BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048738
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 21/291 (7%)
Query: 4 ESLLCDELWLSDPASTADCYSDKKPKQCNILESCECECDGTSFYKTKEECEEAAIICLEK 63
++LLC+E W + P + + + N + E D + EEA + LEK
Sbjct: 2 DNLLCEESWPASPLTPEPLPNFRHRSHDNDVVKMYPEIDAATM-------EEAIAMDLEK 54
Query: 64 ELSYMPEPG-YVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKS 122
EL + +VE+ S L +RF A QWLI+ + +SY + N D +
Sbjct: 55 ELCFNNHGDKFVEFF-VSKKLTDYRFHAFQWLIQTR-SRLNLSYET-VFSAANCFD--RF 109
Query: 123 VYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRME 182
VY+TC EW WMVELV+V LSIASKFN+ ++P L E++ME L + F +T+ +ME
Sbjct: 110 VYMTCC---DEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQME 166
Query: 183 LTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPSVV 242
L +L++L WR+ +T+Y++ + L++ + H+ T H+ D ++L+Y PSVV
Sbjct: 167 LIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHMIMNRITNHLLDVICDLKMLQYPPSVV 226
Query: 243 AVSALWCSLDELTASSCAHVAFITRLFNQEQKDDVVRCNMIMKSRLVDPLS 293
A +A+W +++ I LF Q K+ +V+C MK+R +D S
Sbjct: 227 ATAAIWILMEDKVCRES-----IMNLFEQNHKEKIVKCVDGMKNRDIDHQS 272
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 19/185 (10%)
Query: 133 EWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEE-LDYSFQSSTIRRMELTLLQSLGW 191
+W+ WMVE+VSV CLS+A K ++ + PSLH++QMEE + +SF++STIR MELTLL++L W
Sbjct: 124 KWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMGHSFRASTIRDMELTLLKALRW 183
Query: 192 RLGCITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPSVVAVSALWCSL 251
RL C+T +S++ + T + L + L D L++ S++A SAL +L
Sbjct: 184 RLACVTPFSFLPVTTTTTTTRALLLRSLL----------DPSFLRFDASLLAASAL--TL 231
Query: 252 DELTASSCAHVAFITRLFNQEQKDD--VVRCNMIMKSRLVDPLSNLIVCGQPYSNWPSSP 309
T H+ + RL + + D V C +MK+ +D N G+ + SP
Sbjct: 232 SSTTPQHPNHL-LLNRLIHPFSQTDHEVKECFNMMKALHLDMSKNP---GRSSDHPCWSP 287
Query: 310 VTVLL 314
++V++
Sbjct: 288 ISVVI 292
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 141/269 (52%), Gaps = 24/269 (8%)
Query: 52 ECEEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLL 111
+ +E + +EKE+ + P+ GY+E L+ +R AI W+ KV Y SL+L
Sbjct: 60 DSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYL- 118
Query: 112 FPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDY 171
N +D +++ P + + WM +L+SV+CLS+A+K +T P ++Q+ + +Y
Sbjct: 119 -AVNYLD----RFLSSFNLPHD-ESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEY 172
Query: 172 SFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLE---FHLHNELTTLHINQT 228
F++ I+RMEL ++++L WRL +T +S++ L F+ + + L + + L + T
Sbjct: 173 VFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASWCSDLTVG-T 231
Query: 229 NADARLLKYQPSVVAVSALWCSLDELTASSCAHVAFITRLFNQE---QKDDVVRC-NMIM 284
D+R L ++PS +A + + L E + F + L E K+ V+RC +++
Sbjct: 232 LKDSRFLSFRPSEIAAAVVLAVLAE-----NQFLVFNSALGESEIPVNKEMVMRCYELMV 286
Query: 285 KSRLVDPLSNLIVCGQPYSNWPSSPVTVL 313
+ LV + N S+ P SP+TVL
Sbjct: 287 EKALVKKIRN----SNASSSVPHSPITVL 311
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 46 FYKTKEECEEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFR--AIQWLIKVPIPYVL 103
F + EEC + + E+E ++MP Y E L R R AI W+ +V Y
Sbjct: 70 FPRQSEECVASLV---EREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNF 126
Query: 104 ISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHE 163
S + +L N +D S Y E + WM +L+SVACLSIA+K +T P +
Sbjct: 127 SSVTAYL--AVNYLDRFLSQY-----ELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLD 179
Query: 164 IQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNEL--T 221
+Q+ E + F+ TI RMEL +L +L WR+ +T +SY++ L +S + L +
Sbjct: 180 LQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRS 239
Query: 222 TLHINQTNADARLLKYQPSVVAVSALWCSLDELTASSCAHVAFITRLFNQEQKDDVVRCN 281
+ I + A L+++PS +A + E T +A F K V++C
Sbjct: 240 SELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIA---EAFTHVDKGRVLQCQ 296
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 43 GTSFYKTKEECEEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFR----AIQWLIKVP 98
G F EEC +E E +MP Y E L R AI W+ KV
Sbjct: 58 GVDFAVPSEEC---VARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVH 114
Query: 99 IPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSS 158
Y L N +D S+Y + K WM +L++VACLS+A+K +T
Sbjct: 115 SYYSFAP--LTACLAVNYLDRFLSLYQL-----PDGKDWMTQLLAVACLSLAAKMEETDV 167
Query: 159 PSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDS 211
P ++Q+ E Y F++ TI+RMEL +L +L WR+ +T +SYV+ L +
Sbjct: 168 PQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNG 220
