Query         048742
Match_columns 472
No_of_seqs    173 out of 1964
Neff          11.4
Searched_HMMs 46136
Date          Fri Mar 29 12:37:35 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048742.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048742hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 5.1E-84 1.1E-88  599.8  45.3  435   25-472    16-456 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 1.6E-77 3.5E-82  579.3  44.5  434   32-472    54-500 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 3.4E-78 7.4E-83  551.6  37.4  420   32-472    28-464 (499)
  4 PLN03234 cytochrome P450 83B1; 100.0 3.2E-77 6.9E-82  575.4  43.9  433   31-472    24-462 (499)
  5 PLN02183 ferulate 5-hydroxylas 100.0 4.3E-77 9.3E-82  574.6  43.0  439   26-472    27-475 (516)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 7.5E-77 1.6E-81  573.1  44.5  435   32-472    31-472 (517)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 2.9E-76 6.3E-81  565.4  43.9  432   32-472    28-463 (504)
  8 PLN03112 cytochrome P450 famil 100.0 3.5E-76 7.5E-81  569.7  44.2  454   13-472     9-471 (514)
  9 PLN02394 trans-cinnamate 4-mon 100.0 4.7E-75   1E-79  560.9  43.7  432   32-472    27-466 (503)
 10 PLN02966 cytochrome P450 83A1  100.0   4E-75 8.7E-80  559.6  42.0  432   30-472    24-463 (502)
 11 PTZ00404 cytochrome P450; Prov 100.0 3.3E-74 7.1E-79  552.0  42.8  419   31-472    25-450 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0 2.5E-73 5.4E-78  548.9  44.1  437   32-472    32-483 (519)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.8E-73 3.9E-78  541.1  36.1  423   33-472    33-464 (497)
 14 PLN02655 ent-kaurene oxidase   100.0 6.2E-73 1.3E-77  539.4  39.7  419   37-472     1-431 (466)
 15 PLN02500 cytochrome P450 90B1  100.0 3.9E-73 8.5E-78  544.7  36.6  410   32-472    35-460 (490)
 16 PLN02290 cytokinin trans-hydro 100.0 7.1E-73 1.5E-77  546.9  36.6  418   33-472    40-483 (516)
 17 PLN02774 brassinosteroid-6-oxi 100.0 1.8E-72 3.9E-77  535.7  35.9  421   13-472     9-434 (463)
 18 PLN03018 homomethionine N-hydr 100.0   4E-71 8.6E-76  530.5  43.7  434   34-472    39-490 (534)
 19 PF00067 p450:  Cytochrome P450 100.0 2.4E-72 5.2E-77  542.1  27.1  423   37-472     1-433 (463)
 20 PLN03195 fatty acid omega-hydr 100.0 1.2E-70 2.7E-75  530.8  36.9  451    4-472     3-484 (516)
 21 KOG0159 Cytochrome P450 CYP11/ 100.0 2.1E-70 4.5E-75  488.4  33.3  419   35-472    50-486 (519)
 22 PLN02196 abscisic acid 8'-hydr 100.0 4.4E-70 9.6E-75  518.8  35.9  396   32-472    32-432 (463)
 23 PLN02169 fatty acid (omega-1)- 100.0 6.4E-70 1.4E-74  520.5  36.6  422   33-472    29-468 (500)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 3.4E-69 7.4E-74  512.2  34.5  408   31-472     3-421 (452)
 25 PLN02738 carotene beta-ring hy 100.0 1.3E-68 2.8E-73  518.3  37.7  412   47-472   143-562 (633)
 26 PLN02302 ent-kaurenoic acid ox 100.0 6.7E-68 1.5E-72  511.1  38.7  406   32-472    39-457 (490)
 27 KOG0684 Cytochrome P450 [Secon 100.0 3.2E-68 6.9E-73  462.3  31.6  420   27-472    23-452 (486)
 28 PLN02987 Cytochrome P450, fami 100.0 5.7E-67 1.2E-71  495.4  38.3  403   32-472    27-439 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0   1E-66 2.2E-71  498.7  34.8  422   36-472    13-450 (489)
 30 PLN02426 cytochrome P450, fami 100.0 4.4E-65 9.6E-70  486.3  37.1  404   43-472    49-466 (502)
 31 PLN02648 allene oxide synthase 100.0 7.1E-60 1.5E-64  443.2  26.7  401   32-472    14-454 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.2E-55   7E-60  407.3  29.7  351   56-472    24-380 (411)
 33 PF12508 DUF3714:  Protein of u  66.7     1.2 2.6E-05   36.8  -1.1   46  357-404    51-96  (200)
 34 KOG1412 Aspartate aminotransfe  60.7      39 0.00084   30.1   6.7   66  292-373   340-407 (410)
 35 PF12554 MOZART1:  Mitotic-spin  60.4      35 0.00075   20.7   4.5   43  299-341     6-48  (48)
 36 PF05952 ComX:  Bacillus compet  55.3      13 0.00029   23.4   2.3   23  321-343     4-26  (57)
 37 KOG3506 40S ribosomal protein   53.7     5.9 0.00013   24.3   0.5   10  443-452    13-22  (56)
