++ L K + E + ++I E P+ + T T++ + EF
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV---TYDTLIENCSNIEF 614
Query: 190 ------------------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
A ++ ++E P EA NV++ G G L +E
Sbjct: 615 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 674
Query: 232 MLNRRILIYDVTMQKLKKAFYNES 255
M++ + + VT+ L KA + E
Sbjct: 675 MIHSGFVPHTVTVITLIKALFKEG 698
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGN +A EMV R +P V+ Y + ++ + + ++ A++F M+
Sbjct: 328 GYCKEGNFHQALVIHAEMV-RNGVSPS-VVTYTALINSMCKARNLNRAMEFFDQMRIRGL 385
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + ++ +D + ++ + M GF+
Sbjct: 386 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 445
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L P+++ Y+ ++ C ++D F+ +MV G PD++TY+ + + L
Sbjct: 446 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 505
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ +++ E + EM+ P T I + A+ + + ++ G LP
Sbjct: 506 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 565
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ +VL+ GL R + +R +++ + DVT L
Sbjct: 566 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG++ EA + EM + + P+ V Y T L + +AL M
Sbjct: 293 GLCREGSMKEAWEILEEMGYK-GFTPDEV-TYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ ++ + K + ++ +D M G L PN Y ++ ++
Sbjct: 351 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG--LRPNERTYTTLIDGFSRQGLLNEA 408
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+R ++M G P +TYN +++ E EM++ P ++ +T I+
Sbjct: 409 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 468
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E + A ++ ++E G+ P + + L+ GL + RL++ ++EML+ +
Sbjct: 469 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPD 528
Query: 241 DVTMQKLKKAF 251
+ T L A+
Sbjct: 529 EFTYTTLINAY 539
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 6/228 (2%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+A+ + + K P + +++ LD +V+ S I + PN+ Y
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ C+ ++ F +M +G P+ +TYN + + K ++ E M
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
QP ++ I L + A EI + G P E + N LL G G
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337
Query: 225 VRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
EM ++ ++ Y + + KA N +R+M + FD + R
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKA-RNLNRAM-EFFDQMRIR 383
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V +A + F +M R + P+ V Y T + L + ++DEA+ L M+ + CFP+
Sbjct: 211 KVGLVDDAIQVFRDMTIR-KCEPD-VYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPS 268
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ ++ L K D + +L D M G +PN + YN ++ LC ++
Sbjct: 269 PVTFNVLINGLCKKGDLSRAAKLVDNMFLKG--CIPNEVTYNTLIHGLCLKGKLEKAISL 326
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+MV P+ +TY I L+K + + M + + +T I+ L
Sbjct: 327 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFK 386
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A+ ++ + G + ++ GL G+ D EM N+ T
Sbjct: 387 EGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYT 446
Query: 244 MQKLKKAFYNESRSMR 259
L K F+ S R
Sbjct: 447 CSSLMKGFFEAGNSHR 462
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVD 118
C T K F++ L+++++ ++ ++ ++G G ++ PN++ +N V+ +C VD
Sbjct: 157 CKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVD 216
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + F M PD TY + + L K ++ E + EM + P+P+ I
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 276
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + A ++ + + G +P E + N L+ GL G+L + M++ + +
Sbjct: 277 NGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCV 336
Query: 239 IYDVTMQKLKKAFYNESRSM 258
VT + + R++
Sbjct: 337 PNVVTYGTIINGLVKQGRAL 356
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 2/205 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+VL + + + + VD+A++ R M C P + + +D L K + V L
Sbjct: 198 NVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLL 257
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G P+ + +N ++ LC D+ + D M G P+ +TYN + L
Sbjct: 258 DEMQIDG--CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ + + M+ ++ P + T I L+ + + E G E
Sbjct: 316 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEY 375
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ L+ GL G+ + +EM
Sbjct: 376 VYSTLISGLFKEGKSQEAMHLFKEM 400
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G++ A K M + P V Y T + L ++++A+ L M C
Sbjct: 278 GLCKKGDLSRAAKLVDNMFLK-GCIPNEV-TYNTLIHGLCLKGKLEKAISLLDRMVSSKC 335
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + ++ LVK + + +M G+ + N +Y+ ++ L
Sbjct: 336 VPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV--NEYVYSTLISGLFKEGKSQEA 393
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G +++ Y+ + + L ++ K + EM P C++ +
Sbjct: 394 MHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKG 453
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+A A+E+W + ++ E +VL+ GL G++ + +ML +
Sbjct: 454 FFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGK 508
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G KEG EA F EM V+ +E N + Y + L R + D+A++ L M +
Sbjct: 383 GLFKEGKSQEAMHLFKEMTVKGYELN---TIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG 439
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG--------------------------- 92
C P S+ + + +S V++W M
Sbjct: 440 CTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAM 499
Query: 93 ------IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG--AFPDSLTYNMIFE 144
+G P+++ Y++++ L V++ + +++M+ G + PD +TYN++
Sbjct: 500 MVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLN 559
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
L K + + + M+ P + C + ML + +P
Sbjct: 560 TLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDP 602
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 10/229 (4%)
Query: 28 HVLAYETFLITLIR-GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
+V+ Y T + L++ G+ +D A L +M+ +S + L K S + L
Sbjct: 338 NVVTYGTIINGLVKQGRALDGAC-VLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHL 396
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M G+ L N I+Y+AV+ LC + D+ +M G P++ T + + +
Sbjct: 397 FKEMTVKGYEL--NTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ H + +M K+ + + + I L + + A+ +W +L G P
Sbjct: 455 FEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR------RILIYDVTMQKLKK 249
+ + ++ GL G + D + EML + ++ Y++ + L K
Sbjct: 515 VAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCK 563
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ N++EA + F EM R P+ ++++ + + L R + +AL R M+ P
Sbjct: 374 RRDNILEAQEIFDEMSRRGVL-PD-LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D + + +++ D M+ G + +++ YN + LC +
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFM--DVVTYNTFLNGLCKKKMFADADML 489
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G PD T+ + K+ + + N F M++ +P + T I
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E A E+W+ ++ I+P S +L G + G L + ++ML + I VT
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 244 MQKLKKAFYNESRSMRDRFDSLER 267
L K Y S M ++ L +
Sbjct: 610 CNTLIKG-YCRSGDMPKAYEYLSK 632
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + +A K EM+ R + V+ Y TFL L + K +A M
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCF--MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + K + + L++ MV NL P+ + YN ++ C ++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D M+ PD ++Y + + + E N +M++ +P + C T I
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A E + ++ NGI+P S N L+ G L EM R +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 241 DVTMQKLKKAFYNESR 256
+T + F E +
Sbjct: 677 IITYNLILNGFCAEGK 692
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A EM++ P + Y T L+ + R + EA + M
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQ-LGLTP-NAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L FS+ + +L + + + M G ++P+ ++Y ++ C N + +
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSG--IVPDNVIYTILIDGFCRNGALSDA 451
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M+ G F D +TYN L K K + + F+EM++ P T I
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ ++ ++ + P + + N L+ G G + + ++M+ + I+
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G K+ +A+ F EMVER V + TF TLIRG +D+AL M
Sbjct: 476 GLCKKKMFADADMLFNEMVER-----GMVPDFYTF-TTLIRGYCKDGNMDKALNLFEAMV 529
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P ++ +D K + +LWD M I +++P+ I Y V+ C++
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM--IRKDIIPDHISYGTVLNGFCSSGL 587
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ DQM+ G P+ +T N + + ++ + + + +MI N P + T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L E A + N + + G+ + N++L G G++ + AE++L +
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE----AEQVLRKM 703
Query: 237 ILI 239
I I
Sbjct: 704 IEI 706
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L Y+ + T ++ K++ E + ++++ + ++ + L LV+ +++
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+V G L N+ N +V LC + +NV F M G F D +TYN + +
Sbjct: 248 VVRGGIEL--NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V E + +P L + L + + A ++ +L+ G+ P A+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N LLV + + + + +EM R +L
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVL 394
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + + +M+ R + P+H+ +Y T L + EAL M +
Sbjct: 546 GFCKAGEMGRAKELWDDMI-RKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + + + D + M+ G ++P+ YN ++ +++
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG--IIPDSFSYNTLIDGYLKEANLEKA 661
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++M G + +TYN+I K+ E E +MI+ P ++ I
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ D + A + +L+ G++P
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + +++ YN ++ C V+ F+ + G P LTYN I L K K
Sbjct: 285 GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ EM++ P T + + D A EI++ + G+LP S + L+
Sbjct: 345 RAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKL-KKAFYNESRSMRD 260
L G L EM I +IY + + + +++ MRD
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 8/231 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+ NV +A +M+ER + P+ V+ Y + + R D A + L +M P
Sbjct: 440 KSNVHKAMGVLNKMLER-KVLPD-VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+++ +D L K L+D + G N PN++MY A++ C VD
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN--PNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M+ P+SLT+N + L + K+ E +M+K QPT I LL
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A + +L +G P + + GRL D AE+M+ +
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD----AEDMMAK 662
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 4/248 (1%)
Query: 20 ERFEWNPEHVLA-YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
ERFE + ++ Y T L +L R VDE + M + P + ++ ++ KL
Sbjct: 173 ERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ Q +V G + P+ Y +++ C D+D+ F+ F++M G + +
Sbjct: 233 NVEEANQYVSKIVEAGLD--PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
Y + L +++ E + F +M +E PT I L ++ A+ + +
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
E GI P + VL+ L + + R +ML + ++ +T L Y + +
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING-YCKRGMI 409
Query: 259 RDRFDSLE 266
D D +E
Sbjct: 410 EDAVDVVE 417
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 38/303 (12%)
Query: 1 GWEKEGNVVEANKTFGEMVER----------------------------FEWNP-----E 27
G+ K GNV EAN+ ++VE F P
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ +AY + L +++DEA+ MK + CFPT++ ++ + L + + L
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G PN+ Y ++ LC+ + QM+ G P+ +TYN +
Sbjct: 347 KEMEETGIK--PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + + M + P I ++ + A+ + N +LE +LP
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVV 463
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
+ N L+ G G R M +R ++ T + + R D FDSL
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 266 ERR 268
E++
Sbjct: 524 EQK 526
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V EA F + +E+ NP +V+ Y + + +VDEA L M +NC P
Sbjct: 509 KSKRVEEACDLF-DSLEQKGVNP-NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + L L + MV IG L P + ++ L + D D+ +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIG--LQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM+ G PD+ TY + + ++ + E+ +M +N P ++ I D
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 184 ADEPEFAIEIWNYILENGILP 204
+ FA ++ + + G P
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEP 705
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + G+M+E+ +V+ Y + + +++A+ + +M+ P + ++
Sbjct: 376 KARELLGQMLEKGLM--PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ K N L ++ ++P+++ YN+++ C + + D+ +R M
Sbjct: 434 LIKGYCKSNVHKAMGVLNKML---ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD TY + + L K+K+V E + F + + P + I A + +
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A + +L LP + N L+ GL G+L + E+M+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ N++EA + F EM R P+ ++++ + + L R + +AL R M+ P
Sbjct: 374 RRDNILEAQEIFDEMSRRGVL-PD-LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D + + +++ D M+ G + +++ YN + LC +
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFM--DVVTYNTFLNGLCKKKMFADADML 489
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G PD T+ + K+ + + N F M++ +P + T I
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E A E+W+ ++ I+P S +L G + G L + ++ML + I VT
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 244 MQKLKKAFYNESRSMRDRFDSLER 267
L K Y S M ++ L +
Sbjct: 610 CNTLIKG-YCRSGDMPKAYEYLSK 632
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + +A K EM+ R + V+ Y TFL L + K +A M
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCF--MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + K + + L++ MV NL P+ + YN ++ C ++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D M+ PD ++Y + + + E N +M++ +P + C T I
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A E + ++ NGI+P S N L+ G L EM R +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Query: 241 DVTMQKLKKAFYNESR 256
+T + F E +
Sbjct: 677 IITYNLILNGFCAEGK 692
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A EM++ P + Y T L+ + R + EA + M
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQ-LGLTP-NAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L FS+ + +L + + + M G ++P+ ++Y ++ C N + +
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSG--IVPDNVIYTILIDGFCRNGALSDA 451
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M+ G F D +TYN L K K + + F+EM++ P T I
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ ++ ++ + P + + N L+ G G + + ++M+ + I+
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G K+ +A+ F EMVER V + TF TLIRG +D+AL M
Sbjct: 476 GLCKKKMFADADMLFNEMVER-----GMVPDFYTF-TTLIRGYCKDGNMDKALNLFEAMV 529
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P ++ +D K + +LWD M I +++P+ I Y V+ C++
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM--IRKDIIPDHISYGTVLNGFCSSGL 587
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ DQM+ G P+ +T N + + ++ + + + +MI N P + T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L E A + N + + G+ + N++L G G++ + AE++L +
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE----AEQVLRKM 703
Query: 237 ILI 239
I I
Sbjct: 704 IEI 706
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L Y+ + T ++ K++ E + ++++ + ++ + L LV+ +++
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+V G L N+ N +V LC + +NV F M G F D +TYN + +
Sbjct: 248 VVRGGIEL--NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V E + +P L + L + + A ++ +L+ G+ P A+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N LLV + + + + +EM R +L
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVL 394
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + + +M+ R + P+H+ +Y T L + EAL M +
Sbjct: 546 GFCKAGEMGRAKELWDDMI-RKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + + + D + M+ G ++P+ YN ++ +++
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG--IIPDSFSYNTLIDGYLKEANLEKA 661
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++M G + +TYN+I K+ E E +MI+ P ++ I
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ D + A + +L+ G++P
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + +++ YN ++ C V+ F+ + G P LTYN I L K K
Sbjct: 285 GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ EM++ P T + + D A EI++ + G+LP S + L+
Sbjct: 345 RAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKL-KKAFYNESRSMRD 260
L G L EM I +IY + + + +++ MRD
Sbjct: 405 GVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + + F + + ++ P V+++ T + IR +D+ + M P
Sbjct: 148 KEGEIRLSQSVF-DAIRKWGLRPS-VVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDEANELFXEMLDKG--LVPNGVTFTTLIDGHCKNGKVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + N +EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E ++E I + + L+ GL GR D + EML+
Sbjct: 324 DGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G + EM++R P+ V + T + IR ++DEA+K +V+ +
Sbjct: 459 GLCKKGRIPAMKLLLSEMLDR-NVQPD-VYVFATLIDGFIRNGELDEAIKIFKVIIRKGV 516
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K T + + M + + P+ Y+ V+ +D+ +
Sbjct: 517 DPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSV--HHAPDEYTYSTVIDGYVKQHDMSSA 574
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F QM+ H P+ +TY + K + E F M + P + T +
Sbjct: 575 LKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGG 634
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A +PE A I+ +L NG LP +A+ + L+ GL N + + N R LI
Sbjct: 635 FFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLIL 694
Query: 241 D 241
D
Sbjct: 695 D 695
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V EA + M E P+ + Y + +G +++EA + L K P
Sbjct: 322 KYGLVTEAAEMLRRMAE-MGCGPD-ITTYNIMINFSCKGGRIEEADELLEKAKERGLLPN 379
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K D + + IG +L+ Y A + + ++D
Sbjct: 380 KFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK--SDLVSYGAFIHGVVVAGEIDVALMV 437
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M+ G FPD+ YN++ L K ++ ++ EM+ QP AT I +
Sbjct: 438 REKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIR 497
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E + AI+I+ I+ G+ P N ++ G G+++D EM
Sbjct: 498 NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEM 546
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 93/237 (39%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ A + E+ + + V Y + + + + + L M
Sbjct: 249 GYCKKGDLQCATRALNEL--KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 306
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+K F+N +D K T ++ M +G P++ YN ++ C ++
Sbjct: 307 NMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCG--PDITTYNIMINFSCKGGRIEEA 364
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ G P+ +Y + K + + + + ++ I
Sbjct: 365 DELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHG 424
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ A E + A+ + ++E G+ P N+L+ GL GR+ ++ EML+R +
Sbjct: 425 VVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNV 481
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 22/197 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ +++ A K F M + F+ P +V+ Y T + + + + A +M C
Sbjct: 599 GFCKKADMIRAEKVFSGM-KSFDLVP-NVVTYTTLVGGFFKAGKPERATSIFELMLMNGC 656
Query: 61 FP---TLKFFSNALD------ILVKLNDSTHT-----VQLWDIMVGIGFNLMPNLIMYNA 106
P T + N L +L++ DS + + +M+ G++ + + YN+
Sbjct: 657 LPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQV--IAAYNS 714
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
V+ LC + VD +M+ G DS+ + + L K E N +I +
Sbjct: 715 VIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRN----IISCD 770
Query: 167 WQPTPLNCATAITMLLD 183
L A ++ LD
Sbjct: 771 LNKIELQTAVKYSLTLD 787
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A F +M E P +V+ Y + +L + K V+EAL MK +
Sbjct: 209 GLCKIGETTAAAGLFKKM-EEAGCQP-NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRI 266
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L L + M + N+MPN+ +N +V +C V
Sbjct: 267 SPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL--NIMPNIFTFNVLVDAICKEGKVSEA 324
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G PD +TY+ + ++ E F MI +P + I
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A +++N ++ G+ P + N L+ GL LGRL + + + M
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A F +M+ + P+ V + T + L + + +A++F + C PT+ ++
Sbjct: 149 AFSVFSKMI-KLGLQPDAV-TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTI 206
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L K+ ++T L+ M G PN++ YN ++ LC + V+ F M
Sbjct: 207 INGLCKIGETTAAAGLFKKMEEAG--CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
PD TYN + + L ++ E +EM P + + + A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ + E G+ P + + L+ G + + R+ + M+ +
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 5/251 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIR-GKQVDEALKFLRVMKGENCFPTLK 65
N+ +A +F M+ R E P ++ + L +++ G+ + + M+ P +
Sbjct: 74 NIDDALASFNHMLHR-EPLP-CIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIY 131
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
S +D L ++ M+ +G L P+ + +N ++ LC FFD
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLG--LQPDAVTFNTLINGLCKVGKFAQAVEFFD 189
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
G P TY I L K + F +M + QP + I L
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDK 249
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
A++I++Y+ I P + N L+ GL N R + EM + I+ T
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309
Query: 246 KLKKAFYNESR 256
L A E +
Sbjct: 310 VLVDAICKEGK 320
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +VEA K F M+ + P+ +Y + + K++DEA + M +
Sbjct: 349 GYSLRMEIVEARKLFDAMITK-GCKPD-AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL 406
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L +L L+ M G NL P+L Y+ ++ C +
Sbjct: 407 TPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG-NL-PDLFTYSMLLDGFCKEGYLGKA 464
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR F M PD YN++ + + K + + F E+ P T I
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L + A+E + + +G P E S NV++ G S + EM +R
Sbjct: 525 LCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 2/184 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
++VD A M P F+ ++ L K+ V+ +D G P +
Sbjct: 144 QRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG--CQPTVY 201
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
Y ++ LC + F +M G P+ +TYN++ + L K+K V+E + F M
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P + I L + + A + N + I+P + NVL+ + G++
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321
Query: 223 SDVR 226
S+ +
Sbjct: 322 SEAQ 325
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 46/302 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV-DEALKFLRV--MKGENC 60
+ G + EA KTF EM+ R +P + T + + + K++ D L F R+ MK C
Sbjct: 278 RSGMLDEACKTFEEMISR--NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L+ ++ +D L K +L + M G L P+++ Y+A+V LC +D
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG--LSPDVVTYSALVDGLCKLGKLDRA 393
Query: 121 FRFFDQMVFHGAFPDS-----------------------------------LTYNMIFEC 145
++M G FPDS +TYN + +
Sbjct: 394 CDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDG 453
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K ++ E F +M+ + P + IT L + + A I+ +++ G+LP
Sbjct: 454 LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD 513
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
+ LL GL G + A E+L + D M K+ ++ D + +
Sbjct: 514 TVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVV 569
Query: 266 ER 267
ER
Sbjct: 570 ER 571
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+ L L + +VD AL L MK P L ++ LD L K + MV
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
P++ Y ++ LC + F +MV G PD++ Y+ + + L +N
Sbjct: 474 --KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG--- 528
Query: 154 EVENFFHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+E+ E++K +P + + L A + E A E+ + + G P +A +
Sbjct: 529 -LEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAG-FPADAFTYIS 586
Query: 213 LV-GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+V GLR LG++ R+ ++ + ++M+K
Sbjct: 587 VVSGLRKLGKVDKARQLVDDASETHTSVERLSMEK 621
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNL 97
L R +DEA K M N P+ + F+ + + K V L+ M + F
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN +V LC +D ++M +G PD +TY+ + + L K K+ +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EM K P A+ + L A + ++A+ + G P + N LL GL
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC 455
Query: 218 NLGRLSDVRRFAEEMLNRRI 237
GR+ + F +M+ +
Sbjct: 456 KAGRIDEAITFLAKMVAAKC 475
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK-GEN 59
G K G + +A + G++ R +V+ Y + + +VD+AL+ + M G
Sbjct: 82 GLCKAGELDKAKELLGQL--RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGG 139
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F++ L L + L++ M G PN+I Y+ ++ LC +D
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE--PNVISYSTLLDGLCKAGRLDE 197
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +++MV PD + Y L K +V E + +M+ + + +T I
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 180 MLLDADEPEFAI-EIWNYILENGIL 203
+L E A ++ ++ +G+L
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGML 282
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V++Y T L L + ++DEA + M ++C P L +++ + L K N
Sbjct: 178 NVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND-----------------VDNVFRFFDQMVFH 130
MV G + + ++ V+G+LC +D + F++M+
Sbjct: 238 RKMVTKGSK--ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISR 295
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM---LLDADEP 187
P + +N + + K+K++ + F M + P N T M L A +
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A E+ N + G+ P + + L+ GL LG+L EEM
Sbjct: 356 DEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 9/237 (3%)
Query: 6 GNVVEANKTFGEMVERFEW-----NPEH-VLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G V+ +V F+W +H V Y FL L + A + + M+
Sbjct: 9 GEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRG 68
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P +S L L K + +L + G L N+I Y+ V+ C + VD+
Sbjct: 69 YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKL--NVITYSVVIDGCCKASRVDD 126
Query: 120 VFRFFDQMVFHGA-FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M G PD +T+N + + L +++ E F M K +P ++ +T +
Sbjct: 127 ALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L A + A +W ++E +P + + GL R+++ +M+ +
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 135 KEGDIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPD 192
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 251 YKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 310
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 311 EGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 361
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 156 PSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 213
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T L
Sbjct: 214 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGL 273
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G + + M+ I + D
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDD 333
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 334 VVYTALISGLCQEGRSV 350
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 101 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG--LRPSV 158
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 159 VSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 218
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L GL G
Sbjct: 219 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGD 278
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 279 LKQAHDLIDEM 289
>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ +A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDKAVSVLNGMIKSGCKPNAHV--YNTLVNGLVGVSKFEDAIRVFREMGTVHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G N P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLN--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 40/181 (22%)
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+N S H +++ + G+ + Y+A++ LC ++D + M+ G P++
Sbjct: 110 INKSLHVLEMAEQKGGV-----LDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNA 164
Query: 137 -----------------------------------LTYNMIFECLIKNKKVHEVENFFHE 161
+TYN + L KN+ E N E
Sbjct: 165 HVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
++ P + + + L + E A+++WN + G P N+L+ GL ++G+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGK 284
Query: 222 L 222
+
Sbjct: 285 M 285
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRLAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L+ GL GR D + EML+
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQAHHLIDEM 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + +
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 59/139 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 260 NGRVDLAMEIYKQMLSQSL 278
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 46/302 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV-DEALKFLRV--MKGENC 60
+ G + EA KTF EM+ R +P + T + + + K++ D L F R+ MK C
Sbjct: 278 RSGMLDEACKTFEEMISR--NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L+ ++ +D L K +L + M G L P+++ Y+A+V LC +D
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG--LSPDVVTYSALVDGLCKLGKLDRA 393
Query: 121 FRFFDQMVFHGAFPDS-----------------------------------LTYNMIFEC 145
++M G FPDS +TYN + +
Sbjct: 394 CDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDG 453
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K ++ E F +M+ + P + IT L + + A I+ +++ G+LP
Sbjct: 454 LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPD 513
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
+ LL GL G + A E+L + D M K+ ++ D + +
Sbjct: 514 TVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVV 569
Query: 266 ER 267
ER
Sbjct: 570 ER 571
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNL 97
L R +DEA K M N P+ + F+ + + K V L+ M + F
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN +V LC +D ++M +G PD +TY+ + + L K K+ +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EM K P A+ + L A + ++A+ + G P + N LL GL
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC 455
Query: 218 NLGRLSDVRRFAEEMLNRRI 237
GR+ + F +M+ +
Sbjct: 456 KAGRIDEAITFLAKMVAAKC 475
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+ L L + +VD AL L MK P L ++ LD L K + MV
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
P++ Y ++ LC + F +MV G PD++ Y+ + + L +N
Sbjct: 474 --KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG--- 528
Query: 154 EVENFFHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+E+ E++K +P + + L A + E A E+ + + G P +A +
Sbjct: 529 -LEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAG-FPADAFTYIN 586
Query: 213 LV-GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+V GLR LG++ R+ ++ + ++M+K
Sbjct: 587 VVRGLRKLGKVDKARQLVDDASETHTSVERLSMEK 621
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK-GEN 59
G K G + +A + G++ R +V+ Y + + +VD+AL+ + M G
Sbjct: 82 GLCKAGELDKAKELLGQL--RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGG 139
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + F++ L L + L++ M G PN+I Y+ ++ LC +D
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE--PNVISYSTLLDGLCKAGRLDE 197
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +++MV PD + Y L K +V E + +M+ + + +T I
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 180 MLLDADEPEFAI-EIWNYILENGIL 203
+L E A ++ ++ +G+L
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGML 282
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V++Y T L L + ++DEA + M ++C P L +++ + L K N
Sbjct: 178 NVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND-----------------VDNVFRFFDQMVFH 130
MV G + + ++ V+G+LC +D + F++M+
Sbjct: 238 RKMVTKGSK--ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISR 295
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM---LLDADEP 187
P + +N + + K+K++ + F M + P N T M L A +
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A E+ N + G+ P + + L+ GL LG+L EEM
Sbjct: 356 DEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 9/237 (3%)
Query: 6 GNVVEANKTFGEMVERFEW-----NPEH-VLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G V+ +V F+W +H V Y FL L + A + + M+
Sbjct: 9 GEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRG 68
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P +S L L K + +L + G L N+I Y+ V+ C + VD+
Sbjct: 69 YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKL--NVITYSVVIDGCCKASRVDD 126
Query: 120 VFRFFDQM-VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M G PD +T+N + + L +++ E F M K +P ++ +T +
Sbjct: 127 ALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L A + A +W ++E +P + + GL R+++ +M+ +
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+++A + F EM + ++++ + L + +D+ALK+ R MK P
Sbjct: 217 NMMDAERIFDEMPS--QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 274
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ + + + +++ D M+ G L +++ YN ++ LC + F +
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVL--DVVTYNTILNGLCKEKMLSEADELFTE 332
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G FPD T+ + K+ +++ F MI+ +P + T I E
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E E+WN ++ I P S +L+ G N+G +S+ R +EM+ + +T
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 247 LKKAFYNESRSMR-DRFDS 264
+ K + +++ D F S
Sbjct: 453 IVKGYCRAGNAVKADEFLS 471
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA K EM+E + V+ Y T L L + K + EA + M
Sbjct: 281 GFCRNGVMSEALKVRDEMLE--QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP F+ ++ K + V L+++M I NL P+++ YN ++ C ++++ V
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ M+ +P+ ++Y ++ V E + EM++ ++ T + C T +
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A A E + +L GI+P + N L+ G + +M N +L
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Query: 241 DVTMQKLKKAFYNESR 256
+T + F + R
Sbjct: 517 VITYNVILNGFSRQGR 532
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G KE + EA++ F EM ER + P+ + TF TLI G D +A+ +M
Sbjct: 316 GLCKEKMLSEADELFTEMTERGVF-PD----FYTF-TTLINGYSKDGNMNKAVTLFEMMI 369
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + ++ +D K ++ +LW+ M I + PN I Y ++ CN
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGC 427
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FR +D+MV G +T N I + + + + F M+ P + T
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + + + A + N + +G+LP + NV+L G GR+ + +M+ R
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 237 I----------LIYDVTMQKLKKAF 251
+ + VT LK+AF
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAF 572
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + ++++ FL M+ + FP + ++ ++ + +L D M G G L
Sbjct: 106 ALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG--L 163
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P + YNA++ LC D+M+ G PD+ TYN++ +N + + E
Sbjct: 164 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 223
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM P ++ + I +L + A++ + + G+ P +L+ G
Sbjct: 224 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 283
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
G +S+ + +EML + ++ VT + E
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GN+ +A F M++R P+ V+ Y T + +G ++++ + M
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQR-NLKPD-VVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ + + +LWD MV GF +I N +V C +
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE--ATIITCNTIVKGYCRAGNAVKA 466
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G PD +TYN + IK + + ++M + P + +
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A I ++E G+ P ++ L+ G L + R +EML R
Sbjct: 527 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L ++ + T ++ +++ E + RV+K + ++ ++ L LVK+ +++
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+V G + N+ N ++ LC N ++N F M G FPD +TYN + +
Sbjct: 88 VVRSGVQV--NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E M +P I L + A + + +L+ G+ P A+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N+LLV + D R +EM ++ ++
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVV 234
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 4/252 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G + +A K F +M + P++V+ Y + R + EALK M + C
Sbjct: 248 SKNGCLDQALKYFRDM-KNAGLAPDNVI-YTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L+ L K + +L+ M G + P+ + ++ + +++
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERG--VFPDFYTFTTLINGYSKDGNMNKAVT 363
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+ M+ PD +TYN + + K ++ +V +++MI P ++ I
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ A +W+ ++E G + N ++ G G F ML + I+ +
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483
Query: 243 TMQKLKKAFYNE 254
T L F E
Sbjct: 484 TYNTLINGFIKE 495
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN+ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 137 KEGNIRVAQSVF-DAITKWGLRPS-VVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPD 194
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K +L+D M+ G L+P + + ++ C N VD
Sbjct: 195 VYTYSVLINGLCKEXKMDEANELFDEMLVXG--LVPXGVTFTTLIDGHCKNGRVDLAMEI 252
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + EM +P + T I
Sbjct: 253 YKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCK 312
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 313 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 363
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ G V+EA + M E FE N V+AY T + L ++ EA+ M+
Sbjct: 328 GYFMRGRVLEALNIWNRMAEEGFEPN---VVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + + +D K D ++W+ M+ G +PN+++Y ++V +LC ++
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG--CIPNVVVYTSMVNVLCRSSMFSQ 442
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M P+++T+N + L + +V N F +M + P +
Sbjct: 443 AWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLD 502
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
LL + + A+E+ + E G+ + N + G N+G+ + + +ML +
Sbjct: 503 GLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562
Query: 240 YDVTMQKLKKAFYNESR 256
+T L A+ + +
Sbjct: 563 DAITYNTLTYAYCMQGK 579
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 4/203 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + + TF+ L +V+ A+ M+ C P +K ++ LD L+K N ++
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L M G L NL+ YN + G CN + + +M+ G PD++TYN +
Sbjct: 516 LVTEMEEKGMEL--NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYA 573
Query: 146 LIKNKKVHEVENFFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
KV ++ +W P + + + + E A+ + +L GI
Sbjct: 574 YCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICL 633
Query: 205 LEASANVLLVGLRN-LGRLSDVR 226
A+ N L+ GL N LG L +
Sbjct: 634 NAATWNALVRGLFNSLGHLGPIH 656
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 7/205 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y L L + +VD A K L M + C P + ++ + + KL +L
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL- 241
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
PN+ +YNA++ C V VF QMV G P+ +TY+ + L
Sbjct: 242 ------SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + +M P + + A+ IWN + E G P
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ GL + G++ + + +M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKM 380
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 96/259 (37%), Gaps = 40/259 (15%)
Query: 27 EHVLAYETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E + E I +I R ++ALK ++ C PT+K +++ LD ++ N
Sbjct: 108 EGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQM 167
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++ M G PN+ YN ++ LC NN VD + +M G PD ++Y +
Sbjct: 168 IEPIYSNMKRDGKE--PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTV 225
Query: 143 FECLIKNKKVHEVEN------------------------------FFHEMIKNEWQPTPL 172
+ K KV E +M++ P +
Sbjct: 226 ISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRF 228
+T I+ L E A+ +W + G P + L+ G GR+ + R
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
Query: 229 AEEMLNRRILIYDVTMQKL 247
AEE ++ Y+ + L
Sbjct: 346 AEEGFEPNVVAYNTLIHGL 364
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 9/202 (4%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G V EA E+ RF+ N V Y + R +V E L M + P
Sbjct: 230 SKLGKVEEAR----ELSIRFQPN---VSVYNALINGFCREYKVKEVFLLLGQMVEKGIDP 282
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S + L + + + +W M G + PN+ + +++ V
Sbjct: 283 NVITYSTVISSLSGIGNVELALAVWAKMFVRGCS--PNVYTFTSLMKGYFMRGRVLEALN 340
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+++M G P+ + YN + L + K+ E + +M +N P I
Sbjct: 341 IWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFA 400
Query: 183 DADEPEFAIEIWNYILENGILP 204
A + A EIWN ++ NG +P
Sbjct: 401 KAGDLVGASEIWNKMMTNGCIP 422
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 105/235 (44%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V EA K + EM R+ P+ V+++ + R ++D A +LR MKG
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRY-VTPD-VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + + +++ D MVG F +P+++ YN ++ LC + + +
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG--FGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G PD T+ + + F +++ +P + + I
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A E+W+ + ILP + ++L+ G++ D F +EM+ +
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKK 501
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ +++A K EM ER P+ + + T + R + AL+ + +
Sbjct: 376 GLCKQHRLLDAEKLLNEMEER-GVTPD-LCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D + + D +LWD M ++PN I Y+ ++ C V++
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHA--REILPNHITYSILIDSHCEKGQVEDA 491
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F D+MV G P+ TYN I + ++ V + + F +M ++ P + T I
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A ++N + + + P + N+++ G G + D R + M
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGM 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ +AN+ + +M R E P H+ Y + + QV++A FL M +
Sbjct: 446 GMCRKGDLAKANELWDDMHAR-EILPNHI-TYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +++ + + + Q M N+ P+LI +N ++ ++
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD--NVFPDLITFNTLIHGYIKEENMHGA 561
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F+ M PD++TYNMI + + + F M + +P + I
Sbjct: 562 FNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ A + A ++ + ++ G P
Sbjct: 622 HVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 4/227 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ EM +R + P+ V+ + + R VD A+ + M P + +++
Sbjct: 176 ADTVISEMEKRCVF-PD-VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L L K +++ M ++ P++ +N ++G C +V +F+ +M
Sbjct: 234 LKGLCKHRRFDKAKEVFRTMDQC--SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
PD ++++ + + ++ + EM P + I A A
Sbjct: 292 YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + + ++ G LP + N LL GL RL D + EM R +
Sbjct: 352 LRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 2/206 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
++ + T + ++ EA + R++ ++ P SNAL ++ H Q +V
Sbjct: 90 FDLLIRTYTQSRKPREAFEAFRLLL-DHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + N N +V C + D +M FPD +T+N++ + +
Sbjct: 149 -LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V M +P + + + L + A E++ + + + P S N+
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ G +G + + +F +EM +R +
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYV 293
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 43/289 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A F +M E P+ V+ Y T + +L + ++V+EAL MK +
Sbjct: 236 GLCKIGETVAAAGLFRKMGEA-GCQPD-VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI 293
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV--- 117
P + +++ + L + + + M+ + N+MPN++ ++ ++ + C +V
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL--NIMPNIVTFSLLINIFCKEGNVFEA 351
Query: 118 -------------DNVF-------------------RFFDQMVFHGAFPDSLTYNMIFEC 145
NV + FD M+ G PD +YN++
Sbjct: 352 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILING 411
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K K++ E + F+EMI P ++ T I L A +++ +L NG LP
Sbjct: 412 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD 471
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL G G L+ R M L +++Y++ + + K+
Sbjct: 472 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + VVEA K F M+ + P+ V +Y + + K++ EA + M +
Sbjct: 376 GYSLQAEVVEARKLFDVMITK-GCKPD-VFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L +L L+ M+ G NL P+L Y+ ++ C +
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG-NL-PDLCTYSILLDGFCKQGYLAKA 491
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR F M P+ + YN++ + + K++ + E F E+ QP T I
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
L + A+E + + E+G P E S NV++ G
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 75/203 (36%), Gaps = 15/203 (7%)
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
NCF L+ +L K+ I L ++ +N ++ LC
Sbjct: 165 NCFFQLQRVDLGFSVLAKI---------------IKLGLQLTIVTFNTLINGLCKVGKFG 209
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
FD MV G PD TY I L K + F +M + QP + +T I
Sbjct: 210 QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTII 269
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L A++I++Y+ GI P + N L+ GL N R + EM++ I+
Sbjct: 270 DSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 329
Query: 239 IYDVTMQKLKKAFYNESRSMRDR 261
VT L F E R
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEAR 352
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F EM+ + P+ +++Y T + L + ++ EA + M
Sbjct: 411 GYCKAKRIGEAKQLFNEMIHQ-GLTPD-IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 468
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S LD K +L+ M L PN++MYN ++ +C + ++
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST--YLKPNMVMYNILIDAMCKSRNLKEA 526
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F ++ G P+ Y I L K + E F M ++ P + I
Sbjct: 527 RKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Query: 181 LLDADEPEFAIEIWNYILENGIL 203
L + A+++ + E G +
Sbjct: 587 FLQHKDESRAVQLIGEMREKGFV 609
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 83/207 (40%), Gaps = 2/207 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + T + L + + +A++ M P + ++ ++ L K+ ++ L+
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFR 251
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P+++ Y+ ++ LC + V+ F M G P+ TYN + + L
Sbjct: 252 KMGEAG--CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ E +EM+ P + + I + A + + E G+ P +
Sbjct: 310 FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ L+ G + + R+ + M+ +
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITK 396
>gi|116791998|gb|ABK26193.1| unknown [Picea sitchensis]
Length = 262
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
L L +G++ DEALK +MK +P K ++ + L KL + + M G
Sbjct: 2 LGGLFKGRKKDEALKLFGLMKINGPYPDSKSYTIVIRALSKLQKMEEASKFFAEMQEHGS 61
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L + +Y ++ N +D + +M G D TYN + + ++ K E
Sbjct: 62 PL--DAAVYTCMITGYGNTKKLDKAYVLLQEMKEKGIPHDCRTYNALIKVMMVLHKPDEA 119
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F +M + +QPT + + A PE IW+ + NG P S V + G
Sbjct: 120 TKLFEKMSQCGFQPTIHTYNMLMKLYFRARNPEMGFAIWDQMARNGCCPDVNSYTVFIGG 179
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L GR + + E M+++
Sbjct: 180 LIREGRSEEACAYIESMIDK 199
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++G L D + F M +G +PDS +Y ++ L K +K+ E FF EM +
Sbjct: 1 MLGGLFKGRKKDEALKLFGLMKINGPYPDSKSYTIVIRALSKLQKMEEASKFFAEM---Q 57
Query: 167 WQPTPLNCATAITML 181
+PL+ A M+
Sbjct: 58 EHGSPLDAAVYTCMI 72
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRJAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 270 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L+ GL GR D + EML+
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQAHHLIDEM 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + +
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 59/138 (42%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 141 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260
Query: 220 GRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 261 GRVDLAMEIYKQMLSQSL 278
>gi|222619024|gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
Length = 428
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 11/263 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA F EM+ V+ Y T + L R D+ALK M
Sbjct: 52 GLCRRGRLPEARDLFAEMIA--NGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGI 109
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K + V+L D MV +PN I Y++V+ LC +
Sbjct: 110 MPNVVTYSSLIDGLCKGGRAASAVELLDRMV--KERKLPNTITYSSVIDGLCKEGCLGQA 167
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA----- 175
D+M G PD+ + + L + E N+ EM +P L +
Sbjct: 168 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRI 227
Query: 176 --TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+T L E A +++ + GI + ++L+ L L +ML
Sbjct: 228 NDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDML 287
Query: 234 NRRILIYDVTMQKLKKAFYNESR 256
+ R + T + +A++++ +
Sbjct: 288 SERCIPERETWDTIVRAYWSKKK 310
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL-MPNLIMYNAVVGLLCN 113
M+ PT + ++LVK + S V + D V + N+ P+ YN V+ LC
Sbjct: 1 MRAAGFAPTTATY----NVLVKAHCSDAAVPI-DDAVRVFRNIPKPDACSYNTVIDGLCR 55
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ F +M+ +G P +TY + L + + F EM + P +
Sbjct: 56 RGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVT 115
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ I L A+E+ + +++ LP + + ++ GL G L A E+L
Sbjct: 116 YSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQ----AMEIL 171
Query: 234 NR 235
+R
Sbjct: 172 DR 173
>gi|302771776|ref|XP_002969306.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
gi|300162782|gb|EFJ29394.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
Length = 587
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K ++ EA + F E+ + +++Y + + + + + + G+
Sbjct: 384 GLLKLNDLSEAARLFSEI------DKPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGL 437
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ L L LW M+ G + P++ Y ++ LC +N +
Sbjct: 438 RPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVS--PSVATYTILIHALCRDNRLQAA 495
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M G PD++TYN + CL KN+ + E EM K TP I
Sbjct: 496 RQIIDKMKGQGVLPDAITYNTLLHCLCKNELLDEARLLLREM-KQHCSYTPATWNIVIDG 554
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+L+ +P A I++ ++ +G P
Sbjct: 555 ILEQRDPGVAQRIFSQLIRDGFFP 578
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + + + EM R + H LA+ + + L + + DEA L + C
Sbjct: 110 GCCRSGRLDTCVEIYQEMRSR-GFRVSH-LAFNSLVCGLCKAGRTDEAWDVLGKSRPSAC 167
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ S + L +D ++L M + PN++ Y +V+ LC D
Sbjct: 168 ADAVTL-STVIHALCS-SDCDRALELMRAMQAQ--RVPPNVVTYTSVIDGLCKAGRRDAA 223
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
QM G P+++TYN + L K K+ + M P+
Sbjct: 224 MVLLQQMQAAGCSPNTVTYNCLIHSLCKAGKLEDAFALLRGMPSKGCTPS 273
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+ +I + D AL+ +R M+ + P + +++ +D L K + L M
Sbjct: 174 STVIHALCSSDCDRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDAAMVLLQQMQAA 233
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN---- 149
G + PN + YN ++ LC +++ F M G P N + + K+
Sbjct: 234 GCS--PNTVTYNCLIHSLCKAGKLEDAFALLRGMPSKGCTPSINNKNTLVSGICKHAIME 291
Query: 150 ------------------KKVHEVEN-----FF----HEMIKNEWQPTPLNCATAITMLL 182
++ + VE F+ H N +P + I L
Sbjct: 292 RQRREFGKLGQALFSEAMQESYSVEEDTLALFYTCLEHMFGSNGDRPDKRTYSIVIHFLC 351
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
AD+ A +W +++ + N L GL L LS+ R E+ ++ Y +
Sbjct: 352 KADKVLEAARVWRAMVKRLGQVDAVTYNSFLYGLLKLNDLSEAARLFSEIDKPTLVSYSL 411
Query: 243 TMQKLKKA 250
+ KA
Sbjct: 412 LVHAYFKA 419
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 6/201 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + +V EA + R M +++ L L+KLND + +L+ +
Sbjct: 343 YSIVIHFLCKADKVLEAARVWRAMVKRLGQVDAVTYNSFLYGLLKLNDLSEAARLFSEID 402
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
P L+ Y+ +V D+ V + G PD YN++ L K+
Sbjct: 403 ------KPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAKQ 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + + EM+ N P+ I L + + A +I + + G+LP + N
Sbjct: 457 EAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPDAITYNT 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
LL L L + R EM
Sbjct: 517 LLHCLCKNELLDEARLLLREM 537
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 35/258 (13%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL------------------------ 64
+ Y + +L + ++++A LR M + C P++
Sbjct: 239 TVTYNCLIHSLCKAGKLEDAFALLRGMPSKGCTPSINNKNTLVSGICKHAIMERQRREFG 298
Query: 65 ----KFFSNALDILVKLNDSTHTV--QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
FS A+ + + T + + M G + P+ Y+ V+ LC + V
Sbjct: 299 KLGQALFSEAMQESYSVEEDTLALFYTCLEHMFGSNGD-RPDKRTYSIVIHFLCKADKVL 357
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
R + MV D++TYN L+K + E F E+ K PT ++ + +
Sbjct: 358 EAARVWRAMVKRLGQVDAVTYNSFLYGLLKLNDLSEAARLFSEIDK----PTLVSYSLLV 413
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A + E++ G+ P A N++L GL + + V EMLN +
Sbjct: 414 HAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVS 473
Query: 239 IYDVTMQKLKKAFYNESR 256
T L A ++R
Sbjct: 474 PSVATYTILIHALCRDNR 491
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 75/187 (40%), Gaps = 8/187 (4%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L K + ++W MV +G + + YN+ + L ND+
Sbjct: 338 PDKRTYSIVIHFLCKADKVLEAARVWRAMVKRLG---QVDAVTYNSFLYGLLKLNDLSEA 394
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F ++ P ++Y+++ K + +VE + +P +
Sbjct: 395 ARLFSEI----DKPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHG 450
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + +W +L NG+ P A+ +L+ L RL R+ ++M + +L
Sbjct: 451 LSGAKQEAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPD 510
Query: 241 DVTMQKL 247
+T L
Sbjct: 511 AITYNTL 517
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 15/226 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHV--LAYETFLITLIRGKQVDEALKFLRVMKGE 58
G K GN+VEA K + R + P V + Y T L + + EA+ M
Sbjct: 510 GLCKGGNLVEAKK----FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 565
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
N P +S+ L L + + V L+ +G G L PN +MY +V L
Sbjct: 566 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG-TLFPNHVMYTCLVDGLSKAGHPK 624
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F FF++M+ G PD++ +N I + + ++ + +FF M W N AT
Sbjct: 625 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM---RWWGVCPNLAT-Y 680
Query: 179 TMLLDADEPEFA----IEIWNYILENGILPLEASANVLLVGLRNLG 220
+LL + A + +++ ++ GI P + + + L++GL G
Sbjct: 681 NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 726
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 17/239 (7%)
Query: 4 KEGNVVEANKTF------GEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
+ GNV EA K + G + F N + +L R ++ EA KFL M
Sbjct: 408 EHGNVTEAMKVYAVMNCNGHGADHFTCN--------VLVSSLCRDGKLGEAEKFLCHMSR 459
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ + D + +D M+ G + P+ Y +++ LC ++
Sbjct: 460 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH--PSFFTYGSLLKGLCKGGNL 517
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+F +++ + DS+ YN + K+ +HE F +M++N P ++
Sbjct: 518 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 577
Query: 178 ITMLLDADEPEFAIEIWNYILENGIL-PLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+T L + A+ ++ + G L P L+ GL G F EEM+ +
Sbjct: 578 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 636
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 4/231 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + A +TF E+V + P V L ++++ K+ + R M +
Sbjct: 173 YLKEGMIDYAVETF-ELVGLVGFKPS-VYTCNMILASMVKDKRTELVWSLFREMSDKGIC 230
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F+ ++ L + L M GF +P ++ YN ++ C
Sbjct: 231 PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF--VPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D M+ G D TYN+ + L N + + +M K P + T I
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A +++N + + + P + N L+ G ++G + R + M
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
E++K + MK P++ F++ L IL+K + L+D M + + P+ +N
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT-YGVTPDSYTFNT 214
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK-- 164
++ C N+ VD FR F M + PD +TYN I + L + KV N M+K
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ P ++ T + E + A+ +++ +L G+ P + N L+ GL R +
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 334
Query: 225 VR 226
++
Sbjct: 335 IK 336
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 103/252 (40%), Gaps = 7/252 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G A+ F EM + P+ + T + + VDEA + + M+ +C P
Sbjct: 185 KRGRTGMAHDLFDEMRRTYGVTPDSY-TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D L + + M+ ++ PN++ Y +V C ++D
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE----WQPTPLNCATAIT 179
F M+ G P+++TYN + + L + + E+++ + N+ + P I
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIK 361
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
DA + A++++ +L + P AS +VL+ L E+ + +L+
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLL 421
Query: 240 YDVTMQKLKKAF 251
+ L A+
Sbjct: 422 GKDECKPLAAAY 433
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 23/271 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + + EA F +M+ R P V Y T + L + DE L + G +
Sbjct: 290 GYCMKQEIDEAVLVFHDMLSR-GLKPNAV-TYNTLIKGLSEAHRYDEIKDIL--IGGNDA 345
Query: 61 FPTLKFFSNALDILVKLN-DSTH---TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
F T + +IL+K + D+ H ++++ M+ + L P+ Y+ ++ LC N+
Sbjct: 346 FTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM--KLHPDSASYSVLIRTLCMRNE 403
Query: 117 VDNVFRFFDQM----VFHG---AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D F+++ V G P + YN +FE L N K + E F +++K Q
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
P + T IT + + A E+ +L +P + +L+ GL +G
Sbjct: 464 PP-SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522
Query: 230 EEMLNRRIL-----IYDVTMQKLKKAFYNES 255
+ ML L + V + K+ F NES
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKRKFANES 553
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 9/268 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + A EMV NP+ + Y + L + +V EA L VM
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLE-NINPD-IYTYTILVDALCKEGKVKEAENVLAVMVKACV 299
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S +D +N+ + +++ M +G + P++ Y+ ++ LC VD
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG--VTPDVHCYSIMINGLCKIKRVDEA 357
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+++ PD++TY + +CL K+ ++ V + F EM+ P + I
Sbjct: 358 LNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDA 417
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
L + AI ++N + + I P + +LL GL +GRL + F +++L +
Sbjct: 418 LCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLN 477
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFD 263
+ Y V + L K+ +E+ +++ R +
Sbjct: 478 VRTYTVMINGLCKEGLLDEALALQSRME 505
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 6/264 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA MV+ V+ Y T + +V+ A + M P
Sbjct: 280 KEGKVKEAENVLAVMVK--ACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K+ + L++ + N++P+ + Y +++ LC + + V+
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQK--NMVPDTVTYTSLIDCLCKSGRISYVWDL 395
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD+M+ G PD +TYN + + L KN + F++M +P + L
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+E + +L G + V++ GL G L + M + + VT
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515
Query: 244 MQKLKKAFYNESRSMRDRFDSLER 267
+ + +AF+++ + D+ + L R
Sbjct: 516 FEIMIRAFFDKDEN--DKAEKLVR 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y + + + + A++ LR ++ + P + +S +D L K L+
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTE 223
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MVG G + P+++ Y+ +V C ++ ++MV PD TY ++ + L K
Sbjct: 224 MVGKGIS--PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
KV E EN M+K + +T + +E A ++ + + G+ P
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLER 267
++++ GL + R+ + EE+ + ++ VT L R + D FD +
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401
Query: 268 RWK 270
R +
Sbjct: 402 RGQ 404
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 15/248 (6%)
Query: 11 ANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A+ + F +P H + LI+L+ K+ A+ + M+ P +F+
Sbjct: 39 ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEP--DYFT- 95
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIG----FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
L+I++ N H Q+ G+ PN I N ++ LC V RF D
Sbjct: 96 -LNIII--NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHD 152
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+++ G ++Y ++ + K + + + +P + + I L
Sbjct: 153 KVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDT 212
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYD 241
+ A +++ ++ GI P + ++L+ G +G+L+ EM +N I Y
Sbjct: 213 LVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT 272
Query: 242 VTMQKLKK 249
+ + L K
Sbjct: 273 ILVDALCK 280
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 106/270 (39%), Gaps = 38/270 (14%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV- 75
E +E P ++ Y + L R ++D+A L+ M+ E C P + ++ +D L
Sbjct: 251 EEMETLGLRP-NIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309
Query: 76 ------------KLNDSTHTVQL----------------------WDIMVGIGFNLMPNL 101
K+ S+H L W M G+ P++
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGY--APDV 367
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ Y +V LC + VD F D M G P+ TYN + L+ +++ E F+
Sbjct: 368 VTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNN 427
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M PT + I +PE A++ + + + GI+P A+ N L L +GR
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 222 LSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ + + ++ N + VT + K +
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +D F + K PT + ++ +D L+ N + ++L+ M G PN+
Sbjct: 767 KALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAG--CCPNIF 824
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
YN ++ + +D +F +++M+ G P+ +T+N+I L+K+ +++ + ++E+
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
I ++ PTP I LL A E A++I+ + + P A N+L+ G G +
Sbjct: 885 ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNV 944
Query: 223 SDVRRFAEEMLNRRI 237
+ + M+ I
Sbjct: 945 NIACDLFKRMIKEGI 959
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + +A K EM+ E ++ + + TL + +VDEA + +K
Sbjct: 517 YSKAGQIDKATKLLTEMLS--EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLA 574
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ + L K + L+ M G PN + +NA++ LC N+ VD
Sbjct: 575 PTVVTYNILITGLGKEGKLLKALDLFGSMKESG--CPPNTVTFNALLDCLCKNDAVDLAL 632
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ F +M PD LTYN I LIK + F+H+M K P + T + +
Sbjct: 633 KMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGV 691
Query: 182 LDADEPEFAIEI-WNYILENGI 202
+ E AI+I ++ ++G+
Sbjct: 692 VKDGRVEDAIKIVMEFVHQSGL 713
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 7/234 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA F + + +P+ V Y + + Q+D+A K L M E C P +
Sbjct: 486 GRIREAKDIFND-IHNCGLSPDSV-TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDII 543
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D L K Q++ + + L P ++ YN ++ L + F
Sbjct: 544 VVNSLIDTLYKAGRVDEAWQMFGRLKDL--KLAPTVVTYNILITGLGKEGKLLKALDLFG 601
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G P+++T+N + +CL KN V F M P L T I L+
Sbjct: 602 SMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Query: 186 EPEFAIEIWNY-ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+A W Y ++ + P + LL G+ GR+ D + E +++ L
Sbjct: 662 RAGYA--FWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGL 713
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y T + L+ +++DEAL+ M+ PT + +D KL D + ++ M
Sbjct: 404 TYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G +MP++ NA + L + F+ + G PDS+TYNM+ +C K
Sbjct: 464 KKRG--IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAG 521
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ + EM+ +P + + I L A + A +++ + + + P + N
Sbjct: 522 QIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYN 581
Query: 211 VLLVGLRNLGRL 222
+L+ GL G+L
Sbjct: 582 ILITGLGKEGKL 593
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 6/235 (2%)
Query: 5 EGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+G + +A G+M + F N +Y + L++ EALK + M E P+
Sbjct: 170 KGGIRQAPFALGKMRQAGFVLN---AYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPS 226
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+K +S + L + D+ + L + M +G L PN+ Y + +L +D+ +
Sbjct: 227 MKTYSALMVALGRRRDTGTIMDLLEEMETLG--LRPNIYTYTICIRVLGRAGRIDDAYGI 284
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M G PD +TY ++ + L K+ + + + +M + +P + T ++ +
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGN 344
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ E W+ + +G P + +L+ L G++ + M R I+
Sbjct: 345 YGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ + + L++ +++AL + + PT + + L+K S ++++
Sbjct: 857 NIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIF 916
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M + PN +YN ++ +V+ F +M+ G PD +Y ++ ECL
Sbjct: 917 EEMPD--YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+V + ++F E+ P ++ I L + E A+ +++ + GI P
Sbjct: 975 MTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELY 1034
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L++ N G + + EE+
Sbjct: 1035 TYNALILHFGNAGMVDQAGKMFEEL 1059
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 8/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G V +A K E V + + + E LI +++EA+ F + +
Sbjct: 690 GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEA-EIEEAISFAEGLVCNSI 748
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMV-GIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ +L K + +L+D +G + P YN ++ L N +
Sbjct: 749 CQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE--SYNCLMDGLLGCNITEA 806
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F +M G P+ TYN++ + K+K++ E+ ++EM+ +P + I+
Sbjct: 807 ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR--- 236
L+ ++ A++++ I+ P + L+ GL GR + + EEM + +
Sbjct: 867 ALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKP 926
Query: 237 -ILIYDVTMQKLKKA 250
IY++ + KA
Sbjct: 927 NCAIYNILINGFGKA 941
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 5/232 (2%)
Query: 7 NVVEAN-KTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
N+ EA K F EM + ++ Y L + K++DE + M C P +
Sbjct: 802 NITEAALKLFVEM--KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNII 859
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + LVK N + L+ ++ F+ P Y ++G L + + F+
Sbjct: 860 THNIIISALVKSNSINKALDLYYEIISGDFS--PTPCTYGPLIGGLLKAGRSEEAMKIFE 917
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M + P+ YN++ K V+ + F MIK +P + + L
Sbjct: 918 EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+ + + G+ P S N+++ GL RL + EM NR I
Sbjct: 978 RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + +A + + +M R + ++ Y T + ++ +F M+ + P +
Sbjct: 311 GKLDKAKELYTKM--RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVV 368
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ ++ L K + D+M G ++PNL YN ++ L N +D F+
Sbjct: 369 TYTILVEALCKSGKVDQAFDMLDVMRVRG--IVPNLHTYNTLISGLLNLRRLDEALELFN 426
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G P + +Y + + K + + F +M K P+ C ++ L +
Sbjct: 427 NMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMG 486
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
A +I+N I G+ P + N+++ G++ + EML+ + +
Sbjct: 487 RIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVN 546
Query: 246 KLKKAFYNESR 256
L Y R
Sbjct: 547 SLIDTLYKAGR 557
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GNV A F M++ E + +Y + L +VD+A+ + +K
Sbjct: 937 GFGKAGNVNIACDLFKRMIK--EGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ L K + L+ M G + P L YNA++ N VD
Sbjct: 995 DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS--PELYTYNALILHFGNAGMVDQA 1052
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ F+++ F G P+ TYN + K+ + F +M+ P
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSP 1101
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 40/288 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +++A FG M E P + + + L L + VD ALK M NC
Sbjct: 586 GLGKEGKLLKALDLFGSMKE--SGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNC 643
Query: 61 FPTLKFFSNALDILVKLNDSTHT---------------VQLWDIMVGI------------ 93
P + ++ + L+K + + V L+ ++ G+
Sbjct: 644 SPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKI 703
Query: 94 --GFNLMPNLIMYNAVVGLLCN----NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
F L N V G L +++ F + +V + D + L
Sbjct: 704 VMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLC 763
Query: 148 KNKKVHEVENFFHEMIKN-EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K KK + + F + K+ PTP + + LL + E A++++ + G P
Sbjct: 764 KQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNI 823
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKA 250
+ N+LL R+ ++ EML R I+ +++ + L K+
Sbjct: 824 FTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKS 871
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 8/244 (3%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
G+M+ + P ++ + + L RG +V +AL M G P + ++ +D L
Sbjct: 139 LGKMI-KLGHEPS-IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 75 VKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
K + + L + M GIG P+++ YN+++ LC++ + R M
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIG----PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
+PD T+N + + +K +V E E F+ EMI+ P + + I L + A E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
++ +++ G P + ++L+ G ++ + EM R ++ VT L + +
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 253 NESR 256
+
Sbjct: 373 RAGK 376
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA + + EM+ R +P+ ++ Y + L ++DEA + M + CFP
Sbjct: 268 KEGRVSEAEEFYEEMIRR-SLDPD-IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ K H ++L+ M G ++ N + Y ++ C ++
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRG--VVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MVF G P+ +TYN++ L N K+ + +M KN + I +
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A E A +I+ + G++P + +++GL G +RR A+ + +
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG----LRREADALFRK 491
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 42/255 (16%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM- 90
Y L IR ++D++L M P++ FS L + K+ + LW+ M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 91 -VGIGFNLM-------------------------------PNLIMYNAVVGLLCNNNDVD 118
+GI NL P+++ + +++ C + V
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ FDQMV G P+ + YN I + L K+K+V + + M K+ P + + I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR--- 235
+ L + A + + + + I P + N L+ GR+S+ F EEM+ R
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 236 ------RILIYDVTM 244
+LIY + M
Sbjct: 289 PDIVTYSLLIYGLCM 303
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 8/237 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V +A F +MV + P +V+ Y T + L + KQVD AL L M+ +
Sbjct: 160 GFCRGDRVYDALYMFDQMVG-MGYKP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L + ++ M + P++ +NA++ V
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTK--REIYPDVFTFNALIDACVKEGRVSEA 275
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+++M+ PD +TY+++ L ++ E E F M+ P + + I
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + E ++++ + + G++ + +L+ G G+L+ AEE+ R +
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN----VAEEIFRRMV 388
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA F EM ++ ++ +Y + + ++ + + AL+ M PT
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQY--SYNSLISGFLKADRFNRALELFNHMNIHG--PTPN 415
Query: 66 FFSNALDI--LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ L I K +S ++ +++M G ++P+++ NAV+ L + R
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKG--IVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G PD++TY M+ +C K E F EMI+N P L + I ML
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A A +I+ + E + P + + N LL GL G++ +V + E M
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K +DEA+ + E PT + LD L+K + L+D
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ D + V F+ MV G PD +Y ++ + L +
Sbjct: 897 MLECGCE--PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ ++F ++ +P + I L + E A+ ++N + + GI P +
Sbjct: 955 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAK 1040
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 9/276 (3%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K N EA K F EM+E P+ VLA + + L + + +EA K +K N P
Sbjct: 497 SKASNADEAMKIFAEMIEN-RCAPD-VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T ++ L L + +QL + M F PN+I YN V+ LC N +V+
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP--PNIITYNTVLDCLCKNGEVNYALD 612
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M +G PD +YN + L+K ++ E F +M K C + +
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVR 672
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
E + YIL+ +S + L+ G+ FAE + + +L+ D+
Sbjct: 673 SGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDL 732
Query: 243 TMQKLKKAFYNESRSMR-----DRFDSLERRWKTSQ 273
+ + + F ++ +F++L KT
Sbjct: 733 FLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGS 768
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 45/256 (17%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL---------- 64
GEM R P +V +Y + L + +++EA + LR M+ E C P +
Sbjct: 229 LGEMEAR-GVRP-NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286
Query: 65 ---KFFSNALDILVKL----------------------NDSTHTVQLWDIMVGIGFNLMP 99
++A D+ K+ DS ++W+ + G+N
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYN--D 344
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N++ Y A V LC VD FD+M G P +YN + +K + + F
Sbjct: 345 NVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELF 404
Query: 160 HEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ M N PTP N T + + + E A++ + + GI+P + N +L GL
Sbjct: 405 NHM--NIHGPTP-NGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461
Query: 217 RNLGRLSDVRRFAEEM 232
GRL +R E+
Sbjct: 462 AKTGRLGMAKRVFHEL 477
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ +++A M C P ++ L+
Sbjct: 863 MSEGFSPTP---CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIA 919
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
D+ +L++ MV G N P++ Y V+ LC + +++ +F Q+ G PD +
Sbjct: 920 GDTEKVCELFESMVEQGMN--PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ L K+ ++ E + +++M K P + I L A + A +++ +
Sbjct: 978 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1038 LAKGWKPNVFTYNALIRG 1055
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 90/225 (40%), Gaps = 2/225 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EA+ + M + PT++ +S + K D+ V L M
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G PN+ Y + +L ++ +R +M G PD +T ++ + L +
Sbjct: 234 ARGVR--PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M ++ +P + T + D+ + EIWN + +G S
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L +GR+ + +EM + I+ + L F R
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 14/209 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIR-GKQVDEALKFLRVMKGEN 59
G K+GN+ +A F EM E E A L+ R ++ + M +
Sbjct: 880 GLLKDGNIEDAEALFDEM---LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 60 CFPTLKFFSNALDILV---KLNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P +K ++ +D L +LND ++ QL D+ L P+LI YN ++ L +
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM------GLEPDLITYNLLIHGLGKSG 990
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
++ ++ M G P+ TYN + L K K E + E++ W+P
Sbjct: 991 RLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYN 1050
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILP 204
I + PE A + ++ G P
Sbjct: 1051 ALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y+ ++ + + ++++ + ++M G +TYN I L+K+K + E N
Sbjct: 799 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 858
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++++ + PTP + LL E A +++ +LE G P A N+LL G R
Sbjct: 859 YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 918
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
G V E M +N I Y V + L
Sbjct: 919 AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ L + + +D F +M G PD TY++I + + K+ ++ ++ EM
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
++ T + T I+ L+ + + AI ++ ++ G P + LL GL G +
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 224 DVRRFAEEML 233
D +EML
Sbjct: 889 DAEALFDEML 898
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G ++A K + E+++ P+ V+A L L + ++ A + +K P
Sbjct: 428 KSGESLKALKRY-ELMKSKGIVPD-VVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K +++ ++++ M I P+++ N+++ +L + ++
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEM--IENRCAPDVLAMNSLIDMLYKAGRGNEAWKI 543
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ P TYN + L + KV EV M N + P + T + L
Sbjct: 544 FYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCK 603
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
E +A+++ + NG +P +S N ++ GL GRL +
Sbjct: 604 NGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 91/230 (39%), Gaps = 2/230 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V++Y + L + +VDEAL MK + P +++ + +K + ++L
Sbjct: 344 DNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALEL 403
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ M G PN + + + + + ++ M G PD + N + L
Sbjct: 404 FNHMNIHGPT--PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ + FHE+ P + I A + A++I+ ++EN P
Sbjct: 462 AKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDV 521
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ L GR ++ + E+ + D T L E +
Sbjct: 522 LAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGK 571
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + +++EAL M+ + P L +++ + L K + ++++
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ PN+ YNA++ + +N F + +M+ G P+S TY
Sbjct: 1036 ELLAKGWK--PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
VE +KT+G +V F + + ++++L+ L + + + +S
Sbjct: 91 VEDSKTYGTLVNGF-----------------CKNRYINKSLQVLEIAEQKGGVLDAFAYS 133
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
++ L K V + + M+ G PN +YNA++ L + +D+ R F +M
Sbjct: 134 AMINALCKEAKLEKAVCVLNGMIKSGCK--PNTCVYNALIKGLVGASKLDDAIRVFHEMG 191
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+ PD +TYN++ L K + E + EM++ P+ + + + L D+ E
Sbjct: 192 TTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+++WN + + G P N+L+ GL ++G+ +M VT L
Sbjct: 252 MALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLM 311
Query: 249 KAFYNES 255
+ FY +
Sbjct: 312 QGFYKDG 318
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ Y + L+ ++D+A++ M + P + ++ ++ L K + L
Sbjct: 163 NTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLV 222
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ G + P++I Y+ ++ LC + V+ + ++Q+ G PD +N++ L
Sbjct: 223 KEMLEKGLD--PSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLC 280
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILP 204
K + + +M N W P N T T++ A+ IW IL N + P
Sbjct: 281 SVGKTQLALSLYLDM--NRWNCAP-NLVTQNTLMQGFYKDGNIRNALVIWARILRNELQP 337
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
S N+ L GL + R+SD F + ++++
Sbjct: 338 DIISYNITLKGLCSCNRISDAILFLHDAVSKK 369
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ GN+ A + + ++VER + +P+ V+ Y L R ++ E+CF
Sbjct: 2 ESGNIDGAERVYEDIVER-KVSPDAVV-YNAMLNGFYRAGRI------------EDCF-- 45
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+LW++M G ++ +N ++ +L +N V+
Sbjct: 46 ---------------------ELWEMM---GREGRRSVASFNTMIRVLFDNGKVEEAMSI 81
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M G DS TY + KN+ +++ + + I L
Sbjct: 82 RELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQKGGVLDAFAYSAMINALCK 141
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A+ + N ++++G P N L+ GL +L D R EM
Sbjct: 142 EAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEM 190
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 12/239 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G+ +A F M++R P+ V +Y T + L +GK++ EA + + MKG C
Sbjct: 138 GFCQSGDSHKAMDLFC-MMKRNCLIPDCV-SYNTVINGLCKGKRLVEAKELFKEMKGGEC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P FS +D K D L + M +G L ++ +Y+A++ C+ D++
Sbjct: 196 KPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG--LEGDVFVYSALISGFCSKGDIERG 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M+ P+ +TY+ + L K +K E M + +P A T+
Sbjct: 254 KELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD----VVAYTV 309
Query: 181 LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D AI++ + +++ G P + N ++ GL GR+ D E M +
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +A K MV+R E P +V Y + L + +VD+AL L M +
Sbjct: 313 GLSKNGRASDAIKVLDLMVKRGE-EPNNV-TYNAIINGLCKEGRVDDALGILETMAKKGK 370
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L + V L ++++ F++ P++ +N V+ LC + +
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHA 430
Query: 121 FRFFDQMVFHGAFPDSL-TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R + MV G FP ++ TYN++ + + K+ + + + + + P I
Sbjct: 431 KRVYYTMVERG-FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L A ++N +G P + N L+ L + R +EM N
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRN 544
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 16/254 (6%)
Query: 26 PEHVLAYE---TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
P + +Y T + L + K D + M + FP S ++ V +
Sbjct: 53 PNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSF 112
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ +++ GF+L N+ +N ++ C + D F M + PD ++YN +
Sbjct: 113 AFGVLGLIMKRGFHL--NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTV 170
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L K K++ E + F EM E +P + + I + E E + + E
Sbjct: 171 INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE---EGFGLLEEMEK 227
Query: 203 LPLEASA---NVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL-KKAFYNE 254
+ LE + L+ G + G + + EML + ++ Y M L KK + E
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287
Query: 255 SRSMRDRFDSLERR 268
+ M D + R
Sbjct: 288 AAQMLDTMTGCKVR 301
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 5/218 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT-LKFFSNALDILVK 76
M + F P+ V A+ + L + +++ A + M E FP+ + ++ +D +
Sbjct: 401 MSKEFHIKPD-VFAFNLVIQELCKQRRLRHAKRVYYTMV-ERGFPSNIVTYNILIDGYLS 458
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
T ++LW V G + PN Y ++ LC + F++ G P
Sbjct: 459 AGKLTKALELWKDAVDSGIS--PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTV 516
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
YN + L + V + N F EM P ++ I L A + E A E+
Sbjct: 517 SEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLE 576
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+L ++P + ++L+ LG+L + E M++
Sbjct: 577 MLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVS 614
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 102/250 (40%), Gaps = 32/250 (12%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ + A + + MVER P +++ Y + + ++ +AL+
Sbjct: 423 KQRRLRHAKRVYYTMVER--GFPSNIVTYNILIDGYLSAGKLTKALEL------------ 468
Query: 64 LKFFSNALDILVKLNDSTHTV--------QLWDIMVGIGFN------LMPNLIMYNAVVG 109
+ +A+D + N +T+TV Q+ I G+ FN P + YN ++
Sbjct: 469 ---WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGL-FNKKRASGTRPTVSEYNTLMA 524
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + V+ F +M PD +++N+I + +K V + EM+ P
Sbjct: 525 SLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVP 584
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ + I L + + A ++ ++ G +P + LL G G+ V
Sbjct: 585 DNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSML 644
Query: 230 EEMLNRRILI 239
++M ++ +++
Sbjct: 645 QQMADKDVVL 654
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y+ + L + +VD A++ L VM + C P + ++ L L K + + +++ +
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G + PN YN++ L + +M+ G PD +TYN + CL ++
Sbjct: 398 GEVGCS--PNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455
Query: 151 KVHEVENFF--HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V E EM +E +P+ ++ + L AIE+ +++ G P E +
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
L+ G+ G L+D R A ++N I + + ++L K F
Sbjct: 516 YTFLIEGIGFGGCLNDARDLATTLVNMDA-ISEHSFERLYKTF 557
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
++P+ ++ Y + +L +D AL+F + ENC PT+ ++ ++ +
Sbjct: 157 FSPD-IVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++L D M+ I NL P++ YN+++ +C VD F+ + G PD +TYN++
Sbjct: 216 MKLLDEMLEI--NLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILL 273
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L+ K +M+ + + + I+ + + E + + + + G+
Sbjct: 274 RGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLK 333
Query: 204 PLEASANVLLVGLRNLGRL 222
P + L+ L GR+
Sbjct: 334 PDGYCYDPLIAALCKEGRV 352
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
+E+L FLR + + P + + + L +Q+ I+ G P+LI YN
Sbjct: 74 NESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH---PDLIAYN 130
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
A++ C N +D+ ++ D+M G PD +TYN++ L + F ++++K
Sbjct: 131 AIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE 190
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+PT + I L + A+++ + +LE + P + N ++ G+
Sbjct: 191 NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGM 241
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V A + + + + P+ V+ Y L L+ + + + + M C
Sbjct: 240 GMCREGYVDRAFQIISSISSK-GYAPD-VITYNILLRGLLNQGKWEAGYELMSDMVARGC 297
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S + + + V L M G L P+ Y+ ++ LC VD
Sbjct: 298 EANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG--LKPDGYCYDPLIAALCKEGRVDLA 355
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M+ G PD + YN I CL K K+ E + F ++ + P + + +
Sbjct: 356 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSA 415
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A+ + +L+ G+ P + N L+ L
Sbjct: 416 LWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCL 451
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
Query: 29 VLAYETFLI--TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
V+ Y T LI TL++G +DEA+K L M N P + +++ + + + Q+
Sbjct: 196 VVTY-TILIEATLLQGG-IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ G+ P++I YN ++ L N + + MV G + +TY+++ +
Sbjct: 254 ISSISSKGY--APDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ KV E +M K +P I L + AIE+ + ++ +G +P
Sbjct: 312 CRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI 371
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N +L L R + E++
Sbjct: 372 VNYNTILACLCKQKRADEALSIFEKL 397
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + R + L L M+ + PTL + + ++ L K D L+
Sbjct: 1181 HVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLF 1240
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M GF+ PN+ +YN+V+ LC QM G PD +T+N + L
Sbjct: 1241 LEMRKRGFS--PNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1298
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + E+F E I+ E P L+ I E A ++ ++ G P
Sbjct: 1299 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1358
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKK 249
+ L+ GL G++S+ E+M R++ IY+V + L K
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV E FL IR + L + ++ G F A D+LV++ HT
Sbjct: 1302 HVRKAEHFLREAIRRELNPNQLSYTPLIHG---FCMRGELMVASDLLVEMMGRGHT---- 1354
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P+++ + A++ L V ++M FPD YN++ L
Sbjct: 1355 -----------PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1403
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + +N EM++ QP AT I + ++ A +I+ ++ GI P
Sbjct: 1404 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIV 1463
Query: 208 SANVLLVGLRNLGRLSDV 225
S N ++ G G +S+
Sbjct: 1464 SCNAMIKGYCQFGMMSEA 1481
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 57/144 (39%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +P+++ YN ++ C D+ +M G P +TY + L K +
Sbjct: 1175 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLE 1234
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + F EM K + P + I L A+ I + +G P + N L+
Sbjct: 1235 KIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLI 1294
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
GL + G + F E + R +
Sbjct: 1295 TGLCHEGHVRKAEHFLREAIRREL 1318
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ GEM E + P ++ Y + + L + +++ M+
Sbjct: 1191 GYCRRGDMGRGLLLLGEM-ETKGFLPT-LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +++ +D L K +T + + M G + P++I +N ++ LC+ V
Sbjct: 1249 SPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCD--PDIITFNTLITGLCHEGHVRKA 1306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + + P+ L+Y + ++ + EM+ P + I
Sbjct: 1307 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ A + A+ + + E + P NVL+ GL L + EEML + +
Sbjct: 1367 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + N+ +A K F E +E P+ +++ + + + EA+ + M+ C
Sbjct: 1436 GFIRSENLGDARKIF-EFMEHKGICPD-IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ + K + ++ L D+ I PN++ Y++++ C D D
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDM---IKRKCKPNVVTYSSLINGYCKTGDTDF 1550
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M P+ +TY ++ L K KV +F M+ N P
Sbjct: 1551 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 1600
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 4/242 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA +M ER + P+ V Y + L + + + A L M +N P
Sbjct: 1371 GKVSEALIVREKMTER-QVFPD-VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF 1428
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D ++ + ++++ M G + P+++ NA++ C +
Sbjct: 1429 VYATLIDGFIRSENLGDARKIFEFMEHKG--ICPDIVSCNAMIKGYCQFGMMSEAILCMS 1486
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G PD TY + K ++ + +MIK + +P + ++ I
Sbjct: 1487 NMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTG 1546
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ +FA ++ + + P + +L+ L ++ + E ML DVT+
Sbjct: 1547 DTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLH 1606
Query: 246 KL 247
L
Sbjct: 1607 YL 1608
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 6/268 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ AN M + P +V+ Y T L L ++ +EA L M E+C
Sbjct: 267 GICKDGHHEVANDILSRM-PSYGLKP-NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 324
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G +P++I Y V+ C VD
Sbjct: 325 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG--CIPDVITYTTVINGFCKEGLVDEA 382
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + ++ + + MI+ P P+ T I
Sbjct: 383 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 442
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 443 MCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502
Query: 241 DVTMQKLKKAFYNESRSMR--DRFDSLE 266
+ + A E R+ + FDS++
Sbjct: 503 TIIYSSMASALSREGRTDKIIQMFDSIQ 530
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 42/265 (15%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N ++E E EH V+ Y T + + VDEA+ L+ M C P
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + +L M+ G +PN + +N ++ +C + Q
Sbjct: 401 YTIVLKGLCRAERWVDAQELISHMIQQG--CLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL---NCATAI----- 178
M+ +G PD ++Y+ + + L K K E + MI P + + A+A+
Sbjct: 459 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518
Query: 179 --------------TMLLDAD-------------EPEFAIEIWNYILENGILPLEASANV 211
T+ DA E + AI+ + Y++ NG +P E++ +
Sbjct: 519 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 578
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRR 236
L+ GL + G + + + E+ +RR
Sbjct: 579 LIRGLASEGLVREAQDLLSELCSRR 603
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 81/228 (35%), Gaps = 12/228 (5%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y + +L + +AL L M C T L+ + V+
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ G L + N VV +C VD ++ G PD ++YN + +
Sbjct: 165 ALQVLHAKGCTL--DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 146 LIKNKKVHEVENFFHEMIK----------NEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
L K+ +VE EM++ + P AT I + E A +I +
Sbjct: 223 LCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 282
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ G+ P N +L GL + R + EM + DVT
Sbjct: 283 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 330
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALD--ILVKLNDSTHTVQLWDIMVGIGFNLMP--- 99
VDE ++ LR + C P + ++ L + K D + + + V + MP
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG 253
Query: 100 ---NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+L MY ++ +C + + +M +G P+ + YN + + L ++ E E
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLD----ADEPEFAIEIWNYILENGILP 204
+ EM + + PL+ T +L+D + IE+ +LE+G +P
Sbjct: 314 DLLAEMFQEDC---PLDDVT-FNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
V E++K + MK T+K ++ ++++ + ++ MV G P Y
Sbjct: 200 VQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVE--PTRHTY 257
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ + ++ RFFD M G PD++TYN I + KK+ E E F EM
Sbjct: 258 NLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKG 317
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N +P+ + T I L D + + I+ + GI P + + LL GL ++G++ +
Sbjct: 318 NNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVE 377
Query: 225 VRRFAEEMLNRRILIYD 241
+ + M+ + I D
Sbjct: 378 AKNILKNMMAKHIAPKD 394
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 2 WEKEGNVVEANKTFGEM----VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
+ K G V E+ K F +M VER + +Y T ++R + A ++ M
Sbjct: 194 YGKAGIVQESVKIFQKMKDLGVERT------IKSYNTLFKVILRRGRYMMAKRYFNKMVS 247
Query: 58 ENCFPTLKFFSNAL-DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E PT ++ L + L T ++ +D M G + P+ + YN ++ C
Sbjct: 248 EGVEPTRHTYNLMLWGFFLSLRLET-ALRFFDDMKTRGIS--PDAVTYNTIINGYCRFKK 304
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D + F +M + + P +TY + + + +V + F EM +P +T
Sbjct: 305 MDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYST 364
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ L D + A I ++ I P + S
Sbjct: 365 LLPGLCDVGKMVEAKNILKNMMAKHIAPKDNS 396
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + EA M++ HV Y T + + + D+A++ R M NC
Sbjct: 138 GLCKEAKLDEAVSVLNGMIKNGGTPNAHV--YNTLINGFVGVSKFDDAIRVFREMGSTNC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L M+ G+ P +I Y+ ++ LC + V+
Sbjct: 196 SPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWK--PCVITYSLLMKGLCQGHKVEMA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ +G PD N++ L K + +M N W P N T T+
Sbjct: 254 LQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM--NRWNCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW IL NG+ P S N+ L GL + R+S F ++ L ++
Sbjct: 311 MEGFYKDGDIRN-ALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKK 369
Query: 237 I 237
I
Sbjct: 370 I 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE + VE + T+G +V+ F + ++++L+ L + + +
Sbjct: 82 WELMTQSGFVEDSTTYGILVDGF-----------------CKNGYINKSLRVLGIAEEKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K V + + M+ G PN +YN ++ + D+
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGT--PNAHVYNTLINGFVGVSKFDD 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L K ++ E + EM++ W+P + + +
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
L + E A+++WN ++ NG+ P N+L+ GL ++G+
Sbjct: 243 GLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L +G++ EA ++ M + P + +S + L + + +QLW+
Sbjct: 199 VVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWN 258
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ G L P++ M N ++ LC+ + M P+ +T+N + E K
Sbjct: 259 QVISNG--LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYK 316
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ + + +++N QP ++ + L FAI L I P
Sbjct: 317 DGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAP 372
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 8/230 (3%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D A + + M P ++ L+ + ++LW++M G N++ +
Sbjct: 6 IDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELM---GREDSQNVVSF 62
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ L N DVD ++ M G DS TY ++ + KN +++ +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEE 122
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ I L + + A+ + N +++NG P N L+ G + + D
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDD 182
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD----SLERRWK 270
R EM + VT L R + +D LE+ WK
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGER-FAEAYDLVKEMLEKGWK 231
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
EA EM+E+ W P V+ Y + L +G +V+ AL+ + P ++ +
Sbjct: 216 AEAYDLVKEMLEK-GWKP-CVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLN 273
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ L + + + L+ M +N PNL+ +N ++ + D+ N + +++
Sbjct: 274 ILIHGLCSVGKTQLALMLYFDMNR--WNCAPNLVTHNTLMEGFYKDGDIRNALGIWARIL 331
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+G PD ++YN+ + L ++ F + + + P+
Sbjct: 332 RNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + ++M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA F EM ++ ++ +Y + + ++ + + AL+ M PT
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQY--SYNSLISGFLKADRFNRALELFNHMNIHG--PTPN 415
Query: 66 FFSNALDI--LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ L I K +S ++ +++M G ++P+++ NAV+ L + R
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKG--IVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G PD++TY M+ +C K E F EMI+N P L + I ML
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A A +I+ + E + P + + N LL GL G++ +V + E M
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K +DEA+ + E PT + LD L+K + L+D
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ D + V F+ MV G PD +Y ++ + L +
Sbjct: 897 MLECGCE--PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ ++F ++ +P + I L + E A+ ++N + + GI P +
Sbjct: 955 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAK 1040
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 45/256 (17%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL---------- 64
GEM R P +V +Y + L + +++EA + LR M+ E C P +
Sbjct: 229 LGEMEAR-GVRP-NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286
Query: 65 ---KFFSNALDILVKL----------------------NDSTHTVQLWDIMVGIGFNLMP 99
++A D+ K+ DS ++W+ + G+N
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYN--D 344
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N++ Y A V LC VD FD+M G P +YN + +K + + F
Sbjct: 345 NVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELF 404
Query: 160 HEMIKNEWQPTPLNCATAITML---LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ M N PTP N T + + + E A++ + + GI+P + N +L GL
Sbjct: 405 NHM--NIHGPTP-NGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461
Query: 217 RNLGRLSDVRRFAEEM 232
GRL +R E+
Sbjct: 462 AKTGRLGMAKRVFHEL 477
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 4/240 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K N EA K F EM+E P+ VLA + + L + + +EA K +K N P
Sbjct: 497 SKASNADEAMKIFAEMIEN-RCAPD-VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T ++ L L + +QL + M F PN+I YN V+ LC N +V+
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP--PNIITYNTVLDCLCKNGEVNYALD 612
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M +G PD +YN + L+K ++ E F +M K C + +
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVR 672
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
E + YIL+ +S + L+ G+ FAE + + +L+ D+
Sbjct: 673 SGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDL 732
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ +++A M C P ++ L+
Sbjct: 863 MSEGFSPTP---CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIA 919
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
D+ +L++ MV G N P++ Y V+ LC + +++ +F Q+ G PD +
Sbjct: 920 GDTEKVCELFESMVEQGMN--PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ L K+ ++ E + +++M K P + I L A + A +++ +
Sbjct: 978 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 1038 LAKGWKPNVFTYNALIRG 1055
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 2/225 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L++ EA+ + M + PT++ +S + K D+ V L M
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G + PN+ Y + +L ++ +R +M G PD +T ++ + L +
Sbjct: 234 ARG--VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + ++ F +M ++ +P + T + D+ + EIWN + +G S
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L +GR+ + +EM + I+ + L F R
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 14/209 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIR-GKQVDEALKFLRVMKGEN 59
G K+GN+ +A F EM E E A L+ R ++ + M +
Sbjct: 880 GLLKDGNIEDAEALFDEM---LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 60 CFPTLKFFSNALDILV---KLNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P +K ++ +D L +LND ++ QL D+ L P+LI YN ++ L +
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM------GLEPDLITYNLLIHGLGKSG 990
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
++ ++ M G P+ TYN + L K K E + E++ W+P
Sbjct: 991 RLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYN 1050
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILP 204
I + PE A + ++ G P
Sbjct: 1051 ALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y+ ++ + + ++++ + ++M G +TYN I L+K+K + E N
Sbjct: 799 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 858
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++++ + PTP + LL E A +++ +LE G P A N+LL G R
Sbjct: 859 YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 918
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
G V E M +N I Y V + L
Sbjct: 919 AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ L + + +D F +M G PD TY++I + + K+ ++ ++ EM
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
++ T + T I+ L+ + + AI ++ ++ G P + LL GL G +
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 224 DVRRFAEEML 233
D +EML
Sbjct: 889 DAEALFDEML 898
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 91/230 (39%), Gaps = 2/230 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V++Y + L + +VDEAL MK + P +++ + +K + ++L
Sbjct: 344 DNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALEL 403
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
++ M G PN + + + + + ++ M G PD + N + L
Sbjct: 404 FNHMNIHGPT--PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ + FHE+ P + I A + A++I+ ++EN P
Sbjct: 462 AKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDV 521
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ L GR ++ + E+ + D T L E +
Sbjct: 522 LAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGK 571
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + +++EAL M+ + P L +++ + L K + ++++
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ PN+ YNA++ + +N F + +M+ G P+S TY
Sbjct: 1036 ELLAKGWK--PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDGANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQAHDLIDEM 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDGAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 60/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 260 NGRVDLAMEIYKQMLSQSLL 279
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA + F +M E + AY T ++ + ++A K L ++ C P+
Sbjct: 30 KAGRLGEAEELFAQM--EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 87
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ L L K + L+++M + PN YN ++ +LC V+ +R
Sbjct: 88 VVSFNSILTCLGKKRKVDEALSLFEVMKK---DAEPNSSTYNIIIDMLCLGGRVEEAYRI 144
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M FP+ LT N++ + L K +K+ E F + P + + I L
Sbjct: 145 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 204
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEMLNR 235
+ + A ++ +L+ G A+ V +RN GR D + +E++ R
Sbjct: 205 KGQVDEAYRLFEKMLDAG---HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 28/284 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A K + ER V+++ + L L + ++VDEAL VMK ++
Sbjct: 62 GYGSAGRFEDAYKLLERLRER--GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDA 118
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D+L ++ D M +L PNL+ N +V LC ++
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEA 176
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ F+ G PD +TY + + L K +V E F +M+ P+ + I
Sbjct: 177 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 236
Query: 181 LLDADEPEFAIEIWNYILENGILP------------LEAS----ANVLLVGLRNLGRLSD 224
E +I+ ++ G P +A ++ +R+ G L D
Sbjct: 237 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 296
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
VR ++ ILI+ +T + N +M+ + +L+ R
Sbjct: 297 VRSYS-------ILIHGLTKAGQARETSNIFHAMKQQGFALDAR 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 108/259 (41%), Gaps = 6/259 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M ++ F + AY + + +V +A + L MK +
Sbjct: 306 GLTKAGQARETSNIFHAMKQQGFALDAR---AYNAVVDGFCKSGKVHKAYEILEEMKEKC 362
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + +D L K++ L++ G L N+++Y++++ +D
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL--NVVLYSSLIDGFGKVGRIDE 420
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K ++++E F M + + P + I
Sbjct: 421 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILIN 480
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A W + + G++P + ++ GL +G ++D E +
Sbjct: 481 GLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIP 540
Query: 240 YDVTMQKLKKAFYNESRSM 258
+ L + N +R+M
Sbjct: 541 DAASFNALIEGMSNANRAM 559
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G V EA + F +M++ NP + Y + + + ++ K + +
Sbjct: 201 GLGKKGQVDEAYRLFEKMLDAGHNANP---VVYTSLIRNFFIHGRKEDGHKIFKELIRRG 257
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P L + +D + K + +++ + GF +P++ Y+ ++ L
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQARE 315
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F M G D+ YN + + K+ KVH+ EM + QPT +
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ GI + L+ G +GR+ + EEM+ +
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 117/298 (39%), Gaps = 53/298 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN +A EM+ P V+ Y + + T+ + ++ A++F M
Sbjct: 317 GYCKVGNFHQALVLHSEMLR--NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------- 95
P +++ ++ + ++WD M+ GF
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L P+++ Y+ ++ C ++D F+ +MV G PD++TY+ + + L
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ ++++E + F EM+ P + I + A+ + + +++ G LP
Sbjct: 495 EQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
+ NVL+ GL R + +R L K FY+ES +D+L
Sbjct: 555 TYNVLINGLNKQARTREAKRL------------------LLKLFYDESIPNGITYDTL 594
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ + F EM ER P +V+ Y T + + K++DEA K LR M E
Sbjct: 212 GFCAAGNLEMGLRFFEEM-ERNRCLP-NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ ++ L ++ T + M GF P+ + YN +V C +
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGF--APDGVTYNTLVNGYCKVGNFHQA 327
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ +G PD +TY + + K ++ FF +M +P + + I
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRR 236
+ A IW+ ++ +G P + N LL G GR+ + +R + L+
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 237 ILIYDVTM------QKLKKAF 251
++ Y + Q+L +AF
Sbjct: 448 VVSYSTIIAGFCRYQELDRAF 468
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 56/306 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++G + EA + + EM+ P ++ Y L +++EA+ LR M+G+
Sbjct: 387 GFSQKGFMDEAYRIWDEMIR--SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL 444
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + +S + + + Q+ MV G +
Sbjct: 445 SPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACD 504
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L+P+ Y +++ C D++ D+M+ G PD++TYN++ L
Sbjct: 505 LFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLN 564
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF------------------ 189
K + E + ++ +E P N T T++ + EF
Sbjct: 565 KQARTREAKRLLLKLFYDESIP---NGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNE 621
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ P EA NV++ G G + + +EM++ + + VT+ L K
Sbjct: 622 ADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVK 681
Query: 250 AFYNES 255
A Y+E
Sbjct: 682 ALYSEG 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 4/226 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V+ A K + EM+ +V +Y + ++ L+F M+ C P + +
Sbjct: 184 VIFAEKVYREMIA--SGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTY 241
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + KL +L M G L PNL+ YN V+ LC ++ +M
Sbjct: 242 NTVIGAYCKLKRIDEAFKLLRSMGLEG--LEPNLLTYNMVINGLCRVGRIEETSGVLAEM 299
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G PD +TYN + K H+ EM++N P + + I + A
Sbjct: 300 DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNL 359
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A+E ++ + G+ P + L+ G G + + R +EM+
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+PN++ YN V+G C +D F+ M G P+ LTYNM+ L + ++ E
Sbjct: 235 LPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSG 294
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EM + + P + T + A+ + + +L NG+ P + L+ +
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRW 269
G L+ F ++M R + VT L F S + D R W
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGF-----SQKGFMDEAYRIW 401
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 9/228 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA + F EM+E+ P+ +L Y + R QVD+A M+ C
Sbjct: 229 GLCRGGKMKEAFELFEEMIEKDRIVPDQLL-YNVIIDGFCRQGQVDKARAIFGFMRKNEC 287
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ K D +++ M G P+ + Y A++G LC + VD
Sbjct: 288 EPNTFNYATLINGHCKKADIEAARSVFEEMRNSGVE--PDAVSYTALIGCLCRHGSVDEG 345
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
+M G D +TYN++ E L K+ + E + + LN A+
Sbjct: 346 IGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESV---PLEGVKLNVASYRIL 402
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L E + A+ + +L G LP A++N LL+GL + GR++D
Sbjct: 403 MNCLCSRGEMDRAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADA 450
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHE 154
++ PNL+ Y+ ++G LC + F F++M+ PD L YN+I + + +V +
Sbjct: 215 DVKPNLVTYSTLIGGLCRGGKMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDK 274
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
F M KNE +P N AT I + E A ++ + +G+ P S L+
Sbjct: 275 ARAIFGFMRKNECEPNTFNYATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIG 334
Query: 215 GLRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKK 249
L G + + V E+ ++ Y++ ++ L K
Sbjct: 335 CLCRHGSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCK 373
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V +Y + + K+VDEA+ + M +N P + +++ +D L K ++ ++L D
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + + I YN+++ LC N+ VD +M G PD TY ++ + L K
Sbjct: 396 EMHDRG--VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ + +N F +++ + T I D D + A+ + + + +NG +P +
Sbjct: 454 GGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKT 513
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++++ L + EM+ R +L
Sbjct: 514 YEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L + Q AL+ LR + G+ P + ++ +D + K+ L+
Sbjct: 162 VCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 221
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV G + P+++ Y+A++ C +++ F++M+ PD T++++ + K
Sbjct: 222 MVSKGIS--PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+V E +N M+K +P + + + + A I+N + + G+ S
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
N+++ G + ++ + +EM + I+ VT L
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 36 LITLIRG----KQVDEALKF------LRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
L TLI+G Q+ +AL F L + C+ TL ++ L K+ ++ +Q
Sbjct: 129 LTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL------INGLCKVGQTSAALQ 182
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + G + PN++MYN ++ +C V+ F + +MV G PD +TY+ +
Sbjct: 183 LLRRVDGK--LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
K+++ F++MI E P + + + A + +++ GI P
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 43/277 (15%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V EA + EMV + +P+ V+ Y + ++++A+ M E P + F
Sbjct: 212 VNEAFDLYSEMVSK-GISPD-VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
S +D K + +M+ G + P+++ Y +++ C V+ F+ M
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQG--IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G + +YN++ K KKV E N F EM P + + I L + +
Sbjct: 328 AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387
Query: 188 EFAIEI---------------WNYIL--------------------ENGILPLEASANVL 212
+A+++ +N IL + GI P + +L
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTIL 447
Query: 213 LVGLRNLGRLSDVRRFAEEML----NRRILIYDVTMQ 245
+ GL GRL D + E++L N + Y V +Q
Sbjct: 448 IDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQ 484
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ D +V +GF+L N + Y ++ LC + ++ P+ + YN
Sbjct: 144 QALHFHDKVVALGFHL--NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
I + + K K V+E + + EM+ P + + I+ + AI ++N ++
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I P + ++L+ G GR+ + + M+ + I
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
N P + + ++G L N +M F+G D +T+N++ C + H
Sbjct: 51 NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F ++K ++P + T I L + A+ + ++ G + L+ G
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170
Query: 216 LRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKK 249
L +G+ S +RR +++ +++Y+ + + K
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 208
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 59/158 (37%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN I ++ LC + F D++V G + + Y + L K +
Sbjct: 124 PNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQL 183
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ QP + T I + A ++++ ++ GI P + + L+ G
Sbjct: 184 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCI 243
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
LG+L+D +M++ I T L F E R
Sbjct: 244 LGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 16/231 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R +V+ Y L ++ KQ+ +A M G+ C+P
Sbjct: 499 KAGLIEQAQSWFDEM--RSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL--------------MPNLIMYNAVVG 109
+S +D L K + +++ ++G N+ PN++ Y A+V
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVN 616
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC V + D M+ G P+ + Y+ + + K ++ + F M K + P
Sbjct: 617 GLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLP 676
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ + I + + A+++ + +L++ P + ++ GL G
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
++A + ++ M + P ++ + L + L+ M +G N P++ Y
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN--PDVYTYT 491
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ C ++ +FD+M G P+ +TY + +K+K++++ + FH M+ +
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYIL----------------ENGILPLEASA 209
P + + I L A E + A E++ ++ + I P +
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611
Query: 210 NVLLVGLRNLGRLSDVRRFAEEML 233
L+ GL ++SD + ML
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAML 635
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 8/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T L ++ KQ+ + + +M E C P+ F++ + D + +L+
Sbjct: 305 NVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLF 364
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN------VFRFFDQMVFHGAFPDSLTYNM 141
+ M G P ++YN +G +C ++ N + +++M+ + +
Sbjct: 365 NRMNTCG--CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTAN 422
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + EM++ + P IT L A + A ++ + + G
Sbjct: 423 FARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVG 482
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ P + +L+ G + + + +EM + VT L A+
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAY 532
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 6/228 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + L + ++V +A L M C P + +D K+ + +++
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF 666
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G+ +P++ Y +++ + + +D + QM+ P+ +TY + + L
Sbjct: 667 LRMTKCGY--LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + N M K P + I L A + + +E++ + G P
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLN----RRILIYDVTMQKLKKAF 251
+ +L+ G L D +EM + + Y T+Q K F
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF 832
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ YN+++ LCNN V+ DQMV P+ +T+N + KNK V +
Sbjct: 248 PNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGEL 307
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEASANVLLV 214
F +M K P T +L+DA + E A ++ +L G+ P ++ N L+V
Sbjct: 308 FEDMPKQRITPN----VTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIV 363
Query: 215 GLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
GL G L R EM L ++ Y++ M L
Sbjct: 364 GLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSL 400
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G G V EA +MV E N ++ + L + K V +A + M +
Sbjct: 259 GLCNNGKVNEATTLRDQMVNSCLEPN---IITHNALLNGFCKNKMVKQAGELFEDMPKQR 315
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ +D K + L+ IM+G G + P++ YN ++ LC D++
Sbjct: 316 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG--VYPDVSTYNCLIVGLCRKGDLEG 373
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+M D +TYN++ + L ++ + EM K +P+ L T I
Sbjct: 374 ARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMI 432
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NK + E FE P+ V Y + + + +++A R+M G+ +P +
Sbjct: 298 NKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVST 357
Query: 67 FSNALDILVKLND---STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + L + D + + V D +L +LI YN ++ LCN ++ R
Sbjct: 358 YNCLIVGLCRKGDLEGARNRVSEMDTK-----HLKADLITYNILMDSLCNKGEMKKTLRL 412
Query: 124 FDQMVFHGAFPDSLTYNMIFE 144
D+M G P LTYN + +
Sbjct: 413 LDEMCKKGLKPSQLTYNTMID 433
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+V A K G M++ E V Y T + L +++EA + M C
Sbjct: 310 GLCQNGHVDHALKVLGLMLQ--EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + L N + L + G L PN+ +N ++ LC D
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKG--LSPNVYTFNILINALCKVGDPHLA 425
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F++M G PD +TYN++ + L + K+ + + EM + + + T I
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDG 485
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+++ + GI + N L+ GL N R+ D ++M++ +
Sbjct: 486 LCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545
Query: 241 DVT 243
+VT
Sbjct: 546 NVT 548
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ A + M E +P V + + +V +AL +++ +
Sbjct: 240 GFVEEGSIEAALRLKARMSE-MGCSPTSV-TVNVLINGYCKLGRVGDALGYIQQEIADGF 297
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P FS ++ L + H +++ +M+ G P++ Y+ V+ LCNN +++
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE--PDVYTYSTVINCLCNNGELEEA 355
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+QMV G PD+ T+N + L ++ E + E+ P I
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L +P A+ ++ + +G P E + N+L+ L + G+L+ +EM
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM 467
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+ A + F EM + P+ V Y + L ++ +AL L+ M+ C +
Sbjct: 418 KVGDPHLAVRLFEEM-KSSGCTPDEV-TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIM--VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
++ +D L K +++D M GIG N I +N ++ LCN +D+
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG----RNAITFNTLIDGLCNAERIDDAA 531
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
DQM+ G P+++TYN I K + + + M N ++ + AT I L
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + A+++ + G+ P + N ++ L
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 80/210 (38%), Gaps = 3/210 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P+ + Y T + L + ++++EA + M F+ +D L +
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M+ G L PN + YN+++ C ++ M +G D +TY +
Sbjct: 533 LVDQMISEG--LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLING 590
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K ++ M +PTP I L + A+ ++ + E G P
Sbjct: 591 LCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPD 650
Query: 206 EASANVLLVGL-RNLGRLSDVRRFAEEMLN 234
+ ++ GL R G + + F EM +
Sbjct: 651 AFTYKIVFRGLCRGGGPIKEAFDFLVEMAD 680
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 59/137 (43%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F + N +YN ++ +L + + + + +M G PD +T+N + + L + ++
Sbjct: 155 FGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQART 214
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
EM + P T + ++ E A+ + + E G P + NVL+
Sbjct: 215 AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLIN 274
Query: 215 GLRNLGRLSDVRRFAEE 231
G LGR+ D + ++
Sbjct: 275 GYCKLGRVGDALGYIQQ 291
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 85/223 (38%), Gaps = 9/223 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + EA + F +M + + + T + L +++D+A + + M E
Sbjct: 485 GLCKRRRIEEAEEVFDQM--DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGL 542
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L K + + + M GF + +++ Y ++ LC
Sbjct: 543 QPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV--DVVTYATLINGLCKARRTQAA 600
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P YN + + L + + + F EM + P
Sbjct: 601 LKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRG 660
Query: 181 LLDADEPEFAIEIWNYILE---NGILPLEASANVLLVGLRNLG 220
L P E +++++E NG +P +S +L GL NLG
Sbjct: 661 LCRGGGP--IKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EA FL M + P + +S A+ L+++ + +QL+ + G P+++ N
Sbjct: 555 EACNFLDSMVQQGFLPDIVSYSAAIGGLIQIQELNRALQLFSDLYSRGH--CPDVVASNI 612
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ LC V + D++V G FP +TYN++ + KN V + M +
Sbjct: 613 LMRGLCKAYRVREAEKLLDEIVVKGFFPSVVTYNLLIDSWCKNGSVDKAMALLSRMSGED 672
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+P + +T + A+ P+ A+ +WN + G P + + L+ GL R +
Sbjct: 673 REPNVITYSTLVDGFCRAERPDDALLVWNEMERKGCFPNQIAFMALIYGLCKCCRPTTAL 732
Query: 227 RFAEEM 232
+ EM
Sbjct: 733 HYLREM 738
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 54/257 (21%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENC-----------------FPTLKFFSNAL 71
VL Y L + +DEA +FLR+M FP FS +
Sbjct: 380 VLIYNAVLTCYVNDGLMDEACRFLRMMIQSKASGDVQMDGFFNKVKKLVFPNGASFSIVI 439
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
+ L+K + + L++ M F P++++YN ++ LC++N ++ +M G
Sbjct: 440 NGLLKNDQLDLALSLFNDMKQ--FVDRPSVLIYNNLINSLCDSNRLEESRELLREMKESG 497
Query: 132 AFPDSLTYNMIFECLIKNKKV--------------H---------------------EVE 156
P TYN I+ CL K K V H E
Sbjct: 498 VEPTHFTYNSIYGCLCKRKDVLGAIDMLKGMRACGHEPWIKNSTLLVKELCDHGMAIEAC 557
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
NF M++ + P ++ + AI L+ E A+++++ + G P ++N+L+ GL
Sbjct: 558 NFLDSMVQQGFLPDIVSYSAAIGGLIQIQELNRALQLFSDLYSRGHCPDVVASNILMRGL 617
Query: 217 RNLGRLSDVRRFAEEML 233
R+ + + +E++
Sbjct: 618 CKAYRVREAEKLLDEIV 634
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
W K G+V +A M E +V+ Y T + R ++ D+AL M+ + CF
Sbjct: 652 WCKNGSVDKAMALLSRMSG--EDREPNVITYSTLVDGFCRAERPDDALLVWNEMERKGCF 709
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P F + L K T + M ++ P+ +Y A++ ++ D+ + F
Sbjct: 710 PNQIAFMALIYGLCKCCRPTTALHYLREMEQK--DMKPDSFIYIALISSFLSDMDLASAF 767
Query: 122 RFFDQMVFHGAFPDS--LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
F +MV+ G FP+S Y+++ + + K K H + +++ PT +CA
Sbjct: 768 EIFKEMVYSGYFPESHDKNYSIVMDAIDKFSKDHRTSSGIQVLMEEGKLPT--HCA 821
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 100/273 (36%), Gaps = 55/273 (20%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + + M E+ W HV + ++ + VD+A + + M+G K F
Sbjct: 226 EALRVYNVMREK-GWVDGHVCSM--LALSFSKWGDVDKAFELVERMEGHGMRLNEKTFCV 282
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ VK +QL+DIM +GF P + +++ ++G LC N D +M
Sbjct: 283 LIHGFVKEGRVDRALQLFDIMCRVGFT--PPVSLFDVLIGGLCRNGDSHRALSLLSEMKE 340
Query: 130 HG-------------AFPDS--------------------LTYNMIFECLIKNKKVHEVE 156
G AFPD L YN + C + + + E
Sbjct: 341 FGVTPDVGIFTKLISAFPDRGVIAKLLEEVPGGEEERTLVLIYNAVLTCYVNDGLMDEAC 400
Query: 157 NFFHEMIKNEWQ-----------------PTPLNCATAITMLLDADEPEFAIEIWNYILE 199
F MI+++ P + + I LL D+ + A+ ++N + +
Sbjct: 401 RFLRMMIQSKASGDVQMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFNDMKQ 460
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P N L+ L + RL + R EM
Sbjct: 461 FVDRPSVLIYNNLINSLCDSNRLEESRELLREM 493
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 2/186 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+A + L + +V EA K L + + FP++ ++ +D K + L
Sbjct: 607 VVASNILMRGLCKAYRVREAEKLLDEIVVKGFFPSVVTYNLLIDSWCKNGSVDKAMALLS 666
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN+I Y+ +V C D+ +++M G FP+ + + + L K
Sbjct: 667 RMSGE--DREPNVITYSTLVDGFCRAERPDDALLVWNEMERKGCFPNQIAFMALIYGLCK 724
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ EM + + +P I+ L + A EI+ ++ +G P
Sbjct: 725 CCRPTTALHYLREMEQKDMKPDSFIYIALISSFLSDMDLASAFEIFKEMVYSGYFPESHD 784
Query: 209 ANVLLV 214
N +V
Sbjct: 785 KNYSIV 790
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 6/225 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T + L + + + LR ++G + P L ++ + L K L+
Sbjct: 167 VSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSE 226
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G + PN+ Y ++ C ++ F ++M PD T+N++ + L K
Sbjct: 227 MIVKGIS--PNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKE 284
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ E + F EM P + + I L E AI + + E GI P S
Sbjct: 285 GKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSY 344
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKA 250
+LL L GRL + ++F + +L + + Y+V + L KA
Sbjct: 345 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 389
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GN+ EA EM + NP+ V + + L + ++DEA+ MK +N
Sbjct: 245 GFCIMGNLKEAFSLLNEMKLK-NINPD-VYTFNILIDALAKEGKIDEAMSLFEEMKHKNM 302
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +++ +D L K + + L M G + PN+ Y ++ LC ++N
Sbjct: 303 FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG--IQPNVYSYTILLDALCKGGRLENA 360
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+FF ++ G + TYN++ L K +V + +M P + T I
Sbjct: 361 KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICA 420
Query: 181 LLDADEPEFAIEIWNYILENGIL 203
LL+ DE + A + ++ G+L
Sbjct: 421 LLEKDENDKAEKFLREMIARGLL 443
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 89/228 (39%), Gaps = 6/228 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + L +L++ K+ + + + P L S ++ L T
Sbjct: 58 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++ ++ G++ PN I N ++ LC ++ F D++V G D ++Y +
Sbjct: 118 VFANILKRGYH--PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLING 175
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K + V ++ + +P + T I L A ++++ ++ GI P
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPN 235
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKK 249
+ L+ G +G L + EM +N + +++ + L K
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%)
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M+ P + +N I L+KNK+ V + F + N P + I
Sbjct: 49 FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
FA ++ IL+ G P + N L+ GL G + F ++++ +
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ 160
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 148 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L GL GR D + EML+
Sbjct: 324 EGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLS 374
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 172 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 292 LKQAHHLIDEM 302
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + +
Sbjct: 287 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALXSGLCQEGRSV 363
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 59/138 (42%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 135 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 194
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254
Query: 220 GRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 255 GRVDLAMEIYKQMLSQSL 272
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 6/270 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GNV A K F EM R + P+ ++ Y + + + + ++ EA + M +
Sbjct: 356 GFCKLGNVSAACKLFDEM-RRKKIVPD-IVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K + + + MV G L PN++ Y A+ LC N ++D
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG--LTPNVVTYTALADGLCKNGEIDVA 471
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G P+ TYN I L K + + EM + P + T +
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A E+ +L + P + NVL+ G G L D R E ML + I+
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 241 DVTMQKLKKAFY--NESRSMRDRFDSLERR 268
T L K + N R+ + + ++ R
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA+ +M +R N V++Y + R ++D+ LK + +KG+ P
Sbjct: 256 GKVREAHNLLVQMTDR--GNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEY 313
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++N + +L K + QL M G + P+ ++Y V+ C +V + FD
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWG--VFPDNVVYTTVISGFCKLGNVSAACKLFD 371
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TY + + K+ K+ E F+EM+ +P + I A
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG 431
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
E + A + N +++ G+ P + L GL G + EM
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 113/296 (38%), Gaps = 39/296 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +VEA + F EM+ + P+ V Y + + ++ EA M +
Sbjct: 391 GICKSGKMVEAREMFNEMLVK-GLEPDEV-TYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ D L K + +L M G L PN+ YN +V LC +++
Sbjct: 449 TPNVVTYTALADGLCKNGEIDVANELLHEMSRKG--LQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP------LNC 174
+ ++M G +PD++TY + + K ++ + M+ QPT +N
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566
Query: 175 ATAITMLLDADE---------------------PEFAI--------EIWNYILENGILPL 205
ML D + ++ I EI+ + + G++P
Sbjct: 567 FCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPD 626
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
+ N+L+ G + + +EM+ + + T L + FY + + R
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 7/234 (2%)
Query: 19 VERFEWNPEHVLAYETF-----LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
V+ FE PE + + T L L + +V EA L M FP + + +
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
++ + ++L D + G G L P+ +YN ++ LLC N +V + M G F
Sbjct: 287 YCRIGELDKVLKLVDELKGKG--LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD++ Y + K V F EM + + P + + I + + + A E+
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+N +L G+ P E + L+ G G + + +M+ + + VT L
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ Y VV C ++D V + D++ G PD YN I L KN +V E E
Sbjct: 275 PDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL 334
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M K P + T I+ A ++++ + I+P + ++ G+
Sbjct: 335 LRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICK 394
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
G++ + R EML + + +VT L Y ++ M++ F
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDG-YCKAGEMKEAFS 438
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V +A EM +R + P+ ++Y F+ L + +EA K M + C
Sbjct: 312 GYIGMGKVEKAFAVMEEMADR-DCAPD-TISYTMFIEALYSIGRREEAEKVFETMVEKGC 369
Query: 61 FPTLKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + +D K + +TH ++L D + PN +Y ++ ++ +
Sbjct: 370 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA-----VKPNRYIYTMIMDGFVKSSRL 424
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI--KNEWQPTPLNCA 175
+ + +++ G P ++TYN + L K KK+ E EM K E +P+ + +
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 484
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
I L E A ++ +++NG++P + L+ L G++S EEML
Sbjct: 485 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 544
Query: 236 RILIYDVTMQKL 247
I D T L
Sbjct: 545 GIFPDDHTYGTL 556
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 45/295 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V A F EM+ R + P+ ++AY + + L + +VDEA K + +M
Sbjct: 207 GLCKAHKVERACDVFEEMI-RKGYKPD-IIAYSSLIDGLSKAGRVDEARKLVDLMVARGP 264
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT +++ + L K V+ M + Y+ +V V+
Sbjct: 265 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD--TYSFIVTGYIGMGKVEKA 322
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP----------- 169
F ++M PD+++Y M E L + E E F M++ +P
Sbjct: 323 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 382
Query: 170 ----TPLNCATAITMLLD--ADEP------------------EFAIEIWNYILENGILPL 205
+ AT + L+D A +P E A+E++ IL++GILP
Sbjct: 383 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 442
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRR------ILIYDVTMQKLKKAFYNE 254
+ N ++ L L ++ + EM R+ I+ Y + + L K E
Sbjct: 443 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 497