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 52/254 (20%)
Query: 56 AAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRA--IQWLIKV-------PI-PYVLIS 105
A +I E E S+ P Y L +S RA + W++KV P+ Y+ +S
Sbjct: 84 AELIGGEAERSHSPRADYPGRL-RSGRPADLAARADSVAWILKVRELYGMLPVTAYLAVS 142
Query: 106 Y-----SLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPS 160
Y SLH L P N W ++L++V CLS+A+K +T PS
Sbjct: 143 YMDRFLSLHRL-PGNG--------------------WAMQLLAVTCLSLAAKMEETLVPS 181
Query: 161 LHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHN-- 218
+ ++QME+ Y F+ TI RMEL +L +L WRL IT ++++ L D H+
Sbjct: 182 ILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELI 241
Query: 219 ------ELTTLHINQTNADARLLKYQPSVVAVSALWCSLDELTA-SSCAHVAFITRLFNQ 271
L T+H D L + PS +A +A+ C+ E+ S H ++
Sbjct: 242 HQATQVTLATIH------DTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIG 295
Query: 272 EQKDDVVRCNMIMK 285
++ ++RC +M+
Sbjct: 296 LDEEAIIRCYRLMQ 309
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 39 CECDGTSFYKTKEECEEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVP 98
C G Y E + E Y P Y + L + P R ++ W++KV
Sbjct: 39 CSVGGEELYSAASIAE-----LIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQ 93
Query: 99 IPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSS 158
+ + +L N +D S+ E + W ++L++VACLS+A+K +T
Sbjct: 94 EYNGFLPLTAYL--AVNYMDRFLSLR-----HLPEGQGWAMQLLAVACLSLAAKMEETLV 146
Query: 159 PSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHN 218
PSL ++Q+E Y F+ TI RME +L +L WRL +T +++++ H+ N
Sbjct: 147 PSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK------HISN 200
Query: 219 ELTTLHINQTNADARLLKYQPSVVAVSALWCSLDE 253
+ + N+D + L + PS +A +A+ C+ E
Sbjct: 201 AM----VQNANSDIQFLDHCPSSMAAAAVLCATGE 231
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 87 RFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVAC 146
R A+ W+++V Y +L + +D C S K WM++LVSVAC
Sbjct: 87 RKEAVGWILRVNAHYGF--STLAAVLAITYLD-----KFICSYSLQRDKPWMLQLVSVAC 139
Query: 147 LSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLL 206
LS+A+K +T P L + Q+EE Y F++ TI+RMEL +L +L W++ IT S+V+ ++
Sbjct: 140 LSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHII 199
Query: 207 TNFDSLEFHLH-NELTTLH--INQTNADARLLKYQPSVVAVSAL 247
L+ + H + L H + +D+R + Y PSVVA + +
Sbjct: 200 RRL-GLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATM 242
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 57 AIIC-LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTN 115
+I C +E E ++P Y+ + R ++ W++KV Y + +L N
Sbjct: 51 SIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYL--AVN 108
Query: 116 RVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQS 175
+D + +Y + E W ++L++VACLS+A+K + PSL + Q+ + Y F++
Sbjct: 109 YMD--RFLYARRL---PETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEA 163
Query: 176 STIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDS----LEFHLHNELTTLHINQTNAD 231
TI+RMEL +L L WRL +T + ++ D L F + + + N +
Sbjct: 164 KTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIK--E 221
Query: 232 ARLLKYQPSVVAVSALWCSLDELTASSCA---HVAFITRLFNQEQKDDVVRCNMIMKSRL 288
A L+Y PS +A +A+ C +EL + S H + T + K+ +VRC +MK+
Sbjct: 222 ASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWC-DGLSKEKIVRCYRLMKAMA 280
Query: 289 VD 290
++
Sbjct: 281 IE 282
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 49 TKEECEEAAIICLEKELSYMPEPGYVEYLDQSN-NLPHFRFRAIQWLIKVPIPYVLISYS 107
++ E EE + +EKE ++P Y++ L + +L R A+ W+ K +
Sbjct: 39 SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWK--------ACE 90
Query: 108 LHLLFP------TNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSL 161
+H P N +D SV+ K W+++L++VACLS+A+K +T P L
Sbjct: 91 VHQFGPLCFCLAMNYLDRFLSVH-----DLPSGKGWILQLLAVACLSLAAKIEETEVPML 145
Query: 162 HEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNELT 221
++Q+ + + F++ +++RMEL +L L WRL IT SY+ L + N L
Sbjct: 146 IDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLI 205
Query: 222 TLH---INQTNADARLLKYQPSVVAVSALWCSLDELTASSCAHVAFITRLFNQEQKDDVV 278
+ I T L+++PS VA + EL + +F + LF+ QK+ V
Sbjct: 206 SRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF-SPLFSLLQKERVK 264
Query: 279 RCNMIMKS 286
+ +++S
Sbjct: 265 KIGEMIES 272
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 87 RFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVAC 146
R A+ W+++V Y S L + N D ++T + + K WM +LV+VA
Sbjct: 96 RKEALDWVLRVKSHYGFTS--LTAILAVNYFD----RFMTSIKLQTD-KPWMSQLVAVAS 148
