Query 048739
Match_columns 491
No_of_seqs 114 out of 214
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 12:36:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048739.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048739hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04922 DIE2_ALG10: DIE2/ALG1 100.0 6E-127 1E-131 992.0 34.8 377 22-463 1-379 (379)
2 KOG2642 Alpha-1,2 glucosyltran 100.0 2E-115 4E-120 872.6 26.0 418 6-491 10-428 (446)
3 PF13231 PMT_2: Dolichyl-phosp 97.1 0.022 4.9E-07 51.0 14.6 97 88-187 20-123 (159)
4 TIGR03766 conserved hypothetic 96.9 0.036 7.7E-07 60.6 17.2 162 19-196 81-253 (483)
5 TIGR03663 conserved hypothetic 96.7 0.14 3E-06 55.5 19.4 151 19-189 15-173 (439)
6 PF02366 PMT: Dolichyl-phospha 95.9 0.43 9.3E-06 46.9 16.6 144 26-183 19-186 (245)
7 PF03901 Glyco_transf_22: Alg9 86.4 38 0.00082 36.1 17.1 161 17-189 8-190 (418)
8 COG1807 ArnT 4-amino-4-deoxy-L 86.1 11 0.00025 41.3 13.3 139 29-185 38-184 (535)
9 PRK13279 arnT 4-amino-4-deoxy- 83.3 44 0.00095 37.6 16.2 119 19-155 19-145 (552)
10 COG1287 Uncharacterized membra 82.3 34 0.00075 39.9 15.5 121 8-146 25-165 (773)
11 PF09594 DUF2029: Protein of u 81.1 17 0.00037 34.8 10.8 61 128-189 60-120 (241)
12 PLN02816 mannosyltransferase 80.5 53 0.0012 36.9 15.6 162 13-188 43-224 (546)
13 PF04188 Mannosyl_trans2: Mann 75.3 73 0.0016 34.7 14.5 69 124-193 145-213 (443)
14 PF14897 EpsG: EpsG family 67.0 1.4E+02 0.0031 29.8 14.9 131 27-188 20-157 (330)
15 COG5542 Predicted integral mem 66.6 21 0.00046 38.5 7.8 93 98-192 125-218 (420)
16 PF09913 DUF2142: Predicted me 61.5 1.5E+02 0.0032 31.1 13.1 114 56-187 95-219 (389)
17 PF09852 DUF2079: Predicted me 55.9 2.1E+02 0.0045 31.0 13.3 114 58-189 44-158 (449)
18 COG4745 Predicted membrane-bou 54.5 3.5E+02 0.0075 30.2 18.5 160 17-196 27-194 (556)
19 PF02516 STT3: Oligosaccharyl 47.4 57 0.0012 35.1 7.4 118 30-159 32-163 (483)
20 KOG2161 Glucosidase I [Carbohy 33.6 16 0.00036 42.0 0.6 19 29-55 441-459 (849)
21 PF15513 DUF4651: Domain of un 26.3 21 0.00046 28.6 -0.1 10 382-391 41-50 (62)
22 PF03669 UPF0139: Uncharacteri 20.0 1.6E+02 0.0035 25.8 4.2 29 165-193 36-64 (103)
No 1
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=100.00 E-value=6.2e-127 Score=992.03 Aligned_cols=377 Identities=45% Similarity=0.804 Sum_probs=312.3
Q ss_pred hhcCCCCccccccChHHHHHhhhcCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchh-HHhhhhhHHH
Q 048739 22 NRVVPEPYMDEIFHVPQAQQYCKGNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTA-VLRSTNGVLA 100 (491)
Q Consensus 22 n~~vpePYmDEiFHipQaQ~YC~g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~-~LR~~N~~~~ 100 (491)
|++||||||||+|||||||+||+|||+|||||||||||||++|++.+ .|+.+ + ..|+.. .||++|++++
T Consensus 1 ~~~vp~PYmDEiFHipQaq~YC~g~f~~WDpKITTpPGLYlls~~~l---~~~~~------~-~~~~~~~~LR~~N~l~~ 70 (379)
T PF04922_consen 1 NHIVPEPYMDEIFHIPQAQAYCRGRFTEWDPKITTPPGLYLLSVAAL---FPGSW------F-FGCSSLSVLRSTNLLFA 70 (379)
T ss_pred CCCCCCCcccchhhhHHHHHHHhchhhhhCCccCCCchHHHHHHHHH---hhHHH------h-hcccchHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999998843 23221 1 245554 4999999998
Q ss_pred H-HHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhh
Q 048739 101 V-LCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLKKKYLFSALLGAFAVLIR 179 (491)
Q Consensus 101 ~-~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~~~~~~sal~G~~sl~fR 179 (491)
+ +++++++++++..+++.+ +++.++|+|+++||++||||||||||++||++||+||..+++|+++.||++|++|++||
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~-~~~~~~a~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~sal~g~~sv~fR 149 (379)
T PF04922_consen 71 LVVLPWLIYRILRFLNPRRS-RKAILSALNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLSALFGLLSVLFR 149 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Confidence 7 788888888877665544 77889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccccccccCCCCCCcccccccccCccccc
Q 048739 180 QTNIIWMIFVACIGVINITLAHRRIGAEVNENHVSERKNDFLTSTSSISVGSNLRKRKSGKAVDKDDISIRSTSSFSATQ 259 (491)
Q Consensus 180 QTNIvWvaf~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (491)
||||||++|+++....+.++ ..+++ . +++ ..++
T Consensus 150 QTNIvWv~f~~~~~~~~~~~---~~~~~------~-----~~~---------------------------------~~~~ 182 (379)
T PF04922_consen 150 QTNIVWVAFFAGGALARQLD---RSRPQ------G-----KQS---------------------------------KFND 182 (379)
T ss_pred cchHHHHHHHHHHHHHHHHH---Hhcch------h-----hcc---------------------------------cchH