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 15/228 (6%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+ L+ L+RG + +AL F + E P + F+ L +D L M
Sbjct: 101 SLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKSR 157
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + N + ++ LC D+D +F+ + + P TY ++ + L K KV
Sbjct: 158 G--ITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVE 215
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ F EMI+ ++P + ++ I L A + A ++ + ++ G P + ++
Sbjct: 216 RACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIV 275
Query: 214 VGLRNLGRLSDVRRFAEEMLNRR----------ILIYDVTMQKLKKAF 251
GL GR+ + + +EM RR I+ + M K++KAF
Sbjct: 276 AGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAF 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 4/221 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A ++++ P + Y + ++ +++EAL+ + + + P+
Sbjct: 385 KEGSMAAATHVL-RLMDKAAVKPNRYI-YTMIMDGFVKSSRLEEALELYQRILKDGILPS 442
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ L KL ++L M L P+++ Y+ ++ L + F
Sbjct: 443 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 502
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ +G PD TY + + L KV EM+K P T + +L
Sbjct: 503 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR 562
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLR-NLGRLS 223
+D + A ++ ++ NG P E + + G R L RLS
Sbjct: 563 SD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRLQLDRLS 602
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 64/158 (40%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P L Y +V LC + V+ F++M+ G PD + Y+ + + L K +V E
Sbjct: 196 PTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL 255
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ PT + + + L + A++ + + P + + ++ G
Sbjct: 256 VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 315
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+G++ EEM +R ++ +A Y+ R
Sbjct: 316 MGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 353
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K+G V+EA + MV++ Y + L + +VD+A + R M+G+
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKT--YTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + ++ KL + ++D MV G L PN+I+YN ++G C + +++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+++TY I + K+ + E F EM P T +
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 182 LDADEPEFAIEIWN 195
++ E AI I+
Sbjct: 743 CRLNDVERAITIFG 756
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG + +A F M+ P+ AY + + R K V + + L MK N
Sbjct: 358 SKEGVMEKAKALFDGMIAS-GLIPQ-AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ + + + D + M+ G PN+++Y ++ N+ + R
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR--PNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+M G PD YN + L K K++ E +F EM++N +P I+ +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRN----LGRLSDVRRFAEEMLNRRIL 238
+A E A + + E G+LP VL GL N G++ + M+++ IL
Sbjct: 534 EASEFASADKYVKEMRECGVLP----NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 239 ----IYDVTMQKLKK 249
Y V M L K
Sbjct: 590 GDAKTYTVLMNGLFK 604
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 42/208 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ +A+ F EMVE E +V+ Y L R ++++A + L M +
Sbjct: 636 GFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K D +L+D M G L+P+ +Y +V C NDV+
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG--LVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 FRFFDQ---------------------------------MVFHGAF-----PDSLTYNMI 142
F + G+F P+ +TYN++
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ L K + + FH+M PT
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPT 839
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ +E NV + + EM +R +P Y T + + +D A ++ M
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ + ++ + +++ M G + P++ YN+++ L +D
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--IAPDIFCYNSLIIGLSKAKRMDE 505
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +MV +G P++ TY I+ + + + EM + P + C I
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A + +++ GIL + VL+ GL ++ D EM + I
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 7/231 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ + L + K++++A L M +S +D L+K ++ L MV
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G N+ P MY+ + ++ ++ FD M+ G P + Y + E + K
Sbjct: 340 SHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + EM K +P T + + + + + A I ++ +G P
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA-FYNESRS 257
L+ R D R +EM + I Y+ + L KA +E+RS
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 94/240 (39%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ EA + F EM + + Y T + R V+ A+ K + C
Sbjct: 706 GYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGC 762
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM--PNLIMYNAVVGLLCNNNDVD 118
+ F+ ++ + K + ++ + ++ F+ PN + YN ++ LC +++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F QM P +TY + K + E+ F E I +P + + I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 179 TMLLDADEPEFAIEIWNYI-----LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A+ + + + +++G ++ LL G +G + + E M+
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P Y+ ++ LC +++ +M G D+ TY+++ + L+K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ HEM+ + P I ++ E A +++ ++ +G++P +A A L+
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP-QAQAYASLI- 389
Query: 216 LRNLGRLSDVRRFAE---EMLNRRILIYDVTMQKLKKA 250
R +VR+ E EM R I+I T + K
Sbjct: 390 -EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y T + L K++DEA + +K C P + ++ +D L+K ++ ++
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + +P Y V+ LC + + + F+QMV G PD++TY + + K
Sbjct: 168 EMSG--SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E M+ +PT + + + D A E+ + E G P
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
LL + GR + + EM R + L ++ R R FDS+
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 36/254 (14%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA F M+E+ P+ L Y T + + V+ A + L +M P
Sbjct: 332 GRVPEARHVFDSMIEK-GCAPD-ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF 389
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIG-------FNLM-------------------- 98
+++ +D VKL ++D MV G FN++
Sbjct: 390 AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEM 449
Query: 99 -------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
P L+ Y ++ L V F F +M+ G P+ TY + L K +
Sbjct: 450 LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGR 509
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ E + +M+K P + IT L+D+ + A +++ +++ G P E + V
Sbjct: 510 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 569
Query: 212 LLVGLRNLGRLSDV 225
L G R GR D+
Sbjct: 570 LRRGFRAAGRALDL 583
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 13/248 (5%)
Query: 12 NKTFGEMVERFE------WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
+K E E FE +P +V+AY + L++ ++++ LK M G +C PT
Sbjct: 121 SKRIDEACELFEELKTAGCSP-NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D L K ++++ MV G +P+ I Y ++ + +D + D
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKG--CVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ G P ++TY I K ++E + +M + +P + ++ L
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYD 241
E A ++ + G P L+ L + GR+ + R + M+ + L Y
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 242 VTMQKLKK 249
+Q K
Sbjct: 358 TIIQNFSK 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 4/259 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + +A K F +MV++ P+ + Y T + + ++DEA K L VM +
Sbjct: 187 GLCKAQMLPDACKVFEQMVQK-GCVPD-TITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT + + + KL+ ++ M G P L ++ +++ + +
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE--PGLFIFTSLLSYYLSKGRAEEA 302
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ +M G PD + Y + + L +V E + F MI+ P L T I
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A EI + ++G+ P + N L+ G L R+ + M+ I
Sbjct: 363 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422
Query: 241 DVTMQKLKKAFYNESRSMR 259
VT L + + ++ R
Sbjct: 423 AVTFNVLMHGLFKDGKTDR 441
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 5/239 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + +M ER P + + + L + + +EA + L M C
Sbjct: 257 GFCKLDMINEAKEVIAQMRER-GCEP-GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D+L ++D M+ G P+ + Y ++ +V+
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG--CAPDALTYGTIIQNFSKIGNVEAA 372
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD YN + + +K ++V + + M+ + +P + +
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 432
Query: 181 LLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + + A ++ +LE + P S +L+ GL GR+S+ +EM++R I+
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGII 491
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 6/228 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+++Y T + L ++DEA KF M C P + F+ + K +L +
Sbjct: 7 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ P++ +Y +V+ C D+D + + V A D ++Y + + L
Sbjct: 67 QALK---RFRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLAD 120
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+K++ E F E+ P + I LL A E ++ + + + +P +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
V++ GL L D + E+M+ + + +T L F S+
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 228
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K+G V+EA + MV++ Y + L + +VD+A + R M+G+
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKT--YTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + ++ KL + ++D MV G L PN+I+YN ++G C + +++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+++TY I + K+ + E F EM P T +
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 182 LDADEPEFAIEIWN 195
++ E AI I+
Sbjct: 743 CRLNDVERAITIFG 756
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG + +A F M+ P+ AY + + R K V + + L MK N
Sbjct: 358 SKEGVMEKAKALFDGMIAS-GLIPQ-AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ + + + D + M+ G PN+++Y ++ N+ + R
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR--PNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+M G PD YN + L K K++ E +F EM++N +P I+ +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRN----LGRLSDVRRFAEEMLNRRIL 238
+A E A + + E G+LP VL GL N G++ + M+++ IL
Sbjct: 534 EASEFASADKYVKEMRECGVLP----NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 239 ----IYDVTMQKLKK 249
Y V M L K
Sbjct: 590 GDAKTYTVLMNGLFK 604
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 42/208 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ +A+ F EMVE E +V+ Y L R ++++A + L M +
Sbjct: 636 GFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K D +L+D M G L+P+ +Y +V C NDV+
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG--LVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 FRFFDQ---------------------------------MVFHGAF-----PDSLTYNMI 142
F + G+F P+ +TYN++
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ L K + + FH+M PT
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPT 839
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ +E NV + + EM +R +P Y T + + +D A ++ M
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ + ++ + +++ M G + P++ YN+++ L +D
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--IAPDIFCYNSLIIGLSKAKRMDE 505
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +MV +G P++ TY I+ + + + EM + P + C I
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A + +++ GIL + VL+ GL ++ D EM + I
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 7/231 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ + L + K++++A L M +S +D L+K ++ L MV
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G N+ P MY+ + ++ ++ FD M+ G P + Y + E + K
Sbjct: 340 SHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + EM K +P T + + + + + A I ++ +G P
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA-FYNESRS 257
L+ R D R +EM + I Y+ + L KA +E+RS
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 94/240 (39%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ EA + F EM + + Y T + R V+ A+ K + C
Sbjct: 706 GYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGC 762
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM--PNLIMYNAVVGLLCNNNDVD 118
+ F+ ++ + K + ++ + ++ F+ PN + YN ++ LC +++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F QM P +TY + K + E+ F E I +P + + I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 179 TMLLDADEPEFAIEIWNYI-----LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A+ + + + +++G ++ LL G +G + + E M+
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P Y+ ++ LC +++ +M G D+ TY+++ + L+K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ HEM+ + P I ++ E A +++ ++ +G++P +A A L+
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP-QAQAYASLI- 389
Query: 216 LRNLGRLSDVRRFAE---EMLNRRILIYDVTMQKLKKA 250
R +VR+ E EM R I+I T + K
Sbjct: 390 -EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALSVLNGMIKSGCKPNVHV--YNTLINGLAGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 67/187 (35%), Gaps = 35/187 (18%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS--------------------------- 136
Y+A++ LC ++D + M+ G P+
Sbjct: 132 YSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMG 191
Query: 137 --------LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+TYN + L KN+ E N E++ P + + + L + E
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+++WN + G P N+L+ GL ++G++ +M + V+ L
Sbjct: 252 RALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLM 311
Query: 249 KAFYNES 255
+ FY +
Sbjct: 312 EGFYKDG 318
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 4/272 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G+ EA++ F M + AY + L +L RG + EA++ L + +
Sbjct: 417 SKLGHSSEAHRLFCNMWSFHDGGDRD--AYISMLESLCRGGKTVEAIELLSKVHEKGIST 474
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ L L KL +H L++ M G P++ YN ++ L V
Sbjct: 475 DTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG--PFPDIFTYNILISSLGRVGKVKEAVE 532
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+++ PD ++YN + CL KN V E F EM P + +T I
Sbjct: 533 VFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFG 592
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
D+ E A +++ ++ G P + N+LL L GR ++ ++ + + +
Sbjct: 593 KTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSI 652
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
T L + +R R R + W S +
Sbjct: 653 TYAILDRLQSGSNRKFRVRRQNPITGWVVSPL 684
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + +Q+D + K + MK ++C P ++ + + K+ + ++ L++
Sbjct: 269 IFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFE 328
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G PNLI YN ++ L + VD F M+ + P+ TY++I L+
Sbjct: 329 EMLTKG--CTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVA 386
Query: 149 NKK------VHEVENFF 159
+ V EV N F
Sbjct: 387 EGQLGRLDEVLEVSNKF 403
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
++ DS ++ M G+ L ++ YN ++ L + +D ++ F M P
Sbjct: 245 IRSRDSDRAFNVYMEMWSNGYQL--DIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 302
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D TY ++ K + E F EM+ P + T I L + + AI ++
Sbjct: 303 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 362
Query: 195 NYILENGILPLEASANVL---LVGLRNLGRLSDVRRFAEEMLNRRILIYDV-TMQKL 247
+++N P E + +++ LV LGRL +V + + +N+ I Y V T+ KL
Sbjct: 363 CNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKL 419
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 7/237 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++E + P+ V++Y T + R ++D+ K + MK + P + + + +L ++
Sbjct: 694 LMELKGYTPD-VISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ + M+G G ++P+ I+Y +V C D+ +FF +M PD L
Sbjct: 753 CKLAEAEEAFSEMIGQG--ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVL 810
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY I + + E FHEM+ +P + + A + A + N++
Sbjct: 811 TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHM 870
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
++ G P + L+ GL G L EM L I Y+ + L K+
Sbjct: 871 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A+K F EM R + P+ VL Y + + + EA K M
Sbjct: 783 GFCKRGDIRAASKFFYEMHSR-DITPD-VLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ ++ K ++ + M+ G + PN++ Y ++ LC D+D+
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSA 898
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
+M G P+ TYN I L K+ + E E++ LN T T
Sbjct: 899 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV-----GEFEAAGLNADTVTYT 953
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+DA E + A EI +L G+ P + NVL+ G G L D + ML +
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013
Query: 236 RILIYDVTMQKLKKAF 251
I T L K +
Sbjct: 1014 GIAPNATTFNCLVKQY 1029
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 6/189 (3%)
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
L ++N++ H + L ++ G+ P++I Y+ V+ C ++D V++ ++M G
Sbjct: 682 LGRINEAHHLLLLMELK---GYT--PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK 736
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P+S TY I L + K+ E E F EMI P + T + + A +
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + I P + ++ G +G + + + EML R + +T +L Y
Sbjct: 797 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG-YC 855
Query: 254 ESRSMRDRF 262
++ ++D F
Sbjct: 856 KAGHIKDAF 864
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 10/165 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA K GE E N + V Y T + + ++D+A + L M G+
Sbjct: 923 GLCKSGNIEEAVKLVGEF-EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ F+ N + L D + W + GI PN +N +V C N++
Sbjct: 981 QPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIA----PNATTFNCLVKQYCIRNNL 1035
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ M G PD TY + + + + E F EM
Sbjct: 1036 KAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 56/138 (40%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N+ YN V+ +C ++ M G PD ++Y+ + + ++ +V
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+M + +P + I +L + A E ++ ++ GILP L+ G
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 220 GRLSDVRRFAEEMLNRRI 237
G + +F EM +R I
Sbjct: 788 GDIRAASKFFYEMHSRDI 805
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
YE + +L + ++D A K + MK +N P+ F++ +D + K +++++ M
Sbjct: 322 YELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVY--ME 379
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
GF L P+ MY +++ ++ R +D+M G P+ Y M+ E K+ K
Sbjct: 380 MQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGK 439
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F +M K + PTP + + M + + + A++++N + G+ P ++
Sbjct: 440 LETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTA 499
Query: 212 LLVGLRNLGRLSDV 225
LL L N +L DV
Sbjct: 500 LLTLLAN-KKLVDV 512
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A K F EM E+ P L + + + ++ + ++D ++K M+G P+
Sbjct: 331 KSGRLDAAFKLFQEMKEK-NLRPS-FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPS 388
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ VK +++WD M GF PN +Y VV + ++
Sbjct: 389 ATMYVSLIESFVKAGKLETALRIWDEMKKAGFR--PNYGLYTMVVESHAKSGKLETAMSV 446
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P TY+ + E + +V ++ M +P L+ TA+ LL
Sbjct: 447 FSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPG-LSTYTALLTLL 504
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN+++ L N F ++ M G D TY ++ L K+ ++ F EM
Sbjct: 287 YNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMK 346
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ +P+ L A+ + + A + +++++ + G+ P L+ G+L
Sbjct: 347 EKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLE 406
Query: 224 DVRRFAEEM 232
R +EM
Sbjct: 407 TALRIWDEM 415
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG VEA K +M++R +P+ + Y + + ++D+A + M ++CFP
Sbjct: 266 KEGKFVEAEKLHDDMIKR-SIDPD-IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ + K +L+ M G L+ + + Y ++ L ++ D DN +
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQKV 381
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G PD +TY+++ + L N K+ + F M K+E + T I +
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + + +++ + G+ P + N ++ GL
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ +A+ + M P F+ + L N ++
Sbjct: 73 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 132
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G PNL+ Y VV LC D+D F ++M D + +N I
Sbjct: 133 AVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 190
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + V + N F EM +P + ++ I+ L A ++ + ++E I
Sbjct: 191 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 250
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+ + + ++M+ R I T L F M DR
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF-----CMHDRL 305
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 306 DKAKQMFE 313
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M + P L F+ +D VK +L
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 277
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + P++ YN+++ C ++ +D + F+ MV FPD TYN + +
Sbjct: 278 DDMIKRSID--PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 335
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K+V + F EM + T I L + + A +++ ++ +G+ P
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL GL N G+L + M + I IY ++ + KA
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV+R P +++ Y + L + +D A L M+ + F+
Sbjct: 132 EAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L+ M G + PN++ Y++++ LC+ + + M+
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + +K K E E +MIK P + I D +
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ P + N L+ G R+ D EM +R ++ VT L +
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 250 AFYNES 255
+++
Sbjct: 368 GLFHDG 373
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+ A K F +MV + P ++ Y L L ++++AL+ M+
Sbjct: 368 GLFHDGDCDNAQKVFKQMVS--DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ ++ + K + WD+ + + PN++ YN ++ LC+ +
Sbjct: 426 KLDIYIYTTMIEGMCK---AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M G PDS TYN + +++ EM
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V + + F EM R + Y T + L D A K + M +
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S LD L ++++D M L ++ +Y ++ +C VD+
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--DIYIYTTMIEGMCKAGKVDDG 448
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+ F + G P+ +TYN + L + + E +M E P P
Sbjct: 449 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLP 497
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + +++A+ + M C P K + + L ++ +++
Sbjct: 475 NVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + GF+L +L+ YN ++GL C+ N+ + V+ M G PDS+TYN +
Sbjct: 535 EKLREGGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFG 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI-LENGILPLE 206
K+K VE +M ++E PT I E A++++ + L + + P
Sbjct: 593 KHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNT 652
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
N+L+ LG EEM
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGE-----NCFPTLKF-FSNALDILVKLNDSTHTVQLWDIMV 91
TL + ++VDEAL+ M G+ N F+ +D L K+ +L + +
Sbjct: 338 TLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRM 396
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ +PN + YN ++ C ++ +M G PD +T N I + ++
Sbjct: 397 KMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHG 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ FF +M K + + T I E A+ ++ +LE G P
Sbjct: 457 LNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYA 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ GL + R D R E++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKL 537
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/168 (17%), Positives = 70/168 (41%), Gaps = 2/168 (1%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+E+ P+ + Y T + + K + + + M+ + PT+ + ++ +
Sbjct: 572 MEKEGMKPDSI-TYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVG 630
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ ++L+ M G+ + PN ++YN ++ + ++M P+ T
Sbjct: 631 ELGEALKLFKDM-GLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
YN +F+CL + + + EM++ +P + + L +DE
Sbjct: 690 YNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEILMERLSGSDE 737
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 8/218 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK-GE 58
K V EA + F +M + + + A TLI G ++ EA + L MK E
Sbjct: 341 KSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEE 400
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P ++ +D + ++ M G P+++ N +VG +C ++ ++
Sbjct: 401 RCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIK--PDVVTVNTIVGGMCRHHGLN 458
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
FF M G + +TY + + + ++F +M++ P I
Sbjct: 459 MAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALI 518
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ L AI + + E G L+ A +L+GL
Sbjct: 519 SGLCQVRRDHDAIRVVEKLREGG-FSLDLLAYNMLIGL 555
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALYVLNGMIKSGCKPNVHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F N Y D++L L + + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGFCKN-----GYS------------DKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + + + + M+ G PN+ +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK--PNVHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L KN+ E N E++ P + + +
Sbjct: 183 AIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN + G P N+L+ GL ++G++ +M +
Sbjct: 243 GLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
V+ L + FY +
Sbjct: 303 NLVSHNTLMEGFYKDG 318
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 9/253 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G++V ANK FGE+ +R W P+ Y + ++ +A+K + M
Sbjct: 245 GYSSRGDMVNANKVFGELFDR-GWLPDAT-TYTILMNGYCEQGRLADAIKLMDDMGENGV 302
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ K + L D M+ + +P+ + V+ +LC ++
Sbjct: 303 EPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQY--VPSSALCCKVIDVLCEAGKIEEA 360
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M+ PD+ + + L K KV E F E + P+ L T I
Sbjct: 361 CELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI-PSLLTYNTLIAG 419
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
+ + E A ++W+ ++E G P + N+L+ G +G + R EEML+ R +
Sbjct: 420 MCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPN 479
Query: 239 --IYDVTMQKLKK 249
Y + +++L K
Sbjct: 480 KSTYAILIEELCK 492
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V + L + V+ A+K L M P + ++ L D + +++
Sbjct: 200 NVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVF 259
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ G+ +P+ Y ++ C + + + D M +G P+ +TY ++ E
Sbjct: 260 GELFDRGW--LPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYC 317
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K KK E N +M++ ++ P+ C I +L +A + E A E+W +L+ +P A
Sbjct: 318 KEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNA 377
Query: 208 SANVLLVGLRNLGRLSDVRRFAEE 231
+ L+ L G++ + R+ E
Sbjct: 378 IMSTLIHWLCKEGKVWEARKLFGE 401
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ ++PN+ N ++ LC NDV++ + D+M G P+ +TY I +
Sbjct: 195 YGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVN 254
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILENGILPLEASAN 210
F E+ W P AT T+L++ + AI++ + + ENG+ P E +
Sbjct: 255 ANKVFGELFDRGWLPD----ATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYG 310
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRR 236
V++ + + R ++ML R+
Sbjct: 311 VMVEAYCKEKKAGEARNLLDDMLERQ 336
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 9/243 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y T L ++R K+ +A + MK P +++ L++ + S + ++
Sbjct: 295 NVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVY 354
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF-PDSLTYNMIFECL 146
M G G ++ +L YN ++ + + D F +M G PDS T++ +
Sbjct: 355 KEMKGNGMDMTADL--YNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIY 412
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ KV EVE +EMI++ +QPT + I A + ++I+ +L+ GI+P +
Sbjct: 413 SRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPND 472
Query: 207 ASANVLLVGLRN-----LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
LL L LG+L+D A L ++ Y V Q+ + F E+ + +
Sbjct: 473 HFCCCLLNVLTQTPKEELGKLTDCIEKANTKLG-TVVRYLVEEQESDEGFRKETLELLNS 531
Query: 262 FDS 264
D+
Sbjct: 532 IDA 534
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 4/192 (2%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A K F EM++R P+++ + T + ++A++ M G C P S
Sbjct: 175 AEKLFDEMLQR-GVKPDNI-TFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSGM 232
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ + N+ V L+D ++L + + ++ ++ + + D + +M
Sbjct: 233 VYAYARTNNVDKAVNLYDRAKAENWSL--DAVTFSTLIKMYSMAGNYDKCLEVYQEMKVL 290
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P+ TYN + ++++KK + + EM N P + A+ + + A E A
Sbjct: 291 GVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDA 350
Query: 191 IEIWNYILENGI 202
+ ++ + NG+
Sbjct: 351 LGVYKEMKGNGM 362
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 4/242 (1%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
E + F P+ + + R VD+A+ K EN FS + +
Sbjct: 215 EKMSGFGCEPDGITC-SGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSM 273
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ ++++ M +G + PN+ YN ++G + + +M +G PD
Sbjct: 274 AGNYDKCLEVYQEMKVLG--VKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDF 331
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+TY + E + + + + EM N T + M D + A+EI+
Sbjct: 332 ITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYE 391
Query: 197 ILENGIL-PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ +G P + + L+ G++S+V EM+ M L + +
Sbjct: 392 MKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAK 451
Query: 256 RS 257
R+
Sbjct: 452 RT 453
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/150 (18%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP------------NLIMYN 105
++C PT + S L++L V + + MV L+ ++++YN
Sbjct: 101 DSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYN 160
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+ +L + D + + FD+M+ G PD++T++ + C + ++ F +M
Sbjct: 161 VTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGF 220
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+P + C+ + + + A+ +++
Sbjct: 221 GCEPDGITCSGMVYAYARTNNVDKAVNLYD 250
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 151 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPD 208
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 209 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LIPNGVTFTTLIDGHCKNGRVDFAMEI 266
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ PD +TYN + L K + + + EM +P T I
Sbjct: 267 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 326
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 327 EGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLS 377
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 117 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 174
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ +D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 175 VSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDE 234
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I +FA+EI+ +L +LP + N L+ GL G
Sbjct: 235 MLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 294
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 295 LKQAHDLIDEM 305
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L +L M+ G ++P++ Y+ ++ LC + +D+
Sbjct: 172 PSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASG--VLPDVYTYSVLINGLCKESKMDDAN 229
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + M+ P + T I L
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 350 VAYAALISGLCQEGRSV 366
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA + F +M E + AY T ++ + ++A K L ++ C P+
Sbjct: 162 KAGRLGEAEELFAQM--EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ L L K + L+++M + PN YN ++ +LC V+ +R
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLFEVMKK---DAEPNSSTYNIIIDMLCLGGRVEEAYRI 276
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M FP+ LT N++ + L K +K+ E F + P + + I L
Sbjct: 277 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEMLNR 235
+ + A ++ +L+ G A+ V +RN GR D + +E++ R
Sbjct: 337 KGQVDEAYRLFEKMLDAG---HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 28/284 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A K + ER V+++ + L L + ++VDEAL VMK ++
Sbjct: 194 GYGSAGRFEDAYKLLERLRER--GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDA 250
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D+L ++ D M +L PNL+ N +V LC ++
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEA 308
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ F+ G PD +TY + + L K +V E F +M+ P+ + I
Sbjct: 309 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 368
Query: 181 LLDADEPEFAIEIWNYILENGILP------------LEAS----ANVLLVGLRNLGRLSD 224
E +++ ++ G P +A ++ +R+ G L D
Sbjct: 369 FFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 428
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
VR ++ ILI+ +T + N +M+ + +L+ R
Sbjct: 429 VRSYS-------ILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 108/259 (41%), Gaps = 6/259 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M ++ F + AY + + +V +A + L MK +
Sbjct: 438 GLTKAGQARETSNIFHAMKQQGFALDAR---AYNAVVDGFCKSGKVHKAYEILEEMKEKC 494
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + +D L K++ L++ G L N+++Y++++ +D
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL--NVVLYSSLIDGFGKVGRIDE 552
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K ++++E F M + + P + I
Sbjct: 553 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILIN 612
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A W + + G++P + ++ GL +G ++D E +
Sbjct: 613 GLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIP 672
Query: 240 YDVTMQKLKKAFYNESRSM 258
+ L + N +R+M
Sbjct: 673 DAASFNALIEGMSNANRAM 691
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++ R ++ P AY + L ++ + AL+ LR M+ + F+ + L +
Sbjct: 35 VMRRLKFRPAFS-AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALARE 93
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ L D + G L P++++YN + +VD +FF ++ G PD +
Sbjct: 94 GQVADALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDV 151
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
+Y + L K ++ E E F +M P T I A E A ++ +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211
Query: 198 LENGILPLEASANVLLVGL 216
E G +P S N +L L
Sbjct: 212 RERGCIPSVVSFNSILTCL 230
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L+R +++D+A+ + VM+ P ++ + L + ++L M +G+ +
Sbjct: 19 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+L + +V L V + D++ PD + YN+ +C K V
Sbjct: 79 GVHL--FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACK 136
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
FFHE+ +P ++ + I +L A A E++ + +P + N +++G
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 196
Query: 218 NLGRLSDVRRFAEEMLNR 235
+ GR D + E + R
Sbjct: 197 SAGRFEDAYKLLERLRER 214
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 8/237 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITL-IRGKQVDEALKFLRVMKGE 58
G K+G V EA + F +M++ NP + Y + + I G++ D F +++
Sbjct: 333 GLGKKGQVDEAYRLFEKMLDAGHNANP---VVYTSLIRNFFIHGRKEDGHKVFKELIR-R 388
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P L + +D + K + +++ + GF +P++ Y+ ++ L
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQAR 446
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M G D+ YN + + K+ KVH+ EM + QPT +
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ GI + L+ G +GR+ + EEM+ +
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 563
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + + ++ P V++Y T + IR ++E K M P
Sbjct: 148 KEGDIRLAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L++ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFEEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEV 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K +++ + EM +P + T I
Sbjct: 264 YKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLS 374
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + K D ++D + G L P+++ YN ++ D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG--LRPSVVSYNTLMNGYIRLGD 186
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ F+ M G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + A+E++ +L +LP + N L+ GL G L+ +EM
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C D+ FD + G P ++YN + I+ ++E
Sbjct: 135 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLK 194
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M + QP + I L + + A E++ +L G++P + L+ G
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKN 254
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKL-----KKAFYNESRSMRD 260
GR+ ++ML++ +L +T L KK N++ + D
Sbjct: 255 GRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMD 300
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+ K +M++R + P+ V+A+ + ++ ++ EA + + M P +++
Sbjct: 300 DGAKLLRDMIKR-KITPD-VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D K N + D+MV G PN+ +N ++ C N +D+ F +M
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G D++TYN + + + K+ + F EM+ +P ++ + L D EPE
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 190 AIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDV 225
A+EI+ I E + L+ N+++ G+ N ++ D
Sbjct: 476 ALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 511
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 4/246 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A MVE + P V Y L + + Q A++ LR M+
Sbjct: 191 GKVSDAVLLIDRMVET-GFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S +D L K + L++ M GF ++I+Y ++ C D+ +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ PD + ++ + +C +K K+ E E EMI+ P + + I +
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ + A + + ++ G P + N+L+ G + D +M R ++ VT
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 246 KLKKAF 251
L + F
Sbjct: 427 TLIQGF 432
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 41/238 (17%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G++ A F EM ++ F+ + ++ Y T + + D+ K LR M
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKAD---IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + FS +D VK +L M+ G + P+ + Y +++ C N +D
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDK 370
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D MV G P+ T+N++ K + +
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD------------------------- 405
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+E++ + G++ + N L+ G LG+L + +EM++RR+
Sbjct: 406 ----------GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A G+++ + + P+ V + T + L +V EAL+ + M PTL +
Sbjct: 126 AFSAMGKII-KLGYEPDTV-TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L + V L D MV GF PN + Y V+ ++C + +M
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQ--PNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
D++ Y++I + L K+ + N F+EM ++ + T I A +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
++ +++ I P + + L+ G+L + +EM+ R I VT L
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 251 FYNESR 256
F E++
Sbjct: 362 FCKENQ 367
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN ++ +CN + VD+ + F + G PD TYN++ L K + E + F +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ P I L + + ++ I G ++AS ++V + + GRL
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG-FSVDASTVKMVVDMLSDGRL 612
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P LI ++ + ++ D V QM G + T +++ C + +K+ +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++IK ++P + +T I L A+E+ + ++E G P + N L+ GL
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 219 LGRLSDVRRFAEEML 233
G++SD + M+
Sbjct: 190 NGKVSDAVLLIDRMV 204
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 92/242 (38%), Gaps = 4/242 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F M R H A L L R + A + M T ++
Sbjct: 126 DAVRVFDHMRARGLAPDAH--ACTALLTALARARMTATARRVFDEMARAGLAATTHVYNA 183
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L + +K D+ + M G L + YN V+ L C D+M
Sbjct: 184 MLHVCLKAGDAAQAEAIVTRMDAAGVTL--DRFSYNTVIALYCRKGMGYEAMCARDRMDK 241
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD++T+N L K +V E F EM+ + P + T I A E
Sbjct: 242 EGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEE 301
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A+++ + G+LP A+ N +L L G + +V R EM R++ VT L
Sbjct: 302 AVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLIN 361
Query: 250 AF 251
A+
Sbjct: 362 AY 363
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 16/205 (7%)
Query: 4 KEGNVVEANK------TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
K G+ +A G ++RF +N T + R EA+ M
Sbjct: 190 KAGDAAQAEAIVTRMDAAGVTLDRFSYN--------TVIALYCRKGMGYEAMCARDRMDK 241
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
E P +++++ L K QL+ MV P+ + Y ++ C +V
Sbjct: 242 EGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAA--QATPDNVTYTTLIDGYCRAGNV 299
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ + +M G P TYN I L ++ + EV HEM + Q + C T
Sbjct: 300 EEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTL 359
Query: 178 ITMLLDADEPEFAIEIWNYILENGI 202
I + A ++ ++E+G+
Sbjct: 360 INAYCKRGDMTSACKVKKKMMESGL 384
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V EA + F EMV + P++V Y T + R V+EA+K M+
Sbjct: 257 GLCKEGRVKEAAQLFTEMVA-AQATPDNV-TYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + NA IL KL + + ++ ++ + G + + + N ++ C D+ +
Sbjct: 315 LPGVATY-NA--ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTS 371
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ G + TY + K +++ + F +M+ + P + +
Sbjct: 372 ACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPN----YSVFS 427
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+D + + + I + +++ G+ P +A L+ L G + +R ++M ++
Sbjct: 428 WLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSK 487
Query: 236 RIL 238
++
Sbjct: 488 GLV 490
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV GF+ PN +++ +V C N+ D V D+++ G PD Y + L +
Sbjct: 414 MVDAGFS--PNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRK 471
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
V + + F +M L AT L P A+ + + +N
Sbjct: 472 GLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN 522
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KEGDIRVAQLVF-NAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANGLFDEMLDKG--LVPNGVTFTTLIAGHCKNRRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 374
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + KN++V + +M+ P + T I L
Sbjct: 227 GLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 346
Query: 242 VTMQKLKKAFYNESR 256
V L E R
Sbjct: 347 VAYTALISGLCQEGR 361
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+V A F +M E + P+ V+ Y + + L + +A LR M P
Sbjct: 189 KNGHVNYALSLFDQM-ENYGIRPD-VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D VK +L++ M I ++ PN+ Y +++ C VD +
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M G FPD + Y + K KKV + F+EM + + T I
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+P A E++++++ G+ P + NVLL L G++ E+M R +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 92/234 (39%), Gaps = 36/234 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG ++A + + EM+ R P ++ Y + + VDEA + +M+ + CFP
Sbjct: 259 KEGKFLDAEELYNEMI-RMSIAP-NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ ++ K ++++ M G L N I Y ++ +
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKG--LTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F MV G P+ TYN++ CL N KV + F +M K E +D
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE---------------MD 419
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P IW Y NVLL GL G+L E+M R +
Sbjct: 420 GVAP----NIWTY-------------NVLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F++ ++ N + + + MV +G + P+++MY ++ LC N V+
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG--IKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FDQM +G PD + Y + L + + + ++ M K + +P + L
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI----TFNAL 253
Query: 182 LDA--DEPEF--AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
+DA E +F A E++N ++ I P + L+ G G + + R+
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 2/166 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ +GF P+++ + +++ C N ++ +QMV G PD + Y I + L KN
Sbjct: 133 MMKLGFE--PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V+ + F +M +P + + + L ++ A + + + I P +
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N L+ G+ D EM+ I T L F E
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+++A + F EM + ++++ + L + +D+ALK+ R MK P
Sbjct: 374 NMMDAERIFDEMPS--QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ + + + +++ D M+ G L +++ YN ++ LC + F +
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVL--DVVTYNTILNGLCKEKMLSEADELFTE 489
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G FPD T+ + K+ +++ F MI+ +P + T I E
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
E E+WN ++ I P S +L+ G N+G +S+ R +EM+ + +T
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 247 LKKAFYNESRSMR-DRFDS 264
+ K + +++ D F S
Sbjct: 610 IVKGYCRAGNAVKADEFLS 628
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA K EM+E + V+ Y T L L + K + EA + M
Sbjct: 438 GFCRNGVMSEALKVRDEMLE--QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP F+ ++ K + V L+++M I NL P+++ YN ++ C ++++ V
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ M+ +P+ ++Y ++ V E + EM++ ++ T + C T +
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
A A E + +L GI+P + N L+ G
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 648
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVD----EALKFLRVMK 56
G KE + EA++ F EM ER + P+ + TF TLI G D +A+ +M
Sbjct: 473 GLCKEKMLSEADELFTEMTERGVF-PD----FYTF-TTLINGYSKDGNMNKAVTLFEMMI 526
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + ++ +D K ++ +LW+ M I + PN I Y ++ CN
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGC 584
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V FR +D+MV G +T N I + + + + F M+ P + T
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I + + + A + N + +G+LP + NV+L G GR+ + +M+ R
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 237 I----------LIYDVTMQKLKKAF 251
+ + VT LK+AF
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAF 729
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L + ++++ FL M+ + FP + ++ ++ + +L D M G G L
Sbjct: 263 ALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG--L 320
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P + YNA++ LC D+M+ G PD+ TYN++ +N + + E
Sbjct: 321 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 380
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM P ++ + I +L + A++ + + G+ P +L+ G
Sbjct: 381 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFC 440
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
G +S+ + +EML + ++ VT + E
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GN+ +A F M++R P+ V+ Y T + +G ++++ + M
Sbjct: 508 GYSKDGNMNKAVTLFEMMIQR-NLKPD-VVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ + + +LWD MV GF +I N +V C +
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE--ATIITCNTIVKGYCRAGNAVKA 623
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G PD +TYN + IK + + ++M + P + +
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 683
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A I ++E G+ P ++ L+ G L + R +EML R
Sbjct: 684 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L ++ + T ++ +++ E + RV+K + ++ ++ L LVK+ +++
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+V G + N+ N ++ LC N ++N F M G FPD +TYN + +
Sbjct: 245 VVRSGVQV--NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ E M +P I L + A + + +L+ G+ P A+
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N+LLV + D R +EM ++ ++
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVV 391
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 4/252 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G + +A K F +M + P++V+ Y + R + EALK M + C
Sbjct: 405 SKNGCLDQALKYFRDM-KNAGLAPDNVI-YTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ L+ L K + +L+ M G + P+ + ++ + +++
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERG--VFPDFYTFTTLINGYSKDGNMNKAVT 520
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+ M+ PD +TYN + + K ++ +V +++MI P ++ I
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ A +W+ ++E G + N ++ G G F ML + I+ +
Sbjct: 581 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640
Query: 243 TMQKLKKAFYNE 254
T L F E
Sbjct: 641 TYNTLINGFIKE 652
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 4/272 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G+ EA++ F M + AY + L +L RG + EA++ L + +
Sbjct: 422 SKLGHSSEAHRLFCNMWSFHDGGDRD--AYISMLESLCRGGKTVEAIELLSKVHEKGIST 479
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ L L KL +H L++ M G P++ YN ++ L V
Sbjct: 480 DTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG--PFPDIFTYNILISSLGRVGKVKEAVE 537
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F+++ PD ++YN + CL KN V E F EM P + +T I
Sbjct: 538 VFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFG 597
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
D+ E A +++ ++ G P + N+LL L GR ++ ++ + + +
Sbjct: 598 KTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSI 657
Query: 243 TMQKLKKAFYNESRSMRDRFDSLERRWKTSQM 274
T L + +R R R + W S +
Sbjct: 658 TYAILDRLQSGSNRKFRVRRQNPITGWVVSPL 689
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ AY L L + +Q+D + K + MK ++C P ++ + + K+ + ++ L++
Sbjct: 274 IFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFE 333
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G PNLI YN ++ L + VD F M+ + P+ TY++I L+
Sbjct: 334 EMLTKGCT--PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVA 391
Query: 149 NKK------VHEVENFF 159
+ V EV N F
Sbjct: 392 EGQLGRLDEVLEVSNKF 408
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
++ DS ++ M G+ L ++ YN ++ L + +D ++ F M P
Sbjct: 250 IRSRDSDRAFNVYMEMWSKGYQL--DIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 307
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D TY ++ K + E F EM+ P + T I L + + AI ++
Sbjct: 308 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 367
Query: 195 NYILENGILPLEASANVL---LVGLRNLGRLSDVRRFAEEMLNRRILIYDV-TMQKL 247
+++N P E + +++ LV LGRL +V + + +N+ I Y V T+ KL
Sbjct: 368 CNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKL 424
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA + F +M E + AY T ++ + ++A K L ++ C P+
Sbjct: 296 KAGRLGEAEELFAQM--EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 353
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ L L K + L+++M + PN YN ++ +LC V+ +R
Sbjct: 354 VVSFNSILTCLGKKRKVDEALSLFEVMKK---DAEPNSSTYNIIIDMLCLGGRVEEAYRI 410
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M FP+ LT N++ + L K +K+ E F + P + + I L
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEMLNR 235
+ + A ++ +L+ G A+ V +RN GR D + +E++ R
Sbjct: 471 KGQVDEAYRLFEKMLDAG---HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 28/284 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G +A K + ER V+++ + L L + ++VDEAL VMK ++
Sbjct: 328 GYGSAGRFEDAYKLLERLRER--GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDA 384
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D+L ++ D M +L PNL+ N +V LC ++
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEA 442
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ F+ G PD +TY + + L K +V E F +M+ P+ + I
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 502
Query: 181 LLDADEPEFAIEIWNYILENGILP------------LEAS----ANVLLVGLRNLGRLSD 224
E +I+ ++ G P +A ++ +R+ G L D
Sbjct: 503 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 562
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERR 268
VR ++ ILI+ +T + N +M+ + +L+ R
Sbjct: 563 VRSYS-------ILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 108/259 (41%), Gaps = 6/259 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M ++ F + AY + + +V +A + L MK +
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDAR---AYNAVVDGFCKSGKVHKAYEILEEMKEKC 628
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + +D L K++ L++ G L N+++Y++++ +D
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL--NVVLYSSLIDGFGKVGRIDE 686
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K ++++E F M + + P + I
Sbjct: 687 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILIN 746
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A W + + G++P + ++ GL +G ++D E +
Sbjct: 747 GLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIP 806
Query: 240 YDVTMQKLKKAFYNESRSM 258
+ L + N +R+M
Sbjct: 807 DAASFNALIEGMSNANRAM 825
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 3/199 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++ R ++ P AY + L ++ + AL+ LR M+ + F+ + L +
Sbjct: 169 VMRRLKFRPAFS-AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALARE 227
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ L D + G L P++++YN + +VD ++FF ++ G PD +
Sbjct: 228 GQVADALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
+Y + L K ++ E E F +M P T I A E A ++ +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345
Query: 198 LENGILPLEASANVLLVGL 216
E G +P S N +L L
Sbjct: 346 RERGCIPSVVSFNSILTCL 364
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL 97
L+R +++D+A+ + VM+ P ++ + L + ++L M +G+ +
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+ ++ +V L V + D++ PD + YN+ +C K V
Sbjct: 213 --GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWK 270
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
FFHE+ +P ++ + I +L A A E++ + +P + N +++G
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 330
Query: 218 NLGRLSDVRRFAEEMLNR 235
+ GR D + E + R
Sbjct: 331 SAGRFEDAYKLLERLRER 348
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM E+ P V Y + L + ++DEA K +
Sbjct: 607 GFCKSGKVHKAYEILEEMKEKC-VQPT-VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 664
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + M+ G L PN+ +N+++ L +++
Sbjct: 665 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG--LTPNVYTWNSLLDALVKAEEINEA 722
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P++ TY+++ L + +K ++ F+ +M K P + T I+
Sbjct: 723 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 782
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
L A ++ NG +P AS N L+ G+ N R + + EE
Sbjct: 783 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEE 833
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G V EA + F +M++ NP + Y + + + ++ K + +
Sbjct: 467 GLGKKGQVDEAYRLFEKMLDAGHNANP---VVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P L + +D + K + +++ + GF +P++ Y+ ++ L
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQARE 581
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F M G D+ YN + + K+ KVH+ EM + QPT +
Sbjct: 582 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 641
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ GI + L+ G +GR+ + EEM+ +
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 697
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + V++A+ + M C P K + + L ++ +++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + GF+L +L+ YN ++GL C+ N+ + V+ M G PDS+TYN +
Sbjct: 535 EKLKEGGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI-LENGILPLE 206
K+K VE +M ++ PT I E + A++++ + L + + P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
N+L+ LG EEM
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGE-----NCFPTLKF-FSNALDILVKLNDSTHTVQLWDIMV 91
TL + ++VDEAL+ M+G+ N F+ +D L K+ +L + +
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRM 396
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ +PN + YN ++ C ++ +M P+ +T N I + ++
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ FF +M K + + T I E A+ + +LE G P
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ GL + R D R E++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKL 537
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/136 (17%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + + K + + + M+ + PT+ + +D + + ++L+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G+ + PN ++YN ++ + ++M P+ TYN +F+CL +
Sbjct: 642 M-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 150 KKVHEVENFFHEMIKN 165
+ + EM+++
Sbjct: 701 TQGETLLKLMDEMVEH 716
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + G + EA K F +M + +V Y + L R Q+ A M C
Sbjct: 264 GWCRAGEISEAEKVFKDM--KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+N + + VK +Q+++ M +G P+ I YN ++ C + +++N
Sbjct: 322 APNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCE--PDTITYNFLIETHCRDENLENA 379
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M+ ++ T+N IF + K + V+ + +M++ + +P + + M
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
+ + +++ + + + P + +L+ +G ++ + +EM+ + L
Sbjct: 440 FAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 239 ---IYDVTMQKLKKA 250
+Y++ + +L++A
Sbjct: 500 SLSLYEMVLAQLRRA 514
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 30 LAYETFLITL---IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++ ETF I + +R EA+ M+ C P FS + L + ++
Sbjct: 184 ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSF 243
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D + P++I+Y +V C ++ + F M G P+ TY+++ + L
Sbjct: 244 FD---SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDAL 300
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ ++ + F +M+ + P + + + + A PE ++++N + + G P
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDT 360
Query: 207 ASANVLL 213
+ N L+
Sbjct: 361 ITYNFLI 367
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G EA F M E + P+ + A+ + L R ++ EA F +K +
Sbjct: 196 YVRAGLASEAVHCFNRM-EDYGCVPDQI-AFSIVISNLSRKRRASEAQSFFDSLK-DRFE 252
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++N + + + + +++ M G PN+ Y+ V+ LC +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIE--PNVYTYSIVIDALCRCGQISRAH 310
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M+ G P+++T+N + +K + +V +++M K +P
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEP 358
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 12/244 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA + FG+M E AY T ++ Q + A K L +K C P+
Sbjct: 299 KAGRLSEAEELFGQM--ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPS 356
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ L L K + L++ M + PN YN ++ +LC V+ +
Sbjct: 357 VVSFNSILTCLGKKRKVDEALTLFEAMKK---DAEPNSSTYNIIIDMLCMAGKVEEAYMI 413
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M G FP+ LT N++ + L K KK F + P + + I L
Sbjct: 414 RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGK 473
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEMLNRRILIY 240
+ A ++ +L+ G A+ V +RN GR D + +EM NRR
Sbjct: 474 KGNVDDAYRLFENMLDTG---HNANPVVYTSLIRNFFMHGRKEDGHKIFKEM-NRRGCQP 529
Query: 241 DVTM 244
D+T+
Sbjct: 530 DLTL 533
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M ++ F + AY + + ++D+A + L MK +
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDAR---AYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + + +D L K++ L++ G L N+I+Y++++ +D
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL--NVIVYSSLIDGFGKVGRIDE 689
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K ++++E F M + + P + I
Sbjct: 690 AYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 749
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + A W + + G++P + ++ GL +G ++D
Sbjct: 750 GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDA 795
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + M R ++ P AY + + +Q + AL+ LR M+ + F+
Sbjct: 165 DAERVIAAM-RRLKFRPAFS-AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTT 222
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + + L D + G L P++++YN + +VD ++FF ++
Sbjct: 223 LVRALAREGRVEGALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS 280
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD ++Y + L K ++ E E F +M P T I A + E
Sbjct: 281 QGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFEN 340
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A ++ + + E G +P S N +L L ++ + E M
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 5/231 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GNV A K F E+ + P+ V +Y + + L + ++ EA + M+ E P
Sbjct: 264 KAGNVDMAWKFFHELKSQ-GLKPDDV-SYTSMIWVLCKAGRLSEAEELFGQMETERAVPC 321
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + +L D + G +P+++ +N+++ L VD
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERG--CIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+ M A P+S TYN+I + L KV E EM P L + L
Sbjct: 380 FEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A + E A E++ + G P + L+ GL G + D R E ML+
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + +A + EM + + P V Y + + L + ++DEA K +
Sbjct: 610 GFCKSGKLDKAYEVLEEM--KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGI 667
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + M+ G L PN+ +N+++ L +++
Sbjct: 668 ELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG--LTPNVYTWNSLMDALVKAEEINEA 725
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P++ TY+++ L + +K ++ F+ EM K P + T I
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
L A ++ NG P AS N L+ G+ + R + EE
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A + L+R +++D+A + + M+ P ++ + + + ++L M
Sbjct: 149 ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM 208
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G+ + + ++ +V L V+ D++ PD + YN+ +C K
Sbjct: 209 QEVGYEV--GVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 266
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V FFHE+ +P ++ + I +L A A E++ + +P + N
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
+++G + G+ + + +++ R
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKER 351
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 5/218 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V EA F M + E N Y + L +V+EA M+ FP
Sbjct: 369 KKRKVDEALTLFEAMKKDAEPNSS---TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L + +D L K ++++ G N PN + Y +++ L +VD+ +R
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFETASQRGCN--PNSVTYCSLIDGLGKKGNVDDAYRL 483
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+ M+ G + + Y + + + + F EM + QP T + +
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
A + E I+ I G LP S ++L+ GL G+
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + K+ + A + C P + + +D L K + +L++ M+ G N
Sbjct: 436 LCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNAN 495
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++Y +++ + ++ + F +M G PD N +C+ K V +
Sbjct: 496 P--VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLR 217
F ++ + P + + I L A + I++ + + G L+A A N ++ G
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG-FALDARAYNAVVDGFC 612
Query: 218 NLGRLSDVRRFAEEMLNRRI 237
G+L EEM +R+
Sbjct: 613 KSGKLDKAYEVLEEMKVKRV 632
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 62/158 (39%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L + N + + DV+ F+ + +G PD +Y+++ L K + E +
Sbjct: 529 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSI 588
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
FH M + + + + + + A E+ + + P A+ ++ GL
Sbjct: 589 FHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAK 648
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ RL + EE ++ I + + L F R
Sbjct: 649 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 15/271 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA F EMV + NP++ + + L + + A L VM E
Sbjct: 252 GFCIVGQLEEAFGLFREMVLK-NINPDY-YTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D +N + + + +G PN Y ++ C VD
Sbjct: 310 MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG--AAPNAHSYCTMINGFCKIKMVDEA 367
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL---NCATA 177
F+ M F G PD +TYN + + L K+ ++ EM N QP + NC
Sbjct: 368 LSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN-GQPANIFTYNC--L 424
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I L + AI + I + GI P + N+L+ GL +GRL + + +++L++
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Query: 238 LI----YDVTMQKL-KKAFYNESRSMRDRFD 263
+ Y++ + L K+ ++E+ ++ + D
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALLSKMD 515
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 100/250 (40%), Gaps = 12/250 (4%)
Query: 16 GEMVERFEWNPEHVLA---------YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
G++ E ++ +HVLA Y T + L + + AL+ LR + G+ +
Sbjct: 152 GKVKEALHFH-DHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVM 210
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ +D L K +L+ M I + P+++ ++A++ C ++ F F +
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQM--IAKKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV PD T+N++ + L K + +N M+K P + ++ + ++
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A + N I + G P S ++ G + + + +M + I VT
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388
Query: 247 LKKAFYNESR 256
L R
Sbjct: 389 LIDGLCKSGR 398
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + +L + K V +A + M + P + FS + + L+
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE--CL 146
MV N P+ +N +V LC ++ M+ G P+ +TY+ + + CL
Sbjct: 268 EMVLKNIN--PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL 325
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ +V++ ++ + + + P + T I + A+ ++N + GI P +
Sbjct: 326 V--NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ GL GR+S +EM
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEM 409
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 100 NLIMYNAVVGLL--CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
++I +N ++G L NNN ++ FHG PD T+N++ C +++ +
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+++K ++P + T I L + + A+ +++L G + S L+ GL
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 218 NLGR----LSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+G L +R+ +++ +++Y+ + L K
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 69/196 (35%), Gaps = 39/196 (19%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y T + + K VDEAL M+ + P +++ +D L K S W+++
Sbjct: 350 SYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK---SGRISYAWELV 406
Query: 91 VGIGFNLMP-NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD-------------- 135
+ N P N+ YN ++ LC N+ VD ++ G PD
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466
Query: 136 ---------------------SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ TYN++ L K E E +M N P +
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526
Query: 175 ATAITMLLDADEPEFA 190
T I L DE E A
Sbjct: 527 ETLIQALFHKDENEKA 542
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 6/268 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ AN M + P +V+ Y T L L ++ +EA L M E+C
Sbjct: 292 GICKDGHHEVANDILSRM-PSYGLKP-NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G +P++I Y V+ C VD
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG--CIPDVITYTTVINGFCKEGLVDEA 407
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L + ++ + + MI+ P P+ T I
Sbjct: 408 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 467
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 468 MCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 527
Query: 241 DVTMQKLKKAFYNESRSMR--DRFDSLE 266
+ + A E R+ + FDS++
Sbjct: 528 TIIYSSMASALSREGRTDKIIQMFDSIQ 555
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 42/265 (15%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N ++E E EH V+ Y T + + VDEA+ L+ M C P
Sbjct: 366 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 425
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + +L M+ G +PN + +N ++ +C V+ Q
Sbjct: 426 YTIVLKGLCRAERWVDAQELISHMIQQG--CLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL---NCATAI----- 178
M+ +G PD ++Y+ + + L K K E + MI P + + A+A+
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543
Query: 179 --------------TMLLDAD-------------EPEFAIEIWNYILENGILPLEASANV 211
T+ DA E + AI+ + Y++ NG +P E++ +
Sbjct: 544 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 603
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRR 236
L+ GL + G + + + E+ +RR
Sbjct: 604 LIRGLASEGLVREAQDLLSELCSRR 628
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F P+++ YNAV+ LC D+V +MV G P+ T+N + L +N +
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQ 266
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
V +M ++ P AT I + E A +I + + G+ P N +L
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
GL + R + EM + DVT
Sbjct: 327 GLCSAERWEEAEDLLAEMFQEDCPLDDVT 355
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
VDE ++ LR + C P + ++ L L +L MV +G PN+ +
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCP--PNVATF 251
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
N ++ LC N + V QM HG PD Y I + + K+ HEV N
Sbjct: 252 NTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH-HEVAN 303
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K+G V+EA F MVE+ Y + L++ +V++A + M+G+
Sbjct: 570 YCKKGKVIEACSAFRSMVEQGILGDAKT--YTVLMNGLVKNGKVNDAEEIFHEMRGKGIA 627
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + +D KL + ++D MV G L N+I+YN ++G C + +++
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG--LTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+++TY I + K+ + E F EM P T +
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ E AI I+ E G A N L+ + G+ +M+NR
Sbjct: 746 CRLNDVERAITIFE-TNEKGCASSSAPFNALINWVFKFGK----TELTTDMINR 794
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 9/227 (3%)
Query: 15 FGEMVERFEWNPEHVLAYETF-----LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
FG+ V + E +A +TF +I L + K++DEA FL M EN F F
Sbjct: 471 FGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV-ENGFKPDAFTYG 529
Query: 70 A-LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
A + ++ + + M+ G ++PN ++ ++ C V F MV
Sbjct: 530 AFISGYIEAGEFASADKYVKEMLECG--VIPNKVLCTGLINEYCKKGKVIEACSAFRSMV 587
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G D+ TY ++ L+KN KV++ E FHEM P + T I +
Sbjct: 588 EQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQ 647
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A I++ +++ G+ N+LL G G + + +EM +
Sbjct: 648 KASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG + +A F M+ F P AY + + R K V + + L +K N
Sbjct: 361 SKEGAMEKAKALFDGMIT-FGVTP-GARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ + A+ + D + M G PN+++Y ++ + + R
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCR--PNVVIYTTLIKTFLQKSRFGDAVR 476
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+M G PD+ YN + L K KK+ E +F EM++N ++P I+ +
Sbjct: 477 VLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYI 536
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+A E A + +LE G++P VL GL N
Sbjct: 537 EAGEFASADKYVKEMLECGVIP----NKVLCTGLIN 568
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 9/263 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ +A+ F EMV+ +V+ Y L R ++++A + L M G+
Sbjct: 639 GFSKLGNMQKASSIFDEMVQ--AGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K D QL+D M G L+P+ +Y +V C NDV+
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG--LVPDSFVYTTLVDGCCRLNDVERA 754
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW----QPTPLNCAT 176
F+ G S +N + + K K + + ++ + +P +
Sbjct: 755 ITIFETNE-KGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L E A E+++++ + ++P + LL G +GR S++ +E++
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873
Query: 237 ILIYDVTMQKLKKAFYNESRSMR 259
I ++ + AF E + +
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTK 896
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 2/206 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + + +D A ++ M C P + ++ + ++ + V++ M
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G + P+ YN+++ L +D F +MV +G PD+ TY I+ +
Sbjct: 483 EQG--IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + EM++ P + C I + A + ++E GIL + V
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ GL G+++D EM + I
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGI 626
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 7/232 (3%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L + K++++A L M F +S +D L+K ++ L M
Sbjct: 282 SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEM 341
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V GF++ P +MY+ + ++ ++ FD M+ G P + Y + E + K
Sbjct: 342 VSHGFSIDP--MMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREK 399
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V + E+ K +P TA+ + + + + A I + +G P
Sbjct: 400 NVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYT 459
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA-FYNESRS 257
L+ R D R +EM + I Y+ + L KA +E+RS
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P+ YN ++ LC +++ +M G F D++ Y+++ + L+K +
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
HEM+ + + P+ I ++ E A +++ ++ G+ P + L+ G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 216 LRNLGRLSDVRRFAE---EMLNRRILIYDVT 243
R +VR+ E E+ R I+I T
Sbjct: 395 FF---REKNVRKGYELLVEIKKRNIVISPYT 422
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ EA + F EM + + Y T + R V+ A+ + + C
Sbjct: 709 GYCKSGDLAEAFQLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE-KGC 765
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM--PNLIMYNAVVGLLCNNNDVD 118
+ F+ ++ + K + T + + ++ F+ PN + YN ++ LC +++
Sbjct: 766 ASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLE 825
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M P +TY + K + E+ + F E+I +P + + I
Sbjct: 826 AAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVII 885
Query: 179 TMLLDADEPEFAIEIWNYI-----LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A+ + + + +++G ++ LL G +G + + E M+
Sbjct: 886 NAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 7/231 (3%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+ P+ V + T + L ++ EA++ M G + P F+ +D+L K
Sbjct: 149 KLGIQPDSV-TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMV 207
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ +++ M G PN+ YNA++ C ++++ + F+ MV G P +Y+
Sbjct: 208 SEARCVFETMTEKGVE--PNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYS 265
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
++ K++++ E + +M + E P + T + L A A E++ + +
Sbjct: 266 ILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS 325
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKL 247
G+LP + ++LL GL G L + + M R+ I++Y++ +Q +
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K+G V EA F M E+ E N + Y + ++++A K +M G+ C P
Sbjct: 203 KKGMVSEARCVFETMTEKGVEPN---IYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAP 259
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +S ++ K L M L+PN + YN ++ LC+ + +
Sbjct: 260 SVHSYSILINGYCKSRRIDEAKALLTQMSEK--ELIPNTVTYNTLMQGLCHASSLLEAQE 317
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F +M G P+ TY+++ + L K+ + E M + + +P + I +
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMF 377
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
A + E A E+++ + NGI P + N+++ GL G LSD
Sbjct: 378 IAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEG-LSD 418
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A+K F MV + H +Y + + +++DEA L M + P ++
Sbjct: 244 DASKVFEIMVGKGCAPSVH--SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + +L+ M G ++PNL Y+ ++ LC + ++ + M
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSG--MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PD + YN++ + + K+ + F ++ N +P+ I LL +
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
A +++ + ++G LP S NV++ G S + +EM+ RR
Sbjct: 420 AYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L +L+ V + M +G + P+ + + ++ LCN + F++M
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLG--IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
A P+++T+ ++ + L K V E F M + +P + E A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+++ ++ G P S ++L+ G R+ + + +M + ++ VT L +
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 251 FYNES 255
+ S
Sbjct: 306 LCHAS 310
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 57/145 (39%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
I N P+ + +G + V +QM G + T N++ L + +
Sbjct: 78 IHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHI 137
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
H + +M K QP + T I L + + A+E++N + +P + +L
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTIL 197
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L G +S+ R E M + +
Sbjct: 198 VDVLCKKGMVSEARCVFETMTEKGV 222
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ EA K M ER + P+ VL Y + + +++ A + +
Sbjct: 340 GLCKHGHLEEALKLLTSMQER-KLEPDIVL-YNILIQGMFIAGKLEVAKELFSKLFANGI 397
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+++ ++ + L+K S +L+ M GF +P+ YN ++ N D
Sbjct: 398 RPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF--LPDSCSYNVIIQGFLQNQDPSTA 455
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE 144
+ D+MV DS T+ M+ +
Sbjct: 456 IQLIDEMVGRRFSADSSTFKMLLD 479
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 7/231 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P+ V++Y T + R ++D+ K + VMK + P + + + +L ++
Sbjct: 277 YTPD-VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ + M+ G ++P+ ++Y ++ C D+ +FF +M PD LTY I
Sbjct: 336 EEAFSEMIRQG--ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ + E FHEM +P + I A + A + N++++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
P + L+ GL G L EM L I Y+ + L K+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A+K F EM R + P+ VL Y + + + EA K M +
Sbjct: 360 GFCKRGDIRAASKFFYEMHSR-DITPD-VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ ++ K ++ + M+ G + PN++ Y ++ LC D+D+
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSA 475
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
+M G P+ TYN I L K+ + E E++ LN T T
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV-----GEFEAAGLNADTVTYT 530
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+DA E + A EI +L G+ P + NVL+ G G L D + ML +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 236 RILIYDVTMQKLKKAF 251
I T L K +
Sbjct: 591 GIAPNATTFNSLVKQY 606
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 5/211 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
WN V +Y + + + ++ EA L +M+ + P + +S ++ + +
Sbjct: 244 WN---VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L ++M G L PN +Y +++GLLC + F +M+ G PD++ Y +
Sbjct: 301 WKLIEVMKRKG--LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ K + FF+EM + P L I+ + A ++++ + G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
P + L+ G G + D R M+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I Y+ VV C ++D V++ + M G P+S Y I L + K+ E E
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EMI+ P + T I + A + + + I P + ++ G
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+G + + + EM + + VT +L Y ++ M+D F
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELING-YCKAGHMKDAF 441
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA K GE E N + V Y T + + ++D+A + L+ M G+
Sbjct: 500 GLCKSGNIEEAVKLVGEF-EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ F+ N + L D + W + GI PN +N++V C N++
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIA----PNATTFNSLVKQYCIRNNL 612
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ M G PD TY + + K + + E F EM
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 5/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
W N+VEA + + EM+E P+ V+ + T + L+RG++ EA+K +MK +
Sbjct: 79 AWCNARNLVEAGRVWNEMLEN-GLKPD-VVVHNTMIEGLLRGQRRPEAVKMFELMKAKGP 136
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ ++ M +G P++ Y ++ N +D V
Sbjct: 137 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVG--CQPDVATYTCLLVGYGNAKRMDRV 194
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
++M G PD TYN + + L + + +MIK +PT + +
Sbjct: 195 TALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 254
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L +W + GI P S V + G GR + ++ EEM+ + +
Sbjct: 255 YFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKT 314
Query: 240 YDVTMQKLKKAFYNESR 256
+ K F +
Sbjct: 315 PQIDYNKFAADFSKAGK 331
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG EAN+ F M +R+ + + +Y ++ + + EA + M P
Sbjct: 48 QEGLGREANQVFDRMRDRYAPD---LRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPD 104
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ L++ V+++++M G PN+ Y ++ C +D R
Sbjct: 105 VVVHNTMIEGLLRGQRRPEAVKMFELMKAKG--PAPNVWTYTMLIRDHCKRGKMDMAMRC 162
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M G PD TY + K++ V EM + P I +L +
Sbjct: 163 FEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTN 222
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLL----VGLRN 218
+ P+ A I+ +++ G+ P + N+++ +G RN
Sbjct: 223 RNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRN 261
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G+V A F +M E + P+ V+ Y + + L + +A LR M P
Sbjct: 188 KNGHVDNALSLFNQM-ENYGIRPD-VVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D VK +L++ M I ++ PN+ Y +++ LC +D +
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEM--IQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M G FPD + Y + K KKV + F+EM + + T I
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+P A E++ +++ G+ P + NVLL L G+++ E+M R I
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ KEG +++A + + EM++ P ++ Y + + L ++DEA + +M+ + C
Sbjct: 255 AFVKEGKLLDAKELYNEMIQ-MSIAP-NIFTYTSLINGLCMEGRLDEARQMFYLMETKGC 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV---GLLCNNNDV 117
FP + +++ ++ K ++++ M G L N I Y ++ GL+ N
Sbjct: 313 FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG--LTGNTITYTTLIQGFGLVGKPNVA 370
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
VF MV G P+ TYN++ CL N KV++ F +M K E P N T
Sbjct: 371 QEVF---GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT 426
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 107/244 (43%), Gaps = 10/244 (4%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ G+++ + + P+ + + + + G +++EA+ + M P + ++
Sbjct: 125 ASSFLGKLM-KLGFEPD-IFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTI 182
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN---DVDNVFRFFDQM 127
+D L K + + L++ M G + P+++MY ++V LCN+ D D + R M
Sbjct: 183 IDSLCKNGHVDNALSLFNQMENYG--IRPDVVMYTSLVNGLCNSGRWRDADLLLR---GM 237
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ PD +T+N + + +K K+ + + ++EMI+ P + I L
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ A +++ + G P + L+ G ++ D + EM + + +T L
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357
Query: 248 KKAF 251
+ F
Sbjct: 358 IQGF 361
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRAVSVLNGMIKSGCKPNVHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHRVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 35/154 (22%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS--------------------------- 136
Y+A++ LC ++D + M+ G P+
Sbjct: 132 YSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 137 --------LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+TYN + L KNK E N E++ P + + + L E
Sbjct: 192 TMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A+ +WN + G P N+L+ GL ++G++
Sbjct: 252 RALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + V++A+ + M C P K + + L ++ +++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + GF+L +L+ YN ++GL C+ N+ + V+ M G PDS+TYN +
Sbjct: 535 EKLKEGGFSL--DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI-LENGILPLE 206
K+K VE +M ++ PT I E + A++++ + L + + P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
N+L+ LG EEM
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + + K + + + M+ + PT+ + +D + + ++L+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G+ + PN ++YN ++ + ++M P+ TYN +F+CL +
Sbjct: 642 M-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
+ + EM++ +P + + L +DE
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDE 737
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 7/201 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGE-----NCFPTLKF-FSNALDILVKLNDSTHTVQLWDIMV 91
TL + ++VDEAL+ M+G+ N F+ +D L K+ +L + +
Sbjct: 338 TLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRM 396
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ PN + YN ++ C ++ +M P+ +T N I + ++
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ FF +M K + + T I E A+ + +LE G P
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ GL + R D R E++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKL 537
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M + P L F+ +D VK +L+
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 315
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + P++ YN++V C ++ +D + F+ MV FPD +TYN + +
Sbjct: 316 DDMIKRSID--PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K+V + F EM + T I L + + A +++ ++ +G+ P
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL GL N G+L + M + I IY ++ + KA
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 480
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG VEA K + +M++R +P+ + Y + + ++D+A + M ++CFP
Sbjct: 304 KEGKFVEAEKLYDDMIKR-SIDPD-IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K +L+ M G L+ + + Y ++ L ++ D DN +
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQKV 419
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G PD +TY+++ + L N K+ + F M K+E + T I +
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + + +++ + G+ P + N ++ GL
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ +A+ + M P F+ + L N ++
Sbjct: 111 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G PNL+ Y VV LC D D ++M D + +N I
Sbjct: 171 AVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + V + N F EM +P + ++ I+ L A ++ + ++E I
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+ + + ++M+ R I T L F M DR
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF-----CMHDRL 343
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 344 DKAKQMFE 351
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV+R P +++ Y + L + D AL L M+ + F+
Sbjct: 170 EAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L+ M G + PN++ Y++++ LC+ + + M+
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + +K K E E + +MIK P + + D +
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ P + N L+ G R+ D EM +R ++ VT L +
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405
Query: 250 AFYNES 255
+++
Sbjct: 406 GLFHDG 411
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+ A K F +MV + P ++ Y L L ++++AL+ M+
Sbjct: 406 GLFHDGDCDNAQKVFKQMVS--DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ ++ + K + WD+ + + PN++ YN ++ LC+ +
Sbjct: 464 KLDIYIYTTMIEGMCK---AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M G P+S TYN + +++ EM
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 11/194 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V + + F EM R + Y T + L D A K + M +
Sbjct: 371 GFCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S LD L ++++D M L ++ +Y ++ +C VD+
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--DIYIYTTMIEGMCKAGKVDDG 486
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G P+ +TYN + L + + E +M E P P N T T+
Sbjct: 487 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLP-NSGTYNTL 543
Query: 181 ----LLDADEPEFA 190
L D D+ A
Sbjct: 544 IRAHLRDGDKAASA 557
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL----MPNLIMYNAVVGLLCNNN 115
C+ F S + D L + H ++L D + G + +P+++ +N ++ +
Sbjct: 2 CYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK 61
Query: 116 DVDNVFRFFDQM----VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
D V ++M + HG + TYN++ C + ++ +M+K ++P+
Sbjct: 62 KFDVVISLGEKMQRLEIVHGLY----TYNILINCFCRRSQISLALALLGKMMKLGYEPSI 117
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ ++ + A+ + + ++E G P + L+ GL + S+ +
Sbjct: 118 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 177
Query: 232 MLNR----RILIYDVTMQKLKK 249
M+ R ++ Y V + L K
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCK 199
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + V++A+ + M C P K + + L ++ +++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + GF+L +L+ YN ++GL C+ N+ + V+ M G PDS+TYN +
Sbjct: 535 EKLKEGGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI-LENGILPLE 206
K+K VE +M ++ PT I E + A++++ + L + + P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
N+L+ LG EEM
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + + K + + + M+ + PT+ + +D + + ++L+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G+ + PN ++YN ++ + ++M P+ TYN +F+CL +
Sbjct: 642 M-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
+ + EM++ +P + + L +DE
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDE 737
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGE-----NCFPTLKF-FSNALDILVKLNDSTHTVQLWDIMV 91
TL + ++VDEAL+ M+G+ N F+ +D L K+ +L + +
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRM 396
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ +PN + YN ++ C ++ +M P+ +T N I + ++
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ FF +M K + + T I E A+ + +LE G P
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ GL + R D R E++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKL 537
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A F + ++ P V+++ T + IR +DE + M P
Sbjct: 137 KEGDIRVAQSVF-NAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 194
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C + VD
Sbjct: 195 VYTYSVLINGLCKESKMDDANELFDEMLDKG--LVPNGVTFTTLIDGHCKSGRVDLAMEI 252
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 253 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 313 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 363
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 158 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 215
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + K+ +V + +M+ P + T I L
Sbjct: 216 ELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 276 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 335
Query: 242 VTMQKLKKAFYNESR 256
V L E R
Sbjct: 336 VAYTALISGLCQEGR 350
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 21/274 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA +M + P ++ + T + L + +V +A L +M +
Sbjct: 97 GFSILGQMKEAVGLLNQMTSK-TVTP-NIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D + + QL++ + G + PN+ Y ++ LC N VD
Sbjct: 155 EPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRG--MTPNVRSYKVMINGLCKNKMVDEA 212
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M PD++ YN + + L K++++++V +F EM + QP A IT
Sbjct: 213 ANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEM-HDRGQP-----ANIITY 266
Query: 181 --LLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
LLD + + AI + I GI P + +L+ GL GRL D + +++LN
Sbjct: 267 NSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLN 326
Query: 235 R----RILIYDVTMQKL-KKAFYNESRSMRDRFD 263
+ IY V + L K+ F +E+ S+ + +
Sbjct: 327 KGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 13/229 (5%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL---- 74
+ER P+ V+ Y T + L + K V + M + +P + ++ + L
Sbjct: 30 IERLLVKPD-VVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFV 88
Query: 75 -VKLNDSTHTVQLWDIMVGIGF-------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+K+ L + +G + PN+ + +V LC + +V
Sbjct: 89 YIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAI 148
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ P+ +TYN + + K+V++ + F+ + P + I L
Sbjct: 149 MIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKM 208
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A ++ + ++P + N L+ GL R+ DV F EM +R
Sbjct: 209 VDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDR 257
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 4/189 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V EA F EM + P+ V AY + + L + +++ + F+ M
Sbjct: 202 GLCKNKMVDEAANLFKEMHSK-NMVPDTV-AYNSLIDGLCKSRRIYDVWDFIGEMHDRGQ 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +++ LD L K + + L + G + PN+ Y +V LC N + +
Sbjct: 260 PANIITYNSLLDGLCKNHQVDKAITLLTKIKNQG--IRPNIYTYTILVDGLCKNGRLRDA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G D+ Y ++ L K + E + +M N+ P + I
Sbjct: 318 QEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRA 377
Query: 181 LLDADEPEF 189
L ++D E
Sbjct: 378 LFESDRNEI 386
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ +A ++E+ P+ + Y + + +D A L MK +N
Sbjct: 187 GLCKKGHTQKAFDLL-RLMEQGITKPDTCI-YNIVIDAFCKDGMLDGATSLLNEMKQKNI 244
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D L KL+ L+ M I N+ P++ +N+V+ LC V++
Sbjct: 245 PPDIITYTSLIDGLGKLSQWEKVRTLFLEM--IHLNIYPDVCTFNSVIDGLCKEGKVEDA 302
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P+ +TYN++ + ++ F MI +P ++ I
Sbjct: 303 EEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALING 362
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ + + A++++ I +NG+ P + +VLL GL +GR + F +EM
Sbjct: 363 YVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Query: 33 ETFLITLIRG----KQVDEALKFLRVMKGEN-CFPTLKFFSNALDILVKLNDSTHTVQLW 87
E TLIRG +V +A+ + + EN C P + +D L K HT + +
Sbjct: 142 EVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCK---KGHTQKAF 198
Query: 88 DIMVGIGFNLM-PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
D++ + + P+ +YN V+ C + +D ++M PD +TY + + L
Sbjct: 199 DLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGL 258
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K + +V F EMI P + I L + E A EI Y++E G+ P E
Sbjct: 259 GKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNE 318
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ NV++ G G++ RR + M+++ I
Sbjct: 319 ITYNVVMDGYCLRGQMGRARRIFDSMIDKGI 349
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 8/250 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G + A EM ++ P ++ Y + + L + Q ++ M N +P
Sbjct: 225 KDGMLDGATSLLNEMKQK--NIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPD 282
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ +D L K ++ M+ G PN I YN V+ C + R
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE--PNEITYNVVMDGYCLRGQMGRARRI 340
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
FD M+ G PD ++Y + ++ KK+ + F E+ +N +P+ + C+ + L +
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILI 239
E A ++ + G +P + LL G G + + ++ RR I I
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460
Query: 240 YDVTMQKLKK 249
Y + L K
Sbjct: 461 YTAVINGLCK 470
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 103/247 (41%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + A + F M+++ P+ +++Y + + K++D+A++ R +
Sbjct: 327 GYCLRGQMGRARRIFDSMIDK-GIEPD-IISYTALINGYVEKKKMDKAMQLFREISQNGL 384
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ S L L ++ + +D M G +PNL + ++G N V+
Sbjct: 385 KPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGH--IPNLYTHCTLLGGYFKNGLVEEA 442
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ + Y + L KN K+ + F ++ P + I+
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A ++ + +NG LP + NV++ G ++S+++ F +E+ +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFE 562
Query: 241 DVTMQKL 247
T++ L
Sbjct: 563 AATVELL 569
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + L++ +Q + A M+ P + +++ L+ K + + L
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G L P ++ YN ++ C D+ R ++MV G FPD TY ++ K
Sbjct: 403 DLRRAG--LAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + FF EM+ QP T I L A ++ ++ GI P +
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLN 234
NV++ GL G L D +R +M++
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVS 546
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ EA + EMVE+ + P+ V Y + + + + A +F M +
Sbjct: 422 GYCRLGDLAEARRLKEEMVEQGCF-PD-VCTYTILMNGSRKVRNLAMAREFFDEMLSKGL 479
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + L+ + QL ++M+ G + P+ + YN ++ LC ++ +
Sbjct: 480 QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG--IYPDTVTYNVIIDGLCKTGNLKDA 537
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R +MV G PD +TY + + + E + M+ + QP+ + +
Sbjct: 538 KRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHT 597
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A + +L+ GI P E + NVL+ L GR R EML R
Sbjct: 598 CCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLER 652
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+L + MV G L P+++ Y +V C ++ + + +F +M+ G P+ +TYN++
Sbjct: 574 KLLNGMVSDG--LQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 631
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILEN 200
L + FHEM++ P T+L+D + E AI ++ + +N
Sbjct: 632 ALCMTGRTPLAFRHFHEMLERGLAPNKYT----YTLLIDGNCREGNWADAIRLYFEMHQN 687
Query: 201 GILPLEASANVLLVG 215
GI P + N L G
Sbjct: 688 GIPPDYCTHNALFKG 702
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 13/247 (5%)
Query: 10 EANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK--F 66
+ +GEM++ R E ++ Y T L + ++ + DEA L+ M+ + +L
Sbjct: 220 DVRAVYGEMLQLRVEPT---IVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVT 276
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
F+ + L + + V+L D M + + YN ++ L V +
Sbjct: 277 FNVVISFLAREGHLENAVKLVDSMR---LSKKASSFTYNPLITALLERGFVRKAEALQME 333
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M G P +TYN I L+K ++ + F EM P + + + A
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDV 242
+ A+ + + G+ P + N L+ G LG L++ RR EEM+ + + Y +
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453
Query: 243 TMQKLKK 249
M +K
Sbjct: 454 LMNGSRK 460
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V ++ T + IR +DE + M+ P
Sbjct: 148 KEGEIKLAQSVF-DAITKWGLRPTAV-SFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + + +L++ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDYANELFNEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 62/138 (44%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C ++ FD + G P ++++N + I+ + E
Sbjct: 135 SLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLK 194
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+ M + QP + I L + ++A E++N +L+NG++P + L+ G
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 220 GRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 255 GRVDLAMEIYKQMLSQSL 272
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 8/249 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G VVEA++ +M R P+ V++Y T + + ++ LK + M+ + P
Sbjct: 267 GRVVEAHQLLLQMELR-GCIPD-VISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPY 324
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ + +L K ++ M+ G + P+ ++Y ++ C +V + +R FD
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEG--IAPDGVIYTTLIDGFCKLGNVSSAYRLFD 382
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TY + L + +V E + FHEM+ +P + I
Sbjct: 383 EMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 442
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYD 241
+ + A + N +L+ G+ P + L GL G + EM + I Y+
Sbjct: 443 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 502
Query: 242 VTMQKLKKA 250
+ L KA
Sbjct: 503 SLVNGLCKA 511
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GNV A + F EM +R + +P+ + Y + L + +V EA K M +
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKR-KISPDFI-TYTAVICGLCQTGRVMEADKLFHEMVCKRL 424
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K L + M+ +G L PN++ Y A+ LC +VD
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG--LTPNIVTYTALADGLCKCGEVDTA 482
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G + TYN + L K + + +M + P + T +
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E A E+ +L+ + P + NVL+ G G L D + + ML + I+
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Query: 241 DVTMQKLKKAF 251
T L K +
Sbjct: 603 ATTYNSLIKQY 613
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P++I Y+ V+ C ++ V + ++M G P+ TYN + L K KV E E
Sbjct: 285 IPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAER 344
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EMI P + T I A +++ + + I P + ++ GL
Sbjct: 345 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 404
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
GR+ + + EM+ +R+ +VT L + E + M++ F
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK-MKEAFS 449
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 52/138 (37%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N YN + LC V + QM G PD ++Y+ + + ++ V
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM +P P I +L + A + ++ GI P L+ G L
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 220 GRLSDVRRFAEEMLNRRI 237
G +S R +EM R+I
Sbjct: 372 GNVSSAYRLFDEMQKRKI 389
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/269 (18%), Positives = 107/269 (39%), Gaps = 6/269 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + EA +M++ P +++ Y L + +VD A + L M +
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQ-MGLTP-NIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +++ ++ L K + V+L M GF+ P+ + Y ++ C + ++
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH--PDAVTYTTLMDAYCKSREMVRA 552
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM+ P +T+N++ + + + E M++ P + I
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ EI+ + G++P + N+L+ G + + +M+ + +
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 241 DVTMQKLKKAFYNESR--SMRDRFDSLER 267
+ L K FY + R+ F+ + R
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRR 701
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 109/238 (45%), Gaps = 10/238 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ GNV + EMV R ++P+ V + + + +AL+ L M+ N
Sbjct: 205 GFKESGNVTSVELFYHEMVRR-GFSPDGV-TFNIRIDAYCKKGCFGDALRLLEEMERRNV 262
Query: 61 FPTLKFFSNALDI--LVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDV 117
PT++ + + LV+ D + W + I N++ + YNA++ L D+
Sbjct: 263 VPTIETITTLIHGAGLVRNKD-----KAWQLFKEIPSRNMVADAGAYNALITALVRTRDI 317
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
++ D+MV DS+TY+ +F ++++ + V + +M ++ + P
Sbjct: 318 ESASSLMDEMVEKCIELDSVTYHTMFLGFMRSRGIEGVSKLYQKMTQSNFVPKTRTVVML 377
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + ++ +W Y++E G P + ++L+ GL G + D +++ML R
Sbjct: 378 MKYFCQNYRLDLSVCLWKYLVEKGYCPHAHALDLLVTGLCARGLVHDAFECSKQMLER 435
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG VEA K +M++R +P+ + Y + + ++D+A + M ++CFP
Sbjct: 267 KEGKFVEAEKLHDDMIKR-SIDPD-IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L ++ + K +L+ M G L+ + + Y ++ L ++ D DN +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G PD +TY+++ + L N K+ + F M K+E + T I +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + + +++ + G+ P + N ++ GL
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ +A+ + M P F+ + L N ++
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G PNL+ Y VV LC D+D F ++M D + +N I
Sbjct: 134 AVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + V + N F EM +P + ++ I+ L A ++ + ++E I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+ + + ++M+ R I T L F M DR
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF-----CMHDRL 306
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 307 DKAKQMFE 314
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M + P L F+ +D VK +L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + P++ YN+++ C ++ +D + F+ MV FPD TYN + +
Sbjct: 279 DDMIKRSID--PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K+V + F EM + T I L + + A +++ ++ +G+ P
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL GL N G+L + M + I IY ++ + KA
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV+R P +++ Y + L + +D A L M+ + F+
Sbjct: 133 EAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L+ M G + PN++ Y++++ LC+ + + M+
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + +K K E E +MIK P + I D +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ P + N L+ G R+ D EM +R ++ VT L +
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 250 AFYNES 255
+++
Sbjct: 369 GLFHDG 374
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+ A K F +MV + P ++ Y L L ++++AL+ M+
Sbjct: 369 GLFHDGDCDNAQKVFKQMVS--DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ ++ + K + WD+ + + PN++ YN ++ LC+ +
Sbjct: 427 KLDIYIYTTMIEGMCK---AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M G PDS TYN + +++ EM
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V + + F EM R + Y T + L D A K + M +
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S LD L ++++D M L ++ +Y ++ +C VD+
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--DIYIYTTMIEGMCKAGKVDDG 449
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
+ F + G P+ +TYN + L + + E +M E P P
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLP 498
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 7/258 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
W N+VEA + + EM+E+ +P+ V+ + T + L+RG++ EA+K +MK +
Sbjct: 340 AWCNARNLVEAGRVWNEMLEK-GMDPD-VVVHNTMIEGLLRGQRRPEAVKMFELMKAKGP 397
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ ++ M P++ Y ++ N +D V
Sbjct: 398 PPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEA--KCQPDVATYTCLLVGYGNAKQMDRV 455
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT--PLNCATAI 178
++M G PD+ TYN + + L + + +MIK +PT N
Sbjct: 456 TAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 515
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ D++ +W + + GI P S V + G GR + ++ EEM+N+ +
Sbjct: 516 YFVGDSNY-AMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMK 574
Query: 239 IYDVTMQKLKKAFYNESR 256
+ K F +
Sbjct: 575 APQIDYNKFAADFSKAGK 592
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 94/227 (41%), Gaps = 9/227 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V ++ L+ L + EA + M G+ P L+ ++ + + ++W+
Sbjct: 297 VESFNCLLVALAKEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNLVEAGRVWN 355
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + P+++++N ++ L + F+ M G P+ TY M+ K
Sbjct: 356 EMLEKGMD--PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCK 413
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL---DADEPEFAIEIWNYILENGILPL 205
K+ F EM + + QP + AT +L+ +A + + + + + G P
Sbjct: 414 QGKMDMAMECFEEMQEAKCQP---DVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPD 470
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+ N L+ L N D R ++M+ + + T + K+++
Sbjct: 471 ARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYF 517
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 6/246 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
GEM+ R + + + + + + L G ++ EA LR M P + + L+ L
Sbjct: 150 LGEMLRR--GHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207
Query: 75 VKLNDSTHTVQLWDIMV----GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ V+L + M+ G G + PNL+ Y ++ LC + +D F +M
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G PD + Y+ I + + + F+EM+ P + I L A + E A
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+ +++ G P + N L+ G GR+ D R M ++ I V+ L
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387
Query: 251 FYNESR 256
+ R
Sbjct: 388 YCKSGR 393
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EAN M++R E +P+ Y T + ++D+A M+ +
Sbjct: 320 KAGKMEEANHLLKLMIQRGE-SPD-TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETD 377
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ K +L+ M + +MP +I YN ++ L V + +
Sbjct: 378 AVSYNVLINGYCKSGRMVEAKKLYREM--MCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT--PLNCATAITML 181
F +M H P+S TYN++ + L KN + E FH + +++QP+ NC I L
Sbjct: 436 FGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC--LIDGL 493
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A + E A E++N + G+ P + V++ GL G+L + + M +
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553
Query: 242 VTMQKLKKAF 251
VT L + F
Sbjct: 554 VTFNTLMRGF 563
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A FGEM + + PE Y L L + + EA++ ++ +
Sbjct: 422 GLFREGKVRDAWNLFGEM-KVHDLTPESC-TYNILLDGLCKNNHLSEAMELFHYLENHDF 479
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+++ F+ +D L K +L++ + G L PN+I Y ++ LC + ++N
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG--LEPNVITYTVMIHGLCKSGQLENA 537
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G P+ +T+N + +N ++ +V EM + ++ P A+ I++
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPD----ASTISI 593
Query: 181 LLD 183
++D
Sbjct: 594 VVD 596
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G +VEA K + EM+ + E P V+ Y T L L R +V +A MK +
Sbjct: 387 GYCKSGRMVEAKKLYREMMCK-EIMPT-VITYNTLLTGLFREGKVRDAWNLFGEMKVHDL 444
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ LD L K N + ++L+ + F P++ ++N ++ LC ++
Sbjct: 445 TPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ--PSIQIFNCLIDGLCKARKIEIA 502
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+++ G P+ +TY ++ L K+ ++ ++ F M + P + T +
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
DE + +E+ + E P ++ ++++
Sbjct: 563 FCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+++ I+ +++ EA F++ M+ P ++N + L DS + L+ M +G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ + N+ ++ ++ + VD D+M + PD + YN+ +C K KV
Sbjct: 231 YAV--NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDM 288
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
FHEM N + + I +L AD A+E++ ++ +N +P + N +++
Sbjct: 289 AWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIM 348
Query: 215 GLRNLGRLSDVRRFAE 230
G G+ D E
Sbjct: 349 GYGMAGKFEDAYSLLE 364
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y L L R QVDEALK MK ++ P L ++ +D+L K + + D
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PN+I N +V LC +D+ F+ + PD++TY + E L +
Sbjct: 434 AMKDAG--LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP---- 204
+ +V E + +M+ P + + I E +I+N +L G P
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551
Query: 205 --------LEAS----ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+A L ++NLG + D R + ILI+ + Y
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT-------ILIHGLVKAGFAHEAY 604
Query: 253 NESRSMRDRFDSLERR 268
+M+++ L+ R
Sbjct: 605 ELFYTMKEQGCVLDTR 620
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM + + + V+ Y + + L + ++DEA K +
Sbjct: 628 GFCKSGKVNKAYQLLEEM--KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + ++ G L PN+ +N ++ L ++
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG--LTPNVYTWNCLLDALVKAEEISEA 743
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P+ +TY+++ L K +K ++ F+ EM K ++P T I+
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A A ++ E G + A N ++ GL N R SD R EE + IY
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 241 DVT 243
T
Sbjct: 864 TKT 866
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +A++ E VE FE ++ AY T ++ + ++A L + + C
Sbjct: 313 GVLCKADR-LNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L L + ++ ++ M + +PNL YN ++ +LC ++
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKK---DAIPNLSTYNIMIDMLCKAGKLETA 428
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M G FP+ +T N++ + L K +++ + + F + +P + + I
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A +++ +L+ +P L+ GR D + EML
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + +++D+A + + C P + + ++ L + +L++ M + N +
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM--LDANQI 511
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN ++Y +++ ++ + +++M+ G PD L N +C+ K ++ +
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F E+ + P + I L+ A A E++ + E G + + N ++ G
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 219 LGRLSDVRRFAEEM 232
G+++ + EEM
Sbjct: 632 SGKVNKAYQLLEEM 645
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +K + EM+ R +P+ +L T++ + + ++++ + +K P
Sbjct: 526 KCGRKEDGHKIYNEML-RLGCSPD-LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD 583
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + LVK + +L+ M G L + YN V+ C + V+ ++
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
++M G P +TY + + L K ++ E F E
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 41/300 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG V +A F EM+ + P V+ Y + + L + + +D+A+ L+ M +
Sbjct: 209 GFFKEGEVDKAYFLFHEMMG--QGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L V+L M G G L P+++ Y+ ++ C
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG--LQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 121 FRFFDQMVFHGAFPDSLTYNMI-------------------------------FECLI-- 147
FD MV G P+S Y+++ F LI
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384
Query: 148 --KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ V + F EM +N +P ++ +T I +L E A+ +N ++ G+ P
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM--RDRFD 263
S L+ GL ++G V A EM+NR I + M + E R + +D FD
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 504
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 10/239 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPE-----HVLAYETFLITLIRGKQVDEALKFLRVMK---GE 58
+ + N+T M F PE V +Y + L K+ EAL+ L M G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
NC P + ++ +D K + L+ M+G G L P+++ YN+++ LC +D
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQG--LPPDVVTYNSLIDGLCKAQAMD 252
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
M G PD+ TYN++ ++ E +M + QP + + I
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A +++ ++ G P ++LL G G L DVR + M+ I
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF---PDSLTYNMIFECLIKNKKVHEV 155
P++ YNA++ LC M G + P+ ++YN + + K +V +
Sbjct: 160 PDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
FHEM+ P + + I L A + A+ I ++ + G++P + N+++ G
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279
Query: 216 LRNLGRLSDVRRFAEEM----LNRRILIYDVTMQ-KLKKAFYNESRSMRDRFDSLERRWK 270
+LG+L + R ++M L ++ Y + +Q K E+RS+ FDS+ R+ +
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV---FDSMVRKGQ 336
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 4/261 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +++ M+ + P A+ + + VD+A+ M+
Sbjct: 349 GYATKGALIDVRDLLDLMIR--DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + IL K V ++ MV G L PN+I + +++ LC+ + V
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG--LSPNIISFTSLIHGLCSIGEWKKV 464
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G PD++ N I + L K +V E ++FF +I +P ++ T I
Sbjct: 465 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + +I+ + ++ G+ P + N LL G GR+ D EM + +
Sbjct: 525 YCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFC 584
Query: 241 DVTMQKLKKAFYNESRSMRDR 261
+T + + R + R
Sbjct: 585 AITSNIMLHGLFQAGRIVAAR 605
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETF---LITLIRGKQVDEALKFLRVMKGENC 60
K G V +A F +MV E +++++ + L ++ K+V+E L F + +G +
Sbjct: 422 KTGRVEDAVYHFNQMVS--EGLSPNIISFTSLIHGLCSIGEWKKVEE-LAFEMINRGIH- 477
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + +D L K +D+++ IG P+++ YN ++ C +D
Sbjct: 478 -PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK--PDVVSYNTLIDGYCFVGKMDES 534
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+MV G PDS TYN + KN +V + + EM + + + + +
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A A E++ +++ G + N +L GL
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 77/214 (35%), Gaps = 40/214 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G +V A + + +MV+R + Y T L L VDEAL+ ++ +
Sbjct: 594 GLFQAGRIVAARELYMKMVDR--GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 651
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ FS ++ L+K+ +D
Sbjct: 652 ELDVRTFSIVINALLKV-------------------------------------GRIDEA 674
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F MV G PD +TY+++ + I+ + E +N F M KN +
Sbjct: 675 KSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRR 734
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
LL+ + A I E LEAS LL+
Sbjct: 735 LLEKGDVRRAGTYLTKIDEKN-FSLEASTAALLI 767
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 3/206 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + V++A+ + M C P K + + L ++ +++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + GF+L +L+ YN ++GL C+ N+ + V+ M G PDS+TYN +
Sbjct: 535 EKLKEGGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI-LENGILPLE 206
K+K VE +M ++ PT I E + A++++ + L + + P
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEM 232
N+L+ LG EEM
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEM 678
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + + K + + + M+ + PT+ + +D + + ++L+
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G+ + PN ++YN ++ + ++M P+ TYN +F+CL +
Sbjct: 642 M-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
+ + EM++ +P + + L +DE
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDE 737
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 38 TLIRGKQVDEALKFLRVMKGE-----NCFPTLKF-FSNALDILVKLNDSTHTVQLWDIMV 91
TL + ++VDEAL+ M+G+ N F+ +D L K+ +L + +
Sbjct: 338 TLSKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRM 396
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ +PN + YN ++ C ++ +M P+ +T N I + ++
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ FF +M K + + T I E A+ + +LE G P
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ GL + R D R E++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKL 537
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 16/233 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R +V+ Y L ++ KQ+ +A M C+P
Sbjct: 499 KAGLIEQARSWFDEM--RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN--------------LMPNLIMYNAVVG 109
+S +D L K + ++++ ++G N + PN++ Y A++
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALID 616
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC V + D M+ G P+ + Y+ + + K K+ + F M K + P
Sbjct: 617 GLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLP 676
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ + I + + A+++ + +L + P + ++ GL +G +
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 20/248 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG--- 57
+ K +++A+ F MV+ + + + Y + L + ++ +A + + G
Sbjct: 531 AYLKSKQLIQAHDIFHRMVDAACY--PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588
Query: 58 -----------ENC--FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+ C P + + +D L K + +L D M+ G PN I+Y
Sbjct: 589 NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE--PNQIVY 646
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+A++ C +DN F +M G P TY + + + K+ ++ EM+
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN 706
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ P + I L E E A+ + + + E G P + L+ GL G+
Sbjct: 707 DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA 766
Query: 225 VRRFAEEM 232
+ ++M
Sbjct: 767 SLKLFKQM 774
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 14/259 (5%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M+E+ ++N + VL + + L+ +EA+ FL M+ +C P + + L +K
Sbjct: 261 MLEKEDFNLDTVLCTQ-MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 319
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ ++M+ G N PN ++N++V CN D ++ F++M G+ P +
Sbjct: 320 KQFGWCKRIINMMMTEGCN--PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYV 377
Query: 138 TYNMIFECLIKNKKVHE------VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN+ + +++ VE + EM+ +N A L + E A
Sbjct: 378 AYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAF 437
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
+I ++ G +P ++ ++ L ++ +EM +N + Y + +
Sbjct: 438 QILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF 497
Query: 248 KKA-FYNESRSMRDRFDSL 265
KA ++RS D S+
Sbjct: 498 CKAGLIEQARSWFDEMRSV 516
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 87/224 (38%), Gaps = 22/224 (9%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
++A + L+ M + P ++ + L + + L+ M G N P++ Y
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN--PDVYTYT 491
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ C ++ +FD+M G P+ +TY + +K+K++ + + FH M+
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG----------------ILPLEASA 209
P + + I L A E + A E++ ++ I P +
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
L+ GL ++SD + ML ++YD + K
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F M + + P V Y + + + + ++D A+K L M ++C
Sbjct: 652 GFCKIGKIDNAQEVFLRMT-KCGYLPS-VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSC 709
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + + L +M G + PN++ Y A++ L D
Sbjct: 710 NPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCS--PNVVTYTALIDGLGKTGKADAS 767
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ F QM G P+ +TY ++ + E EM W
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHW 814
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + EA M++ HV Y T + + + D+A++ R M NC
Sbjct: 138 GLCKEAKLDEAVSVLNGMIKNGGTPNAHV--YNTLINGFMGVSKFDDAIRVFREMGSTNC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L M+ G+ P +I Y+ ++ LC + V+
Sbjct: 196 SPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWK--PCVITYSLLMKGLCQGHKVEMA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ +G PD N++ L K + +M N W P N T T+
Sbjct: 254 LQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM--NRWNCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW IL NG+ P S N+ L GL + R+S F ++ L ++
Sbjct: 311 MEGFYKDGDIRN-ALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKK 369
Query: 237 I 237
I
Sbjct: 370 I 370
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE + VE + T+G +V+ F + ++++L+ L + + +
Sbjct: 82 WELMTQSGFVEDSTTYGILVDGF-----------------CKNGYINKSLRVLEIAEEKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K V + + M+ G PN +YN ++ + D+
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGT--PNAHVYNTLINGFMGVSKFDD 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L K ++ E + EM++ W+P + + +
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
L + E A+++WN ++ NG+ P N+L+ GL ++G+
Sbjct: 243 GLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 8/230 (3%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D A + + M P ++ L+ + ++LW++M G N++ +
Sbjct: 6 IDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELM---GREXSQNVVSF 62
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ L N DVD ++ M G DS TY ++ + KN +++ +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEE 122
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ I L + + A+ + N +++NG P N L+ G + + D
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDD 182
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD----SLERRWK 270
R EM + VT L R + +D LE+ WK
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGER-FAEAYDLVKEMLEKGWK 231
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L +G++ EA ++ M + P + +S + L + + +QLW+
Sbjct: 199 VVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWN 258
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ G L P++ M N ++ LC+ + M P+ +T+N + E K
Sbjct: 259 QVISNG--LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYK 316
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ + + +++N QP ++ + L FAI L I P
Sbjct: 317 DGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAP 372
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
EA EM+E+ W P V+ Y + L +G +V+ AL+ + P ++ +
Sbjct: 216 AEAYDLVKEMLEK-GWKP-CVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLN 273
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ L + + + L+ M +N PNL+ +N ++ + D+ N + +++
Sbjct: 274 ILIHGLCSVGKTQLALMLYFDMNR--WNCAPNLVTHNTLMEGFYKDGDIRNALGIWARIL 331
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+G PD ++YN+ + L ++ F + + + P+
Sbjct: 332 RNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVM--KGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++Y T + +L + EAL ++ M +G C P + F+ + K + + L+
Sbjct: 196 ISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLF 255
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV G ++P++ YN++V LC +D QMV G PD +TYN I
Sbjct: 256 NEMVQKG--VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ E F +M P + ++ ++ L + A EI+ Y+ G +P
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
S ++LL G GR +D+ M ++ I+
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIV 404
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 12/238 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G V +A F EMV++ P+ V Y + + L + + +D+A LR M +
Sbjct: 241 GFFKQGEVSKACNLFNEMVQK-GVVPD-VGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + +++ M G L+P+ + +++ + LC + +
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG--LIPDTVTFSSFMSSLCKHGRSKDA 356
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G PD ++Y+++ + ++ N FH M + NC I +
Sbjct: 357 EEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMAD---KGIVSNCH-CINI 412
Query: 181 LLDADEP----EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L+ A + A+ ++ + G+ P + + L+ +GRL+D +M++
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + FFS+ + L ++++++ IG P ++ +N+++ C ++ F
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR--PTIVTFNSLIDGYCLVGKMEKAF 568
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D MV G PD +T N + K+ K+ + F EM+ + +PT + + L
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RN 218
L A A ++++ ++++G + +LL GL RN
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 666
Score = 44.3 bits (103), Expect = 0.055, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 99/233 (42%), Gaps = 7/233 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA F EM + + +V+ Y T + R ++ +A++ M P
Sbjct: 419 KRGMMDEAMLVFTEM--QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPN 476
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + + D + M+ G + PN++ +++++ LC V +
Sbjct: 477 TAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH-RPNIVFFSSIIHSLCIEGRVMDAQDV 535
Query: 124 FDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F+ ++ G P +T+N + + CL+ K+ + M+ +P + T ++
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLV--GKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGY 593
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + + + ++ +L + P + N++L GL GR S ++ EM++
Sbjct: 594 CKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 4/152 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G A K F EM++ + Y+ L L R DEA+ + +C
Sbjct: 627 GLLRAGRTSAAKKMFHEMID--SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 684
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + ++ L K+ L+ + G L+PN+ Y ++ L V+
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSG--LVPNVSTYGVMIRNLLKEGSVEEA 742
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
F M G P S N I L++ +
Sbjct: 743 DTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 774
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
YE + +L + ++D A K + MK +N P+ F++ +D + K +++++ M
Sbjct: 235 YELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVY--ME 292
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
GF L P+ MY +++ ++ R +D+M G P+ Y M+ E K+ K
Sbjct: 293 MQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGK 352
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F +M K + PTP + + M + + + A++++N + G+ P ++
Sbjct: 353 LETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTA 412
Query: 212 LLVGLRNLGRLSDV 225
LL L N +L DV
Sbjct: 413 LLTLLAN-KKLVDV 425
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A K F EM E+ P L + + + ++ + ++D ++K M+G P+
Sbjct: 244 KSGRLDAAFKLFQEMKEK-NLRPS-FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPS 301
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ VK +++WD M GF PN +Y VV + ++
Sbjct: 302 ATMYVSLIESFVKAGKLETALRIWDEMKKAGFR--PNYGLYTMVVESHAKSGKLETAMSV 359
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F M G P TY+ + E + +V ++ M +P L+ TA+ LL
Sbjct: 360 FSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPG-LSTYTALLTLL 417
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN+++ L N F ++ M G D TY ++ L K+ ++ F EM
Sbjct: 200 YNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMK 259
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ +P+ L A+ + + A + +++++ + G+ P L+ G+L
Sbjct: 260 EKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLE 319
Query: 224 DVRRFAEEM 232
R +EM
Sbjct: 320 TALRIWDEM 328
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + IR +D+ K M P
Sbjct: 148 KEGEIWIAQSVF-DSITKWGLRPS-VVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L++ M+ G L+PN + + ++ C N VD+
Sbjct: 206 VYTYSVLINGLCKESKMNEANDLFNEMLDKG--LVPNGVTFTTLIDGHCKNGKVDSAMET 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E+ +++ I + + L+ GL GR +D + EML+
Sbjct: 324 EGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLS 374
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A +T+ +M+ + + P+ ++ Y T + L + + +A L M+ +
Sbjct: 250 GHCKNGKVDSAMETYKQMLSQC-FLPD-LITYNTLIYGLCKKGDLKQAQDLLDEMRMKGL 307
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D K D +L + MV L + + Y A++ LC +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRL--DDVAYTALISGLCQEGRATDA 365
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ +M+ G PD+ TY MI K + V EM + P
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + +++EA M + P F+ +D K ++ +
Sbjct: 206 VYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYK 265
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ F +P+LI YN ++ LC D+ D+M G PD +TY + + K
Sbjct: 266 QMLSQCF--LPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCK 323
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ M+K + + I+ L A ++ +L G+ P
Sbjct: 324 EGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKP 379
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + K +M++R + P+ V+A+ + ++ ++ EA + + M
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKR-KITPD-VVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N + D+MV G PN+ +N ++ C N +D+
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKANLIDDG 406
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G D++TYN + + + K+ + F EM+ +P ++ +
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDV 225
L D EPE A+EI+ I E + L+ N+++ G+ N ++ D
Sbjct: 467 LCDNGEPEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 511
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 4/246 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A MVE + P V Y L + + Q A++ LR M+
Sbjct: 191 GKVSDAVLLIDRMVET-GFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+S +D L K + L++ M GF ++I+Y ++ C D+ +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M+ PD + ++ + +C +K K+ E E EMI+ P + + I +
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
+ + A + + ++ G P + N+L+ G + D +M R ++ VT
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 246 KLKKAF 251
L + F
Sbjct: 427 TLIQGF 432
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 41/238 (17%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G++ A F EM ++ F+ + ++ Y T + + D+ K LR M
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKAD---IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + FS +D VK +L M+ G + P+ + Y +++ C N +D
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDK 370
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
D MV G P+ T+N++ K + +
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD------------------------- 405
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+E++ + G++ + N L+ G LG+L + +EM++RR+
Sbjct: 406 ----------GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A G+++ + + P+ V + T + L +V EAL+ + M PTL +
Sbjct: 126 AFSAMGKII-KLGYEPDTV-TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L + V L D MV GF PN + Y V+ ++C + +M
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQ--PNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
D++ Y++I + L K+ + N F+EM ++ + T I A +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
++ +++ I P + + L+ G+L + +EM+ R I VT L
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 251 FYNESR 256
F E++
Sbjct: 362 FCKENQ 367
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YN ++ +CN + VD+ + F + G PD TYN++ L K + E + F +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 163 IKNEWQP 169
++ P
Sbjct: 554 EEDGHSP 560
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P LI ++ + ++ D V QM G + T +++ C + +K+ +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++IK ++P + +T I L A+E+ + ++E G P + N L+ GL
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 219 LGRLSDVRRFAEEML 233
G++SD + M+
Sbjct: 190 NGKVSDAVLLIDRMV 204
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 150 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPD 207
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 208 VYTYSVLINGLCKESKMDGANELFDEMLVKG--LVPNXVTFTTLIDGHCKNGRVDLAMEI 265
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 266 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCK 325
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A +++ I + + L+ GL GR D + EML+
Sbjct: 326 EGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 116 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 173
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ F E
Sbjct: 174 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDE 233
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 234 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 293
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 294 LKQAHDLIDEM 304
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G P++ Y+ ++ LC + +D
Sbjct: 171 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--XXPDVYTYSVLINGLCKESKMDGAN 228
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 229 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 288
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 289 CKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDD 348
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 349 VAYTALISGLCQEGRSV 365
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 136 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 195
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + P + I L + + A E+++ +L G++P + L+ G
Sbjct: 196 KSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCK 255
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 256 NGRVDLAMEIYKQMLSQSLL 275