Query: 147 LSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLL 206
LS+A+K + P L ++Q+EE Y F++ TI+RMEL +L +L WR+ +T S+ + ++
Sbjct: 149 LSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHII 208
Query: 207 TNFDS-----LEFHLHNELTTLHINQTNADARLLKYQPSVVAVSALWCSLDELTASSCAH 261
F S L+F E + + AD R ++Y PSV+A + + +EL C
Sbjct: 209 RRFGSKWHQQLDFCRKCERLLISV---IADTRFMRYFPSVLATAIMILVFEEL--KPCDE 263
Query: 262 VAF---ITRLF--NQEQ 273
V + IT L NQE+
Sbjct: 264 VEYQSQITTLLKVNQEK 280
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
L +E+ + P YV+ L + R +A+ W++KV Y L + N +D
Sbjct: 71 LVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHF--GHLCICLSMNYLD-- 126
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
++T P + K W +L++V+CLS+ASK +T P + ++Q+E+ + F++ TI+R
Sbjct: 127 --RFLTSYELPKD-KDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKR 183
Query: 181 MELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNEL---TTLHINQTNADARLLKY 237
MEL ++ +L WRL +T +S+++ + D + H+ L ++ I T L +
Sbjct: 184 MELLVVTTLNWRLQALTPFSFIDYFV---DKISGHVSENLIYRSSRFILNTTKAIEFLDF 240
Query: 238 QPS 240
+PS
Sbjct: 241 RPS 243
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 25/237 (10%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLP---HFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRV 117
+EKE+ M E EYL + +N R AI W+ KV Y +L
Sbjct: 75 MEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVN---- 130
Query: 118 DIKKSVYVTCVLSPAEWKY-----WMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYS 172
Y+ LS E+ WM +L+ VACLS+A+K +T++P ++Q+ +Y
Sbjct: 131 ------YLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYV 184
Query: 173 FQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDS---LEFHLHNELTTLHINQTN 229
F + TI RME+ +L +L WR+ +T ++Y+ L + + L + T + ++
Sbjct: 185 FDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMK 244
Query: 230 ADARLLKYQPSVVAVS-ALWCSLDELTASSCAHVAFITRLFNQEQKDDVVRCNMIMK 285
A L+++PS +A + AL D V ++L KD+V RC+ M+
Sbjct: 245 ATV-FLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKL--PVDKDNVGRCHQAMQ 298
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 51 EECEEAAIICLEKELSYMPEPGYVEYL---DQSNNLPHFRFRAIQWLIKVPIPYVLISYS 107
++C EA + +E ++P GY++ L +L R AI W+ KV Y
Sbjct: 53 DDCIEA--LLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKF--GP 108
Query: 108 LHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQME 167
L + N +D SV+ P E + M +L++VA LS+A+K +T P ++Q+
Sbjct: 109 LTAVLSVNYLDRFLSVFDL----PQE-EACMTQLLAVASLSLAAKMEETVVPHPLDLQVC 163
Query: 168 ELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNEL--TTLHI 225
+ Y F++ TI+RMEL +L +L WR+ +T S+++ L F+ + + L + I
Sbjct: 164 DAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLI 223
Query: 226 NQTNADARLLKYQPSVVAVSALWCSLDELTASSCAHVAFITRLFNQEQKDDVVRCNMIMK 285
T A L ++PS +A S +L+E S VA + +K+ V+RC +++
Sbjct: 224 LSTCKVAEFLVFRPSEIAASVALVALEEHETSMFERVA---TCYKNLKKERVLRCYEMIQ 280
Query: 286 SRLVDPLSNLI--VCGQPYSNWPSSPVTVL 313
+++ + N++ G +S P SP+ VL
Sbjct: 281 DKII--MRNIMRQSAGSVFS-IPKSPIGVL 307
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 87 RFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVAC 146
R +A+ W+ KV Y SL L N D ++T + K WM +L ++AC
Sbjct: 86 REKALDWIFKVKSHYGF--NSLTALLAVNYFD----RFITSRKFQTD-KPWMSQLTALAC 138
Query: 147 LSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLL 206
LS+A+K + P L + Q+EE Y F++ TI+RMEL +L +L WR+ +T S+ + ++
Sbjct: 139 LSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHII 198
Query: 207 TNFDSLEFHLHNELTTLH-----INQTNADARLLKYQPSVVAVSAL 247
+ F H++L L + D+R L + PSV+A + +
Sbjct: 199 RRYS---FKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIM 241
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 52 ECEEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLL 111
E EE +EKE + P Y++ L + + R +A+ W+ K L L +
Sbjct: 34 ESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEE--LQFGPLCIC 91
Query: 112 FPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDY 171
N +D SV+ K W V+L++VACLS+A+K +T+ P L ++Q+ +
Sbjct: 92 LAMNYLDRFLSVH-----DLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMF 146
Query: 172 SFQSSTIRRMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNELTTLH---INQT 228
F++ +++RMEL +L L WRL +T SYV L+ + + H+ L T I T
Sbjct: 147 VFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIAST 206
Query: 229 NADARLLKYQPSVVAVS 245
L+++ S +A +
Sbjct: 207 TKGIDFLEFRASEIAAA 223
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 137 WMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCI 196