 38 PHA03049 IMV membrane protein;  52.2      45 0.00098   21.6   4.3   32   10-41      6-37  (68)
 39 KOG1411 Aspartate aminotransfe  51.5      70  0.0015   29.1   6.8   59  294-368   362-422 (427)
 40 PF01102 Glycophorin_A:  Glycop  51.3      24 0.00053   26.5   3.6   23   11-33     71-94  (122)
 41 PF05084 GRA6:  Granule antigen  47.0      35 0.00075   26.6   3.8   21   21-41    163-183 (215)
 42 KOG3653 Transforming growth fa  46.8 1.3E+02  0.0028   28.8   8.1   38   65-102   221-258 (534)
 43 TIGR03779 Bac_Flav_CT_M Bacter  42.5     4.4 9.5E-05   37.6  -1.7   44  358-403   255-298 (410)
 44 PRK06789 flagellar motor switc  40.8      26 0.00056   23.6   2.1   41  364-404    21-63  (74)
 45 PF14459 Prok-E2_C:  Prokaryoti  37.9      14 0.00031   26.5   0.6   21  435-455   101-121 (131)
 46 COG0851 MinE Septum formation   36.0      56  0.0012   22.8   3.1   19  329-347    35-53  (88)
 47 PF05961 Chordopox_A13L:  Chord  35.5 1.2E+02  0.0026   19.9   4.3   15   10-24      6-20  (68)
 48 KOG0114 Predicted RNA-binding   34.8 1.8E+02  0.0038   21.2   5.5   39   57-95     32-76  (124)
 49 PF13268 DUF4059:  Protein of u  33.1      90   0.002   20.7   3.6   29    2-30      6-34  (72)
 50 PF15330 SIT:  SHP2-interacting  33.0 1.5E+02  0.0032   21.8   5.2   12   42-53     45-56  (107)
 51 PF09551 Spore_II_R:  Stage II   32.8      42  0.0009   25.6   2.4   16  387-402    86-101 (130)
 52 PF14129 DUF4296:  Domain of un  31.7 1.8E+02  0.0039   20.3   6.5   48  297-344    31-78  (87)
 53 PF11138 DUF2911:  Protein of u  31.0      66  0.0014   25.2   3.3   41  383-424    52-99  (145)
 54 PHA02902 putative IMV membrane  29.1 1.6E+02  0.0034   19.0   4.0   24    8-31      4-27  (70)
 55 PF13893 RRM_5:  RNA recognitio  28.7 1.5E+02  0.0031   18.2   4.5   35   61-95      2-40  (56)
 56 COG1759 5-formaminoimidazole-4  28.4      84  0.0018   28.2   3.8   69  362-465   276-351 (361)
 57 PF10717 ODV-E18:  Occlusion-de  28.2 1.9E+02  0.0042   19.9   4.6   22   10-31     27-48  (85)
 58 PF14483 Cut8_M:  Cut8 dimerisa  28.0   1E+02  0.0023   17.6   2.9   13  326-338    23-35  (38)
 59 PF08776 VASP_tetra:  VASP tetr  27.1      89  0.0019   18.0   2.4   28  330-370    10-37  (40)
 60 PF04798 Baculo_19:  Baculoviru  25.7      21 0.00045   27.6  -0.2   34  420-458    43-76  (146)
 61 PF13625 Helicase_C_3:  Helicas  25.3 1.6E+02  0.0036   22.3   4.7   41   54-96     74-114 (129)
 62 PF08492 SRP72:  SRP72 RNA-bind  24.9      49  0.0011   21.1   1.3    7  421-427    44-50  (59)
 63 KOG4152 Host cell transcriptio  24.0      59  0.0013   31.1   2.2   30   23-52    115-144 (830)
 64 PLN02196 abscisic acid 8'-hydr  23.8 1.3E+02  0.0028   29.1   4.7   37    8-44      5-41  (463)
 65 PF09926 DUF2158:  Uncharacteri  23.5      91   0.002   19.4   2.3   18   67-84      3-20  (53)
 66 PF07849 DUF1641:  Protein of u  22.6 1.1E+02  0.0024   17.9   2.4   18  320-337    13-30  (42)
 67 PF14550 Peptidase_U35_2:  Puta  22.1      61  0.0013   24.5   1.6   21  383-403    73-93  (122)
 68 PF00558 Vpu:  Vpu protein;  In  21.8 1.4E+02  0.0031   20.5   3.2    7    1-7       1-7   (81)
 69 TIGR02837 spore_II_R stage II   21.8      91   0.002   25.0   2.6   16  387-402   121-136 (168)
 70 PF07886 BA14K:  BA14K-like pro  21.5      70  0.0015   17.3   1.3   16  437-452    16-31  (31)
 71 PF10915 DUF2709:  Protein of u  21.4 1.8E+02  0.0039   23.7   4.1   52   43-96     90-147 (238)
 72 PRK13991 cell division topolog  21.0   2E+02  0.0043   20.2   3.8   19  329-347    35-53  (87)
 73 COG3954 PrkB Phosphoribulokina  21.0 2.5E+02  0.0054   23.2   4.9   60  308-371    14-89  (289)
 74 PF05545 FixQ:  Cbb3-type cytoc  20.9 1.6E+02  0.0035   17.8   3.1    8   24-31     26-33  (49)
 75 PRK10597 DNA damage-inducible   20.7 2.9E+02  0.0064   19.1   4.5   39   57-95     23-69  (81)
 76 PTZ00218 40S ribosomal protein  20.5      44 0.00096   20.8   0.5   10  443-452    11-20  (54)
 77 PRK13467 F0F1 ATP synthase sub  20.3 1.7E+02  0.0038   19.2   3.2   25  316-340    20-44  (66)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.1e-84  Score=599.83  Aligned_cols=435  Identities=44%  Similarity=0.768  Sum_probs=384.8