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 9/250 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + + + + EM E V+ Y T + R ++V++AL+ + M E
Sbjct: 286 GWFRLRKLKQGERLWAEMKENMR---PTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGI 342
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDI--MVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ +D L + + + + ++ IG P YN++V C D+
Sbjct: 343 APNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIG----PTDSTYNSLVKGFCKAGDLV 398
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ M+ G P + TYN F + +K+ E N + ++I++ + P L +
Sbjct: 399 GASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLV 458
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
ML + ++ + A+++ + NG A++ +L+ L + RL + E+M+ R I+
Sbjct: 459 KMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIV 518
Query: 239 IYDVTMQKLK 248
+T Q++K
Sbjct: 519 PQYLTFQRMK 528
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 7/231 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
+ P+ V++Y T + R ++D+ K + VMK + P + + + +L ++
Sbjct: 720 YTPD-VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ + M+ G ++P+ ++Y ++ C D+ +FF +M PD LTY I
Sbjct: 779 EEAFSEMIRQG--ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ + E FHEM +P + I A + A + N++++ G
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 896
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
P + L+ GL G L EM L I Y+ + L K+
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A+K F EM R + P+ VL Y + + + EA K M +
Sbjct: 803 GFCKRGDIRAASKFFYEMHSR-DITPD-VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ ++ K ++ + M+ G + PN++ Y ++ LC D+D+
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSA 918
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
+M G P+ TYN I L K+ + E E++ LN T T
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV-----GEFEAAGLNADTVTYT 973
Query: 180 MLLDA----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L+DA E + A EI +L G+ P + NVL+ G G L D + ML +
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 236 RILIYDVTMQKLKKAF 251
I T L K +
Sbjct: 1034 GIAPNATTFNSLVKQY 1049
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 5/211 (2%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
WN V +Y + + + ++ EA L +M+ + P + +S ++ + +
Sbjct: 687 WN---VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L ++M G L PN +Y +++GLLC + F +M+ G PD++ Y +
Sbjct: 744 WKLIEVMKRKG--LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ K + FF+EM + P L I+ + A ++++ + G+
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
P + L+ G G + D R M+
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++I Y+ VV C ++D V++ + M G P+S Y I L + K+ E E
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EMI+ P + T I + A + + + I P + ++ G
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+G + + + EM + + VT +L Y ++ M+D F
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELING-YCKAGHMKDAF 884
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA K GE E N + V Y T + + ++D+A + L+ M G+
Sbjct: 943 GLCKSGNIEEAVKLVGEF-EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000
Query: 61 FPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT+ F+ N + L D + W + GI PN +N++V C N++
Sbjct: 1001 QPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIA----PNATTFNSLVKQYCIRNNL 1055
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ M G PD TY + + K + + E F EM
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 16/231 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R V+ Y + ++ KQV +A M C P
Sbjct: 504 KAGLIEQAQWLFEEM--RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 561
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIG--------------FNLMPNLIMYNAVVG 109
+ +D L K + + +++ ++G L PN++ Y A+V
Sbjct: 562 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 621
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + VD+ D M+ G P+ + Y+ + + K K+ + F +M K + P
Sbjct: 622 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 681
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ + I + + A+++ + +L++ P + ++ GL +G
Sbjct: 682 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 732
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + +D L K + H +L D M+ G PN I+Y+A++ C +D+
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE--PNHIVYDALIDGFCKAGKIDSAQ 668
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F QM G P TY + + + K+ ++ +M+K+ P + I L
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 728
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
E E A+++ + + E G P + L+ GL
Sbjct: 729 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D A K M NC +N L + QL M+ GF +P+ Y
Sbjct: 403 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF--VPDTSTY 460
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ V+ LC+ V+ F F +M G PD TY ++ + K + + + F EM
Sbjct: 461 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 520
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
PT + I L A + A +I++ +++ G P + + L+ GL G +S
Sbjct: 521 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 579
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 17 EMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
+M+ER ++ + VL T +I+ L+ DEA+ FL M+ +C P + + L +
Sbjct: 265 DMIEREDFKLDTVLC--THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 322
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ ++M+ G N PN ++N++V CN D ++ ++M G P
Sbjct: 323 KKKQLGWCKRIINMMMTEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380
Query: 136 SLTYNMIFECLIKNKKVHE------VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+ YN+ + +K+ E + EM+ +N A L + +
Sbjct: 381 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 440
Query: 190 AIEIWNYILENGILP 204
A ++ ++ G +P
Sbjct: 441 AFQLIKEMMRKGFVP 455
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 18/222 (8%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + + +++A M+ C PT+ ++ + +K ++
Sbjct: 492 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF----------------HGA 132
MV G PN + Y A+V LC ++ F + +++ H
Sbjct: 552 RMVDAGCR--PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
P+ +TY + + L K KV M+ + +P + I A + + A E
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ + + G LP + L+ + GRL + +ML
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 711
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 6/189 (3%)
Query: 11 ANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A K +GEM+ N +V + L + + D+A + ++ M + P +S
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSK 462
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L L+ M +G + P++ Y ++ C ++ F++M
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVG--VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 520
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P +TY + +K K+V + + FH M+ +P + + L A
Sbjct: 521 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 580
Query: 190 AIEIWNYIL 198
A E++ ++
Sbjct: 581 AFEVYAKLI 589
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F +M + + P V Y + + + + ++D A+K L M ++C
Sbjct: 657 GFCKAGKIDSAQEVFLQMT-KCGYLPS-VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 714
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV 108
P + ++ +D L ++ +S ++L +M G + PN++ Y A++
Sbjct: 715 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS--PNVVTYTALI 760
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + + +VD AL+ L++M+ + C P +++ + LVK + L
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G ++PN+I Y ++ C+ +D DN FR F+ M +G PD Y ++ + L
Sbjct: 521 TKMQKDG--IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E +F +++ T + T I A +FA + +++ G P
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ +VLL L RL++ ++M R I
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
++ D+AL+ M C L+ F ++ L+K + +L + + G L+PN+
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG--LVPNV 462
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
I Y +++ C + VD M G P++ TYN + L+K+KK+H+ +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M K+ P + T + D + + A ++ + +NG+ P E + VL L GR
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582
Query: 222 LSDVRRF 228
+ F
Sbjct: 583 AEEAYSF 589
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L K V +AL +MK + C P ++ F+ + L K L+D M
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++P+++ YNA++ +++ + + M +G PD TYN + L ++
Sbjct: 315 PQNG--VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQ 371
Query: 151 KVHEVENFFHEMIKNEWQPT 170
K E E + +K + PT
Sbjct: 372 KTEEAEELLNNAVKEGFTPT 391
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 17 EMVERFEWNP-EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
EM+E+ P EH AY L + + +EA F+ V KG T +++ +D
Sbjct: 556 EMMEQNGLKPDEH--AYAVLTDALCKAGRAEEAYSFI-VRKGVAL--TKVYYTTLIDGFS 610
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ L + M+ G P+ Y+ ++ LC ++ DQM G
Sbjct: 611 KAGNTDFAATLIERMIDEGCT--PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE-IW 194
Y ++ + +++ K + ++EM + +P+ AT T+ +++ E +E
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS----ATTYTVFINSYCKEGRLEDAE 724
Query: 195 NYILE---NGILPLEASANVLLVGLRNLG 220
+ IL+ G+ P + N+L+ G ++G
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A F M + V+ Y ++ + ++++ALK +M+ C
Sbjct: 297 GLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 354
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + N L + + +L + V GF P ++ + ++ C D+
Sbjct: 355 HPD-DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFT--PTVVTFTNLINGYCMAEKFDDA 411
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R ++M+ D + + LIK ++ E + +E+ N P + + I
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ + + A+E+ + +G P + N L+ GL
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 95/243 (39%), Gaps = 44/243 (18%)
Query: 32 YETFLITLIRGKQVDE-------ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
YE +++++ E A++ +R + K ++ AL L + + + +
Sbjct: 109 YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMG 168
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT------ 138
+++ +V G L+P+ + YN ++ C D+ R+F ++ G P++ T
Sbjct: 169 RVYSQLVQDG--LLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 226
Query: 139 -----------------------------YNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
Y ++ + L K V + F M ++ P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 286
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
I+ L + A +++ + +NG++P + N ++VG LGR++D +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 230 EEM 232
E M
Sbjct: 347 ELM 349
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 31/236 (13%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + +A +M ER P+ V+ Y + +D A L+ M G +C
Sbjct: 714 YCKEGRLEDAEDLILKM-EREGVAPD-VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 771
Query: 62 PTLKFFSNALDILVKLN----DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + L L+K N S T +W+++ ++
Sbjct: 772 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI-------------------------EL 806
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++ ++MV HG P TY+ + K ++ E M P
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I D E A+ + + E G P S +L+VGL N G V+ ++L
Sbjct: 867 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+ + ++ LC + V + FD M +G P +TYN + K ++++
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M KN P T I L D + E A E+ N ++ G P + L+ G
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404
Query: 219 LGRLSDVRRFAEEMLNRRI 237
+ D R +M++ +
Sbjct: 405 AEKFDDALRMKNKMMSSKC 423
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 150 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 207
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 208 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 265
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ PD +TYN + L K + + + EM +P + T I
Sbjct: 266 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCK 325
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 326 EGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 116 LKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 173
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 174 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 233
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 234 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 293
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 294 LKQAHHLIDEM 304
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 171 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 228
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + M+ P + T I L
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + D
Sbjct: 289 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDD 348
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 349 VAYTALISGLCQEGRSV 365
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/229 (17%), Positives = 90/229 (39%), Gaps = 2/229 (0%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A+ F ++E + + + + + + +A++ R+ + +
Sbjct: 49 SASAVFAAILETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRK 108
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L+ L+KL + ++ G+ +L +N ++ C + D+ FD +
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYP--ASLYFFNILMHRFCKDGDIRVAQSVFDAITK 166
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P ++YN + I+ + E M+ + QP + I L + +
Sbjct: 167 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDD 226
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A E+++ +L G++P + L+ G GR+ + ML++ +L
Sbjct: 227 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLL 275
>gi|359490245|ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Vitis vinifera]
Length = 1101
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+A+ F+ L + D AL F+ M C P L +++ + L + L D+
Sbjct: 480 VAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDL 539
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G ++P+L Y +V CN+ D+ + F DQM G P Y+ I CL +
Sbjct: 540 MQENG--IVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRR 597
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K++ E EN F M++ P + T I+ A ++++ ++E+G P S
Sbjct: 598 KRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSY 657
Query: 210 NVLLVGL 216
++ GL
Sbjct: 658 TAVISGL 664
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + R + +A +M+ E P F+ ++ + + H + L++ M
Sbjct: 808 YNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMN 867
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G L P+ I YNA++ LC + + M G FP+ +Y + +CL +
Sbjct: 868 ADG--LAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCASHL 925
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
F EM+ +++ P NC + +L + A +++ +L+ P E + +
Sbjct: 926 GVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRKYPDELTKRL 985
Query: 212 LL 213
L+
Sbjct: 986 LV 987
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + + L + + V++A + +M+ P L + + D L D M
Sbjct: 516 TYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQM 575
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L P++ +Y++++G L + F M+ G PD++ Y + KN+
Sbjct: 576 NERG--LKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNR 633
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ E F +MI++ +QP+ + I+ L+ + + + +L++G +P
Sbjct: 634 RAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVP 687
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 54/120 (45%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + MPNL +YN ++ C N + + + F+ M G P+ +T+ ++ + ++
Sbjct: 798 GSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEID 857
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F++M + P + I L A A+ + + + + G+ P ++S LL
Sbjct: 858 HAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLL 917
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 2/203 (0%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
AL ++ +KG + P L ++ + + N +++M G + PN + + +
Sbjct: 789 ALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEG--VCPNQVTFTIL 846
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ ++D+ F++M G PD +TYN + + L K ++ + + H M K
Sbjct: 847 INGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGL 906
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
P + + L + A +I+ +L + +P + N LL L R +
Sbjct: 907 FPNKSSYEKLLKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHI 966
Query: 228 FAEEMLNRRILIYDVTMQKLKKA 250
+ ML +R ++T + L +A
Sbjct: 967 VFDVMLKQRKYPDELTKRLLVEA 989
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 34/234 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+V EA F M ER P + Y+T L R ++V+EA F+ M+ E
Sbjct: 207 GLCDKGHVDEAFYMFDTMRERTGL-PATIHLYKTLFYGLCRQERVEEAELFVGEMESEGH 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-------------------------- 94
F +++ + + ++++ M+ +G
Sbjct: 266 FIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWI 325
Query: 95 -------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ L PN++ Y+ ++ C VD M P +Y ++ L
Sbjct: 326 LHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALY 385
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
K ++ EVE + +M+ P + T + E A++I I +NG
Sbjct: 386 KENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNG 439
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 16/152 (10%)
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
A D V++ND + LW +N ++ LC+ VD F FD M
Sbjct: 182 AFDYFVRINDVGILMGLW---------------CFNRLIDGLCDKGHVDEAFYMFDTMRE 226
Query: 130 HGAFPDSL-TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
P ++ Y +F L + ++V E E F EM + + I +
Sbjct: 227 RTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMR 286
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A+ ++ +L+ G P + N L+ G LG
Sbjct: 287 TAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLG 318
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V+EA + F EMV R +P+ ++ Y + + L ++DEA + +M + CFP
Sbjct: 272 KNGKVLEAKEIFEEMV-RMSIDPD-IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++L+ M G L+ N + YN ++ DVD F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQRG--LVNNTVTYNTLIQGFFQVGDVDKAQEF 387
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM G PD TYN++ L N + + F +M K+E + T I +
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCK 447
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A ++ + G+ P + ++ GL G +V +M
Sbjct: 448 TGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM 496
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V +A +MVE + P+ ++AY + +L + ++V++AL F + + +
Sbjct: 164 GFCRRNRVSDAVSLVDKMVE-IGYRPD-IVAYNAIIDSLCKTRRVNDALDFFKEIGRKG- 220
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ PN++ Y A+V LCN+ ++
Sbjct: 221 ------------------------------------IRPNVVTYTALVNGLCNSGRWNDA 244
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R M+ P+ +TY+ + + +KN KV E + F EM++ P + ++ I
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + A ++++ ++ G P S N L+ G R+ D + +M R ++
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 241 DVTMQKLKKAFYN 253
VT L + F+
Sbjct: 365 TVTYNTLIQGFFQ 377
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + L + ++A + LR M P + +S LD VK +++
Sbjct: 224 NVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIF 283
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV + + P+++ Y++++ LC ++ +D + FD MV G FPD ++YN +
Sbjct: 284 EEMVRMSID--PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFC 341
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+V + F +M + + T I + + A E ++ + G+ P
Sbjct: 342 KAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIW 401
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ N+LL GL + G L E+M ++ I+ Y +Q + K
Sbjct: 402 TYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 12/224 (5%)
Query: 38 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG--- 94
T +R ++ +A+ R M FP++ F+ L +VK+ +D+++ +G
Sbjct: 59 TRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKK-------YDVVISLGKKM 111
Query: 95 --FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ +L +N V+ C V +M+ G PD +T + + +V
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ + +M++ ++P + I L A++ + I GI P + L
Sbjct: 172 SDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTAL 231
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ GL N GR +D R +M+ R+I +T L AF +
Sbjct: 232 VNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M + P L F+ +D VK +L+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + P++ YN++V C ++ +D + F+ MV FPD +TYN + +
Sbjct: 354 DDMIKRSID--PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+K+V + F EM + T I L + + A +++ ++ +G+ P
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
+ ++LL GL N G+L + M + I IY ++ + KA
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG VEA K + +M++R +P+ + Y + + ++D+A + M ++CFP
Sbjct: 342 KEGKFVEAEKLYDDMIKR-SIDPD-IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K +L+ M G L+ + + Y ++ L ++ D DN +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G PD +TY+++ + L N K+ + F M K+E + T I +
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A + + +++ + G+ P + N ++ GL
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ +A+ + M P F+ + L N ++
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G PNL+ Y VV LC D D ++M D + +N I
Sbjct: 209 AVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + V + N F EM +P + ++ I+ L A ++ + ++E I
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+ + + ++M+ R I T L F M DR
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF-----CMHDRL 381
Query: 263 DSLERRWK 270
D ++ ++
Sbjct: 382 DKAKQMFE 389
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV+R P +++ Y + L + D AL L M+ + F+
Sbjct: 208 EAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L+ M G + PN++ Y++++ LC+ + + M+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + +K K E E + +MIK P + + D +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ P + N L+ G R+ D EM +R ++ VT L +
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 250 AFYNES 255
+++
Sbjct: 444 GLFHDG 449
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+ A K F +MV + P ++ Y L L ++++AL+ M+
Sbjct: 444 GLFHDGDCDNAQKVFKQMVS--DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ ++ + K + WD+ + + PN++ YN ++ LC+ +
Sbjct: 502 KLDIYIYTTMIEGMCK---AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ +M G P+S TYN + +++ EM
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 11/194 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K V + + F EM R + Y T + L D A K + M +
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S LD L ++++D M L ++ +Y ++ +C VD+
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL--DIYIYTTMIEGMCKAGKVDDG 524
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + G P+ +TYN + L + + E +M E P P N T T+
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLP-NSGTYNTL 581
Query: 181 ----LLDADEPEFA 190
L D D+ A
Sbjct: 582 IRAHLRDGDKAASA 595
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL----MPNLIMYNAVVGLLCNNN 115
C+ F S + D L + H ++L D + G + +P+++ +N ++ +
Sbjct: 40 CYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK 99
Query: 116 DVDNVFRFFDQM----VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
D V ++M + HG + TYN++ C + ++ +M+K ++P+
Sbjct: 100 KFDVVISLGEKMQRLEIVHGLY----TYNILINCFCRRSQISLALALLGKMMKLGYEPSI 155
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ ++ + A+ + + ++E G P + L+ GL + S+ +
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 232 MLNR----RILIYDVTMQKLKK 249
M+ R ++ Y V + L K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCK 237
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ + T+ EM+++ +P +V+ Y + + L + + VD+A++ L M
Sbjct: 21 GFFKEGDLDKTYSTYNEMLDK-RISP-NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 78
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + + M G P+++ YN+++ LC N
Sbjct: 79 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE--PDVVTYNSLMDYLCKNGRCTEA 136
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G PD TY + + + E+ M++N P + +
Sbjct: 137 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 196
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ E A+ +++ + + G+ P + ++ L GR+ D + E+M++
Sbjct: 197 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 250
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K F M +R P+ + Y T L + E L +M P
Sbjct: 129 KNGRCTEARKIFDSMTKR-GLKPD-ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 186
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
FS + K + ++ M G N PN + Y V+ +LC + V++ +
Sbjct: 187 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLN--PNAVTYGTVIDVLCKSGRVEDAMLY 244
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
F+QM+ G PDS+ YN + L K + E F EM+
Sbjct: 245 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 284
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G + P+++ Y+ V+ D+D + +++M+ P+ +TYN I L K
Sbjct: 1 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKA 60
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ V + M+K+ P + + + + +P+ AI + +G+ P +
Sbjct: 61 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 120
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
N L+ L GR ++ R+ + M +R L D+T
Sbjct: 121 NSLMDYLCKNGRCTEARKIFDSM-TKRGLKPDIT 153
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P H + + + + ++V+EA+ M+ +
Sbjct: 161 GYATKGALVEMHGLLDLMV-RNGIHPNHYV-FSILVCAYAKQEKVEEAMLVFSKMRQQGL 218
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D+L K + ++ M+ G L P+ I+YN+++ LC + +
Sbjct: 219 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG--LRPDSIVYNSLIHSLCIFDKWEKA 276
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F +M+ G ++ +N I + K +V E F M++ +P
Sbjct: 277 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKP 325
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 33 ETFLITLIR-----GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++ LI L++ GK VD FL++ K P+L+ +++ +D L+K + L+
Sbjct: 752 DSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF 811
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G P++ YN + L + + +F +++M+F G P+++T+N++ L+
Sbjct: 812 YKMKNAGCT--PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLV 869
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ + + + +++++ ++ PTP I LL E A + + +L+ G +P
Sbjct: 870 KSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
N+L+ G G+ DV E L RR++
Sbjct: 930 LYNILMNG---FGKQGDVETACE--LFRRMV 955
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G V +A K EM E +PE V+ + + TL + +VDEA K + MK
Sbjct: 517 YGKAGRVDDAIKLLSEMEEN-GCDPE-VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLA 574
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ ++ L L K L+ M I + PN I +N ++ LC N +VD
Sbjct: 575 PTVVTYNTLLAGLGKEGRVQEATALFKGM--IADDCPPNTISFNTLLDCLCKNGEVDLAL 632
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ +M FPD LTYN + LIK +V+ FH+M K
Sbjct: 633 KMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK 675
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 4 KEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G V EA FG + V + + ++ Y T + L+R ++DEAL+ M+
Sbjct: 379 KVGKVDEA---FGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLET 435
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T + +D K +S ++ ++ M G ++PN++ NA + L ++
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNG--IVPNIVACNASLYSLAEQGRLEEAKE 493
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
FF+ + G PD++TYN++ C K +V + EM +N P + + I L
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
AD + A +++ + E + P + N LL GL GR+ + + M+
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 19/280 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V+A F ++ + F P + AY + + L++ + + A MK C P
Sbjct: 764 KHGKAVDAYNVFLKLTKSFCITPS-LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPD 822
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ LD L K L++ M+ G PN I +N V+ L +N +D
Sbjct: 823 VFTYNLFLDALGKSGKIKELFDLYEEMLFRGCK--PNTITHNIVIFGLVKSNSLDKAIDL 880
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ ++ P TY + + L+K ++ E + FF EM+ P NC +L++
Sbjct: 881 YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMP---NCPL-YNILMN 936
Query: 184 A----DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
+ E A E++ +++ GI P S ++++ L +G++ D + EE+ L+
Sbjct: 937 GFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDP 996
Query: 236 RILIYDVTMQKLKKA-FYNESRSMRDRFDSLERRWKTSQM 274
++ Y++ + L ++ E+ S+ FD + R T +
Sbjct: 997 DLVCYNLMINGLGRSQRVEEALSL---FDEMRNRGITPDL 1033
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L++ EALK R M E P+LK +S + L K D + L M
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN+ + + +L +D + +M G PD +TY ++ + L
Sbjct: 254 ESLG--LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAG 311
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K++ + F +M + +P + T + D + + E W+ + +G LP +
Sbjct: 312 KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371
Query: 211 VLLVGLRNLGRLSDV 225
+L+ L +G++ +
Sbjct: 372 ILIDALCKVGKVDEA 386
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L++ +++EA +F M C P ++ ++ K D +L+ M
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V G + P+L Y+ +V LC VD+ +F+++ G PD + YN++ L +++
Sbjct: 955 VKEG--IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+V E + F EM P I L A E A +++ + G+ P + N
Sbjct: 1013 RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYN 1072
Query: 211 VLLVG 215
L+ G
Sbjct: 1073 ALIRG 1077
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 4/222 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K + MV E + Y ++ L + + ++ + L+ M+ P
Sbjct: 204 KSGFCREALKVYRRMVS--EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPN 261
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ + IL + + M G P+++ Y ++ LCN ++N
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCG--PDVVTYTVLIDALCNAGKLNNAKEL 319
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M PD +TY + + + + ++ F+ EM + + P + I L
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ + A + + + G+ P + N L+ GL L RL +
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 44/259 (16%)
Query: 34 TFLIT---LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
TF I L R ++DEA L+ M C P + ++ +D L + +L+ M
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
P+ + Y ++ ++ D+D + F+ +M G PD +T+ ++ + L K
Sbjct: 324 KASSHK--PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN-------------YI 197
KV E M K P T I LL + + A+E++N YI
Sbjct: 382 KVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYI 441
Query: 198 L----------------------ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM--- 232
L NGI+P + N L L GRL + + F +
Sbjct: 442 LFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC 501
Query: 233 -LNRRILIYDVTMQKLKKA 250
L + Y++ M+ KA
Sbjct: 502 GLAPDAITYNILMRCYGKA 520
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 148 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 172 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 292 LKQAHDLIDEM 302
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 59/138 (42%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 135 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 194
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254
Query: 220 GRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 255 GRVDLAMEIYKQMLSQSL 272
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 4/250 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA F + R + E V+ Y + +R + EA++ M
Sbjct: 490 GLFKNGNISEARNYF-DTWTRMDL-MEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ + D ++ +++ G L+P+++ Y ++ C ++ +
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG--LVPSVVTYTTLMNAYCEVGNMQEM 605
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F +M + P +TY ++ + L + K+HE M P + T I
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A++++N +L + P + + VL+ L G L DV R + +R I +
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Query: 241 DVTMQKLKKA 250
VT + KA
Sbjct: 726 KVTYMTIIKA 735
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 4/242 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
NP+ ++ Y T + + ++EALK + + F++ L L K+ +
Sbjct: 373 NPD-LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M + L P+ I+Y+ ++ LC V ++ ++QM FP +
Sbjct: 432 TLFDEMETL--RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L KN + E N+F + + + I + D A++++ ++E GI P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDS 264
+ N L+ G G L + R+ E + + ++ VT L A Y E +M++ F
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA-YCEVGNMQEMFHF 608
Query: 265 LE 266
L
Sbjct: 609 LH 610
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 11/183 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT---LKFFSNALDILVKLNDSTH 82
P+ V Y T + +GK++ +AL+ +M NC PT K NAL I L D
Sbjct: 654 PDSV-TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712
Query: 83 -TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
V + D N+ + Y ++ C V +F+QM+ G Y+
Sbjct: 713 MVVSIED------RNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSA 766
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L K + E + FF M+ P P C T + E ++++G
Sbjct: 767 VINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826
Query: 202 ILP 204
+
Sbjct: 827 FIS 829
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 2/198 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y L L +DEAL F M+ P + ++ + L + ++ M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ G N P+L+ Y ++ C +++ + + + G + + YNM+ CL K
Sbjct: 368 LLQGLN--PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG 425
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E F EM +P + + I L + A +++ + P +
Sbjct: 426 RIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 211 VLLVGLRNLGRLSDVRRF 228
+L+GL G +S+ R +
Sbjct: 486 AVLLGLFKNGNISEARNY 503
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ N ++ C +D FF MV +G DS +YN++ L + E F
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M K+ +P + T L A ++ +L G+ P + L+ G
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+G + + + +E L+R KL FYN
Sbjct: 389 MGNIEEALKLRQETLSRGF--------KLNVIFYN 415
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+ + YN ++ LC +D F D M HG PD +TYN + + + +
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+M+ P + T I E A+++ L G N+LL
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420
Query: 216 LRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKL-KKAFYNESRSMRDRFDSLERRW 269
L +GR+ + +EM R+ ++Y + + L K+ F + + ++ L+R++
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM-RLKRKF 478
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 39/291 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA F EM ER P ++ T ++ L + ++D+A + M+ +
Sbjct: 124 GLCKSGRVEEALLLFNEM-ERLGCTPNR-RSHNTIILGLCQQSKIDQACQVFHEMEARDI 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLL-------- 111
P + +D L K +L+ M+ G + P+ + YN V+ G+
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG--ITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 112 --------------------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
C +D FR +M G PD +TY+ +
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +V + + +M+K + +PT + T I L A + A E+ + ++ +G P
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ G G+ R +M+ R + VT L +R
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F M++ P V Y + + +DEAL+ + M+ + C
Sbjct: 194 GLAKAGKLNEAYKLFRRMLDS-GITPSAV-TYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ F+ +D K +L M G +P+++ Y+ ++ LC+ VD+
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGH--VPDVVTYSTLISGLCSIARVDDA 309
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV P +T N + L K ++ E M+ + P + T +
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A + E A E+ + ++ G+ P + L+ GL RL +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A F +++ P V AY + + L D+A + M C
Sbjct: 19 GLAKAGKLNDARDLFQKLLHS-GVTPSTV-AYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ +D K L M+ G +P+++ YN V+ LC + V+
Sbjct: 77 PPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVMDGLCKSGRVEEA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G P+ ++N I L + K+ + FHEM + P + I
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A + A +++ +L++GI P + NV++ G+
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 4/225 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F +M R P + Y + + ++EA ++ M + P + ++
Sbjct: 63 DARELFADMNRR--GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + L++ M +G PN +N ++ LC + +D + F +M
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCT--PNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PDS +Y ++ + L K K++E F M+ + P+ + I + A +
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A+E++ + G P + N+L+ G++ + R + M +
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 9/222 (4%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNL 97
RGK +DEA + L+ M + P + +S + L + +++D+ H L + MV
Sbjct: 268 RGK-MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH---LLEDMVK--RQC 321
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P ++ N ++ LC + D MV G PD +TYN + + +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+M+ P + ++ L A+ A ++ + +G P + L++G
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+ G++ + EM+ I V L RS R
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + YN ++ C ++ +M+ G PD +TYN + + L K+ +V E
Sbjct: 78 PSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLL 137
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F+EM + P + T I L + + A ++++ + I P S +L+ GL
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVT 243
G+L++ + ML+ I VT
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVT 222
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
KLND+ Q + + P+ + Y +++ LC N D+ F M G P
Sbjct: 25 KLNDARDLFQKL-----LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TYN+I + K + E + +MI++ P + T + L + E A+ ++N
Sbjct: 80 PVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFN 139
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
+ G P S N +++GL ++ + EM R I Y + + L KA
Sbjct: 140 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + + +VD AL+ L++M+ + C P +++ + LVK + L
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G ++PN+I Y ++ C+ +D DN FR F+ M +G PD Y ++ + L
Sbjct: 521 TKMQKDG--IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E +F +++ T + T I A +FA + +++ G P
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ +VLL L RL++ ++M R I
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
++ D+AL+ M C L+ F ++ L+K + +L + + G L+PN+
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG--LVPNV 462
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
I Y +++ C + VD M G P++ TYN + L+K+KK+H+ +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M K+ P + T + D + + A ++ + +NG+ P E + VL L GR
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582
Query: 222 LSDVRRF 228
+ F
Sbjct: 583 AEEAYSF 589
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L K V EAL +MK + C P ++ F+ + L K L+D M
Sbjct: 255 SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++P+++ YNA++ +++ + + M +G PD TYN + L ++
Sbjct: 315 PQNG--VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQ 371
Query: 151 KVHEVENFFHEMIKNEWQPT 170
K E E + +K + PT
Sbjct: 372 KTEEAEELLNNAVKEGFTPT 391
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 17 EMVERFEWNP-EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
EM+E+ P EH AY L + + +EA F+ V KG T +++ +D
Sbjct: 556 EMMEQNGLKPDEH--AYAVLTDALCKAGRAEEAYSFI-VRKGVA--LTKVYYTTLIDGFS 610
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ L + M+ G P+ Y+ ++ LC ++ DQM G
Sbjct: 611 KAGNTDFAATLIERMIDEGCT--PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE-IW 194
Y ++ + +++ K + ++EM + +P+ AT T+ +++ E +E
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS----ATTYTVFINSYCKEGRLEDAE 724
Query: 195 NYILE---NGILPLEASANVLLVGLRNLG 220
+ IL+ G+ P + N+L+ G ++G
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 104/270 (38%), Gaps = 53/270 (19%)
Query: 32 YETFLITLIRGKQVDE-------ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
YE +++++ E A++ +R + K ++ AL L + + + +
Sbjct: 109 YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMG 168
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT------ 138
+++ +V G L+P+ + YN ++ C D+ R F ++ G P++ T
Sbjct: 169 RVYSQLVQDG--LLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVL 226
Query: 139 -----------------------------YNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
Y ++ + L + K V E F M ++ P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSP 286
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
I+ L + A +++ + +NG++P + N ++VG LGR++D +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 230 EEMLNR---------RILIYDVTMQKLKKA 250
E M LIY + QK ++A
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 376
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A F M + V+ Y ++ + ++++ALK +M+ C
Sbjct: 297 GLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 354
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + N L + + +L + V GF P ++ + ++ C D+
Sbjct: 355 HPD-DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFT--PTVVTFTNLINGYCMAEKFDDA 411
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R ++M+ D + + LIK ++ E + +E+ N P + + I
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ + + A+E+ + +G P + N L+ GL
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 31/236 (13%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + +A +M ER P+ V+ Y + +D A L+ M G +C
Sbjct: 714 YCKEGRLEDAEDLILKM-EREGVAPD-VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 771
Query: 62 PTLKFFSNALDILVKLN----DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + L L+K N S T +W+++ ++
Sbjct: 772 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI-------------------------EL 806
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++ ++MV HG P TY+ + K ++ E M P
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I D E A+ + + E G P S +L+VGL N G V+ ++L
Sbjct: 867 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+ + ++ LC + V + FD M +G P +TYN + K ++++
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M KN P T I L D + E A E+ N ++ G P + L+ G
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404
Query: 219 LGRLSDVRRFAEEMLNRRI 237
+ D R +M++ +
Sbjct: 405 AEKFDDALRMKNKMMSSKC 423
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 4/241 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G EM++R P+ V + T + IR ++DEA+K +V+ +
Sbjct: 455 GLCKNGRFPAMKLLLSEMLDR-NVQPD-VYVFATLMDGFIRNGELDEAIKIFKVIIRKGV 512
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K T + + M + + P+ Y+ V+ +D+ +
Sbjct: 513 DPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNV--HHAPDEYTYSTVIDGYVKQHDMSSA 570
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F QM+ H P+ +TY + K + E F M + P + T +
Sbjct: 571 LKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGG 630
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A +PE A I+ +L NG P +A+ + L+ GL N + + M N R LI
Sbjct: 631 FFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLIL 690
Query: 241 D 241
D
Sbjct: 691 D 691
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V +A +T M E P+ + Y T + +G ++ EA +FL K P
Sbjct: 318 KYGLVTKAAETMRRMAE-MGCGPD-ITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPN 375
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K D + + IG P+L+ Y A + + + ++D
Sbjct: 376 KFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK--PDLVSYGAFIHGVVVHGEIDVALMV 433
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M+ G FPD+ YN++ L KN + ++ EM+ QP AT + +
Sbjct: 434 REKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIR 493
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E + AI+I+ I+ G+ P N ++ G G+++D +M N
Sbjct: 494 NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKN 544
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 92/237 (38%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ A +T E+ + + V Y + + + + + L M
Sbjct: 245 GYCKKGDLQCATRTLKEL--KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 302
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+K F+N +D K T + M +G P++ YN ++ C +
Sbjct: 303 NMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCG--PDITTYNTMINFSCKGGRIKEA 360
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ G P+ +Y + K + + + +P ++ I
Sbjct: 361 DEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ E + A+ + ++E G+ P NVL+ GL GR ++ EML+R +
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNV 477
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ +++ A K F M + F+ P +V+ Y T + + + ++A +M C
Sbjct: 595 GFCKKADMIRAEKVFRGM-KSFDLVP-NVVTYTTLVGGFFKAGKPEKATSIFELMLMNGC 652
Query: 61 FP---TLKFFSNALD------ILVKLNDS-----THTVQLWDIMVGIGFNLMPNLIMYNA 106
P T + N L +L++ DS + + + +M+ G++ + + YN+
Sbjct: 653 PPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQV--IAAYNS 710
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
V+ LC + VD +M+ G DS+ + + L K E N +I +
Sbjct: 711 VIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRN----IISCD 766
Query: 167 WQPTPLNCATAITMLLD 183
L A ++ LD
Sbjct: 767 LNKIELQTAVKYSLTLD 783
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 20/265 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R V+ Y + ++ KQV +A M C P
Sbjct: 335 KAGLIEQAQWLFEEM--RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIG--------------FNLMPNLIMYNAVVG 109
+ +D L K + + +++ ++G L PN++ Y A+V
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + VD+ D M+ G P+ + Y+ + + K K+ + F +M K + P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR----LSDV 225
+ + I + + A+++ + +L++ P + ++ GL +G L +
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKA 250
E+ + ++ Y + L KA
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKA 597
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + +D L K + H +L D M+ G PN I+Y+A++ C +D+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE--PNHIVYDALIDGFCKAGKIDSAQ 499
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F QM G P TY + + + K+ ++ +M+K+ P + I L
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
E E A+++ + + E G P + L+ GL G++
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F +M + + P V Y + + + + ++D A+K L M ++C
Sbjct: 488 GFCKAGKIDSAQEVFLQMT-KCGYLPS-VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 545
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L ++ +S ++L +M G + PN++ Y A++ L +D
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS--PNVVTYTALIDGLGKAGKIDLS 603
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM G P+ +TY ++ L + + EM + W AI
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663
Query: 181 LLDADEPEFAI--EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ I E+ +Y G +P+ +L+ GRL +EM+
Sbjct: 664 FSKSFIASLGILEEMESY----GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D A K M NC +N L + QL M+ GF +P+ Y
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF--VPDTSTY 291
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ V+ LC+ V+ F F +M G PD TY ++ + K + + + F EM
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
PT + I L A + A +I++ +++ G P + + L+ GL G +S
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 17 EMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
+M+ER ++ + VL T +I+ L+ DEA+ FL M+ +C P + + L +
Sbjct: 96 DMIEREDFKLDTVLC--THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ ++M+ G N PN ++N++V CN D ++ ++M G P
Sbjct: 154 KKKQLGWCKRIINMMMTEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 136 SLTYNMIFECLIKNKKVHE------VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+ YN+ + +K+ E + EM+ +N A L + +
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271
Query: 190 AIEIWNYILENGILP 204
A ++ ++ G +P
Sbjct: 272 AFQLIKEMMRKGFVP 286
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 20/269 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVER---------FEWNPEHVLA-----YETFLITLIRGKQVD 46
G K GN+ +A + + +++ F H LA Y + L + +VD
Sbjct: 402 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 461
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
A + L M C P + +D K +++ M G+ +P++ Y +
Sbjct: 462 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY--LPSVHTYTS 519
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ + + +D + QM+ P+ +TY + + L + + + M +
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + I L A + + +++++ + G P + VL+ L G L R
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Query: 227 RFAEEMLN----RRILIYDVTMQKLKKAF 251
EM + + Y +Q K+F
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 74/189 (39%), Gaps = 6/189 (3%)
Query: 11 ANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A K +GEM+ N +V F L + D+A + ++ M + P +S
Sbjct: 237 AEKIYGEMLAANCVLNKVNV---ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L L+ M +G + P++ Y ++ C ++ F++M
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVG--VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 351
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P +TY + +K K+V + + FH M+ +P + + L A
Sbjct: 352 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411
Query: 190 AIEIWNYIL 198
A E++ ++
Sbjct: 412 AFEVYAKLI 420
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDGANGLFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQAHDLIDEM 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDGAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 293 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A +++ +L G++P + L+ G
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 260 NGRVDLAMEIYKQMLSQSLL 279
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLIRG ++ EAL M GE P + + ++ L K+ +++ ++L MV
Sbjct: 136 TLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ- 194
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
N PN+ YN ++ LC + V F F +MV G PD TYN + L +
Sbjct: 195 -KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
V +EM+ ++ P ++ T + L + A ++ + +++ G+ P + L+
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
G L + + + + M+ +
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCK 335
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 33/280 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN A + G MV++ P +V AY T + +L + +QV EA M +
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQK-NCQP-NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 232
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L L + H L + MV +MP+++ +N VV LC V
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVD--SKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
D+M+ G P+ +TY + + CL+ ++ E F M+ P ++ T I
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLL--SEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Query: 179 ---------------TMLLDA-------DEPEFAIEIWNYILENGILPLEASANVLLVGL 216
T L+D DE A+++++ ++ G +P S N L+ G
Sbjct: 349 NGYCKIQRIDKAIHYTXLMDXXCCYLNMDE---AVKVFDTMVCKGCMPNVISYNTLINGY 405
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ R+ EM + ++ VT L + R
Sbjct: 406 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L+D M+G GF P+++ Y ++ LC + R MV P+ YN I
Sbjct: 150 ALHLFDKMIGEGFR--PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K+++V E N F EM+ P + I L + E + + N ++++ I
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+P S N ++ L G++++ ++M+ R +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG V EA+ +M++R E N V+ Y + ++DEA+K M + C P
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPN---VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339
Query: 63 TLKFFSNALDILVKL---NDSTH----------------TVQLWDIMVGIGFNLMPNLIM 103
+ ++ ++ K+ + + H V+++D MV G MPN+I
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG--CMPNVIS 397
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN ++ C +D F +M PD++TY+ + L +++ + FHEM+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457
Query: 164 KNEWQP 169
P
Sbjct: 458 ACSQIP 463
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 61/158 (38%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + ++ +C + FD+M+ G PD +TY + L K
Sbjct: 129 PDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M++ QP T I L + A +++ ++ GI P + N L+ L N
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L V EM++ +I+ V+ + A E +
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 7/217 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A FGEM R E P+ V Y T + L +++ +A+ M +
Sbjct: 404 GYCKIQRIDKAMYLFGEMC-RQELIPDTV-TYSTLIHGLCHVERLQDAIALFHEMVACSQ 461
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + LD L K + + + ++ I G NL P++ + N + +C +++
Sbjct: 462 IPNLVTYRILLDYLCK---NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 518
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + G PD TY+++ L + + E F EM +N T
Sbjct: 519 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 578
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L +E AI++ ++ G +AS L V +
Sbjct: 579 GFLRNNETSRAIQLLQEMVARG-FSADASTMTLFVKM 614
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A F EMV + +++ Y L L + + + EA+ L+ ++G N P ++ +
Sbjct: 448 DAIALFHEMVACSQI--PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
A+D + + + L+ + G L P++ Y+ ++ LC +D + F +M
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKG--LQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 563
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+G + YN I ++N + EM+ + A+ +T+ + +
Sbjct: 564 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD----ASTMTLFVKMLSDDG 619
Query: 190 AIEIWNYILENG 201
+ IL NG
Sbjct: 620 LDQSLKQILRNG 631
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 60/144 (41%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
F + PN+ + ++ C+ N V F +++ G PD+ T+ + + K+
Sbjct: 89 SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIG 148
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + F +MI ++P + T I L AI + +++ P + N ++
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
L ++++ EM+ + I
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGI 232
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 17/253 (6%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV A F EM R ++ V Y + L + ++DEA F M+ E C P
Sbjct: 276 NVHGALGLFEEM--RHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVL 333
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFD 125
+N ++ L K ++L++ M + +P+++ YN ++ L + + V + +F+
Sbjct: 334 MNNMINFLGKAGRLDDAIKLFEEMETL--RCIPSVVTYNTIIKALFESKSRVSEISSWFE 391
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M G P TY+++ + K + + EM + + P P + I L A
Sbjct: 392 RMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 451
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEMLNR-----RI 237
+ A E++ + EN +SA V V +++L GRL D +EM NR +
Sbjct: 452 RYDLANELFQELKENC---GSSSARVYAVMIKHLGKAGRLDDAVDLFDEM-NRLGCTPNV 507
Query: 238 LIYDVTMQKLKKA 250
Y+ M L +A
Sbjct: 508 YAYNALMSGLARA 520
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 5/268 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLA---YETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
VVE +M++ NP V+ + L K + +A+ +K C PT
Sbjct: 131 VVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTA 190
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+++ + +L+ + +L++ M G P+ + Y+A++ C D+
Sbjct: 191 HAYNSMIIMLMHEGEYEKVHELYNEMSNEG-QCFPDTVTYSALISAFCKLGRQDSAIWLL 249
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M +G P + Y M+ L K VH F EM +P I L A
Sbjct: 250 NEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKA 309
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ A ++ + G P N ++ L GRL D + EEM R + VT
Sbjct: 310 GRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTY 369
Query: 245 QKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ KA + ES+S S R K S
Sbjct: 370 NTIIKALF-ESKSRVSEISSWFERMKGS 396
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R P +V AY + L R +DEAL +R M+ C P
Sbjct: 484 KAGRLDDAVDLFDEM-NRLGCTP-NVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPD 541
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K + + M P+ + YN V+G L + + +
Sbjct: 542 INSYNIILNALAKTGGPDRAMGMLCNMKQSAIK--PDAVSYNTVLGALSHAGMFEEAAKL 599
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 600 MKEMNAIGFDYDLITYSSILEAIGK 624
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC-FPTLKFFSNALDILVKLNDSTHTV 84
P AY + + L + K+ D A + + +K ENC + + ++ + L K V
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDLANELFQELK-ENCGSSSARVYAVMIKHLGKAGRLDDAV 492
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M +G PN+ YNA++ L +D +M HG PD +YN+I
Sbjct: 493 DLFDEMNRLGCT--PNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILN 550
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
L K M ++ +P ++ T + L A
Sbjct: 551 ALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHA 590
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+PN++ YN+++ LC N VD+ ++M G PD TYN + + L K +V E
Sbjct: 64 LPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANR 123
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F EM P + + I D A +++ +L+ LP + L+ G
Sbjct: 124 LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 183
Query: 218 NLGRLSDVRRFAEEML 233
N G + D R EEM+
Sbjct: 184 NAGLVDDAERLLEEMV 199
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+GN+ A + F EM ++ N +++ Y + + L VD L + M C P +
Sbjct: 46 QGNLTGAIRVFHEMPDK---NLPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDI 102
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ +D L K +L+ M N P++I Y+ ++G C + ++ F
Sbjct: 103 NTYNTLIDGLCKTGRVPEANRLFGEMKAKFCN--PDVITYSCLIGGFCKLDRINMACTLF 160
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D M+ A PD +T+ + E V + E EM+ ++ P
Sbjct: 161 DDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSP 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 17/235 (7%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L + +V EA + MK + C P + +S + KL+ L+D M+
Sbjct: 105 YNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDML 164
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+P+++ + +V CN VD+ R ++MV PD TY + + K K+
Sbjct: 165 KQAA--LPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKR 222
Query: 152 VHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDA----DEPEFAIEIWNYILENGILP 204
+ E M K NC A M++D A+E+ I ++G P
Sbjct: 223 MVEAHRVLKRMAKGGSNK---NCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPP 279
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM-LNRR----ILIYDVTMQKLKKAFYNE 254
L+ GL L EEM L+R+ Y +Q+L + +E
Sbjct: 280 RHDIYVALIRGLCQGKELRKAMEVLEEMTLSRKGRPNAKAYKAVIQELAREGRHE 334
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E + EA G+M + F P++V +Y T L L + +++EA L MK FP
Sbjct: 61 ENKLSEAIGLIGKM-KHFSCFPDNV-SYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + KL ++ DIM N++P++ Y ++G LC + +D FR
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMAR--NNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176
Query: 125 DQMVFHGAFPDSLTYNMI----FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M P +TYNM+ FEC K ++ EM +P + +
Sbjct: 177 DEMENLKLLPHVVTYNMLINGCFECSSSLKGFELID----EMEGKGVKPNAVTYNVVVKW 232
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + A + E+G P + N L G GRLS+ R +EM + + +
Sbjct: 233 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMN 292
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
VT+ + E R + D + L K
Sbjct: 293 SVTLNTILHTLCGE-RKLDDAYKLLSSASK 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 10/238 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G + EA + EM + + N + T L TL +++D+A K L
Sbjct: 267 GYCKAGRLSEAFRMMDEMSRKGLKMNS---VTLNTILHTLCGERKLDDAYKLLSSASKRG 323
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F + + K+ S WD M ++P++I Y ++G LC + D
Sbjct: 324 YFVDEVSYGTLIMGYFKVGKSXX----WDEMKEK--EIIPSIITYGTMIGGLCRSGKTDQ 377
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++++ G PD TYN I + +V + +F ++M+K ++P C +
Sbjct: 378 SIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVR 437
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L + A++++ + G + N ++ GL GR + EM +++
Sbjct: 438 GLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+N ++ C N + +M FPD+++YN I + L K K++E + +M
Sbjct: 51 FNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 110
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
N P ++ + A E+ + + N +LP + L+ GL G++
Sbjct: 111 NNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKID 170
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+ R +EM N ++L + VT L + S S++
Sbjct: 171 EAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLK 206
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 2/222 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y T + L + ++DEA + M+ P + ++ ++ + + S +L D
Sbjct: 153 VRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELID 212
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G + PN + YN VV +DN +M G PD +T+N + K
Sbjct: 213 EMEGKG--VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCK 270
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E EM + + + T + L + + A ++ + + G E S
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
L++G +G+ E+ + I+ Y + L ++
Sbjct: 331 YGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRS 372
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 8/254 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ V EA F E+ + P+ V Y + L Q +EA M N
Sbjct: 233 GLCKDRLVSEALDIFSEIKGK-GVRPD-VFTYSILMHGLCNSDQKEEASALFNEMMSLNI 290
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D L K + + IM+ G PN YN+++ C N V
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE--PNYATYNSLMNGYCLQNKVFEA 348
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD M+ G P+ ++YN++ K +++ E F EM P N T I+
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L A A E++ + G P + +LL L LG L + R M L
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468
Query: 237 ILIYDVTMQKLKKA 250
++ YD+ ++ + K+
Sbjct: 469 LVTYDILIRAMYKS 482
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G A +M ++ P+ V+ Y T + L + + V EAL +KG+
Sbjct: 198 GFCKIGKTTVAVGLLKKM-DKAGGRPDIVI-YNTIIDGLCKDRLVSEALDIFSEIKGKGV 255
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L + L++ M+ + N+MP+++ +N +V LC +
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSL--NIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P+ TYN + KV E F MI P ++ I
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + A E+++ + G++P + N L+ GL GR + R ++M
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA+ F EM+ P+ V+ + + L + + EA +++M + P +++
Sbjct: 277 EASALFNEMMS-LNIMPD-VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ N ++D M+ G MPN++ YN ++ C +D FD+M F
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKG--CMPNVVSYNILINGYCKAQRIDEARELFDEMSF 392
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P++ YN + L + + E F +M P + C + L +
Sbjct: 393 RGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDN 452
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A+ ++ + ++ + P + ++L+ + G++
Sbjct: 453 ALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P FS+ ++ L + ++ +D MV G+ PNL YN ++ C
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ--PNLHTYNTIIKGFCKIGKTTVAV 209
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+M G PD + YN I + L K++ V E + F E+ +P + + L
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++D+ E A ++N ++ I+P + N+L+ L G LS+ + + M+ + +
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 4/153 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V EA F M+ + +V++Y + + +++DEA + M
Sbjct: 338 GYCLQNKVFEARMVFDAMITK--GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + +L+ M G + P+L+ ++ LC +DN
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCS--PDLVTCTILLDSLCKLGYLDNA 453
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
R F M P+ +TY+++ + K+ K++
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486
>gi|242049502|ref|XP_002462495.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
gi|241925872|gb|EER99016.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
Length = 294
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 35/253 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEGNV +A F EMV+R +P +++ Y + + L + + VD A LR M G+
Sbjct: 21 GFFKEGNVNKACDLFNEMVQR-GISP-NLVTYNSVVHALCKARAVDRAEAILRPMVGKGV 78
Query: 61 FPTLKFFSNALDI-------------------LVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
P ++N + + L K+ ++D+ V IG + PN+
Sbjct: 79 RPDRMTYNNLIYVDSSMGQWKEAVRSCSIINNLCKVGRVVEAQDIFDLTVSIGVH--PNV 136
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
++YN ++ C + + + FD MV G P+ +TY+ + K +++E + F E
Sbjct: 137 MVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVVTYSTLVNGYCKIGRINEGLSLFTE 196
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ +P +AI+ + +A ++ I +G++P + NV++ L G
Sbjct: 197 MLHKGIEP------SAISRVKEAK------GLFASISGSGLVPSVVTYNVMMTNLIKEGL 244
Query: 222 LSDVRRFAEEMLN 234
+ + R M N
Sbjct: 245 VEEADRMFSFMEN 257
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
G C P + +S +D K + L++ MV G + PNL+ YN+VV LC
Sbjct: 5 GAVCSPNVVAYSTVIDGFFKEGNVNKACDLFNEMVQRGIS--PNLVTYNSVVHALCKARA 62
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYN-------------------MIFECLIKNKKVHEVEN 157
VD MV G PD +TYN I L K +V E ++
Sbjct: 63 VDRAEAILRPMVGKGVRPDRMTYNNLIYVDSSMGQWKEAVRSCSIINNLCKVGRVVEAQD 122
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
F + P + T + + + A+++++ ++ GI P + + L+ G
Sbjct: 123 IFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVVTYSTLVNGYC 182
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
+GR+++ EML++ I ++ K K +
Sbjct: 183 KIGRINEGLSLFTEMLHKGIEPSAISRVKEAKGLF 217
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G PN++ Y+ V+ +V+ F++MV G P+ +TYN + L K
Sbjct: 1 MAETGAVCSPNVVAYSTVIDGFFKEGNVNKACDLFNEMVQRGISPNLVTYNSVVHALCKA 60
Query: 150 KKVHEVENFFHEMIKNEWQP 169
+ V E M+ +P
Sbjct: 61 RAVDRAEAILRPMVGKGVRP 80
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EMV+ P+ V+AY T + + K+V+E ++ R M
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPD-VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + + D + ++ MV G + P+++ YN ++ LCNN +V+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH--PDIMTYNILLDGLCNNGNVETALVV 448
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+ M D +TY + E L K KV + + F + +P + T ++
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLL 213
E A ++ + E+G LP + N L+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ + ++ Y F+ R Q+ AL L M P++ ++ L+
Sbjct: 96 SLGEQMQNLGIS-HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
N + V L D MV +G+ P+ + + +V L +N ++MV G
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQ--PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY + L K + N ++M K + + + T I L + A ++
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+N + GI P + N L+ L N GR SD R +ML + I V L AF
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 254 ESR 256
E +
Sbjct: 333 EGK 335
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 7/227 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + K +D+A M+ + P + ++ + L + +L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLI 147
M + N+ P+L+ +NA++ + + +D+MV FPD + YN + +
Sbjct: 310 DM--LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+V E F EM + + T I A + + A ++ ++ +G+ P
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKKA 250
+ N+LL GL N G + E M R I+ Y ++ L KA
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 5/243 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
G+M+ + + P ++ + L G ++ EA+ + M P F+ + L
Sbjct: 133 LGKMM-KLGYGPS-IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+ N ++ V L + MV G P+L+ Y AV+ LC + D ++M
Sbjct: 191 FQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D + YN I + L K K + + + F++M +P I+ L + A +
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM-QKLKKAFYN 253
+ +LE I P N L+ G+L + + +EM+ + DV L K F
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 254 ESR 256
R
Sbjct: 369 YKR 371
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 135 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 192
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 193 VYTYSVLINGLCKESKMDGANGLFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 251 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 310
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 311 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 361
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 101 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 158
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ F E
Sbjct: 159 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 218
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 278
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 279 LKQAHDLIDEM 289
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D
Sbjct: 156 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDGAN 213
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 333
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 334 VAYTALISGLCQEGRSV 350
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A +++ +L G++P + L+ G
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 241 NGRVDLAMEIYKQMLSQSLL 260
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 19/262 (7%)
Query: 16 GEMVERFEWNP--------EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
GE+ E FE V Y + + K+ EA L M + P +
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D ++ DS ++ + M+ G L NL YNA+V +C D++ ++M
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKL--NLFTYNALVKGVCKFGDMEKADALLNEM 402
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G PD+ TYN + E +K + V++ EM K+ PT C I L
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVT 243
E A ++ ++ G+ P L+ G GR + R + M + +L Y+
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522
Query: 244 MQKLKKAFYNESRSMRDRFDSL 265
+ L K SR M + D L
Sbjct: 523 IIGLCK-----SRKMEEAKDYL 539
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 12/270 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G++ +A++ F E++ P V+ Y T + ++ + EA++ L+VM +
Sbjct: 455 GLCRHGSIEDASRVF-EIMVSLGVKPNAVI-YTTLIKGHVQEGRFQEAVRILKVMDKKGV 512
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +++ +++ L S + D +V I L PN+ Y A++ C + ++
Sbjct: 513 QPDVLCYNS---VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQV 569
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R+F +M+ G P+ + + + K E + F M+ P + I
Sbjct: 570 ADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR---- 235
LL + + A+E+ + LE G++P + N ++ G G + + E M +
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
I+ Y+ + L KA E R+ FD +
Sbjct: 690 NIITYNALINGLCKA--GEIERARELFDGI 717
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + EA EM+ER P +V Y + + ++ A ++ + M G
Sbjct: 525 GLCKSRKMEEAKDYLVEMIER-GLKP-NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K +T ++ M +G ++ P++ Y+A++ L N +
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCM--LGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + G PD TYN I K + + M + P + I
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L A E E A E+++ I G+ + ++ G G LS R +EM
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 106/257 (41%), Gaps = 4/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++G+ EA + EM+ R ++ Y + + + +++A L M
Sbjct: 350 GFMRQGDSGEAFRVKEEMLAR--GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++N ++ +K +++ L M NL+P ++ LC + +++
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK--SNLVPTAYTCGMIINGLCRHGSIEDA 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F+ MV G P+++ Y + + ++ + E M K QP L + I
Sbjct: 466 SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIG 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + + E A + ++E G+ P + L+ G G + R+ +EML I
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN 585
Query: 241 DVTMQKLKKAFYNESRS 257
DV L + E +
Sbjct: 586 DVVCTALIDGYCKEGST 602
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 111/295 (37%), Gaps = 48/295 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG+ EA F M+ R +P+ V Y + L+R ++ A++ L +
Sbjct: 595 GYCKEGSTTEATSIFRCMLGR-SVHPD-VRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD-- 118
P + +++ + K QL + M G + PN+I YNA++ LC +++
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGIS--PNIITYNALINGLCKAGEIERA 710
Query: 119 ---------------------------------NVFRFFDQMVFHGAFPDSLTYNMIFEC 145
FR FD+M G PDS Y+ + +
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN----G 201
K + + F E ++ + T +++ L+D + N +LE+
Sbjct: 771 CRKEGNTEKALSLFLESVQKGFAST-----SSLNALMDGFCKSGKVIEANQLLEDMVDKH 825
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ P + +L+ G L + +F +M R ++ +T L + R
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGR 880
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L+ YN V+G LC +VD F M G D TY+++ + K K+ E +
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM +P + I + + A + +L G+ + N L+ G+
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388
Query: 219 LGRLSDVRRFAEEMLNRRILI 239
G + A+ +LN I++
Sbjct: 389 FGDMEK----ADALLNEMIMV 405
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 100/266 (37%), Gaps = 36/266 (13%)
Query: 1 GWEKEGNVVEANKTFGEMV-----------------ERFEWNPEHVLAYETFLITLIRGK 43
G+ K GN+ +A + F EM R E N E L+ FL ++ +G
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL--FLESVQKGF 792
Query: 44 QVDEALKFL--RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF------ 95
+L L K + + +D VK + T+T+ L D GF
Sbjct: 793 ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI-LIDYHCKTGFLKEAEQ 851
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
NLMPN + Y A++ +F FD+M+ PD +T++++ + +
Sbjct: 852 FFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHL 911
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + +M+K + C I L + +++ I E G+ A
Sbjct: 912 KEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLA 971
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEML 233
+ + L+ G++ R + M+
Sbjct: 972 TCSTLVRCFHKAGKMDGAARVLKSMV 997
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 9/160 (5%)
Query: 107 VVGLLCNN---------NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
VVGLLC N N ++ +RF++ M+ D TY + + E +
Sbjct: 198 VVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKR 257
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
EM + P+ + I L A E + A E+ + + G++ + ++L+ G
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
R ++ + EEM ++ + V L F + S
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 10/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG VE F +M+++ +V Y + + + + EA+ MK E
Sbjct: 281 GLCKEGKCVEGYAVFEKMIQK--GCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGL 338
Query: 61 FPTLKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + + ++ + K L+++ ++ + G+ N M +Y++++ L V
Sbjct: 339 EPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVN-GVAVNAM----LYSSLIDGLGKAGRV 393
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ F++MV G PDS YN + + L K K E FF M T
Sbjct: 394 HEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIM 453
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I L + E A+++W+ +++ GI P A+ L +GL G+++ + +E+
Sbjct: 454 INGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDEL 508
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G GNV+EA K F + ER P+ V +Y +I + K++DEA+ M+ +N
Sbjct: 338 GHCLHGNVLEARKLFDTVFERGIL-PD-VWSYTILIIGYCKCKRIDEAVSLFNEMRCKNM 395
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D L K ++ +L+ + G PN+I YN ++ C D+D
Sbjct: 396 VLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP--PNVITYNILIDAFCKIQDIDMG 453
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G P LTYN++ K+K++ E N M P + +
Sbjct: 454 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 513
Query: 181 LLDADEPEFAIEIWNYILENGILPLE-ASANVLL 213
L + A E++ ++ G P++ A+ NVLL
Sbjct: 514 LCKSGRISDAWELFK-VMHVGGPPVDVATYNVLL 546
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 30 LAYETFLITLIR-GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L + G+ +D A + L+ M+G+ P + ++ +D K + L+
Sbjct: 190 VCYGTLINGLCKIGRSID-AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+V +G + P+++ Y +++ C V + +MV P+ T+N++ + +
Sbjct: 249 KIVDMGID--PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E + F+ M+K QP + T I+ A ++++ + E GILP S
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+L++G R+ + EM + +++ V L R
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGR 414
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 64 LKFFSNA----LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
L+FFS+ IL N V L++ + I +P++I +N ++G +
Sbjct: 45 LRFFSHCPKQNAKILSSFNGIDDAVTLFNHL--INMQPLPSVIQFNTIIGSVVKMKHCPV 102
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
QMVF G P T ++ C ++ + ++K +QP + T +
Sbjct: 103 AISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMK 162
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
L E + A++ + + G+L E L+ GL +GR D + +EM +
Sbjct: 163 GLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKP 222
Query: 236 RILIYDVTMQKLKK 249
I+IY++ + K
Sbjct: 223 NIVIYNMIIDSFCK 236
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A + F + + P +V+ Y + + + +D ++ ++M G+
Sbjct: 408 GLCKSGRISYAWELFSTINN--DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGL 465
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ K + L +M NL P+ I YN++ LC + + +
Sbjct: 466 TPTVLTYNILINGYCKSKRIREAMNLLSVMQSK--NLAPDSITYNSLFDGLCKSGRISDA 523
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ F M G D TYN++ + K + V
Sbjct: 524 WELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/256 (16%), Positives = 94/256 (36%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G E + EMV + NP +V + + R ++ EA +M
Sbjct: 268 GFCRTGQWGEVKQLMCEMVNK-NINP-NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQ 325
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ + + +L+D + G ++P++ Y ++ C +D
Sbjct: 326 QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG--ILPDVWSYTILIIGYCKCKRIDEA 383
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M D + Y+ + + L K+ ++ F + + P + I
Sbjct: 384 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDA 443
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + IE++ + G+ P + N+L+ G R+ + M ++ +
Sbjct: 444 FCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPD 503
Query: 241 DVTMQKLKKAFYNESR 256
+T L R
Sbjct: 504 SITYNSLFDGLCKSGR 519
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + + M+ P
Sbjct: 152 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPD 209
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 210 VYTYSVLINGLCKESKMDDXNELFDEMLDXG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 267
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 268 YKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 327
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 328 EGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 173 PSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASG--VQPDVYTYSVLINGLCKESKMDDXN 230
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 231 ELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGL 290
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 291 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDD 350
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 351 VAYTALISGLCQEGRSV 367
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 42/265 (15%)
Query: 12 NKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N ++E E EH V+ Y T + + +DEA+ L+ M C P
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L +L M+ G +PN + +N ++ LC V+ Q
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQG--CLPNPVTFNTIINFLCKKGLVEQAIELLKQ 466
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---------- 176
M+ +G PD ++Y+ + + L K K E + MI P + ++
Sbjct: 467 MLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526
Query: 177 -------------------------AITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
I+ L E + AI+ Y++ NG +P E++
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRR 236
L+ GL + G L + + E+ +RR
Sbjct: 587 LIKGLASEGLLCEAQDLLSELCSRR 611
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG+ AN+ M + P +V+ Y T L + + ++A + L M +NC
Sbjct: 275 GICKEGHHEVANEILSRM-PSYGLKP-NVVCYNTVLKGICSADRWEKAEELLTEMYQKNC 332
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G MP++I Y V+ C +D
Sbjct: 333 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG--CMPDVITYTTVINGFCKEGLIDEA 390
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L ++ + E MI+ P P+ T I
Sbjct: 391 VMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINF 450
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ I
Sbjct: 451 LCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510
Query: 241 DVTMQKLKKAFYNESR 256
+T + A E R
Sbjct: 511 VITYSSMAFALAREGR 526
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V +A + +M+ NP+ +++Y T + L + + +EAL+ L VM + P
Sbjct: 453 KKGLVEQAIELLKQMLVN-GCNPD-LISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S+ L + +Q++D + + + ++YNAV+ LC + D F
Sbjct: 511 VITYSSMAFALAREGRIDKVIQMFDNIQD--ATIRSDAVLYNAVISSLCKRRETDLAIDF 568
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
MV +G P+ TY + + L + E ++ E+
Sbjct: 569 LAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCS 609
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 17/253 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G V EA + V P + Y + L ++ +AL L M +C
Sbjct: 93 GYCRVGQV-EAARRLAAAVPV----PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSC 147
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + + +++ + + G L + N V+ +C+ VD
Sbjct: 148 VPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTL--DTGNCNLVINAICDQGCVDEG 205
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK----------NEWQPT 170
++ G D ++YN + + L K+ +VE EM+K + P
Sbjct: 206 LEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPD 265
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
AT I + E A EI + + G+ P N +L G+ + R
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325
Query: 231 EMLNRRILIYDVT 243
EM + + DVT
Sbjct: 326 EMYQKNCPLDDVT 338
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + L + EA L MKG N P L FS +DI+ K + + +
Sbjct: 266 VVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILK 325
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +G P++ YN ++ C +V + F+ M+ G PD +++++ K
Sbjct: 326 TMTEMGVE--PDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K++ E + F EM P ++ T I+ L A P A E++ + NG P +
Sbjct: 384 AKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443
Query: 209 ANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDS 264
++LL L G L R L ++ Y++ + + K Y + + R+ F
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK--YGKFKDARELFAE 501
Query: 265 LE 266
L
Sbjct: 502 LS 503
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 8/256 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G E K E ++ P+ V+ Y T + L + + V+EA+ MKG
Sbjct: 205 GLCRVGKTTEVIKLL-EHMKVVGCEPD-VVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +++ + L L L + M G N+MP+L+ ++ ++ ++C +V
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG--GNIMPDLVAFSVLIDIMCKEGEVSEA 320
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD TYN + +V E F MI P + + +
Sbjct: 321 RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNG 380
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
A + A ++++ + G++P S N L+ GL R + ++M +
Sbjct: 381 YCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPN 440
Query: 237 ILIYDVTMQKLKKAFY 252
++ Y + + L K Y
Sbjct: 441 LVTYSILLDCLSKQGY 456
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
I L PN+I ++ ++ C + FD MV G P+ +Y++I + L + K
Sbjct: 153 IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKT 212
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
EV M +P + T + L A+ I+ + GILP + L
Sbjct: 213 TEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSL 272
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ GLRNLGR + EM I+
Sbjct: 273 IHGLRNLGRWKEAFGLLNEMKGGNIM 298
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLI G ++ A++ VM P + +S + L ++ +T ++L + M +
Sbjct: 166 TLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVV 225
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G P++++YN +V LC + V+ F +M G P +TY + L +
Sbjct: 226 GCE--PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E +EM P + + I ++ E A I + E G+ P A+ N L+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343
Query: 214 VGLRNLGRLSDVRRFAEEMLNR 235
G + + R+ E M+++
Sbjct: 344 NGYCLRMEVVEARKVFEVMISK 365
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + FS ++ ++L+D+MV G+ PN+ Y+ ++ LC V
Sbjct: 159 PNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK--PNVHSYSIIIKGLCRVGKTTEVI 216
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ + M G PD + YN I + L K++ V+E + F +M PT + + I L
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A + N + I+P + +VL+ + G +S+ R + M
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 4/178 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ VVEA K F M+ + P+ V ++ + + K++DEA + M
Sbjct: 345 GYCLRMEVVEARKVFEVMISKGRM-PD-VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + +L+ M G+ PNL+ Y+ ++ L +D
Sbjct: 403 IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYP--PNLVTYSILLDCLSKQGYLDQA 460
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F M G PD +TYN++ + + K K + F E+ QP C I
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTI 518
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + EA + F EM R P+ V +Y T + L + ++ EA + + M
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHR-GLIPDTV-SYNTLISGLCQARRPLEAEELFKDMHSNGY 437
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S LD L K + L+ M G L P+L+ YN ++ +C +
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG--LKPDLVTYNIMIDGMCKYGKFKDA 495
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
F ++ G P++ + + K + E F +M K++ P
Sbjct: 496 RELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+A F++ M P F+ +D K + + ++ M G L PN++ YN+
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG--LKPNIVTYNS 313
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ LCNN ++ +D+MV G P+ +TYN + K K + E F ++ K E
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + T I E + + +L+ GILP ++ N L+ GL L +
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433
Query: 227 RFAEEMLNRR----ILIYDVTMQKLKK 249
EM N+ ++ Y++ + L K
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCK 460
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERF--EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G+ K G+ + K M E + P V + T + + + V A K M+ +
Sbjct: 244 GYCKRGSAGKMYKAEAFMKEMLANKICPNEV-TFNTLIDGFCKDENVAAAKKAFEEMQKQ 302
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + +++ ++ L + LWD MVG+G L PN++ YNA++ C +
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG--LKPNIVTYNALINGFCKKKMMK 360
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ FD + P+ +T+N + + K + E + M+ P I
Sbjct: 361 EATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLI 420
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + + A E+ N + G+ + N+L+ GL + + + EM N +
Sbjct: 421 AGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLK 480
Query: 239 IYDVTMQKLKKAFYNESR 256
VT L + E +
Sbjct: 481 PNHVTYNTLMDGYCMEGK 498
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 63 TLKFFSNALDILVKLN---DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
T F N L KLN D+ ++ W I PN++ YN +V C
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGIS--------PNVVTYNTLVDGYCKRGSAGK 253
Query: 120 VFR---FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+++ F +M+ + P+ +T+N + + K++ V + F EM K +P + +
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L + + E AI++W+ ++ G+ P + N L+ G + + + +++ +
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 237 ILIYDVTMQKLKKAFYNES 255
++ +T + A+ E
Sbjct: 374 LVPNVITFNTMIDAYCKEG 392
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + EA K F + V + E P +V+ + T + + ++E M E
Sbjct: 352 GFCKKKMMKEATKVFDD-VSKQELVP-NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L + D +L + M G L +++ YN ++ LC N+ N
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG--LKGDVVTYNILIDGLCKNDKSRNA 467
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M G P+ +TYN + + K+ N M K QP + I
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
++ E A + N +LE G+ P + +++ + + G D+
Sbjct: 528 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDI 572
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN---KKVHEVE 156
NL +N + LC ++ + M G P+ +TYN + + K K+++ E
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F EM+ N+ P + T I + A + + + + G+ P + N L+ GL
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318
Query: 217 RNLGRLSDV 225
N G+L +
Sbjct: 319 CNNGKLEEA 327
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 136 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 193
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 251
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K +++ EM +P T I
Sbjct: 252 YKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCK 311
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + ++ GL GR D + EML+
Sbjct: 312 EGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLS 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + K D ++D + G L P+++ YN ++ D
Sbjct: 117 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSVVSYNTLMNGYIRLGD 174
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D FR M+ G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + A+EI+ +L +LP + N L+ GL G L+ +EM
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 183 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKL-----KKAFYNESRSMRD 260
GR+ ++ML++ +L +T L KK N++ + D
Sbjct: 243 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLID 288
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 6/259 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M ++ F + AY + L + +VD+A + L MK ++
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDAR---AYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + + +D L K++ L++ G L N+I+Y++++ +D
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL--NVILYSSLIDGFGKVGRIDE 683
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K +++ E F M + + P + I
Sbjct: 684 AYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILIN 743
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + A W + + G++P + ++ GL +G ++D E +
Sbjct: 744 GLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIP 803
Query: 240 YDVTMQKLKKAFYNESRSM 258
+ L + N +R M
Sbjct: 804 DSASFNALIEGMSNANRPM 822
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 9/244 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+++ + L L + ++VDEAL VMK ++ P + ++ +D+L ++ D
Sbjct: 351 VVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRD 409
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PNL+ N +V LC N ++ R F+ G P+S+TY + + L K
Sbjct: 410 EMELAG--LFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + F +M+ P+ + I E +I+ ++ G P
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDRFDS 264
N + + G + R E+M + L Y + + L KA ++R + F +
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKA--GQARETSNIFQA 585
Query: 265 LERR 268
+ ++
Sbjct: 586 MSQQ 589
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
AY + L +Q + AL+ LR M+ ++ F+ + L + + L D +
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L P++++YN + VD ++FF ++ HG PD ++Y + L K
Sbjct: 238 KG--SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAG 295
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E E F +M P T I A+ + A ++ + E G +P S N
Sbjct: 296 RLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFN 355
Query: 211 VLLVGL 216
+L L
Sbjct: 356 SILTCL 361
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 6/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G + +A + F +M++ + NP + Y + + + ++ K + M
Sbjct: 464 GLGKKGKIDDAYRLFEKMLDAGHDANP---IIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L + +D + K + +++ M GF +P++ Y+ ++ L
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF--LPDVRSYSILIHGLTKAGQARE 578
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F M G D+ YN + + L K+ KV + EM PT + +
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVD 638
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ GI + L+ G +GR+ + EEM+ +
Sbjct: 639 GLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK 694
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 6/228 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V EA K EM E P ++L+ + L + Q++EA + C P
Sbjct: 399 GRVNEAYKIRDEM-ELAGLFP-NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSV 456
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + +D L K +L++ M+ G + P I+Y +++ + ++ + +
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKEDGHKIYK 514
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ G PD N +C+ K +V + F +M + P + + I L A
Sbjct: 515 EMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAG 574
Query: 186 EPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDVRRFAEEM 232
+ I+ + + G L+A A N ++ GL G++ EEM
Sbjct: 575 QARETSNIFQAMSQQG-FALDARAYNAVVDGLCKSGKVDKAYEVLEEM 621
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+IRG +V EAL L M C P++ ++ L+ + K +++ D M G
Sbjct: 182 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 241
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
PN++ YN ++ +C VD+ F +++ +G PD+++Y + + L K+ +
Sbjct: 242 CT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 299
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
VE F EM++ P + + E AI++ + +G N+++
Sbjct: 300 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 359
Query: 215 GLRNLGRLSDVRRFAEEM 232
+ GR+ D +F M
Sbjct: 360 TICKQGRVDDAFQFLNNM 377
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P+ V +Y T L L K+ ++ + M +NC
Sbjct: 255 GMCREGRVDDA-REFLNRLSSYGFQPDTV-SYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ + M G G N + N V+ +C VD+
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG--CAANTTLCNIVINTICKQGRVDDA 370
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+F + M +G PD+++Y + + L + ++ + + EM++ P + T I +
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E A + + E+G + N L+ G GR+
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 7/243 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + +VD AL+ M C P ++ L L +L
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 511
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + + PN++ +N +V C +D +QM+ HG P+ +TYN + + +
Sbjct: 512 AEM--LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ E H ++ N P + ++ I +L D E AI++++ + + G+ P
Sbjct: 570 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 629
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES--RSMRDRFDSL 265
N +L+ L F M++ + ++T L + NE + RD L
Sbjct: 630 IYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689
Query: 266 ERR 268
R
Sbjct: 690 CSR 692
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + EM+++ + P +V+ + + + +DEA++ + M C P L ++
Sbjct: 507 AAELLAEMLQK-DCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 564
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LD + K +S ++L +V G + P+++ Y++++G+L + V+ + F +
Sbjct: 565 LDGITKDCNSEEALELLHGLVSNGVS--PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P ++ YN I L K +FF M+ N P L T I L + D +
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 682
Query: 191 IEIWNYILENGIL 203
++ + G+L
Sbjct: 683 RDLLRELCSRGVL 695
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 7/247 (2%)
Query: 15 FGEMVE-----RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
FG+ +E R + +++ Y + + R +VD+A +FL + P ++
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L +L+ M + N MPN + ++ +V C V+ + +QM
Sbjct: 287 VLKGLCAAKRWEDVEELFAEM--MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
HG ++ N++ + K +V + F + M P ++ T + L A+ E
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A E+ ++ P E + N + L G + E+M + VT L
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464
Query: 250 AFYNESR 256
F + R
Sbjct: 465 GFCVQGR 471
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 57/155 (36%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+ Y ++ LC+ V D M+ G P +TY ++ E + K+ +
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM P + I + + A E N + G P S +L GL
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + + +VT L + F
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 5/259 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG+ +A T+ EM++R +P+ V+ Y + + L +G+ +D+A++ L M
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDR-RISPD-VVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF---NLMPNLIMYNAVVGLLCNNNDV 117
P + +++ + + + G L P++ Y ++ +
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ D MV +G PD YN++ K KV E F +M + P +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I +L + E A+ + +++ G+ P N L+ GL + EML+R I
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442
Query: 238 LIYDVTMQKLKKAFYNESR 256
+ + + + E R
Sbjct: 443 CLNTIFFNSIIDSHCKEGR 461
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +V + MV R +P+H + Y + + +VDEA+ M+ +
Sbjct: 315 GYATKGALVGMHALLDLMV-RNGIHPDHYV-YNILICAYAKQGKVDEAMLVFSKMRQQGL 372
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + IL K + ++ M+ G L P I+YN+++ LC N +
Sbjct: 373 NPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG--LSPGNIVYNSLIHGLCTCNKWERA 430
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G +++ +N I + K +V E E F M++ +P + +T I
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
A + + A+++ + ++ G+ P + L+ G + R+ D +EM ++
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 551 IITYNIILQGL 561
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNVV+ G VE + P L L K+ +A+ LR M +
Sbjct: 106 GFAALGNVVKK----GFRVEAITFTP--------LLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMV-GIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P + + L L N S ++L +M G G P+++ Y V+ D
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSG 213
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + +M+ PD +TY+ I L K + + + M+KN P NC T
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP---NCRTYT 270
Query: 179 TML---LDADEPEFAIEIWNYILENGILP 204
+++ + +P+ AI + +G+ P
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEP 299
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 99/251 (39%), Gaps = 41/251 (16%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN-- 59
+ K+G V EA F +M ++ NP+ V Y + L + +V++A+ + M E
Sbjct: 351 YAKQGKVDEAMLVFSKMRQQ-GLNPDAV-TYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 408
Query: 60 ----------------------------------CFPTLKFFSNALDILVKLNDSTHTVQ 85
C T+ FF++ +D K + +
Sbjct: 409 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-FFNSIIDSHCKEGRVIESEK 467
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L+D+MV IG P++I Y+ ++ C +D + MV G P+++TY +
Sbjct: 468 LFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLING 525
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K ++ + F EM + P + + L A E++ I E+G
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 585
Query: 206 EASANVLLVGL 216
++ N++L GL
Sbjct: 586 LSTYNIILHGL 596
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 39/201 (19%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+E+ K F MV R P+ ++ Y T + ++DEA+K L M P
Sbjct: 458 KEGRVIESEKLFDLMV-RIGVKPD-IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG-------------- 109
+ ++ K++ + L+ M G + P++I YN ++
Sbjct: 516 TVTYRTLINGYCKISRMGDALVLFKEMESSGVS--PDIITYNIILQGLFQTRRTAAAKEL 573
Query: 110 ---------------------LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
LC N D+ R F + ++ T+N++ + L+K
Sbjct: 574 YVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 633
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
+ E ++ F N P
Sbjct: 634 VGRNGEAKDLFVAFSSNGLVP 654
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 140 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 197
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 198 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LIPNGVTFTTLIDGRCKNGRVDLAMEI 255
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ PD +TYN + L K + + + EM +P T I
Sbjct: 256 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 315
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 316 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 106 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 163
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 164 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 223
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 224 MLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 283
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 284 LKQAHDLIDEM 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 161 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 218
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + M+ P + T I L
Sbjct: 219 ELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 278
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 279 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 338
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 339 VAYTALISGLCQEGRSV 355
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 126 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 185
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 186 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCK 245
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ + ML++ +L
Sbjct: 246 NGRVDLAMEIYKRMLSQSLL 265
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + + +VD AL+ L++M+ + C P +++ + LVK + L
Sbjct: 346 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 405
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G ++PN+I Y ++ C+ +D DN FR F+ M +G PD Y ++ + L
Sbjct: 406 TKMQKDG--IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 463
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E +F +++ T + T I A +FA + +++ G P
Sbjct: 464 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 520
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ +VLL L RL++ ++M R I
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 42 GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
++ D+AL+ M C L+ F ++ L+K + +L + + G L+PN+
Sbjct: 290 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG--LVPNV 347
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
I Y +++ C + VD M G P++ TYN + L+K+KK+H+ +
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M K+ P + T + D + + A ++ + +NG+ P E + VL L GR
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 467
Query: 222 LSDVRRF 228
+ F
Sbjct: 468 AEEAYSF 474
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L K V +AL +MK + C P ++ F+ + L K L+D M
Sbjct: 140 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 199
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G ++P+++ YNA++ +++ + + M +G PD TYN + L ++
Sbjct: 200 PQNG--VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQ 256
Query: 151 KVHEVENFFHEMIKNEWQPT 170
K E E + +K + PT
Sbjct: 257 KTEEAEELLNNAVKEGFTPT 276
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 17 EMVERFEWNP-EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
EM+E+ P EH AY L + + +EA F+ V KG T +++ +D
Sbjct: 441 EMMEQNGLKPDEH--AYAVLTDALCKAGRAEEAYSFI-VRKGVA--LTKVYYTTLIDGFS 495
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ L + M+ G P+ Y+ ++ LC ++ DQM G
Sbjct: 496 KAGNTDFAATLIERMIDEGCT--PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE-IW 194
Y ++ + +++ K + ++EM + +P+ AT T+ +++ E +E
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS----ATTYTVFINSYCKEGRLEDAE 609
Query: 195 NYILE---NGILPLEASANVLLVGLRNLG 220
+ IL+ G+ P + N+L+ G ++G
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMG 638
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 46/230 (20%)
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
K ++ AL L + + + + +++ +V G L+P+ + YN ++ C D+ R+F
Sbjct: 34 KCYNFALRSLARFDMTEYMGRVYSQLVQDG--LLPDTVTYNTMIKSYCKEGDLTTAHRYF 91
Query: 125 DQMVFHGAFPDSLT-----------------------------------YNMIFECLIKN 149
++ G P++ T Y ++ + L
Sbjct: 92 RLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDA 151
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K V + F M ++ P I+ L + A +++ + +NG++P +
Sbjct: 152 KCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 211
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR---------RILIYDVTMQKLKKA 250
N ++VG LGR++D + E M LIY + QK ++A
Sbjct: 212 NAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 261
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A F M + V+ Y ++ + ++++ALK +M+ C
Sbjct: 182 GLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 239
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + N L + + +L + V GF P ++ + ++ C D+
Sbjct: 240 HPD-DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFT--PTVVTFTNLINGYCMAEKFDDA 296
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R ++M+ D + + LIK ++ E + +E+ N P + + I
Sbjct: 297 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 356
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ + + A+E+ + +G P + N L+ GL
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 31/236 (13%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ KEG + +A +M ER P+ V+ Y + +D A L+ M G +C
Sbjct: 599 YCKEGRLEDAEDLILKM-EREGVAPD-VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 656
Query: 62 PTLKFFSNALDILVKLN----DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + L L+K N S T +W+++ ++
Sbjct: 657 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI-------------------------EL 691
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D ++ ++MV HG P TY+ + K ++ E M P
Sbjct: 692 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 751
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I D E A+ + + E G P S +L+VGL N G V+ ++L
Sbjct: 752 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN+ + ++ LC + V + FD M +G P +TYN + K ++++
Sbjct: 171 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 230
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M KN P T I L D + E A E+ N ++ G P + L+ G
Sbjct: 231 KELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 289
Query: 219 LGRLSDVRRFAEEMLNRRI 237
+ D R +M++ +
Sbjct: 290 AEKFDDALRMKNKMMSSKC 308
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFDEMLNNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLTDEM 302
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMEDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 16/255 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + EA + F EMV R + +V++Y T + L + A+ + M+ C
Sbjct: 167 GLCNEGKIKEAVELFNEMVRR--GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGC 224
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K ++ M+ G + PN+ YN +V C ++
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG--IPPNVFTYNCMVHGFCILGQLNEA 282
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F +MV PD++T ++ + L K V E F M + +P +
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPN----ISTYNA 338
Query: 181 LLDADEPEF----AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM---- 232
L+D + A +++ ++ G P S N+L+ G R+ + + EM
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 233 LNRRILIYDVTMQKL 247
LN + Y MQ L
Sbjct: 399 LNPDTVTYSTLMQGL 413
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLA-YETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
++ +A +F MV NP +A + FL + + KQ + M +
Sbjct: 68 SIDDALASFYRMVR---MNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVY 124
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ ++ L +LN V + M +G + P +NA++ LCN + F+
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIH--PTASTFNALINGLCNEGKIKEAVELFN 182
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+MV G P+ ++YN I L K + F +M +N +P + T I L
Sbjct: 183 EMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDR 242
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
A+E + +L+ GI P + N ++ G LG+L++ R +EM+ R ++ VT+
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLT 302
Query: 246 KL-----KKAFYNESR 256
L K+ +E+R
Sbjct: 303 ILVDGLCKEGMVSEAR 318
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A + EM++R P +V Y + Q++EA + + M G + P
Sbjct: 244 VNDAMEFLSEMLDR--GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ +D L K + +++ M G PN+ YNA++ C ++ + F+ M
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVE--PNISTYNALMDGYCLQRLMNEAKKVFEIM 359
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G P +YN++ K++++ E ++ EM P + +T + L P
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+ I+ + G+LP + ++LL G G L + + + M +++
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA K F E++ R P V +Y + + +++DEA L M + P +S
Sbjct: 351 EAKKVF-EIMIRQGCAPG-VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + + ++ M G L+PNL+ Y+ ++ C + +D + M
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYG--LLPNLVTYSILLDGFCKHGHLDEALKLLKSMQE 466
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ + + ++ E + K+ + F ++ + +PT I LL +
Sbjct: 467 KKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDE 526
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
A +++ + ++G LP S NV++ G S R +EM+ +R
Sbjct: 527 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALYVLTGMIKSGCKPNIHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ + L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q+ G PD +N++ L K+ + + +M + + P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPNLVSHNTLMEG 313
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++ ++
Sbjct: 314 FYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKTVLT 373
Query: 241 DVT 243
+T
Sbjct: 374 KIT 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F N +D++L L + + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGFCKNG-----------------YIDKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + + + M+ G PN+ +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCK--PNIHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L K + E N E++ P + + +
Sbjct: 183 AIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN + G P N+L+ GL ++G++ +M R+
Sbjct: 243 GLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
V+ L + FY +
Sbjct: 303 NLVSHNTLMEGFYKDG 318
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + +L R +V+EA+ L+VMK + P + + K + ++
Sbjct: 129 NVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFL 188
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ G +P+++ YN ++ LC N D + F+++ G P+ +YN +F L
Sbjct: 189 ESMISDG--CLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALW 246
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ EM+ + P + + I+ L + AIE+ + + P
Sbjct: 247 SSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVI 306
Query: 208 SANVLLVGLRNLGRLSD 224
S N++L+GL + R+SD
Sbjct: 307 SYNIVLLGLSKVHRISD 323
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++L D M+ G L P++ ++NAVVG +C VD F F + G PD ++Y+++
Sbjct: 45 MKLLDEMIESG--LRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILL 102
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L+ +K + E +M+ +P + + I+ L + E A+ + + E G+
Sbjct: 103 RGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLT 162
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P S + L+ R+ F E M++ L
Sbjct: 163 PDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCL 197
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 4/243 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G V + K EM+E P+ + + + + R VD A +F+R + + P +
Sbjct: 38 KGGVDDVMKLLDEMIES-GLRPDMFI-FNAVVGGMCREGLVDRAFEFIRYISAKGYAPDV 95
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S L L+ +L M+ G PN++ Y+ ++ LC + V+
Sbjct: 96 ISYSILLRGLLNQRKWEDGEKLMSDMLSKGCE--PNVVTYSILISSLCRDGKVEEAVSLL 153
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD+ +Y+ + K +V F MI + P +N T ++ L
Sbjct: 154 KVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKN 213
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A++I+ + E G P +S N L L + G EML++ I ++T
Sbjct: 214 GKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITY 273
Query: 245 QKL 247
L
Sbjct: 274 NSL 276
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++G V EA M E+ P+ +Y+ + + +VD A++FL M + C P
Sbjct: 142 RDGKVEEAVSLLKVMKEQ-GLTPD-AYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPD 199
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K + +++++ + +G PN+ YN + L ++
Sbjct: 200 IVNYNTILSTLCKNGKADEALKIFEKLGEVGCP--PNVSSYNTLFSALWSSGHKIRALGM 257
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+M+ PD +TYN + CL ++ V + +M + +QP+
Sbjct: 258 ILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPS 304
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 65/157 (41%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L+ Y ++ VD+V + D+M+ G PD +N + + + V F
Sbjct: 24 SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+ + P ++ + + LL+ + E ++ + +L G P + ++L+ L
Sbjct: 84 RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G++ + + M + + + L AF ESR
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESR 180
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 34/254 (13%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS---------------THTVQLW 87
++ DEA K +MK + P ++ ++ L + +KLN + TV +
Sbjct: 171 RRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTF 230
Query: 88 DIMVGI------------------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+IMV + G PN++ YN ++ + +++ R D M
Sbjct: 231 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 290
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PDS TY + + K ++ E F +M++ P + T I + + E
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A + +++ GI+P ++ N+L+ L GR+ + +EM + I+ +T L
Sbjct: 351 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410
Query: 250 AFYNESRSMRDRFD 263
Y+ + + FD
Sbjct: 411 G-YSRCGNAKKAFD 423
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 41/302 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + +A + G M E + P +V++Y T + ++ A + L M+ + P
Sbjct: 239 KEGKLKKAREFIGFM-EGLGFKP-NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 296
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + + + K L+D MV IG L+PN + YN ++ CN D++ F +
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIG--LVPNAVTYNTLIDGYCNKGDLERAFSY 354
Query: 124 FDQMV--------------FH---------------------GAFPDSLTYNMIFECLIK 148
D+MV H G PD++TYN++ +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + +EM+ +PT + + I +L + + A +++ IL+ G+ P
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR--FDSLE 266
N ++ G G + +EM + + +VT L + E + R D ++
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534
Query: 267 RR 268
RR
Sbjct: 535 RR 536
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN +A EM+ + P HV Y + + L R ++ EA + +
Sbjct: 411 GYSRCGNAKKAFDLHNEMLSK-GIEPTHV-TYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D + L M ++ P+ + +N ++ C V+
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRK--SVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G PD ++YN + + + + EM+ + PT L I
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E + A E+ ++ GI P +++ L+ G+ N+ L
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 12/259 (4%)
Query: 2 WEKEGNVVEANKTFGEMVE------RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 55
W K A GE V R P + +Y + + R + +A++ M
Sbjct: 30 WNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEM 89
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P ++ +D +K D +L D MV G L PN I YN ++ LC
Sbjct: 90 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG--LKPNAITYNVLLSGLCRAG 147
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ D+M PD TY+++F+ L +N + + F + +KN C+
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 207
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ L + A E+ ++ G++P N L+ G G L +M +R
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267
Query: 236 RI----LIYDVTMQKLKKA 250
I + Y+ + L KA
Sbjct: 268 HIKPDHITYNALINGLCKA 286
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ G + F WN + + + EA+ LR M + P F N +
Sbjct: 20 SAGARPDTFAWNKA--------VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 71
Query: 74 LV-KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+ + V+++D M ++PN I YN ++ D++ FR DQMV HG
Sbjct: 72 GMWRAGRGGDAVEVFDEMTERA--VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 129
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
P+++TYN++ L + ++ E EM + P + L + + +
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ L+NG+ + + ++LL GL G++S AEE+L
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVS----IAEEVL 226
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 131/307 (42%), Gaps = 44/307 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A TFG+M R P+H+ Y + L + +++ A L M+
Sbjct: 247 GYCQTGELEGAFSTFGQMKSR-HIKPDHI-TYNALINGLCKAERITNAQDLLMEMQDNGV 304
Query: 61 FPTLKFFSNALD-------------ILVKLNDST----------------------HTVQ 85
PT++ F+ +D +L ++ ++ V
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 364
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D M +++PN +YNA++ + D F ++M +G P +TYN++ +
Sbjct: 365 ILDDM--FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E E + + + P ++ T I+ + A+++ + + GI
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDR 261
+ + L+ GL GRL+++ ++M+ ++ I+++ ++ K + NE ++ R
Sbjct: 483 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK-YGNEIKAEDLR 541
Query: 262 FDSLERR 268
+ L++R
Sbjct: 542 KEMLQKR 548
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P ++YN ++ C +++ F F QM PD +TYN + L K +++
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ EM N PT T I + E + + + ENG+ P S ++
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 352
Query: 216 LRNLGRLSDVRRFAEEMLNRRIL 238
G++ + ++M ++ +L
Sbjct: 353 FCKNGKIPEAVAILDDMFHKDVL 375
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+IRG +V EAL L M C P++ ++ L+ + K +++ D M G
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
PN++ YN ++ +C VD+ F +++ +G PD+++Y + + L K+ +
Sbjct: 211 CT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
VE F EM++ P + + E AI++ + +G N+++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 215 GLRNLGRLSDVRRFAEEM 232
+ GR+ D +F M
Sbjct: 329 TICKQGRVDDAFQFLNNM 346
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P+ V +Y T L L K+ ++ + M +NC
Sbjct: 224 GMCREGRVDDA-REFLNRLSSYGFQPDTV-SYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ + M G G N + N V+ +C VD+
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG--CAANTTLCNIVINTICKQGRVDDA 339
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+F + M +G PD+++Y + + L + ++ + + EM++ P + T I +
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E A + + E+G + N L+ G GR+
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 14/251 (5%)
Query: 16 GEMVER----FEWNPEHVLAYETFLI-----TLIRGKQVDEALKFLRVMKGENCFPTLKF 66
G MVER E H A T L T+ + +VD+A +FL M C P
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + +L MV N PN + +N + +LC ++ +Q
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M HG + +TYN + +V F+ M +P + T +T L +A+
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+ A E+ +L+ P + NVL+ G + + E+M+ +T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 247 LKKAFYNESRS 257
L N+ S
Sbjct: 533 LLDGITNDCNS 543
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 7/243 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + +VD AL+ M C P ++ L L +L
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + + PN++ +N +V C +D +QM+ HG P+ +TYN + + +
Sbjct: 481 AEM--LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ E H ++ N P + ++ I +L D E AI++++ + + G+ P
Sbjct: 539 NDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES--RSMRDRFDSL 265
N +L+ L F M++ + ++T L + NE + RD L
Sbjct: 599 IYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Query: 266 ERR 268
R
Sbjct: 659 CSR 661
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + EM+++ + P +V+ + + + +DEA++ + M C P L ++
Sbjct: 476 AAELLAEMLQK-DCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LD + +S ++L +V G + P+++ Y++++G+L + V+ + F +
Sbjct: 534 LDGITNDCNSEEALELLHGLVSNGVS--PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P ++ YN I L K +FF M+ N P L T I L + D +
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651
Query: 191 IEIWNYILENGIL 203
++ + G+L
Sbjct: 652 RDLLRELCSRGVL 664
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 7/247 (2%)
Query: 15 FGEMVE-----RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
FG+ +E R + +++ Y + + R +VD+A +FL + P ++
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L +L+ M + N MPN + ++ +V C V+ + +QM
Sbjct: 256 VLKGLCAAKRWEDVEELFAEM--MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
HG ++ N++ + K +V + F + M P ++ T + L A+ E
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A E+ ++ P E + N + L G + E+M + VT L
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 250 AFYNESR 256
F + R
Sbjct: 434 GFCVQGR 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 57/155 (36%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+ Y ++ LC+ V D M+ G P +TY ++ E + K+ +
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM P + I + + A E N + G P S +L GL
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + + +VT L + F
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
A+ +++ R ++ A++ L +M+ P L + A+ +LV N ++ + M
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G + PN++ YN ++ C+ V++ +M F G PD ++Y + L ++K
Sbjct: 233 QLVG--ITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDK 290
Query: 151 KVHEVENFFHEMIK-NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ EV N +M+K N+ P + T + ML + A+E E G +
Sbjct: 291 RIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGY 350
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ ++ GR+ + EM+ +
Sbjct: 351 SAIVNSFCMQGRMDRAKEIVNEMITK 376
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGENCFPTLKFFSNALDILVKLNDS 80
F+ P ++Y T + L + K++ E + +++K FP ++ + +L K +
Sbjct: 269 FKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHA 328
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
++ GF + + + Y+A+V C +D ++M+ G PD +TY
Sbjct: 329 DEALEFLRETEERGFQV--DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYT 386
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K KV E + +M K+ +P ++ + L A E+ N E+
Sbjct: 387 AVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEED 446
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + +V++ GLR G+LS+ EML + V + L K+ E +
Sbjct: 447 WWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQK 502
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 5/233 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++ + E +MV+ + P+ V Y T + L + DEAL+FLR + E F
Sbjct: 288 QDKRIKEVRNLMEKMVKDNKLFPDQV-TYNTLVHMLSKHGHADEALEFLRETE-ERGFQV 345
Query: 64 LKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
K +S ++ ++ + M+ G + P+++ Y AVV LC V+ +
Sbjct: 346 DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCS--PDVVTYTAVVNGLCKVGKVEEAKK 403
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
QM HG P++++Y + L ++ E + ++ W P + + + L
Sbjct: 404 MLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLR 463
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A ++ +L G P N+L+ L ++++ ++F EE LNR
Sbjct: 464 REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNR 516
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + GN +EA + E + W P + + Y + L R ++ EA +R M +
Sbjct: 426 GLCQHGNSLEAREMMNTSEEDW-WTP-NAITYSVVMHGLRREGKLSEACDVVREMLTKGF 483
Query: 61 FPT---LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
FPT + +L + K+N++ ++ + N + + V+ C ++++
Sbjct: 484 FPTPVEINLLIKSLCLEQKMNEAKKFMEEC-----LNRGCAVNAVNFTTVIHGFCQSDNI 538
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
D D M + PD++T+ I + L K ++ E + +M+K PTP+
Sbjct: 539 DTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVT 594
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 4/252 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G + A + EM+ + +P+ V+ Y + L + +V+EA K L+ M C P
Sbjct: 360 QGRMDRAKEIVNEMITK-GCSPD-VVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNT 417
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L+ L + +S ++ + + PN I Y+ V+ L +
Sbjct: 418 VSYTALLNGLCQHGNSLEAREMMNTSEEDWWT--PNAITYSVVMHGLRREGKLSEACDVV 475
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M+ G FP + N++ + L +K++E + F E + +N T I +
Sbjct: 476 REMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQS 535
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
D + A+ + + + N P + ++ L GR+ + + +ML + + VT
Sbjct: 536 DNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTY 595
Query: 245 QKLKKAFYNESR 256
+ + + R
Sbjct: 596 RAVIHQYCKMGR 607
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 20/265 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM R V+ Y + ++ KQV +A M C P
Sbjct: 270 KAGLIEQAQWLFEEM--RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIG--------------FNLMPNLIMYNAVVG 109
+ +D L K + + +++ ++G L PN++ Y A+V
Sbjct: 328 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 387
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + VD+ D M+ G P+ + Y+ + + K K+ + F +M K + P
Sbjct: 388 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 447
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR----LSDV 225
+ + I + + A+++ + +L++ P + ++ GL +G L +
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 507
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKA 250
E+ + ++ Y + L KA
Sbjct: 508 SLMEEKGCSPNVVTYTALIDGLGKA 532
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + +D L K + H +L D M+ G PN I+Y+A++ C +D+
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE--PNHIVYDALIDGFCKAGKIDSAQ 434
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F QM G P TY + + + K+ ++ +M+K+ P + I L
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
E E A+++ + + E G P + L+ GL G++
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F +M + + P V Y + + + + ++D A+K L M ++C
Sbjct: 423 GFCKAGKIDSAQEVFLQMT-KCGYLPS-VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 480
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L ++ +S ++L +M G + PN++ Y A++ L +D
Sbjct: 481 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS--PNVVTYTALIDGLGKAGKIDLS 538
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F QM G P+ +TY ++ L + + EM + W AI
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 598
Query: 181 LLDADEPEFAI--EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ I E+ +Y G +P+ +L+ GRL +EM+
Sbjct: 599 FSKSFIASLGILEEMESY----GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 649
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D A K M NC +N L + QL M+ GF +P+ Y
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF--VPDTSTY 226
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ V+ LC+ V+ F F +M G PD TY ++ + K + + + F EM
Sbjct: 227 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 286
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
PT + I L A + A +I++ +++ G P + + L+ GL G +S
Sbjct: 287 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 17 EMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
+M+ER ++ + VL T +I+ L+ DEA+ FL M+ +C P + + L +
Sbjct: 31 DMIEREDFKLDTVLC--THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 88
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
K ++ ++M+ G N PN ++N++V CN D ++ ++M G P
Sbjct: 89 KKKQLGWCKRIINMMMTEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 146
Query: 136 SLTYNMIFECLIKNKKVHE------VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+ YN+ + +K+ E + EM+ +N A L + +
Sbjct: 147 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 206
Query: 190 AIEIWNYILENGILP 204
A ++ ++ G +P
Sbjct: 207 AFQLIKEMMRKGFVP 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 20/269 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVER---------FEWNPEHVLA-----YETFLITLIRGKQVD 46
G K GN+ +A + + +++ F H LA Y + L + +VD
Sbjct: 337 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 396
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
A + L M C P + +D K +++ M G+ +P++ Y +
Sbjct: 397 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY--LPSVHTYTS 454
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ + + +D + QM+ P+ +TY + + L + + + M +
Sbjct: 455 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + I L A + + +++++ + G P + VL+ L G L R
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574
Query: 227 RFAEEMLN----RRILIYDVTMQKLKKAF 251
EM + + Y +Q K+F
Sbjct: 575 LLLGEMKQTYWPKYLQGYRCAIQGFSKSF 603
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 11 ANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A K +GEM+ N +V F L + D+A + ++ M + P +S
Sbjct: 172 AEKIYGEMLAANCVLNKVNV---ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L L+ M +G + P++ Y ++ C ++ F++M
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVG--VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 286
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P +TY + +K K+V + + FH M+ +P + + L A
Sbjct: 287 VGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 346
Query: 190 AIEIW 194
A E++
Sbjct: 347 AFEVY 351
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 39 LIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
+IRG +V EAL L M C P++ ++ L+ + K +++ D M G
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG 210
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
PN++ YN ++ +C VD+ F +++ +G PD+++Y + + L K+ +
Sbjct: 211 CT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
VE F EM++ P + + E AI++ + +G N+++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 215 GLRNLGRLSDVRRFAEEM 232
+ GR+ D +F M
Sbjct: 329 TICKQGRVDDAFQFLNNM 346
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + F + + + P+ V +Y T L L K+ ++ + M +NC
Sbjct: 224 GMCREGRVDDA-REFLNRLSSYGFQPDTV-SYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ + M G G N + N V+ +C VD+
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG--CAANTTLCNIVINTICKQGRVDDA 339
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+F + M +G PD+++Y + + L + ++ + + EM++ P + T I +
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E A + + E+G + N L+ G GR+
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 7/243 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + +VD AL+ M C P ++ L L +L
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + + PN++ +N +V C +D +QM+ HG P+ +TYN + + +
Sbjct: 481 AEM--LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K+ E H ++ N P + ++ I +L D E AI++++ + + G+ P
Sbjct: 539 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES--RSMRDRFDSL 265
N +L+ L F M++ + ++T L + NE + RD L
Sbjct: 599 IYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Query: 266 ERR 268
R
Sbjct: 659 CSR 661
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + EM+++ + P +V+ + + + +DEA++ + M C P L ++
Sbjct: 476 AAELLAEMLQK-DCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
LD + K +S ++L +V G + P+++ Y++++G+L + V+ + F +
Sbjct: 534 LDGITKDCNSEEALELLHGLVSNGVS--PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P ++ YN I L K +FF M+ N P L T I L + D +
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651
Query: 191 IEIWNYILENGIL 203
++ + G+L
Sbjct: 652 RDLLRELCSRGVL 664
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 7/247 (2%)
Query: 15 FGEMVE-----RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
FG+ +E R + +++ Y + + R +VD+A +FL + P ++
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L L +L+ M + N MPN + ++ +V C V+ + +QM
Sbjct: 256 VLKGLCAAKRWEDVEELFAEM--MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
HG ++ N++ + K +V + F + M P ++ T + L A+ E
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A E+ ++ P E + N + L G + E+M + VT L
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 250 AFYNESR 256
F + R
Sbjct: 434 GFCVQGR 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 57/155 (36%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+ Y ++ LC+ V D M+ G P +TY ++ E + K+ +
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM P + I + + A E N + G P S +L GL
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + + +VT L + F
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 34/254 (13%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS---------------THTVQLW 87
++ DEA K +MK + P ++ ++ L + +KLN + TV +
Sbjct: 193 RRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTF 252
Query: 88 DIMVGI------------------GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+IMV + G PN++ YN ++ + +++ R D M
Sbjct: 253 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 312
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PDS TY + + K ++ E F +M++ P + T I + + E
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A + +++ GI+P ++ N+L+ L GR+ + +EM + I+ +T L
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432
Query: 250 AFYNESRSMRDRFD 263
Y+ + + FD
Sbjct: 433 G-YSRCGNAKKAFD 445
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 41/302 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + +A + G M E + P +V++Y T + ++ A + L M+ + P
Sbjct: 261 KEGKLKKAREFIGFM-EGLGFKP-NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 318
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + + + K L+D MV IG L+PN + YN ++ CN D++ F +
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIG--LVPNAVTYNTLIDGYCNKGDLERAFSY 376
Query: 124 FDQMV--------------FH---------------------GAFPDSLTYNMIFECLIK 148
D+MV H G PD++TYN++ +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + +EM+ +PT + + I +L + + A +++ IL+ G+ P
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR--FDSLE 266
N ++ G G + +EM + + +VT L + E + R D ++
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556
Query: 267 RR 268
RR
Sbjct: 557 RR 558
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GN +A EM+ + P HV Y + + L R ++ EA + +
Sbjct: 433 GYSRCGNAKKAFDLHNEMLSK-GIEPTHV-TYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D + L M ++ P+ + +N ++ C V+
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRK--SVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G PD ++YN + + + + EM+ + PT L I
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E + A E+ ++ GI P +++ L+ G+ N+ L
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 21/242 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G + + + EM ++ H +Y ++ + +G + +A+K + MK +
Sbjct: 146 GWFKMGWWSKCREFWEEMDQKGVHKDLH--SYSIYMDIVCKGGKPWKAVKLYKEMKRKG- 202
Query: 61 FPTLKFFSNALDILVKLNDSTHTV----QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+K + +I+V+ + V +++ M +G MPN++ YN ++ LLC
Sbjct: 203 ---MKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELG--CMPNVVTYNTIIKLLCETGR 257