Confidence 99999999997763322111 00000 0 000 0000
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHhhhhHHHHHHHHhhhhhccCcEEeccCCccccccchhhHHHHHHHHHhhhcccccc
Q 048739 260 TSGLLGEIQDIILTSWHMKWGILVSFCPFLLALLAFIAFIHWNGSVVLGAKEAHAVSPHFAQIMYVSLFSVLLSPPLHIT 339 (491)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~vl~~~~Pyi~vl~~F~~FV~wNGgIVLGDKsnH~a~~Hl~QllYf~~F~~~f~~P~~l~ 339 (491)
...+..+.......+...+...+|||++++++|++||+|||||||||||||+|++|+|||+||++|+++|++|.+++
T Consensus 183 ---~~~~~~~~~~~~~~~l~~~~~~~~Py~~v~~~F~~FV~~NGgIVlGDKsnH~a~~H~~Ql~Yf~~f~~~fs~P~~l~ 259 (379)
T PF04922_consen 183 ---VLRTFLSFLKLFISSLPDISLLLLPYILVLAAFAAFVYWNGGIVLGDKSNHVATLHLPQLFYFWLFFAFFSWPLLLS 259 (379)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheEcCeEEECccccCCccccHHHHHHHHHHHHHHHhHHHHh
Confidence 01111111112222344455667899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcCchhHHHHHHHHHHHHhhhhccccccceeccCCccchhhHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 048739 340 FGQVATLLQSFWKNRPLSFFQWLFALTVGLLTVHFFSIAHPYLLADNRHYPFYLWRKVIKAHWSMKFLLVPLYVYSWFSI 419 (491)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~fTivHPflLADNRHYtFYiwRr~~~r~~~~kYllvP~Y~~~~~~v 419 (491)
+.+++++.+..+|++.+..+ .+..++.+|++||++|||+||||||||||||||+++||++.||+++|+|++|+|.+
T Consensus 260 ~~~l~~~~~~~~~~~~~~~~----~~~~~~~~v~~fT~vHPflLADNRHY~FYiwrr~~~~~~~~ky~l~P~Y~~~~~~~ 335 (379)
T PF04922_consen 260 PSQLSRFFRFLRRNPILTSL----LILAIMLIVVHFTIVHPFLLADNRHYTFYIWRRIIRRHPWVKYLLVPVYIFSGWAI 335 (379)
T ss_pred HHHHHHHHHHHHhhhHHHHH----HHHHHHHHHHHhhccCceeccccceeehHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99888888888777654322 22233345677799999999999999999999999999999999999999999999
Q ss_pred HHHhccCCchHHHHHHHHHHHHHhcCCCCCCCCcccHHHHHHHh
Q 048739 420 FGILGRTQRKIWVLVYFLATAATLVPAPLIEFRYYTIPFYFLIL 463 (491)
Q Consensus 420 ~~~l~~~~~~~~~l~~~~at~lsLvpapLvEpRYFiiP~v~~RL 463 (491)
++.+++.++.+|.++|.+|++++||||||+||||||+||++|||
T Consensus 336 ~~~l~~~~~~~~~l~~~~~~~l~lvp~pL~E~RYfiiP~~~~rl 379 (379)
T PF04922_consen 336 WRSLASRRSVLWVLLFVLATALTLVPSPLVEPRYFIIPYVLWRL 379 (379)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHcCccccchhHHHHHHHHHhC
Confidence 99999778899999999999999999999999999999999997
No 2
>KOG2642 consensus Alpha-1,2 glucosyltransferase/transcriptional activator [Posttranslational modification, protein turnover, chaperones; Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-115 Score=872.57 Aligned_cols=418 Identities=36% Similarity=0.635 Sum_probs=348.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCccccccChHHHHHhhhcCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccc
Q 048739 6 VAVIVSFWVIPISILVNRVVPEPYMDEIFHVPQAQQYCKGNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFD 85 (491)
Q Consensus 6 ~~~~~~~~~~~i~~~Vn~~vpePYmDEiFHipQaQ~YC~g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~ 85 (491)
..++.....+.....+.++|||||||||||++|||+||+|||+ ||||||||||||++|+.-. .| .+
T Consensus 10 ~lll~iff~~t~ll~~~~yvpepymDEiFHi~Qtq~yc~g~ws-WdP~ITTpPglYlvsv~~~---sp----------~~ 75 (446)
T KOG2642|consen 10 FLLLAIFFCITVLLAVYHYVPEPYMDEIFHITQTQRYCSGNWS-WDPLITTPPGLYLVSVPAC---SP----------NE 75 (446)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhhhhHhhhHHHHHHhcCCCC-CCcccCCCCeeEEEeeccc---cc----------cc
Confidence 3445555566666789999999999999999999999999999 9999999999999997421 11 25
Q ss_pred cCchhHHhhhhhHHH-HHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhhhh
Q 048739 86 VCSTAVLRSTNGVLA-VLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLKKK 164 (491)
Q Consensus 86 ~Cs~~~LR~~N~~~~-~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~~~ 164 (491)
.||...||.+|+++. +..++++-+...-++++.++....+++.+++.+|+++|||+|||||+|||++||++|..++.|+
T Consensus 76 ~~Si~~lrlinll~g~i~lp~li~~~v~llnna~g~~~~~f~~~tl~slP~l~~fsfLfYTD~~St~~vllay~f~~~~n 155 (446)
T KOG2642|consen 76 RCSILLLRLINLLCGRIFLPVLIPTLVILLNNADGQQDVWFTASTLGSLPILIFFSFLFYTDLGSTFFVLLAYLFCLYGN 155 (446)
T ss_pred cchhHHHHHHHHHhccEeEEeeeccchhhhcccccceeEEeehhHHhhccHHHHHHHHHHHhHHHHHHHHHHHhcccccC
Confidence 699999999999874 3345555444333333334444568899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccccccccCCCCCC
Q 048739 165 YLFSALLGAFAVLIRQTNIIWMIFVACIGVINITLAHRRIGAEVNENHVSERKNDFLTSTSSISVGSNLRKRKSGKAVDK 244 (491)
Q Consensus 165 ~~~sal~G~~sl~fRQTNIvWvaf~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (491)
++.||.+|++|++||||||+|.+|+|+.......+ +..+| + .