Q ss_pred             HHHhhcCCCCCCCCCCCCCccccccccCCCC-hhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCC
Q 048742           25 SWLIKKSRTPPLPPGPLGLPVLGNLLSIEPD-FHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANR  103 (472)
Q Consensus        25 ~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~  103 (472)
                      .++.+.+++.+.||||.++|++||++.+... ++..+.+++++||+||.+|+|+.++|+|+|++.++|++.+++..|++|
T Consensus        16 ~~~~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~R   95 (489)
T KOG0156|consen   16 LFFKKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADR   95 (489)
T ss_pred             HHHHhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCC
Confidence            3344444558899999999999999999877 999999999999999999999999999999999999999999999999


Q ss_pred             CC-cchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-CCccchHHHHHHHH
Q 048742          104 DP-PASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-GSPINLGEQMFLAI  180 (472)
Q Consensus       104 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~~~~  180 (472)
                      +. ........++..+++++.+|+.|+.+||+....+++...++.. ....++++.+++.+.... ++++|+.+.+..++
T Consensus        96 p~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~  175 (489)
T KOG0156|consen   96 PDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLV  175 (489)
T ss_pred             CCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHH
Confidence            87 2233556667788998989999999999999989999988888 777889999999998621 27899999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhh-hccccc-chhhhHHHHHHHHHHHHHHHHHHHHH
Q 048742          181 LNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFP-TLAWLD-LQGIESKTKKLVLWFDRIFDSVIVQR  258 (472)
Q Consensus       181 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (472)
                      .++|++++||.++...+.+.. .++.+.+.+.....+...+.+++| ++.++. ..+..++......++..++++.++++
T Consensus       176 ~nvI~~~~fG~rf~~~~~~~~-~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh  254 (489)
T KOG0156|consen  176 GNVICRMLFGRRFEEEDEEEF-LELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEH  254 (489)
T ss_pred             HHHHHHHHhCCccccCCchHH-HHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987644444 678999999999999888999999 566664 33567777777777999999999998


Q ss_pred             HHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHH
Q 048742          259 MKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQ  338 (472)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  338 (472)
                      ++.. ..   +   +. .|+++.|+...++.+.+. +|+++|.+.+..+++||.|||++|+.|++.+|++||++|+|+++
T Consensus       255 ~~~~-~~---~---~~-~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qe  325 (489)
T KOG0156|consen  255 REKI-GD---E---EG-RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQE  325 (489)
T ss_pred             Hhhh-cc---C---CC-CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            8754 11   1   23 899999999877544333 99999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          339 ELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       339 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      ||++++|.++.++.+|+.+||||+|+|+|++|++|++|..++|.+.+|+.++||.|||||.|+++.|++|+||++|+||+
T Consensus       326 EId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~  405 (489)
T KOG0156|consen  326 EIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPE  405 (489)
T ss_pred             HHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCcc
Confidence            99999999888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||||++++   +.++....++|||.|+|.|||..+|.+|+.++++.||++|
T Consensus       406 eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F  456 (489)
T KOG0156|consen  406 EFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRF  456 (489)
T ss_pred             ccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHhee
Confidence            99999999974   1122556899999999999999999999999999999987


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.6e-77  Score=579.29  Aligned_cols=434  Identities=31%  Similarity=0.578  Sum_probs=341.3

Q ss_pred             CCCCCCCCCCCCccccccccCCCC--hhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPD--FHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      ++.+.||||+++|++||++.+..+  .+.++.++.++|| +||++++|++++++|+||+.+++++.++...|+.++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            345789999999999999887432  3678899999999 7999999999999999999999999998888887764332


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc--CCccchHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV--GSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~~i~  185 (472)
                      ....+.+..+.++..+|+.|+++|+++.+.++++...+.+ +.+.+.++.+++.+.+..  ++++|+.+.+..+++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            2222222234577888999999999998767776666666 777888888888776532  4679999999999999999


Q ss_pred             HHHhcCCCCCCc----ccchhHHHHHHHHHHHHHhC---CCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 048742          186 NMLWGSSLHGEE----RSSVGVEFRQVVGEIVEMLG---KPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQR  258 (472)
Q Consensus       186 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (472)
                      +++||.++....    +... .+..+.++.+.....   ...+.+.+|++.++...+..+...+..+.+.+++.+.++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPT-LEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHhCCcccccccccccchh-HHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999874321    1111 223333344333221   11233456655443222333445555667788888888877


Q ss_pred             HHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHH
Q 048742          259 MKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQ  338 (472)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  338 (472)
                      ++....+   ..  ....|+++.|++..++.. ...++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       293 ~~~~~~~---~~--~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        293 IKMWREG---KR--TQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             HHHHhcc---CC--CCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            6533111   00  234699999998643211 22489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          339 ELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       339 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      |++++++++..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|+++.|++||||++|+||+
T Consensus       367 EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~  446 (543)
T PLN02971        367 EIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPL  446 (543)
T ss_pred             HHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcc
Confidence            99999987778999999999999999999999999999877899999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||||++++++......+..|+|||+|+|.|+|++||++|+++++++||++|
T Consensus       447 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f  500 (543)
T PLN02971        447 SFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGF  500 (543)
T ss_pred             ccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            999999997543211122456799999999999999999999999999999987


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-78  Score=551.65  Aligned_cols=420  Identities=27%  Similarity=0.422  Sum_probs=335.9

Q ss_pred             CCCCCCCCCCCCccccccccCCC--ChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCC--Ccc
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEP--DFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRD--PPA  107 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~--~~~  107 (472)
                      +.++..|+|+++|++||+..+..  .+.....+...+||+++.++.+.++.++|+|||.+++|+.+..+.|.++.  ...
T Consensus        28 w~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~  107 (499)
T KOG0158|consen   28 WRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYG  107 (499)
T ss_pred             hccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcC
Confidence            55669999999999999998743  23444444444459999999999999999999999999999999999843  222


Q ss_pred             hhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcC--CccchHHHHHHHHHHHH
Q 048742          108 SALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVG--SPINLGEQMFLAILNVV  184 (472)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~--~~~d~~~~~~~~~~~~i  184 (472)
                      .... . -....++..+|++|+++|..++| .|+..+++.+ +.+++.++++++.+.....  +.+++.+.+..++.|+|
T Consensus       108 d~~~-~-l~~~~Lf~~~g~~WK~lR~~lsP-~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI  184 (499)
T KOG0158|consen  108 DPED-P-LSALNLFFLRGERWKRLRTKLSP-TFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVI  184 (499)
T ss_pred             CCCC-c-ccccCchhccCchHHHHHHhhcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHH
Confidence            2221 1 11255677889999999999998 9999999999 9999999999999988643  48899999999999999