W +L+ VACLS+A+K ++S+P L ++Q+E + F+ TI+RMEL +L L WRL +
Sbjct: 167 WASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSV 226
Query: 197 TTYSYVELLLTNFDS 211
T +++V+ S
Sbjct: 227 TPFAFVDFFACKVGS 241
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 137 WMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCI 196
W L+S+AC+S+A+K + SP+L E F S +IRRMEL +L +LGWR+G +
Sbjct: 144 WAARLLSIACVSVAAKMEEYQSPALSEFDAGG-GRVFCSDSIRRMELLVLSTLGWRMGAV 202
Query: 197 TTYSYV 202
T + ++
Sbjct: 203 TPFDFL 208
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 137 WMVELVSVACLSIASKFNDTSSPSLHEIQMEELD--YSFQSSTIRRMELTLLQSLGWRLG 194
W L++VAC+S+A+K + +P+L E + D Y F IRRMEL +L +L WR+
Sbjct: 153 WAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMA 212
Query: 195 CITTYSYVELL 205
+T + Y+ L
Sbjct: 213 AVTPFDYLPCL 223
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 135 KYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLG 194
K W ++L+SVACLS+A+K + P L E +++ D +++ RMEL +L +L W++
Sbjct: 141 KEWALQLLSVACLSLAAKVEERRPPRLPEFKLDMYD----CASLMRMELLVLTTLKWQMI 196
Query: 195 CITTYSYVELLLTNFDSLEFHLHNELTTLHINQTN---ADARLL---KYQPSVVAVSALW 248
T +SY+ F H+E + + A +++ YQPS +A++A+
Sbjct: 197 TETPFSYLNCFTAKFR------HDERKAIVLRAIECIFASIKVISSVGYQPSTIALAAIL 250
Query: 249 CSLDELTA 256
+ ++ TA
Sbjct: 251 IARNKETA 258
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 137 WMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCI 196
W + L+SVACLS+A+K + P L + + D+ F+ IR+ EL +L +L W++ I
Sbjct: 117 WAMRLLSVACLSLAAKMEERIVPGLSQYPQDH-DFVFKPDVIRKTELLILSTLDWKMNLI 175
Query: 197 TTYSYVELLLTN 208
T + Y L
Sbjct: 176 TPFHYFNYFLAK 187
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 135 KYWMVELVSVACLSIASKFNDTSSPSLHEIQM---EELD----YSFQSSTIRRMELTLLQ 187
+ WM L +VAC+++A+K +T P L ++Q+ E D Y F+ T+RRMEL +L
Sbjct: 120 RPWMARLAAVACVALAAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLS 179
Query: 188 SLGWRLGCITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPS 240
+LGWR+ +T SY++ LL + H H + L + D R +++PS
Sbjct: 180 ALGWRMHPVTPLSYLQPLLGTAHAARLH-HCDTALLALMP---DWRWPRHRPS 228
>sp|Q3ECW2|CCA34_ARATH Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1
Length = 370
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
+E + + P P Y+E + QS+ PH R + WL++V Y L+S +L+L
Sbjct: 106 MEGKPKHRPLPDYIEKV-QSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTIS------- 157
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
YV LS ++LV V+ + IAS+ + P E D +F +
Sbjct: 158 ---YVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVS 214
Query: 181 MELTLLQSLGWRLGCITTYSYVELL--LTNFDSLEFHLHNELTTLHINQTNA-DARLLKY 237
ME +L +L + LG T +++ + D + L E ++++ + D +KY
Sbjct: 215 MEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLSELSMLDYTCVKY 274
Query: 238 QPSVVAVSALWCS 250
PS+++ SA++ +
Sbjct: 275 LPSLLSASAVFLA 287
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 135 KYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLG 194
K W+++L+S++C+S+++K P + + F + I RME +L +L WR+
Sbjct: 98 KPWILKLISLSCVSLSAKMR---KPDMSVSDLPVEGEFFDAQMIERMENVILGALKWRMR 154
Query: 195 CITTYSYVELLLTNFD-------SLEFHLHNELTTLHINQTNADARLLKYQPSVVAVSAL 247
+T +S++ ++ F+ L+ L ++ + L + + D L+++PSV+A +AL
Sbjct: 155 SVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQH-DISFLEFKPSVIAGAAL 213
Query: 248 WCSLDEL 254
+ EL
Sbjct: 214 LFASFEL 220
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
EL P Y+E L Q + P R I WL++V Y L+ +L+L N +D
Sbjct: 184 ELQQRPLANYME-LVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLT--VNLID----- 235
Query: 124 YVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMEL 183
LS + + ++L+ V+C+ IASK+ + S+P + E + ++ + ME+
Sbjct: 236 ---RFLSNSYIERQRLQLLGVSCMLIASKYEELSAPGVEEFCFITAN-TYTRPEVLSMEI 291
Query: 184 TLLQSLGWRLGCITTYSYVELLLTN--------FDSLEFHLHNELTTLHINQTNADARLL 235
+L + +RL TT +++ + F LE+ L N L L T + L
Sbjct: 292 QILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEY-LANYLAEL----TLVEYSFL 346
Query: 236 KYQPSVVAVSALWCS 250
++ PS++A SA++ +
Sbjct: 347 RFLPSLIAASAVFLA 361
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 23/232 (9%)
Query: 24 SDKKPKQCNILESCECECDGTSFYKTKEECEEAAIICLEKELSYMPEPGYVEYLDQSNNL 83
+D KP + L + + D + E + EL P Y+E L Q +
Sbjct: 199 ADSKPGDSSGLGFIDIDNDNGNPQMCASYASEIYTNLMASELIRRPRSNYMEAL-QRDIT 257
Query: 84 PHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVS 143
R I WL++V Y L+ +L+L N +D LS + ++L+
Sbjct: 258 KGMRGILIDWLVEVSEEYKLVPDTLYLTI--NLIDR--------FLSQHYIERQKLQLLG 307