T Consensus 156 ~~~SAfl~~~s~lfRQTNIIWa~fia~~viAs~~~---~~~~k------~-----------------------~------ 197 (446)
T KOG2642|consen 156 HKTSAFLGFCSFLFRQTNIIWAVFIAGNVIASKLT---EAWKK------E-----------------------L------ 197 (446)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhhh---HHHhH------H-----------------------h------
Confidence 99999999999999999999999998764443111 00000 0 0
Q ss_pred cccccccccCcccccccchHHHHHHHHHHhhhhhhhhHHhhhhHHHHHHHHhhhhhccCcEEeccCCccccccchhhHHH
Q 048739 245 DDISIRSTSSFSATQTSGLLGEIQDIILTSWHMKWGILVSFCPFLLALLAFIAFIHWNGSVVLGAKEAHAVSPHFAQIMY 324 (491)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vl~~~~Pyi~vl~~F~~FV~wNGgIVLGDKsnH~a~~Hl~QllY 324 (491)
+ .+ ...+..+ +++++.+..+|..+.....|||+...++|.+|+.||||||+||||+|+|++|++|++|
T Consensus 198 ----n----~~---tfa~~l~-i~~fl~a~lknls~l~~~~wPyi~~~~lF~~fl~wn~sIvLGDkssHqa~lH~~QifY 265 (446)
T KOG2642|consen 198 ----N----KG---TFAEFLK-ILQFLLAYLKNLSMLALLTWPYILLGFLFCAFLVWNGSIVLGDKSSHQACLHFPQIFY 265 (446)
T ss_pred ----c----cc---cHHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHhheeeEecCeEEEcccccccccccHHHHHH
Confidence 0 00 1112222 4555555566666666677899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccchhHHHHHHHHHHhcCchhHHHHHHHHHHHHhhhhccccccceeccCCccchhhHHHHHHhhhhhH
Q 048739 325 VSLFSVLLSPPLHITFGQVATLLQSFWKNRPLSFFQWLFALTVGLLTVHFFSIAHPYLLADNRHYPFYLWRKVIKAHWSM 404 (491)
Q Consensus 325 f~~F~~~f~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~fTivHPflLADNRHYtFYiwRr~~~r~~~~ 404 (491)
|..|+++|++|.++|+++.+++.+..+|++...++. ..+..++++|+||++|||+||||||||||+|||+++|.+++
T Consensus 266 ~f~F~~~fS~p~l~s~s~ik~llslv~k~k~~~~~v---~~~~v~li~~f~T~~HpyLLADNRHytFYv~rRl~~r~~~l 342 (446)
T KOG2642|consen 266 FFSFTLFFSFPHLLSPSKIKTLLSLVWKRKILFLVV---TLVSVFLIWKFYTYAHPYLLADNRHYTFYVWRRLFQRYPTL 342 (446)
T ss_pred HHHHHHHHhhHhhcChhHHHHHHHHHHHcchHHHHH---HHHHHHHHHHhhhccCceEeecCceeeehHHHHHHhhhHHH
Confidence 999999999999999999999999888888754432 33444566799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHhcCCCCCCCCcccHHHHHHHhhccCCCcHHHHHHHHHHHHHH
Q 048739 405 KFLLVPLYVYSWFSIFGILGRTQRKIWVLVYFLATAATLVPAPLIEFRYYTIPFYFLILHSDNTDNRHWLLMGVLHMSLN 484 (491)
Q Consensus 405 kYllvP~Y~~~~~~v~~~l~~~~~~~~~l~~~~at~lsLvpapLvEpRYFiiP~v~~RL~~~~~~~~~~~le~~~~~~IN 484 (491)
||+++|.|++++|.+.+++. ++.+.+.+.|.++...++|||||+||||||+||++||++.|.++++|+.+|..||+.+|
T Consensus 343 ky~l~p~Y~fs~~f~lds~~-s~~ift~l~f~ili~~viVPapLfE~RYfIlPyvfwRl~iplp~tsrl~mefl~~m~~n 421 (446)
T KOG2642|consen 343 KYLLVPAYIFSGWFMLDSLK-SKHIFTNLMFFILIFTVIVPAPLFEFRYFILPYVFWRLNIPLPPTSRLSMEFLCYMVVN 421 (446)
T ss_pred HHHhhHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHhcchhhcchhhhHHHHHHHhhcCCCCCcchHHHHHHHHHHHH
Confidence 99999999999999999986 66778999999999999999999999999999999999999988999999999999999
Q ss_pred HhhhccC
Q 048739 485 IFTLMMF 491 (491)
Q Consensus 485 ~~T~yvF 491 (491)
++|.|+|
T Consensus 422 vitl~if 428 (446)
T KOG2642|consen 422 VITLYIF 428 (446)
T ss_pred HHHHHHH
Confidence 9999986
No 3
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.08 E-value=0.022 Score=51.01 Aligned_cols=97 Identities=28% Similarity=0.336 Sum_probs=78.5
Q ss_pred chhHHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhh----h
Q 048739 88 STAVLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLK----K 163 (491)
Q Consensus 88 s~~~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~----~ 163 (491)
+...+|..|.+...+..+..+++.|+..+ ++.+...++..++.|....++....+|...+.+.+.+.+...+ +
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~y~i~r~~~~---~~~a~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (159)
T PF13231_consen 20 SVWALRLFNILFSLLTLLLIYLIARRLFG---RRAALIAALLLALSPMFIFYSASARPDMLLLFFFLLALYAFYRYIKSK 96 (159)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCC---chHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 67899999999999999999999887633 3456677888899999999999999999999888777766543 1
Q ss_pred ---hhHHHHHHHHHHHhhhhhhhhHHH
Q 048739 164 ---KYLFSALLGAFAVLIRQTNIIWMI 187 (491)
Q Consensus 164 ---~~~~sal~G~~sl~fRQTNIvWva 187 (491)
...+++++..++.+.|.++++=..
T Consensus 97 ~~~~~~~~~l~~~l~~~~k~~~~~~~~ 123 (159)
T PF13231_consen 97 KWRWWILAGLLLGLAFLTKYTFLLLIP 123 (159)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 125788889999999999865444
No 4
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=96.93 E-value=0.036 Score=60.58 Aligned_cols=162 Identities=24% Similarity=0.225 Sum_probs=102.1
Q ss_pred HHhhhcCCCCccccccChHHHHHhhhcCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhhH
Q 048739 19 ILVNRVVPEPYMDEIFHVPQAQQYCKGNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNGV 98 (491)
Q Consensus 19 ~~Vn~~vpePYmDEiFHipQaQ~YC~g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~~ 98 (491)
..+-..-+.|+-|=-.=..||. +|+..+++.-...-| +=++....-... .+ .+ +..+.......|++
T Consensus 81 ~~i~~~~~~p~~D~~~v~~~A~---~~~~~~~~~Y~~~yP--nn~g~~l~~~~l-----~k--if-g~~~~~~~~llNil 147 (483)
T TIGR03766 81 ILVTALHPLIGWDAGAVHTAAT---KSNESSISNYFSRNP--NNLFLLLFMHFL-----YK--LF-GETSWLFFDVVNIV 147 (483)
T ss_pred HHHHHcCCCcCcCHHHHHHHHh---cCCCcccCceeeECC--chHHHHHHHHHH-----HH--Hh-CccHHHHHHHHHHH
Confidence 3455557778888643335666 466665666666655 223322211100 00 11 22345566999999
Q ss_pred HHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHH---Hhh-h---h----hHH
Q 048739 99 LAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLA---CLK-K---K----YLF 167 (491)
Q Consensus 99 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~---~l~-~---~----~~~ 167 (491)
...+...+.+.+.+++-.+ +.+...++.-+++|+.+++..-+|||.+++.++.++.+. ..+ + + ..+
T Consensus 148 ~~~~si~liy~i~k~lf~~---~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~~~~~~~~~~~~~~~~~~Il 224 (483)
T TIGR03766 148 LVDLSALILYKAVKKVFNK---KKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFLYTVISKKTDLRKKIALSIL 224 (483)
T ss_pred HHHHHHHHHHHHHHHHhCc---hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 8877778888887776542 334445556688899999999999999999887666332 112 1 1 146
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Q 048739 168 SALLGAFAVLIRQTNIIWMIFVACIGVIN 196 (491)