Q ss_pred             HHHHhcCCCCCCcccchhHHHHHHHHHHHHH-hCCCcc----cchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 048742          185 MNMLWGSSLHGEERSSVGVEFRQVVGEIVEM-LGKPNI----SDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRM  259 (472)
Q Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  259 (472)
                      +.++||.+.++..++.  .+|...-...... .....+    ...+|.+....  ..........+.+.+.+...++.|.
T Consensus       185 ~~~AfG~~~~s~~d~~--~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~  260 (499)
T KOG0158|consen  185 GSCAFGLDANSLRDPK--AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQRE  260 (499)
T ss_pred             hHhhcccchhhhcCch--HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHH
Confidence            9999999998876554  4555544444333 111111    12233322211  0111223333444555555555552


Q ss_pred             HHhHhhhhhcccccccccHHHHHHHHhhcC--CC-CC-CCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHH
Q 048742          260 KIDAAKGQISKQNEENKDFLHFLLELKQQG--ED-KT-SLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRK  335 (472)
Q Consensus       260 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~-~~-~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~  335 (472)
                      ++.          ..+.|+++.+++.+...  .. .. .+|.+||+++++.|++||.||||+++++++|+||+||++|+|
T Consensus       261 ~~~----------~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~k  330 (499)
T KOG0158|consen  261 KEN----------IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDK  330 (499)
T ss_pred             hcC----------CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHH
Confidence            221          57899999999988531  11 11 599999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCcccccccccc-CeecCCCCEEEEeeecccCCCCCC
Q 048742          336 VQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVG-GYTIPKGSRVFVNVWSMHRDPEAW  414 (472)
Q Consensus       336 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~G~~v~~~~~~~~~d~~~~  414 (472)
                      ||+||++++.....+++|.+.+|+||++||+||||+||+++.. .|.+.+|++++ ++.||||+.|.++.+++||||++|
T Consensus       331 LreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~  409 (499)
T KOG0158|consen  331 LREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYW  409 (499)
T ss_pred             HHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccC
Confidence            9999999976554499999999999999999999999999995 69999999999 999999999999999999999999


Q ss_pred             CCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          415 QNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       415 ~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||++|+||||++++.+   ..++..|+|||.|||.|+|.+||.+|+|+.|++||++|
T Consensus       410 p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f  464 (499)
T KOG0158|consen  410 PEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNF  464 (499)
T ss_pred             CCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999987643   33677899999999999999999999999999999997


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.2e-77  Score=575.36  Aligned_cols=433  Identities=33%  Similarity=0.619  Sum_probs=350.1

Q ss_pred             CCCCCCCCCCCCCccccccccCCC-ChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchh
Q 048742           31 SRTPPLPPGPLGLPVLGNLLSIEP-DFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASA  109 (472)
Q Consensus        31 ~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~  109 (472)
                      +++.+.||||+++|++||+..+.. ++..++.+++++||++|++++++.++++++||+++++|+.++...|..++.....
T Consensus        24 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         24 KKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            355678999999999999998854 6888999999999999999999999999999999999999887777766643322


Q ss_pred             hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHH
Q 048742          110 LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMN  186 (472)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~  186 (472)
                      ....+......+...++.|+++|+.+...+|++.++..+ +.+.+.++++++.+...  .++.+|+.+.+..+++|++++
T Consensus       104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            222222223334566899999999865449999999888 99999999999999754  257899999999999999999


Q ss_pred             HHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          187 MLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLD-LQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      ++||.+++..+. .. .++.+.+.+.........+...+|++..+. +.+..++..+..+.+.+++.+.++++++.... 
T Consensus       184 ~~fG~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  260 (499)
T PLN03234        184 QAFGKRYNEYGT-EM-KRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP-  260 (499)
T ss_pred             HHhCCcccccch-hH-HHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence            999998865432 22 455555555544443333344455543321 12234566777788888888888876543210 


Q ss_pred             hhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVG  345 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  345 (472)
                          +  ....|+++.+++..++...+..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       261 ----~--~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~  334 (499)
T PLN03234        261 ----K--QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIG  334 (499)
T ss_pred             ----C--CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence                0  2356899999876543222336899999999999999999999999999999999999999999999999998


Q ss_pred             CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCC-CCCCCCCCCc
Q 048742          346 NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPER  424 (472)
Q Consensus       346 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R  424 (472)
                      ++..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++| +||++|||||
T Consensus       335 ~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR  414 (499)
T PLN03234        335 DKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPER  414 (499)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchh
Confidence            777789999999999999999999999999987679999999999999999999999999999999999 8999999999


Q ss_pred             cccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          425 FLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       425 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+++.+....+..+..|+|||+|+|.|+|++||++|++++++.|+++|
T Consensus       415 ~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f  462 (499)
T PLN03234        415 FMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKF  462 (499)
T ss_pred             hcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHhe
Confidence            997543222233566899999999999999999999999999999987


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=4.3e-77  Score=574.64  Aligned_cols=439  Identities=36%  Similarity=0.694  Sum_probs=347.9

Q ss_pred             HHhhcCCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC
Q 048742           26 WLIKKSRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP  105 (472)
Q Consensus        26 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~  105 (472)
                      ++.+..++.+.||||+++|++|+++.+....+.++.+++++||++|++++++.++++|+||+++++|+.++...|+.++.
T Consensus        27 ~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~  106 (516)
T PLN02183         27 LISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPA  106 (516)
T ss_pred             HHhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCc
Confidence            34444555678999999999999988766677889999999999999999999999999999999999987777776654


Q ss_pred             cchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH
Q 048742          106 PASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVV  184 (472)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i  184 (472)
                      .........+..+.++..+|+.|+++|+.+..++|+...++.+ +. .++++.+++.+....++++|+.+++..+++|++
T Consensus       107 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        107 NIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             ccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHH
Confidence            3222112222245677888999999999855448998888888 64 567899999986544778999999999999999


Q ss_pred             HHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          185 MNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      ++++||.+.+...     .++.+.+..+............+|++.++......++..+..+.+.+++.+.++++.+....
T Consensus       186 ~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        186 YRAAFGSSSNEGQ-----DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             HhHhhcCcccchH-----HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999998765321     44556665555444433344556665443222234556666777888888888777653211