Query: 144 VACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVE 203
+ + IASK+ + +P + E D ++ + + +ME +L +G+ L TT +++
Sbjct: 308 ITSMLIASKYEEICAPRVEEFCFI-TDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLR 366
Query: 204 LLLT------NFDSLEF-HLHNELTTLHINQTNADARLLKYQPSVVAVSALW 248
L N S+ +L N L L T D LK+ PSVVA SA++
Sbjct: 367 RFLRAAQASRNVPSITLGYLANYLAEL----TLIDYSFLKFLPSVVAASAVF 414
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 41 CDGTSFYKTKEECEEAA----IICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIK 96
CD + Y+ + C A + E E P ++E L + N P R I WL++
Sbjct: 208 CDVDNNYEDPQLCATLASDIYMHLREAETRKHPSTDFMETLQKDVN-PSMRAILIDWLVE 266
Query: 97 VPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDT 156
V Y L+ +L+L Y+ LS E ++L+ VAC+ IA+K+ +
Sbjct: 267 VAEEYRLVPDTLYLTV----------NYIDRYLSGNEINRQRLQLLGVACMLIAAKYKEI 316
Query: 157 SSPSLHEIQMEEL----DYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVE--LLLTNFD 210
+P Q+EE D ++ + ME ++L L + + T ++ + +
Sbjct: 317 CAP-----QVEEFCYITDNTYFRDEVLEMEASVLNYLKFEMTAPTAKCFLRRFVRVAQVS 371
Query: 211 SLEFHLHNELTTLHINQTNA-DARLLKYQPSVVAVSALW 248
+ LH E ++ + + + LL Y PS+VA SA++
Sbjct: 372 DEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIF 410
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 41 CDGTSFYKTKEECEEAA----IICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIK 96
CD + Y+ + C A + E E P ++E + + N P R I WL++
Sbjct: 195 CDVDNNYEDPQLCATLASDIYMHLREAETRKRPSTDFMETIQKDVN-PSMRAILIDWLVE 253
Query: 97 VPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDT 156
V Y L+ +L+L Y+ LS E ++L+ VAC+ IA+K+ +
Sbjct: 254 VAEEYRLVPDTLYLTV----------NYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEI 303
Query: 157 SSPSLHEIQMEEL----DYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVE--LLLTNFD 210
+P Q+EE D ++ + ME ++L L + + T ++ + +
Sbjct: 304 CAP-----QVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVS 358
Query: 211 SLEFHLHNELTTLHINQTNA-DARLLKYQPSVVAVSALW 248
+ LH E ++ + + + LL Y PS+VA SA++
Sbjct: 359 DEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIF 397
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 62 EKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKK 121
E E P ++E + + N P R I WL++V Y L+ +L+L
Sbjct: 250 EAETRKRPSTDFMETIQKDVN-PSMRAILIDWLVEVAEEYRLVPDTLYLTV--------- 299
Query: 122 SVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEEL----DYSFQSST 177
Y+ LS E ++L+ VAC+ IA+K+ + +P Q+EE D ++
Sbjct: 300 -NYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAP-----QVEEFCYITDNTYFRDE 353
Query: 178 IRRMELTLLQSLGWRLGCITT----YSYVELLLTNFDSLEFHLH------NELTTLHINQ 227
+ ME ++L L + + T +V + + + HL EL+ L N
Sbjct: 354 VLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYN- 412
Query: 228 TNADARLLKYQPSVVAVSALW 248
LL Y PS+VA SA++
Sbjct: 413 ------LLSYPPSLVAASAIF 427
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
EL P Y+ + Q + P R I WL++V Y L+S +L+L N +D
Sbjct: 191 ELEQRPSTSYMVQV-QRDIDPTMRGILIDWLVEVSEEYKLVSDTLYL--TVNLID----- 242
Query: 124 YVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMEL 183
+S + ++L+ + C+ IASK+ + S+P L E D ++ + ME+
Sbjct: 243 ---RFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCF-ITDNTYTRLEVLSMEI 298
Query: 184 TLLQSLGWRLGCITTYSYVELLLTNF---DSLEFHLHNELTTLHINQTNADARLLKYQPS 240
+L SL +RL TT +++ + D + L T + L++ PS
Sbjct: 299 KVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPS 358
Query: 241 VVAVSALWCS 250
++A SA++ +
Sbjct: 359 LIAASAVFLA 368
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 137 WMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCI 196
W L++++CL++A+K ++ S +IQ E ++ F + I+RME +L +L WR +
Sbjct: 102 WAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMFDEAKIQRMEQMVLNALEWRTRSV 160
Query: 197 TTYSYVELLLT 207
T +++ L+
Sbjct: 161 TPLAFLGFFLS 171
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
E P +VE + Q N R I WL++V Y L+ +L+L
Sbjct: 96 ETKKRPSTDFVETI-QKNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVN---------- 144
Query: 124 YVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEEL----DYSFQSSTIR 179
Y+ LS ++L+ VACL IASK+ + P Q+EEL D ++ +
Sbjct: 145 YIDRYLSSKVINRRKMQLLGVACLLIASKYEEICPP-----QVEELCYISDNTYTKDEVL 199
Query: 180 RMELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFH--LHNELTTLHINQTN-ADARLLK 236
+ME ++L+ L + + TT ++ L LH E +I + + + L+
Sbjct: 200 KMEASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLIC 259
Query: 237 YQPSVVAVSALWCSLDELTASSCAHVAFITRLFNQEQKDDVVRC-NMIMKSRLVDPLSNL 295