Q Consensus 168 sal~G~~sl~fRQTNIvWvaf~a~~~~l~ 196 (491)
++++-.++.++|+++|+-+.......+++
T Consensus 225 ~gillal~~~iKp~~iI~liA~~i~~~l~ 253 (483)
T TIGR03766 225 LGVLLAIAYFIKPSAIIFVIAIFIVLFLQ 253 (483)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 77777789999999999987554444444
No 5
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=96.71 E-value=0.14 Score=55.55 Aligned_cols=151 Identities=21% Similarity=0.222 Sum_probs=103.1
Q ss_pred HHhhhcCCCCccccccChHHHHHhhh-cCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhh
Q 048739 19 ILVNRVVPEPYMDEIFHVPQAQQYCK-GNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNG 97 (491)
Q Consensus 19 ~~Vn~~vpePYmDEiFHipQaQ~YC~-g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~ 97 (491)
+..+--.|.=--||..|-..+.++-+ |+|. +||. .-||.+|.+..+... + | .-+....|...+
T Consensus 15 Rl~~Lg~~~~~~DEa~ya~~a~~ml~~g~~~-~~p~-~h~Pll~wl~A~~~~-l-----------F--G~se~a~RL~~a 78 (439)
T TIGR03663 15 RLFELGLRVFHHDEAIHASFILKLLETGVYS-YDPA-YHGPFLYHITAAVFH-L-----------F--GISDATARLLPA 78 (439)
T ss_pred HHHhcCCCCCCCCchhHHHHHHHHHhcCCCC-cCCC-CCCCHHHHHHHHHHH-H-----------h--CCCHHHHHHHHH
Confidence 44443344445699999999999886 6775 5774 568999987644321 1 1 234578999999
Q ss_pred HHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhh----h---hhHHHHH
Q 048739 98 VLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLK----K---KYLFSAL 170 (491)
Q Consensus 98 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~----~---~~~~sal 170 (491)
++..+++.+ +.+.++.- +++.+...|+.+++-|....+|-+.=+|+..+++.+++.....+ + ...++++
T Consensus 79 L~g~~v~l~-~~~~r~~~---~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~ 154 (439)
T TIGR03663 79 VFGVLLPLT-AWLYRKRL---GDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAAS 154 (439)
T ss_pred HHHHHHHHH-HHHHHHHc---CcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 887554443 33333321 23456678888999999999999999999999888776655332 1 1256777
Q ss_pred HHHHHHhhhhhhhhHHHHH
Q 048739 171 LGAFAVLIRQTNIIWMIFV 189 (491)
Q Consensus 171 ~G~~sl~fRQTNIvWvaf~ 189 (491)
...++++...+-.+-.+.+
T Consensus 155 ~~gLa~ltKg~~~l~~~~~ 173 (439)
T TIGR03663 155 ALALAFTSKENAYLIILIF 173 (439)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7788899999877655433
No 6
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=95.94 E-value=0.43 Score=46.90 Aligned_cols=144 Identities=22% Similarity=0.211 Sum_probs=96.3
Q ss_pred CCCccccccChHHHHHhhhcCCCcc------------CCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHh
Q 048739 26 PEPYMDEIFHVPQAQQYCKGNFKSW------------DPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLR 93 (491)
Q Consensus 26 pePYmDEiFHipQaQ~YC~g~f~~W------------DpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR 93 (491)
++-.-||.-+-.-+++|.++.+..- +.+....||+|-.....- ....+..+...+|
T Consensus 19 ~~~v~de~~~~~~~~~Y~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~~~~------------~~~~~~~~~~~~R 86 (245)
T PF02366_consen 19 NDGVFDEVHFDEFANRYAEHTRFMDEHPPLGKLLFALGAYLFGYPPLYYWISAIG------------FYYFGSVNYWAAR 86 (245)
T ss_pred hhhhhccccccHHHHHHHhcceeeccCCcccchhhhhhhHHhcccchhhHHHhhh------------hhhhhhHHHHHHH
Confidence 3446788888888999999875421 001112333322221100 0011236678999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhhh----------
Q 048739 94 STNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLKK---------- 163 (491)
Q Consensus 94 ~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~~---------- 163 (491)
..|+++..++..+++.+.+++.. +...+...++.+++-|.++..|-..-+|..-+++++++.....+-
T Consensus 87 ~~~~l~~~~~~~l~y~~~~~~~~--s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~ 164 (245)
T PF02366_consen 87 LPSALFGALTVPLVYLILRRLFG--SRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLRWYRYQPFRRKW 164 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC--ChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999998888888888877643 234566778889999999999999999999998887766543322
Q ss_pred --hhHHHHHHHHHHHhhhhhhh
Q 048739 164 --KYLFSALLGAFAVLIRQTNI 183 (491)
Q Consensus 164 --~~~~sal~G~~sl~fRQTNI 183 (491)
...++++...+|+..+.+=.
T Consensus 165 ~~~~~l~gi~lGla~~~K~~~~ 186 (245)
T PF02366_consen 165 WLWLLLAGIALGLAILTKGPGL 186 (245)
T ss_pred HHHHHHHHHHHHHHHHhchhHH
Confidence 12566777778899986654
No 7
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=86.44 E-value=38 Score=36.08 Aligned_cols=161 Identities=19% Similarity=0.190 Sum_probs=92.1
Q ss_pred HHHHhhhcCCCCc--cccccChHHHHHhhhcCCC----cc--CCCCCCCChhHHHHHHH--Hhhhccccccccccccccc
Q 048739 17 ISILVNRVVPEPY--MDEIFHVPQAQQYCKGNFK----SW--DPMITTPPGLYYLSLAY--VASLFPGMLTVKAVSFFDV 86 (491)
Q Consensus 17 i~~~Vn~~vpePY--mDEiFHipQaQ~YC~g~f~----~W--DpKITTpPGLYlls~~~--~a~~~~~~~~~~~~~~~~~ 86 (491)
..+..+...+..+ =||.|-..+--++--+... || ++.|...=...+.+..+ .+.+. .....
T Consensus 8 ~~R~~~a~~~~~~f~pDE~fq~~E~ah~~~~g~g~~tWE~~~~~~iRS~~~p~i~~~~~~~~~~~~---------~~~~~ 78 (418)
T PF03901_consen 8 AFRLLNALFPQTSFHPDEYFQSLEPAHRLVFGYGYLTWEWSPFPGIRSWLFPLIFAIPYKLLARLG---------LDSPW 78 (418)
T ss_pred HHHHHHHHhccCCCCCCcccccHHhhhhhhcCccchhhhhccCCCCCChHHHHHHHHHHHHHHHHh---------hccch
Confidence 3445555555333 5898866444344443322 78 66665443333333222 11100 00122
Q ss_pred CchhHHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhh----
Q 048739 87 CSTAVLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLK---- 162 (491)
Q Consensus 87 Cs~~~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~---- 162 (491)
......|..-.+.+..+-..+++..++... ++-+....+..++-+-.++++-=.+.+..++.+++.+.....+
T Consensus 79 ~~~~~~Rl~~~~~s~~~d~~~~~~~~~~~~---~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~ 155 (418)
T PF03901_consen 79 AVFYAPRLVLALLSALSDYYLYRLVKRLFG---SSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSR 155 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhcc
Confidence 335677887766665555566665444322 1112223334456667778888888999999888887777664
Q ss_pred --------hhhHHHHHHHHHHHhhhhhhhhHHHHH
Q 048739 163 --------KKYLFSALLGAFAVLIRQTNIIWMIFV 189 (491)
Q Consensus 163 --------~~~~~sal~G~~sl~fRQTNIvWvaf~ 189 (491)
++....++++.+++++|-|+++=.+..
T Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl 190 (418)
T PF03901_consen 156 SNSSSSSKRYLLAIGLLAGLAVFFRPTSALFWLPL 190 (418)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334677888999999998887644443
No 8
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=86.07 E-value=11 Score=41.35 Aligned_cols=139 Identities=19% Similarity=0.208 Sum_probs=91.2
Q ss_pred ccccccChHHHHHhhhcCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhhHHHHHHHHHHH
Q 048739 29 YMDEIFHVPQAQQYCKGNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNGVLAVLCSIILY 108 (491)
Q Consensus 29 YmDEiFHipQaQ~YC~g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~~~~~~~~~l~~ 108 (491)
|-|..-.+-|...+-.+++. ..+..--||..|+++.+... + ..-+....|..+.+...+..++++
T Consensus 38 ~~~~~~~m~~s~~w~~~~~~-g~~~~~kPPl~~Wl~a~~~~-l-------------fG~~~~~~rl~~~l~~~~~~~l~y 102 (535)
T COG1807 38 YAEIAREMLESGDWFTPQLL-GLPYFEKPPLVYWLQALSYL-L-------------FGVNEWSARLPSALAGALTALLVY 102 (535)
T ss_pred HHHHHHHHHHcCCCcceeeC-CccccCCCcHHHHHHHHHHH-H-------------cCcchHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555554 45777889999999875421 1 113457888888887777777888
Q ss_pred HHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHH---hhh--h-h--HHHHHHHHHHHhhhh
Q 048739 109 EIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLAC---LKK--K-Y--LFSALLGAFAVLIRQ 180 (491)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~---l~~--~-~--~~sal~G~~sl~fRQ 180 (491)
.+-+++..+ +.+...++.++++|..+-.+.++=+|..-++++.++.... .++ + . +...+.-.++++.+.
T Consensus 103 ~l~k~l~~~---~~a~~aali~~~~p~~~~~~~~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg 179 (535)
T COG1807 103 WLAKRLFGR---LAALLAALILLLTPLFFLIGRLALLDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKG 179 (535)
T ss_pred HHHHHHhcc---HHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhc
Confidence 887766543 5677888999999999999999999999887766554432 222 1 1 333444445566666
Q ss_pred hhhhH
Q 048739 181 TNIIW 185 (491)
Q Consensus 181 TNIvW 185 (491)
+=++=
T Consensus 180 ~~~~~ 184 (535)
T COG1807 180 PGALL 184 (535)
T ss_pred hHHHH
Confidence 54433
No 9
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=83.25 E-value=44 Score=37.60 Aligned_cols=119 Identities=18% Similarity=0.102 Sum_probs=80.8
Q ss_pred HHhhhcCCCC-ccccccChHHHHHhhh-cCCCccCCCC------CCCChhHHHHHHHHhhhcccccccccccccccCchh
Q 048739 19 ILVNRVVPEP-YMDEIFHVPQAQQYCK-GNFKSWDPMI------TTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTA 90 (491)
Q Consensus 19 ~~Vn~~vpeP-YmDEiFHipQaQ~YC~-g~f~~WDpKI------TTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~ 90 (491)
..++-.-+++ --||..+...|++--+ |||- .|.+ .-||..|++..+... ++ .-+..
T Consensus 19 yll~L~~r~lw~~DE~ryA~iareMl~sGdWl--vP~~~g~~y~eKPPL~yWl~Als~~-LF-------------G~~~~ 82 (552)
T PRK13279 19 YLLPLNTRLLWQPDETRYAEISREMLASGDWI--VPHFLGLRYFEKPIAGYWINSIGQW-LF-------------GDNNF 82 (552)
T ss_pred HHHHhcCCCCCCCchHHHHHHHHHHHHhCCcC--ccccCCCcCCCCCcHHHHHHHHHHH-Hc-------------CCCcH
Confidence 4444344555 3499999999999776 4553 2333 679999998755321 11 12447
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHH
Q 048739 91 VLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLA 155 (491)
Q Consensus 91 ~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~ 155 (491)
..|..|++.+.+..++.+.+-+++.. +++.+...++.....|.++..+..--+|..-++++.+
T Consensus 83 a~RLpsaL~~~lt~llvy~larrl~~--~r~~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~l 145 (552)
T PRK13279 83 GVRFGSVFSTLLSALLVYWLALRLWR--DRRTALLAALIYLSLFLVYGIGTYAVLDPMITLWLTA 145 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 88999999888777888887776632 1234556677778888888888877889877766553
No 10
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=82.31 E-value=34 Score=39.87 Aligned_cols=121 Identities=22% Similarity=0.293 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCC--cc---ccccChHHHHHhhhcC-CCccCCCCCC-CCh---------hHHHHHHHHhhh
Q 048739 8 VIVSFWVIPISILVNRVVPEP--YM---DEIFHVPQAQQYCKGN-FKSWDPMITT-PPG---------LYYLSLAYVASL 71 (491)
Q Consensus 8 ~~~~~~~~~i~~~Vn~~vpeP--Ym---DEiFHipQaQ~YC~g~-f~~WDpKITT-pPG---------LYlls~~~~a~~ 71 (491)
+++....+.+...-.. ..++ |+ |+-+|.+|++-.-+.. +..|-|..+. ||| +|+.+.... .+
T Consensus 25 i~~~~f~v~~~~~~~~-~~~~g~y~~e~Dpyy~~r~~~~~l~~g~~~~~~~~~~~YP~G~~i~~~pl~~~l~~~~~~-~~ 102 (773)
T COG1287 25 ILVLGFLVRAFTRSYA-FDDPGVYFGEFDPYYHYRLIENLLKNGPPRDFFDPYDNYPPGSPIDFPPLFLYLTAALGL-IL 102 (773)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCcccCCCCcHHHHHHHHHHHHhCCCccCCChhhcCCCCCCCCCCchHHHHHHHHHH-HH
Confidence 3444434444443332 3333 66 7789999999876553 5545555566 777 344433321 00
Q ss_pred cccccccccccccccCchhHHhh----hhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccc
Q 048739 72 FPGMLTVKAVSFFDVCSTAVLRS----TNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTD 146 (491)
Q Consensus 72 ~~~~~~~~~~~~~~~Cs~~~LR~----~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTD 146 (491)
.. ... ..++. ..+++...+.+-++...|++.. ++.+..-|+-+++-|..+.=+.+-+.|
T Consensus 103 ~~---------~~~----~~~~~~~~~~PailG~L~vI~vYl~~r~i~~---~~~g~~aa~ll~~~p~~~~rt~~G~~d 165 (773)
T COG1287 103 GS---------IFP----VSLETAALLFPAILGVLTVIPVYLLGRRILG---DKTGLLAALLLALAPGYLSRTVAGFYD 165 (773)
T ss_pred Hc---------cCc----hHHHHHHHHhhHHHhhHHHHHHHHHHHHHhc---chhhHHHHHHHHHhhHHHHHhhcCccC
Confidence 00 001 22222 2333343444555555565543 456778889999999955555555554
No 11
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=81.15 E-value=17 Score=34.76 Aligned_cols=61 Identities=18% Similarity=0.128 Sum_probs=48.0
Q ss_pred HHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhHHHHH
Q 048739 128 VVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLKKKYLFSALLGAFAVLIRQTNIIWMIFV 189 (491)
Q Consensus 128 ~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~~~~~~sal~G~~sl~fRQTNIvWvaf~ 189 (491)
..+++.|. .-=-..--+|.....+++.++....++|.+.++++-.++...+|+-++-..+.