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
V ++ D M G D +TY+ F CL K K E+ F MI++ QP T
Sbjct: 258 VKEAYKMLDDMRKKGIVADVITYHCFFRCLEKPK---EILWLFDRMIESGVQP---RMDT 311
Query: 177 AITMLLDADEPEF---AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ ++ F + +W + E G P E + N L+ L G L RR+ EEML
Sbjct: 312 YVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDALVQKGMLHMARRYEEEML 371
Query: 234 NR 235
+
Sbjct: 372 AK 373
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V +Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPX-VXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLXKESXMDDXNELFDEMLXKG--LVPNSVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K +++ EM +P T I
Sbjct: 270 YKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLS 380
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Query: 35 FLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
L T+IRG ++ A + +M + C P + ++ + L KL V++ D M
Sbjct: 318 MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G PN++ Y+ ++ C N D+ DQM G +S YN I L K+
Sbjct: 378 EEKG--CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDG 435
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ E EM +P T I L + D+ + A I+ +LE G++ + N
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES---RSM 258
L+ L + GR + R A EM+ + V+ L KA E RSM
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 11/244 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + L R + +AL LR M C P + + LV
Sbjct: 177 PPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAT 236
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M+ +G ++ +N VV LC V R D+M+ HG P +TY +
Sbjct: 237 LLDEMLLMG--CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRG 294
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + ++ E + E LN T I L + A E++ + G P
Sbjct: 295 LCRTRQADEAYAMLGRV--PEVNVVMLN--TVIRGCLAEGKLARATELYEMMGSKGCPPD 350
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF-----YNESRSMRD 260
+ N+L+ GL LGR R +EM + VT L +F ++++R+M D
Sbjct: 351 VHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
Query: 261 RFDS 264
+ +
Sbjct: 411 QMSA 414
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L + ++DEA++ ++ MK + C P + ++ + L + ++ +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ G ++ N I YN ++ L ++ R ++MV HG D ++YN + + L K
Sbjct: 483 LEEG--VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEG 540
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
V EM+ +P + I L A + A+E+ +L G+ P + N
Sbjct: 541 NVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 600
Query: 211 VLLVGLRNLG----RLSDVRRFAEEMLNRRILIYDV 242
L+ GL +G L+ + + E ++ I+ Y++
Sbjct: 601 TLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNI 636
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 14/262 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A + EM E+ +++ Y T L + R D+A L M +
Sbjct: 360 GLCKLGRCGSAVRMLDEMEEK--GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGF 417
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ + L K ++L M G P++ YN ++ LCNN+ +D
Sbjct: 418 SMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCK--PDICTYNTIIYHLCNNDQMDEA 475
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---A 177
F ++ G + +TYN + L+ + + E +EM+ PL+ +
Sbjct: 476 EHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV---LHGCPLDVVSYNGL 532
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR- 236
I L + ++ + ++ GI P S N+L+ L G++ D ++EMLN+
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592
Query: 237 ---ILIYDVTMQKLKKAFYNES 255
I+ Y+ + L K + +
Sbjct: 593 TPDIVTYNTLINGLCKVGWTHA 614
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 15/281 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW +A + EMVER P ++ Y L R Q +EA F MK C
Sbjct: 205 GWCLIKRTPKALEMLKEMVER-GLTP-NLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKC 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +++ + L + + +++ MV G ++P++ +NA++ +LC + V+N
Sbjct: 263 DIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDG--VLPSVATFNALIQILCKKDSVENA 320
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++MV G P+S+TYN++ L ++ M ++ +P I
Sbjct: 321 ILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRY 380
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL---RNLGRLSDVRRFAEEMLNRRI 237
DA E E ++++ + LP + N+L+ + +N L + EM++R
Sbjct: 381 FCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGF 440
Query: 238 LIYDVTMQKL--------KKAFYNESRSMRDRFDSLERRWK 270
L +T ++ + F E S++ L R++K
Sbjct: 441 LPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLPRKFK 481
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 3/197 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
A+ M CF L F+ LD+L K S +++ + + + YN
Sbjct: 145 RAVTVFMSMHEYGCFQDLSSFNTILDVLCK---SKRVEMAYNLFKALKGKFKADCVSYNI 201
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+V C +MV G P+ TYN++ + + +E FF EM K +
Sbjct: 202 IVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRK 261
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ + I L E + A ++N ++++G+LP A+ N L+ L + +
Sbjct: 262 CDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAI 321
Query: 227 RFAEEMLNRRILIYDVT 243
EEM+ R + +T
Sbjct: 322 LIFEEMVKRGYVPNSIT 338
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 6/199 (3%)
Query: 47 EALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMY 104
+AL F +++ + F +A+DI +L D LW ++ + L P+ +
Sbjct: 74 KALHFFKILSHHPSYCHQASSFDHAIDICARLRDFR---TLWFLVSRMRSCRLGPSPRTF 130
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ F M +G F D ++N I + L K+K+V N F + +K
Sbjct: 131 AIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLF-KALK 189
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+++ ++ + A+E+ ++E G+ P + N++L G G+ ++
Sbjct: 190 GKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNE 249
Query: 225 VRRFAEEMLNRRILIYDVT 243
F EM R+ I VT
Sbjct: 250 AWGFFLEMKKRKCDIDVVT 268
>gi|296084128|emb|CBI24516.3| unnamed protein product [Vitis vinifera]
Length = 970
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+A+ F+ L + D AL F+ M C P L +++ + L + L D+
Sbjct: 360 VAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDL 419
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G ++P+L Y +V CN+ D+ + F DQM G P Y+ I CL +
Sbjct: 420 MQENG--IVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRR 477
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K++ E EN F M++ P + T I+ A ++++ ++E+G P S
Sbjct: 478 KRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSY 537
Query: 210 NVLLVGL 216
++ GL
Sbjct: 538 TAVISGL 544
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + + L + + V++A + +M+ P L + + D L D M
Sbjct: 396 TYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQM 455
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L P++ +Y++++G L + F M+ G PD++ Y + KN+
Sbjct: 456 NERG--LKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNR 513
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ E F +MI++ +QP+ + I+ L+ + + + +L++G +P
Sbjct: 514 RAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVP 567
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + MPNL +YN ++ C N + + + F+ M G P+ +T+ ++ + ++
Sbjct: 678 GSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEID 737
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
F++M + P + I L A A+ + + + + G+ P ++S LL
Sbjct: 738 HAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLL 797
Query: 214 VGL--RNLGRLSDVR 226
L +LG+ V+
Sbjct: 798 KCLCASHLGKYLGVK 812
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 34/234 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +G+V EA F M ER P + Y+T L R ++V+EA F+ M+ E
Sbjct: 87 GLCDKGHVDEAFYMFDTMRERTGL-PATIHLYKTLFYGLCRQERVEEAELFVGEMESEGH 145
Query: 61 FPTLKFFSN-------------ALDILVKL-----NDSTHTV-QLWDIMVGIGF------ 95
F +++ A+ + +++ + T+T L V +G
Sbjct: 146 FIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWI 205
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L PN++ Y+ ++ C VD M P +Y ++ L
Sbjct: 206 LHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALY 265
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
K ++ EVE + +M+ P + T + E A++I I +NG
Sbjct: 266 KENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNG 319
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + R + +A +M+ E P F+ ++ + + H + L++ M
Sbjct: 688 YNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMN 747
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
G L P+ I YNA++ LC + + M G FP+ +Y + +CL +
Sbjct: 748 ADG--LAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCAS 803
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A + F M ER + V Y + + L + +A + +R M +
Sbjct: 183 GSCKIGLVNDAVELFDRM-ERDGVRADAV-TYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D+ VK + ++L++ M + P++ YN+++ LC + VD
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEA 298
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G PD +TYN + K+K+V E F EM + + T I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A P+ A EI++ + P + ++LL GL
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 2/226 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L R + AL + M P + S+ ++ + N + L M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+GF P++++YN ++ C V++ FD+M G D++TYN + L +
Sbjct: 166 EEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M+ + P + I + + + A++++ + + P + N
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL GR+ + ++ + M+ + L VT L F R
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 32/232 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA K + EM R +P+ V Y + + L +VDEA + L +M + C P
Sbjct: 256 KEGKFSEAMKLYEEMTRRC-VDPD-VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIG---------------------------FN 96
+ ++ ++ K +L+ M G F+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 97 LM---PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
M PN+ Y+ ++ LC N V+ F+ M D TYN++ + K V
Sbjct: 374 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + F + +P ++ T I+ + + + ++ + E+G+LPL
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P+++ ++ V+ + + + D V F M G D +YN++ CL + + +
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 158 FFHEMIKNEWQPTPLNCAT-------------AITMLLDADEPEF--------------- 189
+M+K ++P + ++ AI ++ +E F
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 190 -------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A+E+++ + +G+ + N L+ GL GR SD R +M+ R I+ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 243 TMQKLKKAFYNESR 256
T + F E +
Sbjct: 246 TFTAVIDVFVKEGK 259
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A EM+ER P+ ++ Y + + R +D A + L +MK P +
Sbjct: 307 NVHKAMGLLDEMLER-NLVPD-LITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ +D L K N +L+D + G + N+IMY+ ++ C VD F++
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVS--ANVIMYSVLIDGYCKVGKVDEAGCLFEK 422
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ P++ T+N + L + E + F +M+K +PT I +L +
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
+ A + ++ +G P+ + N + + G++ + +M + D T
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542
Query: 247 LKKAF 251
L KA+
Sbjct: 543 LIKAY 547
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +V A + F EM R E ++Y + L ++DEA+ MK + C
Sbjct: 236 GYCRSKDVDSAFRVFEEMPNRNE------VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCC 289
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG----------- 109
+P + ++ + L + N + L D M + NL+P+LI YN+++
Sbjct: 290 YPNVYTYTALIKGLCRKN-VHKAMGLLDEM--LERNLVPDLITYNSLIAGQCRAGHLDSA 346
Query: 110 ------------------------LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
LC +N V+ R FD + G + + Y+++ +
Sbjct: 347 YRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDG 406
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K KV E F +M+ P I L A + A+ +++ +++ G+ P
Sbjct: 407 YCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPT 466
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ N+L+ + G D + ++M++
Sbjct: 467 VYTFNILIGRMLKQGDFDDAHKCLQKMMS 495
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 4/153 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y ++ +C ++ + DQM G P + +N + C K +K E N
Sbjct: 634 PDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANI 693
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+MI + P +C T I L + E E ++ + G E + +L+ G+
Sbjct: 694 VEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLK 753
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
G + + + EEM N Y + QKL
Sbjct: 754 QGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 95 FNLMPNL--IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
F MPN + YN ++ LC +D F +M +P+ TY + + L + K V
Sbjct: 250 FEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNV 308
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
H+ EM++ P + + I A + A + + + E G++P + +
Sbjct: 309 HKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCF 368
Query: 213 LVGLRNLGRLSDVRR----FAEEMLNRRILIYDV 242
+ L R+ + RR EE ++ +++Y V
Sbjct: 369 IDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWN-PE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ G V EA++ F +M E P+ +V+ + L + ++EA + MK F
Sbjct: 266 RAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNF 325
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
+L+ ++ L L++ + D MV G PN+ YN V+ LC N+ + +
Sbjct: 326 VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIE--PNIYSYNIVMDGLCRNHMMLDAR 383
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R D MV +G +PD++TY + KV E + +EMI+ P C T + L
Sbjct: 384 RLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A E+ + E + N+++ GL G L EM
Sbjct: 444 WKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 45/254 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F EM+ + +P+ V Y+TF++ + ++ AL+ L+ M+ C
Sbjct: 534 GLCKVGKLEEAKKKFIEMMAK-NLHPDSV-TYDTFVLNFCKQGKISSALRVLKDMERNGC 591
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
TL+ YN+++ L + + +
Sbjct: 592 SKTLQ-------------------------------------TYNSLILGLGSKGQIFEM 614
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAIT 179
+ D+M G PD TYN + CL + K + + HEM+ K P + I
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL- 238
+ + + A E+++ L + EA +++ L G+LSD + E L R +L
Sbjct: 675 AFCKSGDFKVACELFDVAL-SVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLS 733
Query: 239 ---IYDVTMQKLKK 249
+Y+ + KL K
Sbjct: 734 KNFMYEDLIDKLCK 747
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 19/234 (8%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK-LNDSTHT 83
NPE + + +L +D A + M + C P KF + ILV+ + T
Sbjct: 148 NPE-TYTFNLLIQSLCESNALDHARELFDKMSEKGCQPN-KF---TVGILVRGFCRAGRT 202
Query: 84 VQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
Q + + G +G N+ N ++YN +V C + D + ++M G PD +T+N
Sbjct: 203 KQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSR 260
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE--- 199
L + KV E F +M + P ++L E +E ++E
Sbjct: 261 ISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMK 320
Query: 200 --NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL 247
+ LE S N L+GL G+L + R +EM+ I Y++ M L
Sbjct: 321 KGGNFVSLE-SYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 2/229 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW-D 88
+ Y T + + + DEA K + M + P + F++ + L + +++ D
Sbjct: 220 VVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRD 279
Query: 89 IMVGIGFNL-MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ + L PN++ +N ++ C ++ + M G F +YN L+
Sbjct: 280 MQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLL 339
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+N K+ E + EM++N +P + + L A + + ++ NG+ P
Sbjct: 340 RNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTV 399
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ LL G + G++ + + EM+ + T L + + E R
Sbjct: 400 TYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 35 FLITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
L T+IRG ++ A + +M + C P + +S + L KL V++ D M
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G PN++ Y+ ++ C N D+ DQM+ G +S YN I L K+
Sbjct: 375 EEKG--CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ + EM +P T I L + D E A I+ ++E G++ + N
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES---RSM 258
L+ L GR + R A EML + ++ L KA E RSM
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 11/242 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + L R + +AL LR M C P + + LV
Sbjct: 174 PPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAM 233
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M+ +G N +N +V LC V R D+M+ G P +TY + +
Sbjct: 234 LLDEMLLMGCAADVN--TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQG 291
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + ++ E + E LN T I L + A E++ + G P
Sbjct: 292 LCRTRQADEACAMLGRL--PEVNVVMLN--TVIRGCLTEGKLARATELYEMMGSKGCPPD 347
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF-----YNESRSMRD 260
+ ++L+ GL LGR R +EM + VT L +F ++++R+M D
Sbjct: 348 VHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 407
Query: 261 RF 262
+
Sbjct: 408 QM 409
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A + EM E+ +++ Y T L + R D+A L M +
Sbjct: 357 GLCKLGRFGSAVRMLDEMEEK--GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ + L K +L M G P++ YN ++ LCNN+ ++
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCK--PDICTYNTMIYHLCNNDLMEEA 472
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ G + +TYN + L++N + E EM+ + Q ++ I
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR---- 236
L + ++ + ++ GI P S N+L+ L G++ D ++EMLN+
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592
Query: 237 ILIYDVTMQKLKKAFYNES 255
I+ Y+ + L K + +
Sbjct: 593 IVTYNTLINGLCKVGWTHA 611
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + K +M++R + NP +V+ + + + ++ ++ EA + + M
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKR-KINP-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N Q+ D+MV G + PN+ +N ++ C N +D+
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD--PNIRTFNILINGYCKANRIDDG 422
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G D++TYN + + + K++ + F EM+ + P + +
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDV 225
L D E E A+EI+ I E + L+ N+++ G+ N ++ D
Sbjct: 483 LCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G EA +MVE + P V Y L + + Q A++ LR M+ N
Sbjct: 202 GLCLSGKEAEAMLLIDKMVE-YGCQPNAV-TYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+S +D L K + L++ M G + N+I YN ++G CN D+
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG--ITTNIITYNILIGGFCNAGRWDDG 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ P+ +T++++ + +K K+ E E EMI P + + I
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++ + ++ G P + N+L+ G R+ D +M R ++
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 241 DVTMQKLKKAF 251
VT L + F
Sbjct: 438 TVTYNTLIQGF 448
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P FS ++ L + ++L D MV +G P+LI N +V LC +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGKEAEAM 213
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+MV +G P+++TY + + K+ + +M + + + + I L
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++N + GI + N+L+ G N GR D + +M+ R+I
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 242 VTMQKLKKAFYNESR 256
VT L +F E +
Sbjct: 334 VTFSVLIDSFVKEGK 348
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + + + KQ D L + M+ + L S ++ +
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ +G+ PN I ++ ++ LC V D+MV G PD +T N + L
Sbjct: 148 KIIKLGYE--PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K E +M++ QP + + ++ + + A+E+ + E I
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++++ GL G L + EM + I +T L F N R
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 39/254 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG V EA + MVE P+ ++ T + L + EA+ + M C
Sbjct: 167 GLCLEGRVSEALELVDRMVE-MGHKPD-LITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + L+++ K + ++L M N+ + + Y+ ++ LC + +DN
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F++M G + +TYN++ + + +MIK + P +
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT------- 335
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
F++ I +++ E G+L + +EM++R I
Sbjct: 336 --------FSVLIDSFVKE--------------------GKLREAEELHKEMIHRGIAPD 367
Query: 241 DVTMQKLKKAFYNE 254
+T L F E
Sbjct: 368 TITYTSLIDGFCKE 381
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TLI+G +++ A + + M P + + LD L +S +++++ +
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
L ++ +YN ++ +CN + VD+ + F + G P TYN++ L K +
Sbjct: 503 KMEL--DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 154 EVENFFHEMIKNEWQP 169
E E F +M ++ P
Sbjct: 561 EAELLFRKMEEDGHAP 576
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 6/185 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F EMV R P +++ Y+ L L + ++AL+ ++
Sbjct: 447 GFCELGKLNVAKELFQEMVSR--KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ I+ + +++ WD+ + + P + YN ++G LC +
Sbjct: 505 ELDIGIYNI---IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD TYN++ + + + E+ + + I
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 180 MLLDA 184
ML D
Sbjct: 622 MLSDG 626
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C + VD
Sbjct: 206 VYTYSVLINGLCKESKLDDANELFDEMLDNG--LVPNSVSFTTLIDGHCKDGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L KN + + ++ +EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKLDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+S+++ + + K+ +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ N + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C ++ FD + G P +++N + IK ++E
Sbjct: 135 SLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+ M + QP + I L + + A E+++ +L+NG++P S L+ G
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKD 254
Query: 220 GRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 255 GRVDLAMEIYKQMLSQSL 272
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ L L + ++ +A++ + +M P ++ ++ L K + + +QL +
Sbjct: 97 VVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVE 156
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G+ N + YN +V LC + +++ +F D+++ G P++ TY+ + E K
Sbjct: 157 KMEDSGYP--ANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYK 214
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ V+E E+I QP ++ +T L E AI ++ + G P S
Sbjct: 215 ERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVS 274
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKAFYNE 254
N+LL L GR + EM R I+ Y++ + L AF+ +
Sbjct: 275 YNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSL--AFHGK 322
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
K GNV A ++VE+ E + P + + Y T + L ++++L+FL + +
Sbjct: 144 KRGNVGYAM----QLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLV 199
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P +S+ L+ K ++L D ++ G PNL+ YN ++ LC ++
Sbjct: 200 PNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQ--PNLVSYNVLLTGLCKEGRIEEAI 257
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R F + G P+ ++YN++ L + E EM E P+ + I L
Sbjct: 258 RLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSL 317
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ E A+++ + ++ P S N ++ L G++ V ++M+ R
Sbjct: 318 AFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGR 372
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 94/244 (38%), Gaps = 34/244 (13%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG EAN+ EM R E +P ++ Y + +L ++++AL+ + M PT
Sbjct: 285 EGRWEEANELLAEMNGR-ERSPS-IVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTA 342
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIM-----------------------VGIGFNLMPNL 101
++ + L K V D M V F+L+ +L
Sbjct: 343 TSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSL 402
Query: 102 I---------MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
Y VV LC + F +M +G PDS TY+ + L +
Sbjct: 403 GNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGML 462
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+E F + ++ ++P N I + + ++E++ ++E G P E + +L
Sbjct: 463 YEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTIL 522
Query: 213 LVGL 216
+ G+
Sbjct: 523 VEGI 526
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V EA + E++ + ++++Y L L + +++EA++ + + + P
Sbjct: 214 KERGVNEAMRLLDEIIAK--GGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPN 271
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L +L M G P+++ YN ++G L + ++ +
Sbjct: 272 VVSYNILLRSLCYEGRWEEANELLAEMNG--RERSPSIVTYNILIGSLAFHGKIEQALQV 329
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D+M+ P + +YN I L K KV V N +MI P
Sbjct: 330 IDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSP 375
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
Y + L + + V+EA++ L + + P L ++ L L K ++L+
Sbjct: 202 AFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFK 261
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ GF+ PN++ YN ++ LC + +M P +TYN++ L
Sbjct: 262 NLPSKGFS--PNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAF 319
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K+ + EM+ ++PT + I L + E + + ++ P E +
Sbjct: 320 HGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGT 379
Query: 209 ANVLLV 214
N + V
Sbjct: 380 FNAIAV 385
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G VE F M+ + +V Y + + + + EA+ + MK E
Sbjct: 328 GLCKDGKRVEGYTVFENMISK--GCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGL 385
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L K ++ + G G + N + Y++++ L + VD
Sbjct: 386 EPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAV--NAMFYSSLIDGLGKSGRVDEA 443
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F +MV G PDS YN + + L K K+ E M + T IT
Sbjct: 444 ERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITG 503
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L E A+ +W+ +++ GI P A+ L GL G+++ + +EM
Sbjct: 504 LFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEM 555
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V EA + F EMV++ P Y + L + ++DEAL + M+ + C
Sbjct: 433 GLGKSGRVDEAERIFYEMVKK--GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGC 490
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L + + + + LWD+M+ G + P + A+ LC + V
Sbjct: 491 DQTVYTYTILITGLFREHRNEEALTLWDLMIDKG--ITPTAAAFRALSTGLCLSGKVARA 548
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ D+M G P++ +MI L K ++ E
Sbjct: 549 CKILDEMAPMGVIPETAFDDMI-NILCKAGRIKEA 582
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 5/232 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ EA F M ++ P+ V Y + +L + ++DEAL+++ G+
Sbjct: 366 KCGNMGEAMLLFKRM-KKEGLEPDEV-TYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVN 423
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+S+ +D L K +++ MV G P+ YNA++ L +D
Sbjct: 424 AMFYSSLIDGLGKSGRVDEAERIFYEMVKKG--CPPDSYCYNALIDALAKCGKIDEALAL 481
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M G TY ++ L + + E + MI PT T L
Sbjct: 482 SKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCL 541
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + A +I + + G++P A +++ + L GR+ + + A+ +++R
Sbjct: 542 SGKVARACKILDEMAPMGVIPETAFDDMINI-LCKAGRIKEACKLADGIVDR 592
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 3/227 (1%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
+E+ + E++E + P+ V+ Y T + + +A + L+ M+ N P +
Sbjct: 230 IESAERVFEVMENGKIGPD-VVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYM 288
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ D + L+ M G + P++ Y+ V+G LC + + F+ M+
Sbjct: 289 TLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV--YSLVIGGLCKDGKRVEGYTVFENMI 346
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G + Y + + K + E F M K +P + + L + +
Sbjct: 347 SKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLD 406
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A+E + G+ + L+ GL GR+ + R EM+ +
Sbjct: 407 EALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKK 453
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + +P+ V+ + T L L +V EAL F M C P + F+
Sbjct: 133 ALSTFGK-ITKLGLHPD-VVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTL 190
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D M+ G L P I Y +V +C D + +M V
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDG--LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + +N F EM
Sbjct: 249 SH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM-------------------------- 281
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
E GI P + N ++VG + GR SD + +EML R+I VT L
Sbjct: 282 ---------QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 249 KAFYNESR 256
AF E +
Sbjct: 333 NAFVKEGK 340
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA + + EM+ R + + Y + + + ++D A +M + C P
Sbjct: 337 KEGKFFEAAELYDEMLPR--GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D ++L M G L+ N + YN ++ C D++
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRG--LVANTVTYNTLIHGFCLVGDLNAALDL 452
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ G PD +T N + + L N K+ + F M K++ M LD
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK-------------MDLD 499
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A P NG+ P + N+L+ GL N G+ + EEM +R I+ +T
Sbjct: 500 ASHPF-----------NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 548
Query: 244 MQKLKKAFYNESR 256
+ +SR
Sbjct: 549 YSSMIDGLCKQSR 561
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG +VEA M+E P + Y T + + + AL LR M+ +
Sbjct: 193 GLCREGRIVEAVALLDRMMED-GLQPTQI-TYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN+++ C++ +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG--IFPDLFTYNSMIVGFCSSGRWSD 308
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +M+ PD +TYN + +K K E + EM+ P + + I
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 368
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
D + A +++ + G P + L+ G R+ D EM R ++
Sbjct: 369 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 428
Query: 240 YDVTMQKLKKAF 251
VT L F
Sbjct: 429 NTVTYNTLIHGF 440
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+ V A +M E P +V+ Y + +L + + +A M+ +
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L +++ + + QL M + + P+++ YNA++
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TYN + + K ++ E+ F+ M P T I
Sbjct: 345 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 404
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +E+ + + G++ + N L+ G +G L+ +++M++ +
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
VT L + + ++D + + K+
Sbjct: 465 IVTCNTLLDGLCDNGK-LKDALEMFKAMQKS 494
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 16/253 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + A F M + +P+ V + T + K++D+ ++ L M
Sbjct: 369 GFCKQDRLDAAEDMFYLMATK-GCSPD-VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ + + D + L M+ G + P+++ N ++ LC+N + +
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG--VCPDIVTCNTLLDGLCDNGKLKDA 484
Query: 121 FRFFDQM-----------VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M F+G PD LTYN++ LI K E E + EM P
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ ++ I L + A +++ + P + N L+ G GR+ D
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 604
Query: 230 EEMLNRRILIYDV 242
EM RR ++ D
Sbjct: 605 CEM-GRRGIVADA 616
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YN ++ L N +++M G PD++TY+ + + L K ++ E
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + P + T I A + +E++ + GI+ L+ G R
Sbjct: 569 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 628
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+G ++ +EM++ + +T++ + F+++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 664
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F + ++V++ + L+ M + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK--QIRCDIY 115
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ C+ + + F ++ G PD +T+ + L +V E +FFH+M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ +P + T + L A+ + + ++E+G+ P + + ++ G+ G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y + LI + EA + M P +S+ +D L K + Q++
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 570
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ +N ++ C VD+ F +M G D++ Y + K
Sbjct: 571 SMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 628
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T +E E A+ +
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 673
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F E + ++ P V+++ T + IR +DE + M G P
Sbjct: 148 KEGEMRLAQSVFDE-ITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+G G L+PN + + ++ C +D
Sbjct: 206 VYTYSVLINGLCKESKMNDANELFDEMIGNG--LVPNGVTFTTLIDGHCKTGSIDLAMEA 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ G PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A + +++ I + + L+ GL G+ + EML+
Sbjct: 324 EGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLS 374
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G G + P++ Y+ ++ LC + +++
Sbjct: 169 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSG--IQPDVYTYSVLINGLCKESKMNDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + K + + EM++ + P + T I L
Sbjct: 227 ELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L ++ + M+ I + D
Sbjct: 287 CKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E +S+
Sbjct: 347 VAYTALISGLCREGQSV 363
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EMI +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL + +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ ++D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLTDEM 302
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
A+ R + + FPT+K + L LVK N+ + +++ M + P++ +++
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ---GVSPDVYLFSTA 319
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ C V++ + F M G P+ +TYN + L K+ + E F +M+K+
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
T + + I L+ ++ A + LE G P E N L+ G +G L D R
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 228 FAEEMLNRRILIYDVTMQKLKKAF 251
+M+++ I VT+ + + F
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGF 463
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 39/288 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V +A + F +M E+ +P +V+ Y + L + +DEA +F M + T
Sbjct: 325 KGGKVEDAIQLFFDM-EKLGVSP-NVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L +S ++ L+KL + + GF PN ++YN ++ C ++ + R
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFT--PNEVVYNTLIDGYCKMGNLGDALRI 440
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI----- 178
MV G P+S+T N I + K ++ + E EM+ + P T I
Sbjct: 441 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500
Query: 179 ------------TMLLDADEP------------------EFAIEIWNYILENGILPLEAS 208
MLL P A+E+W +LE G +
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 560
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N L+ GL G + + R ++ML R ++ +T L E +
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 112/307 (36%), Gaps = 72/307 (23%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G + +A EM+ R F NP A+ T + L + + AL+FLR M N
Sbjct: 462 GFCKIGQMEQAECILEEMLSRGFSINPG---AFTTIIHWLCMNSRFESALRFLREMLLRN 518
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMP------------------ 99
P + + L K + V+LW ++ G G NL+
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 100 -------------NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ I YN ++ C V+ F+ +MV G PD+ TYN++ +
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL-------- 198
+ K+ E N ++E + P I AD+ E +++ +L
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698
Query: 199 ---------------------------ENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
GI P A+ + L+ G+ N+GR+ D + +E
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758
Query: 232 MLNRRIL 238
M +L
Sbjct: 759 MRKEGLL 765
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 15/264 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K GN+ EA + +M+ER F + + Y T + + +V+E K M +
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFVLDK---ITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ + + ++ V LW+ +L+PN+ Y ++ C + ++
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS--RDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F +++ +S+ YN + +N E +M PT ++ I
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + E A + + + + G+LP L+ G LG++ V +EM +
Sbjct: 742 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS----- 796
Query: 240 YDVTMQKLKKAF----YNESRSMR 259
YD+ K+ Y++S M+
Sbjct: 797 YDIHPNKITYTVMIDGYSKSGDMK 820
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 39/266 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V E K GEMV++ P+ Y + + R ++DEA+ K +
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQ-GIEPD-TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659
Query: 61 FPTL--------------------KFFSNALDILVKLN---------------DSTHTVQ 85
P + K F+ L ++LN ++ +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M G + P Y++++ +CN +++ D+M G P+ + Y +
Sbjct: 720 LHDDMRSKG--IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 777
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K ++ +V N EM + P + I + + + A ++ + ++ GI+P
Sbjct: 778 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEE 231
+ NVL G G++ + + AE+
Sbjct: 838 TVTYNVLTNGFCKEGKIEEGKLLAED 863
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALSVLNGMIKSGCKPNVHV--YNTLINGLAGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q++ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+T
Sbjct: 372 PTKIT 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F + +D++L L + + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGF-----------------CKNGYIDKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + + + + M+ G PN+ +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCK--PNVHVYNTLINGLAGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L KN+ E N E++ P + + +
Sbjct: 183 AIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN ++ G P N+L+ GL ++G++ +M +
Sbjct: 243 GLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAP 302
Query: 240 YDVTMQKLKKAFYNES 255
V+ L + FY +
Sbjct: 303 NLVSHNTLMEGFYKDG 318
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G A + F M +R Y L L V EA+ M + C
Sbjct: 118 GYCRTGLFAHACRLFLLMPQR--GCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGC 175
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + L + V L +G GF +PN+ +YNA++ C+ D++
Sbjct: 176 APDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGF--VPNVAVYNALIDGYCSTGDLELA 233
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M G P+ TY + K+ KV + MI+ P + T I
Sbjct: 234 IDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQG 293
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A + + + G+ P E + VL+ L GR+ + ++F ++ + I +
Sbjct: 294 QCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVN 353
Query: 241 DVTMQKLKKAFYNESR 256
V + A +
Sbjct: 354 QVIYTSMIDALCKSGK 369
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/241 (17%), Positives = 100/241 (41%), Gaps = 7/241 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + ++ A+ + M+ + C P ++ ++ + K + L+
Sbjct: 214 VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYS 273
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G L PN++ Y ++ C+ +++ FR M G P+ T ++ + L K
Sbjct: 274 RMIEAG--LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ E + F +++ + + + I L + + + A + I+ G +P
Sbjct: 332 HGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKAFYNESRSM-RDRFD 263
+ L+ GL +L + +M+ + + + + + K + F ++S M DR
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMA 451
Query: 264 S 264
+
Sbjct: 452 A 452
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 10/213 (4%)
Query: 4 KEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K G + EA + G +V++ + N + Y + + L + + D A ++ + E P
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQ---VIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP 387
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+S+ +D L + N + L + M+ G+ N +P I+ + + D+
Sbjct: 388 DAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL----REFRSDSP 443
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M G PD +TY + ++ ++ + E+ +MI + +P T I
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ A +++NG P + S VLL
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ +A T E +E F P + + + + K++D+A ++++ M +
Sbjct: 395 GYCRIGDMNKAILTI-ERMESFGLRPNSI-TFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+++ ++ +D KL Q+ + M IG + PN++ Y +++ LC + +
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG--VKPNVVSYGSLINCLCKDGKILEA 510
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G P++ YNM+ + KV + FF EM+++E PT + I
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L + A + I +G P + N L+ G N G +S E M N I
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + ++ + + ++FL M+ P + ++ + L + +++D M
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMC 238
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
I NL+ +++ YN ++ C ++D F+ ++M P+ +T+N + L K +K
Sbjct: 239 NI--NLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ E + EM N + P + LL D+ A+E++ E GI + ++
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNR 235
LL GL G++ AEE+L +
Sbjct: 357 LLNGLCKQGKVEK----AEEILKK 376
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G + EA + F + +P+ V+ Y + + V + L MK
Sbjct: 570 GLCKKGKLTEA-EDFLTQITSSGHSPD-VITYNSLISGYANAGNVSKCLGLYETMKNLGI 627
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT++ + + K + V+ L++ M+ + NL+P+ ++YNA++ +
Sbjct: 628 KPTVRTYHPLISGCSK--EGIELVEKLYNEMLQM--NLLPDRVVYNAMIHCYAEIGNTQK 683
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ M+ G PD +TYN + + K+ +++ + M E P +
Sbjct: 684 AYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
D + A + ++EN LP + N L GL GRL +V+ EM
Sbjct: 744 GHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
F L PN I +N+++ C+ ++D + +M G P TYN + + K
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLL-DADEPEFAIEIWNYILENGILPLEASANVLL 213
+M + +P ++ + I L D E I + + I G+LP N+L+
Sbjct: 475 CFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR-GVLPNAQVYNMLI 533
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKK 249
G +G++ D RF +EM+ I + Y+V + L K
Sbjct: 534 DGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573
>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 376
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A M++ HV Y + L+ + ++A++ LR M +
Sbjct: 138 GLCKEAKLDKAVSVLNGMIKSGCKPNAHV--YNALINGLVGASKFEDAIRVLREMGTTHF 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +S ++ L K L M+ G N P++I Y+ ++ LC + V+
Sbjct: 196 SPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLN--PSVITYSLLIKGLCLDCKVEKA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ ++Q++ G PD +N++ L K+ + + M N W P N T T+
Sbjct: 254 FQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYFNM--NRWDCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW I+ NG+ P S N+ L GL + R+S F + + ++
Sbjct: 311 MEGFYKDGDFRN-ALVIWARIMRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVCKK 369
Query: 237 ILIYDVT 243
I++ +T
Sbjct: 370 IVLTVIT 376
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F N ++++L L + + +
Sbjct: 82 WELMKESGYVEDSITYGILVHGFCKNG-----------------YLNKSLHVLEIAERKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K V + + M+ G PN +YNA++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCK--PNAHVYNALINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M P +TY+ + L K ++ E + EM+ P+ + + I
Sbjct: 183 AIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E A ++WN ++ G P N+++ GL ++G++
Sbjct: 243 GLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKM 285
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 3/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+ V E + MV+ P+ V Y T + L + D+AL FLR + +
Sbjct: 349 KDRKVEEVKRLMENMVQNSNLIPDQV-TYNTLIYALSKHGHADDALVFLREAEEKGFHID 407
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S +D K + L M G N P+++ Y A++ C +D +
Sbjct: 408 KVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCN--PDVVTYTAIIDGFCRVGKIDEAKKM 465
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM HG P+++TY ++ L N K E + ++ W P + + + L
Sbjct: 466 LQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRR 525
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A ++ ++E G LP N+L+ L + +++ EE L++
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHK 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
E +PE A+ +++ R + AL+ L +M+ P L + A+ +LVK N
Sbjct: 228 IERSPE---AFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLE 284
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
++ + M G P+++ YN ++ C+ + +D+ +M F G PD ++Y
Sbjct: 285 KALRFLERMKVAGIE--PDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYT 342
Query: 142 IFECLIKNKKVHEVENFFHEMIKNE 166
+ L K++KV EV+ M++N
Sbjct: 343 VMAFLCKDRKVEEVKRLMENMVQNS 367
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 3/218 (1%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM-KGENCFPTLKFFSNALDILVKLNDS 80
F+ P ++Y T + L + ++V+E + + M + N P ++ + L K +
Sbjct: 330 FKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHA 389
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ GF++ + + Y+AVV C N ++D M G PD +TY
Sbjct: 390 DDALVFLREAEEKGFHI--DKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYT 447
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
I + + K+ E + +M K+ +P + + L + A E+ N E+
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEH 507
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + ++ GLR G+LS+ EM+ + L
Sbjct: 508 WWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFL 545
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 20/181 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G G +EA + + E W P + + Y + L R ++ EA R M KG
Sbjct: 487 GLCHNGKSLEAREMIN-VSEEHWWTP-NAITYSAVMHGLRREGKLSEACDLTREMIEKG- 543
Query: 59 NCFPTLKFFSNALDI------LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
F N +DI L + + + + + G + N++ + +V+ C
Sbjct: 544 -------FLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAV--NVVNFTSVIYGFC 594
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
D+D + M PD++TY +F+ L K ++ E +M+ PTP+
Sbjct: 595 QIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPV 654
Query: 173 N 173
Sbjct: 655 T 655
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 106/281 (37%), Gaps = 41/281 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K N+ +A +M + NP+ V+ Y + R ++DEA K L+ M C P
Sbjct: 420 KNKNIDKAKSLVIDMYSK-GCNPD-VVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPN 477
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ L+ L S ++ I V PN I Y+AV+ L +
Sbjct: 478 TVTYTVLLNGLCHNGKSLEAREM--INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDL 535
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI----- 178
+M+ G P+ + N++ + L +N+ V + + E + +N + I
Sbjct: 536 TREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQ 595
Query: 179 --------------------------TMLLDA----DEPEFAIEIWNYILENGILPLEAS 208
T L DA + A E+ +L GI P +
Sbjct: 596 IGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVT 655
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRIL--IYDVTMQKL 247
++ GR+ D+ + E+M+ R+ +Y+ ++KL
Sbjct: 656 YRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKL 696
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 7/180 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NVV A K E + + +V+ + + + + +D AL L M N P
Sbjct: 563 NVVGAKKYLEECLHK--GCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT 620
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ D L K + +L M+G G + P + Y AV+ C VD++ + ++
Sbjct: 621 YTTLFDALGKKSRLDEASELIVKMLGKGID--PTPVTYRAVIHRFCQWGRVDDMMKLLEK 678
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-TMLLDAD 185
M+ F YN + E L E E ++++ + C I + L+D +
Sbjct: 679 MIARQPF--KTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGN 736
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 5/257 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
W N+VEA + + EM+E P+ V+ + T + L+RG++ EA+K +MK +
Sbjct: 333 AWCNARNLVEAGRVWNEMLEN-GLKPD-VVVHNTMIEGLLRGQRRPEAVKMFELMKAKGP 390
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ ++ M +G P++ Y ++ N +D V
Sbjct: 391 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVG--CQPDVATYTCLLVGYGNAKRMDRV 448
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
++M G PD TYN + + L + + +MIK +PT + +
Sbjct: 449 TALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 508
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L +W + GI P S V + G GR + ++ EEM+ + +
Sbjct: 509 YFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKT 568
Query: 240 YDVTMQKLKKAFYNESR 256
+ K F +
Sbjct: 569 PQIDYNKFAADFSKAGK 585
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG EAN+ F M +R+ + + +Y ++ + + EA + M P
Sbjct: 302 QEGLGREANQVFDRMRDRYAPD---LRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPD 358
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ L++ V+++++M G PN+ Y ++ C +D R
Sbjct: 359 VVVHNTMIEGLLRGQRRPEAVKMFELMKAKG--PAPNVWTYTMLIRDHCKRGKMDMAMRC 416
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M G PD TY + K++ V EM + P I +L +
Sbjct: 417 FEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTN 476
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLL----VGLRN 218
+ P+ A I+ +++ G+ P + N+++ +G RN
Sbjct: 477 RNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRN 515
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + L + VD A+ L MK C P + ++ L L +L
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G +P+ + +N ++G LC + + F QM G P+S+TY+ I L
Sbjct: 401 DNMTQNGC--LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+ + F+EM + P + A L D D E AI+ + ++GI P
Sbjct: 459 KATKLDQALELFNEMGHKGFNPDKIYQLLA-ECLNDDDTIEEAIQTVRKLQDSGISPHTV 517
Query: 208 SANVLLVGLRNLGR 221
N +L+GL G+
Sbjct: 518 LYNAILLGLCRNGK 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 17/257 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + +A + G M + + Y + TL QV +AL L M C
Sbjct: 144 GYCRAGRLGDARRVVGGMPVQ-----PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGC 198
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ K ++L D+M G PN + YN ++ +C DVD+
Sbjct: 199 APDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCT--PNNVTYNVLMDGMCGEGDVDDA 256
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ HG P ++ YN + + L ++ + + EM++ P I
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL---RN----LGRLSDVRRFAEEML 233
L + AI++ + ++G + N ++ GL RN +G LS ++ +
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG---C 373
Query: 234 NRRILIYDVTMQKLKKA 250
I+ Y+ ++ L A
Sbjct: 374 KPDIVTYNTLLKGLCSA 390
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 14/237 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVM 55
G EG+V +A +E P H + Y T L L ++ +A + + M
Sbjct: 246 GMCGEGDVDDA-------LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 298
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
ENC P F+ + L + +QL + M G N++ YNA++ LC
Sbjct: 299 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA--NIVTYNAIINGLCEQR 356
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+VD +M +G PD +TYN + + L + + E M +N P +
Sbjct: 357 NVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFN 416
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T I L AIE++ + + G P + + ++ GL +L EM
Sbjct: 417 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A++ EM+ E P + + + +L R + +A++ L M C + ++
Sbjct: 290 DADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 347
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ L + + + L M G P+++ YN ++ LC+ + D M
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCK--PDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+G PD++T+N + L + + + F +M P + +T I+ L A + +
Sbjct: 406 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465
Query: 190 AIEIWNYILENGILP 204
A+E++N + G P
Sbjct: 466 ALELFNEMGHKGFNP 480
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGENCF 61
++G +V+A + F +M ++ P + Y T + L + ++D+AL+ M KG N
Sbjct: 424 QKGLMVDAIEVFKQMPDKG-CTPNSI-TYSTIISGLAKATKLDQALELFNEMGHKGFNPD 481
Query: 62 PTLKFFSNALDILVKLNDSTHTV-QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + L+ + ++ TV +L D + P+ ++YNA++ LC N +
Sbjct: 482 KIYQLLAECLNDDDTIEEAIQTVRKLQD------SGISPHTVLYNAILLGLCRNGKTEFA 535
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
MV G PD LTY ++ E L ++E ++ +
Sbjct: 536 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 581
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 4/244 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G V +A +M+ R P+ V+ Y L +G+ +A++ + +M+ E C P
Sbjct: 179 ERGQVRDALSVLDDMLCRG-CAPD-VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPN 236
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D + D ++L + G P+ + YN V+ LC+ +
Sbjct: 237 NVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK--PSTVNYNTVLKGLCSAERWGDADEL 294
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ P+ T+N++ L + + + +M K+ + I L +
Sbjct: 295 VTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCE 354
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+ + + + G P + N LL GL + + D + M L +VT
Sbjct: 355 QRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVT 414
Query: 244 MQKL 247
L
Sbjct: 415 FNTL 418
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 5/206 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +VVEA K F E P+ V +Y +I + ++DEAL M +
Sbjct: 332 GYCLYNDVVEARKLFDTFAE-CGITPD-VWSYNILIIGYCKNNRIDEALSLFNKMNYKKL 389
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D L K ++ +L+ + G + PN+I YN ++ LC VD
Sbjct: 390 APNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPS--PNVITYNIMLDALCKIQLVDKA 447
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ M G P+ +YN++ K+K++ E N F EM + P + I
Sbjct: 448 IELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDG 507
Query: 181 LLDADEPEFAIEIWNYILENGILPLE 206
L + A E++N ++ +G P++
Sbjct: 508 LCKSGRISHAWELFN-VMHDGGPPVD 532
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 10/259 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEA--LKFLRVMKG 57
G+ G E + +MV+R N V Y + L + + +A ++ L + +G
Sbjct: 262 GFCGLGQWREVTRLLCDMVDRNVNLN---VYTYNILIDALCKKGMLGKAHDMRNLMIERG 318
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ P L F+ + ND +L+D G + P++ YN ++ C NN +
Sbjct: 319 QR--PDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG--ITPDVWSYNILIIGYCKNNRI 374
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D F++M + P+ +TY+ + + L K+ ++ F + P +
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L + AIE++N + E G+ P +S N+L+ G R+ + EEM R +
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494
Query: 238 LIYDVTMQKLKKAFYNESR 256
+ VT L R
Sbjct: 495 VPDSVTYNCLIDGLCKSGR 513
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 7/237 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + L ++++ K A+ + M P++ S ++ L +
Sbjct: 78 VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLG 137
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+++ G+ L N I ++ LC N +V F D +V G D +TY + L K
Sbjct: 138 MVLKRGYQL--NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
E H+M +P + + L A ++++ ++ GI P +
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL-KKAFYNESRSMRD 260
L+ G LG+ +V R +M++R + Y++ + L KK ++ MR+
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRN 312
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 2/227 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L + EA + L M+G+ P + ++ +D L K T L+
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+VG G + P++ Y ++ C V R MV + TYN++ + L K
Sbjct: 244 VVGRGID--PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + + + MI+ +P + T ++ ++ A ++++ E GI P S
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N+L++G R+ + +M +++ VT L R
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G + A + F + + P +V+ Y L L + + VD+A++ +M
Sbjct: 402 GLCKSGRISYAWELFSAI---HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ ++ K + L++ M NL+P+ + YN ++ LC + + +
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHR--RNLVPDSVTYNCLIDGLCKSGRISH 516
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ F+ M G D +TYN++F+ K + V
Sbjct: 517 AWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + L + +V E + MK + C P + +S + KL+ L+D M+
Sbjct: 48 YNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDML 107
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+P+++ + +V CN VD+ R +++V PD TY + + K K+
Sbjct: 108 KQA--ALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKR 165
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ E M K E QP + I A +P A ++ ++ NG+ P +
Sbjct: 166 MVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRS 225
Query: 212 LLVGLRNLGRLSDVRRFAEEM 232
L+ G G L + + E +
Sbjct: 226 LIGGFCGTGDLEEAHKMLERL 246
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN++ YN+++ C N VD+ ++M G PD TYN + + L K +V EV
Sbjct: 8 PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRL 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F EM P + + I D A +++ +L+ LP + L+ G N
Sbjct: 68 FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 127
Query: 219 LGRLSDVRRFAEEML 233
G + D R EE++
Sbjct: 128 AGLVDDAERLLEEIV 142
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 52/263 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFL------------------------ 36
G K G V E N+ FGEM +F NP+ V+ Y +
Sbjct: 54 GLCKTGRVPEVNRLFGEMKAKF-CNPD-VITYSCLIGGFCKLDRINMACTLFDDMLKQAA 111
Query: 37 -------ITLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
TL+ G VD+A + L + +C P + +++ +D K+ +
Sbjct: 112 LPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHR 171
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M PN+++Y A++ C+ ++ ++MV +G P+++TY +
Sbjct: 172 VLKRMAK--GECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGG 229
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCAT---AITMLLDA----DEPEFAIEIWNYIL 198
+ E + +NE NC A +++D A+E+ I
Sbjct: 230 FCGTGDLEEAHKMLERLERNE------NCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 283
Query: 199 ENGILPLEASANVLLVGLRNLGR 221
++G P L+ G L R
Sbjct: 284 QSGTPPRHDIYVALIRGEMTLSR 306
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + +++ + N T+ L + M G +P++ YN ++ LC V V
Sbjct: 8 PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATG--CLPDINTYNTLIDGLCKTGRVPEVN 65
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
R F +M PD +TY+ + K +++ F +M+K P + T +
Sbjct: 66 RLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGY 125
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+A + A + I+ + P + L+ G + R+ + R + M
Sbjct: 126 CNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNV 185
Query: 242 VTMQKLKKAFYNESR 256
V L AF + +
Sbjct: 186 VIYTALIDAFCSAGK 200
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 50/272 (18%)
Query: 6 GNVVEANKTFGEM-----VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GN+ +A F E+ + F +NP + L + ++ +EA+ F++ M C
Sbjct: 234 GNLEDALAYFDELDDSLDLTHFTFNP--------LVAALCKAERTEEAIAFVKKMSERRC 285
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FPTL +++ +D +KL + V GF +P+ + Y +++ LC V+
Sbjct: 286 FPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF--IPDAVTYTSIIDGLCKLGRVEEG 343
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN--------------- 165
F +M G PD++TY + + +K K + + + +M+++
Sbjct: 344 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 403
Query: 166 --------EWQPTPL-----NC-ATAIT--MLLDADEPE----FAIEIWNYILENGILPL 205
E T L C AT +T L+D E A+E++ +L+ G P
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
S N+++ GL G+L+ + E++L RR+
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ + V+ LC +D F ++ V G PD +TYN+ + L K ++V +
Sbjct: 39 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M + + PT + + LL A + A+ I ++E G P + V++ GL
Sbjct: 99 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSK 158
Query: 219 LGRLSDVRRFAEEMLN 234
GR+ + RR +ML
Sbjct: 159 AGRVEEARRIFVDMLG 174
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA +MVE+ N + Y + L + +V+EA + M G C
Sbjct: 120 GLLKAGRLDEAMAILEQMVEK--GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ + L K+ + + MV G + P+++++N V+ LC + +++
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 119 NVFRFFDQMVFHGAFPDSL-----TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ +FD++ DSL T+N + L K ++ E F +M + PT
Sbjct: 238 DALAYFDEL------DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFT 291
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + L + A+ +E G +P + ++ GL LGR+ + EM
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351
Query: 234 NR 235
NR
Sbjct: 352 NR 353
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + Q+D A+ L M C P + F+ ++ L + + + V G
Sbjct: 19 LCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCE-- 73
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + YN + LC VD+ F+ +M P ++TY + + L+K ++ E
Sbjct: 74 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAI 133
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+M++ PT I L A E A I+ +L NG P L+ GL
Sbjct: 134 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAK 193
Query: 219 LGRLSDVRRFAEEML 233
+G+L + + +M+
Sbjct: 194 IGKLDEALVYLNQMV 208
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 5/236 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A++ + +M++ + Y L L + +V EA M+ C
Sbjct: 368 GFMKAKMIPKAHRVYRQMLQ--SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 425
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ +S +D + + V+L+ M+ G PNL+ YN ++ LC +
Sbjct: 426 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE--PNLVSYNIIIRGLCRAGKLAKA 483
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKN-KKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ +F++++ PD T+N L + V + F M+ P + + +
Sbjct: 484 YFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A E +EI++ ++ G+ P N L+ L GR+ + E+ R
Sbjct: 544 GICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+++ +P+ V A+ + L R K++DEA L C P ++ +D L K
Sbjct: 31 LLDEMPCSPDMV-AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKA 89
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
QL M +P + Y A+V L +D +QMV G P
Sbjct: 90 ERVDDAFQLLKKMDEK--KCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLK 147
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY ++ + L K +V E F +M+ N +P I+ L + + A+ N +
Sbjct: 148 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQM 207
Query: 198 LEN----GILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+EN G+ P N+++ L G L D + +E+
Sbjct: 208 VENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 5/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V E + F EM R + P+ V Y + ++ K + +A + R M
Sbjct: 333 GLCKLGRVEEGCERFHEMRNR-GYEPDAV-TYAALIDGFMKAKMIPKAHRVYRQMLQSGT 390
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ LD L K + M G + ++ Y+A++ C+ +V
Sbjct: 391 VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG--CVATVVTYSALMDGFCSEGNVSAA 448
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M+ G P+ ++YN+I L + K+ + +F ++++ P + +
Sbjct: 449 VELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHG 508
Query: 181 LLDA-DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L D +E++ ++ G P S ++L+ G+ G L EM++R +
Sbjct: 509 LCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGV 566
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
A++ LC +D D+M PD + + ++ L + K++ E + ++
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+P + I L A+ + A ++ + E LP + L+ GL GRL +
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 225 VRRFAEEMLNR----RILIYDVTMQKLKKA 250
E+M+ + + Y V + L KA
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKA 159
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 11/254 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ A + G M P+ Y + L +V +AL L M C
Sbjct: 120 GYCRYGHLDAARRLIGSM----PVAPD-AYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 174
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ + + + + + D M G PN++ YN ++ +C VD+
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCT--PNIVTYNVIINGMCREGRVDDA 232
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+++ +G PD+++Y + + L +K+ +VE F EM++ P + I
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
E AI++ + E+G N+++ + GR+ D + +M N
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 237 ILIYDVTMQKLKKA 250
+ Y ++ L +A
Sbjct: 353 TISYTTVLKGLCRA 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + + + + P+ V +Y T L L K+ D+ + M +NC
Sbjct: 222 GMCREGRVDDARELLNRL-PSYGFQPDTV-SYTTLLKGLCASKRWDDVEELFAEMMEKNC 279
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ + M G N + N V+ +C VD+
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG--CATNTTLCNIVINSICKQGRVDDA 337
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ + M +G PD+++Y + + L + ++ + + +EM++N P + T I +
Sbjct: 338 FKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICI 397
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
L E AI + + E+G + N L+ G
Sbjct: 398 LCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 7/213 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V +A K +M + NP+ ++Y T L L R ++ D+A + L M NC P
Sbjct: 330 KQGRVDDAFKLLNDM-GSYGCNPD-TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPN 387
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + IL + + L + M G + ++ YNA+V C +D+
Sbjct: 388 EVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV--GVVTYNALVNGFCVQGHIDSALEL 445
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M P+++TY + L +++ EM++ + P + ++
Sbjct: 446 FRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQ 502
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
E AIE+ ++E+G P + N LL G+
Sbjct: 503 KGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 17 EMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
E +E E EH ++ Y T L + + ++AL+ L + + P + FS+ +
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
IL K + VQL+ ++ IG + P ++YN ++ LC ++DN FF MV +G
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDIG--MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNG 625
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFF 159
P+ TY ++ E L + E ++
Sbjct: 626 CMPNESTYIILIEGLAHEGLLKEAQDLL 653
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + +D AL+ R M C P ++ L L +L
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + + PN++ +N +V C ++ +QM+ HG P+ +TYN + + + K
Sbjct: 480 EM--LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + H ++ P + ++ I +L D E A+++++ + + G+ P
Sbjct: 538 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV 597
Query: 209 ANVLLVGL 216
N +L+GL
Sbjct: 598 YNKILLGL 605
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 18/252 (7%)
Query: 16 GEMVER----FEWNPEHVLAYETFLITLI-----RGKQVDEALKFLRVMKGENCFPTLKF 66
G MVER E EH A T L ++ + +VD+A K L M C P
Sbjct: 296 GGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTIS 355
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + +L + MV N PN + +N + +LC ++ +Q
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVR--NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M HG +TYN + + F M +P + T +T L +A+
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 470
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDV 242
+ A E+ +L P + NVL+ G L + E+M+ ++ Y+
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530
Query: 243 TMQKLKKAFYNE 254
+ + K +E
Sbjct: 531 LLDGITKDCSSE 542
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +V+ + + + ++EA++ + M C P L ++ LD + K S ++
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L +V G + P++I +++++G+L + ++ + F + G P ++ YN I
Sbjct: 547 LLHGLVSKGVS--PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 146 LIKNKKVHEVENFFHEMIKNEWQP 169
L K ++ +FF M+ N P
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMP 628
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 102/279 (36%), Gaps = 35/279 (12%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A +M+ R P +V+ Y L + R ++A+ L M+ + C P +
Sbjct: 157 GRVADALSLLDDMLRR-GCQP-NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV 214
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGF------------------------------ 95
++ ++ + + +L + + GF
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 96 ---NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
N MPN + ++ ++ C V+ + +QM HG ++ N++ + K +V
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ ++M P ++ T + L A+ + A E+ N ++ N P E + N
Sbjct: 335 DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTF 394
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ L G + E+M + VT L F
Sbjct: 395 ICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+ Y ++ +LC+ V + D M+ G P+ +TY ++ E + +N +
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM P + I + + A E+ N + G P S LL GL
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + + +VT L + F
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 293
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + K +M++R + NP +V+ + + + ++ ++ EA + + M
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKR-KINP-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N Q+ D+MV G + PN+ +N ++ C N +D+
Sbjct: 463 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD--PNIRTFNILINGYCKANRIDDG 520
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G D++TYN + + + K++ + F EM+ + P + +
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA-NVLLVGLRNLGRLSDV 225
L D E E A+EI+ I E + L+ N+++ G+ N ++ D
Sbjct: 581 LCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 625
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 4/247 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G EA +MVE + P V Y L + + Q A++ LR M+ N
Sbjct: 304 SGKEAEAMLLIDKMVE-YGCQPNAV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 361
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S +D L K + L++ M G + N+I YN ++G CN D+ +
Sbjct: 362 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKG--ITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M+ P+ +T++++ + +K K+ E E EMI P + + I
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A ++ + ++ G P + N+L+ G R+ D +M R ++ VT
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539
Query: 245 QKLKKAF 251
L + F
Sbjct: 540 NTLIQGF 546
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P FS ++ L + ++L D MV +G P+LI N +V LC +
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGKEAEAM 311
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+MV +G P+++TY + + K+ + +M + + + + I L
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ A ++N + GI + N+L+ G N GR D + +M+ R+I
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431
Query: 242 VTMQKLKKAFYNESR 256
VT L +F E +
Sbjct: 432 VTFSVLIDSFVKEGK 446
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + + + KQ D L + M+ + L S ++ +
Sbjct: 186 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 245
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ +G+ PN I ++ ++ LC V D+MV G PD +T N + L
Sbjct: 246 KIIKLGYE--PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ K E +M++ QP + + ++ + + A+E+ + E I
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++++ GL G L + EM + I +T L F N R
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 96/252 (38%), Gaps = 39/252 (15%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG V EA + MVE P+ ++ T + L + EA+ + M C P
Sbjct: 269 EGRVSEALELVDRMVE-MGHKPD-LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 326
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ L+++ K + ++L M N+ + + Y+ ++ LC + +DN F F
Sbjct: 327 VTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M G + +TYN++ + + +MIK + P +
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT----------- 433
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
F++ I +++ E G+L + +EM++R I +T
Sbjct: 434 ----FSVLIDSFVKE--------------------GKLREAEELHKEMIHRGIAPDTITY 469
Query: 245 QKLKKAFYNESR 256
L F E+
Sbjct: 470 TSLIDGFCKENH 481
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + +++ A + + M P + + LD L +S +++++
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 595
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ L ++ +YN ++ +CN + VD+ + F + G P TYN++ L K
Sbjct: 596 KIEKSKMEL--DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 653
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
+ E E F +M ++ P
Sbjct: 654 KGPLSEAELLFRKMEEDGHAP 674
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 6/184 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + F EMV R P +++ Y+ L L + ++AL+ ++
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKV--PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ I+ + +++ WD+ + + P + YN ++G LC +
Sbjct: 603 ELDIGIYNI---IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 659
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PD TYN++ + + + E+ + + I
Sbjct: 660 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719
Query: 180 MLLD 183
ML D
Sbjct: 720 MLSD 723
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 9/238 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW +A + EMV+R NP ++ Y T L R Q+ +A +F MK NC
Sbjct: 202 GWCLIKRTPKALEVLKEMVDR-GINP-NLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNC 259
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ + + T ++D M+ G ++P++ YNA + +LC + V+N
Sbjct: 260 EIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREG--VLPSVATYNAFIQVLCKKDSVENA 317
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++MV G P+ TYN++ L K E M +P I
Sbjct: 318 VVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRY 377
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV-----RRFAEEML 233
+ E E A+ ++ + LP + N+L+ G+ R D+ + FA+E+L
Sbjct: 378 YSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 435
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK----LNDSTH 82
+ + ++ T L L + K+V++A + R ++G T+ + +++V + +
Sbjct: 157 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTVTY-----NVIVNGWCLIKRTPK 211
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+++ MV G N PNL YN ++ + + FF +M D +TY +
Sbjct: 212 ALEVLKEMVDRGIN--PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTV 269
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
++ N F EMI+ P+ I +L D E A+ ++ ++ G
Sbjct: 270 VHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGY 329
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
P + NVL+ GL + G+ S EE++ R
Sbjct: 330 EPNVTTYNVLIRGLFHAGKFSR----GEELMQR 358
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 10/222 (4%)
Query: 33 ETFLITLIR---GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+TF I R + D+A+K M CF L F+ LD+L K +L+
Sbjct: 125 KTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 184
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ G + + YN +V C +MV G P+ TYN + + +
Sbjct: 185 LRG---RFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRA 241
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++ + FF EM K + + T + A E + +++ ++ G+LP A+
Sbjct: 242 GQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATY 301
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKL 247
N + L + + EEM+ + + Y+V ++ L
Sbjct: 302 NAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGL 343
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KDGDIRVAQSVF-NAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L + + + + EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLS 374
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 287 CRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDD 346
Query: 242 VTMQKLKKAFYNESR 256
V L E R
Sbjct: 347 VGYTALISGLCQEGR 361
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + L + +A + L M P + F++ +D K +L+D
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + PN++ YN+++ C ++ +D + F MV PD +TYN + + K
Sbjct: 351 EMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCK 408
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+V E F EM + + T I L A + + A +I+ ++ +G+ P +
Sbjct: 409 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 468
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
++LL GL G+L E + + I Y++ ++ + KA
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ KEG ++EA K F EM++R +P +++ Y + + ++DEA + +M ++C
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQR-SIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++L+ M G L+ N + YN ++ L D D
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMA 450
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +MV G PD +TY+++ + L K K+ + F + K++ +P I
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEG 510
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ A + E +++ + G+ P
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKP 534
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ P + Y L R Q+ AL L M P + S+ L+
Sbjct: 102 SLGEQMQNLGI-PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 160
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V L D MV +G+ P+ + +N ++ L +N D+MV G
Sbjct: 161 YCHGKRISEAVALVDQMVEMGYK--PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 218
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD TY + L K + + +M K + + + T I L + A ++
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+N + GI P + N L+ L N GR SD R +M+ R+I VT L AF
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338
Query: 254 ESR 256
E +
Sbjct: 339 EGK 341
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 4/244 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV R P+ + Y T + L + +D AL L+ M+ + ++
Sbjct: 204 EAVALIDRMVAR-GCQPD-LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K L++ M G P++ YN+++ LCN + R M+
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIK--PDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + K K+ E E F EMI+ P + + I D +
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +I+ ++ LP + N L+ G R+ + EM R ++ VT L +
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439
Query: 250 AFYN 253
+
Sbjct: 440 GLFQ 443
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 14/245 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL GK++ EA+ + M P F+ + L N ++
Sbjct: 145 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 204
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G P+L Y VV LC D+D +M + + YN I
Sbjct: 205 AVALIDRMVARG--CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K K + + + F++M +P + I+ L + A + + ++E I
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+L + + +EM+ R I VT L F M DR
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF-----CMHDRL 377
Query: 263 DSLER 267
D ++
Sbjct: 378 DEAQQ 382
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 71/185 (38%), Gaps = 6/185 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ A K F +MV + P ++ Y L L + ++++AL ++
Sbjct: 440 GLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ ++ + K + WD+ + + PN+I+Y ++ C +
Sbjct: 498 EPNIYTYNIMIEGMCK---AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PDS YN + +++ EM + + I
Sbjct: 555 ADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614
Query: 180 MLLDA 184
ML D
Sbjct: 615 MLHDG 619
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A + F M ER + V Y + + L + +A + +R M +
Sbjct: 124 GSCKIGLVNDAVELFDRM-ERDGVRADAV-TYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D+ VK + ++L++ M + P++ YN+++ LC + VD
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D MV G PD +TYN + K+K+V E F EM + + T I
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A P+ A EI++ + P + ++LL GL
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 332
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 2/226 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + L R + AL + M P + S+ ++ + N + L M
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 106
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+GF P++++YN ++ C V++ FD+M G D++TYN + L +
Sbjct: 107 EEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 164
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M+ + P + I + + + A++++ + + P + N
Sbjct: 165 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL GR+ + ++ + M+ + L VT L F R
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 270
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 32/232 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA K + EM R +P+ V Y + + L +VDEA + L +M + C P
Sbjct: 197 KEGKFSEAMKLYEEMTRRC-VDPD-VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 254
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIG---------------------------FN 96
+ ++ ++ K +L+ M G F+
Sbjct: 255 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 314
Query: 97 LM---PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
M PN+ Y+ ++ LC N V+ F+ M D TYN++ + K V
Sbjct: 315 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 374
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + F + +P ++ T I+ + + + ++ + E+G+LPL
Sbjct: 375 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 426
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
+P+++ ++ V+ + + + D V F M G D +YN++ CL + + +
Sbjct: 7 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66
Query: 158 FFHEMIKNEWQPTPLNCAT-------------AITMLLDADEPEF--------------- 189
+M+K ++P + ++ AI ++ +E F
Sbjct: 67 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126
Query: 190 -------AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A+E+++ + +G+ + N L+ GL GR SD R +M+ R I+ +
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186
Query: 243 TMQKLKKAFYNESR 256
T + F E +
Sbjct: 187 TFTAVIDVFVKEGK 200
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G V A TF EM++ P+ V A T L R ++++ L F ++ +
Sbjct: 180 YGQVGKVKLAEVTFLEMLQA-GCEPDAV-ACGTLLCAYARWGKLNDMLMFYAAVRRRDIV 237
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ + L K + LW+ M+ N+ PN Y V+G ++
Sbjct: 238 PSISVFNFMVSSLQKQKLHGKVIHLWEQMLEA--NVAPNQFTYTVVIGSYAKEGMLEEAM 295
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F +M P+ TY+++ K+ K E + EM P+ CA+ +T+
Sbjct: 296 DAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLY 355
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ A+ +++ + +N I+P E +L+ LG D +R EE+
Sbjct: 356 YKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YNA+V LC + +R F +++ G D++T +++ L K +K E EN +
Sbjct: 648 VYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRC 707
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ +E + + T I +L++ + A+ I++ ++ +GI + N+++ G+L
Sbjct: 708 LHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKL 767
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 98/259 (37%), Gaps = 12/259 (4%)
Query: 2 WEKEGNVVEANKTFGEMVE------RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 55
W K A GE V R P + +Y + + R + +A++ M
Sbjct: 163 WNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEM 222
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P ++ +D +K D L D MV G L PN I YN ++ LC
Sbjct: 223 TERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG--LKPNAITYNVLLSGLCRAG 280
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ D+M PD TY+++F+ L +N + + F + +KN C+
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCS 340
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ L + A E+ ++ G++P N L+ G G L +M +R
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400
Query: 236 RI----LIYDVTMQKLKKA 250
I + Y+ + L KA
Sbjct: 401 HIKPDHITYNALINGLCKA 419
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ G + F WN + + + EA+ LR M + P F N +
Sbjct: 153 SAGARPDTFAWN--------KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 204
Query: 74 LV-KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+ + V+++D M ++PN I YN ++ D++ F DQMV HG
Sbjct: 205 GMWRAGRGGDAVEVFDEMTERA--VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGL 262
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
P+++TYN++ L + ++ E EM + P + L + + +
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ L+NG+ + + ++LL GL G++S AEE+L
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVS----IAEEVL 359
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 130/307 (42%), Gaps = 44/307 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A TFG+M R P+H+ Y + L + +++ A L M+
Sbjct: 380 GYCQTGELEGAFSTFGQMKSR-HIKPDHI-TYNALINGLCKAERITNAQDLLMEMQDNGV 437
Query: 61 FPTLKFFSNALD-------------ILVKLNDS----------------------THTVQ 85
PT++ F+ +D +L ++ ++ V
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D M +++PN +YNA++ + D F ++M +G P +TYN++ +
Sbjct: 498 ILDDM--FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E E + + + P ++ T I+ + A+++ + + GI
Sbjct: 556 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 615
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDR 261
+ + L+ GL GRL ++ ++M+ ++ I+++ ++ K + NE ++ R
Sbjct: 616 VRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK-YGNEIKAEDLR 674
Query: 262 FDSLERR 268
+ L++R
Sbjct: 675 KEMLQKR 681
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P ++YN ++ C +++ F F QM PD +TYN + L K +++
Sbjct: 366 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 425
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ EM N PT T I + E + + + ENG+ P S ++
Sbjct: 426 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 485
Query: 216 LRNLGRLSDVRRFAEEMLNRRIL 238
G++ + ++M ++ +L
Sbjct: 486 FCKNGKIPEAVAILDDMFHKDVL 508
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 337 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ N + YN ++ L D D +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +TY+++ + L K K+ + F + K++ +P I +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 184 ADEPEFAIEIWNYILENGILP 204
A + E +++ + G+ P
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKP 533
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + + L + +A + L M P + FS +D VK +L+D
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + P++ Y++++ C ++ +D F+ M+ FP+ +TYN + + K
Sbjct: 350 EMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+V E F EM + + T I L A + + A +I+ ++ +G+ P +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
++LL GL G+L E + + I Y++ ++ + KA
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ + + + +Y + R Q+ AL L M P + S+ L+
Sbjct: 101 SLGERMQNLRISYD-LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
+ V L D MV +G+ P+ + +N ++ L +N DQMV G
Sbjct: 160 YCHSKRISDAVALVDQMVEMGYK--PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQ 217
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY + L K + + +M K + + + T I L + A +
Sbjct: 218 PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL 277
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+N + GI P + N L+ L N GR SD R M+ R+I VT L AF
Sbjct: 278 FNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK 337
Query: 254 ESR 256
E +
Sbjct: 338 EGK 340
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +A +MVE + P+ V + T + L + EA+ + M C
Sbjct: 159 GYCHSKRISDAVALVDQMVE-MGYKPDTV-TFNTLIHGLFLHNKASEAVALVDQMVQRGC 216
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + ++ L K D + L M + ++++YN ++ LC +D+
Sbjct: 217 QPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYNTIIDGLCKYKHIDDA 274
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F++M G PD TYN + CL + + MI+ + P + + I
Sbjct: 275 FALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDA 334
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++++ +++ I P + + L+ G RL + + E M+++
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 241 DVTMQKLKKAFYNESR 256
VT L K F R
Sbjct: 395 VVTYNTLIKGFCKAKR 410
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 4/244 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA +MV+R P+ V Y + L + +D AL L+ M+ + ++
Sbjct: 203 EAVALVDQMVQR-GCQPDLV-TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K L++ M G P++ YN+++ LCN + R M+
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIR--PDVFTYNSLISCLCNYGRWSDASRLLSNMIE 318
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T++ + + +K K+ E E + EMIK P ++ I D +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A ++ ++ P + N L+ G R+ + EM R ++ VT L +
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 250 AFYN 253
+
Sbjct: 439 GLFQ 442
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 71/185 (38%), Gaps = 6/185 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ A K F +MV + P ++ Y L L + ++++AL ++
Sbjct: 439 GLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ ++ + K + WD+ + + PN+I+Y ++ C +
Sbjct: 497 EPDIYTYNIMIEGMCK---AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G PDS YN + +++ EM + + I
Sbjct: 554 ADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 180 MLLDA 184
ML D
Sbjct: 614 MLHDG 618
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 337 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ N + YN ++ L D D +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +TY+++ + L K K+ + F + K++ +P I +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 184 ADEPEFAIEIWNYILENGILP 204
A + E +++ + G+ P
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKP 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 8/248 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A F EM + P +V+ Y + + L + +A + L M P +
Sbjct: 270 NVNDALNLFTEMDNK-GIRP-NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
FS +D VK +L+D M+ + P++ Y++++ C ++ +D F+
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ FP+ +TYN + + K K+V E F EM + + T I L A +
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDV 242
+ A +I+ ++ +G+ P + ++LL GL G+L E + + I Y++
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 243 TMQKLKKA 250
++ + KA
Sbjct: 506 MIEGMCKA 513
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV R P+ + Y T + L + +D AL L+ M+ + ++
Sbjct: 203 EAVALIDRMVAR-GCQPD-LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L + + L+ M G + PN++ YN+++ LCN + R M+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T++ + + +K K+ E E + EMIK P ++ I D +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A ++ ++ P + N L+ G R+ + EM R ++ VT L +
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 250 AFYN 253
+
Sbjct: 439 GLFQ 442
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 2/226 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + R Q+ AL L M P + S+ L+ + V L D M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ + PN + +N ++ L +N D+MV G PD TY + L K
Sbjct: 177 FVMEYQ--PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M K + + + T I L + A+ ++ + GI P + N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ L N GR SD R +M+ R+I VT L AF E +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Query: 23 EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E+ P V + T + L + EA+ + M C P L + ++ L K D
Sbjct: 180 EYQPNTV-TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L M + ++++Y ++ LCN +V++ F +M G P+ +TYN +
Sbjct: 239 ALSLLKKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
CL + + +MI+ + P + + I + + A ++++ +++ I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + L+ G RL + + E M+++ VT L K F R
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ A K F +MV + P ++ Y L L + ++++AL ++
Sbjct: 439 GLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ ++ + K + WD+ + + PN+I+Y ++ C +
Sbjct: 497 EPDIYTYNIMIEGMCK---AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G P+S TYN + +++ EM + + I
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 180 MLLDA 184
ML D
Sbjct: 614 MLHDG 618
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 85/208 (40%), Gaps = 6/208 (2%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
++D+A+ M P++ F+ L + K+N + L + M + + +L
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY--DLYS 117
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN ++ C + + +M+ G PD +T + + K++ E +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG--- 220
E+QP + T I L ++ A+ + + ++ G P + ++ GL G
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 221 -RLSDVRRFAEEMLNRRILIYDVTMQKL 247
LS +++ + + ++IY + L
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDAL 265
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ A + G M P+ Y + L +V +AL L M C
Sbjct: 119 GYCRYGHLDAARRLIGSM----PVAPD-AYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 173
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ + K + + + D M G PN++ YN ++ +C VD+
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCT--PNIVTYNVIINGMCREGRVDDA 231
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+++ +G PD+++Y + + L +K+ +VE F EM++ P + I
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
E AI++ + E+ N+++ + GR+ D +F M N
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 237 ILIYDVTMQKLKKA 250
+ Y ++ L +A
Sbjct: 352 TISYTTVLKGLCRA 365
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + + P+ V +Y T L L K+ D+ + M +NC
Sbjct: 221 GMCREGRVDDARDLLNRLFS-YGCQPDTV-SYTTLLKGLCASKRWDDVEELFAEMMEKNC 278
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ M N + N V+ +C VD+
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE--HECATNTTLCNIVINSICKQGRVDDA 336
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+F + M +G PD+++Y + + L + ++ ++ + EM++N P + T I +
Sbjct: 337 FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
L E AI + + E+G + N L+ G
Sbjct: 397 LCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG 431
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + +D AL+ R M C P ++ L L +L
Sbjct: 422 VVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVA 478
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + + PN++ +N +V C +D +QM+ HG P+ +TYN +F+ + K
Sbjct: 479 EM--LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITK 536
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + H ++ P + ++ I +L D E AI++++ + G+ P
Sbjct: 537 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALV 596
Query: 209 ANVLLVGL 216
N +L+GL
Sbjct: 597 YNKILLGL 604
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 14/227 (6%)
Query: 16 GEMVER----FEWNPEHVLAYETFLITLI-----RGKQVDEALKFLRVMKGENCFPTLKF 66
G MVER + EH A T L ++ + +VD+A KFL M C P
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + +L MV N PN + +N + +LC ++ +Q
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVR--NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M HG +TYN + + F M +P + T +T L +A+
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 469
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ A E+ +L P + NVL+ G L + E+M+
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 17 EMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 71
E +E E EH ++ Y T + + ++AL+ L + + P + FS+ +
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566
Query: 72 DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHG 131
IL K + +Q++ + IG + P ++YN ++ LC +++DN F MV +G
Sbjct: 567 GILSKEDRVEEAIQMFHLAQDIG--MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNG 624
Query: 132 AFPDSLTYNMIFECLIKNKKVHEVENFF 159
P+ TY ++ E L + + E ++
Sbjct: 625 CMPNESTYIILIEGLAREGLLKEAQDLL 652
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 7/213 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V +A K M + NP+ ++Y T L L R ++ ++A + L+ M NC P
Sbjct: 329 KQGRVDDAFKFLNNM-GSYGCNPD-TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPN 386
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + IL + + L + M G + ++ YNA+V C +D+
Sbjct: 387 EVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV--GVVTYNALVNGFCVQGHIDSALEL 444
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M P+++TY + L +++ EM+ + P + +
Sbjct: 445 FRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQ 501
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ AIE+ ++E+G P + N L G+
Sbjct: 502 KGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + EM+ R P +V+ + + + +DEA++ + M C P L ++
Sbjct: 473 AAELVAEMLHR--DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
D + K S ++L +V G + P++I +++++G+L + V+ + F
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVS--PDVITFSSIIGILSKEDRVEEAIQMFHLAQDI 588
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P +L YN I L K HE++N A
Sbjct: 589 GMRPKALVYNKILLGLCKR---HEIDN--------------------------------A 613
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
I+ Y++ NG +P E++ +L+ GL G L + + + +R ++
Sbjct: 614 IDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+ Y ++ +LC+ V + D M+ G P+ +TY ++ E + KN +
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
EM P + I + + A ++ N + G P S LL GL
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV EM+ + + +VT L + F
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 4/238 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V +A +M+ R P +V+ Y L + + ++A+ L M+ + C P +
Sbjct: 156 GRVADALSLLDDMLRR-GCQP-NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV 213
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ ++ + + L + + G P+ + Y ++ LC + D+V F
Sbjct: 214 TYNVIINGMCREGRVDDARDLLNRLFSYGCQ--PDTVSYTTLLKGLCASKRWDDVEELFA 271
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M+ P+ +T++M+ + V +M ++E C I +
Sbjct: 272 EMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQG 331
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A + N + G P S +L GL R +D + +EM+ +VT
Sbjct: 332 RVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVT 389
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 12/259 (4%)
Query: 2 WEKEGNVVEANKTFGEMVE------RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 55
W K A GE V R P + +Y + + R + +A++ M
Sbjct: 167 WNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEM 226
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P ++ +D +K D +L D MV G L PN I YN ++ LC
Sbjct: 227 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG--LKPNAITYNVLLSGLCRAG 284
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ D+M PD TY+++F+ L +N + + F + +KN C+
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 344
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ L + A E+ ++ G++P N L+ G G L +M +R
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404
Query: 236 RI----LIYDVTMQKLKKA 250
I + Y+ + L KA
Sbjct: 405 HIKPDHITYNALINGLCKA 423
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ G + F WN + + + EA+ LR M + P F N +
Sbjct: 157 SAGARPDTFAWN--------KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 208
Query: 74 LV-KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
+ + V+++D M ++PN I YN ++ D++ FR DQMV HG
Sbjct: 209 GMWRAGRGGDAVEVFDEMTERA--VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 266
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
P+++TYN++ L + ++ E EM + P + L + + +
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326
Query: 193 IWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
++ L+NG+ + + ++LL GL G++S AEE+L
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVS----IAEEVL 363
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 131/307 (42%), Gaps = 44/307 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A TFG+M R P+H+ Y + L + +++ A L M+
Sbjct: 384 GYCQTGELEGAFSTFGQMKSR-HIKPDHI-TYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 61 FPTLKFFSNALD-------------ILVKLNDS----------------------THTVQ 85
PT++ F+ +D +L ++ ++ V
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D M +++PN +YNA++ + D F ++M +G P +TYN++ +
Sbjct: 502 ILDDM--FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E E + + + P ++ T I+ + A+++ + + GI
Sbjct: 560 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 619
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDR 261
+ + L+ GL GRL+++ ++M+ ++ I+++ ++ K + NE ++ R
Sbjct: 620 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK-YGNEIKAEDLR 678
Query: 262 FDSLERR 268
+ L++R
Sbjct: 679 KEMLQKR 685
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P ++YN ++ C +++ F F QM PD +TYN + L K +++
Sbjct: 370 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 429
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ EM N PT T I + E + + + ENG+ P S ++
Sbjct: 430 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 489
Query: 216 LRNLGRLSDVRRFAEEMLNRRIL 238
G++ + ++M ++ +L
Sbjct: 490 FCKNGKIPEAVAILDDMFHKDVL 512
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALSVLNGMIKSGCKPNVHV--YNTLINGLAGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 PPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 311
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLHDAVTKKIV 371
Query: 239 IYDVT 243
+ +T
Sbjct: 372 LTKIT 376
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 67/187 (35%), Gaps = 35/187 (18%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS--------------------------- 136
Y+A++ LC ++D + M+ G P+
Sbjct: 132 YSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMG 191
Query: 137 --------LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+TYN + L KN+ E N E++ P + + + L + E
Sbjct: 192 TMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVE 251
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+++WN + G P N+L+ GL ++G++ +M + V+ L
Sbjct: 252 RALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLM 311
Query: 249 KAFYNES 255
+ FY +
Sbjct: 312 EGFYKDG 318
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 15/255 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K NV A F EM R ++ V Y + L + + DEA F M+ E C P
Sbjct: 273 KLNNVHGALGLFEEM--RHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD 330
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFR 122
+N ++ L K V+L++ M + +P+++ YN ++ L + + + +
Sbjct: 331 TVVINNMINFLGKAGRLDDAVKLFEEMGTL--QCIPSVVTYNTIIKALFESKSRISEISS 388
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+F++M G P TY+++ + K + + EM + + P P + I L
Sbjct: 389 WFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEM----LNR 235
A + A E++ + EN +SA V V +++L GRL D +EM
Sbjct: 449 KAKRYDIAHELFQELKENC---GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTP 505
Query: 236 RILIYDVTMQKLKKA 250
+ Y+ M L +A
Sbjct: 506 NVYAYNALMSGLARA 520
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 5/268 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLA---YETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
VVE +M++ NP V+ + L K + +A+ +K C PT
Sbjct: 131 VVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTA 190
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ +++ + +L+ +L++ M G + P+ + Y+A++ C D+ R
Sbjct: 191 QAYNSMIIMLMHEGQYEKVHELYNEMSNEG-HCFPDTVTYSALISAFCKLGRQDSAIRLL 249
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
++M +G P + Y M+ K VH F EM +P I L A
Sbjct: 250 NEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKA 309
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ A ++ + G P N ++ L GRL D + EEM + + VT
Sbjct: 310 GRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTY 369
Query: 245 QKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ KA + ES+S S R K S
Sbjct: 370 NTIIKALF-ESKSRISEISSWFERMKGS 396
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC-FPTLKFFSNALDILVKLNDSTHTV 84
P AY + + L + K+ D A + + +K ENC + + ++ + L K V
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDIAHELFQELK-ENCGSSSARVYAVMIKHLGKAGRLDDAV 492
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M +G PN+ YNA++ L +D +M HG PD +YN+I
Sbjct: 493 NLFDEMNKLGCT--PNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILN 550
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
L K H M ++ +P ++ T + + A
Sbjct: 551 GLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHA 590
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM + P +V AY + L R +DEAL +R M+ C P
Sbjct: 484 KAGRLDDAVNLFDEM-NKLGCTP-NVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPD 541
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K +++ M P+ + YN V+G + + + +
Sbjct: 542 INSYNIILNGLAKTGGPHRAMEMLSNMKQSAIK--PDAVSYNTVLGAMSHAGLFEEAAKL 599
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 600 MKEMNVLGFEYDLITYSSILEAIGK 624
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 5/218 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
K G + +A K F EM + P V+ Y T + L K ++ E + MKG P
Sbjct: 343 KAGRLDDAVKLFEEM-GTLQCIPS-VVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K N + + L + M GF P Y +++ L D
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCP--AAYCSLIDALGKAKRYDIAHE 458
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
F ++ + + Y ++ + L K ++ + N F EM K P ++ L
Sbjct: 459 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLA 518
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A + A+ + E+G +P S N++L GL G
Sbjct: 519 RAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTG 556
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F EM R ++ V Y + L + ++DEA F M+ E C P F +N ++ L
Sbjct: 255 FEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL 312
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFDQMVFHGAF 133
K ++L+ M + +P+++ YN ++ L + + V +F++M G
Sbjct: 313 GKAGRLDDAMKLFQEMETL--RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 370
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P S TY+++ + K ++ + EM + + P P + I L A + A E+
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430
Query: 194 WNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEM 232
+ + EN +SA V V +++L GRL D +EM
Sbjct: 431 FQELKENC---GSSSARVYAVMIKHLGKAGRLDDAINMFDEM 469
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 7/269 (2%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIR----GKQVDEALKFLRVMKGENCFPT 63
VVE +M++ NP V+ T L ++R K V +A+ +K C P
Sbjct: 102 VVEQYGEMWKMIQEMVRNPICVVT-PTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPI 160
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ + +L+ QL++ M G + P+ + Y+A++ C D+ +
Sbjct: 161 AQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG-HCFPDTVTYSALISAFCKLGRRDSAIQL 219
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M G P + Y M+ K H + F EM +P I L
Sbjct: 220 LNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 279
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + A + + G P N ++ L GRL D + +EM R + VT
Sbjct: 280 AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVT 339
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ KA + ES+S S R K S
Sbjct: 340 YNTIIKALF-ESKSRASEVPSWFERMKES 367
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM + P+ V AY + L R +DEAL +R M+ C P
Sbjct: 455 KAGRLDDAINMFDEM-NKLGCAPD-VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 512
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K +++ M + P+++ YN V+G L + + +
Sbjct: 513 INSYNIILNGLAKTGGPHRAMEMLSNMKQ--STVRPDVVSYNTVLGALSHAGMFEEASKL 570
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 571 MKEMNTLGFEYDLITYSSILEAIGK 595
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC-FPTLKFFSNALDILVKLNDSTHTV 84
P AY + + L + K+ D A + + +K ENC + + ++ + L K +
Sbjct: 405 PPCPAAYCSLIDALGKAKRYDLACELFQELK-ENCGSSSARVYAVMIKHLGKAGRLDDAI 463
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
++D M +G P++ YNA++ L +D +M HG PD +YN+I
Sbjct: 464 NMFDEMNKLG--CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 521
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
L K H M ++ +P ++ T + L A
Sbjct: 522 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 561
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 86/223 (38%), Gaps = 15/223 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
K G + +A K F EM E P V+ Y T + L K + E + MK P
Sbjct: 314 KAGRLDDAMKLFQEM-ETLRCIPS-VVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K N + L + M GF P Y +++ L D
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP--AAYCSLIDALGKAKRYDLACE 429
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP-----TPLNCATA 177
F ++ + + Y ++ + L K ++ + N F EM K P L A
Sbjct: 430 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 489
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
T +LD A+ + E+G +P S N++L GL G
Sbjct: 490 RTGMLDE-----ALSTMRRMQEHGCIPDINSYNIILNGLAKTG 527
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KEGEMRLAQSVF-DAITKWGLRPS-VVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L++ M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDEANELFNEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ Q++ G PD +TYN + L K + + + EM E +P + T I
Sbjct: 264 YKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + ML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLS 374
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 7/239 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
+ T + R +Q +EALK+ MK E P +++ +D+ ++ V+L++ +
Sbjct: 181 FSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK 240
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + L + + Y A+ + D ++ + +M G+ P+++ N + L K K
Sbjct: 241 SVNWKL--DTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGK 298
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V++ + F+EM + PTP+ + + M + A E++ + G A N
Sbjct: 299 VNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNS 358
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQK-LKKAFYNESRSMRDRFDSL 265
L+ GR+ +EM N L Y M K + +R M D+ +L
Sbjct: 359 LMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVAL 417
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 4/194 (2%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T + TL + +V++A K M+ PT S +++ ++ ++++ +
Sbjct: 288 TLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTE 347
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G+ ++ +YN+++ V+ +M G PD LTY V
Sbjct: 348 GWKC--DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVD 405
Query: 154 EVENFFHEMIKNEWQP-TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F +++ +P TPL I A E E A +I++ ++E+G + + +
Sbjct: 406 PARRMFDKVVALNGKPDTPL-FTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGM 464
Query: 213 LVGLRNLGRLSDVR 226
L+ + + D R
Sbjct: 465 LLSCMAMAKSDDER 478
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/154 (16%), Positives = 64/154 (41%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + P+ ++ ++ + ++F++M G PD +TYN + + + +V+
Sbjct: 171 GRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVN 230
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + ++ W+ + + A + + +++ + ++G P N L+
Sbjct: 231 EAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLM 290
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G+++ ++ EM + VT+ L
Sbjct: 291 GTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 2/225 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y L IR ++D++L M P++ FS L + K+ + LW+ M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+G + NL N ++ C + + F +M+ G PD +T+ + + +
Sbjct: 109 MLG--IPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+++ F M++ ++P + T I L + + + A+++ N + +GI P + N
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL N GR D R M R I T L A E R
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 2/228 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + + L RG ++ +AL M P + ++ +D L K + + L +
Sbjct: 151 IVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G P+ + YN+++ LCN+ D+ R M +PD T+N + + +K
Sbjct: 211 RMEVDGIR--PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E E + EMI+ P + + I L + A +++ +++ G P +
Sbjct: 269 EGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVT 328
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
++L+ G ++ + EM R ++ VT L + + +
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 4/217 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA + + EM+ R +P+ ++ Y + L ++DEA + M + CFP
Sbjct: 268 KEGRISEAEELYEEMIRR-SLDPD-IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPD 325
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ K H ++L+ M G ++ N + Y ++ C ++
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRG--VVRNTVTYTVLIQGYCRAGKLNVAEEI 383
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F MVF G P+ +TYN++ L N K+ + +M K+ + I +
Sbjct: 384 FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCK 443
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A E A +++ + G+ P + +++GL G
Sbjct: 444 AGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + + +A F MVE + P +V+ Y T + L + KQVD AL L M+ +
Sbjct: 160 GFCRGDRIYDALYMFDRMVE-MGYEP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P +++ + L + +D+T V + P++ +NA++ +
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCM-----TKREIYPDVFTFNALIDACVKEGRI 272
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+++M+ PD +TY+++ L ++ E E F M+ P + +
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
I + + E ++++ + + G++ + VL+ G G+L
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+ E P + + + TF+ L +VD A+K M CFP ++ LD L+K
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
L M G L NL+ YN ++ C + +MV G PD++T N
Sbjct: 508 GEAFGLVKDMEHRGIEL--NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVN 565
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
++ + K KV+ + +W P + + I+ + E AI +L
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 201 GILPLEASANVLLVGL-RNLGRLSDVR 226
GI P A+ NVL+ L N+G V+
Sbjct: 626 GISPNVATWNVLVRHLFSNMGHSGAVQ 652
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+AY + L + + +A+ M+ C P ++ +S +D K D ++W
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 88 DIMVGIGF---------------------------------NLMPNLIMYNAVVGLLCNN 114
+ M+ G N PN + +N + LC +
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
VD + FDQM G FP++ TYN + + L+K+++ E +M E + LN
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM---EHRGIELNL 526
Query: 175 ATAITMLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
T T++ A A+E+ ++ G P + N+++ G++
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 39/278 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA + EM+ + +P +V++Y T + L V+ +L L M C
Sbjct: 255 GVCKEYTFEEAFQLLDEMMNK-GIDP-NVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L F++ + S + WD M+ G ++PN++ YNA++ LC+ + +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG--VVPNVVAYNALMHGLCSKRSLGDA 370
Query: 121 FRFFDQM-----------------------------------VFHGAFPDSLTYNMIFEC 145
F+QM + HG P+ + Y + +
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +N ++ M P + T I L + ++AI++++ + +G P
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ N LL L R + ++M +R I + VT
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVT 528
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 7/205 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y L L + +VD A K L M + C P ++ + L KL +L
Sbjct: 180 NVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL- 238
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ P++ +YNA++ +C + F+ D+M+ G P+ ++Y I L
Sbjct: 239 ------AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V +M P + I A++ W+ ++ G++P
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ N L+ GL + L D +M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQM 377
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 97/268 (36%), Gaps = 37/268 (13%)
Query: 27 EHVLAYETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E + E I++I R ++ALK M+ PT+K +++ LD L+ N
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++ M G PN+ YN ++ LC NN VD + +M G PD ++Y +
Sbjct: 165 INPIYSNMKKDGME--PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 143 FECLIKNKKVHEVE------------------------------NFFHEMIKNEWQPTPL 172
L K KV E EM+ P +
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ T I L DA E ++ + + G P + L+ G G + F + M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 233 LNRRILIYDVTMQKLKKAFYNESRSMRD 260
+ ++ V L ++ RS+ D
Sbjct: 343 IREGVVPNVVAYNALMHGLCSK-RSLGD 369
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 10/218 (4%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+ F+ P L Y+ + L +++D L+ MK E + F + + +
Sbjct: 70 KSFKHTP---LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGS 126
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
S ++ + M F + P + +YN ++ L + N + + M G P+ TY
Sbjct: 127 SEQALKTFYRMQD--FRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N++ + L KN +V EM P ++ T I+ L + + A E L
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE-----LA 239
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P N L+ G+ + + +EM+N+ I
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 5/248 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG V EA M E+ P+ +Y+ + + ++D A+++L M + C P
Sbjct: 318 REGRVREAVNVLEVMKEK-GLTPDSY-SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L K + + +++ + +G P + YN + L + +
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVG--CPPTVRAYNTMFSALWSCGNKIKALEM 433
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ G PD +TYN + CL ++ V E +M +QPT ++ + +
Sbjct: 434 ISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCK 493
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A IE+ ++E G LP E S +L+ G+ G ++ A + ++ D +
Sbjct: 494 AHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD-S 552
Query: 244 MQKLKKAF 251
++L K F
Sbjct: 553 SKRLNKTF 560
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 103/234 (44%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + AN+ F M R ++P+ V+ Y + +L +++ A + + + + C
Sbjct: 140 GFSKANQIDSANQVFDRMRSR-GFSPD-VVTYNIMIGSLCSRGKLELAFEVMDELLKDGC 197
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ ++ + ++L+D +V G L P+L YNA++ +C D
Sbjct: 198 KPSVITYTILIEATILEGRINEALELFDELVSRG--LRPDLYTYNAIIRGICKEGMEDRA 255
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD ++YN++ + + + E +M+ + +P + + I+
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A+ + + E G+ P S + L+ GRL + E+M++
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 4/243 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + EA + F E+V R P+ + Y + + + D AL F+R + C P +
Sbjct: 214 EGRINEALELFDELVSR-GLRPD-LYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDV 271
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L + + +L MV G PN++ ++ ++ C V
Sbjct: 272 VSYNILLRSFLNKSRWEDGERLMKDMVLSGCE--PNVVTHSILISSFCREGRVREAVNVL 329
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+ M G PDS +Y+ + K ++ + +M+ + P +N T + L
Sbjct: 330 EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF 389
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ A++++ + E G P + N + L + G EM+ + I ++T
Sbjct: 390 GCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITY 449
Query: 245 QKL 247
L
Sbjct: 450 NSL 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YNA++ N +D+ + FD+M G PD +TYN++ L K+
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
E++K+ +P+ + I + A+E+++ ++ G+ P + N ++ G+
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 219 LG----RLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G L VR + N ++ Y++ L ++F N+SR
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNI----LLRSFLNKSR 286
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 11/254 (4%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+K V+E +T+G+ P+ V +Y + + Q+D A + M+ P
Sbjct: 114 KKAMRVMEILETYGD--------PD-VYSYNAMISGFSKANQIDSANQVFDRMRSRGFSP 164
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ ++ + L ++ D ++ G P++I Y ++ ++
Sbjct: 165 DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCK--PSVITYTILIEATILEGRINEALE 222
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
FD++V G PD TYN I + K +F + P ++ + L
Sbjct: 223 LFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFL 282
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ E + ++ +G P + ++L+ GR+ + E M + +
Sbjct: 283 NKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSY 342
Query: 243 TMQKLKKAFYNESR 256
+ L AF E R
Sbjct: 343 SYDPLISAFCKEGR 356
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLXDEM 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I +
Sbjct: 287 CKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDX 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 321 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ N + YN ++ L D D +
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYNTLIQGLFQAGDCDMAQKI 436
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +MV G PD +TY+++ + L K K+ + F + K++ +P I +
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496
Query: 184 ADEPEFAIEIWNYILENGILP 204
A + E +++ + G+ P
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKP 517
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 8/248 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A F EM + P +V+ Y + + L + +A + L M P +
Sbjct: 254 NVNDALNLFTEMDNK-GIRP-NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 311
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
FS +D VK +L+D M+ + P++ Y++++ C ++ +D F+
Sbjct: 312 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ FP+ +TYN + + K K+V E F EM + + T I L A +
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDV 242
+ A +I+ ++ +G+ P + ++LL GL G+L E + + I Y++
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489
Query: 243 TMQKLKKA 250
++ + KA
Sbjct: 490 MIEGMCKA 497
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA MV R P+ + Y T + L + +D AL L+ M+ + ++
Sbjct: 187 EAVALIDRMVAR-GCQPD-LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L + + L+ M G + PN++ YN+++ LCN + R M+
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T++ + + +K K+ E E + EMIK P ++ I D +
Sbjct: 303 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A ++ ++ P + N L+ G R+ + EM R ++ VT L +
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422
Query: 250 AFYN 253
+
Sbjct: 423 GLFQ 426
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 2/226 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y + R Q+ AL L M P + S+ L+ + V L D M
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ + PN + +N ++ L +N D+MV G PD TY + L K
Sbjct: 161 FVMEYQ--PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M K + + + T I L + A+ ++ + GI P + N
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ L N GR SD R +M+ R+I VT L AF E +
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Query: 23 EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E+ P V + T + L + EA+ + M C P L + ++ L K D
Sbjct: 164 EYQPNTV-TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ L M + ++++Y ++ LCN +V++ F +M G P+ +TYN +
Sbjct: 223 ALSLLKKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
CL + + +MI+ + P + + I + + A ++++ +++ I
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + L+ G RL + + E M+++ VT L K F R
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ A K F +MV + P ++ Y L L + ++++AL ++
Sbjct: 423 GLFQAGDCDMAQKIFKKMVS--DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ ++ + K + WD+ + + PN+I+Y ++ C +
Sbjct: 481 EPDIYTYNIMIEGMCK---AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G P+S TYN + +++ EM + + I
Sbjct: 538 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597
Query: 180 MLLDA 184
ML D
Sbjct: 598 MLHDG 602
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 85/208 (40%), Gaps = 6/208 (2%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
++D+A+ M P++ F+ L + K+N + L + M + + +L
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY--DLYS 101
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN ++ C + + +M+ G PD +T + + K++ E +M
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG--- 220
E+QP + T I L ++ A+ + + ++ G P + ++ GL G
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221
Query: 221 -RLSDVRRFAEEMLNRRILIYDVTMQKL 247
LS +++ + + ++IY + L
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDAL 249
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + G L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLTDEM 302
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + A K EM++ + PE+ Y + + V EA M+ E
Sbjct: 264 GWCRARDPKRAMKVLEEMIQ-MKHTPEN-FTYNAAIDSFCSAGLVSEARDLFEFMRTEGS 321
Query: 61 F---PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K +S + L K +L M G MP++ Y ++ + + +
Sbjct: 322 TISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCG--CMPDVSTYKDLIEGMLLVDKL 379
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + D+M G PD +TYN + L +K + MI+ +P+
Sbjct: 380 DAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNML 439
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M + EP+ AI IW + + G + ++ GL + GR D +E++NR +
Sbjct: 440 MVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGM 499
Query: 238 LI----YDVTMQKLKK-----AFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D M +L A + S MR ++ ++ RR+ +Q
Sbjct: 500 KLSYKKFDAIMLRLSAVGNLGAIHRLSEHMRRFYNVAMSRRFAITQ 545
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G + EA + EM + + N + T L TL +++D+A K L
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNS---VTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F + + K S ++LWD M ++P++I YN ++G LC++ D
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK--EIIPSIITYNTMIGGLCHSGKTDQ 545
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++++ G PD TYN I + +V + F ++M+K ++P C +
Sbjct: 546 SIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L + A++++N + G + N ++ GL R + EM +++
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKL 663
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 13/270 (4%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E + EA G+M + F P++V +Y T L L + +++EA L MK P
Sbjct: 225 ENKLSEAIGLIGKMKD-FSCFPDNV-SYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNR 282
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + KL Q+ D+M N++P++ YN ++G LC + +D FR
Sbjct: 283 NTFNILVSGYCKLGWLKEAAQVIDLMAQ--NNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340
Query: 125 DQMVFHGAFPDSLTYNMI----FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M PD +TYN + F+C K ++ + +K P + +
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVK----PNAVTYNVVVKW 396
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + A + E+G P + N L+ G GRLS+ R +EM + + +
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMN 456
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
VT+ + E R + D + L K
Sbjct: 457 SVTLNTILHTLCGE-RKLDDAYKLLSSASK 485
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T ++ + + EA+K MK + P++ ++ + L + ++ +
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
++ G L+P+ YN ++ C V+ F+F ++MV PD T N++ L
Sbjct: 553 LLESG--LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + F+ I + T I+ L D E A ++ + E + P +
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N +L L + GR+ + AEE ++R
Sbjct: 671 NAILSALADAGRMKE----AEEFMSR 692
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%)
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
I + N +N ++ C N + +M FPD+++YN I + L K K+
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+E + +M N P ++ + A ++ + + +N +LP + N+L
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNML 323
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+ GL G++ + R +EM N ++L VT L ++ S S++
Sbjct: 324 IGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 39/270 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G + EA + EM E + P+ V+ Y T + + + + M+G+
Sbjct: 326 GLCKDGKIDEAFRLKDEM-ENLKLLPD-VVTYNTLINGCFDCSSSLKGFELIDKMEGKGV 383
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + VK + M GF+ P+ + +N ++ C +
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS--PDCVTFNTLINGYCKAGRLSEA 441
Query: 121 FRFFDQM--------------VFH---------------------GAFPDSLTYNMIFEC 145
FR D+M + H G F D ++Y +
Sbjct: 442 FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 501
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K+ K E + EM + E P+ + T I L + + + +I+ N +LE+G++P
Sbjct: 502 YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPD 561
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E + N +++G G++ +F +M+ +
Sbjct: 562 ETTYNTIILGYCREGQVEKAFQFHNKMVKK 591
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF---R 122
++ V N H Q+++ M + +L PNL+ N ++ L +V+
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRL--HLKPNLLTCNTLINALVRYPSKPSVYLSKA 198
Query: 123 FFDQMVFHGAFPDSLTYN-MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F ++ G ++ T+N +I+ C I+NK + E +M P ++ T + +L
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENK-LSEAIGLIGKMKDFSCFPDNVSYNTILDVL 257
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL--- 238
+ A ++ + NG+LP + N+L+ G LG L + + + M +L
Sbjct: 258 CKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDV 317
Query: 239 -IYDVTMQKL-KKAFYNESRSMRDRFDSLE 266
Y++ + L K +E+ ++D ++L+
Sbjct: 318 WTYNMLIGGLCKDGKIDEAFRLKDEMENLK 347
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + L + VD A+ L MK C P + ++ L L +L
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G +P+ + +N ++G LC + + F QM G P+S+TY+ I L
Sbjct: 241 DNMTQNG--CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+ + F+EM + P + A L D D E AI+ + ++GI P
Sbjct: 299 KATKLDQALELFNEMGHKGFNPDKIYQLLA-ECLNDDDTIEEAIQTVRKLQDSGISPHTV 357
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL-----KKAFYNESRSM 258
N +L+GL G+ M++ + D+T L + + NE+R +
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAREL 413
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 14/237 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVM 55
G EG+V +A +E P H + Y T L L ++ +A + + M
Sbjct: 86 GMCGEGDVDDA-------LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138
Query: 56 KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
ENC P F+ + L + +QL + M G N++ YNA++ LC
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT--ANIVTYNAIINGLCEQR 196
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+VD +M +G PD +TYN + + L + + E M +N P +
Sbjct: 197 NVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFN 256
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
T I L AIE++ + + G P + + ++ GL +L EM
Sbjct: 257 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 313
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 12/226 (5%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + TL QV +AL L M C P + ++ L+ K ++L D+M
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G PN + YN ++ +C DVD+ + HG P ++ YN + + L ++
Sbjct: 70 AEGCT--PNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 127
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + EM++ P I L + AI++ + ++G + N
Sbjct: 128 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 187
Query: 212 LLVGL---RN----LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
++ GL RN +G LS ++ + I+ Y+ ++ L A
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYG---CKPDIVTYNTLLKGLCSA 230
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 54/137 (39%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PN YN ++ LC V + D M+ G PD +TYN++ E K + +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
M P + + + + + A+E+ + +G P + N +L GL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 217 RNLGRLSDVRRFAEEML 233
+ R D EML
Sbjct: 123 CSAERWGDADELVTEML 139
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A++ EM+ E P + + + +L R + +A++ L M C + ++
Sbjct: 130 DADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 187
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
++ L + + + L M G P+++ YN ++ LC+ + D M
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCK--PDIVTYNTLLKGLCSAARWVDAEELMDNMTQ 245
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+G PD++T+N + L + + + F +M P + +T I+ L A + +
Sbjct: 246 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 305
Query: 190 AIEIWNYILENGILP 204
A+E++N + G P
Sbjct: 306 ALELFNEMGHKGFNP 320
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 97/244 (39%), Gaps = 4/244 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G V +A +M+ R P+ V+ Y L +G+ +A++ + +M+ E C P
Sbjct: 19 ERGQVRDALSVLDDMLCR-GCAPD-VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPN 76
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ +D + D ++L + G P+ + YN V+ LC+ +
Sbjct: 77 NVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK--PSTVNYNTVLKGLCSAERWGDADEL 134
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ P+ T+N++ L + + + +M K+ + I L +
Sbjct: 135 VTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCE 194
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+ + + + G P + N LL GL + R D + M L +VT
Sbjct: 195 QRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVT 254
Query: 244 MQKL 247
L
Sbjct: 255 FNTL 258
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGENCF 61
++G +V+A + F +M ++ P + Y T + L + ++D+AL+ M KG N
Sbjct: 264 QKGLMVDAIEVFKQMPDK-GCTPNSI-TYSTIISGLAKATKLDQALELFNEMGHKGFNPD 321
Query: 62 PTLKFFSNALDILVKLNDSTHTV-QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ + L+ + ++ TV +L D + P+ ++YNA++ LC N +
Sbjct: 322 KIYQLLAECLNDDDTIEEAIQTVRKLQD------SGISPHTVLYNAILLGLCRNGKTEFA 375
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
MV G PD LTY ++ E L ++E ++ +
Sbjct: 376 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 421
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A + + +M R P+ V+ + + + R Q+D+AL+ M
Sbjct: 364 GYGKVGDLGSAVEVYQQMT-RLRCPPD-VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 421
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS + L K N S ++L + + + ++ P +YN V+ +LC VD
Sbjct: 422 QPNVYTFSIIIHSLCKQNRSDEAIRLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEA 480
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD TY ++ ++ E FFHEM++ P + I+
Sbjct: 481 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 540
Query: 181 LLDADEP 187
LL A P
Sbjct: 541 LLKAGMP 547
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +N V+ +C V ++M G PD++T+N+I + L + +V
Sbjct: 247 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 306
Query: 159 FHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ ++ P + + I+ A + E A+ ++N ++ +GI+P + NVL+ G
Sbjct: 307 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 366
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+G L ++M R VT L +
Sbjct: 367 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 400
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 11/223 (4%)
Query: 17 EMVER---FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALD 72
E+VER F +P+ V + + L R +V + LR ++ + C P + F++ +
Sbjct: 270 ELVERMNEFGCSPDTV-THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 328
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
K + +++ MV G +MPN + YN ++ D+ + + QM
Sbjct: 329 GYCKAGKLEDAMAVYNDMVASG--IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 386
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE 192
PD +T++ + + + ++ + + +M ++ QP + I L + + AI
Sbjct: 387 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIR 446
Query: 193 IWNYI-LENGILPLEASANVLLVGLRNLGRLSD---VRRFAEE 231
+ N + L I P N ++ L G++ + +R+ EE
Sbjct: 447 LLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE 489
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 5/254 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGKQVDEALKFLRVMKGENCFPTL 64
N+++A+ T F E AY + +LI RG+ D F R ++ P +