Y PS++A S+++ + L + + ++ + Q + D+ C + + LV P NL
Sbjct: 260 YVPSLIAASSIFLAKFILKPTENPWNSTLS-FYTQYKPSDLCNCAKGLHRLFLVGPGGNL 318
Query: 296 IVCGQPYS 303
+ YS
Sbjct: 319 RAVREKYS 326
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 62 EKELSYMPEPGYVEYL-DQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
E E+ P+ GY++ D +NN+ R + WL++V Y L + +LHL
Sbjct: 152 EMEVKCKPKIGYMKKQPDITNNM---RAILVDWLVEVGEEYKLQNETLHLAV-------- 200
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
Y+ LS ++LV A + +ASKF + P + E + D ++ + R
Sbjct: 201 --NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYNKKQVLR 257
Query: 181 MELTLLQSLGWRLGC------ITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARL 234
ME +L+ L + L +T Y + +SL +L ELT + +AD
Sbjct: 258 MEHLILKVLSFDLAAPTINQFLTQYFLHQQTNAKVESLSMYL-GELTLI-----DADP-Y 310
Query: 235 LKYQPSVVAVSALWCSLDELTASS 258
LKY PSV+A +A + +T +
Sbjct: 311 LKYLPSVIAAAAFHLASYTITGQT 334
>sp|Q10653|CCNB1_CAEEL G2/mitotic-specific cyclin-B1 OS=Caenorhabditis elegans GN=cyb-1
PE=1 SV=1
Length = 361
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 76 YLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHL-LFPTNRVDIKKSVYVTCVLSPAEW 134
+++ P R + WL++V + + L +LHL +F +R+ KK V S A+
Sbjct: 99 FMEGGEPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRMLQKK------VTSKAD- 151
Query: 135 KYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLG 194
++L+ ++ + +ASKF + P +H+ + + ++ I ME T+L SL + L
Sbjct: 152 ----LQLLGISAMFVASKFEEVYLPDIHDYEFIT-ENTYSKKQILAMEQTILNSLNFDLS 206
Query: 195 CITTYSYVELL 205
C ++ ++ L
Sbjct: 207 CPSSLVFLRCL 217
>sp|Q38819|CCA23_ARATH Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2
Length = 450
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
EL P P ++E + Q + R + WL++V Y L S +L+L +V
Sbjct: 200 ELKRRPLPDFMERI-QKDVTQSMRGILVDWLVEVSEEYTLASDTLYL-----------TV 247
Query: 124 Y-VTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRME 182
Y + L + ++L+ + C+ IASK+ + S+P + E D ++ + ME
Sbjct: 248 YLIDWFLHGNYVQRQQLQLLGITCMLIASKYEEISAPRIEEFCFIT-DNTYTRDQVLEME 306
Query: 183 LTLLQSLGWRLGCITTYSYVELLL--TNFDSLEFHLHNELTTLHINQ-TNADARLLKYQP 239
+L+ +++ T +++ L L L E ++ + T D LK+ P
Sbjct: 307 NQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTLIDYHFLKFLP 366
Query: 240 SVVAVSALWCS 250
SVVA SA++ +
Sbjct: 367 SVVAASAVFLA 377
>sp|Q5E9K7|CCNE2_BOVIN G1/S-specific cyclin-E2 OS=Bos taurus GN=CCNE2 PE=2 SV=1
Length = 404
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
L+KE Y+ + + E L S P R + WL++V Y L + +L
Sbjct: 118 LKKETRYVHDKHF-EVL-HSELEPQMRSILLDWLLEVCEVYTLHRETFYL---------A 166
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
+ + +L+ + M++L+ + L IASK + +P L E D + I R
Sbjct: 167 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVT-DGACSEEDILR 225
Query: 181 MELTLLQSLGWRLGCITTYSYVELLL 206
MEL +L++L W L +T S++ L L
Sbjct: 226 MELAILKALKWELCPVTVISWLNLFL 251
>sp|P39949|CCNE1_RAT G1/S-specific cyclin-E1 OS=Rattus norvegicus GN=Ccne1 PE=2 SV=2
Length = 411
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 54 EEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAI--QWLIKVPIPYVLISYSLHLL 111
EE I L KE +Y+ + E+ Q + L R RA+ WL++V Y L + +L
Sbjct: 115 EEVWRIMLNKEKTYLRD----EHFLQRHPLLQARMRAVLLDWLMEVCEVYKLHRETFYLA 170
Query: 112 --FPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEEL 169
F + ++++ T +++L+ ++ L IASK + P LH+
Sbjct: 171 QDFFDRYMASQQNIIKT-----------LLQLIGISALFIASKLEEIYPPKLHQFAY-VT 218
Query: 170 DYSFQSSTIRRMELTLLQSLGWRLGCITTYSYV-------------ELLLTNFDSLEFHL 216
D + I MEL ++++L WRL +T S++ E+L+ + F
Sbjct: 219 DGACSGDEILTMELMMMKALKWRLSPLTIVSWLNVYVQVAYVNDTGEVLMPQYPQQVFVQ 278
Query: 217 HNELTTLHINQTNADARLLKYQPSVVAVSALW 248
EL L + D L++ V+A SAL+
Sbjct: 279 IAELLDLCV----LDVGCLEFPYGVLAASALY 306
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
E Y P+ Y+ Q++ R I WL++V Y LI +L+L
Sbjct: 177 EAKYRPKSNYMR--KQTDINSSMRAILIDWLVEVSEEYKLIPQTLYL----------SVS 224
Query: 124 YVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMEL 183
Y+ LS ++LV AC+ +A+KF + P + E + D ++ + + RME
Sbjct: 225 YIDRFLSHMSVLRGKLQLVGAACMLVAAKFEEIYPPEVAEF-VYITDDTYTAKQVLRMEH 283
Query: 184 TLLQSLGWRLGCITTYSYVELLL----TNFDSLEFHLHNELTTLHINQTNADARLLKYQP 239
+L++L + L T ++ L +S +L L+ L + N D +KY P
Sbjct: 284 LILKTLAFDLSVPTCRDFLSRYLFAANAKPESQLKYLAEYLSELTL--INCDIS-VKYAP 340
Query: 240 SVVAVSAL 247
S++A S++
Sbjct: 341 SMIAASSI 348
>sp|Q61457|CCNE1_MOUSE G1/S-specific cyclin-E1 OS=Mus musculus GN=Ccne1 PE=1 SV=2
Length = 408