T Consensus 60 ~~~~~~p~-~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~l 120 (241)
T PF09594_consen 60 LLLAFPPV-LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPAL 120 (241)
T ss_pred HHHHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555 44444568899999999999988888888888888889999999988877743
No 12
>PLN02816 mannosyltransferase
Probab=80.50 E-value=53 Score=36.89 Aligned_cols=162 Identities=13% Similarity=0.189 Sum_probs=72.5
Q ss_pred HHHHHHHHhhhcCCCCcc--ccccChHHHHH---hhhcCCC-ccCCCCCCC--ChhHHHHHHHHhhhccccccccccccc
Q 048739 13 WVIPISILVNRVVPEPYM--DEIFHVPQAQQ---YCKGNFK-SWDPMITTP--PGLYYLSLAYVASLFPGMLTVKAVSFF 84 (491)
Q Consensus 13 ~~~~i~~~Vn~~vpePYm--DEiFHipQaQ~---YC~g~f~-~WDpKITTp--PGLYlls~~~~a~~~~~~~~~~~~~~~ 84 (491)
..+..++.+|.....-|. ||.|--..--+ |=.|.-+ ||.+.|-.. |++|-..+-..+. . + .+
T Consensus 43 ~~~~~~R~~~al~~~t~f~pDE~fQslE~ah~~vfG~G~lTWEw~~~lRS~~~Pll~a~~~~~~~~-l------~---~~ 112 (546)
T PLN02816 43 LFCLAFRVVNALLIQTYFNPDEHWQSLEVAHRTIFGYGYMTWEWKRGIRSYLHPMLFAFLYKLLQV-T------G---LD 112 (546)
T ss_pred HHHHHHHHHHHHHccccCCCCchhhhHHHHHHHHhCCcccceecCCCccchhHHHHHHHHHHHHHH-h------c---CC
Confidence 334455666666322333 99887643333 2234222 788877765 4443332211111 0 0 01
Q ss_pred -ccCchhHHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHH-HhhhhhHHhhhhhhccchhHHHHHHHHHHHHh-
Q 048739 85 -DVCSTAVLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVV-LALYPLHWFFSFLYYTDVASLTAVLAMYLACL- 161 (491)
Q Consensus 85 -~~Cs~~~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~-ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l- 161 (491)
...-....|..-.+.+.++-+-++++.++...+ +. ..+++. ....|-.|++.-==+....-|.+++.++....
T Consensus 113 ~~~~~~~~pRl~~al~sal~D~~l~kl~~~~~g~---~~-A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~ 188 (546)
T PLN02816 113 TPYIMIKAPRLMQSIFSAIGDLYLYKLSDALYGG---NV-ATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPC 188 (546)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc---hH-HHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhc
Confidence 111124456655554444444555555544322 11 122221 12222222211111233333444444444321
Q ss_pred --------hhhhHHHHHHHHHHHhhhhhhhh-HHHH
Q 048739 162 --------KKKYLFSALLGAFAVLIRQTNII-WMIF 188 (491)
Q Consensus 162 --------~~~~~~sal~G~~sl~fRQTNIv-Wvaf 188 (491)
..+...+..++.+|+.+|-||++ |+..
T Consensus 189 ~~~~~~~~~~~~~~~L~la~la~~iRPt~ailwl~l 224 (546)
T PLN02816 189 IRDSSIDYPVNRKWGLVIAALACAIRPTSAVIWLYV 224 (546)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233556777789999999986 7764
No 13
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=75.27 E-value=73 Score=34.71 Aligned_cols=69 Identities=22% Similarity=0.240 Sum_probs=54.9
Q ss_pred hHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 048739 124 TLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLKKKYLFSALLGAFAVLIRQTNIIWMIFVACIG 193 (491)
Q Consensus 124 ~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~~~~~~sal~G~~sl~fRQTNIvWvaf~a~~~ 193 (491)
...++..++.|--.|++. =||+-...++.+.+.+...+++.+.+++++.+|-.+|-+=|+-+++.++..
T Consensus 145 ~~a~ll~~~~PasiF~sa-~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~ 213 (443)
T PF04188_consen 145 LLAALLFIFSPASIFLSA-PYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYEL 213 (443)
T ss_pred HHHHHHHHHccHHHHhhc-CccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345555566777777764 579999999988888888888899999999999999998888888765543
No 14
>PF14897 EpsG: EpsG family
Probab=66.98 E-value=1.4e+02 Score=29.75 Aligned_cols=131 Identities=17% Similarity=0.238 Sum_probs=80.9
Q ss_pred CCccccccChHHHHHhhhcCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhhHHHHHHHHH
Q 048739 27 EPYMDEIFHVPQAQQYCKGNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNGVLAVLCSII 106 (491)
Q Consensus 27 ePYmDEiFHipQaQ~YC~g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~~~~~~~~~l 106 (491)
++.-|..=+..+-+.+.++++. ||. .+..||.++++.+.-. -..+....+..+..... ..