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCC---------CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHH
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGE---------DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRK  335 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~  335 (472)
                      ............|+++.+++......         ....++++++.+++.++++||+|||+.+++|++++|++||++|+|
T Consensus       261 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~k  340 (516)
T PLN02183        261 QNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKR  340 (516)
T ss_pred             cccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHH
Confidence            10000001134689999998653211         123589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCC
Q 048742          336 VQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQ  415 (472)
Q Consensus       336 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  415 (472)
                      +++|++++++.++.++++++++||||+|||+||||++|+++.. .|.+.+|++++||.|||||.|.++.+++||||++|+
T Consensus       341 l~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~  419 (516)
T PLN02183        341 VQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWE  419 (516)
T ss_pred             HHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccC
Confidence            9999999988666789999999999999999999999999997 488999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          416 NPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       416 ~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||++|+||||++++.+ ....+...|+|||+|+|.|+|++||++|+++++|+++++|
T Consensus       420 dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f  475 (516)
T PLN02183        420 DPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCF  475 (516)
T ss_pred             CccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHhee
Confidence            9999999999975421 1122456899999999999999999999999999999987


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=7.5e-77  Score=573.09  Aligned_cols=435  Identities=42%  Similarity=0.780  Sum_probs=354.4

Q ss_pred             CCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      ++.+.||||.++|++||++.+..+++.++.++.++||++|+++++++++++++||+.+++++.+....|..++.......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            34567899999999999988877899999999999999999999999999999999999999987777777654332222


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh-cCCccchHHHHHHHHHHHHHHHHh
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK-VGSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                      ....+.+.+++.+|+.|+++|+.+.+++|+..+++.+ +.+.+.++++++.+... .++++|+.+++..+++|+|+.++|
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHh
Confidence            2222346677778999999999998448999999988 99999999999999753 356799999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhc
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQIS  269 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  269 (472)
                      |.++...+......++.+.+..+............+|++.++...+..++..+..+.+.+++.+.++++++....     
T Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-----  265 (517)
T PLN02687        191 GRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-----  265 (517)
T ss_pred             CccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence            998754322211155666666665544433233456655544333233455566677888888888887654311     


Q ss_pred             ccccccccHHHHHHHHhhcC---CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC
Q 048742          270 KQNEENKDFLHFLLELKQQG---EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN  346 (472)
Q Consensus       270 ~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  346 (472)
                       ......|+++.+++..+..   .++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       266 -~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        266 -GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             -cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence             0123569999999875431   123469999999999999999999999999999999999999999999999999887


Q ss_pred             CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccc
Q 048742          347 GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFL  426 (472)
Q Consensus       347 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l  426 (472)
                      ++.++.+++++||||+|||+|+||++|+++..++|++.+|++++||.||+||.|.++.+++||||++|+||++|+||||+
T Consensus       345 ~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl  424 (517)
T PLN02687        345 DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFL  424 (517)
T ss_pred             CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcC
Confidence            77789999999999999999999999999987789999999999999999999999999999999999999999999999


Q ss_pred             cccCCc--cccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          427 KELGKL--EYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       427 ~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +.+...  .....+..|+|||+|+|.|+|++||++|+++++++||++|
T Consensus       425 ~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f  472 (517)
T PLN02687        425 PGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAF  472 (517)
T ss_pred             CCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence            753211  1122456799999999999999999999999999999987


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.9e-76  Score=565.37  Aligned_cols=432  Identities=37%  Similarity=0.711  Sum_probs=351.5

Q ss_pred             CCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      .+.+.||||+++|++|+++.+..+++.++.+++++||+||+++++++++|+|+||+++++++.+....|+.++.......
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            55678999999999999988776789999999999999999999999999999999999999988777877764432222


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHHH
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMNML  188 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~  188 (472)
                      ...+..+.+++.+|+.|+++|+.+++.+|+..+++.+ +.+.+.+..+++.+...  .++.+|+.+++..+++|+|+.++
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~  187 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI  187 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence            2334445677888999999999998768999999988 88888888888888653  26789999999999999999999


Q ss_pred             hcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhh
Q 048742          189 WGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQI  268 (472)
Q Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  268 (472)
                      ||.++........ .++.+.+...........+...+|++.++......+...+..+.+.+++.+.++++++....    
T Consensus       188 fg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----  262 (504)
T PLN00110        188 LSRRVFETKGSES-NEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE----  262 (504)
T ss_pred             hCCcccccCchhH-HHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Confidence            9998732212222 55667666665544433334556665544333334455556677777788888776543210    


Q ss_pred             cccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCc
Q 048742          269 SKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGS  348 (472)
Q Consensus       269 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  348 (472)
                       .  ....|+++.+++..+. .++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++++.
T Consensus       263 -~--~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  338 (504)
T PLN00110        263 -R--KGNPDFLDVVMANQEN-STGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNR  338 (504)
T ss_pred             -c--ccCCChhhHHhhcccc-cCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence             0  2346899999975432 12456999999999999999999999999999999999999999999999999988777


Q ss_pred             ceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccc
Q 048742          349 IVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKE  428 (472)
Q Consensus       349 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~  428 (472)
                      .++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||++.
T Consensus       339 ~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~  418 (504)
T PLN00110        339 RLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSE  418 (504)
T ss_pred             CCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCC
Confidence            78999999999999999999999999998778999999999999999999999999999999999999999999999964


Q ss_pred             cCCc-cccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          429 LGKL-EYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       429 ~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +... ...+....|+|||+|+|.|+|++||++|+++++++|+++|
T Consensus       419 ~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f  463 (504)
T PLN00110        419 KNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSF  463 (504)
T ss_pred             CCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            3211 1112235799999999999999999999999999999987