Sbjct: 191 ANLLDASATLLSKASEFGCRVE-AYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDV 249
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + + ++ ++L + M G + P+ + +N +V LC N+V
Sbjct: 250 WSFNVVIKGVCRVGQVQKALELVERMNEFGCS--PDTVTHNIIVDGLCRTNEVSRGHEVL 307
Query: 125 DQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ G P+ +T+ + K K+ + +++M+ + P + I
Sbjct: 308 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 367
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+E++ + P + + L+ G G+L D R +M RI T
Sbjct: 368 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 427
Query: 244 MQKLKKAFYNESRS 257
+ + ++RS
Sbjct: 428 FSIIIHSLCKQNRS 441
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + +A G+MVE + P+ + T + L R + EA+ + M + C
Sbjct: 160 GFCHGNRISDAVSLVGQMVE-MGYQPDS-FTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L + ++ L K D + L M + P +++YN ++ LCN +V++
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ--GKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G P+ +TYN + CL + + +MI+ + P + + I
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + A ++++ +++ I P + + L+ G RL + + E M+++
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 241 DVTMQKLKKAFYNESR 256
VT L K F R
Sbjct: 396 VVTYNTLIKGFCKAKR 411
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 4/217 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K + EM++R +P+ + Y + + ++DEA +M ++CFP
Sbjct: 338 KEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + K ++L+ M G L+ N + Y ++ + DN
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRG--LVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV G PD +TY+++ + L N KV F + +++ +P I +
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
A + E +++ + G+ P + ++ G G
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 8/248 (3%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A F EM + P +V+ Y + + L + +A + L M P +
Sbjct: 271 NVNDALNLFTEMDNK-GIRP-NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
FS +D VK +L+D M+ + P++ Y++++ C ++ +D F+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ FP+ +TYN + + K K+V E F EM + + T I A E
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDV 242
+ A ++ ++ +G+LP + ++LL GL N G++ E + + I Y++
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 243 TMQKLKKA 250
++ + KA
Sbjct: 507 MIEGMCKA 514
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 3/243 (1%)
Query: 14 TFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
+ GE ++ + ++ Y + R Q+ AL L M P + ++ L+
Sbjct: 102 SLGEQMQNLGIS-HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
N + V L MV +G+ P+ +N ++ L +N D+MV G
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQ--PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
PD +TY ++ L K + + +M + + +P + T I L + A+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYN 253
+ + GI P + N L+ L N GR SD R +M+ R+I VT L AF
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 254 ESR 256
E +
Sbjct: 339 EGK 341
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 2/224 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + +D AL L+ M+ P + ++ +D L + + L+
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PN++ YN+++ LCN + R M+ P+ +T++ + + +K
Sbjct: 281 EMDNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ E E + EMIK P ++ I D + A ++ ++ P +
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY 252
N L+ G R+ + EM R ++ VT L F+
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y L +L +D A+ ++ P +S + VK N + + L D M
Sbjct: 162 YNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP 221
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLIKNK 150
+ + P+ + YNA++G N + + R ++Q+V GA P+ TYN++ + L K
Sbjct: 222 S--YEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLG 279
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
E + + M+ N QP + T I L + + + A +++ +++ G++P N
Sbjct: 280 MFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYN 339
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLN---RRILIYDVTMQKL 247
LL G + GR+ + +F + M R + Y++ ++ L
Sbjct: 340 SLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGL 379
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 4/197 (2%)
Query: 41 RGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNL 97
R D AL F R+ C P ++ + LD V+ + + + G +
Sbjct: 96 RALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRI 155
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN ++ LC D+D FD + G PD +TY+ + +KN ++
Sbjct: 156 APNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALY 215
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
EM E QP + + E E A+ +W ++ + G P A+ NV+L GL
Sbjct: 216 LLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGL 275
Query: 217 RNLGRLSDVRRFAEEML 233
LG + E M+
Sbjct: 276 CKLGMFKEAGDVWERMV 292
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 7/252 (2%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G + +A K + ++ ++ F+ N H+ Y + + + +A++ M +
Sbjct: 449 GLCKDGRLDDAVKLYEKISMDSFKPN-SHI--YNALINGFCQASKFSDAIRVYSQMAEND 505
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C PT ++ + L K + M+ G M ++ Y +++ LC + +D
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG--CMLDVNTYGSLIRGLCRDKKIDG 563
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI-KNEWQPTPLNCATAI 178
++Q++ G D + +N++ L KV E EM KN P + T +
Sbjct: 564 ALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLM 623
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ + A +W ILENG++P S N + GL + R + + EML I+
Sbjct: 624 DGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGII 683
Query: 239 IYDVTMQKLKKA 250
+T L +A
Sbjct: 684 PTAITWNILVRA 695
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALDILVKLNDSTHTVQLW 87
V+ + + L +VDEA + L MK +N C P + ++ +D + LW
Sbjct: 580 VVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M + L+P++I YN + LC+ N + ++M+ G P ++T+N++ +I
Sbjct: 640 --MAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVI 697
Query: 148 KNKKVH 153
K +
Sbjct: 698 KYGPIQ 703
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 12/239 (5%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMK----GENCFPTLKFFSNALDILVKLNDS 80
NP V ++ L +R ++ +A F + G P L+ ++ L L D
Sbjct: 117 NP-GVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDL 175
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
V L+D + G L P+ I Y+ ++ NN +DN D+M + PD++ YN
Sbjct: 176 DRAVTLFDSLRCRG--LAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF---AIEIWNYI 197
+ +N + + + +++++ +P N AT ML + A ++W +
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGA-SP-NLATYNVMLDGLCKLGMFKEAGDVWERM 291
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N P + ++ GL + R EM+ ++ V L K F + R
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGR 350
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + +V A + + EM+ + P+ V+ Y + L +V EA KF M
Sbjct: 309 GLCRSTDVDSAARVYSEMI-KTGLVPD-VVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG- 365
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ L L LW+++ +L P+++ ++ ++ LC +
Sbjct: 366 IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDD-SLSPDMVTFSTMIHGLCEKGFANKS 424
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G D +Y+ + L K+ ++ + + ++ + ++P I
Sbjct: 425 LQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALING 484
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
A + AI +++ + EN P + N L+ GL + + RF EML + ++
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCML 543
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 11/231 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA EM + + + Y + L + ++V +AL M + C P
Sbjct: 61 KEGRLEEARNVLDEMSGK--GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 118
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ + L K+N + L+ M+ G ++ N I YN ++ + +
Sbjct: 119 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEG--VIANTITYNTLIHAFLRRGAMQEALKL 176
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M+F G D +TYN + + L + + + F +M+ P ++C I L
Sbjct: 177 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 236
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A+E ++ G+ P + N L+ GL GR A+E LN
Sbjct: 237 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR-------AQEALN 280
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 101/275 (36%), Gaps = 39/275 (14%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T ++ L + + A + + M+ + C P + ++ +D K + D
Sbjct: 14 IFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLD 73
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G L N + YN ++ LC + V + F M G PD T+N + L K
Sbjct: 74 EMSGKGLAL--NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 149 NKKVHEVENFFHEM-----IKNE---------------------------WQPTPLNCAT 176
K E + +M I N ++ PL+ T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191
Query: 177 ---AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I L A E + ++ ++ G+ P S N+L+ GL G + F +M+
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251
Query: 234 NRRILIYDVTMQKLKKAFYNESRSMR--DRFDSLE 266
+R + VT L R+ + FD L+
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA K +M+ F P + Y + L R +++ L M + P
Sbjct: 166 RRGAMQEALKLVNDML--FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 223
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L + + H ++ M+ G L P+++ YN+++ LC
Sbjct: 224 NISCNILINGLCRTGNIQHALEFLRDMIHRG--LTPDIVTYNSLINGLCKTGRAQEALNL 281
Query: 124 FDQMVFHGAFPDSLTYNMIFE 144
FD++ G PD++TYN +
Sbjct: 282 FDKLQVEGICPDAITYNTLIS 302
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
VG G P++ YN ++ LC + + ++M G P+ +TY ++ + K
Sbjct: 8 VGCG----PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E N EM + I+ L ++ + A+ ++ + G P + N
Sbjct: 64 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
L+ GL + + + ++ML ++ +T L AF
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 164
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 7/239 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
+ T + R +Q +EALK+ MK E P +++ +D+ ++ V+L++ +
Sbjct: 181 FSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK 240
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ + L + + Y A+ + D ++ + +M G+ P+++ N + L K K
Sbjct: 241 SVNWKL--DTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGK 298
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V++ + F+EM + PTP+ + + M + A E++ + G A N
Sbjct: 299 VNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNS 358
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQK-LKKAFYNESRSMRDRFDSL 265
L+ GR+ +EM N L Y M K + +R M D+ +L
Sbjct: 359 LMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVAL 417
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 4/194 (2%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T + TL + +V++A K M+ PT S +++ ++ ++++ +
Sbjct: 288 TLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTE 347
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G+ ++ +YN+++ V+ +M G PD LTY V
Sbjct: 348 GWKC--DVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVD 405
Query: 154 EVENFFHEMIKNEWQP-TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
F +++ +P TPL I A E E A +I++ ++E+G + + +
Sbjct: 406 PARRMFDKVVALNGKPDTPL-FTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGM 464
Query: 213 LVGLRNLGRLSDVR 226
L+ + + D R
Sbjct: 465 LLSCMAMAKNDDER 478
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/154 (16%), Positives = 64/154 (41%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + P+ ++ ++ + ++F++M G PD +TYN + + + +V+
Sbjct: 171 GRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVN 230
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + ++ W+ + + A + + I++ + ++G P N L+
Sbjct: 231 EAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLM 290
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
L G+++ ++ EM + VT+ L
Sbjct: 291 GTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSIL 324
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 6/268 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG++ A++ M + P +V+ Y T L L ++ ++A + L M +C
Sbjct: 304 GVCKEGHLEVAHEILDRM-PSYGLKP-NVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC 361
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
F+ +D + ++L + M+ G +P++I Y V+ C +D
Sbjct: 362 PLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG--CVPDVITYTTVINGFCKEGLIDEA 419
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G P++++Y ++ + L ++ + E+ +MI+ P P+ T I
Sbjct: 420 VMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINF 479
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E AIE+ +L NG P S + ++ GL G+ + M+N+ +
Sbjct: 480 LCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539
Query: 241 DVTMQKLKKAFYNESRSMR--DRFDSLE 266
+ + A E R R FD+++
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQ 567
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G V +A + +M+ +++Y T + L + + DEAL+ L VM + P
Sbjct: 482 KKGLVEQAIELLKQML--LNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S+ L K +Q++D + + + + ++YNAV+ LC D F
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDV--TIRSDAVLYNAVISSLCKRGGTDRAIEF 597
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
MV G P+ TY ++ L V E + E+
Sbjct: 598 LAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 3/216 (1%)
Query: 41 RGKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
+G VDEAL+ LR + C P + ++ L L L + MV +G P
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCP--P 258
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N++ +N ++G LC N + V + QMV HG PD Y + + + K +
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL 318
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M +P + T + L A+ E A E+ + +N + + N+L+
Sbjct: 319 DRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQN 378
Query: 220 GRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G + V E+ML + +T + F E
Sbjct: 379 GLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + A + M R + P+ ++ Y + +L +++ ALK L + +NC
Sbjct: 146 GFCKVNRIEAATQVLNRMKAR-GFLPD-IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ + ++L + M+ G L+P++ YNA++ +C D
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARG--LLPDMYTYNAIIRGMCKEGMWDEG 261
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G P+ +TY+++ L + ++ E + MI+ E P + I+
Sbjct: 262 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 321
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L + AI I +Y++ NG LP + N +L L
Sbjct: 322 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 357
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 18/224 (8%)
Query: 23 EWNPEHVLAY---ETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILV 75
E P H+ +Y ET L+ L+ + + +E+L FL + + P + + +
Sbjct: 55 EARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFF 114
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
+ ++ +I+ + P++ YNAV+ C N ++ + ++M G PD
Sbjct: 115 NFKNIEKASRVMEILES---HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPD 171
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AI 191
+TYN++ L +K+ +++ + PT T+L++A E A+
Sbjct: 172 IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPT----VITYTILIEATIVEGGINEAM 227
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++ +L G+LP + N ++ G+ G + + EM +R
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSR 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + EA K EM+ R + Y + + + DE K + M C P
Sbjct: 220 EGGINEAMKLLEEMLARGLL--PDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNK 277
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+S + L + + + +M I L P+ Y+ ++ LC +D
Sbjct: 278 VTYSILISSLCRFGRIDEAISVLKVM--IEKELTPDTYSYDPLISALCKEGRLDLAIGIM 335
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
D M+ +G PD + YN I L KN ++ F+++
Sbjct: 336 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 373
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG E K EM R P V Y + +L R ++DEA+ L+VM +
Sbjct: 251 GMCKEGMWDEGEKLVAEMFSR-GCEPNKV-TYSILISSLCRFGRIDEAISVLKVMIEKEL 308
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + L K + + D M+ G +P+++ YN ++ LC N + +
Sbjct: 309 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG--CLPDIVNYNTILAALCKNGNANQA 366
Query: 121 FRFFDQMVFHGAFPD 135
F+++ G P+
Sbjct: 367 LEIFNKLRGMGCPPN 381
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 2/194 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V AY + + +++ A + L MK P + ++ + L +++ D
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLD 196
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ + N MP +I Y ++ ++ + ++M+ G PD TYN I + K
Sbjct: 197 QL--LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
E E EM +P + + I+ L + AI + ++E + P S
Sbjct: 255 EGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 314
Query: 209 ANVLLVGLRNLGRL 222
+ L+ L GRL
Sbjct: 315 YDPLISALCKEGRL 328
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + I ++EA+K L M P + ++ + + K +L
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVA 266
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G PN + Y+ ++ LC +D M+ PD+ +Y+ + L K
Sbjct: 267 EMFSRGCE--PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 324
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
++ MI N P +N T + L A+EI+N + G P
Sbjct: 325 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
W N+VEA + + EM+E P+ V+ + T + L+RG++ EA+K +MK +
Sbjct: 333 AWCNARNLVEAGRVWNEMLEN-GLKPD-VVVHNTMIEGLLRGQRRPEAVKMFELMKAKGP 390
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ ++ M +G P++ Y ++ N +D V
Sbjct: 391 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVG--CQPDVATYTCLLVGYGNAKRMDRV 448
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI-T 179
++M G PD TYN + + L + + +MIK +PT + +
Sbjct: 449 TALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 508
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L +W + GI P S V + G GR + ++ EEM+ + +
Sbjct: 509 YFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKT 568
Query: 240 YDVTMQKLKKAF 251
+ K F
Sbjct: 569 PQIDYNKFAADF 580
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG EAN+ F M +R+ + + +Y ++ + + EA + M P
Sbjct: 302 QEGLGREANQVFDRMRDRYAPD---LRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPD 358
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + ++ L++ V+++++M G PN+ Y ++ C +D R
Sbjct: 359 VVVHNTMIEGLLRGQRRPEAVKMFELMKAKG--PAPNVWTYTMLIRDHCKRGKMDMAMRC 416
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++M G PD TY + K++ V EM + P I +L +
Sbjct: 417 FEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTN 476
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLL----VGLRN 218
+ P+ A I+ +++ G+ P + N+++ +G RN
Sbjct: 477 RNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRN 515
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE M P
Sbjct: 135 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPD 192
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 251 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCK 310
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I E + L+ G GR D + EML+
Sbjct: 311 EGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLS 361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 101 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 158
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D F M+ G PD TY+++ L K K+ + F E
Sbjct: 159 VSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 218
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 278
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 279 LKQAHHLIDEM 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++ D L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 156 PSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASG--VQPDVYTYSVLINGLCKESKMDDAN 213
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + +
Sbjct: 274 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDE 333
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 334 VAYTALISGXCQEGRSV 350
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 59/139 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL 180
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 181 KSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 219 LGRLSDVRRFAEEMLNRRI 237
GR+ ++ML++ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSL 259
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K EA EMV + + Y T + + K+ D+AL+ +
Sbjct: 63 GLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 120
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S +D L K + L+ M+ G + MPN + YN+++ C +D
Sbjct: 121 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G+ PD +TY + K ++ + + ++M + P + + +
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA-EEM 232
L + A+ I + P + N +L G + +L + R+F EEM
Sbjct: 240 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
+ G V+ E P V Y + + L + ++ EA L M C P + ++
Sbjct: 37 GRRGCGAAVQDAEEVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 95
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ K S +++++ +V GF P+++ Y+ ++ LC + F +M+
Sbjct: 96 ITGFCKSKKSDDALRVFEQLVARGFR--PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153
Query: 131 GA-FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G+ P+++TYN + + K+ E N M + P + T + +
Sbjct: 154 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 213
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A ++ N + G+ P + L+ GL RLSD EM
Sbjct: 214 AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEM 256
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 82 HTVQLWDIMVGIGFNL-----MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+Q W G G + +P + YN+++ LC + ++MV+ G PD
Sbjct: 30 RALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 89
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
TY + K+KK + F +++ ++P + + I L + AI+++
Sbjct: 90 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 149
Query: 197 ILENG-ILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKK 249
++++G +P + N L+ G +G++ + + R AE + ++ Y M K
Sbjct: 150 MIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN--DSTHTVQ 85
+V+ + + + L R ++ +A+ L M+ ++C PT+ ++ LD ++N +
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM 288
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L ++ + PN++ +N ++ LC N ++ PD + Y + +
Sbjct: 289 LEEM------DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342
Query: 146 LIKNKKVHEVENFFHEMIK 164
L + KKV E + +M++
Sbjct: 343 LCREKKVDEACRVYRKMLE 361
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+GN +A F M+++ P+ V + + L + ++ EA+ + +
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVL-PD-VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL 648
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L K D +L D M G N PN++ YNA++ LC ++
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN--PNIVTYNALINGLCKLGEIAKA 706
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD + G +S+TY+ I K+ + E FH M P I
Sbjct: 707 RELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDG 766
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A E A+ ++ ++E GI A N L+ G LG+L + + E+M++ I
Sbjct: 767 CCKAGNTEKALSLFLGMVEEGIASTPA-FNALIDGFFKLGKLIEAYQLVEDMVDNHITPN 825
Query: 241 DVT 243
VT
Sbjct: 826 HVT 828
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 13/266 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG EA K G M ++ +P+ V Y T +I + +++E +L M +
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQ-GLSPD-VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + + + + + + M+ G + PN ++ ++ C + +
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG--IAPNDVICTDLIDGYCKDGNTTKA 601
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F M+ G PD T++++ L KN K+ E F E++ P + I+
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF----AEEMLNRR 236
L + + A E+ + + + GI P + N L+ GL LG ++ R E+ L R
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721
Query: 237 ILIYDVTMQKLKKAFYNESRSMRDRF 262
+ Y + A Y +S ++ + F
Sbjct: 722 SVTYSTII-----AGYCKSANLTEAF 742
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ +A F EM P+ + Y + + + +++A + L +K EN
Sbjct: 381 GLCKIGDLEKAEDLFSEMT-MMGIKPD-IQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ L D T +L+ M+ G L PN+++Y +V L +
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWG--LKPNIVIYTTIVKGLVKEGRFEEA 496
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD YN + K K+ E +++ EMI +P I
Sbjct: 497 IKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A E + A + +L++GI P + L+ G G + ML++ +L
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVL 614
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 105/302 (34%), Gaps = 74/302 (24%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V E +M E+ +++ Y + L R VDEAL+ R M + P
Sbjct: 246 GKVEEGKHVLFDMEEK--GCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNY 303
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR--- 122
++ +D + ST + D M +G L P+ + Y A++ +D+ F+
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTMG--LKPDHVAYTALINGFVKQSDIGGAFQVKE 361
Query: 123 --------------------------------FFDQMVFHGAFPDSLTYNMI-------- 142
F +M G PD TYN +
Sbjct: 362 EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421
Query: 143 -----FECLIKNKKVHEVEN----------------------FFHEMIKNEWQPTPLNCA 175
+E LI+ KK + N F EMI +P +
Sbjct: 422 NMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYT 481
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
T + L+ E AI+I + + G+ P N +++G G++ + + + EM+ +
Sbjct: 482 TIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK 541
Query: 236 RI 237
+
Sbjct: 542 GL 543
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 15/262 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K N+ EA + F M + P Y + + ++AL M E
Sbjct: 731 GYCKSANLTEAFQLFHGM--KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Query: 61 FPTLKFFSNAL-DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
T F NAL D KL QL + MV ++ PN + Y ++ C ++
Sbjct: 789 ASTPAF--NALIDGFFKLGKLIEAYQLVEDMVD--NHITPNHVTYTILIEYHCTVGNIKE 844
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ F +M P+ LTY + + + E+ + F EM+ +P L A +
Sbjct: 845 AEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDL----AWS 900
Query: 180 MLLDADEPEF----AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+++DA E A+++ + +L G+ + +L+ L LS+V + +E+ +
Sbjct: 901 VMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960
Query: 236 RILIYDVTMQKLKKAFYNESRS 257
+ T L F+ R+
Sbjct: 961 GSKLSLATCGTLVCCFHRAGRT 982
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 2/187 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + R +V+E L M+ + C P L +S + L + D ++L
Sbjct: 232 VYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKR 291
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L+P+ +Y ++ C D+M G PD + Y + +K
Sbjct: 292 SMANKG--LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ EM + + I L + E A ++++ + GI P +
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409
Query: 209 ANVLLVG 215
N L+ G
Sbjct: 410 YNCLIEG 416
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 8/231 (3%)
Query: 8 VVEANKTFGEMVERFEWNPEH------VLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
V++ K G ++ F+W E V Y T + + R + + + L+ M+ E C
Sbjct: 40 VLKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCE 99
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + ++ + + N ++++ M G + P+ + Y +V L DN
Sbjct: 100 PCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCS--PDRVTYCTLVDLHSKAGFHDNAM 157
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ +M G PD+ TY++I CL K KV E F EM++ + P+ + I +
Sbjct: 158 DMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQ 217
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A++++N + + G P + ++++ L +G L + EM
Sbjct: 218 AKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEM 268
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + F +M E +P+ V Y T + + D A+ + M+ P +S
Sbjct: 120 EAMRIFYQMQEE-GCSPDRV-TYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSV 177
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L K + ++L++ MV GF P+L+ YN ++ L + + + ++ M
Sbjct: 178 IIHCLGKAGKVSEALKLFEEMVERGF--APSLVTYNIIIDLQAKSGNYVMAMKLYNDMQD 235
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD +TY+++ E L + + E E F+EM + W P + M A E
Sbjct: 236 AGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAER 295
Query: 190 AIEIWNYILENGILPLEASANVLL 213
A+E + +L++G+ P +N LL
Sbjct: 296 ALEWYQKMLDSGLTPNVQISNSLL 319
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 61/136 (44%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
++ Y ++G++ + + R +M G P +TYN + + + E F
Sbjct: 66 DVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIF 125
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
++M + P + T + + A + A++++ + + G P + +V++ L
Sbjct: 126 YQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKA 185
Query: 220 GRLSDVRRFAEEMLNR 235
G++S+ + EEM+ R
Sbjct: 186 GKVSEALKLFEEMVER 201
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + VM+ P
Sbjct: 148 KEGEIRLAQSVF-DSITKWGLRPS-VVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTHSVLINGLCKESKMDDANELFDEMLBNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 264 YRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +K+ D +L +M G + P++ ++ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASG--VQPDVYTHSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
L E RS+
Sbjct: 347 XAYTALISGLCQEGRSV 363
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EMI +P T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + VK + ++D + G L P+++ +N ++ D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSVVSFNTLMNGYIKLGD 186
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ FR + M G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I + A+EI+ +L + P + N L+ GL G L + +EM+
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ ++E + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EMI +P T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + VK + ++D + G L P+++ +N ++ D
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG--LRPSVVSFNTLMNGYIKLGD 186
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ FR + M G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I + A+EI+ +L + P + N L+ GL G L + +EM+
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMI 303
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA + + EM+ R + + Y + + + ++D A +M + C P
Sbjct: 335 KEGKFFEAAELYDEMLPR--GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D ++L M G L+ N + YN ++ C D++
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRG--LVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ G PD +T N + + L N K+ + F M K++ M LD
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK-------------MDLD 497
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A P NG+ P + N+L+ GL N G+ + EEM +R I+ +T
Sbjct: 498 ASHPF-----------NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 244 MQKLKKAFYNESR 256
+ +SR
Sbjct: 547 YSSMIDGLCKQSR 559
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG VVEA MVE P+ + Y TF+ + + AL LR M+ +
Sbjct: 191 GLCREGRVVEAVALLDRMVEN-GLQPDQI-TYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + + L+ M G + PN++ YN ++G C +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG--IFPNIVTYNCMIGGFCISGRWSA 306
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M+ P+ +TYN + +K K E + EM+ P + + I
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
D + A +++ + G P + L+ G R+ D EM R ++
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 240 YDVTMQKLKKAF 251
VT L F
Sbjct: 427 NTVTYNTLIHGF 438
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 16/255 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + A F M + +P+ V + T + K++D+ ++ L M
Sbjct: 367 GFCKQDRLDAAEDMFYLMATK-GCSPD-VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ + + D + L M+ G + P+++ N ++ LC+N + +
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG--VCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 121 FRFFDQM-----------VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M F+G PD LTYN++ LI K E E + EM P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ ++ I L + A +++ + P + N L+ G GR+ D
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 230 EEMLNRRILIYDVTM 244
EM RR ++ D +
Sbjct: 603 CEM-GRRGIVADAII 616
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 95/248 (38%), Gaps = 46/248 (18%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG++ + +P+ V+ + T L L +V EAL + C P + F+
Sbjct: 135 ALSTFGKLT-KLGLHPD-VVTFTTLLHGLCLDHRVSEALDLFH----QICRPDVLTFTTL 188
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D MV G L P+ I Y V +C D + +M +
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENG--LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + N F EM
Sbjct: 247 SH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-------------------------- 279
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
+ GI P + N ++ G GR S +R +EML R+I VT L
Sbjct: 280 ---------QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Query: 249 KAFYNESR 256
AF E +
Sbjct: 331 NAFVKEGK 338
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YN ++ L N +++M G PD++TY+ + + L K ++ E
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + P + T I A + +E++ + GI+ L+ G R
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+G ++ +EM++ + +T++ + F+++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 6/176 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y + LI + EA + M P +S+ +D L K + Q++
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ +N ++ C VD+ F +M G D++ Y + K
Sbjct: 569 SMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI----EIWNYILEN 200
++ + F EMI + P + +T +E E A+ ++ Y LE+
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLED 682
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/212 (17%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F+ + +V++ + L+ M + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK--QIRCDIY 117
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ ++ C+ + + F ++ G PD +T+ + L + +V E + FH++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG-- 220
+ P L T + L A+ + + ++ENG+ P + + + G+ +G
Sbjct: 178 CR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233
Query: 221 --RLSDVRRFAE-EMLNRRILIYDVTMQKLKK 249
L+ +R+ E + ++IY + L K
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 7/237 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
W N+VEA + + EM+E+ P+ V+ + T + L+RG++ EA+K +MK +
Sbjct: 338 AWCNARNLVEAGRVWNEMLEK-GMKPD-VVVHNTMIEGLLRGQRQHEAVKMFELMKAKGP 395
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + K ++ ++ M P++ Y ++ N +D V
Sbjct: 396 PPNVWTYTMLICNHCKRGKMDMAMECFEEMQEA--RCQPDVATYTCLLVGYGNAKRMDRV 453
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT--PLNCATAI 178
++M G PD+ TYN + + L K + + +MIK PT N
Sbjct: 454 TAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKS 513
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + +W + GI P S V + G GR + ++ EEM+N+
Sbjct: 514 YFLGDRNY-AMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINK 569
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
Q++D M+G P+L Y A++ CN ++ R +++M+ G PD + +N + E
Sbjct: 316 QVFDKMLG---QYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIE 372
Query: 145 CLIKNKKVHEVENFFHEMIK------NEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
L++ ++ HE F E++K N W T L C +D A+E + +
Sbjct: 373 GLLRGQRQHEAVKMF-ELMKAKGPPPNVWTYTMLICNHCKRGKMD-----MAMECFEEMQ 426
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
E P A+ LLVG N R+ V EEM + T L K N R M
Sbjct: 427 EARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTN--RKM 484
Query: 259 RD 260
D
Sbjct: 485 PD 486
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA F EMV + NP+ V + + L + + A L VM +
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLK-NINPD-VYTFSILVDALCKDGNITRAKNMLAVMMKQGV 300
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D +N+ ++ M +G + P+ YN ++ L VD
Sbjct: 301 IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG--VAPHAHSYNIMINGLGKIKMVDEA 358
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M G PD++TYN + + L K ++ EM N L + I +
Sbjct: 359 LSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDV 418
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI- 239
L + AI + I + GI P + N+L+ GL GRL + + +++L + +
Sbjct: 419 LCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVN 478
Query: 240 ---YDVTMQKL-KKAFYNESRSMRDRFDS 264
Y++ + L K+ +NE+ + + ++
Sbjct: 479 AWTYNIMINGLCKEGLFNEAEVLLSKMEN 507
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 16 GEMVERFEWNPEHVLA---------YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
G++ E ++ +HV+A Y T + L + + AL+ L+ ++G+ +
Sbjct: 143 GKLKEALHFH-DHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVM 201
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ ++ L K + QL+ M I + P+++ +N+++ C + F F +
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEM--ITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHE 259
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV PD T++++ + L K+ + +N M+K P + ++ + +E
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNE 319
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK 246
A +++ + G+ P S N+++ GL + + + +EM + I VT
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379
Query: 247 L 247
L
Sbjct: 380 L 380
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 39/238 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ V +A F M R P H +Y + L + K VDEAL + M +
Sbjct: 313 GYCLVNEVNKAKHVFSTM-SRLGVAP-HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI 370
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD-- 118
P +++ +D L KL ++ QL D M G + +++ YN+++ +LC N+ +D
Sbjct: 371 APDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG--IPADILTYNSLIDVLCKNHHIDKA 428
Query: 119 ---------------------------------NVFRFFDQMVFHGAFPDSLTYNMIFEC 145
N F ++ G ++ TYN++
Sbjct: 429 IALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K +E E +M N P + T I L DE E A ++ ++ G+L
Sbjct: 489 LCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 99 PNLIMYNAVVGLL--CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
P+++ +N ++G + NNN Q+ G P +T+N++ C ++
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ F +++K + PT + T I + + + A+ ++++ G + S L+ GL
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174
Query: 217 RNLGR----LSDVRRFAEEMLNRRILIYDVTMQKLKK 249
+G L +++ +++N +++Y++ + L K
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK 211
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 7/194 (3%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
KL ++ H D ++ +GF+L + + Y ++ LC + + ++ D
Sbjct: 144 KLKEALH---FHDHVIALGFHL--DQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTD 198
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+ YN+I L K+K V + + EMI P + + I + + A +++
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF--YN 253
++ I P + ++L+ L G ++ + M+ + ++ VT L + N
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318
Query: 254 ESRSMRDRFDSLER 267
E + F ++ R
Sbjct: 319 EVNKAKHVFSTMSR 332
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 48 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
A+ R + + FPT+K + L LVK N+ + +++ M + P++ +++
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ---GVSPDVYLFSTA 252
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ C V++ + F M G P+ +TYN + L K+ + E F +M+K+
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
T + + I L+ ++ A + LE G P E N L+ G +G L D R
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 228 FAEEMLNRRILIYDVTMQKLKKAF 251
+M+++ I VT+ + + F
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGF 396
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 39/288 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G V +A + F +M E+ +P +V+ Y + L + +DEA +F M + T
Sbjct: 258 KGGKVEDAIQLFFDM-EKLGVSP-NVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
L +S ++ L+KL + + GF PN ++YN ++ C ++ + R
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFT--PNEVVYNTLIDGYCKMGNLGDALRI 373
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI----- 178
MV G P+S+T N I + K ++ + E EM+ + P T I
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433
Query: 179 ------------TMLLDADEP------------------EFAIEIWNYILENGILPLEAS 208
MLL P A+E+W +LE G +
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N L+ GL G + + R ++ML R ++ +T L E +
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 112/307 (36%), Gaps = 72/307 (23%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ K G + +A EM+ R F NP A+ T + L + + AL+FLR M N
Sbjct: 395 GFCKIGQMEQAECILEEMLSRGFSINPG---AFTTIIHWLCMNSRFESALRFLREMLLRN 451
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMP------------------ 99
P + + L K + V+LW ++ G G NL+
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 100 -------------NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ I YN ++ C V+ F+ +MV G PD+ TYN++ +
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL-------- 198
+ K+ E N ++E + P I AD+ E +++ +L
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631
Query: 199 ---------------------------ENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
GI P A+ + L+ G+ N+GR+ D + +E
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691
Query: 232 MLNRRIL 238
M +L
Sbjct: 692 MRKEGLL 698
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 111/290 (38%), Gaps = 39/290 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V E K GEMV++ P+ Y + + R ++DEA+ K +
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQ-GIEPD-TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592
Query: 61 FPTL--------------------KFFSNALDILVKLN---------------DSTHTVQ 85
P + K F+ L ++LN ++ +
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M G + P Y++++ +CN +++ D+M G P+ + Y +
Sbjct: 653 LHDDMRSKG--IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K ++ +V N EM + P + I + + + A ++ + ++ GI+P
Sbjct: 711 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ NVL G G++ + + + M + + ++T L + S
Sbjct: 771 TVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPS 820
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW GNV EA + + +++ + P+ V Y TF+ L ++ A+K M C
Sbjct: 150 GWCVLGNVREAKRFWKDIIAS-KCKPD-VFTYGTFIKALTNKGKLGTAMKLYEAMWKMQC 207
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D L + +++ M G +PN+ YN+++ +C ++ V
Sbjct: 208 KPDVVICNCVIDALCFKKRVPEALAVFEGMKERG--CIPNVATYNSLIKHMCKIGRMEKV 265
Query: 121 FRFFDQMVFH--GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ D+M PD +T+N + + L KK EV M N + C +
Sbjct: 266 YELLDEMQEKKGSCMPDEITFNYLLKSL---KKPEEVAGVLERMKINGCKMNNDTCNLLL 322
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR--- 235
+ D D E W + +NG+ S +++ L + GR+ D R+ EM N+
Sbjct: 323 KLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWLYDKGRVEDALRYFGEMENKGMV 382
Query: 236 -----RILIYDVTMQKLKKAFYNESRS 257
+IL + +K K+A E +
Sbjct: 383 PEPRTKILCNSMNTRKQKEAEEGEKSA 409
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N V+ C +V RF+ ++ PD TY + L K+ + M K
Sbjct: 145 NIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWK 204
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ +P + C I L A+ ++ + E G +P A+ N L+ + +GR+
Sbjct: 205 MQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSLIKHMCKIGRMEK 264
Query: 225 VRRFAEEMLNRR 236
V +EM ++
Sbjct: 265 VYELLDEMQEKK 276
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + A K EM++ + PE+ Y + + V EA M+ E
Sbjct: 264 GWCRARDPKRAMKVLEEMIQ-MKHTPEN-FTYNAAIDSFCSAGLVSEARDLFEFMRTEGS 321
Query: 61 F---PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K +S + L K +L M G MP++ Y ++ + + +
Sbjct: 322 TISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCG--CMPDVSTYKDLIEGMLLVDKL 379
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D + D+M G PD +TYN + L +K + MI+ +P+
Sbjct: 380 DAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNML 439
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M + EP+ AI IW + + G + ++ GL + GR D +E++NR +
Sbjct: 440 MVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGM 499
Query: 238 LI----YDVTMQKLKK-----AFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D M +L A + S MR ++ ++ RR+ +Q
Sbjct: 500 KLSYKKFDAIMLRLSAVGNLGAIHRLSEHMRRFYNVAMSRRFAITQ 545
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F +M +RF P+ + L + + D+ +F + M G PT+
Sbjct: 74 GMLEEAIQCFSKM-KRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 131
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + K D L++ M G L+P+ + YN+++ +D+ FF+
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRG--LVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TYN + C K K+ F+ EM N +P ++ +T +
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ AI+ + + G++P E + L+ +G LSD R EML
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
++ LI ++EA++ MK FP + + L KL + + + M+
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G P + YN ++ +C DV+ F++M F G PD++TYN + + K +
Sbjct: 123 GAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + FF EM +P + I + +E + + NG+ P S +
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ G + +F +M RR+
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDM--RRV 264
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG+V A F EM +F + Y + + + ++D+ + F MK C P
Sbjct: 142 KEGDVEAARGLFEEM--KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 199
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++ + M G G L PN++ Y+ +V C + +F
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNG--LKPNVVSYSTLVDAFCKEGMMQQAIKF 257
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M G P+ TY + + K + + +EM++ + + I L D
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVG 215
A+ + A E++ + G++P AS N L+ G
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V++Y T + + + +A+KF M+ P +++ +D K+ + + +L
Sbjct: 234 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 293
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ +G N++ Y A++ LC+ + F +M G P+ +YN + +
Sbjct: 294 NEMLQVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K K + +E+ +P L T I L ++ E A + N + E GI
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%)
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ + +A +L ++ S ++D++ +P +++A+ +L + ++ + F
Sbjct: 24 RMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCF 83
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M FP + + N + K K +V+ FF +MI +PT I +
Sbjct: 84 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 143
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A ++ + G++P + N ++ G +GRL D F EEM
Sbjct: 144 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 1/212 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L Y T + + E L L MK + T+ F +D L K + V ++
Sbjct: 411 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN- 469
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ F L N ++ A++ LC +N V+ F+QMV G PD Y + + K
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V E +M + + L + + L ++ + A ++ GI P E
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 589
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+L LG + + ++ ++L D
Sbjct: 590 ISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 621
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 4 KEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K GN+ +A + EM++ EWN V+ Y + L +++ EA + M P
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWN---VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
L ++ + VK + ++L + + G G + P+L++Y + LC+ ++
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRG--IKPDLLLYGTFIWGLCSLEKIEAAKV 396
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M G +SL Y + + K+ E + EM + + + T + I L
Sbjct: 397 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 456
Query: 183 DADEPEFAIEIWNYILENGILPLEASANV 211
A++ +N I + L+A+A +
Sbjct: 457 KNKLVSKAVDYFNRISND--FGLQANAAI 483
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 5/240 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA M + N V++Y + + + +++AL FLR M+ PT
Sbjct: 22 KAGMLAEAESYLKRMPQHCAPN---VVSYNIIIDGYCKARNIEKALAFLREMEELGHPPT 78
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S+ + K + + + ++ M G P+++ +N ++ L +
Sbjct: 79 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE--PDIVNFNVLLSGLWRARKIHEAREL 136
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F M G PD +TYN + L K KK+ E M + + PT + T I L
Sbjct: 137 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 196
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A E++ + E E + +VL L+ G+L + R +M + + + D T
Sbjct: 197 FTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNT 256
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G VEA K EM+ + + P+ AY + L + ++ EA + + M+G PT+
Sbjct: 268 DGGNVEAAKLVTEMMGK-KIAPDF-YAYSILINGLCKARRPGEAKEMFQEMRGRGISPTV 325
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L+ L+ ++L M+ G +P+ YN ++ C N D + + F
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQG--RLPDTCSYNLMIRGFCANGDTNEAYCLF 383
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI--KNEWQPTP--LNCATAITM 180
M+ G ++ TYN + IK++ F M KN+ P P I+
Sbjct: 384 QDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISS 443
Query: 181 LLDADEPEFAIEIWNYILENGILP-----------------------------------L 205
L D+ E A ++ + + + G +P L
Sbjct: 444 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 503
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
S+N+LL G+ G + + + F ++M + I+ T KL
Sbjct: 504 VGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 36/264 (13%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA + F M R P+ V+ Y T + L + K++DEA+ L MK E+ PT ++
Sbjct: 132 EARELFRSMNSR-GCKPD-VVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 189
Query: 70 ALDILVKLNDSTHTVQLWDIMV-----------GIGFNLMP---NLIMYNAVVGLLCNNN 115
+D L K ++++ M + FN + L+ + V +C N
Sbjct: 190 LIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKN 249
Query: 116 DV--DNVF------------------RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
DN + + +M+ PD Y+++ L K ++ E
Sbjct: 250 VCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEA 309
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F EM PT + T + LL + + A+E+ ++L+ G LP S N+++ G
Sbjct: 310 KEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRG 369
Query: 216 LRNLGRLSDVRRFAEEMLNRRILI 239
G ++ ++M+ I++
Sbjct: 370 FCANGDTNEAYCLFQDMIKDGIVL 393
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L PN I+YN ++ LC + + +M H A P+ ++YN+I + K + + +
Sbjct: 5 GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKA 63
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F EM + PTP ++ + A++++ + G P + NVLL G
Sbjct: 64 LAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 123
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
L ++ + R M +R
Sbjct: 124 LWRARKIHEARELFRSMNSR 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 7/222 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++ YE + +L + QV+EA K L M+ + P+LK + L L + +L+
Sbjct: 433 NMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELY 492
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M I N + N ++ + VD F QM G PD TY+ + L
Sbjct: 493 KEMSRI--NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 550
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + E++++ +P + L + + A E + ++ G+
Sbjct: 551 WQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLG 610
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
N L+ L R D +M+ +R + DV +++++K
Sbjct: 611 MHNTLVTSC-CLARKLDYL----DMIEQREGVPDVIVERIEK 647
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + IR +DE + M P
Sbjct: 140 KEGEIRVARSVF-DAITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPD 197
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 198 VYTYSVLINGLCKESKIDGANELFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 255
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ D +TYN + L K + + +N EM +P + T I
Sbjct: 256 YKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCK 315
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 316 EGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLS 366
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G P++ Y+ ++ LC + +D
Sbjct: 161 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVE--PDVYTYSVLINGLCKESKIDGAN 218
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ + T I L
Sbjct: 219 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 278
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A + + + G+ P + + L+ G G L + M+ I + D
Sbjct: 279 CKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 338
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 339 VVYTTLISGLCQEGRSV 355
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 33 ETFLITLIR--GKQ--VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ F +LIR GK E+++ MK P++ F++ L IL+K + ++D
Sbjct: 156 DRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFD 215
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ + + P+ +N ++ C N+ VD FRFF +M PD +TYN + + L +
Sbjct: 216 EMLST-YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274
Query: 149 NKKVHEVENFFHEMIKNE--WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
KV+ N + M+K P + T + E + A+ ++ ++ G+ P E
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV-TMQKLKKAFYN 253
+ N L+ GL + ++ +++ E L I D T+ L A N
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 43/234 (18%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMKGEN 59
K G A F EM+ + P+ TF I LIRG VDE +F + M
Sbjct: 203 KRGRTNMAQSVFDEMLSTYGVTPDTY----TFNI-LIRGFCKNSMVDEGFRFFKEMSRFK 257
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P L ++ +D L + + + MV NL P+++ Y +V C +++D
Sbjct: 258 CDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDE 317
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F++MV G P+ +TYN + + L + +K+ +++ F +
Sbjct: 318 ALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGG-------------- 363
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
G +P + N L+ N G L+D E+M+
Sbjct: 364 --------------------GGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G + G V A+ MV++ NP+ V+ Y T + ++DEAL M +
Sbjct: 271 GLCRAGKVNIAHNVVNGMVKKSTNLNPD-VVTYTTLVRGYCMKHEIDEALVVFEEMVSKG 329
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ + L ++ Q+++ +G G +P+ N ++ CN ++++
Sbjct: 330 LKPNEITYNTLIKGLCEVQKIDKIKQIFEGALG-GGGFIPDTCTLNTLMNAHCNAGNLND 388
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
F++M+ PDS TY+++ L + E F E+ + E
Sbjct: 389 ALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKE 435
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V +A F E + + P V ++ T + + ++E + VM+ FP
Sbjct: 244 KEGKVKDAQLIFDE-IRKTGLQPTAV-SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPD 301
Query: 64 LKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S +D L K L D+ H L+ M G L+PN + + ++ C N VD
Sbjct: 302 VFTYSALIDGLCKECQLEDANH---LFKEMCDRG--LVPNDVTFTTLINGQCKNGRVDLA 356
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ QM G D + YN + + L K E F EM K P T +
Sbjct: 357 LEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG 416
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ E A+E+ +++ GI + ++ GL G++ D R EML
Sbjct: 417 SCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 5/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V A + + +M + + VL Y T + L +G EA KF+ M
Sbjct: 346 GQCKNGRVDLALEIYQQMFTK-GLKADLVL-YNTLIDGLCKGGYFREARKFVGEMTKRGL 403
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ LD K D +++ MV G L + + + A++ LC + + +
Sbjct: 404 IPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQL--DNVAFTAIISGLCRDGKIVDA 461
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R +M+ G PD TY M+ + K V EM + P + +
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNG 521
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM-LNRRILI 239
L + + A + N +L G++P + + N+LL G G+L D + EM L
Sbjct: 522 LCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYAS 581
Query: 240 YDVTMQKLKKA 250
Y + +L KA
Sbjct: 582 YRSLLHELSKA 592
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L P + +N ++ C + +++ FR M FPD TY+ + + L K ++ +
Sbjct: 262 GLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDA 321
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ F EM P + T I + A+EI+ + G+ N L+ G
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381
Query: 216 LRNLGRLSDVRRFAEEMLNRRIL 238
L G + R+F EM R ++
Sbjct: 382 LCKGGYFREARKFVGEMTKRGLI 404
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK----QVDEALKFLRVMK 56
G KE + +AN F EM +R ++ + TLI G+ +VD AL+ + M
Sbjct: 311 GLCKECQLEDANHLFKEMCDR------GLVPNDVTFTTLINGQCKNGRVDLALEIYQQMF 364
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ L ++ +D L K + M G L+P+ Y ++ C D
Sbjct: 365 TKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG--LIPDKFTYTTLLDGSCKEGD 422
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +MV G D++ + I L ++ K+ + E EM++ +P
Sbjct: 423 LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTM 482
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ + + ++ + +G +P + NVL+ GL G++ + MLN
Sbjct: 483 VMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542
Query: 237 ILIYDVT 243
++ D+T
Sbjct: 543 VVPDDIT 549
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+ +++ G P+ T+N++ L K KV + + F E+ K QPT ++ T I
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ E + + E + P + + L+ GL +L D +EM +R ++
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335
Query: 240 YDVTMQKL 247
DVT L
Sbjct: 336 NDVTFTTL 343
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA F EMV + P V+ Y T + L R D+ALK M
Sbjct: 206 GLCRRGRLAEALDMFSEMVGKC-IAPT-VVTYTTVIHWLAREGCFDDALKIFHEMGRRGV 263
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S+ +D L K +T ++L D M I +PN+I Y++V+ LC + +
Sbjct: 264 SPNLVTYSSLIDGLCKGGRATSALELLDRM--IKEKKLPNMITYSSVIDGLCKEHMLSEA 321
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA----- 175
D+M G PD+ + + L + E N+ EM+ +P + +
Sbjct: 322 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARI 381
Query: 176 --TAITMLLDADEPEFAIEIWNYILENGI 202
T +T L D E A +++ I
Sbjct: 382 NNTVLTALCDKGELGRAFQVYQSTRTRSI 410
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 17/252 (6%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V +Y T + L R ++ EAL M G+ PT+ ++ + L + ++++
Sbjct: 197 VCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFH 256
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PNL+ Y++++ LC + D+M+ P+ +TY+ + + L K
Sbjct: 257 EMGRRGVS--PNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCK 314
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE---NGILP- 204
+ E M +P I L DA A+E NY+ E GI P
Sbjct: 315 EHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGR---AVEAANYLDEMVLAGIEPN 371
Query: 205 -----LEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY--NESR 256
L A N +L L + G L + + R I T L ++F N +
Sbjct: 372 RVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNNIEK 431
Query: 257 SMRDRFDSLERR 268
+ R D L R
Sbjct: 432 AARVVLDMLSER 443
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Query: 42 GKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+++AL+ R + K + C ++ +D L + + ++ MVG + P
Sbjct: 179 AAHIEDALRLFRNIPKPDVCS-----YNTIIDGLCRRGRLAEALDMFSEMVG--KCIAPT 231
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ Y V+ L D+ + F +M G P+ +TY+ + + L K +
Sbjct: 232 VVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLD 291
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
MIK + P + ++ I L A+EI + + G P L+VGL + G
Sbjct: 292 RMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAG 351
Query: 221 RLSDVRRFAEEML 233
R + + +EM+
Sbjct: 352 RAVEAANYLDEMV 364
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 9/210 (4%)
Query: 48 ALKFLRVMKGENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
AL R + P + + ++ L LV + L M GF P YN
Sbjct: 112 ALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGF--APTAATYNV 169
Query: 107 VVGLLCNNN--DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
++ C++ +++ R F + PD +YN I + L + ++ E + F EM+
Sbjct: 170 LLKAHCSDAAAHIEDALRLFRNI----PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVG 225
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
PT + T I L + A++I++ + G+ P + + L+ GL GR +
Sbjct: 226 KCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATS 285
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+ M+ + L +T + E
Sbjct: 286 ALELLDRMIKEKKLPNMITYSSVIDGLCKE 315
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAXSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKEXKMDDANELFDEMLVKG--LVPNXVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 270 YKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A E ++E I + + L+ GL GR D + ML+
Sbjct: 330 EGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLS 380
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L EM
Sbjct: 298 LKQANDLIXEM 308
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 201 SAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 260
Query: 220 GRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 261 GRVDLAMEIYKQMLSQSLL 279
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE ++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 136 KERDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 193
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLALEI 251
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + I
Sbjct: 252 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCK 311
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 312 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E+ +P +L FF+ + K D ++D + G L P++
Sbjct: 102 LKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWG--LRPSV 159
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M G PD TY+++ L K K+ + F E
Sbjct: 160 VSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 219
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 220 MLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 279
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 280 LKQAHDLIDEM 290
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 157 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 214
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGL 274
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 275 CKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDD 334
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 335 VAYTALISGLCQEGRSV 351
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +AN+ F EM+ + P V + T + + +VD AL+ + M ++
Sbjct: 203 GLCKESKMDDANELFDEMLVK-GLVPNGV-TFTTLIDGHCKNGRVDLALEIYKQMLSQSL 260
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K D L D M G L P+ I Y A++ C D+D
Sbjct: 261 LPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG--LKPDKITYTALIDGCCKEGDLDTA 318
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F +M+ D + Y + L + + + E EM+ +P
Sbjct: 319 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 367
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + F +M +RF P+ + L + + D+ +F + M G PT+
Sbjct: 206 GMLEEAIQCFSKM-KRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 263
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D + K D L++ M G L+P+ + YN+++ +D+ FF+
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRG--LVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M PD +TYN + C K K+ F+ EM N +P ++ +T +
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ AI+ + + G++P E + L+ +G LSD R EML
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
++ LI ++EA++ MK FP + + L KL + + + M+
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G P + YN ++ +C DV+ F++M F G PD++TYN + + K +
Sbjct: 255 GAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + FF EM +P + I + +E + + NG+ P S +
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ G + +F +M RR+
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDM--RRV 396
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG+V A F EM +F + Y + + + ++D+ + F MK C P
Sbjct: 274 KEGDVEAARGLFEEM--KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K ++ + M G G L PN++ Y+ +V C + +F
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNG--LKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M G P+ TY + + K + + +EM++ + + I L D
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ + A E++ + G++P AS N L+ G + E+ R I
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%)
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ + +A +L ++ S ++D++ +P +++A+ +L + ++ + F
Sbjct: 156 RMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCF 215
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M FP + + N + K K +V+ FF +MI +PT I +
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 275
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A ++ + G++P + N ++ G +GRL D F EEM
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V++Y T + + + +A+KF M+ P +++ +D K+ + + +L
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ +G N++ Y A++ LC+ + F +M G P+ +YN + +
Sbjct: 426 NEMLQVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K K + +E+ +P L T I L ++ E A + N + E GI
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 1/212 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
L Y T + + E L L MK + T+ F +D L K + V ++
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN- 601
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
+ F L N ++ A++ LC +N V+ F+QMV G PD Y + + K
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
V E +M + + L + + L ++ + A ++ GI P E
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 721
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+L LG + + ++ ++L D
Sbjct: 722 ISVLKKHYELGCIDEAVELQSYLMKHQLLTSD 753
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 4 KEGNVVEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
K GN+ +A + EM++ EWN V+ Y + L +++ EA + M P
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWN---VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
L ++ + VK + ++L + + G G + P+L++Y + LC+ ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRG--IKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
++M G +SL Y + + K+ E + EM + + + T + I L
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 183 DADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
A++ +N I + G+ A ++ GL ++ E+M+ + ++
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+ E P + + + TF+ L +VD A+K M CFP ++ LD L+K
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
L M G L NL+ YN ++ C + +MV G PD++T N
Sbjct: 508 GEAFGLVKDMEHRGIEL--NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVN 565
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
++ + K KV+ + +W P + + I+ + E AI +L
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSE 625
Query: 201 GILPLEASANVLLVGL-RNLGRLSDVRRF-AEEMLNRRILIYDVTMQ 245
GI P A+ NVL+ L N+G V+ A ++ + ++ +T +
Sbjct: 626 GISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQPKFVVLIITKE 672
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 39/278 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE EA + EM+ + +P +V++Y T + L V+ +L L M C
Sbjct: 255 GVCKEYTFEEAFQLLDEMMNK-GIDP-NVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L F++ + S + WD M+ G ++PN++ YNA++ LC+ + +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG--VVPNVVAYNALMHGLCSKRSLGDA 370
Query: 121 FRFFDQM-----------------------------------VFHGAFPDSLTYNMIFEC 145
F+QM + HG P+ + Y + +
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +N ++ M P + T I L + ++AI++++ + +G P
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ N LL L R + ++M +R I + VT
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVT 528
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 39/230 (16%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+AY + L + + +A+ M+ C P ++ +S +D K D ++W+
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 89 IMVGIGF---------------------------------NLMPNLIMYNAVVGLLCNNN 115
M+ G N PN + +N + LC +
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
VD + FDQM G FP++ TYN + + L+K+++ E +M E + LN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM---EHRGIELNLV 527
Query: 176 TAITMLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
T T++ A A+E+ ++ G P + N+++ G++
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 7/204 (3%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y L L + +VD A K L M + C P ++ + L KL +L
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-- 238
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ P++ +YNA++ +C + F+ D+M+ G P+ ++Y I L
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V +M P + I A++ W+ ++ G++P +
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ GL + L D +M
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQM 377
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 97/268 (36%), Gaps = 37/268 (13%)
Query: 27 EHVLAYETFLITLI----RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
E + E I++I R ++ALK M+ PT+K +++ LD L+ N
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
++ M G PN+ YN ++ LC NN VD + +M G PD ++Y +
Sbjct: 165 INPIYSNMKKDGME--PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 143 FECLIKNKKVHEVE------------------------------NFFHEMIKNEWQPTPL 172
L K KV E EM+ P +
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ T I L DA E ++ + + G P + L+ G G + F + M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 233 LNRRILIYDVTMQKLKKAFYNESRSMRD 260
+ ++ V L ++ RS+ D
Sbjct: 343 IREGVVPNVVAYNALMHGLCSK-RSLGD 369
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 10/218 (4%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+ F+ P L Y+ + L +++D L+ MK E + F + + +
Sbjct: 70 KSFKHTP---LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGS 126
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
S ++ + M F + P + +YN ++ L + N + + M G P+ TY
Sbjct: 127 SEQALKTFYRMQD--FRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N++ + L KN +V EM P ++ T I+ L + + A E L
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE-----LA 239
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
P N L+ G+ + + +EM+N+ I
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 1/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L +++EA+ + M+G C P ++ + + + ++
Sbjct: 152 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 211
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M G N PNL+ +N++V LC ++ + FD+MV G PD ++YN + K
Sbjct: 212 LMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+HE F EM + P + + I A E A+ + + E G+ E +
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G L D EEM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEM 354
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ +A +M ER E + + + + +D+AL + M+ P+
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ KL +L M + P+++ Y+ ++ C ++D+ F+
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAK--RVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ G PD++TY+ + L + K++++ F M++ QP T I
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
E A+ + + ++ G+LP + +VL+ GL R + R
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YNAV+ L ++ + + RF M+ HG P+ TYN++ L ++ E
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG-ILPLEASANVLLVGLR 217
+M P + T + A E + A + + + E G P + N ++ GL
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDV 242
GR+ R+ +EM+ R L DV
Sbjct: 235 KAGRMEGARKVFDEMV-REGLAPDV 258
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EM E P+ V+ Y T + + +D A + + M +
Sbjct: 372 GYCKLGRMDLARELIREM-EAKRVKPD-VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P +S+ + L +LND+ +L++ M+ +G + P+ Y ++ C +V
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDA---CELFENMLQLG--VQPDEFTYTTLIDGHCKEGNV 484
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ D+M+ G PD +TY+++ L K+ + E ++ + P P N
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED--PVPDN 538
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 17 EMVERFEWNPE--HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
EM E E N AY T ++ + DEA L + + P++ ++ L L
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K+ +++++ M + PNL YN ++ +LC +D F D M G FP
Sbjct: 354 RKMGKVDEALKVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ T N++ + L K++K+ E F EM P + + I L + A +++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+L++ L+ N GR D + ++M+N+
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 12/258 (4%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+R + + V+AY L L + +VDEALK MK ++ P L ++ +D+L +
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGK 392
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+L D M G L PN+ N +V LC + +D F++M + PD +T+
Sbjct: 393 LDTAFELRDSMQKAG--LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
+ + L K +V + + +M+ ++ + + + I + E +I+ ++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA-FYNE 254
P N + + G R EE+ RR + Y + + L KA F NE
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 255 S----RSMRDRFDSLERR 268
+ SM+++ L+ R
Sbjct: 571 TYELFYSMKEQGCVLDTR 588
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM + + P V+ Y + + L + ++DEA K +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTK-GFEPT-VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + ++ G L PNL +N+++ L +++
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG--LTPNLYTWNSLLDALVKAEEINEA 711
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P+ +TY ++ L K +K ++ F+ EM K +P+ ++ T I+
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A A +++ NG +P A N ++ GL N R D EE R + I+
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 241 DVT 243
+ T
Sbjct: 832 NKT 834
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 40/291 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG V A EM + + + VL Y + + + +VD A KF ++
Sbjct: 212 GFAKEGRVDSALSLLDEM-KSSSLDADIVL-YNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + +L K N V++++ + +P YN ++ + D
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLE--KNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G+ P + YN I CL K KV E F EM K + P I M
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDM 386
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANV----------------------------- 211
L A + + A E+ + + + G+ P + N+
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 212 ------LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL +GR+ D + E+ML+ + L K F+N R
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
++ ++ ++ E +++M+ P ++ + +N S + L+ M +G+
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
P + ++ ++ VD+ D+M D + YN+ + K KV
Sbjct: 200 E--PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
FFHE+ N +P + + I +L A+ + A+E++ ++ +N +P + N +++G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 216 LRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
+ G+ + E + ++ Y+ + L+K
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A K + +M++ + + Y + + + ++ K + M +NC
Sbjct: 456 GLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L+ + +D + K + +++ + F +P+ Y+ ++ L +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF--VPDARSYSILIHGLIKAGFANET 571
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M G D+ YN++ + K KV++ EM ++PT + + I
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ I + L+ G +GR+ + EE++ +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + +++DEA M + C P F + +D L K+ ++++ M + +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM--LDSDCR 479
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
N I+Y +++ N+ ++ + + M+ PD N +C+ K + +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F E+ + P + + I L+ A E++ + E G + + N+++ G
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 219 LGRLSDVRRFAEEM 232
G+++ + EEM
Sbjct: 600 CGKVNKAYQLLEEM 613
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + R + L L M+ + PTL + + ++ L K D L+
Sbjct: 448 HVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLF 507
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G L PN+ +YN+V+ LC QM G PD +T+N + L
Sbjct: 508 LEMRKRG--LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 565
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + E+F E I+ E P L+ I E A ++ ++ G P
Sbjct: 566 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 625
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKK 249
+ L+ GL G++S+ E+M R++ IY+V + L K
Sbjct: 626 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 671
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 57/144 (39%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +P+++ YN ++ C D+ +M G P +TY + CL K +
Sbjct: 442 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 501
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + F EM K P + I L A+ I + +G P + N L+
Sbjct: 502 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLI 561
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
GL + G + F E + R +
Sbjct: 562 TGLCHEGHVRKAEHFLREAIRREL 585
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ GEM E + P ++ Y + + L + +++ M+
Sbjct: 458 GYCRRGDMGRGLLLLGEM-EAKGFLPT-LVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 515
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +++ +D L K +T + + M G + P++I +N ++ LC+ V
Sbjct: 516 SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD--PDIITFNTLITGLCHEGHVRKA 573
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + + P+ L+Y + ++ + EM+ P + I
Sbjct: 574 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 633
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ A + A+ + + E + P NVL+ GL L + EEML + +
Sbjct: 634 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 690
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 18/198 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV E FL IR + L + ++ G F A D+L+++ HT
Sbjct: 569 HVRKAEHFLREAIRRELNPNQLSYTPLIHG---FCMRGELMAASDLLMEMMGRGHT---- 621
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P+++ + A++ L V ++M FPD YN++ L
Sbjct: 622 -----------PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 670
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + +N EM++ QP AT I + ++ A +I+ ++ G+ P
Sbjct: 671 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 730
Query: 208 SANVLLVGLRNLGRLSDV 225
S N ++ G G +S+
Sbjct: 731 SCNAMIKGYCQFGMMSEA 748
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG EA+ EM E+ P+ Y + + + +A+K VM G+ T+
Sbjct: 267 EGRAAEAHALVEEMGEK-GLAPD-AFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+++ + L T +L++ V G P+L MYNA++ C D+D F
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIR--PDLFMYNALINSHCTGGDMDRAFEIM 382
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M PD +TYN + L ++ E EM K QP ++ T I+
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMK 442
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
+ + A+++ + ++ G P + N ++ GL G+ D +EM+ I D T
Sbjct: 443 GDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502
Query: 245 QKLKKAFYNE 254
L + E
Sbjct: 503 ISLIEGLTTE 512
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 3/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW K G V +A K F EM+ + P V+ Y + ++ AL++ M
Sbjct: 192 GWCKVGKVEDATKVFDEMLTEGKVEPNAVM-YNALIGGYCDQGNLEVALRYRGEMVDRGV 250
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T+ ++ + L + L + M G L P+ YN ++ C
Sbjct: 251 SMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG--LAPDAFTYNILINGYCKEGKEKKA 308
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F+ MV G +TY + L V E + F++ ++ +P I
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS 368
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ + A EI + + I P + + N L+ GL LGRL + R EEM R I
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGI 425
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 2/211 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF-FSNALDILVKLNDSTHTVQL 86
+ + Y T + +V ++ +R M+ K+ ++ + K+ ++
Sbjct: 146 NAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKV 205
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G + PN +MYNA++G C+ +++ R+ +MV G TYN+ L
Sbjct: 206 FDEMLTEG-KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ E EM + P I + + A++++ ++ GI
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L+ L G + + R + + R I
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 4/239 (1%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
EG + +A+ EM E+ P+ V + + R A L M G+ PTL
Sbjct: 369 EGRMGDADNMIKEMREK-GMMPDAV-THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+++ + +L K N L+ + G L+P++I++NA++ C N ++D F+
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEG--LLPDIIVFNALIDGHCANGNIDRAFQLL 484
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M PD +TYN + + + KV E EM + +P ++ T I+
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A + + ++ G P + N L+ GL +EM+++ I D T
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDST 603
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 43/303 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLIT-LIRGKQVDEALKFLRVMKGENCFP 62
KEG + +A + G M E P +V+ Y T + +RGK A + MK + P
Sbjct: 228 KEGKLKKAKEFIGHM-ETLGVKP-NVVTYNTIIHGHCLRGK-FQRARVIFQTMKDKGLEP 284
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+++ + L K L M+ G L+PN + YNA++ CN D+D +
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGLICKMLEGG--LVPNAVTYNALIDGYCNKGDLDKAYA 342
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN------------------------- 157
+ D+M+ G +TYN+ L ++ + +N
Sbjct: 343 YRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYC 402
Query: 158 ----------FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
EM+ QPT + + I +L + + A +++ I + G+LP
Sbjct: 403 RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII 462
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
N L+ G G + + +EM N ++L ++T L + + E + R D +
Sbjct: 463 VFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM 522
Query: 266 ERR 268
+RR
Sbjct: 523 KRR 525
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 2/214 (0%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K+ +EAL+ ++K + P ++ + L + +KLN + L+ M + N+ +L
Sbjct: 160 KKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM--NIRSSLY 217
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ +LC + F M G P+ +TYN I K F M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+P + I+ L E A + +LE G++P + N L+ G N G L
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ +EM+++ I+ VT A + E R
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGR 371
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + EA + EM E + + V AY + + ++D+A + M+
Sbjct: 297 GYCKDGRMEEAERVVKEMKETGDIVVDEV-AYGMMINGYCQRGRMDDATRVRNEMRDAGI 355
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L ++ ++ L KL ++ M +G + P+ YN ++ C +
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG--MRPDKYSYNTLIDGYCREGSMRKA 413
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F MV +G +LTYN + + + + + M+K P ++C+T +
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L A + E A+ +W L G+ + N ++ GL +GR+++ AEE+L+R
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE----AEELLDR 524
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 23 EWNPEHV-LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
+ NP + + + L + ++ +A ++ + P +S+ +
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
L D+M+ G L PN+I YN+++ LC + + F+++ G P+ +TYN
Sbjct: 753 EAFSLRDVMLSAG--LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + K K E +M++ + E AI++ + ++EN
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKMVEEGYM-------------------EEAIKLLDQMIENN 851
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ P + L+ G G + ++ + +EM R +L
Sbjct: 852 VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 888
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ +A + MV L Y T L +D+AL+ +M
Sbjct: 403 GYCREGSMRKAFEMCRMMVR--NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P S LD L K + + LW + G L N+I +N V+ LC +
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARG--LAKNVITFNTVINGLCKIGRMAEA 518
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M PDSLTY +F+ K ++ + ++M + P+ + IT
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +I + + G+ P + L+ G G L + EM+N +
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Query: 241 DVTMQKLKKAFYNESR 256
L FY E +
Sbjct: 639 VFICSALMSCFYKEGK 654
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 103/281 (36%), Gaps = 65/281 (23%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V+ + T + L + ++ EA + L MK C P + D KL L
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556
Query: 87 WDIMVGIGF---------------------------------NLMPNLIMYNAVVGLLCN 113
+ M +GF L PNL+ Y A++ C
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
++ + +MV +G P+ + + C K KV E +++ + P
Sbjct: 617 EGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP---G 673
Query: 174 CATA------ITMLLD--AD-EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
C+ + I+ ++D AD P A +W NV++ GL GR++D
Sbjct: 674 CSISTIEIDKISHVVDTIADGNPHSANVMW---------------NVIIFGLCKSGRIAD 718
Query: 225 VRRFAEEMLNRRILIYDVTMQKL-----KKAFYNESRSMRD 260
+ E + N+R L + T L +E+ S+RD
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 13/233 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KEGN+ EA + EMV NP +V + + +VDEA L+ + +
Sbjct: 613 GWCKEGNLHEACNLYFEMVNN-GMNP-NVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D + + D+ I G N +M+N ++ LC + + +
Sbjct: 671 IPGCSISTIEIDKISHVVDT--------IADG---NPHSANVMWNVIIFGLCKSGRIADA 719
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ + PD+ TY+ + + + E + M+ P + + I
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + + A+ ++N + GI P + N L+ G+ ++ + ++M+
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 47/275 (17%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++++ L Q+ AL M C P+L+ + L+ LV+ D ++
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207
Query: 89 IM--VGI-------------------------------GFNLMPNLIMYNAVVGLLCNNN 115
M G+ G L NL+ Y+AV+ C
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK-NEWQPTPLNC 174
++ R + + G P+ +TY ++ + K+ ++ E E EM + + +
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
I + A + N + + GI N ++ GL LGR+ +V++ +EM
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-- 385
Query: 235 RRILIYDVTMQKLKKAF------YNESRSMRDRFD 263
DV M+ K ++ Y SMR F+
Sbjct: 386 -----EDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EM E P +V+ Y + ++ K+V A + M E C P
Sbjct: 530 KAGLIEQARKWFNEMRE-VGCTP-NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ +S +D K Q+++ M G + F PN++ Y A++
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C ++ V+ + D M G P+ + Y+ + + L K K+ E + EM ++ +
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T ++ I + A ++ + +LEN P ++ GL +G+ + +
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 230 EEM 232
+ M
Sbjct: 768 QMM 770
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T L + KQ+ + L +M E C+P+ K F++ + D ++ +L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND------VDNVFRFFDQMVFHGAFPDSLTYNM 141
MV G MP ++YN ++G +C + D +D + + +M+ G + + +
Sbjct: 396 KKMVKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + + EMI + P + + L +A + E A ++ + G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ + +++ G + R++ EM
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + EM E P + Y + + + K+ D A K L M +C
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEH--GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G PN++ Y A++ ++
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYTAMIDGFGMIGKIETC 798
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
++M G P+ +TY ++ + KN + N EM + W PT
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW-PT 847
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+G GF +P+ Y+ V+ LCN + ++ F F++M G D TY ++ + K
Sbjct: 474 MIGQGF--IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F+EM + P + I L A + +A E++ +L G LP +
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ L+ G G++ + E M +
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+VE + P+ V Y + L +EA+ FL M+ +C P + +S L +
Sbjct: 292 LVETENFVPDTVF-YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ ++M+ G P+ ++N++V C + D ++ +MV G P +
Sbjct: 351 KQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 138 TYNMIFECLIKNKK------VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + +K + E + EM+ +N ++ L A + E A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++ G +P ++ + +L L N ++ EEM R L+ DV
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADV 518
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG--KQVDEALKFLRVMKGENCF 61
K G + A+ EM ++ W P H Y +I G K+ E+L L + ++
Sbjct: 826 KNGALDVAHNLLEEM-KQTHW-PTHTAGYRK----VIEGFNKEFIESLGLLDEIGQDDTA 879
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P L + +D L+K ++L + + L+ YN+++ LC N V+ F
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ F +M G P+ ++ + + L +N K+ E
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L++ K +DEA+ + E PT + LD L+K + L+D
Sbjct: 140 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 199
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G PN +YN ++ D + V F+ MV G PD +Y ++ + L +
Sbjct: 200 MLECGCE--PNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 257
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
++++ ++F ++ +P + I L + E A+ ++N + + GI P +
Sbjct: 258 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 317
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNR 235
N L++ L G+ ++ + EE+L +
Sbjct: 318 NSLILYLGKAGKAAEAGKMYEELLAK 343
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
M E F P Y L L++ +++A M C P ++ L+
Sbjct: 166 MSEGFSPTP---CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIA 222
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
D+ +L++ MV G N P++ Y V+ LC + +++ +F Q+ G PD +
Sbjct: 223 GDTEKVCELFESMVEQGMN--PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 280
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TYN++ L K+ ++ E + +++M K P + I L A + A +++ +
Sbjct: 281 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 340
Query: 198 LENGILPLEASANVLLVG 215
L G P + N L+ G
Sbjct: 341 LAKGWKPNVFTYNALIRG 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIR-GKQVDEALKFLRVMKGEN 59
G K+GN+ +A F EM+E E A L+ R ++ + M +
Sbjct: 183 GLLKDGNIEDAEALFDEMLE---CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 239
Query: 60 CFPTLKFFSNALDILV---KLNDS-THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN 115
P +K ++ +D L +LND ++ QL D+ L P+LI YN ++ L +
Sbjct: 240 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM------GLEPDLITYNLLIHGLGKSG 293
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
++ ++ M G P+ TYN + L K K E + E++ W+P
Sbjct: 294 RLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYN 353
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILP 204
I + PE A + ++ G P
Sbjct: 354 ALIRGYSVSGSPENAFAAYGRMIVGGCRP 382
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y+ ++ + + ++++ + ++M G +TYN I L+K+K + E N
Sbjct: 102 PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 161
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++++ + PTP + LL E A +++ +LE G P A N+LL G R
Sbjct: 162 YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 221
Query: 219 LGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
G V E M +N I Y V + L
Sbjct: 222 AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 254
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YNA++ L + + +D F +M G PD TY++I + + K+ ++ ++ EM
Sbjct: 72 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 131
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
++ T + T I+ L+ + + AI ++ ++ G P + LL GL G +
Sbjct: 132 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 191
Query: 224 DVRRFAEEML 233
D +EML
Sbjct: 192 DAEALFDEML 201
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + L + +++EAL M+ + P L +++ + L K + ++++
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 338
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
++ G+ PN+ YNA++ + +N F + +M+ G P+S TY
Sbjct: 339 ELLAKGWK--PNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 387
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + G + A TF EM++ P+ V A T L R ++++ L F ++ +
Sbjct: 180 YGQVGKIKLAEVTFLEMLQA-GCEPDAV-ACGTLLCAYARWGKLNDMLMFYAAVRRRDIV 237
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ + L K + LW+ M+ N+ PN Y V+G ++
Sbjct: 238 PSISVFNFMVSSLQKQKLHGKVIHLWEQMLEA--NVAPNQFTYTVVIGSYAKEGMLEEAM 295
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F +M P+ TY+++ K+ K E + EM P+ CA+ +T+
Sbjct: 296 DAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLY 355
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ A+ +++ + +N I+P E +L+ LG D +R EE+
Sbjct: 356 YKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEI 406
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+YNA+V LC + +R F +++ G D++T +++ L K +K E EN +
Sbjct: 648 VYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTKQEKFQEAENIIYRC 707
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ +E + + T I +L++ + A+ I++ ++ +GI + N+++ G+L
Sbjct: 708 LHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKL 767
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 11/233 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE-- 58
G +EGN N+ +MVE + P +V+ + + + + ++VD+AL+ L M G
Sbjct: 314 GLAREGNFNRMNELMEKMVE-MDIQP-NVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371
Query: 59 ------NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
+ P + ++ +D L K+ + L + M P+ I YN ++ C
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK-GCAPDTITYNCLIDGFC 430
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+++ FD+M G P+ +T N + + + +V NFF E + + +
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
I + + E A+E++N +L++G P L+ G GR++D
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADA 543
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + + + A K +R M PT+ + ++ + ++++
Sbjct: 594 TITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFK 653
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M + PN ++YN ++ LC NN V + + M G P++ TYN IF+ L
Sbjct: 654 DMKAAS-KVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRD 712
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
K + +V F MI++ P
Sbjct: 713 EKDLEKVFEFMDRMIEHACNP 733
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 3/205 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLW 87
V+ Y T + L + + E L + M+ + C P ++ +D K + +L+
Sbjct: 383 VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELF 442
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M G + PN++ N +VG +C V + FF + G D++TY +
Sbjct: 443 DEMNKEG--VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ F+EM+K+ P + T I+ A A + + + GI P
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ G + V +EM
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEM 585
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 35/203 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-----RVM 55
G+ K G + + + F EM + E +V+ T + + R +V A+ F R M
Sbjct: 428 GFCKAGEIEKGKELFDEMNK--EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGM 485
Query: 56 KGE--------NCFPTLKFFSNALDI---LVKLNDSTHTVQLWDIMVGIG---------- 94
KG+ N F + F A+++ ++K S + + ++ G
Sbjct: 486 KGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASF 545
Query: 95 -------FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ P+ + YN ++G C N VF +M G PD++TYN +
Sbjct: 546 VLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605
Query: 148 KNKKVHEVENFFHEMIKNEWQPT 170
KN + + +MIK PT
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPT 628
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNAL-DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+EA++ + MK + P N L + L K N V L + M G + PN Y
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG--VTPNTTTY 703
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
NA+ L + D++ VF F D+M+ H PD +T ++ E L ++ ++ F
Sbjct: 704 NAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKF 757
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S ++ L K + +L+D M+ G L+PN + + ++ C VD
Sbjct: 212 XYTYSVLINGLCKESKMDDANELFDEMLVKG--LVPNGVTFTTLIDGHCKKGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ PD +TYN + L K + + + EM+ +P + T I
Sbjct: 270 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEML 233
L +EM+
Sbjct: 298 LKQANDLIDEMV 309
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P+ Y+ ++ LC + +D+
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG--VQPDXYTYSVLINGLCKESKMDDAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + K +V + M+ P + T I L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + ++ G+ P + + L+ G G L + M+ I + D
Sbjct: 293 CKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 200 KSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ + ML++ +L
Sbjct: 260 KGRVDLAMEIYKRMLSQSLL 279
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + L L G Q +A+ + +MKG N + + LVK+ ++L++
Sbjct: 116 LVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFN 175
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M P+++ Y +++ C V+N FD MV G P+ + YN +
Sbjct: 176 SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYAS 235
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
E F+ + KN +P ++ + + + +PE A E++N + +N P + S
Sbjct: 236 RGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVS 295
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ + G L + EM
Sbjct: 296 YNALIDAYGSAGMLKEAVGLLHEM 319
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 37/269 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA + F M ER P V+ Y + + + QV+ +M E P
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPN 222
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ L + +++++ G L P+++ Y +++ + +
Sbjct: 223 IVAYNSLLGAYASRGMHREALAIFNLIKKNG--LRPDIVSYTSLLNAYGRSAQPEKAREV 280
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT------- 176
F++M + P+ ++YN + + + E HEM K+ QP ++ +T
Sbjct: 281 FNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Query: 177 ----------------------------AITMLLDADEPEFAIEIWNYILENGILPLEAS 208
I L + E A+E++ + E+ + P +
Sbjct: 341 CRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVT 400
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N+L+ G LG+ ++ RF E+M++ ++
Sbjct: 401 YNILISGSSKLGKYTESLRFFEDMVDSKV 429
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGE--NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN 96
L++ Q EA++ M+ C P + +++ + + ++D+MV G
Sbjct: 161 LVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG-- 218
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PN++ YN+++G + F+ + +G PD ++Y + ++ + +
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F++M KN +P ++ I A + A+ + + + ++GI P S + LL
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+++ + E +R I + V K++
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 12/224 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + V +A F EM E + P+ + Y + + R Q A+ + M
Sbjct: 21 YARHNQVDQARGLFFEMQE-WRCKPDADI-YNSLIHAHSRAGQWRWAINIMEDMLRAAIP 78
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT ++N ++ + ++L M G+G P+L+ +N V+ L N
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVG----PDLVTHNIVLSALKNGAQYSK 134
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+F+ M D+ T N+I CL+K + E F+ M + P + T +
Sbjct: 135 AISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTS 193
Query: 180 MLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
++ + E I++ ++ G+ P + N LL + G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+Y ++ L +N VD F +M PD+ YN + + + N +M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ PT I A + A+E+ + ENG+ P + N++L L+N +
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 223 SDVRRFAEEM 232
S + E M
Sbjct: 133 SKAISYFEIM 142
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 2/222 (0%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
FL L + + D + F R M G PT+ ++ + + K D L++ M +
Sbjct: 102 AFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKM 161
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G L P+++ YN ++ +D F++M F G PD +TYN + K K +
Sbjct: 162 G--LTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML 219
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
FF EM + +P ++ +T I L + AI+ + + G+LP E + + L+
Sbjct: 220 RAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G L + A+EML + + VT L E
Sbjct: 280 DANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEG 321
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F EM E+ + P+ +L + T + L +++E + MK ++
Sbjct: 360 KAMELFNEMREK-DIKPD-ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D K + T + L + M +G + ++ + A++ LC V +F +M
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEV--TVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
H P+ Y + + L KN + + + F EM P + I L +
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535
Query: 190 AIEIWNYILENGILPLEASANVLLV-GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ + N ++E GI L+ A LV GL G++ R+F EM+ + I+ + +L
Sbjct: 536 ALNMRNKMMEMGI-ELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLL 594
Query: 249 KAFY 252
+ Y
Sbjct: 595 RKHY 598
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 6/239 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G E + E EM E NP + Y T + + EA+ L M+
Sbjct: 386 GLCSESKLEECKIIMTEMKESGIGANP---VIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
T+ F +D L K + + M +L PN+ +Y A++ LC NN + +
Sbjct: 443 TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD--HDLQPNVAVYTALIDGLCKNNCIGD 500
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ FD+M PD + Y + + +K+ E N ++M++ + + +
Sbjct: 501 AKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVW 560
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + + A + ++ GI+P E LL LG + + E++ + ++
Sbjct: 561 GLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG+++ A F E +++ P+ ++ Y T + + +DE++ MK C P
Sbjct: 144 KEGDMLTARSLF-EQMKKMGLTPD-IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPD 201
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K + + M +L PN+I Y+ ++ LC + +F
Sbjct: 202 VITYNALINSFCKFKGMLRAFEFFREMKDK--DLKPNVISYSTLIDALCKEGMMQMAIKF 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F M G P+ TY+ + + K + E EM++ + LN T T+L
Sbjct: 260 FVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ---EHVDLNIVTYTTLL 314
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 2/175 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V++Y T + L + + A+KF M P +S+ +D K + L
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLA 295
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ +L N++ Y ++ LC ++ F M G P+ Y + I
Sbjct: 296 DEMLQEHVDL--NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI 353
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
K + + + F+EM + + +P L T + L + E I + E+GI
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG EA + + EM+ R + + Y + + + ++D A +M + C P
Sbjct: 335 KEGKFFEAAELYDEMLPR--GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F+ +D ++L M G L+ N + YN ++ C D++
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRG--LVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM+ G PD +T N + + L N K+ + F M K++ M LD
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK-------------MDLD 497
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A P NG+ P + N+L+ GL N G+ + EEM +R I+ +T
Sbjct: 498 ASHPF-----------NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 244 MQKLKKAFYNESR 256
+ +SR
Sbjct: 547 YSSMIDGLCKQSR 559
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG VVEA MVE P+ + Y TF+ + + AL LR M+ +
Sbjct: 191 GLCREGRVVEAVALLDRMVEN-GLQPDQI-TYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + + L+ M G + PN++ YN ++G C +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG--IFPNIVTYNCMIGGFCISGRWSA 306
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M+ P+ +TYN + +K K E + EM+ P + + I
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
D + A +++ + G P + L+ G R+ D EM R ++
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 240 YDVTMQKLKKAF 251
VT L F
Sbjct: 427 NTVTYNTLIHGF 438
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 16/255 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + A F M + +P+ V + T + K++D+ ++ L M
Sbjct: 367 GFCKQDRLDAAEDMFYLMATK-GCSPD-VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ + + D + L M+ G + P+++ N ++ LC+N + +
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG--VCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 121 FRFFDQM-----------VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M F+G PD LTYN++ LI K E E + EM P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ ++ I L + A +++ + P + N L+ G GR+ D
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 230 EEMLNRRILIYDVTM 244
EM RR ++ D +
Sbjct: 603 CEM-GRRGIVADAII 616
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 95/248 (38%), Gaps = 46/248 (18%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG++ + +P+ V+ + T L L +V EAL + C P + F+
Sbjct: 135 ALSTFGKLT-KLGLHPD-VVTFTTLLHGLCLDHRVSEALDLFH----QICRPDVLTFTTL 188
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--V 128
++ L + V L D MV G L P+ I Y V +C D + +M +
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENG--LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEI 246
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
H P+ + Y+ I + L K+ + + N F EM
Sbjct: 247 SH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM-------------------------- 279
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
+ GI P + N ++ G GR S +R +EML R+I VT L
Sbjct: 280 ---------QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Query: 249 KAFYNESR 256
AF E +
Sbjct: 331 NAFVKEGK 338
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YN ++ L N +++M G PD++TY+ + + L K ++ E
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + P + T I A + +E++ + GI+ L+ G R
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+G ++ +EM++ + +T++ + F+++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
VL Y + LI + EA + M P +S+ +D L K + Q++
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ PN++ +N ++ C VD+ F +M G D++ Y + K
Sbjct: 569 SMGSKSFS--PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + +T +E E A+ +
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/212 (17%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F+ + +V++ + L+ M + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERK--QIRCDIY 117
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+ ++ C+ + + F ++ G PD +T+ + L + +V E + FH++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG-- 220
+ P L T + L A+ + + ++ENG+ P + + + G+ +G
Sbjct: 178 CR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233
Query: 221 --RLSDVRRFAE-EMLNRRILIYDVTMQKLKK 249
L+ +R+ E + ++IY + L K
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
MVE+ + P+ V L L + ++ +A+K + +M G P ++ + L +
Sbjct: 88 MVEKGQ-KPD-VFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRK 145
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ + +QL D M G+ N YN++V LC + ++ + D+++ G P++
Sbjct: 146 GNVGYAMQLVDKMEEYGYP--TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAY 203
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY+ + E K + E E+I +P ++ +T L E A++++ +
Sbjct: 204 TYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFREL 263
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G P S N+LL L N GR + EM
Sbjct: 264 PSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++GNV A + +M E + + P + Y + + L + ++L+ L + + P
Sbjct: 144 RKGNVGYAMQLVDKM-EEYGY-PTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPN 201
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S L+ K + +L D ++ G PNL+ YN ++ LC ++ +
Sbjct: 202 AYTYSFLLEAAYKERGADEASKLLDEIIAKGGK--PNLVSYNVLLTGLCKEGRTEDAMQL 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G P+ ++YN++ L + E EM +E P+ + I L
Sbjct: 260 FRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTL 319
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E A+E+ ++ P +S N ++ L ++ V + ++M+ R
Sbjct: 320 HGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYR 371
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 16/248 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +A + F E+ + ++P +V++Y L +L + +EA L M G+
Sbjct: 246 GLCKEGRTEDAMQLFRELPSK-GFSP-NVVSYNILLRSLCNEGRWEEANVLLAEMDGDER 303
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ + L + H +++ + M+ F P YN ++ LC + VD V
Sbjct: 304 SPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFK--PTASSYNPIIARLCKDRKVDLV 361
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ DQM++ P+ TYN I L + V E + + + T IT
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A ++ + + G P + + L+ GL E MLN I I+
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGL-----------CMEGMLNEAIEIF 469
Query: 241 DVTMQKLK 248
V + +K
Sbjct: 470 SVMEENIK 477
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
E++ + MK P++ F++ L IL+K + ++D M + + P+ +N
Sbjct: 158 QESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT-YGVTPDSYTFN 216
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ C N+ VD F F +M + PD +TYN I + L + KV N + M+K
Sbjct: 217 TLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKK 276
Query: 166 EWQPTPLNCATAITMLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P N + T+L E + A+ +++ +L G+ P + N L+ GL R
Sbjct: 277 ATAVHP-NIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRY 335
Query: 223 SDVRRF 228
+++ F
Sbjct: 336 DEIKGF 341
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G A+ F EM + P+ + T + + VD+A + M+ +C P
Sbjct: 188 KRGRTGMAHDMFDEMRRTYGVTPDSY-TFNTLISGFCKNSMVDQAFTIFKEMELYSCNPD 246
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D L + L + M+ + PN++ Y ++ C ++D
Sbjct: 247 VVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLV 306
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE----WQPTPLNCATAIT 179
F +M+ G P+++TYN + + L + + E++ F +I + + P I
Sbjct: 307 FHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGF---LIGGDAFTTFSPDACTFNILIK 363
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLL--VGLRN 218
DA + A++++ +L + P AS +VL+ + LRN
Sbjct: 364 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRN 404
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 116/302 (38%), Gaps = 53/302 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + + EA F EM+ R P V Y T + L + DE FL G +
Sbjct: 293 GYCMKQEIDEALLVFHEMLTR-GLKPNAV-TYNTLIKGLSEAHRYDEIKGFL---IGGDA 347
Query: 61 FPTLKFFSNALDILVKLN-DSTH---TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
F T + +IL+K + D+ H ++++ M+ + L P+ Y+ ++ LC N+
Sbjct: 348 FTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM--KLHPDSASYSVLIRTLCLRNE 405
Query: 117 VDNVFRFFDQM----VFHG---AFPDSLTYNMIFECLIKNKKVHEVENFFHE-------- 161
D F+++ V G P + YN++FE L N K + E F +
Sbjct: 406 FDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQD 465
Query: 162 --------------------------MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
M++ E+ P P I LL E A +
Sbjct: 466 PSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQ 525
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI-YDVTMQKLKKAFYNE 254
+L + LP+ + + +L L +D ML +RI D++ Q ++ F +
Sbjct: 526 RMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSA 585
Query: 255 SR 256
+
Sbjct: 586 QK 587
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 112/304 (36%), Gaps = 53/304 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G V A+ M+++ ++++Y T L +++DEAL M
Sbjct: 256 GLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGL 315
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF--NLMPNLIMYNAVVGLLCNNNDVD 118
P ++ ++ L+++ ++ ++G P+ +N ++ C+ +D
Sbjct: 316 KPNAVTYNT---LIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLD 372
Query: 119 NVFRFFDQMVFHGAFPDSLTY--------------------------------------- 139
+ F +M+ PDS +Y
Sbjct: 373 AAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLA 432
Query: 140 ---NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
N++FE L N K + E F +++K Q P + T IT L + + A E+
Sbjct: 433 AAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQD-PSSYRTLITGLCREGKFKAAYELLVL 491
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-----IYDVTMQKLKKAF 251
+L +P + VL+ GL +G + ML L + V + +K+ F
Sbjct: 492 MLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKF 551
Query: 252 YNES 255
N+S
Sbjct: 552 ANDS 555
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 47/303 (15%)
Query: 6 GNVVEANKTFGEMV-ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G + EA F +MV E F+ N V+ Y T + L + +Q+ EAL M + P +
Sbjct: 140 GKIGEALDVFDKMVGEGFQPN---VVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDI 196
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV------- 117
+++ + L L + H L + MV +MPN++ N VV LC V
Sbjct: 197 FTYNSLIHALCNLCEWKHVTTLLNEMVK--SKIMPNVVSLNIVVDALCKEGKVTEAHDVV 254
Query: 118 ----------------------------DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
D + FD MV +G + ++YN + K
Sbjct: 255 DMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKI 314
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+++ + F EM + E P + +T I L + AI ++N ++ G +P +
Sbjct: 315 QRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTY 374
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
++LL L RL++ + + L+ + +Y++ + + +A + + RD F +L
Sbjct: 375 SILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA--GDLEAARDLFSNL 432
Query: 266 ERR 268
R
Sbjct: 433 APR 435
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 38 TLIRG----KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
TL+RG ++ EAL M GE P + + ++ L K T + L+ M+
Sbjct: 131 TLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK 190
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + P++ YN+++ LCN + +V ++MV P+ ++ N++ + L K KV
Sbjct: 191 GIS--PDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 248
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E + MI+ +P + A + E + A+++++ ++ NG + S N L+
Sbjct: 249 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 308
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
G + R+ EEM + ++ +T L + R
Sbjct: 309 NGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR 351
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G + +A F EMV + +++ Y L L + ++ EA+ L+ ++G N
Sbjct: 345 GLCHVGRLQDAIALFNEMVACGQI--PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL 402
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ A+D + + D L+ + G L P++ +N ++ LC +D
Sbjct: 403 DPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG--LQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M +G + TYN I + L++N K EM+ + A + M
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520
Query: 181 LLD 183
L D
Sbjct: 521 LSD 523
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + L ++ + K L + M P + + ++ LN +
Sbjct: 53 PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALS 112
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ ++ +G P+ + +V LC + FD+MV G P+ +TY +
Sbjct: 113 VLAKILKLGHQ--PDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNG 170
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K++++ E N F EMI P + I L + E + + N ++++ I+P
Sbjct: 171 LCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN 230
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
S N+++ L G++++ + M+
Sbjct: 231 VVSLNIVVDALCKEGKVTEAHDVVDMMI 258
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 5/214 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + +A F EM R E P + + Y T + L ++ +A+ M
Sbjct: 310 GYCKIQRIDKAMYLFEEMC-RQELIP-NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S LD L K + + L + G NL P++ +YN + +C D++
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEG--SNLDPDVQVYNIAIDGMCRAGDLEAA 425
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD T+N++ L K + E F EM +N T
Sbjct: 426 RDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQG 485
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
LL ++ AI++ +L G + S LLV
Sbjct: 486 LLQNNKTSRAIQLLEEMLARG-FSADVSTTALLV 518
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 39/267 (14%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA+ M++ P+ V+ Y + ++DEA+K +M C
Sbjct: 243 KEGKVTEAHDVVDMMIQG-GVEPD-VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCN 300
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ K+ + L++ M L+PN + Y+ ++ LC+ + +
Sbjct: 301 VVSYNTLINGYCKIQRIDKAMYLFEEMCR--QELIPNTMTYSTLIHGLCHVGRLQDAIAL 358
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F++MV G P+ +TY+++ + L KN ++ E + + P AI +
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCR 418
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF--------------- 228
A + E A ++++ + G+ P + N+++ GL G L + +
Sbjct: 419 AGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCT 478
Query: 229 --------------------AEEMLNR 235
EEML R
Sbjct: 479 YNTITQGLLQNNKTSRAIQLLEEMLAR 505
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 2/212 (0%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+D+AL M + P + F+ L + K+ + + L M F + P++
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM--DSFGIPPDVYTL 94
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
V+ C+ N VD +++ G PD+ T+ + L K+ E + F +M+
Sbjct: 95 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+QP + T + L + A+ +++ ++ GI P + N L+ L NL
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
V EM+ +I+ V++ + A E +
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L + + LK R M P + +S+ ++ L ++ V L+D M
Sbjct: 81 TYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEM 140
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
V G N+I YN+++ C R F QMV G PD +T+ + + L K
Sbjct: 141 VSQGIK--ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKG 198
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
KV E F MIK P + + + L + + A+ ++ ++E GI S N
Sbjct: 199 KVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYN 258
Query: 211 VLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKAFYNES--RSMRDRFDS 264
L+ G G+ + R+ E L I Y + L KA Y R+ ++ F++
Sbjct: 259 TLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI----LLKALYQNGRIRTAKELFNN 314
Query: 265 LE 266
++
Sbjct: 315 MQ 316
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 35/256 (13%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA +TF +MV E V+ + T + L + +V EA K +M + P + +++
Sbjct: 167 EATRTFSQMVG--EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFN--------------------------------- 96
L+ L + H V+L+++MV G
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L P++ Y ++ L N + F+ M G P TY ++ + L KN + E
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ F + +++P+ + I + A E A+EI++ I G++P + N+++ GL
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404
Query: 217 RNLGRLSDVRRFAEEM 232
G+L + R +M
Sbjct: 405 CKEGKLLEAERLFVQM 420
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y L L + ++EA+ R +K P+++ +S + + + ++++D +
Sbjct: 326 TYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEI 385
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L+PN++ YN ++ LC + R F QM G D +++N I ++
Sbjct: 386 PTVG--LVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQEN 443
Query: 151 KVHEVENFFHEMIKNEWQP 169
+V + F M + + P
Sbjct: 444 QVQKAMEFLKRMREKNFSP 462
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 5/216 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G EA F +M ++E + Y L L + ++ A + M+
Sbjct: 263 GYCTSGKTEEAMTLFRKM--QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ 320
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+L ++ LD L K + ++ + I + P++ +Y+ ++G + ++
Sbjct: 321 SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK--PSIRIYSILIGGMFQARRWESA 378
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD++ G P+ +TYN++ L K K+ E E F +M ++ + ++ I
Sbjct: 379 MEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRG 438
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L ++ + A+E + E P S ++LV L
Sbjct: 439 FLQENQVQKAMEFLKRMREKNFSP-NDSVTLMLVNL 473
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 56/136 (41%)
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N Y V+ LC + + F +M+ G P+ + Y+ + L + K+ E N F
Sbjct: 78 NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM+ + + + I + A ++ ++ GILP + L+ L
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197
Query: 220 GRLSDVRRFAEEMLNR 235
G++ + + E M+ +
Sbjct: 198 GKVQEAYKIFELMIKQ 213
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 58/152 (38%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PNL+ + +V +C V + FD+M G D L Y + L K ++
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ I L ++++ ++ GI P + L+ GL
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
+G+L + +EM+++ I +T L A
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHA 158
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 2/212 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +Y + L R + +ALK M P ++ +D VK D +
Sbjct: 13 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M+ G PN++ YN ++ LC +D D+M H FPD TY+++F+
Sbjct: 73 LRDQMLHDGPK--PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + + + + F E +K C+ + L + A ++ ++ G++P
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N L+ G + L E+M +R I
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 222
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A EM E+ +P V + T + Q+++ L M+ + + F
Sbjct: 242 VTKAEDLVMEM-EKSGVDPS-VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 299
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + K V + D M I ++ PN +YN+++ + D + F ++M
Sbjct: 300 GSVVKAFCKNGKIPEAVAILDDM--IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G +TYN++ + L ++ ++ E E + + +P ++ T I+ + +
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+E+ + + GI P + + L+ L + GR+ D+ ++ML++ +
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 467
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +M+ ++ + Y + + I ++A + MK +
Sbjct: 308 KNGKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L + + +L + G L P+++ YN ++ CN D D
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQG--LRPDVVSYNTIISACCNKGDTDKALEL 423
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+M +G P TY+ + L +VH++E + +M+ +P+
Sbjct: 424 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 470
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 33/208 (15%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y L L R ++DE + M + FP +S D L + +S + L+
Sbjct: 85 NIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLF 144
Query: 88 ------DIMVG---------------------------IGFNLMPNLIMYNAVVGLLCNN 114
+M+G + L+P ++YN ++ C
Sbjct: 145 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQV 204
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
D+ F F+QM PD +TYN + L K + V + E+ EM K+ P+
Sbjct: 205 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 264
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGI 202
T I A + E + + + + GI
Sbjct: 265 NTLIDAYGTAGQLEKCFTVLSDMQQKGI 292
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+++ + + + ++ EA+ L M ++ P + +++ +D ++ D+ L +
Sbjct: 296 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 355
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + +++ YN ++ LC ++ +D + G PD ++YN I
Sbjct: 356 KMKNSGVS--ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ EM K +PT T ++ L A ++ +L + P +
Sbjct: 414 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+++ S V +EM + I D
Sbjct: 474 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
MVE+ + P+ V L L + ++ +A+K + +M G P ++ + L +
Sbjct: 88 MVEKGQ-KPD-VFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRK 145
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
+ + +QL D M G+ N YN++V LC + ++ + D+++ G P++
Sbjct: 146 GNVGYAMQLVDKMEEYGYP--TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAY 203
Query: 138 TYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI 197
TY+ + E K + E E+I +P ++ +T L E A++++ +
Sbjct: 204 TYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFREL 263
Query: 198 LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
G P S N+LL L N GR + EM
Sbjct: 264 PSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
++GNV A + +M E + + P + Y + + L + ++L+ L + + P
Sbjct: 144 RKGNVGYAMQLVDKM-EEYGY-PTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPN 201
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+S L+ K + +L D ++ G PNL+ YN ++ LC ++ +
Sbjct: 202 AYTYSFLLEAAYKERGADEASKLLDEIIAKGGK--PNLVSYNVLLTGLCKEGRTEDAMQL 259
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F ++ G P+ ++YN++ L + E EM +E P+ + I L
Sbjct: 260 FRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTL 319
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
E A+E+ ++ P +S N ++ L ++ V + ++M+ R
Sbjct: 320 HGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYR 371
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 16/248 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG +A + F E+ + ++P +V++Y L +L + +EA L M G+
Sbjct: 246 GLCKEGRTEDAMQLFRELPSK-GFSP-NVVSYNILLRSLCNEGRWEEANVLLAEMDGDER 303
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ + L + H +++ + M+ F P YN ++ LC + VD V
Sbjct: 304 SPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFK--PTASSYNPIIARLCKDRKVDLV 361
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ DQM++ P+ TYN I L + V E + + + T IT
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A ++ + + G P + + L+ GL E MLN I I+
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGL-----------CMEGMLNEAIEIF 469
Query: 241 DVTMQKLK 248
V + +K
Sbjct: 470 SVMEENIK 477
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EM E P +V+ Y + ++ K+V A + M E C P
Sbjct: 489 KAGLIEQARKWFNEMRE-VGCTP-NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ +S +D K Q+++ M G + F PN++ Y A++
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 606
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C ++ V+ + D M G P+ + Y+ + + L K K+ E + EM ++ +
Sbjct: 607 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 666
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T ++ I + A ++ + +LEN P ++ GL +G+ + +
Sbjct: 667 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 726
Query: 230 EEM 232
+ M
Sbjct: 727 QMM 729
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T L + KQ+ + L +M E C+P+ K F++ + D ++ +L
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND------VDNVFRFFDQMVFHGAFPDSLTYNM 141
MV G MP ++YN ++G +C + D +D + + +M+ G + + +
Sbjct: 355 KKMVKCGH--MPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSS 412
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + + EMI + P + + L +A + E A ++ + G
Sbjct: 413 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 472
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ + +++ G + R++ EM
Sbjct: 473 LVADVYTYTIMVDSFCKAGLIEQARKWFNEM 503
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + EM E P + Y + + + K+ D A K L M +C
Sbjct: 642 GLCKVGKLDEAQEVKTEMSEH--GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 699
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G PN++ Y A++ ++
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYTAMIDGFGMIGKIETC 757
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
++M G P+ +TY ++ + KN + N EM + W PT
Sbjct: 758 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW-PT 806
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+G GF +P+ Y+ V+ LCN + ++ F F++M G D TY ++ + K
Sbjct: 433 MIGQGF--IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F+EM + P + I L A + +A E++ +L G LP +
Sbjct: 491 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 550
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ L+ G G++ + E M +
Sbjct: 551 SALIDGHCKAGQVEKACQIFERMCGSK 577
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+VE + P+ V Y + L +EA+ FL M+ +C P + +S L +
Sbjct: 251 LVETENFVPDTVF-YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 309
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ ++M+ G P+ ++N++V C + D ++ +MV G P +
Sbjct: 310 KQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 367
Query: 138 TYNMIFECLIKNKK------VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + +K + E + EM+ +N ++ L A + E A
Sbjct: 368 VYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++ G +P ++ + +L L N ++ EEM R L+ DV
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADV 477
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG--KQVDEALKFLRVMKGENCF 61
K G + A+ EM ++ W P H Y +I G K+ E+L L + ++
Sbjct: 785 KNGALDVAHNLLEEM-KQTHW-PTHTAGYRK----VIEGFNKEFIESLGLLDEIGQDDTA 838
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P L + +D L+K ++L + + L+ YN+++ LC N V+ F
Sbjct: 839 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 898
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ F +M G P+ ++ + + L +N K+ E
Sbjct: 899 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V +Y T + IR +DE + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPSAV-SYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLSKESKMDDADELFDEMLVKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + +M + +P + T I
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + L+ GL GR D + EML+
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSA 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ +D FR M+ G PD TY+++ L K K+ + + F E
Sbjct: 178 VSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 222 LSDVRRFAEEM 232
L ++M
Sbjct: 298 LKQAHDLIDDM 308
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/261 (16%), Positives = 102/261 (39%), Gaps = 4/261 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A+ F ++E + + + + + +A++ R+ + +
Sbjct: 53 SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRK 112
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
L+ L+KL ++ ++ G+ +L +N ++ C + D+ FD +
Sbjct: 113 VLEYLMKLKYFKLVWGFYEEILECGYP--ASLYFFNILMHRFCKDGDIRVAQSVFDAITK 170
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P +++YN + I+ + E M+ + QP + I L + +
Sbjct: 171 WGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDD 230
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A E+++ +L G++P + L+ G GR+ ++ML++ +L +T L
Sbjct: 231 ADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290
Query: 250 AFYNES--RSMRDRFDSLERR 268
+ + D D + R+
Sbjct: 291 GLCKKGDLKQAHDLIDDMSRK 311
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 120/286 (41%), Gaps = 17/286 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPE---HVLAYETFLITLIRGKQVDEALKFLRVMKG 57
GW + + +A K EM++ + PE ++ A E+F + + E +F+R
Sbjct: 260 GWCRARDPKKAMKVLEEMIQ-MKHTPESFTYIAAIESFCSAGLVS-EARELFEFMRTEGS 317
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
PT K +S + L K + +L M G MP++ Y ++ +C +
Sbjct: 318 TISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCG--CMPDVSTYKELIEGMCLVGKL 375
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
D +R ++M G PD +TYN L +K + MI+ +P+
Sbjct: 376 DAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNML 435
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ M + E A++IW + G + +++ GL + G+ +E++NR +
Sbjct: 436 MVMFFEMGEAHRALDIWLEMDTRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDM 495
Query: 238 LI----YDVTMQKLKK-----AFYNESRSMRDRFD-SLERRWKTSQ 273
+ +D M +L A + S MR ++ ++ RR+ +Q
Sbjct: 496 KLSYKKFDAIMLRLSAVGDLGAIHRLSEHMRRFYNVAMSRRFAITQ 541
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 6/170 (3%)
Query: 68 SNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++AL++L+ V+ + + G + L+ N Y+ + C D + ++
Sbjct: 217 TDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRARDPKKAMKVLEE 276
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW----QPTPLNCATAITMLL 182
M+ P+S TY E V E F E ++ E PT + I L
Sbjct: 277 MIQMKHTPESFTYIAAIESFCSAGLVSEARELF-EFMRTEGSTISSPTAKTYSIMIVALA 335
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
AD E E+ + + G +P ++ L+ G+ +G+L R EEM
Sbjct: 336 KADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEM 385
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 125/339 (36%), Gaps = 77/339 (22%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + A K FGEM + P+ V Y + L R ++D A L ++ PT+
Sbjct: 189 GQLDVARKVFGEMRDGKTVAPD-VHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVV 247
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMV-----------GI--------------------- 93
++ +D L K +L MV GI
Sbjct: 248 TYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM 307
Query: 94 -GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
GF + PN ++YN ++G C + FD+MV G +TYN+I + L K ++
Sbjct: 308 QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEM 367
Query: 153 HEVENFFHEMIKN-------------EW-----------------------QPTPLNCAT 176
E EM+ W +P
Sbjct: 368 EHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA 427
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
I L + + E A EIW +L G+ A++N L+ GL + + + + M+N
Sbjct: 428 CIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSG 487
Query: 237 I----LIYDVTMQKLKKAF-YNESRSMRDRFDSLERRWK 270
+ + Y++ +Q KA +E+ +RD D ++R +K
Sbjct: 488 VELDRITYNIMIQGCCKASKMDEAIQLRD--DMIKRGFK 524
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 5/167 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
KEG + A K EM+ H + + + +RG ++D L+ +R M P
Sbjct: 363 KEGEMEHAEKILDEML--LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKP 420
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ + L K ++W ++G G + N+ NA++ LC N++ +
Sbjct: 421 NDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGV--NVATSNALIHGLCQGNNMKEATK 478
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
MV G D +TYN++ + K K+ E +MIK ++P
Sbjct: 479 VLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP 525
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 68 SNAL-DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
SNAL L + N+ ++ MV G L + I YN ++ C + +D + D
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSGVEL--DRITYNIMIQGCCKASKMDEAIQLRDD 517
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ G PD T+N+ KV E+ + +M +P + T I A +
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A E +++NG+ P N L+ G G +SD
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDA 616
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 102/268 (38%), Gaps = 35/268 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + EA + +M++R + P+ + + FL T +V+E L L MK E
Sbjct: 501 GCCKASKMDEAIQLRDDMIKR-GFKPD-LFTFNIFLHTYCNLGKVEEILHLLDQMKSEGL 558
Query: 61 FPTLKFFSNALDILVKLNDSTHT---------------VQLWDIMVG-----------IG 94
P + + +D K D +++ ++G IG
Sbjct: 559 KPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIG 618
Query: 95 F-------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ P + YN+++ +C+ V+ V F Q + + Y +I +
Sbjct: 619 ILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFC 678
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+ E +F EM P + T + + E A ++++ ++ GI+P
Sbjct: 679 KIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSV 738