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 54 EEAAIICLEKELSYMPEPGYVEYLDQSNNLPHFRFRAI--QWLIKVPIPYVLISYSLHLL 111
EE I L KE +Y+ + E+ Q + L R RA+ WL++V Y L + +L
Sbjct: 112 EEVWRIMLNKEKTYLRD----EHFLQRHPLLQARMRAVLLDWLMEVCEVYKLHRETFYL- 166
Query: 112 FPTNRVDIKKSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDY 171
+ + + S +++L+ ++ L IASK + P LH+ D
Sbjct: 167 --------AQDFFDRYMASQHNIIKTLLQLIGISALFIASKLEEIYPPKLHQFAY-VTDG 217
Query: 172 SFQSSTIRRMELTLLQSLGWRLGCITTYSYV-------------ELLLTNFDSLEFHLHN 218
+ I MEL ++++L WRL +T S++ E+L+ + F
Sbjct: 218 ACSGDEILTMELMMMKALKWRLSPLTIVSWLNVYVQVAYVNDTGEVLMPQYPQQVFVQIA 277
Query: 219 ELTTLHINQTNADARLLKYQPSVVAVSALW 248
EL L + D L++ V+A SAL+
Sbjct: 278 ELLDLCV----LDVGCLEFPYGVLAASALY 303
>sp|Q75I54|CCA31_ORYSJ Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1
Length = 373
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
+E + P Y+E + Q + + R + WL++V Y L+S +L+L
Sbjct: 114 MEVQAKRRPAADYIETV-QVDVTANMRGILVDWLVEVAEEYKLVSDTLYLTVS------- 165
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
Y+ LS ++L+ V+ + IASK+ + S P++ + D ++ + +
Sbjct: 166 ---YIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDF-CYITDNTYMKQEVVK 221
Query: 181 MELTLLQSLGWRLGCITTYSYVELLL 206
ME +L L + +G TT +++ + +
Sbjct: 222 MERDILNVLKFEMGNPTTKTFLRMFI 247
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 61 LEKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIK 120
L+KE Y+ + + E L S+ P R + WL++V Y L + +L
Sbjct: 118 LKKESRYVHD-KHFEVL-HSDLEPQMRSILLDWLLEVCEVYTLHRETFYL---------A 166
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
+ + +L+ + M++L+ + L IASK + +P L E D + I R
Sbjct: 167 QDFFDRFMLTQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVT-DGACSEEDILR 225
Query: 181 MELTLLQSLGWRLGCITTYSYVELLL 206
MEL +L++L W L +T S++ L L
Sbjct: 226 MELIILKALKWELCPVTIISWLNLFL 251
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 62 EKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKK 121
E E+ P+ GY++ N R + WL++V Y L + +LHL
Sbjct: 186 EMEVKCKPKVGYMKKQPDITN--SMRAILVDWLVEVGEEYKLQNETLHLAV--------- 234
Query: 122 SVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRM 181
Y+ LS ++LV A + +ASKF + P + E + D ++ + RM
Sbjct: 235 -NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYTKKQVLRM 292
Query: 182 ELTLLQSLGWRLGCITTYSYVELLLTN-------FDSLEFHLHNELTTLHINQTNADARL 234
E +L+ L + L T ++ + +SL L EL+ + +AD
Sbjct: 293 EHLVLKVLAFDLAAPTINQFLTQYFLHQQPANCKVESLAMFL-GELSLI-----DADP-Y 345
Query: 235 LKYQPSVVAVSALWCSLDELTASS 258
LKY PSV+A +A +L +T S
Sbjct: 346 LKYLPSVIAAAAFHLALYTVTGQS 369
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 62 EKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKK 121
E E+ P+ GY++ N R + WL++V Y L + +LHL
Sbjct: 178 EMEVKCKPKVGYMKRQPDITN--SMRAILVDWLVEVGEEYKLQNETLHLAV--------- 226
Query: 122 SVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRM 181
Y+ LS ++LV A + +ASKF + P + E + D ++ + RM
Sbjct: 227 -NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVLRM 284
Query: 182 ELTLLQSLGWRLGCIT-----TYSYVELLLTN--FDSLEFHLHNELTTLHINQTNADARL 234
E +L+ L + L T T ++ L N +SL L EL+ + +AD
Sbjct: 285 EHLVLKVLAFDLAAPTVNQFLTQYFLHLQPANCKVESLAMFL-GELSLI-----DADP-Y 337
Query: 235 LKYQPSVVAVSALWCSLDELTASS 258
LKY PS++A +A +L +T S
Sbjct: 338 LKYLPSLIAGAAFHLALYTVTGQS 361
>sp|P07818|CCNB_ARBPU G2/mitotic-specific cyclin-B OS=Arbacia punctulata PE=2 SV=1
Length = 409
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 76 YLDQSNNLPHFRFRAI--QWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAE 133
YLD+ R R I WL++V + + L+ +L L + L+
Sbjct: 163 YLDRQETQITGRMRLILVDWLVQVHLRFHLLQETLFLTVQ----------LIDRFLAEHS 212
Query: 134 WKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRL 193
++LV V + IASK+ + P +++ + D ++ + IR+ME+ +L+ L ++L
Sbjct: 213 VSKGKLQLVGVTAMFIASKYEEMYPPEINDF-VYITDNAYTKAQIRQMEIAMLKGLKYKL 271
Query: 194 GCITTYSYVEL--LLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPSVVAVSALWCSL 251
G ++ D+ + L L + T + +++Y PS +A +A++ S+
Sbjct: 272 GKPLCLHFLRRNSKAAGVDAQKHTLAKYLMEI----TLPEYSMVQYSPSEIAAAAIYLSM 327
>sp|Q9C968|CCA24_ARATH Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1
Length = 461
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 64 ELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSV 123
EL P P ++E Q + R + WL++V Y L+ +L+L +V
Sbjct: 209 ELKRRPFPDFMEKT-QRDVTETMRGILVDWLVEVSEEYTLVPDTLYL-----------TV 256
Query: 124 Y-VTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRME 182
Y + L + ++L+ + C+ IASK+ + +P + E D ++ + ME