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.5e-76  Score=569.73  Aligned_cols=454  Identities=35%  Similarity=0.660  Sum_probs=359.2

Q ss_pred             HHHHHHHHHHHHHHHhhcC-CCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHH
Q 048742           13 VIATMSVAIIAVSWLIKKS-RTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQ   91 (472)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~-~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~   91 (472)
                      .++++++.+++..++.++. ++.+.||||+++|++||+..+..+++.++.+++++||++|++++++.++++++||+.+++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~   88 (514)
T PLN03112          9 LFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIRE   88 (514)
T ss_pred             HHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHH
Confidence            3333333344444444433 456789999999999999988777899999999999999999999999999999999999


Q ss_pred             HHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCC
Q 048742           92 ILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGS  168 (472)
Q Consensus        92 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~  168 (472)
                      ++.++...|+.++.........++....++..+|++|+++|+.+.+++|+..+++.+ +.+.+.++.+++.+...  .++
T Consensus        89 vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~  168 (514)
T PLN03112         89 ILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGK  168 (514)
T ss_pred             HHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Confidence            998877778766544322222334445566778999999999977668999999998 99999999999887653  256


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcCCCCCCcc---cchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHH
Q 048742          169 PINLGEQMFLAILNVVMNMLWGSSLHGEER---SSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVL  245 (472)
Q Consensus       169 ~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~  245 (472)
                      .+|+.+.+..+++++++.++||.++.....   ... .++...+..+........+...+|.+.++...+..++..+..+
T Consensus       169 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  247 (514)
T PLN03112        169 PVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEA-MEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEK  247 (514)
T ss_pred             eeeHHHHHHHHHHHHHHHHHcCCccccccccchHHH-HHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHH
Confidence            799999999999999999999998743321   122 4566666665544433333445665544433333455666677


Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHH
Q 048742          246 WFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAE  325 (472)
Q Consensus       246 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~  325 (472)
                      .+.+++.+.++++++.....    .......|+++.++++..+. .+..++++++.+++..+++||+|||+++++|++++
T Consensus       248 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~  322 (514)
T PLN03112        248 RVDEFHDKIIDEHRRARSGK----LPGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAE  322 (514)
T ss_pred             HHHHHHHHHHHHHHHhhccc----ccCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence            78888888887766542111    00123469999999865332 13358999999999999999999999999999999


Q ss_pred             HhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeee
Q 048742          326 MLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVW  405 (472)
Q Consensus       326 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~  405 (472)
                      |++||++|+|+++|+++++++++.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++.+
T Consensus       323 L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~  402 (514)
T PLN03112        323 VIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTH  402 (514)
T ss_pred             HHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehH
Confidence            99999999999999999988777789999999999999999999999999987689999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCccccccCCc-c-ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          406 SMHRDPEAWQNPLEFHPERFLKELGKL-E-YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       406 ~~~~d~~~~~~p~~f~p~R~l~~~~~~-~-~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++||||++|+||++||||||...++.. . .......|+|||+|+|.|+|++||++|+++++++||++|
T Consensus       403 ~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f  471 (514)
T PLN03112        403 GLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCF  471 (514)
T ss_pred             HhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhe
Confidence            999999999999999999987543211 1 112345799999999999999999999999999999987


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.7e-75  Score=560.87  Aligned_cols=432  Identities=32%  Similarity=0.584  Sum_probs=333.0

Q ss_pred             CCCCCCCCCCCCccccccccCCCC-hhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPD-FHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ++.+.||||+++|++|+++.+..+ .+..+.+++++||+||+++++++++|+|+||+.+++++.++...+..++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            556789999999999999887554 5788999999999999999999999999999999999988766676554332222


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc---CCccchHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV---GSPINLGEQMFLAILNVVMN  186 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~---~~~~d~~~~~~~~~~~~i~~  186 (472)
                      .....+.+.++..+|++|+++|+.+..++|+..+++.+ +.++++++++++.+.+..   ++.+++.+.+..+++|++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            22111235566778999999999997559999889888 999999999999987642   34689999999999999999


Q ss_pred             HHhcCCCCCCcccchhHHHHHHHHHHHHHhCC--CcccchhhhcccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHhH
Q 048742          187 MLWGSSLHGEERSSVGVEFRQVVGEIVEMLGK--PNISDLFPTLAWLDLQGIESKTKKLVLWFDR-IFDSVIVQRMKIDA  263 (472)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~  263 (472)
                      ++||.+++..+.+.. .++.....+.......  ..+...+|++.+. .....+..........+ +....++++++...
T Consensus       187 ~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (503)
T PLN02394        187 MMFDRRFESEDDPLF-LKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDERKKLMS  264 (503)
T ss_pred             HHhCCCcccccchhH-HHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999875443333 3333333333222211  1122334433221 11111122222222222 22334555544321


Q ss_pred             hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                      .++   .......|+++.|+++...    ..++++++..++.++++||+|||+++++|++++|++||++|+||++|++++
T Consensus       265 ~~~---~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        265 AKG---MDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             hcc---CCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            110   0012346899999986542    348999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCC
Q 048742          344 VGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPE  423 (472)
Q Consensus       344 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  423 (472)
                      ++++..++++++++||||+|||+|+||++|+++...+|.+.+|++++||.||+||.|.++.|++||||++|+||++|+||
T Consensus       338 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~Pe  417 (503)
T PLN02394        338 LGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE  417 (503)
T ss_pred             hCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcc
Confidence            98766789999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||+++++..........|+|||+|+|.|+|++||++|+++++++++++|
T Consensus       418 Rwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f  466 (503)
T PLN02394        418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNF  466 (503)
T ss_pred             ccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence            9997543222222456799999999999999999999999999999987


No 10 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4e-75  Score=559.63  Aligned_cols=432  Identities=32%  Similarity=0.621  Sum_probs=340.2