T Consensus 20 ~~g~D~~~Y~~~y~~~~~~~~~-~~~-~~~E~~~~~l~~~~~~---------------~~~~~~~~~~i~~~i~~---~~ 79 (330)
T PF14897_consen 20 GVGTDYYNYYEIYDEISNNSFN-FSE-YGFEPGFYLLNYLFSY---------------FGFNYQFFFFIISFISL---FL 79 (330)
T ss_pred CCCccHHHHHHHHHHHhccccc-ccc-ccCCHHHHHHHHHHHH---------------HCCCHHHHHHHHHHHHH---HH
Confidence 5556999999999999988876 655 8999999988865421 11234555555544332 23
Q ss_pred HHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhcc-------chhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhh
Q 048739 107 LYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYT-------DVASLTAVLAMYLACLKKKYLFSALLGAFAVLIR 179 (491)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYT-------Dv~St~~VL~~y~~~l~~~~~~sal~G~~sl~fR 179 (491)
....+++..++ . -..++.+.++...+|. -..+..+.+.++..-.+|+.+.+.++.++|.++=
T Consensus 80 ~~~~i~~~~~~----~-------~~~~~~~l~~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH 148 (330)
T PF14897_consen 80 FFFFIKKYSKN----Y-------PIFLSLFLFFSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFH 148 (330)
T ss_pred HHHhHHHcccc----h-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 33333332221 1 1233333444444444 3444456666666555677777788889999999
Q ss_pred hhhhhHHHH
Q 048739 180 QTNIIWMIF 188 (491)
Q Consensus 180 QTNIvWvaf 188 (491)
.+-++.+.+
T Consensus 149 ~Saii~l~~ 157 (330)
T PF14897_consen 149 YSAIIFLPL 157 (330)
T ss_pred HHHHHHHHH
Confidence 999887775
No 15
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=66.59 E-value=21 Score=38.49 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhh-ccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 048739 98 VLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLY-YTDVASLTAVLAMYLACLKKKYLFSALLGAFAV 176 (491)
Q Consensus 98 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLy-YTDv~St~~VL~~y~~~l~~~~~~sal~G~~sl 176 (491)
....++.+.+|++.+..-+.. +++....+..++.|....+|.+| =||-.=|+...++.++--+++...|++++.+|.
T Consensus 125 ~~~~~~ay~lY~~tk~~y~~~--~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~ 202 (420)
T COG5542 125 IADFVAAYFLYKITKLRYGLG--SMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALAT 202 (420)
T ss_pred HHHHHHHHHHHHHHHHHcccc--hhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 344556667777655432211 23333333444455555555554 399888888888877777778888999999999
Q ss_pred hhhhhhhhHHHHHHHH
Q 048739 177 LIRQTNIIWMIFVACI 192 (491)
Q Consensus 177 ~fRQTNIvWvaf~a~~ 192 (491)
++|-+-|+|.-+++..
T Consensus 203 l~Rsngi~~~p~fl~~ 218 (420)
T COG5542 203 LFRSNGIFLSPLFLIP 218 (420)
T ss_pred HhccchhHHHHHHHHH
Confidence 9999999999877543
No 16
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=61.51 E-value=1.5e+02 Score=31.12 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=69.1
Q ss_pred CCChhHHHHHHHH--hhhcccccccccccccccCchhHHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhh
Q 048739 56 TPPGLYYLSLAYV--ASLFPGMLTVKAVSFFDVCSTAVLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALY 133 (491)
Q Consensus 56 TpPGLYlls~~~~--a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialf 133 (491)
.||.-|+.+.+.. +++. + ....-....-|..|++...+...++.++.++ .+ .....+++.
T Consensus 95 y~p~~Ylp~alGi~ig~ll------~---l~~~~~~~l~Rl~nll~~~~l~~~Ai~~~p~-------~k--~l~~~i~l~ 156 (389)
T PF09913_consen 95 YPPLYYLPQALGIWIGRLL------G---LSVLVMYYLGRLFNLLLYALLVYLAIKLAPR-------GK--WLLALIALL 156 (389)
T ss_pred CCcHhhHHHHHHHHHHHHh------C---CCHHHHHHHHHHHHHHHHHHHHHHHHHHcch-------hH--HHHHHHHHH
Confidence 5999999886632 2111 1 0111224677999998876665555444321 11 336788999
Q ss_pred hhHHhhhhhhccchhHHHHHHHHHHHHhh---------hhhHHHHHHHHHHHhhhhhhhhHHH
Q 048739 134 PLHWFFSFLYYTDVASLTAVLAMYLACLK---------KKYLFSALLGAFAVLIRQTNIIWMI 187 (491)
Q Consensus 134 P~lfFFsfLyYTDv~St~~VL~~y~~~l~---------~~~~~sal~G~~sl~fRQTNIvWva 187 (491)
|.--+-..=+-.|.....+..++....++ |.....++.+.+....|.+.+..+.
T Consensus 157 Pm~~~~~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~~l~~ 219 (389)
T PF09913_consen 157 PMTLFQAASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYIPLLL 219 (389)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888889998887655444433333 1124556666667888844444433
No 17
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=55.90 E-value=2.1e+02 Score=31.03 Aligned_cols=114 Identities=22% Similarity=0.193 Sum_probs=76.2
Q ss_pred ChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHH
Q 048739 58 PGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHW 137 (491)
Q Consensus 58 PGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lf 137 (491)
|-||+++-+|. +. -+...|-....+......+.++++.++... +++.+...++.-.+.|.++
T Consensus 44 Pil~ll~Ply~--l~--------------Ps~~tLli~Qal~la~~~~pl~~lar~~~~--~~~~a~~~~~~ylL~p~~~ 105 (449)
T PF09852_consen 44 PILYLLAPLYR--LF--------------PSPLTLLIVQALLLALGAIPLYRLARRRLL--SRRLALLIALAYLLSPGLQ 105 (449)
T ss_pred HHHHHHHHHHH--Hh--------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHHhHHHH
Confidence 67777776552 12 234566666666554455566676665421 3455667777778888888
Q ss_pred hh-hhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhHHHHH
Q 048739 138 FF-SFLYYTDVASLTAVLAMYLACLKKKYLFSALLGAFAVLIRQTNIIWMIFV 189 (491)
Q Consensus 138 FF-sfLyYTDv~St~~VL~~y~~~l~~~~~~sal~G~~sl~fRQTNIvWvaf~ 189 (491)
.- .|=|..|+..+-++++++....+|+.+...++.++.+++|-.--+-++.+
T Consensus 106 ~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~v~~~ 158 (449)
T PF09852_consen 106 GANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLTVAGI 158 (449)