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNR 235
S N L+ G + L + EM ++
Sbjct: 739 SYNTLISGFCEVDSLDKMVESPAEMSSQ 766
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +E + VEA++ F EM+ P+ ++A+ + TL R V E+ + L +
Sbjct: 190 GFYEENHRVEAHELFEEMLG-LGICPD-IMAFNKLIHTLCRKGHVQESERLLNKVLKRGV 247
Query: 61 FP---TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P T+ F LN++ ++L D G+G L P++I YN ++ LC N V
Sbjct: 248 SPNLFTVNIFIQGFCQRAMLNEA---IRLLD---GVGRGLTPDVITYNTLICGLCKNFKV 301
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ +MV G PD TYN I + K + + + + P +
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I L + + AI ++N +E G+ P N L+ GL G + + EM
Sbjct: 362 INGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEM 416
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G++ A F E +E+ P VL T + L + + +ALK + M C
Sbjct: 364 GLCQDGDIDRAINVFNEAMEK-GLKPNLVLC-NTLVKGLSQQGLILQALKLMNEMSENGC 421
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ L K+ + L ++ I +P++ +N ++ C +DN
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNL--VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA 479
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M HG PD +TYN I L K K +V F M++ P +
Sbjct: 480 IEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTES 539
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
A + E A+ + + G+ P + L+ G + G L
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDL 581
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G +++A K EM E +P+ + Y + L + V +A + +
Sbjct: 399 GLSQQGLILQALKLMNEMSEN-GCSPD-IWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + F+ +D K + +++ D M G + P++I YN+++ LC ++V
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS--PDVITYNSILNGLCKAGKYEDV 514
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ G P+ +TYN++ E K +KV E N EM P +N T +
Sbjct: 515 MGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Query: 181 LLDADEPEFAIEIWNYILE 199
D + + A +++ + E
Sbjct: 575 FCDNGDLDGAYQLFKRVDE 593
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + +V EA +LR M E P +++ +D KL + Q+
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVD---NVF------------------------ 121
GF +P+ Y +++ LC + D+D NVF
Sbjct: 345 DGAFKGF--VPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQ 402
Query: 122 --------RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ ++M +G PD TYN++ L K V + +N + I P
Sbjct: 403 QGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFT 462
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
T I + + AIEI + + +G+ P + N +L GL G+ DV + M+
Sbjct: 463 FNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM 522
Query: 234 NR----RILIYDVTMQKLKKA 250
+ I+ Y++ + KA
Sbjct: 523 EKGCVPNIITYNILTESFCKA 543
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 42/224 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + TF M+E+ +++ Y + + ++V+EAL + M+ +
Sbjct: 504 GLCKAGKYEDVMGTFKLMMEK--GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561
Query: 61 FPT-------LKFFSNALDI-----LVKLNDS----THTVQLWDIMVGIG---------- 94
P +K F + D+ L K D +HT+ ++IM+
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621
Query: 95 --FNLM------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
FN M P+ Y ++ C ++++ + F + G P T+ + CL
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
++VHE H M+ P +N + +AD+ E A
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVPEVVN------TIFEADKKEVA 719
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 92/233 (39%), Gaps = 5/233 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ ++G + EA F E ++ F P V +Y + L+ + D+A K M+ +
Sbjct: 86 YGRKGKIQEAVDVF-ERMDFFNCEPS-VQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIV 143
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + F+ + + + +L + M G + + Y V+G N
Sbjct: 144 PDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCE--SSAVAYCTVIGGFYEENHRVEAH 201
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F++M+ G PD + +N + L + V E E ++++K P I
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
AI + + + G+ P + N L+ GL ++ + + +M+N
Sbjct: 262 CQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
FN P++ YNA++ +L D + + +M G PD T+ + + + + H
Sbjct: 105 FNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHA 164
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ M + + + T I + + A E++ +L GI P + N L+
Sbjct: 165 ARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIH 224
Query: 215 GLRNLGRLSDVRRFAEEMLNRRI 237
L G + + R ++L R +
Sbjct: 225 TLCRKGHVQESERLLNKVLKRGV 247
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 58/153 (37%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YN V+ LC V + + G PD T+N + + K K+
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M + P + + + L A + E + + ++E G +P + N+L
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
++ + EEM N+ + V L K F
Sbjct: 543 ARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG+++ A F + ++ P V+++ T + IR +DE + M P
Sbjct: 137 KEGDIMVAQSVF-NAITKWGLRPS-VVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPD 194
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +++D M+ G L+PN + + ++ C N VD
Sbjct: 195 VYTYSVLINGLCKESKMDDANEMFDEMLDKG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 252
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 253 YKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL R D + EML+
Sbjct: 313 EGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLS 363
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 158 PSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 215
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 216 EMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGL 275
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 276 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDD 335
Query: 242 VTMQKLKKAFYNESR 256
V L E R
Sbjct: 336 VAYTALISGLCQEER 350
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 10/223 (4%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEH--VLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
G ++EA++ F +M E H V+ Y+ L+ + ++EA + MK F
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDI---MVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
L+ ++ L L++ + ++ W + M+GIG P++ YN V+ LC N + +
Sbjct: 325 NLESYNIWLLGLIR---NGKLLEAWIVLKEMLGIGIE--PDIYSYNIVMDGLCKNGMLSD 379
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
M+ +G PD++TY+ + KV E N HEMI N P C +
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L A + + E G + N+++ L N G+L
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQL 482
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 31/269 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + EA KT + ++R N ++ +Y +L+ LIR ++ EA L+ M G
Sbjct: 300 GFCKEGMLEEA-KTLVDTMKR-NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGI 357
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K + L +M+ G ++P+ + Y+ ++ C+ V
Sbjct: 358 EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG--ILPDTVTYSTLLHGYCSKGKVFEA 415
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ + P++ T N++ L K ++ E EN +M + + + C I
Sbjct: 416 NNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINA 475
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASAN-----------------------VLLVGLR 217
L + + + AIEI N + +G L N ++ GL
Sbjct: 476 LCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLC 535
Query: 218 NLGRLSDVRRFAEEMLNRRI----LIYDV 242
GRL D ++ EM+++ + IYD
Sbjct: 536 KAGRLDDAKKKFIEMMSKGLQPDSAIYDT 564
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 29/275 (10%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G+ +G V EAN EM+ +P + L +L + ++ EA L+ M KG
Sbjct: 405 GYCSKGKVFEANNLLHEMISN-NCSP-NTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462
Query: 59 N-----CFPTLKFFSN--ALDILVKL------NDSTHTVQLWDIMVGI------GFNLMP 99
C + N LD +++ + S L + +G+ G P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+L+ Y+ ++ LC +D+ + F +M+ G PDS Y+ + K+
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI---LENGILPLEASANVLLVGL 216
+M K T T +++L E++ I E G+ P + N +L L
Sbjct: 583 KDMEKRGCNKT---LQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCL 639
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
GR++D +EML + I + + L KAF
Sbjct: 640 CEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 3/233 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +VL Y T + + + + +A K + M+ + P ++ F++ + L +
Sbjct: 215 PNNVL-YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASR 273
Query: 86 LW-DIMVGIGFNL-MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
++ D+ + L PN+I Y ++ C ++ D M + F + +YN+
Sbjct: 274 IFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWL 333
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
LI+N K+ E EM+ +P + + L A + ++ NGIL
Sbjct: 334 LGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGIL 393
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
P + + LL G + G++ + EM++ T L + + E R
Sbjct: 394 PDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGR 446
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 52/134 (38%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +YN ++ N V+ V + MV P++ T+N++ L + + +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F +M +P + A +E+ + GILP N L+
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 219 LGRLSDVRRFAEEM 232
G+ D + ++M
Sbjct: 230 EGKTHDAEKLVDKM 243
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 93/258 (36%), Gaps = 43/258 (16%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L +++A + M C P F + + ++ ++L M +G ++
Sbjct: 157 LCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMG--IL 214
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
PN ++YN ++ C + + D+M G P T+N L + K+ E
Sbjct: 215 PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRI 274
Query: 159 FHEMIKNE--WQPTPLNCATAITMLLD------ADEPEFAIE---------------IW- 194
F +M +E P P N T ML+ +E + ++ IW
Sbjct: 275 FRDMQIDEELGLPHP-NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWL 333
Query: 195 ----------------NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+L GI P S N+++ GL G LSD R M+ IL
Sbjct: 334 LGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGIL 393
Query: 239 IYDVTMQKLKKAFYNESR 256
VT L + ++ +
Sbjct: 394 PDTVTYSTLLHGYCSKGK 411
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + EA + EM E + + V AY + + ++D+A + M+
Sbjct: 297 GYCKDGRMEEAERVVKEMKETGDIVVDEV-AYGMMINGYCQRGRMDDATRVRNEMRDAGI 355
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L ++ ++ L KL ++ M +G + P+ YN ++ C +
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG--MRPDKYSYNTLIDGYCREGSMRKA 413
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F MV +G +LTYN + + + + + M+K P ++C+T +
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L A + E A+ +W L G+ + N ++ GL +GR+++ AEE+L+R
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE----AEELLDR 524
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 23 EWNPEHV-LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
+ NP + + + L + ++ +A ++ + P +S+ +
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
L D+M+ G L PN+I YN+++ LC + + F+++ G P+ +TYN
Sbjct: 753 EAFSLRDVMLSAG--LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + K K E +M++ QPT + + I L E AI++ + ++EN
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENN 870
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ P + L+ G G + ++ + +EM R +L
Sbjct: 871 VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 4/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A F E + + P++ Y + + +DEA VM
Sbjct: 709 GLCKSGRIADAKSLF-ESLRNKRFLPDN-FTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ + L K + V L++ + G + PN I YN ++ C
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS--PNGITYNTLIDEYCKEGKTTEA 824
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ +MV G P +TY+++ L + E +MI+N P + T I
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+ + E ++++ + G+LP
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLP 908
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG++ +A + MV L Y T L +D+AL+ +M
Sbjct: 403 GYCREGSMRKAFEMCRMMVR--NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P S LD L K + + LW + G L N+I +N V+ LC +
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARG--LAKNVITFNTVINGLCKIGRMAEA 518
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M PDSLTY +F+ K ++ + ++M + P+ + IT
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + +I + + G+ P + L+ G G L + EM+N +
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Query: 241 DVTMQKLKKAFYNESR 256
L FY E +
Sbjct: 639 VFICSALMSCFYKEGK 654
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 103/281 (36%), Gaps = 65/281 (23%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
++V+ + T + L + ++ EA + L MK C P + D KL L
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556
Query: 87 WDIMVGIGF---------------------------------NLMPNLIMYNAVVGLLCN 113
+ M +GF L PNL+ Y A++ C
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
++ + +MV +G P+ + + C K KV E +++ + P
Sbjct: 617 EGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP---G 673
Query: 174 CATA------ITMLLD--AD-EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
C+ + I+ ++D AD P A +W NV++ GL GR++D
Sbjct: 674 CSISTIEIDKISHVVDTIADGNPHSANVMW---------------NVIIFGLCKSGRIAD 718
Query: 225 VRRFAEEMLNRRILIYDVTMQKL-----KKAFYNESRSMRD 260
+ E + N+R L + T L +E+ S+RD
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 48/268 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KEGN+ EA + EMV NP +V + + +VDEA L+ + +
Sbjct: 613 GWCKEGNLHEACNLYFEMVNN-GMNP-NVFICSALMSCFYKEGKVDEANLVLQKLVNIDM 670
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN------- 113
P + +D + + D+ I G N +M+N ++ LC
Sbjct: 671 IPGCSISTIEIDKISHVVDT--------IADG---NPHSANVMWNVIIFGLCKSGRIADA 719
Query: 114 ----------------------------NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ +D F D M+ G P+ +TYN +
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L K+ K+ N F+++ P + T I + A ++ ++E GI P
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 839
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEML 233
+ ++L+ GL G + + + ++M+
Sbjct: 840 VITYSILIYGLCTQGYMEEAIKLLDQMI 867
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 106/294 (36%), Gaps = 47/294 (15%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
A F + E + ++++ L Q+ AL M C P+L+ +
Sbjct: 129 HAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188
Query: 70 ALDILVKLNDSTHTVQLWDIM--VGI-------------------------------GFN 96
L+ LV+ D ++ M G+ G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L NL+ Y+AV+ C ++ R + + G P+ +TY ++ + K+ ++ E E
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308
Query: 157 NFFHEMIK-NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
EM + + + I + A + N + + GI N ++ G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF------YNESRSMRDRFD 263
L LGR+ +V++ +EM DV M+ K ++ Y SMR F+
Sbjct: 369 LCKLGRMEEVQKVLQEM-------EDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 11/231 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA EM + + + Y + L + ++V +AL M + C P
Sbjct: 436 KEGRLEEARNVLDEMSGK--GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 493
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ + L K+N + L+ M+ G ++ N I YN ++ + +
Sbjct: 494 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEG--VIANTITYNTLIHAFLRRGAMQEALKL 551
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M+F G D +TYN + + L + + + F +M+ P ++C I L
Sbjct: 552 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A+E ++ G+ P + N L+ GL GR A+E LN
Sbjct: 612 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR-------AQEALN 655
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 111/303 (36%), Gaps = 40/303 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA E + P+ + Y T ++ L + + A + + M+ + C
Sbjct: 362 GYVSRGRLDEAKAVMHESMLSVGCGPD-IFTYNTLILGLCKKGYLVSARELMNEMQIKGC 420
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + D M G G L N + YN ++ LC + V +
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL--NAVGYNCLISALCKDEKVQDA 478
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM-----IKNE--------- 166
F M G PD T+N + L K K E + +M I N
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538
Query: 167 ------------------WQPTPLNCAT---AITMLLDADEPEFAIEIWNYILENGILPL 205
++ PL+ T I L A E + ++ ++ G+ P
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR--DRFD 263
S N+L+ GL G + F +M++R + VT L R+ + FD
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 658
Query: 264 SLE 266
L+
Sbjct: 659 KLQ 661
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 41 RGKQVDEALKFLRVMKG-ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
R +A + L M+G +C PT + ++ LD+L+ N ++ M+ G + P
Sbjct: 158 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS--P 215
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+ + V+ LC N+VD+ M HG P+++ Y + L K +V+EV
Sbjct: 216 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLL 275
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM+ P AI L A ++ + +L G P + VL+ GL +
Sbjct: 276 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 335
Query: 220 GRLSDVRRFAEEMLNRRILIYDV 242
G++ + R ++ N +++++
Sbjct: 336 GKVDEARMLLNKVPNPNVVLFNT 358
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHT 83
NP VL + T + + ++DEA + M C P + ++ + L K
Sbjct: 350 NPNVVL-FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L + M G PN+I Y ++ C ++ D+M G +++ YN +
Sbjct: 409 RELMNEMQIKGCE--PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K++KV + N F +M +P + I L ++ E A+ ++ +L G++
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ N L+ G + + + +ML R + D+T L KA
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA K +M+ F P + Y + L R +++ L M + P
Sbjct: 541 RRGAMQEALKLVNDML--FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L + + H ++ M+ G L P+++ YN+++ LC
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRG--LTPDIVTYNSLINGLCKTGRAQEALNL 656
Query: 124 FDQMVFHGAFPDSLTYNMIFE 144
FD++ G PD++TYN +
Sbjct: 657 FDKLQVEGICPDAITYNTLIS 677
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 7/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y+T + L + +V+E LK L M C P + F++A+ L K+ +L
Sbjct: 251 NAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 310
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ GF PN Y ++ LC VD +++ P+ + +N + +
Sbjct: 311 DRMLLRGFT--PNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYV 364
Query: 148 KNKKVHEVENFFHE-MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ E + HE M+ P T I L A E+ N + G P
Sbjct: 365 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 424
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ +L+ GRL + R +EM + + + V L A + +
Sbjct: 425 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 12/227 (5%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+VD A L+ M C P + + L K+ ++L + M+ +G +P++
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG--CIPDVNT 289
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+N + LC + + D+M+ G P+S TY ++ L + KV E +++
Sbjct: 290 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV- 348
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWN-YILENGILPLEASANVLLVGLRNLGRL 222
P + T I + + A + + +L G P + N L++GL G L
Sbjct: 349 ---PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 405
Query: 223 SDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
R EM ++ Y + + + K+ E+R++ D
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 2/229 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y F+ L V++AL ++ ++ + +++ +D L K L M
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L N + NA++G L ++ + F +M +G P ++YN++ L K
Sbjct: 456 SKHGVEL--NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K E F EM++N W+P + + L + + A+E+W+ L++G+ N
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+L+ GL ++G+L D M +R VT L + F+ S R
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 46 DEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
D+AL F R+ + C P ++ ++ L+ V+ L+ G + PNL Y
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG--VAPNLQTY 152
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ + C + + F D M G PD +Y+ + L K K+ + F EM +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLS 223
P I L + + A+E+W+ +LE+ + P + N+++ GL GR+
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 224 DVRRFAEEM 232
D + E M
Sbjct: 273 DCLKIWERM 281
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + + L ++D+A+ + M+ NC L ++ ++ K+ DS +W
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M +G L P++I YN ++ LC V FFD HG FP T+N++ ++
Sbjct: 629 YMYKMG--LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V +Y T + L + ++D+AL+ M P + ++ +D +K D ++LWD
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
++ ++ PN+ +N ++ L VD+ + +++M + D TY+ + L
Sbjct: 244 RLLEDS-SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V + E+ F+E+ + + + T + + + ++E+W I+E+ S
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVS 361
Query: 209 ANVLLVGLRNLGRLSDV 225
N+L+ GL G++ +
Sbjct: 362 YNILIKGLLENGKIDEA 378
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V++Y + L + + EA F++ M P LK +S L L + ++LW
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G L +++M+N ++ LC+ +D+ M + +TYN + E K
Sbjct: 559 QFLQSG--LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + M K QP ++ T + L +A+E ++ +GI P +
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 209 ANVLLVGLRN 218
N+L+ + N
Sbjct: 677 WNILVRAVVN 686
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EM E P +V+ Y + ++ K+V A + M E C P
Sbjct: 530 KAGLIEQARKWFNEMRE-VGCTP-NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ +S +D K Q+++ M G + F PN++ Y A++
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
C ++ V+ + D M G P+ + Y+ + + L K K+ E + EM ++ +
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
T ++ I + A ++ + +LEN P ++ GL +G+ + +
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 230 EEM 232
+ M
Sbjct: 768 QMM 770
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T L + KQ+ + L +M E C+P+ K F++ + D ++ +L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND------VDNVFRFFDQMVFHGAFPDSLTYNM 141
MV G MP ++YN ++G +C + D +D + + +M+ G + + +
Sbjct: 396 KKMVKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + + EMI + P + + L +A + E A ++ + G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
++ + +++ G + R++ EM
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + EM E P + Y + + + K+ D A K L M +C
Sbjct: 683 GLCKVGKLDEAQEVKTEMSE--HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G PN++ Y A++ ++
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYTAMIDGFGMIGKIETC 798
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
++M G P+ +TY ++ + KN + N EM + W PT
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW-PT 847
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+G GF +P+ Y+ V+ LCN + ++ F F++M G D TY ++ + K
Sbjct: 474 MIGQGF--IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F+EM + P + I L A + +A E++ +L G LP +
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ L+ G G++ + E M +
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSK 618
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
+VE + P+ V Y + L +EA+ FL M+ +C P + +S L +
Sbjct: 292 LVETENFVPDTVF-YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ ++M+ G P+ ++N++V C + D ++ +MV G P +
Sbjct: 351 KQLGRCKRVLNMMMMEG--CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 138 TYNMIFECLIKNKK------VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + +K + E + EM+ +N ++ L A + E A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ ++ G +P ++ + +L L N ++ EEM R L+ DV
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADV 518
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG--KQVDEALKFLRVMKGENCF 61
K G + A+ EM ++ W P H Y +I G K+ E+L L + ++
Sbjct: 826 KNGALDVAHNLLEEM-KQTHW-PTHTAGYRK----VIEGFNKEFIESLGLLDEIGQDDTA 879
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P L + +D L+K ++L + + L+ YN+++ LC N V+ F
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ F +M G P+ ++ + + L +N K+ E
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + + + +++D+AL+ M NC L+ + +++L+K +
Sbjct: 299 VITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVS 358
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G L PN+++Y +++ C V F M G P++ TY+ + LI+
Sbjct: 359 EMFANG--LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQ 416
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++K+H+ +M ++ P + T I E + A ++ + +NG+ P E +
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
NVL L GR + F ++ + +++ VT L F
Sbjct: 477 YNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 516
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA +T EM +V+ Y + + + +V AL+ R+M+ E C P +S+
Sbjct: 352 EAKETVSEMFA--NGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSS 409
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L++ + L M G + P +I Y ++ C ++ DN FR F+ M
Sbjct: 410 LIYGLIQDQKLHKAMALITKMQEDG--ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+G PD YN++ L K+ + E +F +++ T + + + A +F
Sbjct: 468 NGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDF 524
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQ 245
A + ++ G + +VLL L +L++ ++M + I+ Y + +
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIIS 584
Query: 246 KL-KKAFYNESRSM 258
++ K+ ++ ++SM
Sbjct: 585 EMIKEGKHDHAKSM 598
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM+E+ P+ AY L + + +EA FL V KG T +++ +D K
Sbjct: 463 EMMEQNGLTPDE-QAYNVLTHALCKSGRAEEAYSFL-VRKG--VVLTKVTYTSLVDGFSK 518
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
++ L + MV G + Y+ ++ LC ++ DQM G +
Sbjct: 519 AGNTDFAAVLIEKMVNEGCK--ADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ Y +I +IK K ++ F+EMI + +P+ I+ + E A +
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636
Query: 197 ILENGILPLEASANVLLVGLRNLGRL 222
+ +G+ P + NV + G ++G +
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYM 662
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA GEM ER P+ V+ Y F+ +D A L+ M +C P
Sbjct: 623 KIGQIEEAEHLIGEM-ERDGVAPD-VVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680
Query: 64 -------LKFFSNALDILVKLNDST--------HTV-QLWDIMVGIGFNLMPNLIMYNAV 107
LK F + D++ TV QL + MV G N P + Y+++
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLN--PTAVTYSSI 738
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ C ++ FD M P+ Y M+ +C K + +F +MI+ +
Sbjct: 739 IAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGF 798
Query: 168 QP 169
QP
Sbjct: 799 QP 800
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+MV G +L NL Y ++ LC + R ++M G P TYN + + K
Sbjct: 185 MMVQDGCSL--NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCK 242
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ ++ + M +N P I L ++P+ A E+ N + G P +
Sbjct: 243 SGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVIT 301
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ G R+ D R ML+
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLS 327
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 24/269 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KEG + +A ++ EM E +++ T + L R ++DEA ++ M
Sbjct: 621 GWCKEGMLDKAFSSYFEMTE--NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 61 FPTLKFF-------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
FP + F + I L++S T L+PN I+YN + LC
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADSLDESCKTF------------LLPNNIVYNIAIAGLCK 726
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
VD+ RFF + G PD+ TY + V E EM++ P +
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I L ++ + A +++ + + G+ P + N L+ G +G + + ++M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 234 NRRILIYDVTMQKLKKAFYNES---RSMR 259
I VT L RSM+
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMK 875
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+V A M E+ +V+ Y + + ++DEA K LR M+ E
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEK--GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 61 F-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + +D + V+L D M+ +G L NL + N+++ C ++
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG--LKTNLFICNSLINGYCKRGEIHE 385
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+MV PDS +YN + + + E N +M++ +PT L T +
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L + A++IW+ +++ G+ P E + LL GL
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 3/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + EA K M E P+ AY + R ++D+A++ L M
Sbjct: 305 GYCKQCKMDEAEKVLRGMQEEAALVPDE-RAYGVLIDGYCRTGKIDDAVRLLDEMLRLG- 362
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T F N+L H + I + +NL P+ YN ++ C
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAE-GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M+ G P LTYN + + L + + +H M+K P + +T +
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E A +W IL G + N ++ GL +G++ + ++M
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + L + +VD+A +F ++ + P + + + +L D
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G L+PN++ YNA++ LC + +VD R F ++ G FP+ +TYN + + K
Sbjct: 775 MLRRG--LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ +MI+ P+ + + I L + E ++++ N +++ G+
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G +VEA + F +M + +P+ + Y T + + V +A K M+ E
Sbjct: 516 GLCKMGKMVEAEEIFDKMKD-LGCSPDGI-TYRTLIDGYCKASNVGQAFKVKGAMEREXI 573
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P+++ +++ + L K S V+ D++ +G L PN++ Y A++ C +D
Sbjct: 574 SPSIEMYNSLISGLFK---SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F + +M +G + + + + L + ++ E +M+ + + P
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH-------E 683
Query: 180 MLLDADEPEFAIEIWNYILENG----ILPLEASANVLLVGLRNLGRLSDVRRF 228
L +D AI+ L+ +LP N+ + GL G++ D RRF
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ GNV EA + EM+ R +++ Y + L + + VD A + + +
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRR--GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 815
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + ++ +D K+ + +L D M+ G + P+++ Y+A++ LC + D++
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS--PSVVTYSALINGLCKHGDIERS 873
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+ +QM+ G + Y + + K ++EM K E +NC
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN-------YNEMSKPEALKQNMNC 920
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 9/249 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G A+ + +M+ R P+ V + + +VDEA F++ M+ P
Sbjct: 203 KNGETHTAHYVYQQMI-RVGIVPD-VFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 260
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + + ++ V L D + M G + N++ Y ++ C +D +
Sbjct: 261 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS--RNVVTYTLLIKGYCKQCKMDEAEKV 318
Query: 124 FDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M A PD Y ++ + + K+ + EM++ + C + I
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----L 238
E A + +++ + P S N LL G G S+ ++ML I L
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438
Query: 239 IYDVTMQKL 247
Y+ ++ L
Sbjct: 439 TYNTLLKGL 447
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 22/243 (9%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ F + V + + +V +Y + L RG+ DE +L N
Sbjct: 84 ASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL----------------NQ 127
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L L K D + + WD +VG+ + +++ ++ + N FD M
Sbjct: 128 LVDLCKFKDRGNVI--WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 185
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P + N + L+KN + H + +MI+ P + + + + A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR----FAEEMLNRRILIYDVTMQK 246
+ G+ P + + L+ G +LG + + +E+ ++R ++ Y + ++
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 247 LKK 249
K
Sbjct: 306 YCK 308
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ F L + V+ + + + ++D M G +P+L N+++ L N +
Sbjct: 156 PTV--FDMILKVYVEKGLTKNALYVFDNMGKCG--RIPSLRSCNSLLNNLVKNGETHTAH 211
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ QM+ G PD +++ K+ KV E F +M +P + + I
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + E A + ++ E G+ + +L+ G ++ + + M L+ D
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 331
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G V A TF EM++ P+ V A T L R ++++ L F ++ + P++
Sbjct: 184 GKVKLAEVTFLEMLQA-GCEPDAV-ACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSIS 241
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
F+ + L K + LW+ M+ N+ PN Y V+G ++ F
Sbjct: 242 VFNFMVSSLQKQKLHGKVIHLWEQMLEA--NVAPNQFTYTVVIGSYAKEGMLEEAMDAFG 299
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
+M P+ TY+++ K+ K E + EM P+ CA+ +T+ +
Sbjct: 300 EMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNE 359
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD---- 241
+ A+ +++ + +N I+P E +L+ LG D +R EE +++ L+ D
Sbjct: 360 DYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEE-IDKAGLLSDEQTY 418
Query: 242 VTMQKLKKAFYNESRSMR 259
V M ++ N R+++
Sbjct: 419 VAMAQVHMNVQNYDRALQ 436
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 11/231 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + EA EM + + + Y + L + ++V +AL M + C P
Sbjct: 454 KEGRLEEARNVLDEMSGK--GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 511
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ F++ + L K+N + L+ M+ G ++ N I YN ++ + +
Sbjct: 512 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEG--VIANTITYNTLIHAFLRRGAMQEALKL 569
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M+F G D +TYN + + L + + + F +M+ P ++C I L
Sbjct: 570 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A+E ++ G+ P + N L+ GL GR A+E LN
Sbjct: 630 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR-------AQEALN 673
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 111/303 (36%), Gaps = 40/303 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA E + P+ + Y T ++ L + + A + + M+ + C
Sbjct: 380 GYVSRGRLDEAKAVMHESMLSVGCGPD-IFTYNTLILGLCKKGYLVSARELMNEMQIKGC 438
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D K + D M G G L N + YN ++ LC + V +
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL--NAVGYNCLISALCKDEKVQDA 496
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM-----IKNE--------- 166
F M G PD T+N + L K K E + +M I N
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556
Query: 167 ------------------WQPTPLNCAT---AITMLLDADEPEFAIEIWNYILENGILPL 205
++ PL+ T I L A E + ++ ++ G+ P
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR--DRFD 263
S N+L+ GL G + F +M++R + VT L R+ + FD
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 676
Query: 264 SLE 266
L+
Sbjct: 677 KLQ 679
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 41 RGKQVDEALKFLRVMKG-ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
R +A + L M+G +C PT + ++ LD+L+ N ++ M+ G + P
Sbjct: 176 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS--P 233
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+ + V+ LC N+VD+ M HG P+++ Y + L K +V+EV
Sbjct: 234 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLL 293
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
EM+ P AI L A ++ + +L G P + VL+ GL +
Sbjct: 294 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 353
Query: 220 GRLSDVRRFAEEMLNRRILIYD 241
G++ + R ++ N +++++
Sbjct: 354 GKVDEARMLLNKVPNPNVVLFN 375
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHT 83
NP VL + T + + ++DEA + M C P + ++ + L K
Sbjct: 368 NPNVVL-FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L + M G PN+I Y ++ C ++ D+M G +++ YN +
Sbjct: 427 RELMNEMQIKGCE--PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K++KV + N F +M +P + I L ++ E A+ ++ +L G++
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ N L+ G + + + +ML R + D+T L KA
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G + EA K +M+ F P + Y + L R +++ L M + P
Sbjct: 559 RRGAMQEALKLVNDML--FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L + + H ++ M+ G L P+++ YN+++ LC
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRG--LTPDIVTYNSLINGLCKTGRAQEALNL 674
Query: 124 FDQMVFHGAFPDSLTYNMIFE 144
FD++ G PD++TYN +
Sbjct: 675 FDKLQVEGICPDAITYNTLIS 695
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 7/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ + Y+T + L + +V+E LK L M C P + F++A+ L K+ +L
Sbjct: 269 NAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 328
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ GF PN Y ++ LC VD +++ P+ + +N + +
Sbjct: 329 DRMLLRGFT--PNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYV 382
Query: 148 KNKKVHEVENFFHE-MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
++ E + HE M+ P T I L A E+ N + G P
Sbjct: 383 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ +L+ GRL + R +EM + + + V L A + +
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 12/227 (5%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+VD A L+ M C P + + L K+ ++L + M+ +G +P++
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG--CIPDVNT 307
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+N + LC + + D+M+ G P+S TY ++ L + KV E +++
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV- 366
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWN-YILENGILPLEASANVLLVGLRNLGRL 222
P + T I + + A + + +L G P + N L++GL G L
Sbjct: 367 ---PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423
Query: 223 SDVRRFAEEM----LNRRILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
R EM ++ Y + + + K+ E+R++ D
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A K F EM++R +V Y L +L ++DEA++ L MK + C
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIM--PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGC 273
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L L K+ Q ++ GF L L Y+ ++ L D
Sbjct: 274 LPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL--GLKGYSCLIDGLFQARRFDEG 331
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M+ PD + Y ++ + ++ + +F M K + P T + +
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + E A + + +L+N ++ + +++ GL G + + + +EM
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451
Query: 241 DVTMQKLKKAFYNESR 256
+T L FY E R
Sbjct: 452 VMTYNALIDGFYREGR 467
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 4/230 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
G +A + F M E F+ P Y T L L+ + AL M C P
Sbjct: 148 SSAGRNADAVQAFSRMDE-FQSRPT-AFVYNTILKALVDSGVILLALALYNRMVAAGCAP 205
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +D L K + ++++D M+ G +MPN+ +Y ++ LCN +D +
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRG--IMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +TYN L K +V+E + + + I L
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + + +LE I P +++ G GR+ D F + M
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 17/255 (6%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
+ M+ER +P+ VL Y + ++++AL FL VMK + P ++ L +L
Sbjct: 335 YKTMLER-NISPDVVL-YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
D L M + NL+ + ++ LC VD + FD+M HG P
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDP 450
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE------ 188
+TYN + + + ++ E FH+M L + D++
Sbjct: 451 TVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDM 510
Query: 189 -------FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A ++ I+++G++P + N L+ GL L R +E+ + I +
Sbjct: 511 CQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE 570
Query: 242 VTMQKLKKAFYNESR 256
+T L R
Sbjct: 571 ITYGTLIDGLLRAHR 585
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGEN 59
G K G V EA + F EM E +P V+ Y + R +++EA + F ++ G N
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEH-GCDPT-VMTYNALIDGFYREGRLEEARMLFHKMEMGNN 483
Query: 60 CFPTLKFF--------SNALDILVK-LNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVG 109
L+ S +L LV + S ++ + ++ I ++P+++ YN ++
Sbjct: 484 PSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC ++D R F ++ G PD +TY + + L++ + ++ F ++++ P
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSP 603
Query: 170 T 170
+
Sbjct: 604 S 604
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 33 ETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK---LNDST---HTVQ 85
+T +I L + VDEA++ M C PT+ ++ +D + L ++ H ++
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 86 LWD-----IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ + + + +G N + + +V +C + V ++ ++ G PD +TYN
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K + + F E+ P + T I LL A A+ ++ IL++
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS 599
Query: 201 GILPLEASANVLLVGLRNLGRLS 223
G P + N ++ L + +LS
Sbjct: 600 GSSPSLSIYNSMMRSLCRMKKLS 622
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + + +PT T + L+D+ A+ ++N ++ G P A+ NVL+ GL
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
G D + +EML+R I+ IY V + L A
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 4/240 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ +A F E+ +R P V ++ T + L + + +DE + + M+ +P
Sbjct: 235 KEGSIRDAKLIFNEIRKR-GLRPTTV-SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S + L K QL+D M G L PN I + A++ + +D+
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG--LRPNGITFTALIDGQYRSRRMDSAMNT 350
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ G PD + YN + L K V++ EM +P + T I
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCK 410
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ E A+EI + E G++ + L+ G GR+ D R EM+ + D T
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 45/296 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + A + F EM +R P + + + R +++D A+ M
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQR-GLRPNGI-TFTALIDGQYRSRRMDSAMNTYHQMLTMGV 359
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV--- 117
P L ++ L+ L K+ D +L D M +G + P+ I Y ++ C D+
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG--MKPDKITYTTLIDGYCKEGDLESA 417
Query: 118 --------------DNVF------------------RFFDQMVFHGAFPDSLTYNMIFEC 145
DNV R +MV G PD TY M+ +
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K V EM N +P + + L + + A + +L G+ P
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
+ + N+LL G G+ D+ + + N + LI D + YN +S++DR
Sbjct: 538 DITYNILLEGHCKNGKAEDLLK----LRNEKGLIVDYAYYTSLVSEYN--KSLKDR 587
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ N+N ++ F+ +++ +G P YN++ K + + + F+E+ K +PT
Sbjct: 198 MINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPT 257
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
++ T I L + + + + EN I P + +VL+ GL GRL + +
Sbjct: 258 TVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFD 317
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESR 256
EM R + +T L Y R
Sbjct: 318 EMQQRGLRPNGITFTALIDGQYRSRR 343
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F +M R P + Y + + ++EA ++ M + P + ++
Sbjct: 376 DARELFADMNRR--GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV--------- 120
+D L K + + L++ M +G PN +N ++ LC + +D
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCT--PNRRSHNTIILGLCQQSKIDQACQRGKLDEA 491
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR +M G PD +TY+ + L +V + + +M+K + +PT + T I
Sbjct: 492 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 551
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + A E+ + ++ +G P + N L+ G G+ R +M+ R +
Sbjct: 552 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 611
Query: 241 DVTMQKLKKAFYNESR 256
VT L +R
Sbjct: 612 VVTYTALVSGLCKANR 627
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD----IMVGIGFN 96
RG QVD+A + LR M E C P + LD L K V+L+ +
Sbjct: 225 RG-QVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSS 283
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
P+L YN V+ LC N+ +D + F++M PDS +Y ++ + L K K+++
Sbjct: 284 SPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDAR 343
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
N F +++ + P+ + + I L A+ + A E++ + G P + NV++
Sbjct: 344 NLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDAS 403
Query: 217 RNLGRLSD----VRRFAEEMLNRRILIYDVTMQKLKKA 250
G L + +++ E+ ++ Y+ M L K+
Sbjct: 404 CKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 441
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 6/220 (2%)
Query: 1 GWEKEGNVVEANKTFGE----MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G K G V EA + FG+ +P + Y ++ L + ++DEA++ M
Sbjct: 256 GLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMN 315
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
N P + +D L K L+ ++ G P+ + Y +++ LC N
Sbjct: 316 ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT--PSTVAYTSLIHGLCMANS 373
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
D+ F M G P +TYN++ + K + E + +MI++ P + T
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ L + E A+ ++N + G P S N +++GL
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 21/272 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI----------RGKQVDEALK 50
G K V EA F EM ER P ++ T ++ L RGK +DEA +
Sbjct: 437 GLCKSSRVEEALLLFNEM-ERLGCTPNR-RSHNTIILGLCQQSKIDQACQRGK-LDEAFR 493
Query: 51 FLRVMKGENCFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
L+ M + P + +S + L + +++D+ H L + MV P ++ N +
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH---LLEDMVK--RQCKPTVVTQNTL 548
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ LC + D MV G PD +TYN + + + +M+
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR 227
P + ++ L A+ A ++ + +G P + L++G + G++ +
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
EM+ I V L RS R
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 700
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 102/285 (35%), Gaps = 56/285 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + MV + +P+ V+ Y T + R Q + A + L M
Sbjct: 551 GLCKAGRIKEAREVLDAMVSSGQ-SPD-VVTYNTLVHGHCRAGQTERARELLSDMVARGL 608
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K N ++ M G PNL Y A++ C+ VD
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSG--CAPNLFTYTALILGFCSAGQVDGG 666
Query: 121 FRFFDQMVFHGAFPDSLTYNMI-------------------------------------F 143
+ F +MV G PD + Y +
Sbjct: 667 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 726
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L++ K+ F +M++ P P CA+ + L + + A + I++
Sbjct: 727 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD---- 782
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
L G + G+ + +F EEM+ + I D + LK
Sbjct: 783 --------LAYGGKARGKAA---KFVEEMVGKGYEIEDAVLGPLK 816
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 13/231 (5%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +M+E + + V+ Y T + L + +V+EAL M+ C P
Sbjct: 405 KRGMLEEACDLIKKMIE--DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 462
Query: 64 LKFFSNALDILVKLNDSTHTVQ---------LWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
+ + + L + + Q L M G +P+++ Y+ ++ LC+
Sbjct: 463 RRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH--VPDVVTYSTLISGLCSI 520
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
VD+ + MV P +T N + L K ++ E M+ + P +
Sbjct: 521 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 580
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
T + A + E A E+ + ++ G+ P + L+ GL RL +
Sbjct: 581 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 15/247 (6%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD-ILVKLNDSTHTVQLWDI 89
AY ++ L + +VD+AL+ R M + + + +LD +LV L DS + +
Sbjct: 147 AYNIVVVALCKAARVDDALELARTMSEKR----IPLAAGSLDSVLVGLMDSGRIDEALQV 202
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
P L+ N ++ C+ VD M PD ++Y + + L K
Sbjct: 203 YR--ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKA 260
Query: 150 KKVHEVENFF--HEMIKNEWQPTPLNCATA----ITMLLDADEPEFAIEIWNYILENGIL 203
+V E F E+ + + I L D + A++++ + E +
Sbjct: 261 GRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVS 320
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF--YNESRSMRDR 261
P S +L+ GL G+L+D R +++L+ + V L N R+
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380
Query: 262 FDSLERR 268
F + RR
Sbjct: 381 FADMNRR 387
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 11/198 (5%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP F++ + + + V+++ +M P +YN ++ L + + V
Sbjct: 7 FPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH---SPYPDVYNVLIDSLSKRQETEAV 63
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV G FPDS T+ I L K K+ E E EM P +
Sbjct: 64 KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASA--NVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L E A ++ I+P+ S+ N+++V L R+ D A M +RI
Sbjct: 124 LCLRGSMERAFQLLE------IMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177
Query: 239 IYDVTMQKLKKAFYNESR 256
+ ++ + + R
Sbjct: 178 LAAGSLDSVLVGLMDSGR 195
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 30 LAYETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ + T L+ L + + EA FL M E P + +S A+D LVK+N ++L+
Sbjct: 560 IKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQ 619
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G P+++ +N ++ C V+ + F +M G P +++YN++ K
Sbjct: 620 DICTRGCR--PDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCK 677
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N + + +M + +PT ++ T I ++ P+ A +WN + E G P +
Sbjct: 678 NGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRIT 737
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
++ GL G+ + + M
Sbjct: 738 YMAIVHGLCKCGKPDEALVYYHSM 761
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
D AL M C ++N +D L K + + +L M L P YN
Sbjct: 472 DAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQ--SRLQPTHFTYN 529
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ G LC D +M HG P ++ + L KN + E NF +M+
Sbjct: 530 SIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCE 589
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ P ++ + A+ L+ ++ + A+E++ I G P S N+L+ G G++++
Sbjct: 590 GFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEA 649
Query: 226 RRFAEEM 232
F +M
Sbjct: 650 YNFLHKM 656
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 2/186 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+++ + + +V+EA FL M+ P+ ++ ++ K D +
Sbjct: 630 VVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLS 689
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M N P +I Y ++ CN+ D+ +++M G P+ +TY I L K
Sbjct: 690 QMNE--ENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCK 747
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K E ++H M + E +P I + A I +E G +P
Sbjct: 748 CGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTD 807
Query: 209 ANVLLV 214
N + +
Sbjct: 808 KNYVTI 813
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 97 LMPNLIMYNAVV-GLLCNNN--DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
L+PN +N V+ GLL + D D F+ MV G D L YN + + L K+ ++
Sbjct: 448 LLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLK 507
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
E +M ++ QPT + L ++ AIE+ + +G P + +L+
Sbjct: 508 ESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLV 567
Query: 214 VGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
L GR + F +M+ I+ Y M L K
Sbjct: 568 KQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVK 607
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 21/243 (8%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF---------PTLKFFS 68
M+E F +P +V+ Y T +D K+ VM +N F P +S
Sbjct: 183 MLEEFGLSP-NVVIYTTL---------IDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYS 232
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
++ K Q+++ M G ++PN YN ++ CN VD F+ F +M
Sbjct: 233 VLMNGFFKQGLQREGFQMYENMKRSG--IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMR 290
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
G +TYN++ L + KK E H++ K P + I D + +
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD 350
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
A+ ++N + +G+ P + N L+ G + L+ +EM R I VT L
Sbjct: 351 TAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILI 410
Query: 249 KAF 251
AF
Sbjct: 411 DAF 413
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
AY + G VD+A K M+ + + ++ + L + V+L +
Sbjct: 265 AYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G L PN++ YN ++ C+ +D R F+Q+ G P +TYN + K +
Sbjct: 325 NKVG--LSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLE 206
+ + EM + P+ + T+L+DA + E A E+ + + ++G++P
Sbjct: 383 NLAGALDLVKEMEERCIAPSKV----TYTILIDAFARLNYTEKACEMHSLMEKSGLVPDV 438
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+ +VL+ GL G + + + + + + V + + E S R
Sbjct: 439 YTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 6/171 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K N+ A EM ER P V Y + R ++A + +M+
Sbjct: 377 GYSKVENLAGALDLVKEMEERC-IAPSKV-TYTILIDAFARLNYTEKACEMHSLMEKSGL 434
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S + L + +L+ +G +L PN ++YN ++ C
Sbjct: 435 VPDVYTYSVLIHGLCVHGNMKEASKLFK---SLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
R ++MV G P+ ++ L +++K E E +MI + +P+
Sbjct: 492 ALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/176 (17%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y T + + + + AL ++ M+ P+ ++ +D +LN + ++
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M G L+P++ Y+ ++ LC + ++ + F + P+S+ YN + K
Sbjct: 428 LMEKSG--LVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ +EM+ + P + + I +L ++ + A + ++ +G+ P
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKP 541
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 92/247 (37%), Gaps = 36/247 (14%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK----------LNDST 81
Y+T + + D+AL FL M E P F+N + +L++ N+
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 82 HTVQLWDIMVGI-------------GFNLM---------PNLIMYNAVVGLLCNNNDVDN 119
V L GI GF L+ PN+++Y ++ C +V
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVML 211
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +M G P+ TY+++ K E + M ++ P I+
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNR 235
+ + A +++ + E GI + N+L+ GL + + + ++ L+
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331
Query: 236 RILIYDV 242
I+ Y++
Sbjct: 332 NIVTYNI 338
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 10/243 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE + +A M+ HV Y + LI + D+A++ R M +C P
Sbjct: 141 KESKLEKAVSVLNGMIRSGCKPNTHV--YNALIKGLIGASKRDDAVRIFREMGTTDCPPN 198
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S +D L K L M+ G N P++I Y+ ++ LC + V+ +
Sbjct: 199 IATYSILIDGLCKGERFGEAYDLVKEMLEKGLN--PSVITYSLLMKGLCLGHKVEMALQL 256
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML-- 181
++Q+ G PD +N++ L K + + +M N W P N T T++
Sbjct: 257 WNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDM--NRWNCAP-NLVTQNTLMEG 313
Query: 182 -LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A+ IW IL+N + P S N+ L GL + R+SD F + + ++I+
Sbjct: 314 FYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPT 373
Query: 241 DVT 243
+T
Sbjct: 374 KIT 376
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 98/229 (42%), Gaps = 2/229 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E + Y + + ++++L L + + + +S ++ L K + V +
Sbjct: 92 EDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSV 151
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M+ G PN +YNA++ L + D+ R F +M P+ TY+++ + L
Sbjct: 152 LNGMIRSGCK--PNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGL 209
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ E + EM++ P+ + + + L + E A+++WN + + G P
Sbjct: 210 CKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDV 269
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N+L+ GL ++G+ +M VT L + FY +
Sbjct: 270 QMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDG 318
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + L L G Q +A+ + +MKG N + + LVK+ ++L++
Sbjct: 116 LVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFN 175
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M P+++ Y +++ C V+N FD MV G P+ + YN +
Sbjct: 176 SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYAS 235
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
E F+ + KN +P ++ + + + +PE A E++N + +N P + S
Sbjct: 236 RGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVS 295
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ + G L + EM
Sbjct: 296 YNALIDAYGSAGMLKEAVGLLHEM 319
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 37/269 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA + F M ER P V+ Y + + + QV+ +M E P
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPN 222
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ L + +++++ G L P+++ Y +++ + +
Sbjct: 223 IVAYNSLLGAYASRGMHREALAIFNLIKKNG--LRPDIVSYTSLLNAYGRSAQPEKAREV 280
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT------- 176
F++M + P+ ++YN + + + E HEM K+ QP ++ +T
Sbjct: 281 FNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Query: 177 ----------------------------AITMLLDADEPEFAIEIWNYILENGILPLEAS 208
I L + E A+E++ + E+ + P +
Sbjct: 341 CRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVT 400
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N+L+ G LG+ ++ RF E+M++ ++
Sbjct: 401 YNILISGSSKLGKYTESLRFFEDMVDSKV 429
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGE--NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN 96
L++ Q EA++ M+ C P + +++ + + ++D+MV G
Sbjct: 161 LVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG-- 218
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PN++ YN+++G + F+ + +G PD ++Y + ++ + +
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F++M KN +P ++ I A + A+ + + + ++GI P S + LL
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+++ + E +R I + V K++
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 12/224 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + V +A F EM E + P+ + Y + + R Q A+ + M
Sbjct: 21 YARHNQVDQARGLFFEMQE-WRCKPDADI-YNSLIHAHSRAGQWRWAINIMEDMLRAAIP 78
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT ++N ++ + ++L M G+G P+L+ +N V+ L N
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVG----PDLVTHNIVLSALKNGAQYSK 134
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+F+ M D+ T N+I CL+K + E F+ M + P + T +
Sbjct: 135 AISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTS 193
Query: 180 MLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
++ + E I++ ++ G+ P + N LL + G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+Y ++ L +N VD F +M PD+ YN + + + N +M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ PT I A + A+E+ + ENG+ P + N++L L+N +
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 223 SDVRRFAEEM 232
S + E M
Sbjct: 133 SKAISYFEIM 142
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + R + L L M+ + PTL + + ++ L K D L+
Sbjct: 238 HVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLF 297
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M G L PN+ +YN+V+ LC QM G PD +T+N + L
Sbjct: 298 LEMRKRG--LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 355
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
V + E+F E I+ E P L+ I E A ++ ++ G P
Sbjct: 356 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 415
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKK 249
+ L+ GL G++S+ E+M R++ IY+V + L K
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 57/144 (39%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +P+++ YN ++ C D+ +M G P +TY + CL K +
Sbjct: 232 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 291
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ + F EM K P + I L A+ I + +G P + N L+
Sbjct: 292 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLI 351
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
GL + G + F E + R +
Sbjct: 352 TGLCHEGHVRKAEHFLREAIRREL 375
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 4/237 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ GEM E + P ++ Y + + L + +++ M+
Sbjct: 248 GYCRRGDMGRGLLLLGEM-EAKGFLPT-LVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 305
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +++ +D L K +T + + M G + P++I +N ++ LC+ V
Sbjct: 306 SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD--PDIITFNTLITGLCHEGHVRKA 363
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + + P+ L+Y + ++ + EM+ P + I
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ A + A+ + + E + P NVL+ GL L + EEML + +
Sbjct: 424 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 480
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 18/198 (9%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV E FL IR + L + ++ G F A D+L+++ HT
Sbjct: 359 HVRKAEHFLREAIRRELNPNQLSYTPLIHG---FCMRGELMAASDLLMEMMGRGHT---- 411
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
P+++ + A++ L V ++M FPD YN++ L
Sbjct: 412 -----------PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 460
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + +N EM++ QP AT I + ++ A +I+ ++ G+ P
Sbjct: 461 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 520
Query: 208 SANVLLVGLRNLGRLSDV 225
S N ++ G G +S+
Sbjct: 521 SCNAMIKGYCQFGMMSEA 538
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + N+ +A K F E +E P+ +++ + + + EA+ + M+ C
Sbjct: 493 GFIRSENLGDARKIF-EFMEHKGVRPD-IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 550
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQ-LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P ++ + K + ++ L D+ I PN++ Y++++ C D D+
Sbjct: 551 IPDEFTYTTVISGYAKQGNLNGALRWLCDM---IKRKCKPNVVTYSSLINGYCKTGDTDS 607
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M P+ +TY ++ L K KV +F M+ N P
Sbjct: 608 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 657
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 1/205 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V Y + L +++EA+ + M+G C P ++ + + + ++
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+M G N PNL+ +N++V LC ++ + FD+MV G PD ++YN +
Sbjct: 69 SLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +HE F EM + P + + I A E A+ + + E G+ E
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ L+ G G L D EEM
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEM 212
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ +A +M ER E + + + + +D+AL + M+ P+
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ KL +L M + P+++ Y+ ++ C ++D+ F+
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEA--KRVKPDVVTYSTIISGYCKVGNLDSAFQL 278
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ G PD++TY+ + L + K++++ F M++ QP T I
Sbjct: 279 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 338
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
E A+ + + ++ G+LP + +VL+ GL R + R
Sbjct: 339 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EM E P+ V+ Y T + + +D A + + M +
Sbjct: 230 GYCKLGRMDLARELIREM-EAKRVKPD-VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 287
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P +S+ + L +LND+ +L++ M+ +G + P+ Y ++ C +V
Sbjct: 288 LPDAITYSSLIRGLCEEKRLNDAC---ELFENMLQLG--VQPDEFTYTTLIDGHCKEGNV 342
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ D+M+ G PD +TY+++ L K+ + E ++ + P P N
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED--PVPDN 396
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+ PN+ YN +V LC ++ M G P+++TYN + + ++
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 156 ENFFHEMI-KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
E M + +P + + + L A E A ++++ ++ G+ P S N LL
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
G +G L + EM R ++ VT L A
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 160
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV HG P+ TYN++ L ++ E +M P + T + A E
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 187 PEFAIEIWNYILENG-ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+ A + + + E G P + N ++ GL GR+ R+ +EM+ R L DV
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-REGLAPDV 116
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 138 GLCKEANLDRALYVLNGMIKSGCKPNVHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ L K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 196 SPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLD--PGVITYSMLMKGLCLDHKVERA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q+ G PD +N++ L K+ + + +M + ++ P ++ T +
Sbjct: 254 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEG 313
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++ ++
Sbjct: 314 FYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKTVLT 373
Query: 241 DV 242
+
Sbjct: 374 KI 375
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 21/223 (9%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F + +D++L L + + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGF-----------------CKNGYIDKSLHVLEMAEQKG 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + + + + M+ G PN+ +YN ++ L + ++
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCK--PNVHVYNTLINGLVGASKFED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + L K + E N E++ P + + +
Sbjct: 183 AIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L + E A+++WN + G P N+L+ GL ++G++
Sbjct: 243 GLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKM 285
>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
Length = 553
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R ++ D A + +R M P + +S + L + + D+M+ G PN
Sbjct: 150 RLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQ--PN 207
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
Y +V C + R + M+ G P + TYN++ E L K EV+
Sbjct: 208 AHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLE 267
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
E W P + ++ + L A + + + + +L NG+ P E + N+LL G+
Sbjct: 268 ESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSS 327
Query: 221 RLSDVRRF----AEEMLNRRILIYDVTMQKL 247
+R AE + ++ Y+ M+KL
Sbjct: 328 TAWAAKRLLECSAELGWDANVVNYNTVMRKL 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V EA M+E H Y + G ++ EA + L M
Sbjct: 182 GLCSAGQVAEALGVLDLMLEEGCQPNAHT--YTPIVHAYCTGGRIHEAKRLLNTMIASGF 239
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ ++ L K+ L + G+ P++I Y++ + LC +D
Sbjct: 240 APSTATYNVLVEALCKVGAFEEVDALLEESTAKGWT--PDVITYSSYMDGLCKAGRIDKS 297
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M+ +G P +T N++ + + ++ + + W +N T +
Sbjct: 298 FALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRK 357
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L D ++++ + + GI P + N+++ L LGRL
Sbjct: 358 LCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 399
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 8/215 (3%)
Query: 42 GKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
G D AL L M+ P F+ L + + + D M G + P+
Sbjct: 79 GAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVLDAMAADG--VAPD 136
Query: 101 LIMYNAVVGL-LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+VG+ C D + MV +G PD +TY+ + L +V E
Sbjct: 137 AAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVL 196
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M++ QP + A + N ++ +G P A+ NVL+ L +
Sbjct: 197 DLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKV 256
Query: 220 GRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
G +V EE + ++ Y M L KA
Sbjct: 257 GAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKA 291
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W P+ V+ Y +++ L + ++D++ + M P+ + LD + + + +
Sbjct: 274 WTPD-VITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 332
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L + +G++ N++ YN V+ LC+ + +V + F M G P+S T+N++
Sbjct: 333 KRLLECSAELGWD--ANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVV 390
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K ++H+ E+ T + T I L + E + ++E GI
Sbjct: 391 HSLCKLGRLHKALFLLRS---KEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIA 447
Query: 204 P 204
P
Sbjct: 448 P 448
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 39/249 (15%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGENCFPTLKFFSNALDILVKL 77
+ F P V ++ T L TL++ K+ D L F K P + + + L K
Sbjct: 196 IPSFGLQPS-VRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKK 254
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS- 136
ND +++ + M +GF +PN++ Y ++G + D+ R F +++ G PD
Sbjct: 255 NDIDAAIRVLEEMPAMGF--IPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPT 312
Query: 137 ----------------------------------LTYNMIFECLIKNKKVHEVENFFHEM 162
+TY +I E K KK EV N +M
Sbjct: 313 TYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDM 372
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ ++ P+ C I ML + + E A E+W +L+ P A + L+ L G++
Sbjct: 373 LEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKV 432
Query: 223 SDVRRFAEE 231
+ R+ +E
Sbjct: 433 WEARKLFDE 441
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G++V A + FGE+++R W P+ Y + + + +A+K + M+
Sbjct: 285 GYVSKGDMVGARRVFGEILDR-GWVPDPT-TYTILMDGYCKKGRFMDAVKVMDEMEENRV 342
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ K S + L D M+ + +P+ + V+ +LC V+
Sbjct: 343 EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKY--IPSSALCCRVIDMLCEEGKVEVA 400
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +++ PD+ + + L K KV E F E K P+ L I
Sbjct: 401 CELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAG 459
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + E A +W+ ++E G +P + N+L+ G +G + R EEML+ L
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519
Query: 241 DVT 243
T
Sbjct: 520 KAT 522
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 33 ETFLITLIR-----GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
E IT+IR G+ FLR+ P+++ F+ L+ LV+ N V L
Sbjct: 170 ENLFITVIRNYGFAGRPKLAIRTFLRI-PSFGLQPSVRSFNTLLNTLVQ-NKRFDLVHLM 227
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
F ++PN+ N +V LC ND+D R ++M G P+ +TY I +
Sbjct: 228 FKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYV 287
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA--DEPEF--AIEIWNYILENGIL 203
+ F E++ W P P T T+L+D + F A+++ + + EN +
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDP----TTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + V++ + +V ++ML ++ +
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLIKNKKVH 153
F L P++ +N ++ L N D V F G P+ T N++ + L K +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
EM + P + T + + + A ++ IL+ G +P + +L+
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
G GR D + +EM R+ DVT + +A+ E +S
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS 362
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 24/269 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KEG + +A ++ EM E +++ T + L R ++DEA ++ M
Sbjct: 621 GWCKEGMLDKAFSSYFEMTE--NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 61 FPTLKFF-------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
FP + F + I L++S T L+PN I+YN + LC
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADSLDESCKTF------------LLPNNIVYNIAIAGLCK 726
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
VD+ RFF + G PD+ TY + V E EM++ P +
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I L ++ + A +++ + + G+ P + N L+ G +G + + ++M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 234 NRRILIYDVTMQKLKKAFYNES---RSMR 259
I VT L RSM+
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMK 875
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+V A M E+ +V+ Y + + ++DEA K LR M+ E
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEK--GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 61 F-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + +D + V+L D M+ +G L NL + N+++ C ++
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG--LKTNLFICNSLINGYCKRGEIHE 385
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+MV PDS +YN + + + E N +M++ +PT L T +
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L + A++IW+ +++ G+ P E + LL GL
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 3/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + EA K M E P+ AY + R ++D+A++ L M
Sbjct: 305 GYCKQCKMDEAEKVLRGMQEEAALVPDE-RAYGVLIDGYCRTGKIDDAVRLLDEMLRLG- 362
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T F N+L H + I + +NL P+ YN ++ C
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAE-GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M+ G P LTYN + + L + + +H M+K P + +T +
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 481
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E A +W IL G + N ++ GL +G++ + ++M
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + L + +VD+A +F ++ + P + + + +L D
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G L+PN++ YNA++ LC + +VD R F ++ G FP+ +TYN + + K
Sbjct: 775 MLRRG--LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ +MI+ P+ + + I L + E ++++ N +++ G+
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G + + + + M
Sbjct: 893 CTLVQGYIRSGEMQKIHKLYDMM 915
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 5/174 (2%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L+P+ Y ++ C +D+ R D+M+ G + N + K ++HE E
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 387
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
M+ +P + T + A + + +L+ GI P + N LL GL
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+G D + M+ R + +V L + + F+ WK
Sbjct: 448 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK-----MENFEGASTLWK 496
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 34/231 (14%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ + T + L + ++ EA + MK C P + +D K ++ ++
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M + P++ MYN+++ L + + V +M G P+ +TY + + K
Sbjct: 568 MEREPIS--PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 625
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP----- 204
+ + + + EM +N + C+T ++ L + A + ++++G P
Sbjct: 626 GMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 685
Query: 205 ----------------LEASA-----------NVLLVGLRNLGRLSDVRRF 228
L+ S N+ + GL G++ D RRF
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 22/243 (9%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ F + V + + +V +Y + L RG+ DE +L N
Sbjct: 84 ASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL----------------NQ 127
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L L K D + + WD +VG+ + +++ ++ + N FD M
Sbjct: 128 LVDLCKFKDRGNVI--WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 185
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P + N + L+KN + H + +MI+ P + + + + A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR----FAEEMLNRRILIYDVTMQK 246
+ G+ P + + L+ G +LG + + +E+ ++R ++ Y + ++
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 247 LKK 249
K
Sbjct: 306 YCK 308
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ F L + V+ + + + ++D M G +P+L N+++ L N +
Sbjct: 156 PTV--FDMILKVYVEKGLTKNALYVFDNMGKCG--RIPSLRSCNSLLNNLVKNGETHTAH 211
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ QM+ G PD +++ K+ KV E F +M +P + + I
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + E A + ++ E G+ + +L+ G ++ + + M L+ D
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 331
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 2/229 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + T + L K D A++ MK + C P +S +D L + L
Sbjct: 368 VCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLK 427
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G N ++YN ++ LC + +++ FDQM G S+TYN + + L K
Sbjct: 428 EMESSG--CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
NK+V E +MI +P + +T + E A +I + NG P +
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
L+ GL GR+ + + + I++ + +A + R+
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 2/205 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + +L +++ EAL L+ M+ C ++ +D L K +++D M
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+G + + + YN ++ LC N V+ + DQM+ G PD TYN + +
Sbjct: 465 ELLGVSR--SSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + + M N +P T I L A + A ++ + GI+ + N
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 582
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNR 235
++ L R + R EM+ +
Sbjct: 583 PVIQALFMRKRTKEGMRLFREMMEK 607
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 14/230 (6%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
+V+EAL+F+ + E P F++ ++ ++ + + + D M+ GF+ P++
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD--PDVYT 300
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
YN+++ +C + + QM+ P+++TYN + L K ++ + ++
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
P T I L + + A+E++ + G P E + ++L+ L RL
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420
Query: 224 DVRRFAEEM----LNRRILIYDVTMQKLKKAFYNESRSMRDR---FDSLE 266
+ +EM R ++Y+ + L K SR + D FD +E
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCK-----SRRIEDAEEIFDQME 465
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 3/191 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L + K+V+EA + + M E P +++ L ++ D +
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G P++ Y ++G LC VD + + G YN + + L
Sbjct: 534 MASNGCE--PDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMR 591
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP-EFAIEIWNYILENGILPLEAS 208
K+ E F EM++ P L L + P + AI+ +LE GILP S
Sbjct: 592 KRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPS 651
Query: 209 ANVLLVGLRNL 219
L GL +L
Sbjct: 652 FGFLAEGLCSL 662
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 4/219 (1%)
Query: 33 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
ET L+ L + D L+ +K P F+ + ++ + +++ + +G
Sbjct: 59 ETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELG 118
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
P+ YN + L +N + V +MV G D T+N++ + L K ++
Sbjct: 119 ----FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQL 174
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
EM + +P + T + ++ + A+++ +L G L S VL
Sbjct: 175 RPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVL 234
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ G GR+ + RF E+ VT L F
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGF 273
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ + L L G Q +A+ + +MKG N + + LVK+ ++L++
Sbjct: 116 LVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFN 175
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M P+++ Y +++ C V+N FD MV G P+ + YN +
Sbjct: 176 SMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYAS 235
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
E F+ + KN +P ++ + + + +PE A E++N + +N P + S
Sbjct: 236 RGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVS 295
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
N L+ + G L + EM
Sbjct: 296 YNALIDAYGSAGMLKEAVGLLHEM 319
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 37/269 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA + F M ER P V+ Y + + + QV+ +M E P
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPN 222
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ L + +++++ G L P+++ Y +++ + +
Sbjct: 223 IVAYNSLLGAYASRGMHREALAIFNLIKKNG--LRPDIVSYTSLLNAYGRSAQPEKAREV 280
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT------- 176
F++M + P+ ++YN + + + E HEM K+ QP ++ +T
Sbjct: 281 FNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Query: 177 ----------------------------AITMLLDADEPEFAIEIWNYILENGILPLEAS 208
I L + E A+E++ + E+ + P +
Sbjct: 341 CRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVT 400
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N+L+ G LG+ ++ RF E+M++ ++
Sbjct: 401 YNILISGSSKLGKYTESLRFFEDMVDSKV 429
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGE--NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN 96
L++ Q EA++ M+ C P + +++ + + ++D+MV G
Sbjct: 161 LVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEG-- 218
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ PN++ YN+++G + F+ + +G PD ++Y + ++ + +
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
F++M KN +P ++ I A + A+ + + + ++GI P S + LL
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338
Query: 217 RNLGRLSDVRRFAEEMLNRRI 237
+++ + E +R I
Sbjct: 339 GRCRQITRIETILEAARSRGI 359
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 12/224 (5%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ + V +A F EM E + P+ + Y + + R Q A+ + M
Sbjct: 21 YARHNQVDQARGLFFEMQE-WRCKPDADI-YNSLIHAHSRAGQWRWAINIMEDMLRAAIP 78
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT ++N ++ + ++L M G+G P+L+ +N V+ L N
Sbjct: 79 PTRTTYNNVINACGAAGNWKKALELCKKMTENGVG----PDLVTHNIVLSALKNGAQYSK 134
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+F+ M D+ T N+I CL+K + E F+ M + P + T +
Sbjct: 135 AISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTS 193
Query: 180 MLLD---ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
++ + E I++ ++ G+ P + N LL + G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 3/178 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+ +AY + + + + ++AL+ M+ N P ++ + KL T +++ +
Sbjct: 362 NTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFF 421
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ MV + + Y++++ + F M G FPD LTY + +
Sbjct: 422 EDMVDSKVSSTKEV--YSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYN 479
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ F EM N P + C++ + EPE +++ ++ + I PL
Sbjct: 480 AGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSI-PL 536
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+Y ++ L +N VD F +M PD+ YN + + + N +M
Sbjct: 13 IYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDM 72
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ PT I A + A+E+ + ENG+ P + N++L L+N +
Sbjct: 73 LRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQY 132
Query: 223 SDVRRFAEEM 232
S + E M
Sbjct: 133 SKAISYFEIM 142
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 6/228 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L +V +AL + M E P + ++ L K+ D+ + L
Sbjct: 10 VVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLS 65
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M ++ ++++YNA++ LC + + F +M G FPD +TY+ + + +
Sbjct: 66 KMEET--HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + + E +MI+ + P + + I L+ + A EI+ +L GI P +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N ++ G RL+D +R + M ++ VT L + R
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 3/244 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + L + A M + FP + +S +D + T QL
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ N P+++ ++A++ L V + M+ G FP ++TYN + +
Sbjct: 135 RDMIERQIN--PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K ++++ + M P + +T I A + +EI+ + GI+
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
+ L+ G +G L + M++ + +T Q + + ++ + +R F LE
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK-KELRKAFAILED 311
Query: 268 RWKT 271
K+
Sbjct: 312 LQKS 315
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA + +G+M+ R + + Y + + + ++++A + L M ++C P
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPT--TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS ++ K + ++++ M G ++ N + Y ++ C D+D
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRG--IVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
+ M+ G P+ +T+ + L K++ + ++ K+E
Sbjct: 274 LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T L L + + A+KFLR+++ + + ++ +D L K +
Sbjct: 158 VSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSE 217
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G + PN+I Y ++G C + F ++M+ P+ TY ++ + L K
Sbjct: 218 MNARG--IFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKE 275
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPL 205
KV E +N EM ++ P + T T LLD + A ++ + E GI P
Sbjct: 276 GKVKEAKNLLAEM---HYRGQPADVVT-YTSLLDGFCKNQNLDKATALFMKMKEWGIQPN 331
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI----YDVTMQKL-KKAFYNESRSMRD 260
+ + L+ GL GRL D ++ +++L + I Y+V + L K+ +E+ +++
Sbjct: 332 KYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKS 391
Query: 261 RFD 263
+ +
Sbjct: 392 KME 394
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 10/163 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V EA EM + P V+ Y + L + + +D+A MK P
Sbjct: 274 KEGKVKEAKNLLAEM--HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPN 331
Query: 64 LKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ +D L K L D+ Q D++V ++ YN ++G LC +D
Sbjct: 332 KYTYTALIDGLCKGGRLKDAQKLFQ--DLLVK---GCCIDVCTYNVMIGGLCKEGMLDEA 386
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+M +G P+ +T+ +I L K + + E HEMI
Sbjct: 387 LAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMI 429
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 11/242 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y T + L + K V+EA F M FP + ++ + T L
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M I N+ PN+ Y ++ LC V +M + G D +TY + +
Sbjct: 251 NEM--ILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFC 308
Query: 148 KNKKVHEVENFFHEMIKNEW--QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
KN+ + + F +M EW QP I L + A +++ +L G
Sbjct: 309 KNQNLDKATALFMKM--KEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCID 366
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSL 265
+ NV++ GL G L + +M + + VT + + ++ + +D D
Sbjct: 367 VCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFK-----KDENDKA 421
Query: 266 ER 267
E+
Sbjct: 422 EK 423
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
+V D +V GF + N + Y ++ LC + +F + + + YN I
Sbjct: 141 SVHFHDKVVAQGFQM--NQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTI 198
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K+K V+E +F+ EM P + T I A + A + N ++ I
Sbjct: 199 IDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNI 258
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
P + +L+ L G++ + + EM R
Sbjct: 259 NPNVYTYAILIDALCKEGKVKEAKNLLAEMHYR 291
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + A G MVE + + Y T + + + A + + M+ E
Sbjct: 335 GYCKEGKLARAEMLLGRMVE--QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGF 392
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K ++ + G L + + Y ++ C +
Sbjct: 393 QPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQL--DKVTYTVMITEHCKQGHITYA 450
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M +G PD TY + + +++ E + F + + E PT + I
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A+ ++ +++NG + L+ GL RL + R E ML++R++
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570
Query: 241 DVT 243
+VT
Sbjct: 571 EVT 573
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 4/211 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G+ A K F MV R P+ ++ ++ R +++E L VM+G+
Sbjct: 163 GSFAYARKVFDGMVTRGGLLPD-ARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNA 221
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + + + +L+ M+ +G PN++ Y A + LC V F +
Sbjct: 222 TCTVIVRVFCQKGRFRDVSELFRRMLEMGTP--PNVVNYTAWIDGLCKRAYVKQAFYVLE 279
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK-NEWQPTPLNCATAITMLLDA 184
+MV G P+ T+ + L K F ++IK + ++P I
Sbjct: 280 EMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKE 339
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ A + ++E G+ P + L+ G
Sbjct: 340 GKLARAEMLLGRMVEQGLAPNTNTYTTLISG 370
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 102/273 (37%), Gaps = 39/273 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +EG + EA EMV+R ++ Y + ++ K L+ M
Sbjct: 621 GFCREGKLEEALSVCQEMVQR--GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K D +WD+M+ G +PN + Y AV+ LC V+
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG--CVPNEVTYTAVINGLCKAGFVNEA 736
Query: 121 FRFFDQM---------VFHGAFPDSLT--------------------------YNMIFEC 145
+M V +G F D LT YNM+
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ ++ E MI + P + T I L ++ + AIE+WN + E GI P
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ N L+ G G + EML + ++
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 40 IRGKQV-DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
+R ++V D L F ++ + P ++ S L LVK ++L++ MV +G +
Sbjct: 167 VRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG--IR 224
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +Y V+ LC D+ M G + + YN++ + L K +KV E
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
++ + +P + T + L E E +E+ + +L P EA+ + L+ GLR
Sbjct: 285 KKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRK 344
Query: 219 LGRLSD----VRRFAEEMLNRRILIYDVTMQKLKKAF-YNESRSMRDRFDSLERR 268
G++ + V+R + ++ + +Y+ + L K ++E+ + DR + R
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 2/229 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y + L + ++V EA+ + + G++ P + + + L K+ + +++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D M+ + F+ P+ +++V L ++ ++V G P+ YN + + L
Sbjct: 321 DEMLCLRFS--PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K +K HE E F M K +P + + I M + + A+ +++ G+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N L+ G G +S F EM+N+++ VT L + ++ +
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 16/234 (6%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y + R ++D AL FL GE LK + L+ + + DI
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFL----GEMVDTGLKLSVYPYNSLINGH-----CKFGDI 453
Query: 90 MVGIGF-------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
GF L P ++ Y +++G C+ ++ R + +M G P T+ +
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
L + + + F+EM + +P + I + + A E + E GI
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+P S L+ GL G+ S+ + F + + + ++ L F E +
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 8/209 (3%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y L R +++EAL + M L + +D +K D L
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G L P+ ++Y +++ D F +D M+ G P+ +TY + L K
Sbjct: 673 MHDRG--LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD-EPEFAIEIWNYILENGILPLEAS 208
V+E E +M P + + +L + + + A+E+ N IL+ G+L A+
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTAT 789
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N+L+ G GR+ + A E++ R I
Sbjct: 790 YNMLIRGFCRQGRIEE----ASELITRMI 814
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Query: 7 NVVEANKTFGEMVERFE-WN--------PEHVLAYETFLITLIRGKQVDEALKFLRVMKG 57
++++A G+ E F W+ P V Y + L + V+EA M+
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 58 ENCFPTLKFFSNALDILVKLN-DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P + LDIL K D V+L + ++ L+ N YN ++ C
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK---GLLANTATYNMLIRGFCRQGR 802
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
++ +M+ G PD +TY + L + V + ++ M + +P + T
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 177 AITMLLDADEPEFAIEIWNYILENGILP 204
I A E A E+ N +L G++P
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 87/234 (37%), Gaps = 8/234 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 58
G + G + +A K F EM E WN P V Y + + +A +FL+ M +
Sbjct: 516 GLFRAGLIRDAVKLFNEMAE---WNVKPNRV-TYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + + L ++ D + L N I Y ++ C ++
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL--NEICYTGLLHGFCREGKLE 629
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+MV G D + Y ++ + +K+K EM +P + + I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A IW+ ++ G +P E + ++ GL G +++ +M
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
>gi|302810233|ref|XP_002986808.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
gi|300145462|gb|EFJ12138.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
Length = 587
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 9/204 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K N+ EA + F E+ + +++Y + + + + + + G+
Sbjct: 384 GLLKLNNLSEAARLFSEI------DKPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGL 437
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ L L LW M+ G + P++ Y ++ LC +N +
Sbjct: 438 RPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVS--PSVATYTILIHALCRDNRLQAA 495
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M G PD++TYN + CL KN+ + E EM K TP I
Sbjct: 496 RQIIDKMKGQGVLPDAITYNTLLHCLCKNELLDEAHLLLREM-KQHCSYTPATWNIVIDG 554
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
+L+ + A I++ ++ +G P
Sbjct: 555 ILEQRDLGVAQRIFSQLIRDGFFP 578
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + + + EM R + H LA+ + + L + + DEA L + C
Sbjct: 110 GCCRSGRLDTCVEIYQEMRSR-GFRVSH-LAFNSLVCGLCKAGRTDEAWDVLGKSRPSAC 167
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ S + L +D ++L M + PN++ Y +V+ LC D
Sbjct: 168 ADAVTL-STVIHALCS-SDCDRALELMRAMQA--QRVPPNVVTYTSVIDGLCKAGRRDAA 223
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
QM G P+++TYN + L K K+ + M P+
Sbjct: 224 MVLLQQMQAAGCSPNTVTYNCLIHSLCKAGKLEDAFALLRSMPSKGCTPS 273
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 33/257 (12%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL------------------------ 64
+ Y + +L + ++++A LR M + C P++
Sbjct: 239 TVTYNCLIHSLCKAGKLEDAFALLRSMPSKGCTPSINNKNTLVSGICKHAIMERQRREFG 298
Query: 65 ----KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNL-MPNLIMYNAVVGLLCNNNDVDN 119
FS A+ + + T + + G N P+ Y+ V+ LC + V
Sbjct: 299 KLGQALFSEAMQESCSVEEDTLALLYTCLEHMFGSNGDRPDKRTYSIVIHFLCKADKVLE 358
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R + MV D++TYN L+K + E F E+ K PT ++ + +
Sbjct: 359 AARVWRAMVKRLGQADAVTYNSFLYGLLKLNNLSEAARLFSEIDK----PTLVSYSLLVH 414
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
A + E++ G+ P A N++L GL + + V EMLN +
Sbjct: 415 AYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVSP 474
Query: 240 YDVTMQKLKKAFYNESR 256
T L A ++R
Sbjct: 475 SVATYTILIHALCRDNR 491
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 85/248 (34%), Gaps = 33/248 (13%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
+ +I + D AL+ +R M+ + P + +++ +D L K + L M
Sbjct: 174 STVIHALCSSDCDRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDAAMVLLQQMQAA 233
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G + PN + YN ++ LC +++ F M G P N + + K+ +
Sbjct: 234 GCS--PNTVTYNCLIHSLCKAGKLEDAFALLRSMPSKGCTPSINNKNTLVSGICKHAIME 291
Query: 154 EVENFF-------------------------------HEMIKNEWQPTPLNCATAITMLL 182
F H N +P + I L
Sbjct: 292 RQRREFGKLGQALFSEAMQESCSVEEDTLALLYTCLEHMFGSNGDRPDKRTYSIVIHFLC 351
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
AD+ A +W +++ + N L GL L LS+ R E+ ++ Y +
Sbjct: 352 KADKVLEAARVWRAMVKRLGQADAVTYNSFLYGLLKLNNLSEAARLFSEIDKPTLVSYSL 411
Query: 243 TMQKLKKA 250
+ KA
Sbjct: 412 LVHAYFKA 419
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + +V EA + R M +++ L L+KLN+ + +L+ +
Sbjct: 343 YSIVIHFLCKADKVLEAARVWRAMVKRLGQADAVTYNSFLYGLLKLNNLSEAARLFSEID 402
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
P L+ Y+ +V D+ V + G PD YN++ L K+
Sbjct: 403 ------KPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHGLSGAKQ 456
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + + EM+ N P+ I L + + A +I + + G+LP + N
Sbjct: 457 EAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPDAITYNT 516
Query: 212 LL 213
LL
Sbjct: 517 LL 518
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 75/187 (40%), Gaps = 8/187 (4%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L K + ++W MV +G + + YN+ + L N++
Sbjct: 338 PDKRTYSIVIHFLCKADKVLEAARVWRAMVKRLG---QADAVTYNSFLYGLLKLNNLSEA 394
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R F ++ P ++Y+++ K + +VE + +P +
Sbjct: 395 ARLFSEI----DKPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQGLRPDLALYNIVLHG 450
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A + +W +L NG+ P A+ +L+ L RL R+ ++M + +L
Sbjct: 451 LSGAKQEAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPD 510
Query: 241 DVTMQKL 247
+T L
Sbjct: 511 AITYNTL 517
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 16/250 (6%)
Query: 22 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
F++N ++Y T + L + + AL LR + G+ P + +S +D + K
Sbjct: 188 FQFNQ---ISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
L+ MV G + PN++ Y+A++ + + F++M+ PD T+N+
Sbjct: 245 DAFDLYSEMVSKGIS--PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNI 302
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ + K+ K+ EM P + ++ + L + A+ + + + G
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQK--------LKKAFYN 253
I P + +L+ GL G+L D R E++L + YD+T+ KK ++
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG---YDITVVTYIVMFYGFCKKGLFD 419
Query: 254 ESRSMRDRFD 263
E+ ++ + +
Sbjct: 420 EASALLSKME 429
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 95 FNLMP------NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
FN +P NLI Y++ +NNDVD+ F+ ++ P ++ +N I L+K
Sbjct: 40 FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+K H V +M +P +NC I FA ++ IL+ G P +
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEML 233
L+ GL G++ F ++++
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLV 184
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
++ Y + T VD+A+ + +N P F+ L LVK + L
Sbjct: 52 LIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSK 111
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PNL+ N ++ C + F F +++ G P+++T+ + + L
Sbjct: 112 KMEFRG--IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCL 169
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++H+ NF +++ +Q ++ T I L E A+++ + + P
Sbjct: 170 KGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVM 229
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFD 263
+ ++ G+ ++D EM+++ I VT L F+ + ++D D
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGK-LKDAVD 283
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A K EM +R P +++ Y + L L + +VD+A+ L +K + P
Sbjct: 309 KSGKISYALKLVDEMHDR--GQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366
Query: 64 LKFFSNALDILV---KLNDSTHTVQLWDIMV-GIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+ ++ +D L KL D+ + + D++V G ++ ++M+ C D
Sbjct: 367 MHTYTILIDGLCTSGKLEDARNIFE--DLLVKGYDITVVTYIVMFYG----FCKKGLFDE 420
Query: 120 VFRFFDQMVFHGAFPDSLTYNMI 142
+M +G PD+ TY +I
Sbjct: 421 ASALLSKMEENGCIPDAKTYELI 443
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A F +M+ P+ V + + + ++ ALK + M
Sbjct: 271 GFFTVGKLKDAVDLFNKMISE-NIKPD-VYTFNILVDVFCKSGKISYALKLVDEMHDRGQ 328
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ LD L K + V L + G + PN+ Y ++ LC + +++
Sbjct: 329 PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG--IRPNMHTYTILIDGLCTSGKLEDA 386
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F+ ++ G +TY ++F K E +M +N P
Sbjct: 387 RNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIP 435
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 137 KDGDIRJAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 194
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 195 VYTYSVLINGXCKESKXDDANELFDEMLVKG--LVPNXVXFTTLIDGHCKNGRVDLAMEI 252
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P + T I
Sbjct: 253 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCK 312
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ E L+ GL GR D + EML+
Sbjct: 313 EGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLS 363
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 103 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG--LRPSV 160
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D+D FR M+ G PD TY+++ K K + F E
Sbjct: 161 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDE 220
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 221 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 280
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 281 LKQAHHLIDEM 291
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 39/291 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K V EA F EM ER P ++ T ++ L + ++D+A + M+ ++
Sbjct: 124 GLCKSSRVEEALLLFNEM-ERLGCTPNR-RSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLL-------- 111
P + +D L K +L+ M+ G + P+ + YN V+ G+
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG--ITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 112 --------------------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
C +D FR +M G PD +TY+ +
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +V + + +M+K + +PT + T I L A + A E+ + ++ +G P
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ G G+ R +M+ R + VT L +R
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + +A F +++ P V AY + + L D+A + M C
Sbjct: 19 GLAKAGKLNDARNLFQKLLHS-GVTPSTV-AYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ +D K L M+ G +P+++ YN V+ LC ++ V+
Sbjct: 77 PPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVMDGLCKSSRVEEA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F++M G P+ ++N I L + K+ + FHEM + P + I
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L A + A +++ +L++GI P + NV++ G+
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA K F M++ P V Y + + +DEAL+ + M+ + C
Sbjct: 194 GLAKAGKLNEAYKLFQRMLDS-GITPSAV-TYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ F+ +D K +L M G +P+++ Y+ ++ LC+ VD+
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH--VPDVVTYSTLISGLCSIARVDDA 309
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ MV P +T N + L K ++ E M+ + P + T +
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
A + E A E+ + ++ G+ P + L+ GL RL +
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F +M R P + Y + + ++EA ++ M + P + ++
Sbjct: 63 DARELFADMNRR--GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K + + L++ M +G PN +N ++ LC + +D + F +M
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCT--PNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
PDS +Y ++ + L K K++E F M+ + P+ + I + A +
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A+E++ + G P + N+L+ G+L + R + M +
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 102/285 (35%), Gaps = 56/285 (19%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + MV + +P+ V+ Y T + R Q + A + L M
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQ-SPD-VVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L K N ++ M G PNL Y A++ C+ VD
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSG--CAPNLFTYTALILGFCSAGQVDGG 449
Query: 121 FRFFDQMVFHGAFPDSLTYNMI-------------------------------------F 143
+ F +MV G PD + Y +
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 509
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
+ L++ K+ F +M++ P P CA+ + L + + A + I++
Sbjct: 510 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD---- 565
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLK 248
L G + G+ + +F EEM+ + I D + LK
Sbjct: 566 --------LAYGGKARGKAA---KFVEEMVGKGYEIEDAVLGPLK 599
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 9/222 (4%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFS---NALDILVKLNDSTHTVQLWDIMVGIGFNL 97
RGK +DEA + L+ M + P + +S + L + +++D+ H L + MV
Sbjct: 268 RGK-LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH---LLEDMVK--RQC 321
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
P ++ N ++ LC + D MV G PD +TYN + + +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+M+ P + ++ L A+ A ++ + +G P + L++G
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMR 259
+ G++ + EM+ I V L RS R
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + YN ++ C ++ +M+ G PD +TYN + + L K+ +V E
Sbjct: 78 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F+EM + P + T I L + + A ++++ + I P S +L+ GL
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVT 243
G+L++ + + ML+ I VT
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVT 222
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 76 KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD 135
KLND+ + Q + + P+ + Y +++ LC N D+ F M G P
Sbjct: 25 KLNDARNLFQKL-----LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79
Query: 136 SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWN 195
+TYN++ + K + E + +MI++ P + T + L + E A+ ++N
Sbjct: 80 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 139
Query: 196 YILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
+ G P S N +++GL ++ + EM + I Y + + L KA
Sbjct: 140 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/137 (18%), Positives = 54/137 (39%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
N+ P+ Y ++ L +++ F +++ G P ++ Y + L +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
F +M + P+P+ I E A ++ ++E+G +P + N ++ G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 216 LRNLGRLSDVRRFAEEM 232
L R+ + EM
Sbjct: 125 LCKSSRVEEALLLFNEM 141
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A K F EM++R +V Y L +L ++DEA++ L MK + C
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIM--PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGC 273
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L L K+ Q ++ GF L L Y+ ++ L D
Sbjct: 274 LPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL--GLKGYSCLIDGLFQARRFDEG 331
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M+ PD + Y ++ + ++ + +F M K + P T + +
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + E A + + +L+N ++ + +++ GL G + + + +EM
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451
Query: 241 DVTMQKLKKAFYNESR 256
+T L FY E R
Sbjct: 452 VMTYNALIDGFYREGR 467
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 4/230 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
G +A + F M E F+ P Y T L L+ + AL M C P
Sbjct: 148 SSAGRHADAVQAFSRMDE-FQSRPT-AFVYNTILKALVDSGVILLALALYNRMVAAGCAP 205
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +D L K + ++++D M+ G +MPN+ +Y ++ LCN +D +
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRG--IMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +TYN L K +V+E + + + I L
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + + +LE I P +++ G GR+ D F + M
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
+ M+ER +P+ VL Y + ++++AL FL VMK + P ++ L +L
Sbjct: 335 YKTMLER-NISPDVVL-YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
D L M + NL+ + ++ LC VD + FD+M HG P
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDP 450
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEM 162
+TYN + + + ++ E FH+M
Sbjct: 451 TVMTYNALIDGFYREGRLEEARMLFHKM 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGEN 59
G K G V EA + F EM E +P V+ Y + R +++EA + F ++ G N
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEH-GCDPT-VMTYNALIDGFYREGRLEEARMLFHKMEMGNN 483
Query: 60 --CFPTLKFFSNAL-------DILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVG 109
F L +N + ++ + S ++ + ++ I ++P+++ YN ++
Sbjct: 484 PSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC ++D R F ++ G PD +TY + + L++ + ++ F ++++ P
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSP 603
Query: 170 TPLNCATAITMLLDADEPEFAIEIW-NYILENGILPLEA 207
+ + + L + AI +W +Y+ + P+E+
Sbjct: 604 SLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 33 ETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK---LNDST---HTVQ 85
+T +I L + VDEA++ M C PT+ ++ +D + L ++ H ++
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 86 LWD-----IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ + + + +G N + + +V +C + V ++ ++ G PD +TYN
Sbjct: 480 MGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K + + F E+ P + T I LL A A+ ++ IL++
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS 599
Query: 201 GILPLEASANVLLVGLRNLGRLS 223
G P + N ++ L + +LS
Sbjct: 600 GSSPSLSIYNSMMRSLCRMKKLS 622
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + + +PT T + L+D+ A+ ++N ++ G P A+ NVL+ GL
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
G D + +EML+R I+ IY V + L A
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 7/246 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + + R + P V+ + + + +++D+AL+ M NC L+
Sbjct: 367 GKLDEAEELLNGAIAR-GFTPT-VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQ 424
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ +++L+K + + M G L PN+++Y +++ C V F
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANG--LAPNVVIYTSIIDGYCKVGMVGAALEVFK 482
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G P++ TY + LI++KK+H+ +M ++ P + T I
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
E + A ++ + +NG+ P E + NVL L GR + F ++ + +++ VT
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYT 599
Query: 246 KLKKAF 251
L F
Sbjct: 600 SLVDGF 605
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 6/204 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM+E+ P+ AY L + + +EA FL V KG T +++ +D K
Sbjct: 552 EMMEKNGLTPDEQ-AYNVLTDALCKSGRAEEAYSFL-VRKG--VVLTKVTYTSLVDGFSK 607
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
++ L + MV G +L Y+ ++ LC ++ DQM G +
Sbjct: 608 AGNTDFAAVLIEKMVNEGCK--ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ Y +I +IK K ++ F+EMI + +P+ I+ + E A +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725
Query: 197 ILENGILPLEASANVLLVGLRNLG 220
+ +G+ P + ++ + G ++G
Sbjct: 726 MERDGVTPDVVTYHIFINGCGHMG 749
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 106/273 (38%), Gaps = 20/273 (7%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + EA GEM ER P+ V+ Y F+ +D A L+ M +C
Sbjct: 710 YCKIGQIEEAEHLIGEM-ERDGVTPD-VVTYHIFINGCGHMGYMDRAFSTLKRMVDASCE 767
Query: 62 PT-------LKFFSNALDILVKLNDST--------HTV-QLWDIMVGIGFNLMPNLIMYN 105
P LK F I D++ +TV QL + M+ G N P ++ Y+
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLN--PTVVTYS 825
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+++ C ++ D M+ P+ Y M+ +C K + +F +MI+
Sbjct: 826 SIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEF 885
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+QP + I L D + + A ++ +L E + +L GL G +
Sbjct: 886 GFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFC 945
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
+ M NR I + L + S S+
Sbjct: 946 SQLLAAMDNRHCRIDSESYSMLTDSIREASGSV 978
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 13/251 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A EM R V Y + + ++ +AL +M+ C
Sbjct: 293 GLCKEGRIHDARGLLDEMPLR--GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350
Query: 61 FPTLKFFSNALDILV--KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P +++ + L KL+++ +L + + GF P +I + ++ C +D
Sbjct: 351 NPDDWTYNSLIYGLCGGKLDEAE---ELLNGAIARGFT--PTVITFTNLINGYCKAERID 405
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ R M+ D Y ++ LIK ++ E + +EM N P + + I
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSII 465
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLN 234
A+E++ + G P + L+ GL +L + + E+ +
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525
Query: 235 RRILIYDVTMQ 245
++ Y +Q
Sbjct: 526 PGVIAYTTLIQ 536
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+MV G +L NL MY ++ LC + + D+M G P TYN + + K
Sbjct: 274 MMVQDGCSL--NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCK 331
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA--DEPEFAIEIWNYILENGILPLE 206
+ ++ + M +N P + I L DE E E+ N + G P
Sbjct: 332 SGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE---ELLNGAIARGFTPTV 388
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ L+ G R+ D R M++
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMIS 416
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 4/239 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ V +A F M R +V +Y + + K VDEA+K + M +
Sbjct: 447 GYCLVNEVNKAESIFNTMSHR--GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +S+ +D L K ++ ++L D M G P++I YN+++ LC + VD
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRG--QQPDIITYNSILDALCKKHHVDKA 562
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ G PD TY ++ + L ++ K+ + F +++ + I
Sbjct: 563 ITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 622
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
D + A+ + + + ENG +P + ++++ L + EM+ R +L+
Sbjct: 623 FCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLV 681
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A F +M + P+ V + + + + EA L +M ++
Sbjct: 377 GFCIVGKLKDAIDLFNKMTSK-NIIPD-VYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI 434
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S+ +D +N+ +++ M G + N+ YN ++ C VD
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG--VTANVQSYNIMINGFCKIKMVDEA 492
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M FPD +TY+ + + L K+ ++ EM QP + + +
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML----NRR 236
L + AI + + GI P + +L+ GL G+L D R+ E++L N
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612
Query: 237 ILIYDVTMQKL-KKAFYNESRSMRDRFD 263
+ Y V +Q K ++E+ ++ + +
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKME 640
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 97/228 (42%), Gaps = 4/228 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T + L + + AL+ LR G+ P + ++ +D + K H +D+
Sbjct: 299 VSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCK---DKHVNDAFDL 355
Query: 90 MV-GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ + P++ YNA++ C + + F++M PD T++++ + K
Sbjct: 356 YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + E +N M+K +P + ++ + +E A I+N + G+ S
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N+++ G + + + + +EM +++I +T L R
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
>gi|224102855|ref|XP_002312829.1| predicted protein [Populus trichocarpa]
gi|222849237|gb|EEE86784.1| predicted protein [Populus trichocarpa]
Length = 734
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
+ R + N +V A ++ L + + AL + + C P L F++ + L +
Sbjct: 375 IARIDLNLCNV-AGSIYVSALCEDGKTETALACFKNVASAGCIPLLFTFNSLIKRLFQDG 433
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
L DIM G ++PNL Y +V C D+ + F DQM G P
Sbjct: 434 LFEDVKSLMDIMQNEG--IVPNLETYLIMVNEYCKQEDLASAFGILDQMKEMGPKPSVAI 491
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
Y+ I CL + +++ E E FH M ++ P + T I + A+ ++ ++
Sbjct: 492 YDCIIACLSQQRRISEAETLFHRMRRDGLDPDEVAYMTMINAYARDGRGDKALNLFEKMI 551
Query: 199 ENGILPLEASANVLLVG 215
EN I P S L+ G
Sbjct: 552 ENAIQPSSYSYTSLISG 568
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 44/239 (18%)
Query: 15 FGEMVERFEWNPEHVLAYET---------FLITLIRGKQVDEALK-FLRVMKGENC---- 60
GE + E+ +HV+A T +I L + ++D+A++ F R++ ++C
Sbjct: 103 LGEPLSAHEFYRDHVIARGTEPDSNIVNSMIICLAKLGKLDDAVRLFDRLIGSDDCVLSN 162
Query: 61 ---------FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG--------------FNL 97
F F A D LV+++D+ + +W V I F++
Sbjct: 163 AACIMILEGFYEQDRFLEAFDYLVRISDANVKLGMWVYTVLINGLCHQRYVGEAIQVFDI 222
Query: 98 M-------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
M P L M+ + LC + F++M G F D + Y + KNK
Sbjct: 223 MCKRTGSPPTLHMFKTLFFGLCKAGWLVEAELVFEEMEVQGFFVDKVMYTSLMNAHGKNK 282
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
K+ + M+K P T I L + A +W+ + ++GI P EA A
Sbjct: 283 KMKMAMRVYFRMLKKGCDPDICTYNTLIHGFLKMGLFDKAWALWSLMSDSGIQPNEAIA 341
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G +A K F EM++R +V Y L +L ++DEA++ L MK + C
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIM--PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGC 273
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ L L K+ Q ++ GF L L Y+ ++ L D
Sbjct: 274 LPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL--GLKGYSCLIDGLFQARRFDEG 331
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F ++ M+ PD + Y ++ + ++ + +F M K + P T + +
Sbjct: 332 FGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKV 391
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L D + E A + + +L+N ++ + +++ GL G + + + +EM
Sbjct: 392 LCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPT 451
Query: 241 DVTMQKLKKAFYNESR 256
+T L FY E R
Sbjct: 452 VMTYNALIDGFYREGR 467
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 4/230 (1%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
G +A + F M E F+ P Y T L L+ + AL M C P
Sbjct: 148 SSAGRHADAVQAFSRMDE-FQSRPT-AFVYNTILKALVDSGVILLALALYNRMVAAGCAP 205
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
++ +D L K + ++++D M+ G +MPN+ +Y ++ LCN +D +
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRG--IMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +TYN L K +V+E + + + I L
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A + + +LE I P +++ G GR+ D F + M
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 17/255 (6%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
+ M+ER +P+ VL Y + ++++AL FL VMK + P ++ L +L
Sbjct: 335 YKTMLER-NISPDVVL-YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
D L M + NL+ + ++ LC VD + FD+M HG P
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDP 450
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE------ 188
+TYN + + + ++ E FH+M L + D++
Sbjct: 451 TVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDM 510
Query: 189 -------FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A ++ I+++G++P + N L+ GL L R +E+ + I +
Sbjct: 511 CQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE 570
Query: 242 VTMQKLKKAFYNESR 256
+T L R
Sbjct: 571 ITYGTLIDGLLRAHR 585
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGEN 59
G K G V EA + F EM E +P V+ Y + R +++EA + F ++ G N
Sbjct: 426 GLCKRGLVDEAMQIFDEMGEH-GCDPT-VMTYNALIDGFYREGRLEEARMLFHKMEMGNN 483
Query: 60 --CFPTLKFFSNAL-------DILVKLNDSTHTVQLWDIMVGI-GFNLMPNLIMYNAVVG 109
F L +N + ++ + S ++ + ++ I ++P+++ YN ++
Sbjct: 484 PSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC ++D R F ++ G PD +TY + + L++ + ++ F ++++ P
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSP 603
Query: 170 TPLNCATAITMLLDADEPEFAIEIW-NYILENGILPLEA 207
+ + + L + AI +W +Y+ + P+E+
Sbjct: 604 SLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
Query: 33 ETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM- 90
+T +I L + VDEA++ M C PT+ ++ +D + L+ M
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 91 ----------VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
+ +G N + + +V +C + V ++ ++ G PD +TYN
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L K + + F E+ P + T I LL A A+ ++ IL++
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS 599
Query: 201 GILPLEASANVLLVGLRNLGRLS 223
G P + N ++ L + +LS
Sbjct: 600 GSSPSLSIYNSMMRSLCRMKKLS 622
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + + +PT T + L+D+ A+ ++N ++ G P A+ NVL+ GL
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219
Query: 219 LGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA 250
G D + +EML+R I+ IY V + L A
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255
>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 2/229 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E + Y + L + ++++L L + + + +S ++ L K + V +
Sbjct: 92 EDSITYGILVHGLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSV 151
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M+ G MPN +YNA++ L + ++ R F +M P +TYN + L
Sbjct: 152 LNGMIKXG--CMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGL 209
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ E + EM++ W P + + I L + E A+ +WN ++ G P
Sbjct: 210 CKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDV 269
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N+L+ GL ++G+ +M VT L + FY +
Sbjct: 270 QMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFYKDG 318
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 10/216 (4%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L+ + ++A++ + M +C PT+ ++ ++ L K L M+
Sbjct: 167 YNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEML 226
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G+N P +I Y+ ++ LC V+ ++Q++ G PD +N++ L K
Sbjct: 227 EKGWN--PCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGK 284
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITML----LDADEPEFAIEIWNYILENGILPLEA 207
+ + +M N W P N T T++ D D A+ W IL NG+ P
Sbjct: 285 TQLALSLYFDM--NRWNCAP-NLVTHNTLMZGFYKDGDIRN-ALATWARILRNGVQPDII 340
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
S N+ L GL + R+S F + L ++I +T
Sbjct: 341 SYNITLKGLCSCNRISGAILFLHDALTKKIFPTIIT 376
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA EM+E+ WNP V+ Y + L G++V+ AL + + P ++ +
Sbjct: 217 EAYDLVKEMLEK-GWNP-CVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNI 274
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + + + L+ M +N PNL+ +N ++ + D+ N + +++
Sbjct: 275 LIHGLCSVGKTQLALSLYFDMNR--WNCAPNLVTHNTLMZGFYKDGDIRNALATWARILR 332
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+G PD ++YN+ + L ++ F H+ + + PT
Sbjct: 333 NGVQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIFPT 373
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 13/196 (6%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P ++ L+ K+ +LW++M G N+ +N ++ L +N V+ V
Sbjct: 23 PDAVVYNAMLNGFFKVGRIKDCFELWELM---GKEGGRNVASFNIMMRGLFDNGKVNEVI 79
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC---ATAI 178
++ M G DS+TY ++ L KN ++ H + E + L+ + I
Sbjct: 80 SIWELMKKSGFVEDSITYGILVHGLCKNG---DINKSLHMLEIAEVKGGVLDAFAYSAMI 136
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-- 236
L + + A+ + N +++ G +P N L+ GL + D R +EM N
Sbjct: 137 NWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCS 196
Query: 237 --ILIYDVTMQKLKKA 250
I+ Y+ + L KA
Sbjct: 197 PTIITYNTLINGLCKA 212
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA F +M ER + P +V Y + + L + K++D ALK L M +C
Sbjct: 680 GFCKVGKLDEAQMVFTKMSER-GYGP-NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G + PN++ Y A++ VD
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH--PNVVTYTAMIDGFGKAGKVDKC 795
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G P+ +TY ++ + + EM + W P +
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYW-PKHM---AGYRK 851
Query: 181 LLDADEPEFAIEIW--NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+++ EF I + + I EN +P+ + +L+ GRL +EM
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EMV + +V+ Y + ++ +++ A + +M E C P
Sbjct: 527 KVGLLQQARKWFDEMVR--DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ ++ +D K Q++ M G + F + PN+ Y A+V
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + V D M G P+ + Y+ + + K K+ E + F +M + + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
++ I L + A+++ + +LEN P ++ GL +G+ + R
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 230 EEM 232
M
Sbjct: 765 SMM 767
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF +P+ Y+ V+GLLCN + VDN F F++M + PD TY ++ + K
Sbjct: 471 MMSKGF--IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F EM+++ P + I L A + A E++ +L G +P +
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 210 NVLLVGLRNLGRL 222
L+ G G++
Sbjct: 589 TALIDGHCKSGQI 601
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y L +R +Q+ + L +M E C+P+ + F++ + + D ++ +L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV------FRFFDQMVFHGAFPDSLTYNM 141
M G P ++YN ++G +C N + ++ + + +M+ + + +
Sbjct: 393 KKMGDCG--CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ CL K + + EM+ + P + I +L +A + + A ++ + N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
++P + +L+ +G L R++ +EM+ VT L A Y ++R M
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA-YLKARKM 566
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 97/227 (42%), Gaps = 9/227 (3%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++E+ E+ + V+ Y + L +EA+ FL M+ +C P + + L ++
Sbjct: 289 LIEKEEFKLDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ +M+ G P+ ++N+++ C + D ++ +M G P +
Sbjct: 348 RQLGRCKRILSMMITEG--CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 138 TYNMIFECLIKNKKVHEV------ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + N+K+ + E + EM+ +N + L A + E A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
I ++ G +P ++ + ++ L N ++ + EEM + ++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 93/248 (37%), Gaps = 20/248 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K + AN+ F M+ E +V+ Y + + Q+++A + M+G
Sbjct: 559 AYLKARKMSSANELFEMMLS--EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616
Query: 61 FPTLKFF----------------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
P + + +D L K + L D+M G PN I+Y
Sbjct: 617 IPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE--PNHIVY 674
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+A++ C +D F +M G P+ TY+ + + L K+K++ M++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P + I L + + A + + + E G P + ++ G G++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794
Query: 225 VRRFAEEM 232
+M
Sbjct: 795 CLELMRQM 802
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIR----GKQVDEALKFLRVMKGENCFPTLKF 66
A K +GEM++ HV+ + + L R + ++A +R M + P
Sbjct: 429 AEKAYGEMLD------AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S + +L + + L++ M +++P++ Y ++ C + ++FD+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKS--NHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV G P+ +TY + +K +K+ F M+ P + I + +
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600
Query: 187 PEFAIEIWNYILENGILP 204
E A +I+ + N +P
Sbjct: 601 IEKACQIYARMRGNADIP 618
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFE----WNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 56
G+ + G + A F +M +R P+ V++Y T L L Q+D+A K M
Sbjct: 254 GFFRSGQLQHAWDFFLQMKKRGSNDENCKPD-VVSYTTVLHGLGVAGQLDKARKVFDEMS 312
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E C P++ ++ + + K + V ++D M+ G+ +PN++ Y ++ LC+
Sbjct: 313 REGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGY--IPNVVTYTVLIRGLCHAGK 370
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+D + D+M G P+ TYN++ L + + + + F M K E
Sbjct: 371 IDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGE 420
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 26 PEHVLAY--ETFLITLIR----GKQVDEALKF-LRVMKGENCFPTLKFFSNALDILVKLN 78
P H LA+ TF I R ++ D A++F L + + L F++ LD LVK
Sbjct: 131 PRHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVK-- 188
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
S H + ++ + P+ + YN + C D QMV G P T
Sbjct: 189 -SRHAGKAASLVRALERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTT 247
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKN-----EWQPTPLNCATAITMLLDADEPEFAIEI 193
YN+I + ++ ++ +FF +M K +P ++ T + L A + + A ++
Sbjct: 248 YNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKV 307
Query: 194 WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
++ + G P A+ N L+ G + D ++M+ + ++ Y V ++ L
Sbjct: 308 FDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCH 367
Query: 250 A 250
A
Sbjct: 368 A 368
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 9/194 (4%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + Y T R K AL LR M PT ++ L + H
Sbjct: 207 PPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHA-- 264
Query: 86 LWDIMVGIGF------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
WD + + N P+++ Y V+ L +D + FD+M G P TY
Sbjct: 265 -WDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATY 323
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
N + + K V + F +MI+ + P + I L A + + A+++ + +
Sbjct: 324 NALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKR 383
Query: 200 NGILPLEASANVLL 213
G P + NVL+
Sbjct: 384 EGCEPNVQTYNVLI 397
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G+++ A + F EM R + V+ Y + L +++EA R M+
Sbjct: 191 GCCRQGDLLRAQEMFDEM--RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGV 248
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+P + ++ +D KL ++ ++L+ M+G G L+P+++ + ++ LC ++
Sbjct: 249 YPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG--LVPDVVTFGILIDGLCKFGEMKAA 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M+ P+ YN + + K V E F E+ + E P + I
Sbjct: 307 RNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRG 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L E A I+ + + GIL + N L+ G G++ +M
Sbjct: 367 LCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQM 418
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A F M+ +F P ++ Y + + + V EA+ ++
Sbjct: 296 GLCKFGEMKAARNLFVNMI-KFSVTP-NIAVYNSLIDAYCKVGDVSEAMALFLELERFEV 353
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +S + L ++ + +++ M G ++ N + YN+++ C +D
Sbjct: 354 SPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG--ILANSVTYNSLIDGCCKEGKMDKA 411
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM +G P+ +T++ + + K + + + EM+ P + I
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
+ A+++++ +L+NGI P + + LL GL G++SD
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A + + +M R P+ V+ + + + R Q+D+AL+ M
Sbjct: 366 GYGKVGDLGSAVEVYQQMT-RLRCPPD-VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 423
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS + L K N S + L + + + ++ P +YN V+ +LC VD
Sbjct: 424 QPNVYTFSIIIHSLCKQNRSDEAIGLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEA 482
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD TY ++ ++ E FFHEM++ P + I+
Sbjct: 483 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 542
Query: 181 LLDADEP 187
LL A P
Sbjct: 543 LLKAGMP 549
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +N V+ +C V ++M G PD++T+N++ + L + +V
Sbjct: 249 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 308
Query: 159 FHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ ++ P + + I+ A + E A+ ++N ++ +GI+P + NVL+ G
Sbjct: 309 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 368
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+G L ++M R VT L +
Sbjct: 369 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 402
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 43/257 (16%)
Query: 17 EMVER---FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALD 72
E+VER F +P+ V + + L R +V + LR ++ + C P + F++ +
Sbjct: 272 ELVERMNEFGCSPDTV-THNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 330
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV------VGLL--------------- 111
K + +++ MV G +MPN + YN + VG L
Sbjct: 331 GYCKAGKLEDAMAVYNDMVASG--IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 388
Query: 112 --------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
C +D+ R + M H P+ T+++I L K + E
Sbjct: 389 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIG 448
Query: 158 FFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+E+ ++ + P I +L + + A I + E G P + + +L++G
Sbjct: 449 LLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGY 508
Query: 217 RNLGRLSDVRRFAEEML 233
R+S+ F EM+
Sbjct: 509 CMKSRISEAIMFFHEMV 525
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 5/254 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGKQVDEALKFLRVMKGENCFPTL 64
N+++A+ T F E AY + +LI RG+ D F R ++ P +
Sbjct: 193 ANLLDASATLLSKASEFGCRVE-AYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDV 251
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + + ++ ++L + M G + P+ + +N +V LC N+V
Sbjct: 252 WSFNVVIKGVCRVGQVQKALELVERMNEFGCS--PDTVTHNILVDGLCRTNEVSRGHEVL 309
Query: 125 DQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ G P+ +T+ + K K+ + +++M+ + P + I
Sbjct: 310 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 369
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+E++ + P + + L+ G G+L D R +M RI T
Sbjct: 370 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 429
Query: 244 MQKLKKAFYNESRS 257
+ + ++RS
Sbjct: 430 FSIIIHSLCKQNRS 443
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
E + +A + F EM E+ + Y + L + ++ A+K MKG NC +
Sbjct: 90 ENGIPDAVQLFDEMTEKGLFGDAKT--YGILINGLCKARKTGLAIKLHEKMKG-NCKGDV 146
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
+ +D L K +T + ++ M+G G ++P++++Y++++ LC + FF
Sbjct: 147 FTYGMIIDSLCKDGMTTEALDMFSEMIGAG--ILPDVVVYSSLMDGLCRFGRLKEALEFF 204
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M G D TYN + L + EV F + M+ + P I L
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A +I + G P + N L+ GL +G+L D + E + +R I
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 317
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG V EA + E++ P+ +L Y T + L Q+++A K +
Sbjct: 260 GLCKEGKVGEAQQIL-ELMHHKGKEPD-ILTYNTLMNGLCLVGQLEDATKLFESLADRGI 317
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ ++ K +L++ M G L P+ + YN ++G LC + V
Sbjct: 318 KLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG--LKPSTVTYNTLIGALCQSGRVRTA 375
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +M G F TY ++ + L KN + E + F + K E +P + +
Sbjct: 376 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG 435
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A + E A + ++ I +NG+ P + N+L+ GL N G LS+ + +M + L
Sbjct: 436 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 495
Query: 241 DVT 243
+T
Sbjct: 496 SIT 498
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G V A K F EM ++ + Y L L + ++EA+ + +K P
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQF--LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPN 425
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ FS LD + + + +D + G L P+ I YN ++ LCN + +
Sbjct: 426 IEVFSILLDGMCRAGKLEEAWKQFDEISKNG--LEPDTIAYNILINGLCNKGMLSEAVKL 483
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM G PDS+T+N+I + L+K ++HE EM + P T++ + L
Sbjct: 484 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD--EAVTSMLLCLA 541
Query: 184 ADEPE 188
+ +P+
Sbjct: 542 SFDPQ 546
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + EA + F EM R + + Y T + L + +V A K M+
Sbjct: 330 GYCKDQKIDEAFRLFEEM--RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG-FNLMPNLIMYNAVVGLLCNNNDVDN 119
F L + LD L K + H + D+ I PN+ +++ ++ +C ++
Sbjct: 388 FLKLSTYCVLLDGLCK---NGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
++ FD++ +G PD++ YN++ L + E +M + P + I
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 504
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
LL +E AI++ + P EA ++LL
Sbjct: 505 NLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 539
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ + +V + N + + + FD+M G F D+ TY ++ L K +K +
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG-LAIK 133
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
HE +K + I L A+++++ ++ GILP + L+ GL
Sbjct: 134 LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 219 LGRLSDVRRFAEEMLNRRI 237
GRL + F +EM R I
Sbjct: 194 FGRLKEALEFFKEMEGRGI 212
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 6/228 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ + T + L +V +AL + M E P + ++ L K+ D+ + L
Sbjct: 10 VVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLS 65
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M ++ ++++YNA++ LC + + F +M G FPD +TY+ + + +