Q ss_pred             cCCCCCCCCCCCCCccccccccCC-CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           30 KSRTPPLPPGPLGLPVLGNLLSIE-PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        30 ~~~~~~~ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      ..+..+.||||.++|++||++.+. .+++.++.+++++||++|++++++.++++|+||+.+++|+.+....|..++....
T Consensus        24 ~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         24 KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            334557899999999999999874 4689999999999999999999999999999999999999887666665543222


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~  185 (472)
                      ......+.....+..+|+.|+++|+.+..++|+..+++.+ +.+.+.++++++.+...  .++.+|+.+.+..+++|+|+
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence            2222233334445667999999999845459999999988 99999999999999753  25679999999999999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLD-LQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      .++||.+++.... .. .++.+.+...........+..++|.+..+. +.+..+......+...+++.+.++++..... 
T Consensus       184 ~~~fG~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  260 (502)
T PLN02966        184 RQAFGKKYNEDGE-EM-KRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR-  260 (502)
T ss_pred             HHHhCCccCccch-HH-HHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            9999998865432 22 455555555444444333344455432211 1122222333445566666666665443210 


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                          ..  ....|+++.+++..++...+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       261 ----~~--~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  334 (502)
T PLN02966        261 ----VK--PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYM  334 (502)
T ss_pred             ----cc--cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                00  234689999998765432234589999999999999999999999999999999999999999999999998


Q ss_pred             cCC--cceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCC-CCCCCCC
Q 048742          345 GNG--SIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFH  421 (472)
Q Consensus       345 ~~~--~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~  421 (472)
                      +++  ..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++| |||++|+
T Consensus       335 ~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~  414 (502)
T PLN02966        335 KEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFR  414 (502)
T ss_pred             cccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCC
Confidence            743  3578999999999999999999999999987789999999999999999999999999999999999 9999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||++++.+  ....+..|+|||+|+|.|+|++||++|+++++|.||++|
T Consensus       415 PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f  463 (502)
T PLN02966        415 PERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNF  463 (502)
T ss_pred             hhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999975322  122456799999999999999999999999999999987


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.3e-74  Score=552.01  Aligned_cols=419  Identities=23%  Similarity=0.384  Sum_probs=330.5

Q ss_pred             CCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           31 SRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        31 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      +...+.+|||+++|++||+..+..+++..+.+++++||++|++++++.++++++||+.+++++.++...|..++......
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            35567889999999999999887789999999999999999999999999999999999999988766666554332211


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      ...+ + ..++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++.+++.+.+.  .++.+|+.+++..+++|+++.+
T Consensus       105 ~~~~-~-~~l~~~~g~~w~~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        105 HGTF-Y-HGIVTSSGEYWKRNREIVGK-AMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             eecc-C-CceeccChHHHHHHHHHHHH-HHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            1112 2 33556789999999999988 8899999999 99999999999998753  3567999999999999999999


Q ss_pred             HhcCCCCCCcc---cchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          188 LWGSSLHGEER---SSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       188 ~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      +||.++...+.   +.. ..+.+.+..++.......+...++++..... ...+...+..+.+.+++.+.++++++..  
T Consensus       182 ~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~--  257 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKL-AELMGPMEQVFKDLGSGSLFDVIEITQPLYY-QYLEHTDKNFKKIKKFIKEKYHEHLKTI--  257 (482)
T ss_pred             HhccccccccccchhHH-HHHHHHHHHHHHHhCCCchhhhhhHhhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHcc--
Confidence            99998764321   111 3455555555544332222222222221111 1112222334455555555554443321  


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                          +.  ....|+++.++++...   ......+++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       258 ----~~--~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~  328 (482)
T PTZ00404        258 ----DP--EVPRDLLDLLIKEYGT---NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTV  328 (482)
T ss_pred             ----CC--CCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHh
Confidence                11  2356999999986532   11122345889999999999999999999999999999999999999999999


Q ss_pred             cCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc-cCeecCCCCEEEEeeecccCCCCCCCCCCCCCCC
Q 048742          345 GNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV-GGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPE  423 (472)
Q Consensus       345 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  423 (472)
                      +++..++++++++||||+|||+||||+||+++..++|.+.+|+++ +||.|||||.|.++.+++||||++||||++||||
T Consensus       329 ~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~Pe  408 (482)
T PTZ00404        329 NGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPS  408 (482)
T ss_pred             cCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcc
Confidence            876678999999999999999999999999997668999999999 9999999999999999999999999999999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||+++.       .+..|+|||+|+|.|+|++||++|+++++++|+++|
T Consensus       409 Rwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f  450 (482)
T PTZ00404        409 RFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNF  450 (482)
T ss_pred             ccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence            999642       345799999999999999999999999999999987


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.5e-73  Score=548.91  Aligned_cols=437  Identities=29%  Similarity=0.493  Sum_probs=337.3

Q ss_pred             CCCCCCCCCCCCccccccccCC---CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIE---PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      +..+.||||+++|++||+..+.   .+++..+.+++++||++|++++++.++++|+||+.+++++.+....|+.++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            4567899999999999987653   3578899999999999999999999999999999999999988777877654332


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc--CCccchHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV--GSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~~i~  185 (472)
                      ....+.+.....+..+|+.|+++||.+..++|+..+++.+ +.+.+.++.+++.+.+..  ++.+|+.+.+..++.++++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence            1122211112222368999999987544449999999999 999999999999997643  3468999999999999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhC-CCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLG-KPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      .++||.+++...   . ..+......+..... ...+...+|.+.+.......++..+..+.+.+++.++++++++....
T Consensus       192 ~~~fG~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (519)
T PLN00168        192 LMCFGERLDEPA---V-RAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNH  267 (519)
T ss_pred             HHHcCCCcChhh---H-HHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999875321   1 233333333322221 22233445543322111112344456678888888888877653211