T ss_pred hhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 64 34567788887667777776777888888889999999998776666544
No 18
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=54.52 E-value=3.5e+02 Score=30.17 Aligned_cols=160 Identities=21% Similarity=0.232 Sum_probs=110.5
Q ss_pred HHHHhhhcCCCCccccccChHHHHHhhh-cCCCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhh
Q 048739 17 ISILVNRVVPEPYMDEIFHVPQAQQYCK-GNFKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRST 95 (491)
Q Consensus 17 i~~~Vn~~vpePYmDEiFHipQaQ~YC~-g~f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~ 95 (491)
..++-|-=-+.-.-||--|-.=+-+|.+ |.|+ .||-+- =|=||.+-.+.... ..-|-...|.+
T Consensus 27 ~~RL~~Lg~r~~h~DEs~~~~w~Lk~l~~Gaw~-YrPi~H-GPfL~hvn~avF~~--------------lGasDataRlv 90 (556)
T COG4745 27 LARLYNLGLRPFHFDESRHATWILKYLEQGAWS-YRPIYH-GPFLYHVNYAVFGL--------------LGASDATARLV 90 (556)
T ss_pred HHHHHhcCCCccccchhhHHHHHHHHHhcCcce-eccccc-Cchhhhhhhhhhhh--------------cccchhhhhhh
Confidence 3355555455558899999998999986 5665 688665 45667665543211 12345789998
Q ss_pred hhHHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhhhhhhccchhHHHHHHHHHHHHhh----hh--h-HHH
Q 048739 96 NGVLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFFSFLYYTDVASLTAVLAMYLACLK----KK--Y-LFS 168 (491)
Q Consensus 96 N~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFFsfLyYTDv~St~~VL~~y~~~l~----~~--~-~~s 168 (491)
-++...+++...+..+++++ +.+....+..+++-|.+--||=..=.|+.-..+.+++....-+ +| + ..|
T Consensus 91 vAv~G~llpL~awL~R~rL~----d~evlal~~LLA~sPvlVYYSRFmR~Dl~la~ftl~aVg~~vR~lDt~R~~yL~~s 166 (556)
T COG4745 91 VAVTGVLLPLTAWLYRTRLG----DKEVLALATLLAFSPVLVYYSRFMRNDLLLAAFTLLAVGFAVRYLDTERFRYLYAS 166 (556)
T ss_pred HHHhhhHHHHHHHHHHHhcc----chHHHHHHHHHhcChhhhhHHHHHhhhHHHHHHHHHHHHHHHHHhhcccccchhhh
Confidence 88877777777766666553 4566778888999999999998888999887777666554322 22 1 355
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHH
Q 048739 169 ALLGAFAVLIRQTNIIWMIFVACIGVIN 196 (491)
Q Consensus 169 al~G~~sl~fRQTNIvWvaf~a~~~~l~ 196 (491)
+.--.+++.-...-.+|++.+.|.+.+-
T Consensus 167 A~~lalAftaKEnall~~~~f~ga~alv 194 (556)
T COG4745 167 AVSLALAFTAKENALLYVAAFLGASALV 194 (556)
T ss_pred hhhhhhhhhhcccceeHHHHHhchhHHH
Confidence 6555778888899999999876554443
No 19
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=47.35 E-value=57 Score=35.11 Aligned_cols=118 Identities=22% Similarity=0.270 Sum_probs=54.6
Q ss_pred cccccChHHHHHhhhcC------------CCccCCCCCCCChhHHHHHHHHhhhcccccccccccccccCchhHHhhhhh
Q 048739 30 MDEIFHVPQAQQYCKGN------------FKSWDPMITTPPGLYYLSLAYVASLFPGMLTVKAVSFFDVCSTAVLRSTNG 97 (491)
Q Consensus 30 mDEiFHipQaQ~YC~g~------------f~~WDpKITTpPGLYlls~~~~a~~~~~~~~~~~~~~~~~Cs~~~LR~~N~ 97 (491)
.|+-+|.+|++..-++. |--|...++-||++..++....+. ..+.. ..+..+.| .-.--+
T Consensus 32 ~Dpyy~~r~~~~~~~~G~~~~~~~fd~~~~yP~G~~i~~~pl~~~l~~~~~~~-~~~~~---~~~l~~v~----~~~ppv 103 (483)
T PF02516_consen 32 FDPYYHYRLIEYIVNNGIFPFYNWFDPFTWYPWGRPIDWPPLFPYLTAAFYAI-LGGFG---PVSLYEVA----FWLPPV 103 (483)
T ss_dssp -GGGEETTEE--S-HHHHHHHHHHHHHHS---TTS---TT-HHHHHHHHHHHS--SS-H---H----HHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcccCcCCccccCCCCCccCcccHHHHHHHHHHHH-HHHhc---chhHHHHH----HHHHHH
Confidence 57788888887765551 223455678899999886544321 11100 00001112 111122
Q ss_pred HHHHHHHHHHHHHHHHhccCcchhhhhHHHHHHhhhhhHHhh--hhhhccchhHHHHHHHHHHH
Q 048739 98 VLAVLCSIILYEIITYLRPALDDRKATLQAVVLALYPLHWFF--SFLYYTDVASLTAVLAMYLA 159 (491)
Q Consensus 98 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~a~~ialfP~lfFF--sfLyYTDv~St~~VL~~y~~ 159 (491)
++++ +.+.++-+-|++. ++..+...|+.+++.|-.+.= .+-|=||+..+++.+++...
T Consensus 104 l~~L-~vi~~y~~~~~~~---~~~~Gl~aA~l~a~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~ 163 (483)
T PF02516_consen 104 LGAL-TVIPVYLLGRRLG---GRKAGLLAAFLLAISPGYLSRTMAGFYDHHMLELFFPLLIIYF 163 (483)
T ss_dssp HGGG-GHHHHHHHHHHTT----HHHHHHHHHHHTTSHHHHHTSSTT--SGGGGTTHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHhC---CCchHHHHHHHHHHhHHHHHHhcCCCcccchHHHHHHHHHHHH
Confidence 2222 2233444444442 334566888999999995543 34567888888776655444
No 20
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=33.59 E-value=16 Score=41.97 Aligned_cols=19 Identities=42% Similarity=0.567 Sum_probs=17.0
Q ss_pred ccccccChHHHHHhhhcCCCccCCCCC
Q 048739 29 YMDEIFHVPQAQQYCKGNFKSWDPMIT 55 (491)
Q Consensus 29 YmDEiFHipQaQ~YC~g~f~~WDpKIT 55 (491)
|.||.||.+|.+ +||+++|
T Consensus 441 yWDEGFH~l~i~--------~~D~~~t 459 (849)
T KOG2161|consen 441 YWDEGFHQLLIW--------EWDFDLT 459 (849)
T ss_pred eeccchhhhhhh--------hcCccch
Confidence 999999999987 5888887
No 21
>PF15513 DUF4651: Domain of unknown function (DUF4651)
Probab=26.29 E-value=21 Score=28.61 Aligned_cols=10 Identities=50% Similarity=1.175 Sum_probs=8.4
Q ss_pred eccCCccchh
Q 048739 382 LLADNRHYPF 391 (491)
Q Consensus 382 lLADNRHYtF 391 (491)
.++|.|||+|
T Consensus 41 V~eDgR~y~F 50 (62)
T PF15513_consen 41 VMEDGRHYTF 50 (62)
T ss_pred EEeCCCEEEE
Confidence 4789999987
No 22
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=20.02 E-value=1.6e+02 Score=25.78 Aligned_cols=29 Identities=7% Similarity=0.256 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Q 048739 165 YLFSALLGAFAVLIRQTNIIWMIFVACIG 193 (491)
Q Consensus 165 ~~~sal~G~~sl~fRQTNIvWvaf~a~~~ 193 (491)
..++.++|.+++++|+-=+.|++++.+.+
T Consensus 36 ~~L~~~~~m~gl~mr~K~~aW~al~~s~~ 64 (103)
T PF03669_consen 36 SFLGMIFSMAGLMMRNKWCAWAALFFSCQ 64 (103)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36788999999999999999999774443
Done!