Sbjct: 66 KMEET--HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ + + E +MI+ + P + + I L+ + A EI+ +L GI P +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
N ++ G RL+D +R + M ++ VT L + R
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 3/244 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
HV+ Y + L + A M + FP + +S +D + T QL
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
M+ N P+++ ++A++ L V + M+ G FP ++TYN + +
Sbjct: 135 RDMIERQIN--PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K ++++ + M P + +T I A + +EI+ + GI+
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLER 267
+ L+ G +G L + M++ + +T Q + + ++ + +R F LE
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK-KELRKAFAILED 311
Query: 268 RWKT 271
K+
Sbjct: 312 LQKS 315
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G +A + +M+ER + NP+ V+ + + L++ +V EA + M FPT
Sbjct: 123 RSGRWTDAEQLLRDMIER-QINPD-VVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ +D K + ++ D M + P+++ ++ ++ C VDN
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS--PDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M G +++TY + + + ++ + MI + P + + + L
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 184 ADEPEFAIEIWNYILENGILP 204
E A I + ++ + P
Sbjct: 299 KKELRKAFAILEDLQKSEVCP 319
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + EA + + R + P V+ + + + +++D+AL+ M NC L+
Sbjct: 367 GKLDEAEELLNGAIAR-GFTPT-VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQ 424
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ +++L+K + + M G L PN++ Y +++ C V F
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANG--LAPNVVTYTSIIDGYCKVGMVGAALEVFK 482
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
M G P++ TY + LI++KK+H+ +M ++ P + T I
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
E + A ++ + +NG+ P E + NVL L GR + F ++ + +++ VT
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYT 599
Query: 246 KLKKAF 251
L F
Sbjct: 600 SLVDGF 605
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EM+E+ P+ AY L + + +EA FL V KG T +++ +D K
Sbjct: 552 EMMEQNGLTPDEQ-AYNVLTDALCKSGRAEEAYSFL-VRKG--VVLTKVTYTSLVDGFSK 607
Query: 77 LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS 136
++ L + MV G +L Y+ ++ LC ++ DQM G +
Sbjct: 608 AGNTDFAAVLIEKMVNEGCK--ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ Y +I +IK K ++ F+EMI + +P+ I+ E A +
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725
Query: 197 ILENGILPLEASANVLLVGLRNLG 220
+ +G+ P + N+ + G ++G
Sbjct: 726 MERDGVTPDVVTYNIFINGCGHMG 749
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 20/273 (7%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K G + EA GEM ER P+ V+ Y F+ +D A L+ M +C
Sbjct: 710 YCKIGRIEEAEHLIGEM-ERDGVTPD-VVTYNIFINGCGHMGYIDRAFSTLKRMVDASCE 767
Query: 62 PTLKFFSNALDILVKLN-DSTHTV---------------QLWDIMVGIGFNLMPNLIMYN 105
P + L +K++ + H V QL + M+ G N P ++ Y+
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLN--PTVVTYS 825
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
+++ C ++ D M+ P+ Y M+ +C K + +F +MI+
Sbjct: 826 SIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEF 885
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+QP + I L D + + A ++ +L E + +L GL G +
Sbjct: 886 GFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFC 945
Query: 226 RRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
+ M NR I + L + S S+
Sbjct: 946 SQLLAAMDNRHCRIDSESYSMLTDSIREASGSV 978
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 13/251 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEG + +A EM R V Y + + ++ +AL +M+ C
Sbjct: 293 GLCKEGRIHDARGLLDEMPLR--GVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350
Query: 61 FPTLKFFSNALDILV--KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P +++ + L KL+++ +L + + GF P +I + ++ C +D
Sbjct: 351 NPDDWTYNSLIYGLCGGKLDEAE---ELLNGAIARGFT--PTVITFTNLINGYCKAERID 405
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ R M+ D Y ++ LIK ++ E + +EM N P + + I
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSII 465
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD----VRRFAEEMLN 234
A+E++ + G P + L+ GL +L + + E+ +
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525
Query: 235 RRILIYDVTMQ 245
++ Y +Q
Sbjct: 526 PGVITYTTLIQ 536
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 9/212 (4%)
Query: 31 AYETFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+Y T + +L G + EAL LR+ KG+ C P + ++ + L + + L++
Sbjct: 238 SYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNE 297
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI---FECL 146
MV G ++PN++ YN++V LC +D QM + PD +TY + + CL
Sbjct: 298 MVQKG--VVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCL 355
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
+ K E F EM + P + + + L + A EI++ I G P
Sbjct: 356 GRWK---EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI 412
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
S ++LL G GR D+ M + I+
Sbjct: 413 ISYSILLHGYATEGRFVDMNNLFHSMTDNGIV 444
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 5/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG V+ N F M + H + + + +DEAL M+G+
Sbjct: 421 GYATEGRFVDMNNLFHSMTDNGIVADSH--CFNILINAHAKRGMMDEALLIFTEMRGQGV 478
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + L ++ ++ M+ IG L PN ++Y++++ C + D+
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIG--LKPNTVVYHSLIQGFCTHGDLIKA 536
Query: 121 FRFFDQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+M+ G P+ ++ I L +V ++ F+ +I +P + I
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A + + ++ G P + + L+ G GR+ D EML +R+
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656
Query: 240 YDVTMQKLKKAFYNESRS 257
VT + + R+
Sbjct: 657 TTVTYSLVLDGLFRAGRT 674
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + FFS+ + L + ++++++ IG P++ +N+++ C +D F
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR--PDIFTFNSLIDGYCLVGKMDKAF 608
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D MV G PD +TY+ + K+ ++ + F EM+ +PT + + + L
Sbjct: 609 GVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGL 668
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A A ++++ ++E+G ++ ++L GL
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGL 703
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA F EM R + +V+ Y T + L R ++ +A++ L M P
Sbjct: 459 KRGMMDEALLIFTEM--RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPN 516
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + + D +L M+ G PN+ +++++ LCN V N
Sbjct: 517 TVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP-RPNITFFSSIIHSLCNEGRVMNAQDV 575
Query: 124 FDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
F+ ++ G PD T+N + + CL+ K+ + M+ +P + +T I
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLV--GKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----RI 237
+ + + ++ +L + P + +++L GL GR S ++ EM+ I
Sbjct: 634 FKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSI 693
Query: 238 LIYDVTMQKLKK 249
Y + +Q L +
Sbjct: 694 STYTIILQGLCR 705
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 34 TFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
TFL L K+ DEAL L M C P ++ + L + S + + M
Sbjct: 205 TFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTK 264
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G P+++ Y V+ L ++ F++MV G P+ +TYN I L K + +
Sbjct: 265 -GDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323
Query: 153 HEVENFFHEMIKNEWQP 169
+ E +M N QP
Sbjct: 324 DKAELVLRQMFDNSIQP 340
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV-FHGAFPDSLTYNMIFECLIKNKKVH 153
+P+ YN V+ LC + +M G PD ++Y M+ L ++
Sbjct: 230 LGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEIS 289
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ N F+EM++ P + + + L A + A + + +N I P E + ++
Sbjct: 290 KACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMI 349
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYD-VTMQKLKKAFYNESRS 257
G LGR + + +EM R LI D VT L + RS
Sbjct: 350 HGYSCLGRWKEAAKMFKEM-TREGLIPDIVTFNSLMDSLCKHKRS 393
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 12/255 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG + +A F EMV++ +V+ Y + + L + + +D+A LR M +
Sbjct: 281 GLFMEGEISKACNLFNEMVQK--GVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSI 338
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L +++ M G L+P+++ +N+++ LC +
Sbjct: 339 QPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG--LIPDIVTFNSLMDSLCKHKRSKEA 396
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F + G PD ++Y+++ + ++ N FH M N + +
Sbjct: 397 AEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD----SHCFNI 452
Query: 181 LLDADEP----EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
L++A + A+ I+ + G+ P + ++ L +GRL+D +M++
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 237 ILIYDVTMQKLKKAF 251
+ V L + F
Sbjct: 513 LKPNTVVYHSLIQGF 527
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 43/247 (17%)
Query: 8 VVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
V + +K FG + E V+ Y T + + ++D+ L R M + PT
Sbjct: 601 VGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVT 660
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S LD L + ++ +++ M+ G + ++ Y ++ LC NN D F +
Sbjct: 661 YSLVLDGLFRAGRTSAAKKMFHEMIESGTAM--SISTYTIILQGLCRNNCTDEAITLFHK 718
Query: 127 M--------------VFH---------------------GAFPDSLTYNMIFECLIKNKK 151
+ + H G P++ TY ++ L+K
Sbjct: 719 LGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGS 778
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYI--LENGILPLEASA 209
V E + F M K P+ I MLL E ++ Y+ ++ I+ LEAS
Sbjct: 779 VEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGE---IVKAGYYMSKVDGTIISLEAST 835
Query: 210 NVLLVGL 216
LL+ L
Sbjct: 836 TSLLISL 842
>gi|224139118|ref|XP_002326772.1| predicted protein [Populus trichocarpa]
gi|222834094|gb|EEE72571.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 110/249 (44%), Gaps = 4/249 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+++ +V + EMV+R + P +Y + + +AL+ M+ NC
Sbjct: 227 GFKESRDVTAMELFYHEMVKR-GFKPSSS-SYGIRIDAYCKKGYFADALRIFEEMERANC 284
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PTL+ + + ++ +L+D + NL + YNA++ L +V +
Sbjct: 285 LPTLETVTTLIHGAGVARNAMKARELFDEIPKR--NLQADTGAYNALISSLVKCREVKSA 342
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ D+M + D +TY+ +F L+K+ + V +H+MI + P +
Sbjct: 343 IQLMDEMEKNNIHYDDMTYHTMFLGLMKSGSIEGVCELYHKMIDRNFVPKTRTVVMLMKF 402
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + + +W Y++ G P + ++L+ GL + GR + + +++ L R I +
Sbjct: 403 FCVNSQIDLGLNLWGYLVGKGYCPHHHALDLLVTGLCSRGRSHEAFKCSKQSLERGIHVS 462
Query: 241 DVTMQKLKK 249
+ L++
Sbjct: 463 EAVYGMLER 471
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 2/229 (0%)
Query: 27 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E + Y + + ++++L L + +G+ +S ++ L K V +
Sbjct: 92 EDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSV 151
Query: 87 WDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECL 146
+ M+ G PN +YN ++ + D+ R F +M P +TY+ + L
Sbjct: 152 LNGMIKSGCK--PNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGL 209
Query: 147 IKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLE 206
K ++ E + EM++ W+P + + + L + E A+++WN +L G P
Sbjct: 210 CKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDV 269
Query: 207 ASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
N+L+ GL ++G+ +M + VT L + FY +
Sbjct: 270 QMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDG 318
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 12/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A M++ HV Y T + + + D+A++ R M +C
Sbjct: 138 GLCKEAKLDKAVSVLNGMIKSGCKPNAHV--YNTLINGFVGASKFDDAIRVFREMGSMDC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ + ++ L K + L M+ G+ P +I Y+ ++ LC + V+
Sbjct: 196 SPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWK--PCVITYSLLMKGLCQGHKVEMA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q++ G PD +N++ L K + +M N W P N T T+
Sbjct: 254 LQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDM--NHWNCAP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ IW IL +G+ P S N+ L GL + R+S F + L ++
Sbjct: 311 MEGFYKDGDIRN-ALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKK 369
Query: 237 I 237
I
Sbjct: 370 I 370
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + F EM + +P ++ Y T + L +G++ EA ++ M + P + +S
Sbjct: 182 DAIRVFREM-GSMDCSPT-IVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSL 239
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + + +QLW+ ++ GF P++ M+N ++ LC+ + + M
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVLSKGFK--PDVQMHNILIHGLCSVGKTQHALMLYFDMNH 297
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + E K+ + + ++++ QP ++ + L + F
Sbjct: 298 WNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISF 357
Query: 190 AIEIWNYILENGILP 204
AI + L I P
Sbjct: 358 AILFLHDALTKKIFP 372
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA EM+E+ W P V+ Y + L +G +V+ AL+ + + P ++ +
Sbjct: 217 EAYDLVKEMLEK-GWKP-CVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNI 274
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + + H + L+ M +N PNL+ +N ++ + D+ N + +++
Sbjct: 275 LIHGLCSVGKTQHALMLYFDMNH--WNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILR 332
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
G PD ++YN+ + L ++ F H+ + + PT
Sbjct: 333 SGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPT 373
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 53/275 (19%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ G++ A + + EM E + +P+ V+ Y LI FLRV + ++CF
Sbjct: 2 ESGDIDGAKRVYMEMAES-KVSPDAVV-YNAMLIG------------FLRVGRIKDCF-- 45
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
LW++M G N++ +N ++ L +N +VD
Sbjct: 46 ---------------------DLWELM---GRKGSQNVVSFNIMMRGLFDNGEVDKAISI 81
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC---ATAITM 180
++ M G DS+TY +I + KN +++ H + E + L+ + I
Sbjct: 82 WELMKKSGFVEDSITYGIIIDGFCKNGYINKS---LHVLEIAEGKGGVLDAFAYSAMING 138
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
L + + A+ + N ++++G P N L+ G + D R EM +
Sbjct: 139 LCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPT 198
Query: 237 ILIYDVTMQKLKKA-FYNESRSMRDRFDSLERRWK 270
I+ Y + L K ++E+ + LE+ WK
Sbjct: 199 IVTYHTLINGLCKGERFSEAYDLVKEM--LEKGWK 231
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKASKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNRRVDVAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + ++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQSDVYTYSVLINGLCKASKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN++V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA F +M ER + P +V Y + + L + K++D ALK L M +C
Sbjct: 680 GFCKVGKLDEAQMVFTKMSER-GYGP-NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G + PN++ Y A++ VD
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH--PNVVTYTAMIDGFGKAGKVDKC 795
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G P+ +TY ++ + + EM + W P +
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYW-PKHM---AGYRK 851
Query: 181 LLDADEPEFAIEIW--NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+++ EF I + + I EN +P+ + +L+ GRL +EM
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EMV + +V+ Y + ++ +++ A + +M E C P
Sbjct: 527 KVGLLQQARKWFDEMVR--DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ ++ +D K Q++ M G + F + PN+ Y A+V
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + V D M G P+ + Y+ + + K K+ E + F +M + + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
++ I L + A+++ + +LEN P ++ GL +G+ + R
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 230 EEM 232
M
Sbjct: 765 SMM 767
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF +P+ Y+ V+GLLCN + VDN F F++M + PD TY ++ + K
Sbjct: 471 MMSKGF--IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F EM+++ P + I L A + A E++ +L G +P +
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 210 NVLLVGLRNLGRL 222
L+ G G++
Sbjct: 589 TALIDGHCKSGQI 601
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y L +R +Q+ + L +M E C+P+ + F++ + + D ++ +L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV------FRFFDQMVFHGAFPDSLTYNM 141
M G P ++YN ++G +C N + ++ + + +M+ + + +
Sbjct: 393 KKMGDCG--CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ CL K + + EM+ + P + I +L +A + + A ++ + N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
++P + +L+ +G L R++ +EM+ VT L A Y ++R M
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA-YLKARKM 566
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 97/227 (42%), Gaps = 9/227 (3%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++E+ E+ + V+ Y + L +EA+ FL M+ +C P + + L ++
Sbjct: 289 LIEKEEFKLDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ +M+ G P+ ++N+++ C + D ++ +M G P +
Sbjct: 348 RQLGRCKRILSMMITEG--CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 138 TYNMIFECLIKNKKVHEV------ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + N+K+ + E + EM+ +N + L A + E A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
I ++ G +P ++ + ++ L N ++ + EEM + ++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIR----GKQVDEALKFLRVMKGENCFPTLKF 66
A K +GEM++ HV+ + + L R + ++A +R M + P
Sbjct: 429 AEKAYGEMLD------AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S + +L + + L++ M +++P++ Y ++ C + ++FD+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKS--NHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV G P+ +TY + +K +K+ F M+ P + I + +
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600
Query: 187 PEFAIEIWNYILENGILP 204
E A +I+ + N +P
Sbjct: 601 IEKACQIYARMRGNADIP 618
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 93/248 (37%), Gaps = 20/248 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K + AN+ F M+ E +V+ Y + + Q+++A + M+G
Sbjct: 559 AYLKARKMSSANELFEMMLS--EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616
Query: 61 FPTLKFF----------------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
P + + +D L K + L D+M G PN I+Y
Sbjct: 617 IPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE--PNHIVY 674
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+A++ C +D F +M G P+ TY+ + + L K+K++ M++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P + I L + + A + + + E G P + ++ G G++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794
Query: 225 VRRFAEEM 232
+M
Sbjct: 795 CLELMRQM 802
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 24 WNPEHVLAYETFLIT--LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
W E ++++E + I LI G + L M P +K + L IL N
Sbjct: 160 WVMERIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLV 219
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
++++ +M G + P + YN ++ C +V +M G +P +T+N+
Sbjct: 220 KALEVYRMMGEYG--IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277
Query: 142 IFECLIKNKKVHEVENFFHEMIK-----NEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ L K ++ + + EM K + + PL C LL A+ +W
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVE-----ALALWEE 332
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
++ G+ P AS N ++ G G++SD R+ +ML + ++
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLM 374
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G +VEA + EMV R +P V ++ T + + ++ +A + L M +N
Sbjct: 316 GYCKKGLLVEALALWEEMVTR-GVSPT-VASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF-NLMPNLIMYNAVVGLLCNNNDVDN 119
P + ++ + +L + L D + F NL N++ YN ++ LC D++
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLD---ELRFRNLSFNIVTYNTLIDGLCRLGDLET 430
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ + M+ G PD +TY ++ K + + FF EM+ P I
Sbjct: 431 ALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIV 490
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + A ++ +L G P + NV + GL LG L + ++M+
Sbjct: 491 GELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+KL D+ +L + M+ GF P++I YN V LC +++ +M+ G P
Sbjct: 493 LKLGDTAKAFKLQEEMLTKGFP--PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVP 550
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D +TY ++N + E F++M+ PT + I ++A+ +
Sbjct: 551 DHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYF 610
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ E G++P + NVL+ G + ++ +F EM + I
Sbjct: 611 LEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGI 653
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 2/209 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y T L + +G +V AL + M+ C+P+ F+ ++ L K + L
Sbjct: 237 VTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQ 296
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + P YN ++ C + +++MV G P ++N I K
Sbjct: 297 EMAKAGLRVSP--YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCK 354
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K+ + +M+K P ++ T I A + + + + +
Sbjct: 355 EGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
N L+ GL LG L + E+M+NR I
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGI 443
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA + +M+ R P+HV Y +F+ + + E + M
Sbjct: 526 GLCKLGNLEEAGELLQKMI-RDGHVPDHV-TYTSFMHAHMENGHLREGREIFYDMLSRGQ 583
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF---NLMPNLIMYNAVVGLLCNNNDV 117
PT+ ++ +L+ + + W + + ++PN+I YN ++ C +
Sbjct: 584 TPTVVTYT----VLIHAHALNGRLD-WAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA-T 176
D +FF +M G FP+ TY ++ K E + +M+ +P +C
Sbjct: 639 DQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD--SCTHG 696
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASA 209
A+ LD D A++ ++ +G ++A+
Sbjct: 697 ALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A + + +M R P+ V+ + + + R Q+D+AL+ M
Sbjct: 197 GYGKVGDLGSAVEVYQQMT-RLRCPPD-VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 254
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS + L K N S + L + + + ++ P +YN V+ +LC VD
Sbjct: 255 QPNVYTFSIIIHSLCKQNRSDEAIGLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEA 313
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD TY ++ ++ E FFHEM++ P + I+
Sbjct: 314 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 373
Query: 181 LLDADEP 187
LL A P
Sbjct: 374 LLKAGMP 380
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +N V+ +C V ++M G PD++T+N++ + L + +V
Sbjct: 80 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 139
Query: 159 FHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ ++ P + + I+ A + E A+ ++N ++ +GI+P + NVL+ G
Sbjct: 140 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 199
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+G L ++M R VT L +
Sbjct: 200 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 233
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 43/257 (16%)
Query: 17 EMVER---FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALD 72
E+VER F +P+ V + + L R +V + LR ++ + C P + F++ +
Sbjct: 103 ELVERMNEFGCSPDTV-THNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 161
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV------VGLL--------------- 111
K + +++ MV G +MPN + YN + VG L
Sbjct: 162 GYCKAGKLEDAMAVYNDMVASG--IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 219
Query: 112 --------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
C +D+ R + M H P+ T+++I L K + E
Sbjct: 220 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIG 279
Query: 158 FFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+E+ ++ + P I +L + + A I + E G P + + +L++G
Sbjct: 280 LLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGY 339
Query: 217 RNLGRLSDVRRFAEEML 233
R+S+ F EM+
Sbjct: 340 CMKSRISEAIMFFHEMV 356
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 5/254 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGKQVDEALKFLRVMKGENCFPTL 64
N+++A+ T F E AY + +LI RG+ D F R ++ P +
Sbjct: 24 ANLLDASATLLSKASEFGCRVE-AYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDV 82
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + + ++ ++L + M G + P+ + +N +V LC N+V
Sbjct: 83 WSFNVVIKGVCRVGQVQKALELVERMNEFGCS--PDTVTHNILVDGLCRTNEVSRGHEVL 140
Query: 125 DQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ G P+ +T+ + K K+ + +++M+ + P + I
Sbjct: 141 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 200
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+E++ + P + + L+ G G+L D R +M RI T
Sbjct: 201 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 260
Query: 244 MQKLKKAFYNESRS 257
+ + ++RS
Sbjct: 261 FSIIIHSLCKQNRS 274
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 15/257 (5%)
Query: 1 GWEKEGNVVEANKTFGE------MVERFEWN----PEHVLAYETFLITLIRGKQVDEALK 50
W K VV+A G+ MV R + P +Y + L R + +ALK
Sbjct: 159 AWNK---VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215
Query: 51 FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGL 110
M P ++ +D VK D +L D M+ G PN++ YN ++
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK--PNIVTYNVLLSG 273
Query: 111 LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
LC +D D+M H FPD TY+++F+ L + + + + F E +K
Sbjct: 274 LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 333
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
C+ + L + A ++ ++ G++P N L+ G + L E
Sbjct: 334 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393
Query: 231 EMLNRRILIYDVTMQKL 247
+M +R I +T L
Sbjct: 394 QMKSRHIRPDHITYNAL 410
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A EM E+ +P V + T + Q+++ L M+ + + F
Sbjct: 420 VTKAEDLVMEM-EKSGVDPS-VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + K V + D M I ++ PN +YN+++ + D + F ++M
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDM--IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G +TYN++ + L ++ ++ E E + + +P ++ T I+ + +
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+E+ + + GI P + + L+ L + GR+ D+ ++ML++ +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 645
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +M+ ++ + Y + + I ++A + MK +
Sbjct: 486 KNGKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L + + +L + G L P+++ YN ++ CN D D
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQG--LRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+M +G P TY+ + L +VH++E + +M+ +P+
Sbjct: 602 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 648
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 33/208 (15%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+++ Y L L R ++DE + M + FP +S D L + +S + L+
Sbjct: 263 NIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLF 322
Query: 88 ------DIMVG---------------------------IGFNLMPNLIMYNAVVGLLCNN 114
+M+G + L+P ++YN ++ C
Sbjct: 323 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQV 382
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
D+ F F+QM PD +TYN + L K + V + E+ EM K+ P+
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGI 202
T I A + E + + + + GI
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/214 (17%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+++ + + + ++ EA+ L M ++ P + +++ +D ++ D+ L +
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 533
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + +++ YN ++ LC ++ +D + G PD ++YN I
Sbjct: 534 KMKNSGVS--ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ EM K +PT T ++ L A ++ +L + P +
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+++ S V +EM + I D
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN ++A F EM E+ + +VL Y + + +A + LR M N P
Sbjct: 92 KDGNHIKAQNIFTEMHEKGIF--PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPD 149
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS ++ VK + +L+ M + N+ P I Y++++ C ++ +++
Sbjct: 150 VVTFSALINAFVKEGKVSGAEELYREM--LRRNIFPTTITYSSMIDGFCKHSRLEDAKHM 207
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKK-----------VHEVENFFHEMIKNEWQPTPL 172
FD MV G PD +T N + + + K+ V+ ++ F EMI N P +
Sbjct: 208 FDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIV 267
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
C T + L + + E A+E++ ++ + A+ N+++ G+
Sbjct: 268 TCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 2/237 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +V+ + T + L R +V +AL + M E P + ++ + KL D+ +
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M + N+++Y+A+V LC + + F +M G FP+ LTYN + +
Sbjct: 67 MLRKM--DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K + E +MI+ P + + I + + A E++ +L I P
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPT 184
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+ + ++ G RL D + + M+++ +T+ L R + F
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGF 241
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + GNV A F EM+ +P+ ++ T L L ++++AL+ +V +
Sbjct: 240 GFCQVGNVNVAQDLFQEMISN-GVSPD-IVTCNTLLAGLCENGKLEKALEMFKVFQKSK- 296
Query: 61 FPTLKFFSNALDILVK-LNDSTHTVQLWDIMVGIGFNLMP------NLIMYNAVVGLLCN 113
+ + +I++ + + WD+ FN +P +++ YN ++G+
Sbjct: 297 ---MDLDTATCNIIINGMCKGNKVDEAWDL-----FNSLPVNGVETDVVTYNILIGVFVK 348
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ + +M+ G P ++TYN + + K ++ E M+ P +
Sbjct: 349 EGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVT 408
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+T I A + +E+++ + + G++ + N L+ G +G L+ + EEM+
Sbjct: 409 FSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV 468
Query: 234 NRRILIYDVTMQKL 247
+ + +T + +
Sbjct: 469 SSGVCPDTITFRSM 482
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 4/215 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V++A MVE E + + Y T + + + AL LR M
Sbjct: 19 GLCREGRVLQALALVDRMVE--EGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQI 76
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S +D L K + ++ M G + PN++ YN ++ C+ +
Sbjct: 77 KANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKG--IFPNVLTYNCMIDGYCSYGKWSDA 134
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M+ PD +T++ + +K KV E + EM++ PT + ++ I
Sbjct: 135 EQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDG 194
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
E A +++ ++ G P + N L+ G
Sbjct: 195 FCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDG 229
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEGN + A + EM+ + P V Y + + + +++EA + + M E C P
Sbjct: 348 KEGNFLRAEDIYLEMLCK-GIIPSTV-TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPD 405
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS + K ++L+ M G L+ + I YNA++ C D++
Sbjct: 406 VVTFSTLIKGYCKAGRVDDGLELFSEMCQRG--LVADTITYNALIHGFCKVGDLNGAQDI 463
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
F++MV G PD++T+ + L ++ + ++ K+
Sbjct: 464 FEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ +C N VD + F+ + +G D +TYN++ +K E+ + EM+
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
P+ + + + + E A ++ + ++ G P + + L+ G GR+ D
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAF 251
EM R ++ +T L F
Sbjct: 425 GLELFSEMCQRGLVADTITYNALIHGF 451
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+ +A + + +M P ++ ++ L K + H +QL + M G+ N + Y
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYP--TNTVTY 58
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N++V LC + +++ + D++++ G P+ TY+ + E K + V+E E+I
Sbjct: 59 NSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIA 118
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
WQP ++ +T L E AI + + G P S N++L L + GR +
Sbjct: 119 KGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEE 178
Query: 225 VRRFAEEM 232
+ EM
Sbjct: 179 ANQLLAEM 186
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWN--PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
K GN+ A ++VE+ E N P + + Y + + L ++++L+ L + +
Sbjct: 32 KRGNIGHAM----QLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLV 87
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P +S L+ K ++L D ++ G+ PNL+ YN ++ LC +
Sbjct: 88 PNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ--PNLVSYNVLLTGLCKEGRTEEAI 145
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
RFF + G P+ ++YN+I L + E EM E P+ + I L
Sbjct: 146 RFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSL 205
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
E A E+ + ++ P + N ++ L G+L V + ++M++ R
Sbjct: 206 AFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHR 260
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V EA K E++ + W P ++++Y L L + + +EA++F R + + P
Sbjct: 102 KERGVNEAMKLLDEIIAK-GWQP-NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPN 159
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L QL M P+L+ YN ++G L + +++ F
Sbjct: 160 VVSYNIILRSLCHEGRWEEANQLLAEMDS--EERSPSLVTYNILIGSLAFHGRIEHAFEV 217
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D+MV P + TYN I L K K+ V +MI + P
Sbjct: 218 LDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNP 263
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 3/206 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y L + + V+EA+K L + + P L ++ L L K + ++ + +
Sbjct: 92 TYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 151
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
GFN PN++ YN ++ LC+ + + +M P +TYN++ L +
Sbjct: 152 PSKGFN--PNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHG 209
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ EM++ ++P+ I L + + I+ + ++ + P E + N
Sbjct: 210 RIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFN 269
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ V L GR+ + + + N++
Sbjct: 270 AIAV-LCKQGRVPEAFSIIQNLGNKQ 294
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 7/234 (2%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G + A + EMV R + P Y + L + ++D +K L M C P
Sbjct: 209 GRIEHAFEVLDEMV-RASFKPS-ATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEG 266
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI-MYNAVVGLLCNNNDVDNVFRFF 124
F NA+ +L K + + I+ +G + Y V+ LC + F+
Sbjct: 267 TF-NAIAVLCK---QGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLL 322
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M G PD TY+ + L + E F + +N+++P N I +
Sbjct: 323 YEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKS 382
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ +++I ++E G P E + +++ G+ + +E+L R+++
Sbjct: 383 GRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQVM 436
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K GN+ EA F + R + E V+ Y + +R + EA++ M
Sbjct: 490 GLFKNGNISEARNYF-DTWTRMDL-MEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ F+ ++ + D ++ +++ G L+P+++ Y ++ C ++ +
Sbjct: 548 TPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG--LVPSVVTYTTLMNAYCEVGNMQEM 605
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F F +M + P +TY ++ + L + K+HE M P + T I
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A++++N +L + P + + VL+ L G L DV R + +R I +
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Query: 241 DVTMQKLKKA 250
T + KA
Sbjct: 726 KXTYMTIIKA 735
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 4/242 (1%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
NP+ ++ Y T + + ++EALK + + F++ L L K+ +
Sbjct: 373 NPD-LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L+D M + L P+ I+Y+ ++ LC V ++ ++QM FP +
Sbjct: 432 TLFDEMETL--RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L KN + E N+F + + + I + D A++++ ++E GI P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDS 264
+ N L+ G G L + R+ E + + ++ VT L A Y E +M++ F
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA-YCEVGNMQEMFHF 608
Query: 265 LE 266
L
Sbjct: 609 LH 610
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 11/183 (6%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT---LKFFSNALDILVKLNDSTH 82
P+ V Y T + +GK++ +AL+ +M NC PT K NAL I L D
Sbjct: 654 PDSV-TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712
Query: 83 -TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
V + D N+ Y ++ C V +F+QM+ G Y+
Sbjct: 713 MVVSIED------RNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSA 766
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L K + E + FF M+ P P C T + E ++++G
Sbjct: 767 VINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826
Query: 202 ILP 204
+
Sbjct: 827 FIS 829
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 2/198 (1%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
+Y L L +DEAL F M+ P + ++ + L + ++ M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ G N P+L+ Y ++ C +++ + + + G + + YNM+ CL K
Sbjct: 368 LLQGLN--PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG 425
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
++ E F EM +P + + I L + A +++ + P +
Sbjct: 426 RIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485
Query: 211 VLLVGLRNLGRLSDVRRF 228
+L+GL G +S+ R +
Sbjct: 486 AVLLGLFKNGNISEARNY 503
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+ + YN ++ LC +D F D M HG PD +TYN + + + +
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+M+ P + T I E A+++ L G N+LL
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420
Query: 216 LRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKL-KKAFYNESRSMRDRFDSLERRW 269
L +GR+ + +EM R+ ++Y + + L K+ F + + ++ L+R++
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM-RLKRKF 478
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
N ++ YN+ LL N D ++ ++++ GA T +++ L + K+ +
Sbjct: 199 LNFQASVPTYNS---LLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLED 255
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+F H+ K P+ ++ T ++ + A + +++NG+L S N+LL
Sbjct: 256 AISFLHDSNK-VVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLH 314
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
GL G + + F ++M + VT L K F
Sbjct: 315 GLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGF 351
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWGLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N V
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVVLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G++V A + F EM +R + V Y T + L R ++ EA K L+ M
Sbjct: 373 GFCNKGDLVSARRWFDEM-QRKGLATDGV-TYTTLINGLCRAGELKEAEKVLQEMLARRL 430
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ +D K Q+ + MV G + PN++ Y A+ LC DV
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG--VAPNVVTYTALSDGLCKQGDVQAA 488
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M G ++ TYN + L K + + +M +P T I
Sbjct: 489 NELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDA 548
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + E + A ++ +L+NGI P + NVL+ G GR+ ++ E ML + I
Sbjct: 549 LCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN 608
Query: 241 DVTMQKLKKAF 251
T L K +
Sbjct: 609 ATTYNSLMKQY 619
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 6/250 (2%)
Query: 7 NVVEANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
N V + E +E F+ P+ +V +Y L L +V++A + M P +
Sbjct: 239 NAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVV 295
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
+ + L + + V+L D MV G PN +Y +VV LLC+ V + +
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVE--PNATVYTSVVALLCDKGRVSDALTVVE 353
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
MV H D Y + + +F EM + + T I L A
Sbjct: 354 DMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG 413
Query: 186 EPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
E + A ++ +L + E + VL+ G G++++ + M+ R + VT
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473
Query: 246 KLKKAFYNES 255
L +
Sbjct: 474 ALSDGLCKQG 483
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G+V AN+ EM + E N Y + + L + +D+A++ + M
Sbjct: 478 GLCKQGDVQAANELLHEMSNKGLELN---ACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534
Query: 60 CFPTLKFFSNALDILVKLN--DSTH-------------TVQLWDIMVGIGF--------- 95
P + ++ +D L K D H T+ +++++ GF
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMN-GFCMSGRVEGG 593
Query: 96 ----------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
N+ PN YN+++ C N++ + + M P+ TYN++ +
Sbjct: 594 KKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
K + + E + F +EMI+ ++ T + + I +L
Sbjct: 654 HCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 93/235 (39%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA + MV+R +V+ Y L + V A + L M +
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQR--GVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+++ ++ L K ++ M G L P++ Y ++ LC + ++D
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG--LKPDVYTYTTLIDALCKSGELDRA 558
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ +G P +TYN++ + +V + M++ P + +
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + EI+ + + P E + N+L+ G + + + F EM+ +
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 17/178 (9%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS--LTYNMIFECLIKNKKV 152
+ + P+ NAV+ L +D F PD +YN++ + L +V
Sbjct: 229 YGISPSPEACNAVLSRL----PLDEAIELFQ------GLPDKNVCSYNILLKVLCGAGRV 278
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ F EM P + I E E A+++ + ++ G+ P +
Sbjct: 279 EDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSV 335
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
+ L + GR+SD E+M++ ++++ + + F N+ S R FD ++R+
Sbjct: 336 VALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK 393
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + A+ EM++ P ++ Y + +V+ K L M +N P
Sbjct: 551 KSGELDRAHDLLQEMLDN-GIKPT-IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN 608
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+++ + N+ T +++ M N+ PN YN ++ C + F
Sbjct: 609 ATTYNSLMKQYCIGNNMKSTTEIYKGMCS--RNVEPNENTYNILIKGHCKARSMKEAQYF 666
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP 171
++M+ G + +Y+ + L K KK E FH+M K + P
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEP 714
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 1/204 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L +++EA+ + M+G C P ++ + + + ++
Sbjct: 152 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 211
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+M G N PNL+ +N++V LC ++ + FD+MV G PD ++YN + K
Sbjct: 212 LMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+HE F EM + P + + I A E A+ + + E G+ E +
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G L D EEM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEM 354
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GN+ +A +M ER E + + + + +D+AL + M+ P+
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ ++ KL +L M + P+++ Y+ ++ C ++D+ F+
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAK--RVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+M+ G PD++TY+ + L + K++++ F M++ QP T I
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCK 480
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
E A+ + + ++ G+LP + +VL+ GL R + R
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YNAV+ L ++ + + RF M+ HG P+ TYN++ L ++ E
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG-ILPLEASANVLLVGLR 217
+M P + T + A E + A + + + E G P + N ++ GL
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDV 242
GR+ R+ +EM+ R L DV
Sbjct: 235 KAGRMEGARKVFDEMV-REGLAPDV 258
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + EM E P+ V+ Y T + + +D A + + M +
Sbjct: 372 GYCKLGRMDLARELIREM-EAKRVKPD-VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Query: 61 FPTLKFFSNALDILV---KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P +S+ + L +LND+ +L++ M+ +G + P+ Y ++ C +V
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDAC---ELFENMLQLG--VQPDEFTYTTLIDGHCKEGNV 484
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+ D+M+ G PD +TY+++ L K+ + E ++ + P P N
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED--PVPDN 538
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG++ + T+ EM+++ +P +V+ Y + + L + + VD+A++ L M
Sbjct: 97 GFFKEGDLDKTYSTYNEMLDQ-RISP-NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + + M G P+++ YN+++ LC N
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE--PDVVTYNSLMDYLCKNGRCTEA 212
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G P+ TY + + + E+ M++N P + +
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
++ E A+ +++ + + G+ P + ++ L GR+ D + E+M++
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 110/283 (38%), Gaps = 43/283 (15%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G EA K F M +R PE + Y T L + E L +M P
Sbjct: 205 KNGRCTEARKIFDSMTKR-GLKPE-ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
FS + K + ++ M G N PN + Y AV+G+LC + V++ +
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 124 FDQMVFHGAFPDSLTYN-----------------MIFE------CL------------IK 148
F+QM+ G P ++ YN +I E CL K
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+V E E F M++ +P + +T I A + + A ++ ++ G+ P +
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
+ L+ G + R+ D EM ++ I+ Y++ +Q L
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%)
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L+ L N S ++L IM G + P+++ Y+ V+ D+D
Sbjct: 48 IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +++M+ P+ +TYN I L K + V + M+K+ P + + +
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ +P+ AI + +G+ P + N L+ L GR ++ R+ + M R
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 222
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 4/216 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K+ V EA F +M ++ NP V Y + L + +V++A+ + M E
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQ-GLNPNAV-TYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + L N +L M+ G L N I +N+++ C V
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL--NTIFFNSIIDSHCKEGRVIES 387
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD MV G PD +TY+ + + K+ E M+ +P + +T I
Sbjct: 388 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLING 447
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ A+ ++ + +G+ P + N++L GL
Sbjct: 448 YCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G V +A F +M++ +P +++ Y + + L + + A + L ++ C
Sbjct: 310 KSGRVEDAMLYFEQMIDE-GLSPGNIV-YNSLIHGLCTCNKWERAEELILEMLDRGICLN 367
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I Y+ ++ C +D +
Sbjct: 368 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYSTLIDGYCLAGKMDEATK 424
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TY+ + K ++ + F EM + P + + L
Sbjct: 425 LLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF 484
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I ++G ++ N++L GL
Sbjct: 485 QTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + EA K MV P+ V Y T + + ++ +AL R M+
Sbjct: 412 GYCLAGKMDEATKLLASMVS-VGMKPDCV-TYSTLINGYCKISRMKDALVLFREMESSGV 469
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ L L + + +L+ + G L L YN ++ LC N D+
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL--ELSTYNIILHGLCKNKLTDDA 527
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
R F + ++ T+N++ + L+K + E ++ F N P
Sbjct: 528 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 576
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ A + + +M R P+ V+ + + + R Q+D+AL+ M
Sbjct: 369 GYGKVGDLGSAVEVYQQMT-RLRCPPD-VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 426
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS + L K N S + L + + + ++ P +YN V+ +LC VD
Sbjct: 427 QPNVYTFSIIIHSLCKQNRSDEAICLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEA 485
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M G PD TY ++ ++ E FFHEM++ P + I+
Sbjct: 486 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 545
Query: 181 LLDADEP 187
LL A P
Sbjct: 546 LLKAGMP 552
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ +N V+ +C V ++M G PD++T+N+I + L + +V
Sbjct: 252 PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEV 311
Query: 159 FHEMIKNE-WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLR 217
+ ++ P + + I+ A + E A+ ++N ++ +GI+P + NVL+ G
Sbjct: 312 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 371
Query: 218 NLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+G L ++M R VT L +
Sbjct: 372 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 405
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 43/257 (16%)
Query: 17 EMVER---FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALD 72
E+VER F +P+ V + + L R +V + LR ++ + C P + F++ +
Sbjct: 275 ELVERMNEFGCSPDTV-THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 333
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV------VGLL--------------- 111
K + +++ MV G +MPN + YN + VG L
Sbjct: 334 GYCKAGKLEDAMAVYNDMVASG--IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 391
Query: 112 --------------CNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
C +D+ R + M H P+ T+++I L K + E
Sbjct: 392 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIC 451
Query: 158 FFHEM-IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+E+ ++ + P I +L + + A I + E G P + + +L++G
Sbjct: 452 LLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGY 511
Query: 217 RNLGRLSDVRRFAEEML 233
R+S+ F EM+
Sbjct: 512 CMKSRISEAIMFFHEMV 528
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 5/254 (1%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGKQVDEALKFLRVMKGENCFPTL 64
N+++A+ T F E AY + +LI RG+ D F R ++ P +
Sbjct: 196 ANLLDASATLLSKASEFGCRVE-AYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDV 254
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + + ++ ++L + M G + P+ + +N +V LC N+V
Sbjct: 255 WSFNVVIKGVCRVGQVQKALELVERMNEFGCS--PDTVTHNIIVDGLCRTNEVSRGHEVL 312
Query: 125 DQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++ G P+ +T+ + K K+ + +++M+ + P + I
Sbjct: 313 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 372
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A+E++ + P + + L+ G G+L D R +M RI T
Sbjct: 373 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 432
Query: 244 MQKLKKAFYNESRS 257
+ + ++RS
Sbjct: 433 FSIIIHSLCKQNRS 446
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 2/222 (0%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P +Y + L R + +ALK M P ++ +D VK D +
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFR 250
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D M+ G PN++ YN ++ LC +D D+M H PD TY+++F+
Sbjct: 251 LRDQMLHDGPK--PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDG 308
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L + + + + F E +K C+ + L + A +++ ++ G++P
Sbjct: 309 LTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT 368
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
N L+ G + L E+M +R I +T L
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A EM E+ +P V + T + Q+++ L M+ + + F
Sbjct: 420 VTKAEDLVMEM-EKSGVDPS-VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + K V + D M I ++ PN +YN+++ + D + ++M
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDM--IYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G +TYN++ + L ++ ++ E E + + +P ++ T I+ + +
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A+E+ + + GI P + + L+ L + GR+ D+ ++ML++ +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + EA +M+ ++ + Y + + I ++AL + MK +
Sbjct: 486 KNGKIPEAVAILDDMI--YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSAS 543
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L + + +L + G L P+++ YN ++ CN D D
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQG--LRPDVVSYNTIISACCNKGDTDKALEL 601
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+M +G P T + + L +VH++E + +M+ +P+
Sbjct: 602 LQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPS 648
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+++ + + + ++ EA+ L M ++ P + +++ +D ++ D+ + L +
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVE 533
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + +++ YN ++ LC ++ +D + G PD ++YN I
Sbjct: 534 KMKNSGVS--ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ EM K +PT C T ++ L A ++ +L + P +
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
+++ S V +EM + I D
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L+ L K Q+++++V G L+P ++YN ++ C D+ F F+QM
Sbjct: 341 LNGLCKDGKVAKAKQVFEMLVHTG--LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
PD +TYN + L K + V + E+ EM K+ P+ T I A + E
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 191 IEIWNYILENGI 202
+ + + + GI
Sbjct: 459 FTVLSDMQQKGI 470
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 6/231 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y L L R ++DE + M + P +S D L + +S + L+
Sbjct: 263 NVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLF 322
Query: 88 --DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ G+ I+ N LC + V + F+ +V G P ++ YN +
Sbjct: 323 AESLKKGVMLGAYTCSILLNG----LCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + + F +M +P + I L + A ++ + ++G+ P
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ N L+ G+L +M + I ++ + KAF +
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
+ L R Q+ EA +F MK C + ++ + + ++++ M+
Sbjct: 202 FRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMI 261
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G ++P++ YNA + +LC ++V+N F++M+ G P+S TYN++ L +
Sbjct: 262 GEG--VLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGR 319
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F M +E +P I DA+E E + ++ + + LP + N+
Sbjct: 320 MEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNI 379
Query: 212 LLVGL---RNLGRLSDVRRFAEEMLNRRILIYDVTMQKL--------KKAFYNESRSMRD 260
L+ + + L + EM+ R L T ++ + F E ++
Sbjct: 380 LISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRLQS 439
Query: 261 RFDSLERRWK 270
R L RR K
Sbjct: 440 RCGRLPRRLK 449
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + EA + F +M +R V+ Y T + +V +A + M GE
Sbjct: 208 GFFRAGQLKEAWEFFLQMKKR--KCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGV 265
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ + +L K ++ + + +++ M+ G+ MPN YN V+ LC+ ++
Sbjct: 266 LPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGY--MPNSTTYNVVIRGLCHVGRMEKA 323
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M P+ YN++ +++ + N F +M + P I+
Sbjct: 324 MEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISA 383
Query: 181 LLDADEPEFAIEIWNYIL---ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
+ + ++ + ++ E G LP + + N +L GL L+ + FA+E+L
Sbjct: 384 MFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGL----LLTGNQDFAKEIL 435
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 9/193 (4%)
Query: 40 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
+ + D A+K M C L F+ LD+L K + V++ D + F
Sbjct: 147 VSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCK----SKRVEMADNKLFKVFRGRF 202
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+++ + + FF QM D +TY + +V + + F
Sbjct: 203 RILLKG-----FFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVF 257
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+EMI P+ I +L D E AI ++ +L G +P + NV++ GL ++
Sbjct: 258 NEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 317
Query: 220 GRLSDVRRFAEEM 232
GR+ F M
Sbjct: 318 GRMEKAMEFMARM 330
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 103/254 (40%), Gaps = 11/254 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A + M P Y + L +V +AL L M C
Sbjct: 118 GYCRYGRLDAARRLIASM-----PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGC 172
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ L+ + K + + + D M G PN++ YN ++ +C VD+
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT--PNIVTYNVIINGMCREGRVDDA 230
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+++ +G PD ++Y + + L ++ +V+ F EM+ + P + +
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----LNRR 236
E AI++ + ++G P N+++ + GR+ D F M N
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 237 ILIYDVTMQKLKKA 250
+ Y ++ L +A
Sbjct: 351 TISYTTVLRGLCRA 364
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G +EG V +A + + + + P+ +++Y T L L ++ D+ M + C
Sbjct: 220 GMCREGRVDDAKEILNRL-SSYGFQPD-IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 277
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F + + +Q+ M G PN + N V+ +C VD+
Sbjct: 278 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT--PNTTLCNIVINAICKQGRVDDA 335
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F + M +G PD+++Y + L + + + EM++ P + T I +
Sbjct: 336 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 395
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L E AI++ + E G + N L+ G GR+
Sbjct: 396 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 437
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+ Y ++ LC+ V + D M+ G P +TY ++ E + K+ E N
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 198
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
EM P + I + + A EI N + G P S +L GL
Sbjct: 199 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA 258
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
R DV+ EM++++ + +VT L + F
Sbjct: 259 ARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/303 (17%), Positives = 111/303 (36%), Gaps = 67/303 (22%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G A + EMV + P + + + TF+ L + +++A+K + +M C
Sbjct: 360 GLCRAGRWEHAKELLPEMVRK--NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGC 417
Query: 61 -------------FPTLKFFSNALDILVKLNDSTHTVQLWDIMVG--------------- 92
F +AL++ L +T+ ++ G
Sbjct: 418 SVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLA 477
Query: 93 --IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
I + N + +N +V C V+ +QM+ HG P+ +T+N + + + K+
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI----------------- 193
E H ++ + ++ + +L D E AI++
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597
Query: 194 ------------------WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ Y++ NG +P E++ +L+ GL + G L + R E+ +
Sbjct: 598 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657
Query: 236 RIL 238
+L
Sbjct: 658 GVL 660
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 4/253 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K EA EM R + +++ Y + + R +VD+A + L + P
Sbjct: 188 KSSGFGEAMNVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L L L+ MV +PN + ++ +V C V+ +
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVD--KKCVPNEVTFDMLVRFFCRGGMVERAIQV 303
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
QM HG P++ N++ + K +V + +F + M P ++ T + L
Sbjct: 304 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 363
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A E A E+ ++ P E + N + L G + + E M + VT
Sbjct: 364 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423
Query: 244 MQKLKKAFYNESR 256
L F + R
Sbjct: 424 YNALVHGFCVQGR 436
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 16/208 (7%)
Query: 16 GEMVER----FEWNPEHVLAYETFLITLI-----RGKQVDEALKFLRVMKGENCFPTLKF 66
G MVER + +H T L ++ + +VD+A FL M C P
Sbjct: 294 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 353
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
++ L L + H +L MV N PN + +N + +LC ++ + +
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVR--KNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M +G +TYN + +V F+ + +P + T +T L A+
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAER 468
Query: 187 PEFAIEIWNYILENGILPLEA-SANVLL 213
+ A E+ +++ PL A + NVL+
Sbjct: 469 LDAAAELLAGMIQKDC-PLNAVTFNVLV 495
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G+V EA + M + V+ Y + + L +V EA + L+ M +C
Sbjct: 179 GICKDGDVEEALEILDGM--KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SC 233
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L F+ LD K +++ + M N++P++I Y +V LC V
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR--ENILPDVITYTILVNGLCRVGQVQVA 291
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE---------WQPTP 171
F +++V G PD + Y + + L K+ ++ E EM E P
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 172 LNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ L+ A+ + + ++ G +P + N L+ GL R+ + A+E
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 411
Query: 232 MLNRRILIYDVTMQKL 247
M + DVT+ +
Sbjct: 412 MASLGCFPNDVTLGSV 427
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE---------NCFPTLKFF 67
E + R + P+ V+AY + + L + +++EA K ++ M N P L +
Sbjct: 296 EEIVRQGYIPD-VIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ L L+K + V L +V G+ +P+++ YN ++ LC N V D+M
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGY--VPDVVTYNTLIDGLCKANRVREACDLADEM 412
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G FP+ +T + L + +V + + EM + P + + I L +D
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ A + + + G+ + + L+V + + GR+++ +EM+ R L T + L
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Query: 248 KKAFYNES 255
++A + S
Sbjct: 533 EEAAMSNS 540
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 11/257 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G K+GN +A K F E +E NP+ + Y T + L + +++A + L M +G
Sbjct: 106 GLFKDGNPDQAVKLF-ENMESSRVNPD-IFTYNTVISGLCKSGNLEKARELLEEMIRRGG 163
Query: 59 NCFPTLKFFSNALDI-LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ ++ + K D +++ D M G P++I YN+++ LC V
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG--PAPDVITYNSIIHALCVAGRV 221
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
M PD +T+N + + K + EM + P +
Sbjct: 222 VEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 278
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ L + + A + I+ G +P + L+ GL G + + + +EM R I
Sbjct: 279 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREI 338
Query: 238 LIYDVTMQKLKKAF-YN 253
L V++ + F YN
Sbjct: 339 LAEMVSINMVPPLFTYN 355
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 13/224 (5%)
Query: 19 VERFEWNPEH------VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD 72
++ F+W E V +Y L L++ K + + C P L F +
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIR 70
Query: 73 ILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGA 132
K +T ++ + F++ P++ ++N ++ L + + D + F+ M
Sbjct: 71 GNCKAGQATRALEFLRAL--DEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 133 FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP----LNCATAITMLLDADEPE 188
PD TYN + L K+ + + EMI+ + P N + D D E
Sbjct: 129 NPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEE 188
Query: 189 FAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A+EI + + G P + N ++ L GR+ + + M
Sbjct: 189 -ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P+L S L++L+ + + +L + L PN ++N +V C N D++ F
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLL-LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAF 216
Query: 122 RFFDQMVFHG-AFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW-QPTPLNCATAIT 179
++M G ++P+S+TY+ + +CL + + E F +MI E P P+ I
Sbjct: 217 LVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMIN 276
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
A E E A +I +++ +NG P + + L+ G +G++ + ++ +E+
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 3/219 (1%)
Query: 30 LAYETFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ Y T + L + EA++ F ++ E P F+ ++ + + ++ D
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G N PN+ Y+A++ C + + FD++ G D++ Y + C +
Sbjct: 293 FMKKNGCN--PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N + E EM + + L + L E A+++ + G+ + S
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
++L L G L +F M R I + T +L
Sbjct: 411 YRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 3/209 (1%)
Query: 30 LAYETFLIT-LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ + T L+ L +V EA +FL M + P + +S A+ LV + + H ++++
Sbjct: 531 IKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFK 590
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ G P+++ +N ++ LC N F ++V G P +TYN+ +C K
Sbjct: 591 DLWSHGH--CPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCK 648
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
N V + M K + P+ + T + + P+ AI ++ + +NG P + +
Sbjct: 649 NGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQIT 708
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L+ GL R ++ + EM + +
Sbjct: 709 FMALIYGLCKCCRPTEALCYLREMQQKEM 737
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
+ ++ + ++ Q+D AL M+ PT+ ++N +D L K N + +L
Sbjct: 426 ITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLR 485
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M +G P YN++ G LC DV +M G P ++ + L
Sbjct: 486 EMKELGIE--PTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCD 543
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
+ +V E F M + + P ++ + AI L++ E + A++I+ + +G P
Sbjct: 544 HGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVC 603
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNR 235
NVL+ GL + R ++ E++ R
Sbjct: 604 FNVLIRGLCKVNRFTEAEDLFHELVKR 630
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 4/187 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
G V+EA + M ++ + P+ +++Y + L+ ++VD A+K + + P +
Sbjct: 544 HGRVIEACEFLDNMTQQ-GFLPD-IVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDV 601
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
F+ + L K+N T L+ +V G L P+++ YN + C N +VD
Sbjct: 602 VCFNVLIRGLCKVNRFTEAEDLFHELVKRG--LSPSVVTYNLFIDCWCKNGNVDKAMAHL 659
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
+M P +TY + + K ++ + F EM KN P + I L
Sbjct: 660 FRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKC 719
Query: 185 DEPEFAI 191
P A+
Sbjct: 720 CRPTEAL 726
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 12/212 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K EA F E+V+R +P V+ Y F+ + VD+A+ L M E+
Sbjct: 610 GLCKVNRFTEAEDLFHELVKR-GLSPS-VVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDK 667
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ +D K + L+ M G PN I + A++ LC
Sbjct: 668 VPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNG--CPPNQITFMALIYGLCKCCRPTEA 725
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN-----CA 175
+ +M PDS Y + + + + F EM+ + P PL+
Sbjct: 726 LCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFPKPLDKNYPTVV 785
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEA 207
AI D I++ ++E G LP+
Sbjct: 786 DAILKFCKDDRTSSGIQV---LIEEGKLPMHC 814
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + EM E+ W E V + + + +VD+A + + M + K F
Sbjct: 214 QALSVYKEMEEK-GWVDERVCSMMALCFSKL--GEVDKAFELVERMGECGMRLSEKTFCV 270
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ VK + +QL+D M + P++ +Y+ ++G LC N D D F +M
Sbjct: 271 LIHGFVKESRVDKALQLFDKMRRED-SFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKE 329
Query: 130 HGAFPDSLTYNMIFECLIKNKKV 152
G PD + C +K +
Sbjct: 330 FGVRPDIGILTKLISCFSDSKSM 352
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 25/233 (10%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KE V +A + F +M + P+ V Y+ + L + K D A+ MK
Sbjct: 274 GFVKESRVDKALQLFDKMRREDSFTPD-VSLYDVLIGGLCKNKDTDRAISLFSEMKEFGV 332
Query: 61 FPTLKFFSNALDILVKLNDSTHTV-QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + + +DS V +L + + + +++YNA++ N+ +D
Sbjct: 333 RPDIGILTKLISCF---SDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDE 389
Query: 120 VFRFFDQMVFHGA--------------------FPDSLTYNMIFECLIKNKKVHEVENFF 159
+R M+ + FP+ +++++ + +KN ++ + F
Sbjct: 390 AYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLF 449
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
++M + +PT L I L ++ E + E+ + E GI P + N +
Sbjct: 450 NDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSI 502
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + G++ +A + F +M + +V Y + +L R Q+ A M C
Sbjct: 291 GWCRAGDISKAEEVFSDM--KMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 348
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F++ + + VK + +++++ M +G + I YN ++ C + +++
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPA--DTISYNFIIESHCRDENLEEA 406
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + MV G P++ T+N IF C+ K V+ + M + QP L + M
Sbjct: 407 AKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRM 466
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL-- 238
++ + +++ + E+ + P + +L+ ++ ++ + EM+ + L
Sbjct: 467 FAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRP 526
Query: 239 ---IYDVTMQKLKKA 250
+Y+ ++ L+KA
Sbjct: 527 NLSVYETVLELLRKA 541
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 3/173 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + + +R EA+ M+ C P + FS + L K + +D
Sbjct: 213 VHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFD 272
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
+ P++++Y ++V C D+ F M G P+ TY+++ + L +
Sbjct: 273 ---SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCR 329
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
++ + F EMI P + + + + + A E ++++N + G
Sbjct: 330 CGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLG 382
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 39/276 (14%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
+EG +A K M +R P +++ Y T ++ L V++A L M P
Sbjct: 605 SREGKTAKALKLLNGM-KRSSIKP-NLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNN------- 115
T L + S +++ + M+ G L ++ +YN +V +LC N
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAG--LCADITVYNTLVRVLCYNGMTRKAMV 720
Query: 116 ----------------------------DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+DN F +DQM++HG P+ T+N + L
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
++ E + +EM K +P+ L +T A+ ++ ++ G LP +
Sbjct: 781 SAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVS 840
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ N L+ +G +S + EM NR +L T
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCT 876
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 4/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+G EA F EM E+ P HV Y + TL + ++ +E+L L +
Sbjct: 288 GLCKDGRFSEAYALFREM-EKIGAAPNHV-TYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L ++ +D L K ++ + N PN + Y ++ LC +VD
Sbjct: 346 VMDLIMYTALMDWLCKEGKIDEAKDMFRH--ALSDNHTPNGVTYTVLIDALCKAGNVDGA 403
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M P+ +T++ I L+K V + ++ EM + P + T I
Sbjct: 404 EQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG 463
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
E A+++++ +L G+ + + L+ GL+ G++ EM R +L+
Sbjct: 464 SFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLD 523
Query: 241 DVTMQKLKKAFY 252
V L +
Sbjct: 524 HVNYTTLIDGLF 535
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y + + L R +VD A + MK + P + ++ + + N L++
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G ++P+++ +A+VG LC + + F +M GA P+ +TY M+ + L K
Sbjct: 269 EMVRKG--VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ +E + E++ + + L + + A +++ + L + P +
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
VL+ L G + + EM + I
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSI 415
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 109/289 (37%), Gaps = 39/289 (13%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K GNV A + EM E+ +P +V+ + + + L++ V +A ++R MK P
Sbjct: 396 KAGNVDGAEQVLSEMEEK-SISP-NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ + +D K + ++ M+ G + N + +++V L N ++
Sbjct: 454 VVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV--NKFIVDSLVNGLKKNGKIEKAEAL 511
Query: 124 FDQMVFHGAF-----------------------------------PDSLTYNMIFECLIK 148
F +M G PD++ YN+ CL
Sbjct: 512 FREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCM 571
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K E E+F EM +P + T I + A+++ N + + I P +
Sbjct: 572 LGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLIT 631
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
+ L+VGL G + + EM + +T +++ +A RS
Sbjct: 632 YSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 99/259 (38%), Gaps = 10/259 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHV---LAYETFLITLIRGKQVDEALKFLRVMKGENC 60
KEG + EA F R + H + Y + L + VD A + L M+ ++
Sbjct: 361 KEGKIDEAKDMF-----RHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + FS+ ++ LVK M G + PN++ Y V+ +
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGID--PNVVTYGTVIDGSFKCLGQEAA 473
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M+ G + + + L KN K+ + E F EM + +N T I
Sbjct: 474 LDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDG 533
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A ++ + E +LP NV + L LG+ + F EEM + +
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593
Query: 241 DVTMQKLKKAFYNESRSMR 259
VT + A E ++ +
Sbjct: 594 QVTYNTMIAAQSREGKTAK 612
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
NL+P+ ++YN + LC F ++M G PD +TYN + + K +
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ M ++ +P + +T I L +A E A + N + +G P + +L
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTM 244
GR SD+ E + L D+T+
Sbjct: 674 CSQ-GRRSDLILEIHEWMMNAGLCADITV 701
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G++ A T+ +M+ + +V + T L L ++ E+ L MK
Sbjct: 743 GHFKSGHLDNAFSTYDQML--YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800
Query: 61 FPTLKFFSNALDILV----KLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
P+ + DILV K ++ V+L+ MVG GF +P + YNA++
Sbjct: 801 EPSNLTY----DILVTGYGKQSNKVEAVRLYCEMVGKGF--LPKVSTYNALISDFSKVGM 854
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ F++M G P S TY+++ K + EV F +M + + P+
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPS 908
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ ++G + EM +R P + T L+ L R +VD A VM
Sbjct: 112 GFSEQGGLAP-EALLAEMCKR--GVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGG 168
Query: 61 FPTLKFFS--NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
L + +D K+ D + + M G + +++ YN++V LC +VD
Sbjct: 169 IGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGV--DVVGYNSLVAGLCRAGEVD 226
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D M G P+ +TY M + V + + + EM++ P
Sbjct: 227 AARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + +L R +V+E + L+ MK + P + + +L K +++
Sbjct: 262 NVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVL 321
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D+M+ G +P+++ YN ++ LC D F+++ G P++ +YN +F L
Sbjct: 322 DVMISDG--CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALG 379
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW-NYILENG-ILPL 205
+ EM+ + P + + I+ L + AIE+ + +E+ P
Sbjct: 380 SSGHKVRALGMILEML-DXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPS 438
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF-----YNESRSMRD 260
S N++L+GL +GR+SD M+++ L + T L + N++R +
Sbjct: 439 VVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLAT 498
Query: 261 RF--------DSLERRWKT 271
S ER +KT
Sbjct: 499 TLVNMDAISEHSFERLYKT 517
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 43/250 (17%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V A + M+ + ++ Y T L L + K+ DEAL + C P
Sbjct: 310 KEGRVDLAIEVLDVMIS--DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 367
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + L S H V+ +++ + + P++I YN+++ LC + VD
Sbjct: 368 ASSYNT---VFSALGSSGHKVRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIEL 424
Query: 124 FDQMVFHGA--FPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
M + P ++YN++ L + +V +
Sbjct: 425 LVDMEMESSECKPSVVSYNIVLLGLCRVGRVSD--------------------------- 457
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
A E+ +++ G LP E + L+ G+ G L+D R A ++N I +
Sbjct: 458 --------ATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDA-ISE 508
Query: 242 VTMQKLKKAF 251
+ ++L K F
Sbjct: 509 HSFERLYKTF 518
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 8/211 (3%)
Query: 24 WNPEHVLAYETFLI--TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
+NP V+ Y T LI TL++G +DEA+K L M N P + F N++ + +
Sbjct: 155 FNPT-VVTY-TILIEATLLQGG-IDEAIKLLDEMFEINLQPDV-FPYNSIIXMCREGYVD 210
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
++ + G+ L ++I YN ++ L N + F MV G + +TY++
Sbjct: 211 RAFEVISSISSKGYAL--DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSV 268
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L ++ KV E +M K +P I +L + AIE+ + ++ +G
Sbjct: 269 LISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDG 328
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+P + N +L L R + E++
Sbjct: 329 CVPDIVNYNTILACLCKQKRADEALSIFEKL 359
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
H Q+ D M GF+ P+++ YN ++G LC+ + F +Q++ P +TY +
Sbjct: 107 HAYQVLDRMKNKGFS--PDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTI 164
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPT--PLNCATAITMLLDADEPEFAIEIWNYILE 199
+ E + + E EM + QP P N +I + + A E+ + I
Sbjct: 165 LIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYN---SIIXMCREGYVDRAFEVISSISS 221
Query: 200 NGILPLEASANVLLVGLRNLGR 221
G + N+LL L N G+
Sbjct: 222 KGYALDVITYNILLRSLXNQGK 243
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 5/230 (2%)
Query: 5 EGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 64
+G + EA K EM E P+ V Y + +I + R VD A + + + + +
Sbjct: 172 QGGIDEAIKLLDEMFE-INLQPD-VFPYNS-IIXMCREGYVDRAFEVISSISSKGYALDV 228
Query: 65 KFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFF 124
++ L L +L MV G N++ Y+ ++ LC + V+
Sbjct: 229 ITYNILLRSLXNQGKWEAGFELMSDMVAKGCE--ANVVTYSVLISSLCRDGKVEEGVGLL 286
Query: 125 DQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
M G PD Y+ + L K +V MI + P +N T + L
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346
Query: 185 DEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A+ I+ + E G P +S N + L + G EML+
Sbjct: 347 KRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLD 396
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 2/228 (0%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+AY T + DE + M L F+ L +L K D +L
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
D ++ G ++PNL YN + LC ++D R +++ G PD +TYN + L
Sbjct: 240 DKVIKRG--VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
KN K E E + +++ +P T I + A I + NG +P E
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
+ L+ GL + G + E L + I + L K N+
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YN ++ LC N+ + ++V G PDS TYN + K V E
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+ N + P + I L E A+ ++N L GI P N L+ GL N
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
G + + + A EM + ++
Sbjct: 404 QGLILEAAQLASEMSEKGLI 423
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 3/204 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K + +T+ MVE+ ++ + L +L R ++D+AL L MK ++
Sbjct: 505 GLCKTSKYEDVMETYKTMVEK--GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F +D K D L+ M + + + + YN ++ +V
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV-YMVSCSTPTYNIIIHAFTEKLNVTMA 621
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F +MV PD TY ++ + K V F EM++N + P+ I
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 181 LLDADEPEFAIEIWNYILENGILP 204
L D A I + +++ G++P
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 2/221 (0%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + + L + + AL G+ P + ++ + L QL M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
G L+P + +N +V LC V + M+ G FPD T+N++
Sbjct: 418 SEKG--LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
K+ M+ N P + + L + E +E + ++E G P + N
Sbjct: 476 KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+LL L +L EEM N+ + VT L F
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/144 (15%), Positives = 62/144 (43%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++ P + YNA++ +L ++ D + + +M G PD ++ + + + + H
Sbjct: 105 YDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHA 164
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ M + + T + + + + E++ +L +G+ ++ N LL
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLH 224
Query: 215 GLRNLGRLSDVRRFAEEMLNRRIL 238
L G + + + ++++ R +L
Sbjct: 225 VLCKKGDVKECEKLLDKVIKRGVL 248
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + V A K F EM + E ++Y + L K++DEAL L MK +NC
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQNGCHRNE--VSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D L + + L+ M G + P+ MY ++ C+ + +D
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG--IKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ M+ +G P+ +TYN + + K K VH+ +M++ P
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVP 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 92/231 (39%), Gaps = 5/231 (2%)
Query: 21 RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDS 80
+++ P+ Y L +L R V+E + M + P + F+ ++ KL
Sbjct: 115 KYKLTPK---CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 81 THTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYN 140
Q ++ G + P+ Y + + C +VD F+ F +M +G + ++Y
Sbjct: 172 VEAKQYVTWLIQAGCD--PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 141 MIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN 200
+ L + KK+ E + +M + P I L + + A+ ++ + E+
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 201 GILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
GI P + VL+ + L + E ML ++ +T L K F
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 17/265 (6%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVL---AYETFLITLIRGKQVDEALKFLRVMKGEN 59
K G+ EA++ F M WN AY + L +L ++ EA+ L E
Sbjct: 371 SKLGHSSEAHRLFCNM-----WNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFH-EK 424
Query: 60 CFPTLKFFSNAL-DILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
C T N + L +L +H L++ M G P++ YN ++ VD
Sbjct: 425 CITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDG--PPPDIFTYNILISSYGRAGRVD 482
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + F+++ PD ++YN + CL KN V E F EM + P + +T I
Sbjct: 483 SAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLI 542
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLN 234
D+ E A +++ ++ G P + N+LL L GR ++ + ++ L
Sbjct: 543 ECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 602
Query: 235 RRILIYDVTMQKLKKAFYNESRSMR 259
+ Y V +++L+ + + R R
Sbjct: 603 PDSITYAV-LERLQSGRHGKLRVRR 626
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 10 EANKTFGEMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
+ +K FG ++ + A+ L L + ++VD+A K MK +C P ++
Sbjct: 203 DCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYT 262
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ + K + ++ L+ M+ GF L NLI YN ++ L D F +MV
Sbjct: 263 IMIRMTGKAGKTDESLALFQAMLEKGFTL--NLIAYNTMIEALAKGRMADKAVLLFSKMV 320
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+G P+ TY+++ L+ ++++++N EM K
Sbjct: 321 ENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV-EMSK 355
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
++L D ++ M+ G++L ++ +N ++ L + VD ++ F+ M P
Sbjct: 199 LRLRDCDKAFGVYLDMLRCGYSL--DIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEP 256
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D+ TY ++ K K E F M++ + + T I L + A+ ++
Sbjct: 257 DTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLF 316
Query: 195 NYILENGILPLEASANVL---LVGLRNLGRLSDVRRFAEEMLNRRILIYDV-TMQKL 247
+ ++ENG P E + +VL LV L +L ++ +++ +N++I Y V T+ KL
Sbjct: 317 SKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKL 373
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 12/266 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV--MKGE 58
+ K G +A ++FG M E F+ P+ V Y L ++R + V L F M
Sbjct: 136 AYAKMGLAEKAVESFGRMKE-FDCRPD-VFTYNVILRIMMR-EDVFFMLAFAVYNEMLKC 192
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
NC P L F +D L K ++ +++D M G G + PN + Y ++ LC +
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSPE 250
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + F +M G +PDS+ +N + + K ++ E K+ + ++ I
Sbjct: 251 DARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI- 237
L A A E++ +L+ I P +L+ GL G++ D + M ++ I
Sbjct: 311 DGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGIT 370
Query: 238 ---LIYDVTMQKL-KKAFYNESRSMR 259
Y+ ++ L + E RS++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQ 396
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G+ +A K F EM + N +A+ L + ++ EA + LR+ + +
Sbjct: 242 GLCQRGSPEDARKLFYEM--KASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L+ +S+ +D L + T +L+ M + N+ P++I+Y ++ L +++
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANM--LKRNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G PD+ YN + + L + E + EM + E P I
Sbjct: 358 LKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A EI+ I ++G P A+ N L+ GL G L + R +M
Sbjct: 418 MCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+++ YN ++ C D+D + + + G PDS+TYN + L + + E
Sbjct: 515 PDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Query: 159 FHEMIKNEWQPTP 171
F+ K++++ +P
Sbjct: 575 FYA--KDDFRHSP 585
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R Q+ EA +F MK C + ++ + + ++++ M+G G ++P+
Sbjct: 203 RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEG--VLPS 260
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
+ YNA + +LC ++V+N F++M+ G P+S TYN++ L ++ + F
Sbjct: 261 VATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMA 320
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
M +E +P I DA+E E + ++ + + LP + N+L+ +
Sbjct: 321 RMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAM 376
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 21/210 (10%)
Query: 40 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
+ + D A+K M C L F+ LD+L K + V++ D
Sbjct: 147 VSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCK----SKRVEMADNK--------- 193
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
++ G + + FF QM D +TY + +V + + F
Sbjct: 194 ---LFKVFRGFF-RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVF 249
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
+EMI P+ I +L D E AI ++ +L G +P + NV++ GL ++
Sbjct: 250 NEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 309
Query: 220 GRLSDVRRFAEEMLNRR----ILIYDVTMQ 245
GR+ F M + + IY+V ++
Sbjct: 310 GRMEKAMEFMARMKDDECEPNVQIYNVVIR 339
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ + G + EA + F +M +R E + V+ Y T + +V +A + M GE
Sbjct: 200 GFFRAGQLKEAWEFFLQMKKRKCEID---VVTYTTVVHGFGVAGEVRKAQRVFNEMIGEG 256
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P++ ++ + +L K ++ + + +++ M+ G+ MPN YN V+ LC+ ++
Sbjct: 257 VLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGY--MPNSTTYNVVIRGLCHVGRMEK 314
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
F +M P+ YN++ +++ + N F +M
Sbjct: 315 AMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKM 357
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 86/226 (38%), Gaps = 30/226 (13%)
Query: 50 KFLRVMKGENCFPTLKF----FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
K L+ K + PT F +A+DI +L D L D M L PN +
Sbjct: 83 KALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRT--RRLGPNPKTFA 140
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN-------- 157
+ + D + F M HG D ++N I + L K+K+V +N
Sbjct: 141 IITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRG 200
Query: 158 ------------FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
FF +M K + + + T + A E A ++N ++ G+LP
Sbjct: 201 FFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPS 260
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKL 247
A+ N + L + + EEML + + Y+V ++ L
Sbjct: 261 VATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGL 306
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 4/151 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V +A + F EM+ E V Y F+ L + V+ A+ M +
Sbjct: 235 GFGVAGEVRKAQRVFNEMIG--EGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGY 292
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + L + ++ M PN+ +YN V+ C+ +++
Sbjct: 293 MPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDD--ECEPNVQIYNVVIRYFCDAEEIEKG 350
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
F++M P+ TYN++ + KK
Sbjct: 351 LNVFEKMGDADCLPNLDTYNILISAMFVRKK 381
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR ++E + M P
Sbjct: 154 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPD 211
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LIPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K + + + EM +P T I
Sbjct: 270 YKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCK 329
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A E +++ I + + L+ GL GR D + EML+
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + K D ++D + G L P++
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSV 177
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ YN ++ D++ FR M+ G PD TY+++ L K K+ + F E
Sbjct: 178 VSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ P + T I + A+EI+ +L +LP + N L+ GL G
Sbjct: 238 MLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGD 297
Query: 222 LSDVRRFAEEM 232
L +EM
Sbjct: 298 LKQAHDLIDEM 308
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 175 PSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG--VQPDVYTYSVLINGLCKESKMDDAN 232
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL 292
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + M+ I + D
Sbjct: 293 XKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 353 VAYTALISGLCQEGRSV 369
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 61/140 (43%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ ++E
Sbjct: 140 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRL 199
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ + QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 259
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ ++ML++ +L
Sbjct: 260 NGRVDLAMEIYKQMLSQCLL 279
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 39/243 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ +E + + N EM E+ P +V+ Y + L +GK++ +AL+ MKG +C
Sbjct: 301 AYCREKDFRKVNSVLNEMEEK--GCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSC 358
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+S+ + IL K +++ M G +P+++ YN ++ C ++ ++
Sbjct: 359 VPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG--AIPDVLTYNTMISAACMHSQEEDA 416
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M PD TY+ + + +N ++ + + M KN
Sbjct: 417 LKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKN--------------- 461
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ ++E+ Y L L+ GL G+L F EEM+++ ++
Sbjct: 462 -------DISLEVGTYSL-------------LVHGLCKSGKLEHACLFFEEMVSKGLVPK 501
Query: 241 DVT 243
D T
Sbjct: 502 DCT 504
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 3/197 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L R + +A++ R M+ + +D LVK N H D+ V +++
Sbjct: 198 LARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHAN---DVFVEFKDSIL 254
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
N +N ++ C +DN + +M HG PD ++Y I E + K +V +
Sbjct: 255 LNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSV 314
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+EM + P + + L E A+E++ + + +P + + L+ L
Sbjct: 315 LNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSK 374
Query: 219 LGRLSDVRRFAEEMLNR 235
GRL D R E+M +
Sbjct: 375 AGRLKDARDVFEDMTKQ 391
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 23/280 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K+ V +A + EMV + P V+ Y T + L Q+ +A+ L M E+
Sbjct: 161 GLCKDKLVNDAFNLYFEMVAK-RICPS-VVTYNTLICGLCIMAQLKDAIGLLHKMILEDI 218
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV------VGLLCNN 114
PT+ FS +D K ++ +M + ++ PN++ YN++ V ++
Sbjct: 219 NPTVYTFSILIDAFCKEGKMKEAKNVFAVM--MKEDVKPNIVTYNSLMDGHHLVNVVKKA 276
Query: 115 ND--------VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
VD F++M F +PD + YN + + L K+ + F EM
Sbjct: 277 KSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRG 336
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
P + + L + AIE+ + + GI P + N+L+ GL GRL D
Sbjct: 337 QPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAE 396
Query: 227 RFAEEML----NRRILIYDVTMQKL-KKAFYNESRSMRDR 261
+ E++L N + Y+ ++ KK ++E+ +M +
Sbjct: 397 KVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSK 436
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 5/205 (2%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V EA F EM F+ ++ Y + + L + + ALKF+ M P + +
Sbjct: 287 VDEAMNLFEEM--HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTY 344
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
++ LD L K ++L + G + P++ YN ++ LC + + + + F+ +
Sbjct: 345 NSLLDALCKNYHVDKAIELLTKLKDQG--IQPSVCTYNILINGLCKSGRLKDAEKVFEDL 402
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
+ G D TYN + + K E +M + P NC I L D E
Sbjct: 403 LVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGEN 462
Query: 188 EFAIEIWNYILENGILPLEASANVL 212
+ A + I+ G EA A+ +
Sbjct: 463 DKAGKFREMIVR-GKCHREAPASTI 486
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+++MYN ++ LC + V++ F + +MV P +TYN + L ++ +
Sbjct: 148 VQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAI 207
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
H+MI + PT + I + + A ++ +++ + P + N L+ G
Sbjct: 208 GLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDG- 266
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTM 244
L +V + A+ + N I + D M
Sbjct: 267 ---HHLVNVVKKAKSIFNTMIKMVDEAM 291
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 5/163 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A K GEM + P + Y + L L + VD+A++ L +K +
Sbjct: 315 GLCKSGRTPYALKFIGEM--HYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGI 372
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P++ ++ ++ L K ++++ ++ G+N ++ YNA++ C D
Sbjct: 373 QPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYN--TDVYTYNAMIKGFCKKGLFDET 430
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
+M G PD+ +I L +K ++ F EMI
Sbjct: 431 LAMVSKMKDSGCSPDAKNCEIIIRSLF-DKGENDKAGKFREMI 472
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + EA K M + + V Y + + + AL + M ++C
Sbjct: 401 GFCKKGKIQEAYKVL-RMATSQGLHLDKV-TYTILITEHCKQGHITCALDLFKQMAEKSC 458
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ + + + + QL+D + IG L+P Y +++ C + +
Sbjct: 459 HPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG--LVPTKQTYTSMIAGYCRLGKLTSA 516
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F++MV HG PDS+TY + L K ++ E F M+ P + T
Sbjct: 517 LKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYE 576
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
D+ A+ + + + +A+ L+ L +G L F + +L++ +
Sbjct: 577 YCRRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVD 633
Query: 241 DVTMQKLKKAFYNESR 256
T + Y +R
Sbjct: 634 HATYTSFINSCYESNR 649
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 93/256 (36%), Gaps = 39/256 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG + A G MVE + + Y T + +G D A + + MK E
Sbjct: 331 GYCKEGKLARAEMLLGRMVE--QGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLE-- 386
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
GF +PN+ YNA++G C +
Sbjct: 387 ---------------------------------GF--LPNIYTYNAIIGGFCKKGKIQEA 411
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++ G D +TY ++ K + + F +M + P T I M
Sbjct: 412 YKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAM 471
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ E + ++++ L G++P + + ++ G LG+L+ + E M+ L
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPD 531
Query: 241 DVTMQKLKKAFYNESR 256
+T L + ESR
Sbjct: 532 SITYGALISSLCKESR 547
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 85/229 (37%), Gaps = 11/229 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITL---IRGKQVDEALKFLRVMKG 57
G +EG EA+ M W L T + + R + R M
Sbjct: 190 GCCREGRFEEADALLAAM-----WAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSE 244
Query: 58 ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + +S +D L + + + MVG G L PN+ + +++ LC +
Sbjct: 245 MGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG--LKPNVYTHTSLIDGLCKIGWM 302
Query: 118 DNVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ FR F ++V ++ P+ TY ++ K K+ E M++ P T
Sbjct: 303 ERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 362
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
I + A E+ N + G LP + N ++ G G++ +
Sbjct: 363 LIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEA 411
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ Y T + L + + +A++ LR M+ P L ++ +D L K T L
Sbjct: 162 VCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE 221
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF-HGAFPDSLTYNMIFECLIK 148
MVG G + ++ YN+++ C R ++MV PD T+N++ + L K
Sbjct: 222 MVGKGICI--DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK 279
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
V E N F MIK +P ++C + A E+++ ++E G LP S
Sbjct: 280 LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ L+ G + + + R EM R ++ VT L R
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 39/220 (17%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW G + EA + F MVER + +V++Y T + + K VDEAL+ L M N
Sbjct: 311 GWCLRGCMSEAKEVFDRMVERGKL--PNVISYSTLINGYCKVKMVDEALRLLTEMHQRN- 367
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
L+P+ + YN ++ L + V
Sbjct: 368 ------------------------------------LVPDTVTYNCLLDGLSKSGRVLYE 391
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ + M G PD +TYN++ + +K + + + F ++ P I
Sbjct: 392 WDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDG 451
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
L + A EI+ + G P + N+++ GLR G
Sbjct: 452 LCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 24/255 (9%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
EK+ + TFG ++ N A+ F + GKQ+D
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD---------------- 438
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S+ ++ L + V++++ M G PN +YNA++ C + R
Sbjct: 439 -VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK--PNSHIYNALISGFCQVYRTSDAVR 495
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ +M +G P +TYN + + L K +K E + EM++N + P + I L
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-----I 237
+ + A+ IW IL G+ N+L+ GL + G++ + +M ++ +
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Query: 238 LIYDVTMQKLKKAFY 252
+ Y+ M L + Y
Sbjct: 616 VTYNTLMDGLYETGY 630
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 41 RGKQVDEALKFLRVMKG-ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNL 97
R D AL R + C P ++ + LD V+ + + + G +
Sbjct: 95 RAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRI 154
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN V+ LC D+D FD + PD +TY+ + L K ++ +
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALD 214
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
EM ++ QP + + A E E + +W+ ++++ G P A+ NV+L GL
Sbjct: 215 LLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274
Query: 217 RNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
GR +V E M L ++ Y + + L ++
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +V+A K + +M + H+ Y + + + +A++ M C PT+
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHI--YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D L K + MV GF P++ Y +++ L ++ +D+ +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFT--PDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
Q+++ G D + +N++ L KV E + F +M E + P N T T++
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM--KEKKNCPPNLVTYNTLMDGLY 626
Query: 186 EPEF---AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
E + A +W I E+G+ P S N + GL + R+ + + +E+L+R I+ +
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686
Query: 243 TMQKLKKA 250
T L +A
Sbjct: 687 TWNILVRA 694
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y L +L +D A+ ++ P +S + L K + H + L D M
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLIKNK 150
+ P+++ YNA++G + + V R +D++V GA P+ TYN++ + L K
Sbjct: 221 R--SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ EV + M+ N QP + I L + + + A +++ I++ G++ A N
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 211 VLLVGLRNLGRLSDVRRF 228
L+ G GR+ + +F
Sbjct: 339 SLVKGFCQAGRVQEAWKF 356
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGEN 59
G K+ + A EM R P+ V+ Y L + + ++ ++ +++K
Sbjct: 202 GLAKQDRLDHALDLLDEM-PRSRVQPD-VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG 259
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L ++ LD L K ++W+ MV NL P++I Y ++ LC + DVD
Sbjct: 260 ARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA--NNLQPDVITYGILIHGLCRSGDVDG 317
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT--- 176
R + +++ G D+ YN + + + +V E F+ + N T
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR----NLRTYNI 373
Query: 177 AITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
I L D+ + AIE+W+ + ++ +P + L+ GL
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMK-GENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
V+ + + L +VDEAL MK +NC P L ++ +D L + LW
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ G L P++I YN + LC+ + + + D+++ G P +T+N++ +I
Sbjct: 639 TSITEDG--LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696
Query: 148 KNKKVH 153
K +
Sbjct: 697 KYGPIQ 702
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 102/264 (38%), Gaps = 20/264 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF--------L 52
G + G+V A + + E+++ + Y + + + +V EA KF L
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAM--YNSLVKGFCQAGRVQEAWKFWDSAGFAGL 365
Query: 53 RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
R ++ N F S +D ++LWD++ +P+ + + ++ LC
Sbjct: 366 RNLRTYNIMIKGLFDSGMVD---------EAIELWDLLEK-DVACIPDTVTFGTLIHGLC 415
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
N + F F++ G D +Y+ + L ++ + + +M K+ +P
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I+ A+ I++ + +NG P + N L+ GL + + A EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 233 LNRRILIYDVTMQKLKKAFYNESR 256
+ T L + +++ +
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKK 559
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++ A F + + ++ P V++Y T + IR +DE + M P
Sbjct: 136 KDGDIRVAQSVF-DAITKWGLRPS-VVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPD 193
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKG--LIPNGVTFTTLIDGHCKNGRVDLAMEI 251
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ PD +TYN + L KN + + + EM +P T I
Sbjct: 252 YKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 311
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ + A + +++ I + + L+ GL G+ D + EML+
Sbjct: 312 EGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLS 362
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 58 ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
E +P +L FF+ + K D ++D + G L P+++ YN ++ D
Sbjct: 117 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG--LRPSVVSYNTLMNGYIRLGD 174
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+D FR M+ +G PD TY+++ L K K+ + F EM+ P + T
Sbjct: 175 LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 234
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I + A+EI+ +L +LP + N L+ GL G L +EM
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ ++ ++ ++L D +L M+ G + P++ Y+ ++ LC + +D+
Sbjct: 157 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANG--VQPDVYTYSVLINGLCKESKMDDAN 214
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + M+ P + T I L
Sbjct: 215 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 274
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 275 CKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDD 334
Query: 242 VTMQKLKKAFYNESRSM 258
V L E +S+
Sbjct: 335 VAYTALISGLCQEGQSV 351
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
+L +N ++ C + D+ FD + G P ++YN + I+ + E
Sbjct: 122 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
M+ N QP + I L + + A E+++ +L G++P + L+ G
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 241
Query: 219 LGRLSDVRRFAEEMLNRRIL 238
GR+ + ML++ +L
Sbjct: 242 NGRVDLAMEIYKRMLSQSLL 261
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVM--KGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
+ ++Y T + +L + EAL ++ M +G C P + F+ + K + +
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L + MV G P+++ YN++V LC +D QMV G PD LTY I
Sbjct: 286 LINEMVQKGVE--PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHG 343
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ E F +M P + + ++ L + A EI+ Y+ G +P
Sbjct: 344 YSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 403
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
S ++LL G GR +D+ M ++ I+
Sbjct: 404 LVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 3/235 (1%)
Query: 34 TFLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG 92
TFL L K+ DEA+ L M C P ++ + L + S + + M
Sbjct: 196 TFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAK 255
Query: 93 IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
G P+++ +N V+ +V ++MV G PD +TYN I + L K + +
Sbjct: 256 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAM 315
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
+ E +M+ +P L I + + + +++ + G++P + N
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSL 265
+ L GR D + M + + V+ L + E R M + F S+
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + FFS+ + L ++++++ IG P ++ +N+++ C ++ F
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDR--PTIVTFNSLIDGYCLVGKMEKAF 600
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D MV G PD +TYN + K+ K+ + F EM+ + +PT + + + L
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGL 660
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGL-RN 218
A A ++++ ++++G + +LL GL RN
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698
Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 106/270 (39%), Gaps = 40/270 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG + N F M ++ H + + + +DEA+ M+G+
Sbjct: 413 GYATEGRFADMNNLFHSMADKGIVANCH--CFNILISAHAKRGMMDEAMLVFTEMQGQGV 470
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + +S + ++ ++ + M+ IG
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530
Query: 97 ----LM------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE-- 144
+M PN++ +++++ LCN V + F+ ++ G P +T+N + +
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
CL+ K+ + M+ +P + T ++ + + + + ++ +L + P
Sbjct: 591 CLV--GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ +++L GL + GR S ++ EM++
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMID 678
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 42/225 (18%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + + ++D+ L R M + PT +S LD L ++ +++
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM--------------------- 127
M+ G + ++ Y ++ LC N+ D F ++
Sbjct: 675 EMIDSGTAV--DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732
Query: 128 ---------VF-----HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
+F G P+ TY ++ L+K V E + F M K+ P+
Sbjct: 733 VRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRL 792
Query: 174 CATAITMLLDADEPEFAIEIWNYI--LENGILPLEASANVLLVGL 216
I MLL + ++ Y+ ++ I+ LEAS LL+ L
Sbjct: 793 LNDIIRMLLQKGD---IVKAGYYMSKVDGTIISLEASTTSLLMSL 834
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 39/249 (15%)
Query: 19 VERFEWNPEHVLAYETFLITLIRGKQVDEA-LKFLRVMKGENCFPTLKFFSNALDILVKL 77
+ F P V ++ T L TL++ K+ D L F K P + + + L K
Sbjct: 196 IPSFGLQPS-VRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKK 254
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDS- 136
ND +++ + M +GF +PN++ Y ++G + D+ R F +++ G PD
Sbjct: 255 NDIDAAIRVLEEMPAMGF--IPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPT 312
Query: 137 ----------------------------------LTYNMIFECLIKNKKVHEVENFFHEM 162
+TY +I E K KK EV N +M
Sbjct: 313 TYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDM 372
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ ++ P+ C I ML + + E A E+W +L+ P A + L+ L G++
Sbjct: 373 LEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKV 432
Query: 223 SDVRRFAEE 231
+ R+ +E
Sbjct: 433 WEARKLFDE 441
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 5/243 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G++V A + FGE+++R W P+ Y + + + +A+K + M+
Sbjct: 285 GYVSKGDMVGARRVFGEILDR-GWVPDPT-TYTILMDGYCKKGRFMDAVKVMDEMEENRV 342
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ K S + L D M+ + +P+ + V+ +LC V+
Sbjct: 343 EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKY--IPSSALCCRVIDMLCEEGKVEVA 400
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +++ PD+ + + L K KV E F E K P+ L I
Sbjct: 401 CELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSI-PSTLTYNALIAG 459
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ + E A +W+ ++E G +P + N+L+ G +G + R EEML+ L
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519
Query: 241 DVT 243
T
Sbjct: 520 KAT 522
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 33 ETFLITLIR-----GKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
E IT+IR G+ FLR+ P+++ F+ L+ LV+ N V L
Sbjct: 170 ENLFITVIRNYGFAGRPKLAIRTFLRI-PSFGLQPSVRSFNTLLNTLVQ-NKRFDLVHLM 227
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
F ++PN+ N +V LC ND+D R ++M G P+ +TY I +
Sbjct: 228 FKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYV 287
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA--DEPEF--AIEIWNYILENGIL 203
+ F E++ W P P T T+L+D + F A+++ + + EN +
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDP----TTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
P + + V++ + +V ++ML ++ +
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLIKNKKVH 153
F L P++ +N ++ L N D V F G P+ T N++ + L K +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
EM + P + T + + + A ++ IL+ G +P + +L+
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
G GR D + +EM R+ DVT + +A+ E +S
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS 362
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 6/226 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K G E + F M +R F + AY + + +VD+A + L MK ++
Sbjct: 68 GLTKAGQARETSSIFHAMKQRGFALDAR---AYNAVVDGFCKSGKVDKAYEALEEMKVKH 124
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PT+ + + +D L K++ L++ G L N+I+Y++++ +D
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL--NVIVYSSLIDGFGKVGRIDE 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ ++M+ G P+ T+N + + L+K ++++E F M + + P + I
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
L + A W + + G++P + ++ GL +G ++D
Sbjct: 243 GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDA 288
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM + + P V Y + + L + ++DEA K +
Sbjct: 103 GFCKSGKVDKAYEALEEM--KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGI 160
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + M+ G L PN+ +N+++ L +++
Sbjct: 161 ELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG--LAPNVYTWNSLMDALVKAEEINEA 218
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P++ TY+++ L + +K ++ F+ EM K P + T I+
Sbjct: 219 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISG 278
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
L A ++ NG +P AS N L+ G+ + R + EE
Sbjct: 279 LAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEE 329
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 72/190 (37%), Gaps = 2/190 (1%)
Query: 46 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYN 105
++ K + M C P L + +D + K D +++ + G GF +P++ Y+
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF--LPDVRSYS 63
Query: 106 AVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
++ L F M G D+ YN + + K+ KV + EM
Sbjct: 64 ILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVK 123
Query: 166 EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
PT + I L D + A ++ GI + L+ G +GR+ +
Sbjct: 124 HVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 183
Query: 226 RRFAEEMLNR 235
EEM+ +
Sbjct: 184 YLILEEMMKK 193
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 61/158 (38%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P+L + N + + DV+ F+ + +G PD +Y+++ L K + E +
Sbjct: 22 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSI 81
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
FH M + + + + + + A E + + P A+ ++ GL
Sbjct: 82 FHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAK 141
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ RL + EE ++ I + + L F R
Sbjct: 142 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 35/295 (11%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + NV AN F M + E ++Y + ++VDEALK M +NC
Sbjct: 248 GYCRNKNVDAANAIFLSMPNKGCLRNE--VSYTNLIHGFCEARRVDEALKLFSQMHEDNC 305
Query: 61 FPTLKFFSNALDILVKL--------------------NDSTHTVQLWDIMVGIGFN---- 96
+PT++ ++ + L +L N T+TV + + F+
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKK 365
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
L+P+++ YNA++ C + M + P++ TYN +
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
+ K +H+ + H+M++ + QP + I + A ++ + + E+G++P E
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
+ +V + L G + + R E + + I +V L + + RF
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF 540
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 5/267 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + N+ +A +M+ER + P +V+ Y + + + A K L +M
Sbjct: 423 GFCRGKNIHKAMSLLHKMLER-KLQP-NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL 480
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S +D L K L++ + G + N ++Y+ ++ C V +
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG--IKANEVIYSTLIDGYCKVGKVSDG 538
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D+M+ G P+S+TYN + + K K E MIK + +P I
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
LL DE + A ++++ +L G P + + GRL D +M N + ++
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKM-NAKGIMP 657
Query: 241 DVTMQKLKKAFYNESRSMRDRFDSLER 267
D + L Y S+ F L+R
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKR 684
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 92/250 (36%), Gaps = 3/250 (1%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V+E ++ V+ F++ + Y L+ L R +DE M + P +
Sbjct: 149 VLEMLRSMNRRVDAFKFKLT-LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTL 207
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ ++ KL + +V G +L + Y +++ C N +VD F M
Sbjct: 208 NTMVNGYCKLGNVVEAELYVSKIVQAGLSL--DTFTYTSLILGYCRNKNVDAANAIFLSM 265
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G + ++Y + + ++V E F +M ++ PT I L
Sbjct: 266 PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK 325
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
A+ ++ + E P + VL+ L D ++ ML + ++ VT L
Sbjct: 326 TEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385
Query: 248 KKAFYNESRS 257
+ + S
Sbjct: 386 IDGYCKKGLS 395
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 11/257 (4%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLIT-------LIRGKQVDEALKFLRVMKGEN 59
+V+ K F ++ FE +L L T + R Q A FL M
Sbjct: 90 SVIAKMKRFDVVISLFEQ--MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L F++ L N + L+D +VG+GF PN++ Y ++ LC N +++
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR--PNVVTYTTLIHCLCKNRHLNH 205
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F+QM +G P+ +TYN + L + + + +M+K QP + I
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A E++ +++ + P + L+ GL GRL + R+ M +
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 240 YDVTMQKLKKAFYNESR 256
+VT L F R
Sbjct: 326 NEVTYTTLIHGFCKSKR 342
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
Q +EAL M P++ F+ L ++ K+ + L++ M +G + P L
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGIS--PVLYT 119
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
N V+ +C ++ F +M+ G PD +T+ + ++ + F +++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
++P + T I L A+EI+N + +NGI P + N L+ GL +GR S
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
D +M+ R I +T L AF + M +
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+ A+ G+M+ + + P+ ++ + + L ++++AL + G P
Sbjct: 129 RSSQPCRASCFLGKMM-KLGFEPD-LVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPN 186
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ + L K H V++++ M G + PN++ YN++V LC +
Sbjct: 187 VVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG--IRPNVVTYNSLVSGLCEIGRWSDAAWL 244
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M+ G P+ +T+ + + +K K+ E + + MI+ P I L
Sbjct: 245 LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ A +++ + NG P E + L+ G R+ D + EM + ++ +T
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT 364
Query: 244 MQKLKKAF 251
L + +
Sbjct: 365 YTVLIQGY 372
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 6/234 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + + ++ A++ M P + +++ + L ++ + L
Sbjct: 187 VVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLR 246
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M+ G + PN+I + A++ + + M+ +PD TY + L
Sbjct: 247 DMMKRG--IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E F+ M N + P + T I + E +I+ + + G++ +
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT 364
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKAFYNESRSM 258
VL+ G +GR + +M +RR I Y+V + L Y E M
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 4/229 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G ++EA + + M++ + P+ V Y + L ++DEA + +M+ +P
Sbjct: 269 KVGKIMEAKELYKVMIQMSVY-PD-VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPN 326
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K +++ M G L+ N I Y ++ C D
Sbjct: 327 EVTYTTLIHGFCKSKRVEDGTKIFYEMSQKG--LVANTITYTVLIQGYCLVGRPDVAQEV 384
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F+QM A PD TYN++ + L N V + F M K E + I +
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCK 444
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ E A +++ + G+ P + ++ G G + + ++M
Sbjct: 445 VGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKM 493
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + +Y + + R + +A++ M P ++ +D +K D +
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L D MV G L PN I YN ++ LC + D+M PD TY+++F+
Sbjct: 72 LRDQMVCHG--LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L +N + + F + +KN C+ + L + A E+ ++ G++P
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 189
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI----LIYDVTMQKLKKA 250
N L+ G G L +M +R I + Y+ + L KA
Sbjct: 190 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 131/307 (42%), Gaps = 44/307 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G + A TFG+M R P+H+ Y + L + +++ A L M+
Sbjct: 199 GYCQTGELEGAFSTFGQMKSR-HIKPDHI-TYNALINGLCKAERITNAQDLLMEMQDNGV 256
Query: 61 FPTLKFFSNALD-------------ILVKLNDST----------------------HTVQ 85
PT++ F+ +D +L ++ ++ V
Sbjct: 257 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 316
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ D M +++PN +YNA++ + D F ++M +G P +TYN++ +
Sbjct: 317 ILDDM--FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
L ++ E E + + + P ++ T I+ + A+++ + + GI
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKAFYNESRSMRDR 261
+ + L+ GL GRL+++ ++M+ ++ I+++ ++ K + NE ++ R
Sbjct: 435 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK-YGNEIKAEDLR 493
Query: 262 FDSLERR 268
+ L++R
Sbjct: 494 KEMLQKR 500
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L+P ++YN ++ C +++ F F QM PD +TYN + L K +++ +
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ EM N PT T I + E + + + ENG+ P S ++
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305
Query: 217 RNLGRLSDVRRFAEEMLNRRIL 238
G++ + ++M ++ +L
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVL 327
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ M+ PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + P + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + M+ P + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 3/244 (1%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T L L + + ALK LR+++ + P + ++ +D L K L+
Sbjct: 116 VSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M G + PN+I Y+ ++ C + F ++M+ P+ TY ++ + L K
Sbjct: 176 MDARG--IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKE 233
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
KV E +N M K +P ++ T + E + A ++++ +++ G+ P S
Sbjct: 234 GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRW 269
N+++ L R+ + E+L++ ++ VT L F R + D L+ +
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR-ITSALDLLKEMY 352
Query: 270 KTSQ 273
Q
Sbjct: 353 HRGQ 356
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 8/237 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G A K M+E P +V+ Y T + L + K V+EA M
Sbjct: 124 GLCKIGETRSALKLL-RMIEDRSTRP-NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + +S + L + M I N+ PN+ Y ++ LC V
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEM--ILKNINPNVYTYTILMDALCKEGKVKEA 239
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
M G P+ ++YN + + CLI +V + FH M++ P + I
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLI--GEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L + + A+ + +L ++P + + L+ G LGR++ +EM +R
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A EM R + P V+ Y + L L + + +D+A MK
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQ--PADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ +D L K + +L+ ++ G + N+ YN ++ LC +D
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRI--NVWTYNVMISGLCKEGMLDEA 449
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
+M +G PD++T+ +I L + + + E HEMI +
Sbjct: 450 LAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKD 495
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 100/265 (37%), Gaps = 35/265 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G ++EA EM+ + NP +V Y + L + +V EA L VM E
Sbjct: 194 GFCLAGQLMEAFGLLNEMILK-NINP-NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFN------------------------ 96
P + ++ +D + + + Q++ MV G N
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 97 ---------LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
++PN + Y++++ C + + +M G D +TY + + L
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
KN+ + + F +M + QP I L + A +++ ++L G
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ NV++ GL G L + +M
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKM 456
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 35/236 (14%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G V A + F MV++ NP +V +Y + L + K+VDEA+ LR + +N
Sbjct: 264 GYCLIGEVQNAKQMFHTMVQK-GVNP-NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM 321
Query: 61 FPTLKFFSNALDILVKLNDST----------HTVQLWDIMVGIGF--------------- 95
P +S+ +D KL T H Q D++
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATA 381
Query: 96 --------NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ PN Y A++ LC N + F ++ G + TYN++ L
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLC 441
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
K + E +M +N P + I L + D+ + A ++ + ++ +L
Sbjct: 442 KEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 5/171 (2%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P ++ +N +VG L F QM G PD T N++ C ++
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+++K +QP + T + L E + ++ + ++ G + S LL GL
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 219 LGR----LSDVRRFAEEMLNRRILIYDVTMQKL-KKAFYNESRSMRDRFDS 264
+G L +R + +++Y+ + L K NE+ + D+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ EA G++ R P VL Y T + R ++EA + M + C
Sbjct: 393 GYCKAGNLKEALWLLGDL-RRAGLAPT-VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGC 450
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP + ++ ++ K+ + + +D M+ G L P+ YN + D
Sbjct: 451 FPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG--LQPDCFAYNTRICAELILGDTHKA 508
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F+ + M+ G +PD++TYN+I + L K + + ++ +M+ + QP + I
Sbjct: 509 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHA 568
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
+ A ++ N ++ +G+ P + +L+ G L + +ML+ I
Sbjct: 569 HCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPN 628
Query: 241 DVTMQKLKKAFYNESRSM 258
++T L A R++
Sbjct: 629 EITYNVLIHALCRTGRTL 646
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 4/207 (1%)
Query: 29 VLAYETFLITLIRGKQVDEA-LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
++ Y + L++ +QV+ A LKF M+ P L +++ L+ K + + L
Sbjct: 349 LVTYNAIIHGLLKSEQVEAAQLKFAE-MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLL 407
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ G L P ++ YN ++ C ++ R ++MV G FPD TY ++
Sbjct: 408 GDLRRAG--LAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSH 465
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K + + FF EM+ QP T I L + A ++ ++ GI P
Sbjct: 466 KVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTV 525
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ NV++ GL G L D + +M++
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVS 552
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+L + MV G L P+++ Y ++ C ++ + + +F +M+ G P+ +TYN++
Sbjct: 580 KLLNGMVSDG--LQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF----AIEIWNYILEN 200
L + + + FHEM++ P T+L+D + E AI ++ + +N
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYT----YTLLIDGNCREGNWADAIRLYFEMHQN 693
Query: 201 GILPLEASANVLLVG 215
GI P + N L G
Sbjct: 694 GIPPDYCTHNALFKG 708
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 7/228 (3%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGENCFPTLKFF 67
+ + EM++ E P ++ Y T L + ++ + DEA L+ M +G C +
Sbjct: 226 DVRAVYREMLQ-LEIEPT-IVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTY 283
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
+ + L + + +L D M + + YN ++ L V V +M
Sbjct: 284 NVVISFLAREGHLENAAKLVDSMR---LSKKASSFTYNPLITALLERGFVQKVEALQMEM 340
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEP 187
G P +TYN I L+K+++V + F EM P + + + A
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400
Query: 188 EFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ A+ + + G+ P + N L+ G LG L + RR EEM+ +
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQ 448
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
+MP L+ YNA++ L + V+ F +M G PD +TYN + K + E
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
++ + PT L T I E A + ++E G P + +L+ G
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463
Query: 216 LRNLGRLSDVRRFAEEMLNR 235
+ L R F +EML++
Sbjct: 464 SHKVRNLPMAREFFDEMLSK 483
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNVV+ G V+ + P L L K+ +A+ LR M
Sbjct: 111 GFAALGNVVKK----GFRVDAITFTP--------LLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P + ++N L L N S ++L +M G P+++ YN V+ D D
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + +M+ G PD +TY+ I L K + + + + M+KN P + + +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ +P+ AI + +G+ P + + L+ L GR ++ R+ + M R
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R P+H + + + + ++VD+A+ M+
Sbjct: 350 GYATKGALVEMHALLDLMV-RNGIQPDHHV-FNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D+L K + ++ M+ G L PN+I+Y +++ LC + D
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG--LTPNIIVYTSLIHGLCTCDKWDKA 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G +++ +N I + K +V E E F M++ +P + T I
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
A + + A ++ ++ G+ P + L+ G + R+ D +EM++
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 586 IITYNIILQGL 596
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVM---KGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
V +Y L L + EAL+ L +M +G P + ++ L+ K DS
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ G ++P+++ Y++++ LC +D + MV +G PD +TYN I
Sbjct: 223 TYHEMLDRG--ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + E +M + +P + ++ + L A +I++ + + G+ P
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ LL G G L ++ + M+ I
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 14/239 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG+ +A T+ EM++R P+ V+ Y + + L + + +D+A++ L M
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGIL-PD-VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L + M G PN++ Y++++ LC N
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE--PNVVTYSSLMNYLCKNGRSTEA 325
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP-----LNCA 175
+ FD M G PD TY + + + E+ M++N QP L CA
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A ++ + A+ +++ + ++G+ P ++ L G + D + E+M++
Sbjct: 386 YA-----KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G+V +A F +M++ E +++ Y + + L + D+A + L ++ C
Sbjct: 423 KSGSVDDAMLYFEQMID--EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I YN ++ C +D +
Sbjct: 481 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYNTLIDGCCLAGKMDEATK 537
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TY + + ++ + F EM+ + P + + L
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I ++G ++ N++L GL
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 12/238 (5%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+R +P V++Y T L + D+A M P + +S+ + L K
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQA 251
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+++ + MV G +MP+ + YN+++ C++ +M G P+ +TY
Sbjct: 252 MDKAMEVLNTMVKNG--VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE---IWNY 196
+ + L KN + E F M K +P + AT T+L +E + +
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEP---DIATYRTLLQGYATKGALVEMHALLDL 366
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
++ NGI P N+L+ ++ + + LN ++ Y + L K+
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 39/201 (19%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+E+ K F MV R P+ ++ Y T + ++DEA K L M P
Sbjct: 493 KEGRVIESEKLFDLMV-RIGVKPD-IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG-------------- 109
+ + ++ +++ + L+ MV G + PN+I YN ++
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVS--PNIITYNIILQGLFHTRRTAAAKEL 608
Query: 110 ---------------------LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
LC NN D R F + ++ T+N++ L+K
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
++ E ++ F N P
Sbjct: 669 CGRMDEAKDLFAAHSANGLVP 689
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 24/255 (9%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
EK+ + TFG ++ N A+ F + GKQ+D
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD---------------- 438
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S+ ++ L + V++++ M G PN +YNA++ C + R
Sbjct: 439 -VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK--PNSHIYNALISGFCQVYRTSDAVR 495
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+ +M +G P +TYN + + L K +K E + EM++N + P + I L
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR-----I 237
+ + A+ IW IL G+ N+L+ GL + G++ + +M ++ +
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Query: 238 LIYDVTMQKLKKAFY 252
+ Y+ M L + Y
Sbjct: 616 VTYNTLMDGLYETGY 630
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y L +L +D A+ ++ P +S + L K + H + L D M
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH-GAFPDSLTYNMIFECLIKNK 150
G + P+++ YNA++G + + V R +D++V GA P+ TYN++ + L K
Sbjct: 221 RSG--VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ EV + M+ N QP + I L + + + A +++ I++ G++ A N
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 211 VLLVGLRNLGRLSDVRRF 228
L+ G GR+ + +F
Sbjct: 339 SLVKGFCQAGRVQEAWKF 356
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 6 GNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 65
G +V+A K + +M + H+ Y + + + +A++ M C PT+
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHI--YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510
Query: 66 FFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFD 125
++ +D L K + MV GF P++ Y +++ L ++ +D+ +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFT--PDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 126 QMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDAD 185
Q+++ G D + +N++ L KV E + F +M E + P N T T++
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM--KEKKNCPPNLVTYNTLMDGLY 626
Query: 186 EPEF---AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
E + A +W I E+G+ P S N + GL + R+ + + +E+L+R I+ +
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVI 686
Query: 243 TMQKLKKA 250
T L +A
Sbjct: 687 TWNILVRA 694
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 41 RGKQVDEALKFLRVMKG-ENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV--GIGFNL 97
R D AL R + C P ++ + LD V+ + + + G +
Sbjct: 95 RAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRI 154
Query: 98 MPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVEN 157
PNL YN V+ LC D+D FD + PD +TY+ + L K ++ +
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214
Query: 158 FFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
EM ++ QP + + A E E + +W+ ++++ G P A+ NV+L GL
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274
Query: 217 RNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
GR +V E M L ++ Y + + L ++
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL-RVMKGEN 59
G K+ + A EM R P+ V+ Y L + + ++ ++ +++K
Sbjct: 202 GLAKQDRLDHALDLLDEM-PRSGVQPD-VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG 259
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P L ++ LD L K ++W+ MV NL P++I Y ++ LC + DVD
Sbjct: 260 ARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA--NNLQPDVITYGILIHGLCRSGDVDG 317
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT--- 176
R + +++ G D+ YN + + + +V E F+ + N T
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR----NLRTYNI 373
Query: 177 AITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGL 216
I L D+ + AIE+W+ + ++ +P + L+ GL
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMK-GENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
V+ + + L +VDEAL MK +NC P L ++ +D L + LW
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ G L P++I YN + LC+ + + + D+++ G P +T+N++ +I
Sbjct: 639 TSITEDG--LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696
Query: 148 KNKKVH 153
K +
Sbjct: 697 KYGPIQ 702
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 102/264 (38%), Gaps = 20/264 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF--------L 52
G + G+V A + + E+++ + Y + + + +V EA KF L
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAM--YNSLVKGFCQAGRVQEAWKFWDSAGFAGL 365
Query: 53 RVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLC 112
R ++ N F S +D ++LWD++ +P+ + + ++ LC
Sbjct: 366 RNLRTYNIMIKGLFDSGMVD---------EAIELWDLLEK-DVACIPDTVTFGTLIHGLC 415
Query: 113 NNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
N + F F++ G D +Y+ + L ++ + + +M K+ +P
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
I+ A+ I++ + +NG P + N L+ GL + + A EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 233 LNRRILIYDVTMQKLKKAFYNESR 256