Sbjct: 257 YLIDWFLHGNYVERQRLQLLGITCMLIASKYEEIHAPRIEEFCFIT-DNTYTRDQVLEME 315
Query: 183 LTLLQSLGWRLGCITTYSYVELLL----TNF--DSLEFH-LHNELTTLHINQTNADARLL 235
+L+ +++ T+ +++ L +F SLE L N LT L T D L
Sbjct: 316 SQVLKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQSLEMEFLANYLTEL----TLMDYPFL 371
Query: 236 KYQPSVVAVSALWCSLDELTASS 258
K+ PS++A SA++ + L SS
Sbjct: 372 KFLPSIIAASAVFLAKWTLNQSS 394
>sp|P24871|CG24_YEAST G2/mitotic-specific cyclin-4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB4 PE=1 SV=2
Length = 460
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 62 EKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFP-TNRVDIK 120
E E+ Y P P Y++ +Q FR I WL+++ + L+ +L+L +R K
Sbjct: 217 ELEVKYRPNPYYMQ--NQVELTWPFRRTMIDWLVQLHFRFQLLPETLYLTINIVDRFLSK 274
Query: 121 KSVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRR 180
K+V + +LV V+ L IA+KF + + P+L ++ + L+ ++ I R
Sbjct: 275 KTVTLN-----------RFQLVGVSALFIAAKFEEINCPTLDDL-VYMLENTYTRDDIIR 322
Query: 181 MELTLLQSLGWRLGCITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPS 240
E ++ +L + +G ++ ++ D +F L + T + +L+ PS
Sbjct: 323 AEQYMIDTLEFEIGWPGPMPFLR-RISKADDYDFEPRT-LAKYLLETTIVEPKLVAAAPS 380
Query: 241 VVAVSALWCSLDELTAS--SCAHVAF 264
+A A + S L ++ S HV +
Sbjct: 381 WLAAGAYFLSRTILGSNDWSLKHVFY 406
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 62 EKELSYMPEPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKK 121
E E+ P+ GY++ N R + WL++V Y L + +LHL
Sbjct: 177 EMEIKCKPKVGYMKKQPDITN--SMRAILVDWLVEVGEEYKLQNETLHLAV--------- 225
Query: 122 SVYVTCVLSPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRM 181
Y+ LS ++LV A + +ASKF + P + E + D ++ + RM
Sbjct: 226 -NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVLRM 283
Query: 182 ELTLLQSLGWRLGCITTYSYVELLLTN-------FDSLEFHLHNELTTLHINQTNADARL 234
E +L+ L + L T ++ + +SL L EL+ + +AD
Sbjct: 284 EHLVLKVLAFDLAAPTVNQFLNQYFLHQQPANCKVESLAMFL-GELSLI-----DADP-Y 336
Query: 235 LKYQPSVVAVSALWCSLDELTASS 258
LKY PS++A +A +L +T S
Sbjct: 337 LKYLPSLIAGAAFHLALYTVTGQS 360
>sp|Q9IBG1|CCNB1_ORYLA G2/mitotic-specific cyclin-B1 OS=Oryzias latipes GN=ccnb1 PE=2 SV=1
Length = 404
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 70 EPGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVL 129
+P Y+E + + N+ R I WL++V + + L+ ++++ V I + L
Sbjct: 161 KPNYLEGQEITGNM---RAILIDWLVQVGLKFRLLQETMYMT-----VGI-----IDRFL 207
Query: 130 SPAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSL 189
++LV V + +ASK+ + P + + D ++ ++ IR ME+T+L+ L
Sbjct: 208 QDHPVPKKQLQLVGVTAMFLASKYEEMYPPEISDFAYVT-DRAYTTAQIRDMEMTILRVL 266
Query: 190 GWRLGCITTYSYVELLLTNFD-SLEFHLHNELTTLHINQTNADARLLKYQPSVVAVSALW 248
++LG ++ ++ + E H L + + D + + PS+VA +AL
Sbjct: 267 KFQLGRPLPLQFLRRASKIYEVTAEQH---TLAKYLLELSMVDYDMAHFSPSLVASAALA 323
Query: 249 CSLDELTAS 257
+L L A
Sbjct: 324 LTLKVLDAG 332
>sp|Q9Z238|CCNE2_MOUSE G1/S-specific cyclin-E2 OS=Mus musculus GN=Ccne2 PE=2 SV=1
Length = 404
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 84 PHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLSPAEWKYWMVELVS 143
P R + WL++V Y L + +L + + +L+ + M++L+
Sbjct: 139 PQMRSILLDWLLEVCEVYTLHRETFYL---------AQDFFDRFMLTQKDVNKNMLQLIG 189
Query: 144 VACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLGWRLGCITTYSYVE 203
+ L IASK + +P L E D + I +MEL +L++L W L +T S++
Sbjct: 190 ITSLFIASKLEEIYAPKLQEFAYVT-DGACSEVDILKMELNILKALKWELCPVTVISWLN 248
Query: 204 LLL 206
L L
Sbjct: 249 LFL 251
>sp|Q60FY0|CCNB1_ANGJA G2/mitotic-specific cyclin-B1 OS=Anguilla japonica GN=ccnb1 PE=2
SV=1
Length = 403
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 71 PGYVEYLDQSNNLPHFRFRAIQWLIKVPIPYVLISYSLHLLFPTNRVDIKKSVYVTCVLS 130
P Y+E + + N+ R I WL++V + + L+ ++++ V I + L
Sbjct: 161 PKYLEGQEVTGNM---RAILIDWLVQVQVKFRLLQETMYMT-----VGI-----IDRFLQ 207
Query: 131 PAEWKYWMVELVSVACLSIASKFNDTSSPSLHEIQMEELDYSFQSSTIRRMELTLLQSLG 190
++LV V + +ASK+ + P + + D ++ ++ IR ME+ +L+ L
Sbjct: 208 DNPVPKKQLQLVGVTAMFLASKYEEMYPPEIADFAFVT-DRAYTTAQIRDMEMKILRVLN 266
Query: 191 WRLGCITTYSYVELLLTNFDSLEFHLHNELTTLHINQTNADARLLKYQPSVVAVSALWCS 250
+ G ++ + + H+ L + T D ++ + PS+VA +A S
Sbjct: 267 FSFGRPLPLQFLR-RASKIGEVTAE-HHTLAKYFMELTMVDYEMVHFPPSLVASAAFALS 324
Query: 251 L 251
L
Sbjct: 325 L 325
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,445,923
Number of Sequences: 539616
Number of extensions: 5220151
Number of successful extensions: 10129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 10024
Number of HSP's gapped (non-prelim): 165
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)