+ T L + +++ +
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKK 559
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 21/244 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW KEG + +A ++ EM E +++ T + L R ++DEA ++ M
Sbjct: 587 GWCKEGMLDKAFSSYFEMTE--NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644
Query: 61 FPTLKFF-------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCN 113
FP + F + I L++S T L+PN I+YN + LC
Sbjct: 645 FPDHECFLKSDIRYAAIQKIADSLDESCKTF------------LLPNNIVYNIAIAGLCK 692
Query: 114 NNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLN 173
VD+ RFF + G PD+ TY + V E EM++ P +
Sbjct: 693 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 752
Query: 174 CATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
I L ++ + A +++ + + G+ P + N L+ G +G + + ++M+
Sbjct: 753 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812
Query: 234 NRRI 237
I
Sbjct: 813 EEGI 816
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G+V A M E+ +V+ Y + + ++DEA K LR M+ E
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEK--GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAA 293
Query: 61 F-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + + +D + V+L D M+ +G L NL + N+++ C ++
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG--LKTNLFICNSLINGYCKRGEIHE 351
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+MV PDS +YN + + + E N +M++ +PT L T +
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
L + A++IW+ +++ G+ P E + LL GL
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 3/232 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + EA K M E P+ AY + R ++D+A++ L M
Sbjct: 271 GYCKQCKMDEAEKVLRGMQEEAALVPDE-RAYGVLIDGYCRTGKIDDAVRLLDEMLRLG- 328
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
T F N+L H + I + +NL P+ YN ++ C
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAE-GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M+ G P LTYN + + L + + +H M+K P + +T +
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + E A +W IL G + N ++ GL +G++ + ++M
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 499
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 5/174 (2%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L+P+ Y ++ C +D+ R D+M+ G + N + K ++HE E
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 353
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
M+ +P + T + A + + +L+ GI P + N LL GL
Sbjct: 354 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+G D + M+ R + +V L + + F+ WK
Sbjct: 414 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK-----MENFEGASTLWK 462
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 34/231 (14%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
+ + T + L + ++ EA + MK C P + +D K ++ ++
Sbjct: 474 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 533
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M + P++ MYN+++ L + + V +M G P+ +TY + + K
Sbjct: 534 MEREPIS--PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 591
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP----- 204
+ + + + EM +N + C+T ++ L + A + ++++G P
Sbjct: 592 GMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 651
Query: 205 ----------------LEASA-----------NVLLVGLRNLGRLSDVRRF 228
L+ S N+ + GL G++ D RRF
Sbjct: 652 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 702
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 22/243 (9%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A+ F + V + + +V +Y + L RG+ DE +L N
Sbjct: 50 ASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL----------------NQ 93
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
L L K D + + WD +VG+ + +++ ++ + N FD M
Sbjct: 94 LVDLCKFKDRGNVI--WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 151
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P + N + L+KN + H + +MI+ P + + + + A
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRR----FAEEMLNRRILIYDVTMQK 246
+ G+ P + + L+ G +LG + + +E+ ++R ++ Y + ++
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271
Query: 247 LKK 249
K
Sbjct: 272 YCK 274
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
PT+ F L + V+ + + + ++D M G +P+L N+++ L N +
Sbjct: 122 PTV--FDMILKVYVEKGLTKNALYVFDNMGKCG--RIPSLRSCNSLLNNLVKNGETHTAH 177
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
+ QM+ G PD +++ K+ KV E F +M +P + + I
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + E A + ++ E G+ + +L+ G ++ + + M L+ D
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 297
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG++ +A + + +M++ E VL Y + + V EA + + M
Sbjct: 366 GFCNEGSIGDAKRVYDQMIK--EGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGY 423
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FPT F+ + ++L + MVG G +P++ Y+ +V LCN D
Sbjct: 424 FPTAPTFNALISAFCGQGKVGSALKLMEDMVGRG--CLPDMGSYSPMVDALCNKGDFQKA 481
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
R F QMV PD T+N + CL + E +N FH
Sbjct: 482 VRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFH 521
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST--HTVQ 85
+ Y + + L + Q +EAL+FL M E FP + +L IL N+ + +
Sbjct: 323 RISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFP--RAVDRSLRILGFCNEGSIGDAKR 378
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++D M+ G +P++++Y ++ C + +V F ++MV HG FP + T+N +
Sbjct: 379 VYDQMIKEGG--VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISA 436
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
KV +M+ P + + + L + + + A+ ++ ++E ILP
Sbjct: 437 FCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPD 496
Query: 206 EASANVLLVGL 216
++ N +L+ L
Sbjct: 497 YSTWNSMLLCL 507
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 10/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE- 58
G+ G + A F +M + WN + Y+T + L G ++++ K L +M+
Sbjct: 261 GYCDSGMLDSAIDLFNDMKTDGINWN---FMTYDTLIRGLCSGGRMEDGFKILELMEESR 317
Query: 59 -NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ +++ + L K N ++ M L P + + + CN +
Sbjct: 318 GGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME----KLFPRAVDRSLRILGFCNEGSI 373
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ R +DQM+ G P L Y + ++ V E +EM+ + + PT
Sbjct: 374 GDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNAL 433
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+ + A+++ ++ G LP S + ++ L N G R +M+ + I
Sbjct: 434 ISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 493
Query: 238 L 238
L
Sbjct: 494 L 494
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 33 ETFLITLIRG----KQVDEALKFLRVMK--GENCFPTLKFFSNALDILVK--LNDSTHTV 84
E+ +T++RG + V + +K L ++ GEN P+LK F++ LD+LVK ++ +
Sbjct: 11 ESIFVTIVRGLGRARMVRQMIKVLDLITKFGEN--PSLKIFNSILDVLVKEDIDLAREFY 68
Query: 85 QLWDIMVGI-GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+ +M G+ G + ++M LC N + + F+ M G P+++ YN +
Sbjct: 69 RKKMMMNGVSGDDYTFGILMKG-----LCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L KN KV + +EM+ +P+ + I+ + A+ + G +
Sbjct: 124 HALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179
Query: 204 PLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
P +A ++ L GR+++ E + + ++ V L K F
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGF 227
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 116/271 (42%), Gaps = 8/271 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+++ ++ + EM++R F+ N + Y + + + L+ + M+
Sbjct: 227 GFKESSDITSVELFYHEMIKRGFKPN---AVTYSIRIDAYCKKGCFVDGLRVFKEMERAK 283
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C PTL+ + + + D T QL+D + NL P++ YNA++ L + DV +
Sbjct: 284 CEPTLETITTLIHGAGIVKDKTKARQLFDEIPLR--NLCPDIGAYNALISSLIRSGDVKS 341
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
+ M DS+TY+M+F LI+ + V + +M+ + P +
Sbjct: 342 AASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMK 401
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + + W Y++E G P ++L+ GL G + +++ML R +
Sbjct: 402 FFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQM 461
Query: 240 YDVTMQKLKKAFYNESRSMRDRFDSLERRWK 270
+ +++ + D+++ LER K
Sbjct: 462 SEAAFLIMERCLLKAHAT--DKYEELERLRK 490
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFP-TLKFFSNALDILVKLNDSTHTVQLW-- 87
A+E L L R + D++ + +R ++ + F TLK S L + K T++ +
Sbjct: 112 AFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQR 171
Query: 88 ---DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL-TYNMIF 143
++ VG F +N ++ C + F +M + FP ++ T N++
Sbjct: 172 MENEVFVGRKFGTEE----FNVLLRAFCTQRQMKEARSVFHKM--YSRFPPNIKTINLLL 225
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQP 169
++ + VE F+HEMIK ++P
Sbjct: 226 LGFKESSDITSVELFYHEMIKRGFKP 251
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 5/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G ++G+V A + M + F P+ ++ Y T L L Q ++A + + M +C
Sbjct: 130 GMCEQGHVDSALELLSNM-QSFGCKPD-IVTYNTLLKGLCSADQWEDAEELMIKMSQNDC 187
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P F+ + L + +++ M G N PN Y+ ++G L ++
Sbjct: 188 LPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCN--PNSTTYSTIIGGLAKAGKMEQA 245
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M G D + Y ++ E L K K+ EV H++ + P + T + +
Sbjct: 246 LELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLV 304
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L + ++AI++ ++ G +P E + +L+ GL G L + R + +R +L
Sbjct: 305 LCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVL 362
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
+EG+V +A + + R P V Y T L L ++ +A + L M ENC P
Sbjct: 28 REGDVDQARELLNSLPSRG-CKPNTV-NYNTVLKGLCSIERWVDAEELLDEMVRENCPPN 85
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L + + + M G N++ YNAV+ +C VD+
Sbjct: 86 EATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCT--ANVVTYNAVISGMCEQGHVDSALEL 143
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
M G PD +TYN + + L + + E +M +N+ P + T I+ L
Sbjct: 144 LSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQ 203
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A E++ + E G P + + ++ GL G++ EM ++
Sbjct: 204 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASK 255
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 49 LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV 108
++ + +M+ E C P + ++ +D + + D +L + + G PN + YN V+
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCK--PNTVNYNTVL 58
Query: 109 GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
LC+ + D+MV P+ T N+I L + + +V + +M K+
Sbjct: 59 KGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCT 118
Query: 169 PTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
+ I+ + + + A+E+ + + G P + N LL GL + + D
Sbjct: 119 ANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEEL 178
Query: 229 AEEMLNRRILIYDVT 243
+M L +VT
Sbjct: 179 MIKMSQNDCLPDNVT 193
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 4/193 (2%)
Query: 9 VEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 68
V+A + EMV E P + + TL R + + ++L M C + ++
Sbjct: 68 VDAEELLDEMVR--ENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYN 125
Query: 69 NALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMV 128
+ + + ++L M G P+++ YN ++ LC+ + ++ +M
Sbjct: 126 AVISGMCEQGHVDSALELLSNMQSFGCK--PDIVTYNTLLKGLCSADQWEDAEELMIKMS 183
Query: 129 FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPE 188
+ PD++T+N I L + + + F +M + P +T I L A + E
Sbjct: 184 QNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKME 243
Query: 189 FAIEIWNYILENG 201
A+E+ N + G
Sbjct: 244 QALELLNEMASKG 256
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M+ P
Sbjct: 148 KEGEIRLAQSVF-DAITKWSLRPS-VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N VD
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNG--LVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ D +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ +KL D +L + M G + P++ Y+ ++ LC + +D+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG--VQPDVYTYSVLINGLCKESKMDDAN 226
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ +G P+ +T+ + + KN +V + +M+ + T I L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 286
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
+ + A ++ + + G+ P + + L+ G G L + + M+ I + D
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 347 VAYTALISGLCQEGRSV 363
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 49 LKFLRVMKG------ENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNL 101
LK+ +++ G E +P +L FF+ + VK + ++D + ++L P++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSV 171
Query: 102 IMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHE 161
+ +N ++ D+D FR + M G PD TY+++ L K K+ + F E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231
Query: 162 MIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGR 221
M+ N P + T I + A+EI+ +L + + N L+ GL G
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGD 291
Query: 222 LSDVRRFAEEM 232
L + +EM
Sbjct: 292 LKQAQDLIDEM 302
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 21/270 (7%)
Query: 6 GNVVEAN-KTFGEMVERF-----EWNPEHVLA-------------YETFLITLIRGKQVD 46
GN VE N +T+G ++ F E +LA + T + R VD
Sbjct: 310 GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 369
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
+ALK M+ + ++ L ++N L IM+ +G ++PN + Y
Sbjct: 370 DALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG--VVPNYVTYTT 427
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++ + C + D+ R F +M GA P +TYN++ + K + E E F EM K
Sbjct: 428 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKG 487
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
+ P A+ + + + A++++ + + G P + L+ GL GR
Sbjct: 488 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF 547
Query: 227 RFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+ ++ML ++ D L + + ++R
Sbjct: 548 QLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 4/205 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + R + A K L G P + + ++ K+ L
Sbjct: 282 VYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 341
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G G L N I++N ++ C VD+ + M G D TYN + L +
Sbjct: 342 DMQGQGVGL--NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR 399
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITM-LLDADEPEFAIEIWNYILENGILPLEA 207
++ E + H MI+ P + T I++ D D E A ++ + E G P
Sbjct: 400 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVE-ARRLFREMAEKGATPSVV 458
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEM 232
+ NV++ G G + + RF +EM
Sbjct: 459 TYNVMIDGYTKKGSIREAERFRKEM 483
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ EA + EM E+ + P+ V Y + + +VD ALK MK
Sbjct: 466 GYTKKGSIREAERFRKEM-EKKGFVPD-VYTYASLVHGHCVNGKVDVALKLFEEMKQRGT 523
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + ++ + L K S QL+D M+ G L+P+ +Y+A+VG L +N D
Sbjct: 524 EPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG--LIPDDSLYSALVGSLHTDNRKD 579
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+G++VEA + F EM E+ V+ Y + + + EA +F + M+ + P
Sbjct: 434 KDGDMVEARRLFREMAEK--GATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPD 491
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ + ++L++ M G PN++ Y A++ L + F+
Sbjct: 492 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE--PNVVAYTALISGLAKEGRSEAAFQL 549
Query: 124 FDQMVFHGAFPDSLTYNMIFECL 146
+D M+ G PD Y+ + L
Sbjct: 550 YDDMLKAGLIPDDSLYSALVGSL 572
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ VV LC + VD+ R D M HG ++L YN + +C ++ K V+ E+++
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL-EIME 239
Query: 165 NEW 167
NE
Sbjct: 240 NEG 242
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE N+ A M++ HV Y T + L+ + ++A++ R M +C
Sbjct: 112 GLCKEANLDRAVSVLNGMIKSGCKPNVHV--YNTLINGLVGASKFEDAIRVFREMGTMHC 169
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ ++ ++ K L ++ G + P +I Y+ ++ LC ++ V+
Sbjct: 170 SPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLD--PGVITYSMLMEGLCFDHKVERA 227
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP--LNCATAI 178
+ ++Q+ G PD +N++ L K+ + + +M N W+ P ++ T +
Sbjct: 228 LQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDM--NRWKCAPNLVSHNTLM 285
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
+ A+ IW IL NG+ P S N+ L GL + R+SD F + + ++I+
Sbjct: 286 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIV 345
Query: 239 I 239
+
Sbjct: 346 L 346
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE KE VE + T+G +V F + +D++L L + + +
Sbjct: 56 WELMKESGFVEDSITYGILVHGF-----------------CKNGYIDKSLHVLEMAEQKG 98
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
+S ++ L K + V + + M+ G PN+ +YN ++ L + ++
Sbjct: 99 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCK--PNVHVYNTLINGLVGASKFED 156
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M P +TYN + KNK E N E++ P + + +
Sbjct: 157 AIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLME 216
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN + G P N+L+ GL ++G++ +M +
Sbjct: 217 GLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAP 276
Query: 240 YDVTMQKLKKAFYNES 255
V+ L + FY +
Sbjct: 277 NLVSHNTLMEGFYKDG 292
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A M++ HV Y + LI + ++A++ R M +C
Sbjct: 138 GLCKETKLEKAVSVLNGMIQSGCKPNTHV--YNALINGLIGASKSEDAIRVFREMGFPHC 195
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ +S ++ L K + L M+ G L P++I Y+ ++ LC + V+
Sbjct: 196 SPTIVTYSILINGLCKSERFSEAYDLVKEMLEKG--LTPSVITYSLLMKGLCLGHKVEMA 253
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++Q+ G PD +N++ L K + + +M N W +P N T T+
Sbjct: 254 LQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDM--NRWNCSP-NLVTHNTL 310
Query: 181 L----LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRR 236
+ D D A+ +W IL+N + P S N+ L GL + R+SD F + + ++
Sbjct: 311 MEGFYKDGD-IRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKK 369
Query: 237 ILIYDVT 243
I +T
Sbjct: 370 IFPTKIT 376
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 2 WE--KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
WE K+G VE + T+G +V F N + I +G+ D AL + ++ G
Sbjct: 82 WELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXD-ALAYXPMING-- 138
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
L K V + + M+ G PN +YNA++ L + ++
Sbjct: 139 --------------LCKETKLEKAVSVLNGMIQSGCK--PNTHVYNALINGLIGASKSED 182
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R F +M F P +TY+++ L K+++ E + EM++ P+ + + +
Sbjct: 183 AIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMK 242
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
L + E A+++WN + + G P N+L+ GL ++ + +M
Sbjct: 243 GLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSP 302
Query: 240 YDVTMQKLKKAFYNES 255
VT L + FY +
Sbjct: 303 NLVTHNTLMEGFYKDG 318
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 7/170 (4%)
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
+LW++M G ++ +N ++ L +N VD V ++ M G DS+TY ++
Sbjct: 46 ELWEMM---GKEGSRSVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVH 102
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
KN +++ + + L I L + E A+ + N ++++G P
Sbjct: 103 GFCKNGYINKSLHLLEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKP 162
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA 250
N L+ GL + D R EM + I+ Y + + L K+
Sbjct: 163 NTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKS 212
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNVV+ G V+ + P L L K+ +A+ LR M
Sbjct: 111 GFAALGNVVKK----GFRVDAITFTP--------LLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P + ++N L L N S ++L +M G P+++ YN V+ D D
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + +M+ G PD +TY+ I L K + + + + M+KN P + + +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ +P+ AI + +G+ P + + L+ L GR ++ R+ + M R
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R P+H + + + + ++VD+A+ M+
Sbjct: 350 GYATKGALVEMHALLDLMV-RNGIQPDHHV-FNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + +D+L K + ++ M+ G L PN+I+Y +++ LC + D
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG--LTPNIIVYTSLIHGLCTCDKWDKA 465
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G +++ +N I + K +V E E F M++ +P + T I
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
A + + A ++ ++ G+ P + L+ G + R+ D +EM++
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 586 IITYNIILQGL 596
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVM---KGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
V +Y L L + EAL+ L +M +G P + ++ L+ K DS
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ G ++P+++ Y++++ LC +D + MV +G PD +TYN I
Sbjct: 223 TYHEMLDRG--ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
+ + E +M + +P + ++ + L A +I++ + + G+ P
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Query: 206 EASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
A+ LL G G L ++ + M+ I
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG+ +A T+ EM++R P+ V+ Y + + L + + +D+A++ L M
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGIL-PD-VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L + M G PN++ Y++++ LC N
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE--PNVVTYSSLMNYLCKNGRSTEA 325
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTP-----LNCA 175
+ FD M G PD TY + + + E+ M++N QP L CA
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
A +D A+ +++ + ++G+ P ++ L G + D + E+M++
Sbjct: 386 YAKQEKVDQ-----AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G+V +A F +M++ E +++ Y + + L + D+A + L ++ C
Sbjct: 423 KSGSVDDAMLYFEQMID--EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ +D K + +L+D+MV IG P++I YN ++ C +D +
Sbjct: 481 TI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVK--PDIITYNTLIDGCCLAGKMDEATK 537
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
MV G PD +TY + + ++ + F EM+ + P + + L
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I ++G ++ N++L GL
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 12/238 (5%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+R +P V++Y T L + D+A M P + +S+ + L K
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQA 251
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+++ + MV G +MP+ + YN+++ C++ +M G P+ +TY
Sbjct: 252 MDKAMEVLNTMVKNG--VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIE---IWNY 196
+ + L KN + E F M K +P + AT T+L +E + +
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEP---DIATYRTLLQGYATKGALVEMHALLDL 366
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
++ NGI P N+L+ ++ + + LN ++ Y + L K+
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 39/201 (19%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+E+ K F MV R P+ ++ Y T + ++DEA K L M P
Sbjct: 493 KEGRVIESEKLFDLMV-RIGVKPD-IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVG-------------- 109
+ + ++ +++ + L+ MV G + PN+I YN ++
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVS--PNIITYNIILQGLFHTRRTAAAKEL 608
Query: 110 ---------------------LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
LC NN D R F + ++ T+N++ L+K
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 149 NKKVHEVENFFHEMIKNEWQP 169
++ E ++ F N P
Sbjct: 669 CGRMDEAKDLFAAHSANGLVP 689
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN------------ALDILV 75
+++ Y T + + +V+ A K + +K + PTL+ F + A+D+L+
Sbjct: 242 NIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLL 301
Query: 76 ---KLNDSTHTVQLW----DIMVGIGFNLM--------------PNLIMYNAVVGLLCNN 114
K + VQ++ D +GF++ P+L+ YN ++ C+
Sbjct: 302 LEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSR 361
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+V+ + +Q + G P+ LTY + K + + ++ EM + + ++
Sbjct: 362 GEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISY 421
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
I L+ A E + A+ I + ++ GILP NVL+ GL G+LS + EML+
Sbjct: 422 GALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLD 481
Query: 235 RRI 237
+ I
Sbjct: 482 QNI 484
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 92/230 (40%), Gaps = 2/230 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + ++ A L M +N P ++ +D ++ + +L+ +++
Sbjct: 456 YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLII 515
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G + P ++ YN ++ + +DN D+M PD T++ I + +K
Sbjct: 516 EKGLD--PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
++ V F M+K +P + + I E + A ++++ + +G+ P + ++
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSI 633
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR 261
L+ +L + E ML + D L F N + R
Sbjct: 634 LIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSR 683
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 4/222 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G ++A T EM E P+ ++ Y T + +V+EA K L P
Sbjct: 325 KLGFDIKAKDTLKEMSENC-CEPD-LVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPN 382
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K + T M G + ++I Y A++ L +VD
Sbjct: 383 KLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEV--DMISYGALIHGLVVAGEVDTALTI 440
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D+M+ G PD+ YN++ L K K+ + EM+ P AT + +
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ A +++ I+E G+ P NV++ G G + +
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNA 542
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 2/225 (0%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
+ T + R VD+ALK M+ + ++ L ++N L IM+
Sbjct: 146 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 205
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+G ++PN + Y ++ + C + D+ R F +M GA P +TYN++ K
Sbjct: 206 EMG--VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGS 263
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ E E F EM K + P A+ + + + A++++ + + G P +
Sbjct: 264 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 323
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL GR + ++ML ++ D L + + ++R
Sbjct: 324 LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 368
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 98/262 (37%), Gaps = 40/262 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEH-----VLAYETFLITLIRGKQVDEALKFLRVM 55
G K G V +A + +M P H L Y + L +R K + L +M
Sbjct: 23 GLCKSGRVDDARRLLDDM-------PRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 75
Query: 56 KGEN---------CFPTLKFFSNALDILVKLNDSTHTV---------------QLWDIMV 91
+ E C K + V+ N+ T+ V L M
Sbjct: 76 ENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 135
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G G L N I++N ++ C VD+ + M G D TYN + L + +
Sbjct: 136 GQGVGL--NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNR 193
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITM-LLDADEPEFAIEIWNYILENGILPLEASAN 210
+ E + H MI+ P + T I++ D D E A ++ + E G P + N
Sbjct: 194 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVE-ARRLFREMAEKGATPSVVTYN 252
Query: 211 VLLVGLRNLGRLSDVRRFAEEM 232
V++ G G + + RF +EM
Sbjct: 253 VMIHGYAKKGSIREAERFRKEM 274
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+ VV LC + VD+ R D M HG ++L YN + +C ++ K V+ E+++
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL-EIME 76
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
NE + T P ++ + + NG+ P E + VL+ G +G++
Sbjct: 77 NEGIEATVGDGTC------GGPP----KVLDECVGNGVEPNERTYGVLINGFCKIGQME- 125
Query: 225 VRRFAEEML 233
A EML
Sbjct: 126 ----AAEML 130
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ EA + EM E+ + P+ V Y + + +VD ALK MK
Sbjct: 257 GYAKKGSIREAERFRKEM-EKKGFVPD-VYTYASLVHGHCVNGKVDVALKLFEEMKQRGT 314
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + ++ + L K S QL+D M+ G L+P+ +Y+A+VG L +N D
Sbjct: 315 EPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG--LIPDDSLYSALVGSLHTDNRKD 370
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 18/252 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + +A M +R P+ Y T + ++ +D A K R M C
Sbjct: 528 GYCKFGMMKDAMACINRMKKR-HLAPDE-FTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 585
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ ++ + D +++++ M G L+PN++ Y+ ++G C + +
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG--LVPNVVTYSILIGSFCKEAKLIDA 643
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKN------KKVHEVE--------NFFHEMIKNE 166
FF++M+ + P+ +T+N + KN +K +E + NFF MI +
Sbjct: 644 ASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDG 703
Query: 167 WQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVR 226
W P + + L A+++ N + G +P S LL G+ GR + +
Sbjct: 704 WAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWK 763
Query: 227 RFAEEMLNRRIL 238
LN R L
Sbjct: 764 NIVSCNLNEREL 775
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 4/238 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G++ AN F E+ + + V Y + + + L M
Sbjct: 248 GYCKKGDMEMANGLFIEL--KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ ++ +D K V+ + M+ G P+++ YN ++ C + V
Sbjct: 306 TVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK--PDIVTYNTLISGSCRDGKVSEA 363
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +Q + G P+ +Y + K N+ EM + +P + +
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
L+ A E + A+ I +LE G+ P N+L+ GL +L + EML++ +L
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y + L + ++ A L M ++ P ++ +D ++ + +L+++ +
Sbjct: 452 YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTI 511
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G N P ++ YNA++ C + + ++M PD TY+ + + +K
Sbjct: 512 EKGMN--PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ + F EM+K + +P + + I + +++I+ + G++P + ++
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629
Query: 212 LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY-NESRSMRDR 261
L+ +L D F EEML + + DVT L F N +R++ ++
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK 680
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 4/234 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G++V+A +T M+E P+ ++ Y T + R +V EA + L G+ P
Sbjct: 321 KHGHIVKAVETIEGMIE-CGCKPD-IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN 378
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ + K M G P+L+ Y A+V L +VD
Sbjct: 379 KFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK--PDLVTYGALVHGLVVAGEVDVALTI 436
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M+ G FPD+ YN++ L K K+ + EM+ P AT + +
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ A +++ +E G+ P N ++ G G + D M R +
Sbjct: 497 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 59/162 (36%)
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
G +PN+I YN ++ C D++ F ++ G P TY I K
Sbjct: 232 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 291
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
++ EM T I A+E ++E G P + N L+
Sbjct: 292 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G G++S+ + E+ L + ++ + L A+ +
Sbjct: 352 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 116 DVDNVFRFFDQMVFHGAFP---DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
DV+ +FFD V G + + Y+ + + L +++ E+E M E PT
Sbjct: 72 DVELGLKFFD-WVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTRE 130
Query: 173 NCATAITMLLDADEPEFAIEIWNYILEN-GILPLEASANVLLVGLRNLGRLSDVRRFAEE 231
+ I D+ E A+E++ ++L+ P + N LL L LGR+ R+ +E
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDE 190
Query: 232 ML 233
ML
Sbjct: 191 ML 192
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
E++K + MK P++ F++ + IL+K + +++D M+G + + P+ YN
Sbjct: 166 ESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT-YGVSPDTCTYNV 224
Query: 107 VVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN- 165
++ C N+ VD FRFF +M D +TYN + + L + KV N + M K
Sbjct: 225 LIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKC 284
Query: 166 -EWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
P + T I E E A+ + + G+ P + N L+ GL +L
Sbjct: 285 EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDK 344
Query: 225 VRRFAEEM 232
++ E M
Sbjct: 345 MKDVLERM 352
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 103/249 (41%), Gaps = 2/249 (0%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G A + + EM+ + +P+ Y + + VDE +F R M+ NC
Sbjct: 195 KRGRTNMAKEVYDEMLGTYGVSPD-TCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDAD 253
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D L + L + M L PN++ Y ++ C +V+
Sbjct: 254 VVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVV 313
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN-EWQPTPLNCATAITMLL 182
++M G P+ +TYN + + L + K+ ++++ M + + P T I +
Sbjct: 314 LEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHC 373
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDV 242
A + A++++ + + I AS + L+ L G + +E+ + IL+
Sbjct: 374 CAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKF 433
Query: 243 TMQKLKKAF 251
+ L ++
Sbjct: 434 GSKPLAASY 442
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 14/245 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM--KGE 58
G+ K V E + F EM E F + + V+ Y T + L R +V A + M K E
Sbjct: 228 GFCKNSMVDEGFRFFREM-ESFNCDAD-VVTYNTLVDGLCRAGKVRIARNLVNGMGKKCE 285
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P + ++ + + + + + M G L PN+I YN +V LC + +D
Sbjct: 286 GLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRG--LKPNMITYNTLVKGLCEAHKLD 343
Query: 119 NVFRFFDQMVFHGAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ ++M G F PD+ T+N I + E F M K + +T
Sbjct: 344 KMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTL 403
Query: 178 ITMLLDADEPEFAIEIWNYILENGIL-------PLEASANVLLVGLRNLGRLSDVRRFAE 230
I L + + A ++++ + E IL PL AS N + L G+ R
Sbjct: 404 IRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIR 463
Query: 231 EMLNR 235
+++ R
Sbjct: 464 QLMKR 468
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 13/212 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + V EA EM R P +++ Y T + L ++D+ L MK +
Sbjct: 300 GYCMKQEVEEALVVLEEMTSR-GLKP-NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGG 357
Query: 61 FPTLKF-FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
F F F+ + + + +++++ M F + + Y+ ++ LC D D
Sbjct: 358 FSPDTFTFNTIIHLHCCAGNLDEALKVFESMKK--FRIPADSASYSTLIRSLCQKGDYDM 415
Query: 120 VFRFFDQMVFH-------GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPL 172
+ FD++ G+ P + +YN IFE L ++ K + E +++K Q P
Sbjct: 416 AEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQ 474
Query: 173 NCATAITMLLDADEPEFAIEIWNYILENGILP 204
+ T I E E+ ++L LP
Sbjct: 475 SYTTVIMGHCKEGAYESGYELLMWMLRRDFLP 506
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 15 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
F EM R ++ V Y + L + ++DEA F M+ E C P F +N ++ L
Sbjct: 1278 FEEM--RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL 1335
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFDQMVFHGAF 133
K ++L+ M + +P+++ YN ++ L + + V +F++M G
Sbjct: 1336 GKAGRLDDAMKLFQEMETL--RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 1393
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
P S TY+++ + K ++ + EM + + P P + I L A + A E+
Sbjct: 1394 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 1453
Query: 194 WNYILENGILPLEASANVLLVGLRNL---GRLSDVRRFAEEM 232
+ + EN +SA V V +++L GRL D +EM
Sbjct: 1454 FQELKENC---GSSSARVYAVMIKHLGKAGRLDDAINMFDEM 1492
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 7/269 (2%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIR----GKQVDEALKFLRVMKGENCFPT 63
VVE +M++ NP V+ T L ++R K V +A+ +K C P
Sbjct: 1125 VVEQYGEMWKMIQEMVRNPICVVT-PTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPI 1183
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +++ + +L+ QL++ M G + P+ + Y+A++ C D+ +
Sbjct: 1184 AQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG-HCFPDTVTYSALISAFCKLGRRDSAIQL 1242
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
++M G P + Y M+ K H + F EM +P I L
Sbjct: 1243 LNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 1302
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
A + A + + G P N ++ L GRL D + +EM R + VT
Sbjct: 1303 AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVT 1362
Query: 244 MQKLKKAFYNESRSMRDRFDSLERRWKTS 272
+ KA + ES+S S R K S
Sbjct: 1363 YNTIIKALF-ESKSRASEVPSWFERMKES 1390
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM + P+ V AY + L R +DEAL +R M+ C P
Sbjct: 1478 KAGRLDDAINMFDEM-NKLGCAPD-VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 1535
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ L+ L K +++ M + P+++ YN V+G L + + +
Sbjct: 1536 INSYNIILNGLAKTGGPHRAMEMLSNMKQS--TVRPDVVSYNTVLGALSHAGMFEEASKL 1593
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIK 148
+M G D +TY+ I E + K
Sbjct: 1594 MKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENC-FPTLKFFSNALDILVKLNDSTHTVQLWDI 89
AY + + L + K+ D A + + +K ENC + + ++ + L K + ++D
Sbjct: 1433 AYCSLIDALGKAKRYDLACELFQELK-ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 1491
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M +G P++ YNA++ L +D +M HG PD +YN+I L K
Sbjct: 1492 MNKLG--CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 1549
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDA 184
H M ++ +P ++ T + L A
Sbjct: 1550 GGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 1584
Score = 38.1 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 86/223 (38%), Gaps = 15/223 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK-QVDEALKFLRVMKGENCFP 62
K G + +A K F EM E P V+ Y T + L K + E + MK P
Sbjct: 1337 KAGRLDDAMKLFQEM-ETLRCIPS-VVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ +S +D K N + L + M GF P Y +++ L D
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCP--AAYCSLIDALGKAKRYDLACE 1452
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP-----TPLNCATA 177
F ++ + + Y ++ + L K ++ + N F EM K P L A
Sbjct: 1453 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 1512
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
T +LD A+ + E+G +P S N++L GL G
Sbjct: 1513 RTGMLDE-----ALSTMRRMQEHGCIPDINSYNIILNGLAKTG 1550
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 10/224 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + EA F +M ER + P +V Y + + L + K++D ALK L M +C
Sbjct: 680 GFCKVGKLDEAQMVFTKMSER-GYGP-NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G + PN++ Y A++ VD
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH--PNVVTYTAMIDGFGKAGKVDKC 795
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G P+ +TY ++ + + EM + W P +
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYW-PKHM---AGYRK 851
Query: 181 LLDADEPEFAIEIW--NYILENGILPLEASANVLLVGLRNLGRL 222
+++ EF I + + I EN +P+ + +L+ GRL
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A K F EMV + +V+ Y + ++ +++ A + +M E C P
Sbjct: 527 KVGLLQQARKWFDEMVR--DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVG--------IGFNLM------PNLIMYNAVVG 109
+ ++ +D K Q++ M G + F + PN+ Y A+V
Sbjct: 585 VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVD 644
Query: 110 LLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
LC + V D M G P+ + Y+ + + K K+ E + F +M + + P
Sbjct: 645 GLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGP 704
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
++ I L + A+++ + +LEN P ++ GL +G+ + R
Sbjct: 705 NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLM 764
Query: 230 EEM 232
M
Sbjct: 765 SMM 767
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF +P+ Y+ V+GLLCN + VDN F F++M + PD TY ++ + K
Sbjct: 471 MMSKGF--IPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + +F EM+++ P + I L A + A E++ +L G +P +
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 210 NVLLVGLRNLGRL 222
L+ G G++
Sbjct: 589 TALIDGHCKSGQI 601
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y L +R +Q+ + L +M E C+P+ + F++ + + D ++ +L
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV------FRFFDQMVFHGAFPDSLTYNM 141
M G P ++YN ++G +C N + ++ + + +M+ + + +
Sbjct: 393 KKMGDCG--CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ CL K + + EM+ + P + I +L +A + + A ++ + N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
++P + +L+ +G L R++ +EM+ VT L A Y ++R M
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA-YLKARKM 566
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 97/227 (42%), Gaps = 9/227 (3%)
Query: 18 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 77
++E+ E+ + V+ Y + L +EA+ FL M+ +C P + + L ++
Sbjct: 289 LIEKEEFKLDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347
Query: 78 NDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSL 137
++ +M+ G P+ ++N+++ C + D ++ +M G P +
Sbjct: 348 RQLGRCKRILSMMITEG--CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV 405
Query: 138 TYNMIFECLIKNKKVHEV------ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAI 191
YN++ + N+K+ + E + EM+ +N + L A + E A
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465
Query: 192 EIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
I ++ G +P ++ + ++ L N ++ + EEM + ++
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIR----GKQVDEALKFLRVMKGENCFPTLKF 66
A K +GEM++ HV+ + + L R + ++A +R M + P
Sbjct: 429 AEKAYGEMLD------AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+S + +L + + L++ M +++P++ Y ++ C + ++FD+
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKS--NHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV G P+ +TY + +K +K+ F M+ P + I + +
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600
Query: 187 PEFAIEIWNYILENGILP 204
E A +I+ + N +P
Sbjct: 601 IEKACQIYARMRGNADIP 618
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 93/248 (37%), Gaps = 20/248 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K + AN+ F M+ E +V+ Y + + Q+++A + M+G
Sbjct: 559 AYLKARKMSSANELFEMMLS--EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616
Query: 61 FPTLKFF----------------SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
P + + +D L K + L D+M G PN I+Y
Sbjct: 617 IPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE--PNHIVY 674
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
+A++ C +D F +M G P+ TY+ + + L K+K++ M++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
N P + I L + + A + + + E G P + ++ G G++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794
Query: 225 VRRFAEEM 232
+M
Sbjct: 795 CLELMRQM 802
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ EG++ +A + + +M++ E VL Y + + V EA + + M
Sbjct: 518 GFCNEGSIGDAKRVYDQMIK--EGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGY 575
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FPT F+ + ++L + MVG G +P++ Y+ +V LCN D
Sbjct: 576 FPTAPTFNALISAFCGQGKVGSALKLMEDMVGRG--CLPDMGSYSPMVDALCNKGDFQKA 633
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKN 165
R F QMV PD T+N + CL + E +N FH +++
Sbjct: 634 VRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQD 678
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST--HTVQ 85
+ Y + + L + Q +EAL+FL M E FP + +L IL N+ + +
Sbjct: 475 RISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFP--RAVDRSLRILGFCNEGSIGDAKR 530
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
++D M+ G +P++++Y ++ C + +V F ++MV HG FP + T+N +
Sbjct: 531 VYDQMIKEGG--VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISA 588
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
KV +M+ P + + + L + + + A+ ++ ++E ILP
Sbjct: 589 FCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPD 648
Query: 206 EASANVLLVGL 216
++ N +L+ L
Sbjct: 649 YSTWNSMLLCL 659
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 10/241 (4%)
Query: 1 GWEKEGNVVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE- 58
G+ G + A F +M + WN + Y+T + L G ++++ K L +M+
Sbjct: 413 GYCDSGMLDSAIDLFNDMKTDGINWN---FMTYDTLIRGLCSGGRMEDGFKILELMEESR 469
Query: 59 -NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ +++ + L K N ++ M L P + + + CN +
Sbjct: 470 GGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME----KLFPRAVDRSLRILGFCNEGSI 525
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+ R +DQM+ G P L Y + ++ V E +EM+ + + PT
Sbjct: 526 GDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNAL 585
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
I+ + A+++ ++ G LP S + ++ L N G R +M+ + I
Sbjct: 586 ISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 645
Query: 238 L 238
L
Sbjct: 646 L 646
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 34/235 (14%)
Query: 33 ETFLITLIRG----KQVDEALKFLRVMK--GENCFPTLKFFSNALDILVKLNDSTHTVQL 86
E+ +T++RG + V + +K L ++ GEN P+LK F++ LD+LVK +
Sbjct: 163 ESIFVTIVRGLGRARMVRQMIKVLDLITKFGEN--PSLKIFNSILDVLVKED-------- 212
Query: 87 WDIMVGIGFNLMPNLIMYNAVVG----------LLCNNNDVDNVFRFFDQMVFHGAFPDS 136
+ + +M N V G LC N + + F+ M G P++
Sbjct: 213 ----IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNT 268
Query: 137 LTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNY 196
+ YN + L KN KV + +EM+ +P+ + I+ + A+ +
Sbjct: 269 VIYNTMIHALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEK 324
Query: 197 ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
G +P +A ++ L GR+++ E + + ++ V L K F
Sbjct: 325 SFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGF 379
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K V +ANK F M+ E + +V+ Y + + Q+D+A + M+G+
Sbjct: 532 AYLKARKVFDANKLFEMML--LEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGD-- 587
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
S+ +D+ KL+D+ PN+I Y A+V LC N V+
Sbjct: 588 -----IESSDIDMYFKLDDNDCET--------------PNIITYGALVDGLCKANRVEEA 628
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
D M +G P+ + Y+ + + K K+ + F +M + + P ++ I
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
L + +++ + +LEN P ++ GL +G+ + R +M
Sbjct: 689 LFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 8/230 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y L + Q+ + L +M E C+P + F++ + K D ++ +L+
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN------VFRFFDQMVFHGAFPDSLTYNM 141
M+ G P ++YN +G +C+N ++ + + +M+ G + + +
Sbjct: 366 KKMIKCG--CQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSN 423
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
CL K + EM+ + P + I L DA + E A ++ + +NG
Sbjct: 424 FARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNG 483
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
I+P + +L+ G + R + +EML VT L A+
Sbjct: 484 IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAY 533
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G + A + F +M ER + P ++ Y + + +L + K++D LK L M +C
Sbjct: 653 GFCKTGKLENAQEVFVKMSER-GYCP-NLYTYSSLINSLFKEKRLDLVLKVLSKMLENSC 710
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D L K+ + +L M +G PN+I Y A++ ++
Sbjct: 711 TPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG--CYPNVITYTAMIDGFGKIGKIEQC 768
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ M G P+ +TY ++ + E EM + W P + ++
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYW-PRHI---SSYRK 824
Query: 181 LLDADEPEF--AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+++ EF +I + + + EN +P+E+ +L+ GRL EE+
Sbjct: 825 IIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI 878
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF +P+ Y+ V+G LC+ + V+ F F++M +G P TY ++ + K
Sbjct: 444 MMSKGF--VPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + N+F EM+++ P + + I L A + A +++ +L G P +
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561
Query: 210 NVLLVGLRNLGRLSDVRRFAEEM 232
L+ G G++ + M
Sbjct: 562 TALIDGHCKAGQIDKACQIYARM 584
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/175 (17%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS-------------NALDIL 74
+++ Y + L + +V+EA + L M C P + NA ++
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667
Query: 75 VKLNDSTHTVQLW---------------DIMVGIGFNLM-----PNLIMYNAVVGLLCNN 114
VK+++ + L+ D+++ + ++ PN+++Y ++ LC
Sbjct: 668 VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKV 727
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ +R +M G +P+ +TY + + K K+ + + +M P
Sbjct: 728 GKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAP 782
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 94/242 (38%), Gaps = 18/242 (7%)
Query: 31 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM 90
Y + L +V++A MK P++ ++ +D K +D M
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE------ 144
+ N PN++ Y +++ V + + F+ M+ G+ P+ +TY + +
Sbjct: 515 --LRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAG 572
Query: 145 -----CLIKNKKVHEVE----NFFHEMIKNEWQ-PTPLNCATAITMLLDADEPEFAIEIW 194
C I + ++E + + ++ N+ + P + + L A+ E A E+
Sbjct: 573 QIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELL 632
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+ + NG P + + L+ G G+L + + +M R T L + + E
Sbjct: 633 DTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKE 692
Query: 255 SR 256
R
Sbjct: 693 KR 694
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 86/220 (39%), Gaps = 11/220 (5%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
F +L + + +AL L + E P F++ + L + + + + D M I
Sbjct: 245 CFAYSLCKAGRCGDALSLL---EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
+ +PN++ Y ++ + R M+ G +P+ +N + K++
Sbjct: 302 --SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYS 359
Query: 154 EVENFFHEMIKNEWQPTPL------NCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
F +MIK QP L + L +D E A + ++ +L+ G++ +
Sbjct: 360 YAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKV 419
Query: 208 SANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+ + L G+ EM+++ + D T K+
Sbjct: 420 NVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKV 459
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 2/160 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
F L + D+A + + M + P +S + L + L++ M G
Sbjct: 424 FARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNG 483
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
++P++ Y ++ C + +FD+M+ P+ +TY + +K +KV +
Sbjct: 484 --IVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFD 541
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
F M+ +P + I A + + A +I+
Sbjct: 542 ANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 37/270 (13%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP--------------------TLKFF 67
+V Y + L + +VD A K L M + C P F
Sbjct: 103 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL 162
Query: 68 SNALDILVKLNDSTHTV----QLWDI------MVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ + + N H + ++W++ MV G L PN++ Y +V C ++
Sbjct: 163 AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRG--LQPNVVTYTTIVDAFCKAREL 220
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+MV G P+ LT+ + + ++ KVH+ + +H M+ W P+ ++
Sbjct: 221 RMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVL 280
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----L 233
I L + + A++ +N + N +LP + + L+ G N G L EM
Sbjct: 281 IRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 340
Query: 234 NRRILIYDVTMQKL-KKAFYNESRSMRDRF 262
+++Y + L KK ++++ S+ D+
Sbjct: 341 KPNVVVYTNMIDVLCKKMMFDQAESLIDKM 370
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 106/323 (32%), Gaps = 72/323 (22%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLI----RGKQVDEALKFLRVMKGE 58
+ G + A G E V E L+ I R D ALK
Sbjct: 3 QPSGGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDL 62
Query: 59 NCF-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
C P ++ +++ LD L++ N V ++D M G + PN+ YN ++ LC N+ V
Sbjct: 63 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD--PNVYTYNLLIRALCQNDRV 120
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF------------------ 159
D + D+M G PD +++ I + K +V E F
Sbjct: 121 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALC 180
Query: 160 ------------HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI-------------- 193
+EM++ QP + T + A E A I
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240
Query: 194 ---------------------WNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
W+++++ G P S NVL+ GL +G L F M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
Query: 233 LNRRILIYDVTMQKLKKAFYNES 255
+L T L F N
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAG 323
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 6/220 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + +D A+ MK C P + ++N +D+L K L D M
Sbjct: 312 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM- 370
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ N PN + +N ++G LC+ V F M +G P+ TYN + L +
Sbjct: 371 -LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ EM+ N ++ + + T I L + A+ + ++ GI P + N
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 489
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
++ G++S +M R ++ Y + + +L
Sbjct: 490 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 35/251 (13%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EMV+R P +V+ Y T + + +++ A L M C P + F+ + +
Sbjct: 194 EMVQR-GLQP-NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFE 251
Query: 77 LNDSTHTVQLWDIMVGIG---------------------------FN------LMPNLIM 103
+ +W MV G FN L+PN
Sbjct: 252 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 311
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+ +V N D+D +++M G P+ + Y + + L K + E+ +M+
Sbjct: 312 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 371
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ P + T I L D A+ +++ + NG P + + N LL GL G
Sbjct: 372 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431
Query: 224 DVRRFAEEMLN 234
D EMLN
Sbjct: 432 DAFAMVIEMLN 442
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 3/204 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + + T + L +V AL M+ C P + ++ L L + +
Sbjct: 376 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 435
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ GF L +L+ YN V+ LC + +M+ G PD+ T+N I
Sbjct: 436 MVIEMLNNGFEL--SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K KV +M + I+ L + + A+ +L GI P
Sbjct: 494 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 553
Query: 206 EASANVLLVGL-RNLGRLSDVRRF 228
EA+ NVL+ + N+G + + F
Sbjct: 554 EATWNVLVRAIFTNIGTIGPIHLF 577
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
NV +A +M+ER + P+ V+ Y + + R D A + L +M P
Sbjct: 442 NVHKAMGVLNKMLER-KVLPD-VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+++ +D L K L+D + +++PN++MY A++ C V+ ++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQK--DVIPNVVMYTALIDGYCKAGKVNEAHLMLEK 557
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
M+ P+SLT+N + L + K+ E +M+K + QPT I LL +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ A + +L +G P + + GRL D +M
Sbjct: 618 FDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKM 663
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 4/248 (1%)
Query: 20 ERFEWNPEHVLA-YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLN 78
E FE + ++ Y T L +L R VDE + M + P + ++ ++ K+
Sbjct: 173 ESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVG 232
Query: 79 DSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLT 138
+ Q ++V G + P+ Y +++ C D+D+ F+ F +M G + +
Sbjct: 233 NVEEANQYVSMIVEAGLD--PDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290
Query: 139 YNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYIL 198
Y + L +++ E + F +M ++ PT I L ++ A+ + +
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350
Query: 199 ENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSM 258
E GI P + VL+ L + +L R +ML + ++ +T L Y + +
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING-YCKRGMI 409
Query: 259 RDRFDSLE 266
D D +E
Sbjct: 410 EDALDVVE 417
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A + G+M+E+ +V+ Y + + +++AL + +M+ N P + ++
Sbjct: 376 KARELLGQMLEKGLM--PNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ K N L ++ ++P+++ YN+++ C + + D+ +R M
Sbjct: 434 LIKGYCKRNVHKAMGVLNKML---ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G PD TY + + L K+K+V E + F + + + P + I A +
Sbjct: 491 RGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNE 550
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
A + +L LP + N L+ GL G+L + E+M+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K V EA F + +E+ + P +V+ Y + + +V+EA L M +NC P
Sbjct: 509 KSKRVEEACDLF-DSLEQKDVIP-NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
F+ + L L + MV I +L P + ++ L + D D+ +R
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKI--DLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QM+ G PD+ TY + + ++ + E+ +M +N P ++ I D
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 184 ADEPEFAIEIWNYILENGILP 204
A + + + G P
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEP 705
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 126/326 (38%), Gaps = 75/326 (23%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + ++ A K F EM + + +AY + L +++DEA+ MK ++C
Sbjct: 262 GYCQRKDLDSAFKVFKEM--PLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDC 319
Query: 61 FPTLKFF-------------SNALDIL-------VKLNDSTHTV---------------Q 85
+PT++ + S AL+++ +K N T+TV +
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARE 379
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
L M+ G LMPN+I YNA++ C +++ + M P++ TYN + +
Sbjct: 380 LLGQMLEKG--LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437
Query: 146 LIKNKKVHEVENFFHEMIKNE-----------------------------------WQPT 170
K + VH+ ++M++ + P
Sbjct: 438 YCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 171 PLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAE 230
P + I L + E A ++++ + + ++P L+ G G++++ E
Sbjct: 497 PWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLE 556
Query: 231 EMLNRRILIYDVTMQKLKKAFYNESR 256
+ML++ L +T L + +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCTDGK 582
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 35/262 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GNV EAN+ +VE +P+ Y + ++ + K +D A K + M + C
Sbjct: 227 GYCKVGNVEEANQYVSMIVEA-GLDPD-FFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGC 284
Query: 61 -------------FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAV 107
+ A+D+ VK+ D + P + Y +
Sbjct: 285 RRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDD---------------DCYPTVRTYTVL 329
Query: 108 VGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEW 167
+ LC + +M G P+ TY ++ + L K+ + +M++
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Query: 168 QPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL--RNLGRLSDV 225
P + I E A+++ + + P + N L+ G RN+ + V
Sbjct: 390 MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGV 449
Query: 226 RRFAEEMLNRRILIYDVTMQKL 247
+ML R++L VT L
Sbjct: 450 ---LNKMLERKVLPDVVTYNSL 468
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + EA + F M+E ++P +V Y + + L + K++D ALK L M +C
Sbjct: 423 GCCKAGKLDEAQEVFTTMLE-CGYDP-NVYTYSSLIDRLFKDKRLDLALKVLSKMLENSC 480
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ +D L K+ + +L +M G N PN++ Y A++ + V+
Sbjct: 481 APNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCN--PNVVTYTAMIDGFGKSGRVEKC 538
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
QM G P+ +TY ++ + E EM + W P + A
Sbjct: 539 LELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYW---PRHVA-GYRK 594
Query: 181 LLDADEPEFAIEIWNY--ILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+++ EF ++ I EN +P+ VL+ GRL EE+
Sbjct: 595 VIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL 648
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 21/266 (7%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K G + +A F EM ER P +V+ Y + ++ ++V +A + +M + C P
Sbjct: 269 KAGFIEQARNWFDEM-ERDGCAP-NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIM---------VGIGFNLM------PNLIMYNAVV 108
+ ++ +D L K Q++ IM V + F ++ PN+ Y A+V
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386
Query: 109 GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQ 168
LC V M G P+ + Y+ + + K K+ E + F M++ +
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446
Query: 169 PTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRF 228
P ++ I L + A+++ + +LEN P ++ GL +G+ + +
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506
Query: 229 ----AEEMLNRRILIYDVTMQKLKKA 250
E+ N ++ Y + K+
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKS 532
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ GF +P+ Y+ V+G LCN + V+ F+ F +M +G PD Y + + K
Sbjct: 213 MMSKGF--IPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA 270
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ + N+F EM ++ P + I L + + A E++ +L G P +
Sbjct: 271 GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTY 330
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQ 245
L+ GL G++ + + M + I DV M
Sbjct: 331 TALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMH 366
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+VL Y L + +++ + L +M E C+P+ + F++ + + D + +L
Sbjct: 76 NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNND-----VDNVFRFFDQMVFHGAFPDSLTYNMI 142
MV G P ++YN ++G +C++ + +D + + +M+ G + + +
Sbjct: 136 KKMVQCG--CQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNF 193
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
CL K + N EM+ + P + I L +A + E A +++ + NGI
Sbjct: 194 SRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI 253
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
P L+ G + R + +EM
Sbjct: 254 APDVYVYTTLIDSFCKAGFIEQARNWFDEM 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 21/252 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
+ K V +AN+ + EM+ P +++ Y + L + ++++A + ++MK EN
Sbjct: 301 AYLKSRKVSKANEVY-EMMLSKGCTP-NIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Query: 61 F-----------------PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
P + + +D L K L M G PN ++
Sbjct: 359 EIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE--PNHVV 416
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+A++ C +D F M+ G P+ TY+ + + L K+K++ +M+
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML 476
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+N P + I L + + A ++ + E G P + ++ G GR+
Sbjct: 477 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVE 536
Query: 224 DVRRFAEEMLNR 235
++M ++
Sbjct: 537 KCLELLQQMSSK 548
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L+T RG +AL M+G+ C+ K + + V+ V+L+D M G G
Sbjct: 156 LLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
P+ +Y + LC D D + +M G P LTY+ + + L+K ++ E
Sbjct: 216 VK--PDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDE 273
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEFAIEIWNYILENGILPLEASAN 210
+M+ + + A TML+ E A+++++ ++ +G+ P +
Sbjct: 274 ALRLKDQMLLATGKKMDVVLA---TMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYG 330
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
VL+ G G + + +M+ + +L+
Sbjct: 331 VLIKGCDAEGMSDETYKLCRQMIEQGLLL 359
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 6/223 (2%)
Query: 17 EMVERF--EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
EM++RF E + Y + + ++ + A R M+ + P + +++ +D
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
+ N V+L + G + P++ YNA + C ++ F ++ G P
Sbjct: 581 CRTNCCDLAVKLLIYVRRDG--IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTP 638
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
D YN K + E F++ MIK T I FA+E++
Sbjct: 639 DVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELY 698
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
+ ++ N ++P + + L GL G + +R ++M RR+
Sbjct: 699 SEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM--RRL 739
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN+ A F ++ + P+ V Y +F+ K + EA KF M +
Sbjct: 617 KQGNMSRALH-FLVLLLKDGLTPD-VTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVAD 674
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ ++ +D K+ + ++L+ M + +++P+ + A+ LC + D+D R
Sbjct: 675 TEIYTTLIDGFSKVGNVAFALELYSEM--MANHVIPDDKTFTALTHGLCRSGDIDGAKRL 732
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
D M P+ +TYNM+ +++ K+ E EM+ + P
Sbjct: 733 LDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVP 778
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV----DEALKFLRVMK 56
G+ G V +A F E+V P +V T+ + LI+G DE K R M
Sbjct: 300 GYCLHGEVGKALDLFDEVVSD-GVTPTNV----TYGV-LIKGCDAEGMSDETYKLCRQMI 353
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ + F+ + L++ + L +++V G +P++ Y ++ LC +
Sbjct: 354 EQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG---VPDVFTYGCLIHWLCKHQK 410
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCAT 176
+ +D+M G P +TY+ + + ++ E + EM + P + T
Sbjct: 411 LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTT 470
Query: 177 AITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ + + A + N + +NG+ + + N+L+ GL + R+ +V +EML R
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEV----DEMLKR 525
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRG----KQVDEALKFLRVMK 56
G++ + EA+K + M++ + V+A TLI G V AL+ M
Sbjct: 649 GYKNLKMMAEASKFYYSMIK------QRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM 702
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ P K F+ L + D +L D M + ++ PN++ YN ++ +
Sbjct: 703 ANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRL--DVSPNIVTYNMLINACVRDGK 760
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMI 142
+ F+ D+M+ G PD TY+++
Sbjct: 761 LQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ FD+M G + D+ Y+++ ++ + F EM +P A I
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITI 227
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML---NR 235
+ L + + A+++ + E G P E + + ++ L +GR+ + R ++ML +
Sbjct: 228 SGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK 287
Query: 236 RILIYDVTMQKLKKAFYNESRSMRDRFD 263
++ + TM + E D FD
Sbjct: 288 KMDVVLATMLMHGYCLHGEVGKALDLFD 315
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 2/176 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + L + +++ EA+ MK P++ + + L + ++L+
Sbjct: 395 VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYS 454
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M GF PN + Y ++ DN + ++M +G TYN++ L
Sbjct: 455 EMPDKGFP--PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
+V EV+ + + PT + + I + A A ++ + + GI P
Sbjct: 513 VNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITP 568
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
GW + + A + + EM + E V+ Y T + R ++V++AL+ + M E
Sbjct: 263 GWFRARKLKHAERLWEEM--KNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGI 320
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDI--MVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P ++ +D L + + + + ++ IG P L YN++V C D++
Sbjct: 321 KPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIG----PTLSTYNSLVKGFCKAGDIE 376
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ +M+ G P TYN F + KV E N + +MI++ P L +
Sbjct: 377 GASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVL 436
Query: 179 TMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL 238
ML + ++ E A+++ + G A++ +L L + +L + E+M+ R I+
Sbjct: 437 KMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGII 496
Query: 239 IYDVTMQK----LKKAFYNE 254
+T QK LKK NE
Sbjct: 497 PQYLTFQKLNVELKKQGMNE 516
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 15/267 (5%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V E FG M+ R + P + + + L ++ EA++ ++M +C P+
Sbjct: 158 VFEGFVVFG-MILRKGYRP-NTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITC 215
Query: 68 SNALDILVKLNDSTHTVQLWDIMVG----IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ L + ++ + ++L + M+ G N P ++ Y+ ++ LC + V+ F
Sbjct: 216 GVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEF 275
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F +M G FP+ +TY + L + E + F EM+ + P + + I L
Sbjct: 276 FVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCK 335
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVT 243
+ + A +++ +++ + P + N+L+ G G + + ++ M+N+R +
Sbjct: 336 VGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGS 395
Query: 244 MQKLKKAFYNES---------RSMRDR 261
L KA+ +S R M DR
Sbjct: 396 YSILMKAYCKDSEVHGAMILYREMMDR 422
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 1 GWEKEGNVVEANKTFGEMV---ERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMK 56
G + GN A K M+ F N + V++Y + +L + V+ A +F MK
Sbjct: 221 GLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMK 280
Query: 57 GENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNND 116
+ FP + +++ L L ++ +L+ MV G L+P+++ ++ ++G LC
Sbjct: 281 EKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHG--LLPDVVTFSVLIGALCKVGK 338
Query: 117 VDNVFRFFDQMVFHGAFPDSLTYNMIFE--CL---------------------------- 146
V FD MV P + TYN++ E CL
Sbjct: 339 VKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSI 398
Query: 147 -----IKNKKVHEVENFFHEMIKNEWQPT 170
K+ +VH + EM+ QPT
Sbjct: 399 LMKAYCKDSEVHGAMILYREMMDRGIQPT 427
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 8/217 (3%)
Query: 45 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMY 104
+ EAL F M P L F+N L K H + + M IG L+ N I
Sbjct: 88 LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIG--LLKNFISL 145
Query: 105 NAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
N ++ LC+ V F F ++ G P++ T+ + + L K+ E F M
Sbjct: 146 NILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGV 205
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILEN----GI--LPLEASANVLLVGLRN 218
+ +P+ + C I+ L A+++ ++ GI P S + ++ L
Sbjct: 206 FDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCK 265
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
G + + F EM + I VT L + S
Sbjct: 266 DGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSAS 302
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 8 VVEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
V +A K FGE+ + + Y +L L + V EAL + ENC KF
Sbjct: 434 VGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGL--ENC----KF 487
Query: 67 FSNALDILVKLNDSTHTVQL---WDIMVGIGFN------LMPNLIMYNAVVGLLCNNNDV 117
SN +N + +L W++ FN L P+++ Y ++ LC
Sbjct: 488 ASNVAIFNSLINGMCRSEKLEIAWEL-----FNRLCNEALQPDVVTYTIMIYGLCKVGQP 542
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ F +M G P+ +T+N + L N + ++ H+M + P
Sbjct: 543 QKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSP 594
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 34 TFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGI 93
T L L R +++DEA L + F + + K ++ ++LWD M
Sbjct: 447 TMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506
Query: 94 GFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVH 153
++P++I YN+++ LC + D+++ G PD +TYN I + +V
Sbjct: 507 --EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVE 564
Query: 154 EVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLL 213
+ F ++M++ ++P + C T + L E A++++N + G S N ++
Sbjct: 565 KAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTII 624
Query: 214 VGLRNLGRLSDVRRFAEEMLNRRI 237
+ L R + EEM +++
Sbjct: 625 LSLCKEKRFGEAFDLLEEMEEKKL 648
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+G + EA + EM E + +P+ V+ Y T + +E K + M+G
Sbjct: 311 GFCKQGRIAEAMRLREEM-ENLKLSPD-VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + VK + M G +P+++ YN ++ C +D
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG--CLPDIVTYNTLISWHCKVGKMDEA 426
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FR D+M G D +T N + L + +K+ E + + + ++ T I
Sbjct: 427 FRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIG 486
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
++ A+ +W+ + E I+P + N ++ GL +G+ + +E+L ++
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD 546
Query: 241 DVTMQKLKKAFYNESR 256
++T + + E +
Sbjct: 547 EITYNTIIHGYCQEGQ 562
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 7/215 (3%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM----VGIGFNLMPNLI 102
+A + MK PTL + L+ LV+ S+H+++L + + IG + N
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRF-PSSHSIRLSKAVFTDFIKIGVKINTN-- 198
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ C N R +M +G PD++TYN I + L K +++E + +M
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
P + + A + + +N ++P + NV++ G GR+
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318
Query: 223 SDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRS 257
++ R EEM N ++ VT L + S
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS 353
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 91/231 (39%), Gaps = 41/231 (17%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T +I + ++ +AL+ MK + P++ +++ + L ++ + + D
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPD-------------- 135
++ G L+P+ I YN ++ C V+ F+F ++MV PD
Sbjct: 538 LLESG--LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKE 595
Query: 136 ---------------------SLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
+++YN I L K K+ E + EM + + P
Sbjct: 596 GMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTY 655
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDV 225
+ L DA + A E + I E G ++ L +G R R S++
Sbjct: 656 NAILGGLTDAGRMKDAEEFISKIAEKG----KSENQFLELGKRQDARTSEI 702
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 110/294 (37%), Gaps = 72/294 (24%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT------ 63
EA + G+M R P + Y T L L + +++EA L MK + FP
Sbjct: 215 EAIRVLGKM--RDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNI 272
Query: 64 -------LKFFSNALDILVKLNDSTHTVQLWDIMVGI-GF-------------------N 96
L + A +++ ++ ++ W V I GF
Sbjct: 273 LVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLK 332
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
L P+++ YN ++ + + F+ ++M G P+S+TYN++ + +K K+ EV+
Sbjct: 333 LSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVD 392
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+M E+G LP + N L+
Sbjct: 393 KTVRKM-----------------------------------EESGCLPDIVTYNTLISWH 417
Query: 217 RNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
+G++ + R +EM + + + DVT+ + +A E + D S RR
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
Length = 633
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Query: 41 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
R ++ D A + +R M P + +S + L + + D+M+ G PN
Sbjct: 230 RLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQ--PN 287
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
Y +V C + R + M+ G P + TYN++ E L K EV+
Sbjct: 288 AHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLE 347
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
E W P + ++ + L A + + + + +L NG+ P E + N+LL G+
Sbjct: 348 ESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGV 403
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G G V EA M+E H Y + G ++ EA + L M
Sbjct: 262 GLCSAGQVAEALGVLDLMLEEGCQPNAHT--YTPIVHAYCTGGRIHEAKRLLNTMIASGF 319
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P+ ++ ++ L K+ L + G+ P++I Y++ + LC +D
Sbjct: 320 APSTATYNVLVEALCKVGAFEEVDALLEESTAKGWT--PDVITYSSYMDGLCKAGRIDKS 377
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F D+M+ +G P +T N++ + + ++ + + W +N T +
Sbjct: 378 FALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRR 437
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
L D ++++ + + GI P + N+++ L LGRL
Sbjct: 438 LCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 479
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 8/215 (3%)
Query: 42 GKQVDEALKFLRVMKGE-NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
G D AL L M+ P F+ L + + + D M G + P+
Sbjct: 159 GAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVLDAMAADG--VAPD 216
Query: 101 LIMYNAVVGL-LCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
+VG+ C D + MV +G PD +TY+ + L +V E
Sbjct: 217 AAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVL 276
Query: 160 HEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNL 219
M++ QP + A + N ++ +G P A+ NVL+ L +
Sbjct: 277 DLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKV 336
Query: 220 GRLSDVRRFAEEMLNRR----ILIYDVTMQKLKKA 250
G +V EE + ++ Y M L KA
Sbjct: 337 GAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKA 371
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 24 WNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHT 83
W P+ V+ Y +++ L + ++D++ + M P+ + LD + + + +
Sbjct: 354 WTPD-VITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 412
Query: 84 VQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIF 143
+L + +G++ N++ YN V+ LC+ +V + F M G P+S T+N++
Sbjct: 413 KRLLECSAELGWDA--NVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVV 470
Query: 144 ECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGIL 203
L K ++H+ E+ T + T I L + E + ++E GI
Sbjct: 471 HSLCKLGRLHKALCLLRS---KEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIA 527
Query: 204 P 204
P
Sbjct: 528 P 528
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 37/270 (13%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP--------------------TLKFF 67
+V Y + L + +VD A K L M + C P F
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL 215
Query: 68 SNALDILVKLNDSTHTV----QLWDI------MVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
+ + + N H + ++W++ MV G L PN++ Y +V C ++
Sbjct: 216 AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRG--LQPNVVTYTTIVDAFCKAREL 273
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA 177
+MV G P+ LT+ + + ++ KVH+ + +H M+ W P+ ++
Sbjct: 274 RMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVL 333
Query: 178 ITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM----L 233
I L + + A++ +N + N +LP + + L+ G N G L EM
Sbjct: 334 IRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 393
Query: 234 NRRILIYDVTMQKL-KKAFYNESRSMRDRF 262
+++Y + L KK ++++ S+ D+
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKM 423
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 95/281 (33%), Gaps = 68/281 (24%)
Query: 41 RGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMP 99
R D ALK C P ++ +++ LD L++ N V ++D M G + P
Sbjct: 98 RAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD--P 155
Query: 100 NLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFF 159
N+ YN ++ LC N+ VD + D+M G PD +++ I + K +V E F
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL 215
Query: 160 ------------------------------HEMIKNEWQPTPLNCATAITMLLDADEPEF 189
+EM++ QP + T + A E
Sbjct: 216 AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRM 275
Query: 190 AIEI-----------------------------------WNYILENGILPLEASANVLLV 214
A I W+++++ G P S NVL+
Sbjct: 276 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIR 335
Query: 215 GLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
GL +G L F M +L T L F N
Sbjct: 336 GLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG 376
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 6/220 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y T + +D A+ MK C P + ++N +D+L K L D M
Sbjct: 365 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM- 423
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
+ N PN + +N ++G LC+ V F M +G P+ TYN + L +
Sbjct: 424 -LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
+ EM+ N ++ + + T I L + A+ + ++ GI P + N
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 542
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKL 247
++ G++S +M R ++ Y + + +L
Sbjct: 543 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 35/251 (13%)
Query: 17 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 76
EMV+R P +V+ Y T + + +++ A L M C P + F+ + +
Sbjct: 247 EMVQR-GLQP-NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFE 304
Query: 77 LNDSTHTVQLWDIMVGIG---------------------------FN------LMPNLIM 103
+ +W MV G FN L+PN
Sbjct: 305 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 364
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y+ +V N D+D +++M G P+ + Y + + L K + E+ +M+
Sbjct: 365 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 424
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ P + T I L D A+ +++ + NG P + + N LL GL G
Sbjct: 425 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484
Query: 224 DVRRFAEEMLN 234
D EMLN
Sbjct: 485 DAFAMVIEMLN 495
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 3/204 (1%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P + + + T + L +V AL M+ C P + ++ L L + +
Sbjct: 429 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 488
Query: 86 LWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFEC 145
+ M+ GF L +L+ YN V+ LC + +M+ G PD+ T+N I
Sbjct: 489 MVIEMLNNGFEL--SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546
Query: 146 LIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPL 205
K KV +M + I+ L + + A+ +L GI P
Sbjct: 547 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 606
Query: 206 EASANVLLVGL-RNLGRLSDVRRF 228
EA+ NVL+ + N+G + + F
Sbjct: 607 EATWNVLVRAIFTNIGTIGPIHLF 630
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG++ A + ++ P V+++ T + IR +DE + M P
Sbjct: 146 KEGDIRVAQLVL-NAITKWGLRPS-VVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPD 203
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G ++PN + + ++ C N VD
Sbjct: 204 VYTYSVLINGLCKESKMDDANELFDEMLDKG--MVPNGVTFTTLIDGHCKNGRVDLAMEI 261
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ QM+ PD +TYN + L K ++ + + EM +P + T I
Sbjct: 262 YKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCK 321
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E +++ I + L+ GL GR D + EML+
Sbjct: 322 EGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 372
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P++ F+ ++ ++L D +L M G + P++ Y+ ++ LC + +D+
Sbjct: 167 PSVVSFNTLINGYIRLGDLDEGFRLKSAMHASG--VQPDVYTYSVLINGLCKESKMDDAN 224
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
FD+M+ G P+ +T+ + + KN +V + +M+ P + T I L
Sbjct: 225 ELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 284
Query: 182 LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYD 241
E + A ++ + + G+ P + + L+ G G + + M+ I + D
Sbjct: 285 CKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDD 344
Query: 242 VTMQKLKKAFYNESRSM 258
V L E RS+
Sbjct: 345 VVYTALISGLCQEGRSV 361
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +AN+ F EM+++ P V + T + + +VD A++ + M ++
Sbjct: 213 GLCKESKMDDANELFDEMLDK-GMVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 270
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L ++ + L K + L D M G L P+ I Y ++ C D++
Sbjct: 271 SPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEG--LKPDKITYTTLIDGCCKEGDMETA 328
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F +M+ D + Y + L + + + E EM+ +P
Sbjct: 329 FEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKP 377
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
K+GN + A F EM E+ + +VL Y + + + +A + LR M + P
Sbjct: 22 KDGNHINAQNLFTEMHEKGIF--PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS ++ VK + +++ M + +++ P I YN+++ C + VD+ R
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEM--LRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
D M G PD +T++ + K K+V F EM + + T I
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ + A ++ N ++ G+ P + + +L GL
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
++ ++++ A+V LC + + N F +M G FP+ LTYN + + + + +
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ MI+ + P + + I + + A EI+ +L I P + N ++ G
Sbjct: 65 DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
R+ D +R + M ++ VT L + R
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KE V EA + + EM+ R+ P + Y + + + +VD+A + L M + C P
Sbjct: 92 KERKVSEAEEIYKEML-RWSIFPT-TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPD 149
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ FS ++ K + ++++ M G ++ N + Y ++ C D+D
Sbjct: 150 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRG--IVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNE 166
++M+ G PD +T++ + L K++ + ++ K+E
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNN---NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKV 152
+ PN++ YN ++ C++ +D D + R M+ PD +T++ + +K +KV
Sbjct: 40 GIFPNVLTYNCMIDSFCHSGRWSDADQLLR---HMIEKQINPDIVTFSALINAFVKERKV 96
Query: 153 HEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVL 212
E E + EM++ PT + + I D + A + + + G P + + L
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 213 LVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ G R+ + EM R I+ VT L F
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 85/217 (39%), Gaps = 3/217 (1%)
Query: 55 MKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNN 114
M + FP + ++ +D + QL M+ N P+++ ++A++
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN--PDIVTFSALINAFVKE 93
Query: 115 NDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNC 174
V + +M+ FP ++TYN + + K +V + + M P +
Sbjct: 94 RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 175 ATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+T I A + +EI+ + GI+ + L+ G +G L + EM++
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 235 RRILIYDVTMQKLKKAFYNESRSMRDRFDSLERRWKT 271
+ +T + ++ + +R F LE K+
Sbjct: 214 CGVAPDYITFHCMLAGLCSK-KELRKAFAILEDLQKS 249
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 7 NVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 66
N+ EA K +MVE+ +V Y T + R D + L M+ + P +
Sbjct: 442 NMEEAEKCIKKMVEKGVL--PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS 499
Query: 67 FSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQ 126
+ ++ L K + + MV G ++PN +YN ++ C + + FRFFD+
Sbjct: 500 YGCLINCLCKDANILEAEVILGDMVHRG--VVPNAQIYNMLIDGSCIAGKLKDAFRFFDE 557
Query: 127 MVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADE 186
MV P +TYN++ L K KV E EN E+ + + + I+ A
Sbjct: 558 MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGN 617
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ A+E++ + ++GI P + + L+ G G L V + +EML
Sbjct: 618 VQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQ 664
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 2/227 (0%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V + FL +L+ K+ ++ L+ + P + A+ VKL D ++L
Sbjct: 147 VASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMT 206
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + P + +YN V+G LC + + + FD+M+ P+ +TYN + + K
Sbjct: 207 CMKRGGVS--PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
++ E N M +PT + + + L A E A + + G +P +
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFT 324
Query: 209 ANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNES 255
L G G + +EE + + + I D T L A E
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEG 371
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 7/233 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G K+G V+EA E+ + ++ V+ Y + + V +AL+ MK
Sbjct: 576 GLCKKGKVMEAENLASEITRKGLSFD---VITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
PTL + + K +++ M + NL+P+ ++YNA++ + DV
Sbjct: 633 IKPTLNTYHRLIAGCGK-EGLVLVEKIYQEM--LQMNLVPDRVIYNALIHCYVEHGDVQK 689
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
M G PD +TYN + K ++H+V+N ++M P I
Sbjct: 690 ACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIV 749
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ + A + + ENG P + + L+ GLR GR D EM
Sbjct: 750 GHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 2/208 (0%)
Query: 25 NPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTV 84
P L + L K V E+ + +MK + P++ + L+ LV T+
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167
Query: 85 QLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
QL+ +V G L P+ MY + D+ M G P YN++
Sbjct: 168 QLFSEIVESG--LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIG 225
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L K K++ + E F EM+ P + T I + E A I + + P
Sbjct: 226 GLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEP 285
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEM 232
+ N LL GL + + +R EEM
Sbjct: 286 TIITFNSLLNGLCRAQMMEEAQRVLEEM 313
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 10/261 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLI--TLIRGKQVDEALKFLRVMKGE 58
G K GNV +A+ T E R +L Y ++ L + +++A + L+
Sbjct: 331 GHLKCGNV-DASITLSEEAVR---KGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN 386
Query: 59 NCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVD 118
P FF+ ++ ++ D + M +G L PN + YN++V C +++
Sbjct: 387 GLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG--LRPNHVTYNSLVKKFCEMKNME 444
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ +MV G P+ TYN + + ++ EM K +P ++ I
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504
Query: 179 TMLL-DADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
L DA+ E + I ++ G++P N+L+ G G+L D RF +EM+ R I
Sbjct: 505 NCLCKDANILEAEV-ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563
Query: 238 LIYDVTMQKLKKAFYNESRSM 258
+ VT L + + M
Sbjct: 564 VPTLVTYNILINGLCKKGKVM 584
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 93/251 (37%), Gaps = 39/251 (15%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KE + +A K F EM++R P + Y T + + Q++EA MK EN
Sbjct: 226 GLCKEKRMKDAEKLFDEMLDR-RVAPNRI-TYNTLIDGYCKVGQLEEAFNIRERMKVENV 283
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
PT+ I +N+++ LC ++
Sbjct: 284 EPTI-------------------------------------ITFNSLLNGLCRAQMMEEA 306
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
R ++M +G PD TY +F+ +K V E ++ Q C+ +
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L E A E+ LENG+ P+ N ++ G +G ++ E+M +
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426
Query: 241 DVTMQKLKKAF 251
VT L K F
Sbjct: 427 HVTYNSLVKKF 437
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 40/242 (16%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G++ +A T E +E P HV Y + + K ++EA K ++ M +
Sbjct: 401 GYCQVGDINKAYTTI-EKMEAVGLRPNHV-TYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ ++ +D + Q+ + M G L PN+I Y ++ LC + ++
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG--LKPNVISYGCLINCLCKDANILEA 516
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
MV G P++ YNM+ + K+ + FF EM+ E
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE-------------- 562
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
I+P + N+L+ GL G++ + A E + R+ L +
Sbjct: 563 ---------------------IVPTLVTYNILINGLCKKGKVMEAENLASE-ITRKGLSF 600
Query: 241 DV 242
DV
Sbjct: 601 DV 602
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G P + N+ E L+ K+ + F E++++ +P AI + + + A
Sbjct: 142 GVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRA 201
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKA 250
IE+ + G+ P NV++ GL R+ D + +EML+RR+ +T L
Sbjct: 202 IELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDG 261
Query: 251 FYNESRSMRDRFDSLER 267
Y + + + F+ ER
Sbjct: 262 -YCKVGQLEEAFNIRER 277
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F E + ++ P V+++ T + IR +DE + M P
Sbjct: 148 KEGEMRLAQSVFDE-ITKWGLRPS-VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+ M+G G L+PN + + ++ C +D
Sbjct: 206 VYTYSVLINGLCKESKMNDANELFGEMIGNG--LVPNGVTFTTLIDGHCKTGSIDLAMET 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ +M+ G PD +TYN + L K + + ++ EM +P + T I
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A+ +++ I + + L+ GL G+ D + EML+
Sbjct: 324 EGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLS 374
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 21/283 (7%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G EA + EM+ER + NP +V+ Y + ++ ++ EA + M
Sbjct: 293 GFCSSGRWSEAQRLLQEMLER-KINP-NVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ +D K N ++ +M G + P++ +N ++ C +D+
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS--PDVFTFNTLIDGYCGAKRIDDG 408
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFE--CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+M G D+ TYN + CL+ + ++ + +MI + P + C T +
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGD--LNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 179 TMLLDADEPEFAIEIWNYILE-----------NGILPLEASANVLLVGLRNLGRLSDVRR 227
L D + + A+E++ + + NG+ P + N+L+ GL N G+ +
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526
Query: 228 FAEEMLNRRILIYDVTMQKLKKAFYNESR--SMRDRFDSLERR 268
+EM +R I+ +T + +SR FDS+ +
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G E V EA F +M +V+ + T + L R +V EA+ L M +
Sbjct: 156 GLCVEDRVSEALDLFHQMCR------PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D + K+ D+ + L M + ++ PN+++Y+A++ L + +
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMS-HIKPNVVIYSAIIDGLWKDGRHSDA 268
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ +M G FPD TYN + + + + E + EM++ + P + + I
Sbjct: 269 HNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
+ + A E+++ +L GI+P + N ++ G RL
Sbjct: 329 YVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 15/262 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K+ + A F M + +P+ V + T + K++D+ + L M
Sbjct: 363 GFCKQNRLDAAEHMFYVMATK-GCSPD-VFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
++ + + D + L M+ G + P+++ N ++ LC+N + +
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG--VCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 121 FRFFDQM-----------VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
F M F+G PD TYN++ LI K E E + EM P
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538
Query: 170 TPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFA 229
+ ++ I L + A ++++ + P + N L+ G GR+ D
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598
Query: 230 EEMLNRRILIYDVTMQKLKKAF 251
EM R I+ +T L F
Sbjct: 599 CEMGRRGIVADAITYITLIHGF 620
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 96/247 (38%), Gaps = 44/247 (17%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A TFG+ + + + P+ V+ + T L L +V EAL M C P + F+
Sbjct: 131 ALSTFGK-ITKLGFQPD-VVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTL 184
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
++ L + V L D MV G L PN I Y +V +C D + +M
Sbjct: 185 MNGLCREGRVVEAVALLDRMVEDG--LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEM 242
Query: 131 GAF-PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ + Y+ I + L K+ + + N + EM
Sbjct: 243 SHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM--------------------------- 275
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
E GI P + N ++ G + GR S+ +R +EML R+I VT L
Sbjct: 276 --------QEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 250 AFYNESR 256
A+ E +
Sbjct: 328 AYVKERK 334
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 5/252 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG-EN 59
G +EG VVEA MVE P + Y T + + + AL LR M+ +
Sbjct: 187 GLCREGRVVEAVALLDRMVED-GLQPNQI-TYGTIVDGMCKIGDTVSALNLLRKMEEMSH 244
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
P + +S +D L K + L+ M G + P+L YN ++ C++
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG--IFPDLFTYNCMIDGFCSSGRWSE 302
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
R +M+ P+ +TY+ + +K +K E E + EM+ P + + I
Sbjct: 303 AQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID 362
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ + A ++ + G P + N L+ G R+ D EM ++
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422
Query: 240 YDVTMQKLKKAF 251
T L F
Sbjct: 423 DTTTYNTLIHGF 434
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 3/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G+ V A +M E P +V+ Y + L + + +A M+ +
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKP-NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI 280
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
FP L ++ +D + +L M+ N PN++ Y+A++
Sbjct: 281 FPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN--PNVVTYSALINAYVKERKFFEA 338
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+D+M+ G P+++TYN + + K ++ E+ F+ M P T I
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
A + E+ + + E G++ + N L+ G +G L+ +++M++ +
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458
Query: 241 DVTMQKL 247
VT L
Sbjct: 459 IVTCNTL 465
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y + LI + EA + + M P +S+ ++ L K + Q++D
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M F+ P+++ +N +V C VD+ F +M G D++TY + K
Sbjct: 565 SMGSKSFS--PDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEI 193
++ + F EMI + P + + +T+L +E + A+ +
Sbjct: 623 VGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAM 667
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/149 (18%), Positives = 64/149 (42%)
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
P++ YN ++ L N + +M G P+++TY+ + L K ++ E
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F M + P + T ++ A + +E++ + GI+ + L+ G R
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622
Query: 219 LGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
+G ++ +EM++ + +T++ +
Sbjct: 623 VGNINGALDIFQEMISSGVYPDTITIRSM 651
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/178 (16%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 43 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLI 102
K +++A+ M P++ F+ + ++V++ + L+ M + ++
Sbjct: 56 KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK--QIPCDVY 113
Query: 103 MYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEM 162
+N ++ C+ + + F ++ G PD +T++ + L +V E + FH+M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173
Query: 163 IKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
+ P + T + L A+ + + ++E+G+ P + + ++ G+ +G
Sbjct: 174 CR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 11/209 (5%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G + EA F EMV + P V+ Y T + L R D+ALK M
Sbjct: 206 GLCRRGRLAEALDMFSEMVGKC-IAPT-VVTYTTVIHWLAREGCFDDALKIFHEMGRRGV 263
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S+ +D L K +T ++L D MV +PN I Y++V+ LC + +
Sbjct: 264 SPNLVTYSSLIDGLCKGGRATSALELLDRMV--KEKKLPNTITYSSVIDGLCKEHMLSEA 321
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA----- 175
D+M G PD+ + + L + E N+ EM+ +P + +
Sbjct: 322 MEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARI 381
Query: 176 --TAITMLLDADEPEFAIEIWNYILENGI 202
T +T L D E A +++ I
Sbjct: 382 NNTVLTALCDKGELGRAFQVYQSTRTRSI 410
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 17/252 (6%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V +Y T + L R ++ EAL M G+ PT+ ++ + L + ++++
Sbjct: 197 VCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFH 256
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
M G + PNL+ Y++++ LC + D+MV P+++TY+ + + L K
Sbjct: 257 EMGRRGVS--PNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCK 314
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE---NGILP- 204
+ E M +P I L DA A+E NY+ E GI P
Sbjct: 315 EHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGR---AVEAANYLDEMVLAGIEPN 371
Query: 205 -----LEASA-NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFY--NESR 256
L A N +L L + G L + + R I T L ++F N +
Sbjct: 372 RVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNNIEK 431
Query: 257 SMRDRFDSLERR 268
+ R D L R
Sbjct: 432 AARVVLDMLSER 443
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Query: 42 GKQVDEALKFLR-VMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPN 100
+++AL+ R + K + C ++ +D L + + ++ MVG + P
Sbjct: 179 AAHIEDALRLFRNIPKPDVCS-----YNTIIDGLCRRGRLAEALDMFSEMVG--KCIAPT 231
Query: 101 LIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFH 160
++ Y V+ L D+ + F +M G P+ +TY+ + + L K +
Sbjct: 232 VVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLD 291
Query: 161 EMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLG 220
M+K + P + ++ I L A+E+ + + G P L+VGL + G
Sbjct: 292 RMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAG 351
Query: 221 RLSDVRRFAEEML 233
R + + +EM+
Sbjct: 352 RAVEAANYLDEMV 364
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 9/210 (4%)
Query: 48 ALKFLRVMKGENCFP-TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
AL R + P + + ++ L LV + L M GF P YN
Sbjct: 112 ALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGF--APTAATYNV 169
Query: 107 VVGLLCNNN--DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIK 164
++ C++ +++ R F + PD +YN I + L + ++ E + F EM+
Sbjct: 170 LLKAHCSDAAAHIEDALRLFRNI----PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVG 225
Query: 165 NEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSD 224
PT + T I L + A++I++ + G+ P + + L+ GL GR +
Sbjct: 226 KCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATS 285
Query: 225 VRRFAEEMLNRRILIYDVTMQKLKKAFYNE 254
+ M+ + L +T + E
Sbjct: 286 ALELLDRMVKEKKLPNTITYSSVIDGLCKE 315
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 2 WEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 61
+ K+ V+EA + MV++ Y + L + +VD+A + R M+G+
Sbjct: 567 YCKKEKVIEACSAYRSMVDQGILGDAKT--YTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 62 PTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVF 121
P + + ++ KL + ++D MV G L PN+I+YN ++G C + +++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 122 RFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITML 181
D+M G P+++TY I + K+ + E F EM P T +
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 182 LDADEPEFAIEIWN 195
++ E AI I+
Sbjct: 743 CRLNDVERAITIFG 756
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 8/216 (3%)
Query: 3 EKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 62
KEG + +A F M+ P+ AY + + R K V + + L MK N
Sbjct: 358 SKEGVMEKAKALFDGMIAS-GLIPQ-AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
+ + + + D + M+ G PN+++Y ++ N+ + R
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR--PNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
+M G PD YN + L K K++ E +F EM++N +P I+ +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
+A E A + + E G+LP VL GL N
Sbjct: 534 EASEFASADKYVKEMRECGVLP----NKVLCTGLIN 565
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 42/208 (20%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K GN+ +A+ F EMVE E +V+ Y L R ++++A + L M +
Sbjct: 636 GFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +D K D +L+D M G L+P+ +Y +V C NDV+
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG--LVPDSFVYTTLVDGCCRLNDVERA 751
Query: 121 FRFFDQ---------------------------------MVFHGAF-----PDSLTYNMI 142
F + G+F P+ +TYN++
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPT 170
+ L K + + FH+M PT
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPT 839
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 6/238 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVER-FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 59
G+ +E NV + + EM +R +P Y T + + +D A ++ M
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDN 119
C P + ++ + ++ + +++ M G + P++ YN+++ L +D
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--IAPDIFCYNSLIIGLSKAKRMDE 505
Query: 120 VFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAIT 179
F +MV +G P++ TY I+ + + + EM + P + C I
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 180 MLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRI 237
++ A + +++ GIL + VL+ GL ++ D EM + I
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 6/204 (2%)
Query: 32 YETFLITLIRGKQVDEALKFLR--VMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
Y + L++G+ D A + V G N P + + + ++ K L+D
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDG 372
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
M+ G L+P Y +++ C +V + +M TY + + + +
Sbjct: 373 MIASG--LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+ N EMI + +P + T I L A+ + + E GI P
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 210 NVLLVGLRNLGRLSDVRRFAEEML 233
N L++GL R+ + R F EM+
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMV 514
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 7/231 (3%)
Query: 32 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMV 91
Y+ + L + K++++A L M +S +D L+K ++ L MV
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 92 GIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKK 151
G N+ P MY+ + ++ ++ FD M+ G P + Y + E + K
Sbjct: 340 SHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 152 VHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANV 211
V + EM K +P T + + + + + A I ++ +G P
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 212 LLVGLRNLGRLSDVRRFAEEM----LNRRILIYDVTMQKLKKA-FYNESRS 257
L+ R D R +EM + I Y+ + L KA +E+RS
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 94/240 (39%), Gaps = 10/240 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G++ EA + F EM + + Y T + R V+ A+ K + C
Sbjct: 706 GYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGC 762
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM--PNLIMYNAVVGLLCNNNDVD 118
+ F+ ++ + K + ++ + ++ F+ PN + YN ++ LC +++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
F QM P +TY + K + E+ F E I +P + + I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 179 TMLLDADEPEFAIEIWNYI-----LENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L A+ + + + +++G ++ LL G +G + + E M+
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
L+P Y+ ++ LC +++ +M G D+ TY+++ + L+K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
+ HEM+ + P I ++ E A +++ ++ +G++P +A A L+
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP-QAQAYASLI- 389
Query: 216 LRNLGRLSDVRRFAE---EMLNRRILIYDVTMQKLKKA 250
R +VR+ E EM R I+I T + K
Sbjct: 390 -EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG+ +A T+ EM++R +P+ V+ Y + + L +G+ +D+A++ L M
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDR-RISPD-VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ L + M G P+++ YN+++ LC N
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVE--PDVVTYNSLMDYLCKNGRSTEA 320
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ FD M G PD TY + + + E+ M++N P I
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
++ + A+ +++ + ++G+ P + ++ L G + D + E+M++
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440
Query: 237 ILIYDVTMQKL 247
I++Y + L
Sbjct: 441 IIVYTSLIHSL 451
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ +G +VE + MV R +P+H + + + + ++VDEA+ M+
Sbjct: 345 GYATKGALVEMHALLDLMV-RNGIHPDHHV-FNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + + + IL K + ++ M+ G L PN+I+Y +++ LC + D
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG--LTPNIIVYTSLIHSLCIFDKWDKA 460
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+M+ G +++ +N I K +V E E F M++ +P + +T I
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDG 520
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR----R 236
A + + A ++ + + G+ P + N L+ G + R+ D +EM++
Sbjct: 521 YCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPN 580
Query: 237 ILIYDVTMQKL 247
I+ Y++ +Q L
Sbjct: 581 IITYNIILQGL 591
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 20/240 (8%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGEN 59
G+ GNVV+ G VE + P L L K+ +A+ LR M +
Sbjct: 106 GFAALGNVVKK----GFRVEAITFTP--------LLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 60 CFPTLKFFSNALDILVKLNDSTHTVQLWDIMVG-IGFNLMPNLIMYNAVVGLLCNNNDVD 118
C P + + L L N S ++L +M G P+++ Y V+ D D
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 119 NVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAI 178
+ + +M+ PD +TY+ I L K + + + M+KN P NC T
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP---NCMTYN 270
Query: 179 TML---LDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
++L +++P+ AI + +G+ P + N L+ L GR ++ R+ + M R
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 5/194 (2%)
Query: 47 EALKFLRVM---KGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIM 103
EAL+ L +M +G P + ++ ++ K DS + M + + P+++
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRRISPDVVT 233
Query: 104 YNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
Y++++ LC +D MV +G P+ +TYN I +++ E F +M
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
+ +P + + + L A +I++ + + G+ P A+ LL G G L
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353
Query: 224 DVRRFAEEMLNRRI 237
++ + M+ I
Sbjct: 354 EMHALLDLMVRNGI 367
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF-LRVMKGENCFP 62
K G+V +A F +M++ E +++ Y + + +L + D+A + L ++ C
Sbjct: 418 KSGSVDDAMLYFEQMID--EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 63 TLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFR 122
T+ FF++ + K + +L+D+MV IG PN+I Y+ ++ C +D +
Sbjct: 476 TI-FFNSIIHSHCKEGRVIESEKLFDLMVRIGVK--PNVITYSTLIDGYCLAGKMDEATK 532
Query: 123 FFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLL 182
M G PD +TYN + + ++ + F EM+ + P + + L
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Query: 183 DADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
A E++ I ++G ++ N++L GL
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG V+E+ K F MV R P +V+ Y T + ++DEA K L M P
Sbjct: 488 KEGRVIESEKLFDLMV-RIGVKP-NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ +++ + L+ MV G + PN+I YN ++ L +
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVS--PNIITYNIILQGLFHTRRTAAAKEL 603
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ + G + TYN+I L KN E F + + Q I LL
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663
Query: 184 ADEPEFAIEIWNYILENGILP 204
+ A +++ NG++P
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVP 684
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 95/227 (41%), Gaps = 22/227 (9%)
Query: 47 EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNA 106
EA+ F ++KG K S+A+DI+++ ++ ++ + MP++
Sbjct: 121 EAITFTPLLKG---LCADKRTSDAMDIVLR--------RMTEL------SCMPDVFSCTI 163
Query: 107 VVGLLCNNNDVDNVFRFFDQMV---FHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
++ LC+ N M G+ PD ++Y + K + + +HEM+
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 164 KNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLS 223
P + ++ I L + A+E+ +++NG++P + N +L G + +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283
Query: 224 DVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDR--FDSLERR 268
+ F ++M + + VT L RS R FDS+ +R
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG + A F + + ++ P V+++ T + I+ +DE + M P
Sbjct: 148 KEGEIRLAQLVF-DAITKWGLKPS-VVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPD 205
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
+ +S ++ L K + +L+D M+ G L+PN + + ++ C N +D
Sbjct: 206 VYTYSVLINGLCKESKMDEAHELFDEMLEKG--LVPNGVTFTTLIDGHCKNGKLDLAMEI 263
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
+ Q++ G PD +TYN + K + + + EM +P + T I
Sbjct: 264 YKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
+ E A E ++E I + L+ GL GR D + EML+
Sbjct: 324 EGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLS 374
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 4/229 (1%)
Query: 11 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 70
A + F E + R P V Y T L RG ++ EA+ L+ M +C P ++
Sbjct: 447 AKEMFNEALAR-GLKPNRV-TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTL 504
Query: 71 LDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
+ LV+ N +++ D M G+++ N N + L + + F+ +M
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDV--NFDTLNILARGLARVGNHKDASIFYRRMKDR 562
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G + Y + CL ++ E + +EMI + P T I + A
Sbjct: 563 GFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDA 622
Query: 191 IEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILI 239
+ N+++ENGI P S N+L+ N GR D + L R +++
Sbjct: 623 DAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVL 671
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 98/226 (43%), Gaps = 4/226 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
+A K +M++ + P+ V+ Y + L + K +++A L+ M+ C P + ++
Sbjct: 341 DAMKLLDDMIQN-NYAPD-VVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNA 398
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+ L + ++L +M G + PN+ Y + LC +D F++ +
Sbjct: 399 LIQGLCAVRRPEEALELVTLMEQGG--VPPNIYTYTILTHGLCKLRRLDRAKEMFNEALA 456
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
G P+ +TYN + + ++ E + EM +N+ P + T I L+ ++
Sbjct: 457 RGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPD 516
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
A+ + + + G + N+L GL +G D F M +R
Sbjct: 517 ALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDR 562
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Query: 33 ETFLITLIRGKQVDEALKFLRVMKGENCFPTL--KFFSNALDILVKLNDSTHTVQLWDIM 90
+F+++ R + E+L+ +MK P L +++ L LVK L+ M
Sbjct: 255 HSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQM 314
Query: 91 VGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNK 150
+ G + N + Y +++ +++ + D M+ + PD +TY ++ L K K
Sbjct: 315 INNGVSC--NNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRK 372
Query: 151 KVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASAN 210
+ + +M +N +P I L PE A+E+ + + G+ P +
Sbjct: 373 MIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYT 432
Query: 211 VLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
+L GL L RL + E L R + VT L + SR
Sbjct: 433 ILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSR 478
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 30 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDI 89
++Y T + L + Q AL+ LR + G+ P + ++ +D + K+ L+
Sbjct: 178 VSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 237
Query: 90 MVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKN 149
MV G + P+++ YNA++ C + + F++M+F P+ T+N++ + K
Sbjct: 238 MVSKGIS--PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295
Query: 150 KKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASA 209
+++ E +N M+K +P + + E A I+N I + G+ P S
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355
Query: 210 NVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKL 247
++++ G + ++ + +EM I+ VT L
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 6/229 (2%)
Query: 8 VVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 67
V +A F + +R NP ++ +Y + + K+VDEA+ + M N P + +
Sbjct: 333 VNKAKHIFNTISQR-GVNP-NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTY 390
Query: 68 SNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQM 127
++ +D L KL ++ ++L D M G + + I YN+++ LC N+ VD +M
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRG--VPHDKITYNSILDALCKNHQVDKAIALLTKM 448
Query: 128 VFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATA-ITMLLDADE 186
G PD TY + + L KN ++ + F +++ + +N TA I
Sbjct: 449 KDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY-ILDVNIYTAMIQGFCSHGL 507
Query: 187 PEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+ ++++ + + ENG +P + +++ L + + EM+ R
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ G + +A F +M+ FE +V + + + +++ EA L +M +
Sbjct: 256 GFCIVGKMKDATDLFNKMI--FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + +++ +D + + +++ + G N PN+ Y+ ++ C VD
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN--PNIHSYSIMIHGFCKIKKVDEA 371
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F +M + PD +TYN + + L K K+ EM + + +
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
L + + AI + + + GI P + L+ GL GRL D R E++L
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G + A K EM +R P + Y + L L + QVD+A+ L MK E
Sbjct: 396 GLCKLGKISYALKLVDEMHDR--GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 61 FPTLKFFSNALDILVK---LNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDV 117
P + ++ +D L K L D+ + D++V G+ L N+ Y A++ C++
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDAR--IVFEDLLVK-GYILDVNI--YTAMIQGFCSHGLF 508
Query: 118 DNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMI 163
D +M +G P+++TY +I L + + E EMI
Sbjct: 509 DESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMI 554
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 3/235 (1%)
Query: 23 EWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 81
+ NP+ + + L +L++ + R M+ L S ++ +L +
Sbjct: 65 QKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNP 124
Query: 82 HTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNM 141
+ + ++ +G+ PN+I ++ LC + +F D++V G + ++Y
Sbjct: 125 LSFSVLAKILKMGYE--PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 142 IFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENG 201
+ L K + + QP + T I + A ++++ ++ G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 202 ILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
I P + N L+ G +G++ D +M+ I T L F E R
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 4/243 (1%)
Query: 10 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 69
EA +MV+R P+ ++ Y T + L + +D AL L M+ + F+
Sbjct: 206 EAVALVDQMVQR-GCQPD-LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 70 ALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVF 129
+D L K V L+ M G + PN++ YN+++ LCN + R M+
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKG--IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 130 HGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEF 189
P+ +T+N + + K K+ E E EMI+ P + I + +
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 190 AIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKK 249
A +++ +++ LP + N L+ G R+ D EM R ++ VT + +
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 250 AFY 252
F+
Sbjct: 442 GFF 444
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 14/248 (5%)
Query: 30 LAYETFLITL-------IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTH 82
L YE ++TL K++ +A+ + M P F+ + L N ++
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 83 TVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMI 142
V L D MV G P+L+ Y VV LC D+D ++M + + +N I
Sbjct: 207 AVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 143 FECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGI 202
+ L K + V + F EM +P + + I L + A + + +LE I
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 203 LPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESRSMRDRF 262
P + N L+ G+L + + EEM+ R I +T L F M +R
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF-----CMHNRL 379
Query: 263 DSLERRWK 270
D ++ +K
Sbjct: 380 DEAKQMFK 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 7/213 (3%)
Query: 4 KEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPT 63
KEG +VEA K EM++R +P+ + Y + ++DEA + + M ++C P
Sbjct: 340 KEGKLVEAEKLHEEMIQR-SIDPD-TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 64 LKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRF 123
++ ++ ++ K V+L+ M G L+ N + Y ++ D D+
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRG--LVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 124 FDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLD 183
F QMV + D +TY+++ L K+ F + K+E + LN TM+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME---LNIFIYNTMIEG 512
Query: 184 ADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ E W+ I P + N ++ GL
Sbjct: 513 MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL 545
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 103/281 (36%), Gaps = 68/281 (24%)
Query: 44 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIM--VGIGFNLM--- 98
+VD+A+ M FP++ F+ L + K+N + L + M +GI +L
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 99 ----------------------------PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFH 130
P+++ ++++ C++ + + DQMV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 131 GAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
G PD+ T+ + L + K E +M++ QP + T + L + + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 191 IE---------------IWNYILEN--------------------GILPLEASANVLLVG 215
+ I+N I+++ GI P + N L+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 216 LRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L N GR SD R ML ++I VT L AF+ E +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 6/227 (2%)
Query: 28 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLW 87
+V+ Y + + L + +A + L M + P + F+ +D K +L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 88 DIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
+ M+ + P+ I YN ++ C +N +D + F MV P+ TYN +
Sbjct: 352 EEMIQRSID--PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEA 207
K K+V + F EM + + T I A + + A ++ ++ N +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 208 SANVLLVGLRNLGRLSDV----RRFAEEMLNRRILIYDVTMQKLKKA 250
+ ++LL GL + G+L + + + I IY+ ++ + KA
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ + G+ A F +MV P ++ Y L L ++D AL + ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVS--NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ ++ ++ + K + + WD+ + ++ P+++ YN ++ LC+ +
Sbjct: 500 ELNIFIYNTMIEGMCK---AGKVGEAWDLFCSL--SIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 121 FRFFDQMVFHGAFPDSLTYNMI 142
F +M G P+S TYN +
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTL 576
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G EG+V A + F E + + P+ V+ Y + + L R + AL+ + M + C
Sbjct: 263 GLCAEGDVERALELFNEAQAK-DLKPDLVV-YNSLVKGLCRQGLILHALQVMNEMVEDGC 320
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P + ++ ++ L K+ + + + + + G+ +P++ +N ++ C +D+
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY--LPDVFTFNTMIDGYCKRLKLDSA 378
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++M +G PD++TYN + L K K EV F EMI +P + I
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRL 222
++ E A + + ++G++P S N L+ G G L
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 33/238 (13%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V+ Y T + L + +V EA ++LR M + C P ++ +D K + +L
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243
Query: 89 IMVGIGF---------------------------------NLMPNLIMYNAVVGLLCNNN 115
+ GF +L P+L++YN++V LC
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303
Query: 116 DVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCA 175
+ + + ++MV G PD TYN++ L K + + ++ I + P
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363
Query: 176 TAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEML 233
T I + + A+++ + GI P + N +L GL G+ +V EEM+
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%)
Query: 97 LMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVE 156
+ P+++ YN ++ LC ++ V ++ +M+ G PD TYN I + K + E
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 157 NFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGL 216
+ I + P + + I L + E A+E++N + P N L+ GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 217 RNLGRLSDVRRFAEEML 233
G + + EM+
Sbjct: 300 CRQGLILHALQVMNEMV 316
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 80/223 (35%), Gaps = 41/223 (18%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G E N+TF EM+ + + + Y + + Q++EA + M +
Sbjct: 403 GLCKAGKAKEVNETFEEMI--LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460
Query: 61 FP-TLKF------------FSNALDILVKLNDSTH--TVQLWDIMVG------------- 92
P T+ F A + KL++ + T ++I++G
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520
Query: 93 -----IGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLI 147
I P+L Y +V C +VD + +MV G P T+ + L
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580
Query: 148 KNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFA 190
N +V E H M++ P + +L D+ E A
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVP------EVVDTILSTDKKEIA 617
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 6/156 (3%)
Query: 17 EMVER---FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDI 73
++VER + P+ + Y + L L + + E + M + C P ++ ++
Sbjct: 380 QLVERMWMYGIAPD-AITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 74 LVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAF 133
K+N + M G L+P+ I +N ++ C N D+D + F ++ G
Sbjct: 439 FCKINQLEEASGVIVRMSQDG--LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496
Query: 134 PDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQP 169
+ T+N++ + E F EMI ++P
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 5/227 (2%)
Query: 26 PEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQ 85
P AY + L+ D+A K M P + + + ++
Sbjct: 7 PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66
Query: 86 LWDIMVGIGFNLMPNLIMYNAVV-GLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFE 144
L + G ++ P + Y VV GL + + D FD+M+ FPD T+N +
Sbjct: 67 LLRSLPERGCDVKP--LAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 145 CLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILP 204
L + + E +++K C I L + E A+ + ++ I P
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVES-MDAYIAP 182
Query: 205 LEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAF 251
+ N L+ GL ++ + ++ M+N+ + D T + +
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGY 229
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K + + + M+ + H+ Y + L R + ++ A L ++
Sbjct: 602 GYFKSNDYEKVSSILQSMLGSGDKPDNHI--YGIVIRNLSRSENMEVAFMVLTEVEKNGL 659
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +S+ + L K+ D V L D M G L P ++ YNA++ C + D+
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG--LEPGIVCYNALIDGFCRSGDISRA 717
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
FD ++ G P+ +TY + + KN + + + + EM+ P T
Sbjct: 718 RNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG 777
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
DA + E A+ + + G + + N L+ G G+L + + M++R I+
Sbjct: 778 CSDAADLEQALFLTEEMFNRGYANV-SLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPN 836
Query: 241 DVTMQKLKKAF 251
T++K+ F
Sbjct: 837 AQTVEKVVSEF 847
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Query: 35 FLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIG 94
L L+R ++ K M+G P + +S ++ K D ++++ M
Sbjct: 214 LLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD 273
Query: 95 FNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHE 154
+ N + YN ++ LC + V+ F F ++MV +G PD+ TY + L K ++ E
Sbjct: 274 CAM--NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKE 331
Query: 155 VENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLV 214
+ EM + +P + T + + + A +I ++ G+ P + + L+
Sbjct: 332 AKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIR 391
Query: 215 GLRNLGRLSDVRRFAEEML 233
GL +G+L + +EM+
Sbjct: 392 GLCKIGQLGRASKLLKEMI 410
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 91/234 (38%), Gaps = 4/234 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG EA EM+ P ++ Y+ + L + Q+ A K L+ M
Sbjct: 357 GFMKEGKTAEAFDILKEMISA-GVQPNKIM-YDNLIRGLCKIGQLGRASKLLKEMIKVGL 414
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P ++ + + +D +L + M G ++PN+ Y ++ LC N +
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG--ILPNVYSYGIMINGLCQNGESKEA 472
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
++M+ G P++ Y + K + +M K P + I
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLN 234
L E A E + + + G++P E + + L+ G G L + +MLN
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 2/187 (1%)
Query: 29 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWD 88
V Y TF+ + + D A K M+ +C ++ + L + +
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 302
Query: 89 IMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIK 148
MV G L P+ Y A++ LC + + D+M G P+ + Y + + +K
Sbjct: 303 EMVDYG--LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360
Query: 149 NKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEAS 208
K E + EMI QP + I L + A ++ +++ G+ P +
Sbjct: 361 EGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420
Query: 209 ANVLLVG 215
N L+ G
Sbjct: 421 YNPLMQG 427
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 4/247 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G KEGN+ A + +M + +P+ + Y + + L +++EA ++ ++
Sbjct: 497 GHSKEGNISLACEALEKMT-KANVHPD-LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL 554
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +S + K + QL M+ G L PN Y ++ +ND + V
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG--LKPNADTYTDLLEGYFKSNDYEKV 612
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
M+ G PD+ Y ++ L +++ + E+ KN P ++ I+
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 672
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L + E A+ + + + + G+ P N L+ G G +S R + +L + ++
Sbjct: 673 LCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN 732
Query: 241 DVTMQKL 247
VT L
Sbjct: 733 CVTYTAL 739
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 6/267 (2%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G + G EA EM+ E + Y +I + + A + L M N
Sbjct: 462 GLCQNGESKEAGNLLEEMIS--EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L +++ + L + + + + G L+P+ Y+ ++ C +++
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG--LVPDEFTYSGLIHGYCKTGNLEKA 577
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ QM+ G P++ TY + E K+ +V + M+ + +P I
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L ++ E A + + +NG++P + L+ GL + + +EM +
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697
Query: 241 DVTMQKLKKAFYNESRSMRDR--FDSL 265
V L F R R FDS+
Sbjct: 698 IVCYNALIDGFCRSGDISRARNVFDSI 724
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 17 EMVERFEWNPE--HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 74
EM E E N AY T ++ + DEA L + + P++ ++ L L
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 75 VKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFP 134
K+ +++++ M + PNL YN ++ +LC +D F D M G FP
Sbjct: 354 RKMGKVDEALRVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFP 410
Query: 135 DSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIW 194
+ T N++ + L K++K+ E F +M P + + I L + A +I+
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIY 470
Query: 195 NYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
+L++ L+ N GR D + ++M+N+
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQ 511
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 12/258 (4%)
Query: 20 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 79
+R + + V+AY L L + +VDEAL+ MK ++ P L ++ +D+L +
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGK 392
Query: 80 STHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTY 139
+L D M G L PN+ N +V LC + +D F+QM + PD +T+
Sbjct: 393 LDCAFELRDSMQKAG--LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITF 450
Query: 140 NMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILE 199
+ + L K +V + + +M+ ++ + + + I + E +I+ ++
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510
Query: 200 NGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRIL----IYDVTMQKLKKA-FYNE 254
P N + + G R EE+ +RR + Y + + L KA F NE
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANE 570
Query: 255 S----RSMRDRFDSLERR 268
+ SM+++ L+ R
Sbjct: 571 TYELFYSMKEQGCVLDTR 588
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ K G V +A + EM + + P V+ Y + + L + ++DEA K +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTK-GFEPT-VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
+ +S+ +D K+ + + ++ G L PN+ +N+++ L +++
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG--LTPNVYTWNSLLDALVKAEEINEA 711
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
F M P+ +TY ++ L K +K ++ F+ EM K +P+ ++ T I+
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNRRILIY 240
L A A +++ NG +P A N ++ GL N R D EE R + I+
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIH 831
Query: 241 DVT 243
+ T
Sbjct: 832 NKT 834
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 40/291 (13%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G+ KEG V A EM + + + VL Y + + + +VD A KF ++
Sbjct: 212 GFAKEGRVDSALSLLDEM-KSSSLDADIVL-YNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P +++ + +L K N V++++ + +P YN ++ + D
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLE--KNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ ++ G+ P + YN I CL K KV E F EM K + P I M
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDM 386
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANV----------------------------- 211
L A + + A E+ + + + G+ P + N+
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPD 446
Query: 212 ------LLVGLRNLGRLSDVRRFAEEMLNRRILIYDVTMQKLKKAFYNESR 256
L+ GL +GR+ D + E+ML+ + L K F+N R
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Query: 36 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGF 95
+++ ++ ++ E ++ M+ P ++ + +N S + L+ M +G+
Sbjct: 140 VLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 96 NLMPNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEV 155
P + ++ ++ VD+ D+M D + YN+ + K KV
Sbjct: 200 E--PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 156 ENFFHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVG 215
FFHE+ N +P + + I +L A+ + A+E++ ++ +N +P + N +++G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 216 LRNLGRLSDVRRFAEEMLNR----RILIYDVTMQKLKK 249
+ G+ + E + ++ Y+ + L+K
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 39 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLM 98
L + +++DEA M + C P F + +D L K+ ++++ M + +
Sbjct: 422 LCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM--LDSDCR 479
Query: 99 PNLIMYNAVVGLLCNNNDVDNVFRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENF 158
N I+Y +++ N+ ++ + + MV PD N +C+ K + +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 159 FHEMIKNEWQPTPLNCATAITMLLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRN 218
F E+ + P + + I L+ A E++ + E G + + N+++ G
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 219 LGRLSDVRRFAEEM 232
G+++ + EEM
Sbjct: 600 CGKVNKAYQLLEEM 613
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 1 GWEKEGNVVEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 60
G K G V +A K + +M++ + + Y + + + ++ K + M +NC
Sbjct: 456 GLGKVGRVDDAYKIYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513
Query: 61 FPTLKFFSNALDILVKLNDSTHTVQLWDIMVGIGFNLMPNLIMYNAVVGLLCNNNDVDNV 120
P L+ + +D + K + +++ + F +P+ Y+ ++ L +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF--VPDARSYSILIHGLIKAGFANET 571
Query: 121 FRFFDQMVFHGAFPDSLTYNMIFECLIKNKKVHEVENFFHEMIKNEWQPTPLNCATAITM 180
+ F M G D+ YN++ + K KV++ EM ++PT + + I
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 181 LLDADEPEFAIEIWNYILENGILPLEASANVLLVGLRNLGRLSDVRRFAEEMLNR 235
L D + A ++ I + L+ G +GR+ + EE++ +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,199,411,240
Number of Sequences: 23463169
Number of extensions: 168152641
Number of successful extensions: 558375
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3561
Number of HSP's successfully gapped in prelim test: 1526
Number of HSP's that attempted gapping in prelim test: 513667
Number of HSP's gapped (non-prelim): 26150
length of query: 274
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 134
effective length of database: 9,074,351,707
effective search space: 1215963128738
effective search space used: 1215963128738
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)