Q ss_pred             hhh-hccc---ccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 048742          265 KGQ-ISKQ---NEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQEL  340 (472)
Q Consensus       265 ~~~-~~~~---~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  340 (472)
                      ... ....   .....|+++.|++.....+.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       268 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei  347 (519)
T PLN00168        268 LGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI  347 (519)
T ss_pred             ccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            000 0000   012468999999765432224569999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCC-cceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCC
Q 048742          341 DEVVGNG-SIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLE  419 (472)
Q Consensus       341 ~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  419 (472)
                      +++++++ +.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       348 ~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~  427 (519)
T PLN00168        348 KAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPME  427 (519)
T ss_pred             HHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccc
Confidence            9998753 568999999999999999999999999998878999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCc---cccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          420 FHPERFLKELGKL---EYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       420 f~p~R~l~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||||++.....   .....+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       428 F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f  483 (519)
T PLN00168        428 FVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREF  483 (519)
T ss_pred             cCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHc
Confidence            9999999742110   0112345799999999999999999999999999999987


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.8e-73  Score=541.15  Aligned_cols=423  Identities=29%  Similarity=0.519  Sum_probs=332.1

Q ss_pred             CCCCCCCCCCCccccccccCCC---ChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchh
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEP---DFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASA  109 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~  109 (472)
                      ....||||.++|++|++..+.+   +...++.++..+||++|+.|+++.++++++||+.+++|+.+..+.......+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5567899999999999998743   4677889999999999999999999999999999999997655444444444433


Q ss_pred             hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-CCccchHHHHHHHHHHHHHHH
Q 048742          110 LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-GSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      .....| .++++. +|+.|+++||++++ +|+...++.+ ..+.+.+..++..+.... ++.+|+.+.+.++++|+|+.+
T Consensus       113 ~~~~lG-~gll~~-~g~~W~~~Rk~~~~-~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LKPWLG-DGLLFS-DGEKWHKHRKLLTP-AFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHhc-CccccC-CchHHHHHHhhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            334444 355544 59999999999998 9998888888 777777777777766543 333999999999999999999


Q ss_pred             HhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhh-hcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 048742          188 LWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFP-TLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKG  266 (472)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  266 (472)
                      ++|......+.+.. .++.+++.........   ....| +..++...+..++..++.+.++++++++|++|++.....+
T Consensus       190 ~~G~~~~~~~~~~~-~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  190 AMGPESLDAEGPEL-FEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             hcCCccccccCCcc-cHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99933322222232 4566666554443331   11233 3222222235677888999999999999999998764332


Q ss_pred             hhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC
Q 048742          267 QISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN  346 (472)
Q Consensus       267 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  346 (472)
                      ..+  .....|+++.+....     ...+++++|++++.+|++||+||||++++|++++|+.||++|+|+++|+++++++
T Consensus       266 ~~~--~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  266 SGE--EKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             Ccc--cchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            111  134567777633222     1469999999999999999999999999999999999999999999999999875


Q ss_pred             Ccce-ecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc-cCeecCCCCEEEEeeecccCCCCCCC-CCCCCCCC
Q 048742          347 GSIV-EESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV-GGYTIPKGSRVFVNVWSMHRDPEAWQ-NPLEFHPE  423 (472)
Q Consensus       347 ~~~~-~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~f~p~  423 (472)
                      +... +....++|+||++||+||||||||+|+. .|.+.+|+++ +||.||||+.|.++++++||||++|+ ||++||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence            4322 2222336999999999999999999998 5999999999 58999999999999999999999996 99999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||++++...  ..++++|+|||+|+|.|+|++||++|+|++++++|++|
T Consensus       418 Rf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f  464 (497)
T KOG0157|consen  418 RFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRF  464 (497)
T ss_pred             ccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHhe
Confidence            999753221  33578999999999999999999999999999999997


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.2e-73  Score=539.37  Aligned_cols=419  Identities=27%  Similarity=0.476  Sum_probs=334.3

Q ss_pred             CCCCCCCccccccccCC-CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccC
Q 048742           37 PPGPLGLPVLGNLLSIE-PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYG  115 (472)
Q Consensus        37 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~  115 (472)
                      ||||+++|++||++.+. .+++.++.+++++||++|+++++++++++|+||+.+++|+.++...|+.++..........+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885 55899999999999999999999999999999999999999888788776543322212211


Q ss_pred             CcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh----cCCccchHHHHHHHHHHHHHHHHhc
Q 048742          116 LHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK----VGSPINLGEQMFLAILNVVMNMLWG  190 (472)
Q Consensus       116 ~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~----~~~~~d~~~~~~~~~~~~i~~~~fG  190 (472)
                      ...+.+..+|+.|+++|+.+.+++++...++.+ +.+.+.++.+++.+...    .++.+|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            222333446999999999888878888788877 88888888888887543    2567999999999999999999999


Q ss_pred             CCCCCCcccchh------HHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          191 SSLHGEERSSVG------VEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       191 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      .+++....+...      ..+...+...........+.+.+|.+.++......+...+......+++...++++++....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            987654322221      12333344444444333344567766555433333333333344556777777766653211


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                           .  ....|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|+++++
T Consensus       241 -----~--~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        241 -----G--EERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             -----C--CCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence                 0  23458999999753      2489999999999999999999999999999999999999999999999998


Q ss_pred             cCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCc
Q 048742          345 GNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPER  424 (472)
Q Consensus       345 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R  424 (472)
                      +++. ++++++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       308 ~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        308 GDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             CCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence            8654 899999999999999999999999999987899999999999999999999999999999999999999999999


Q ss_pred             cccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          425 FLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       425 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |++.++..   .....++|||+|+|.|||++||+.|+++++++||++|
T Consensus       387 ~~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f  431 (466)
T PLN02655        387 FLGEKYES---ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEF  431 (466)
T ss_pred             cCCCCccc---CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHe
Confidence            99754221   1246799999999999999999999999999999987


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.9e-73  Score=544.71  Aligned_cols=410  Identities=21%  Similarity=0.325  Sum_probs=318.2

Q ss_pred             CCCCCCCCCCCCccccccccCC-----CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCc
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIE-----PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPP  106 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~  106 (472)
                      ++.+.||||+++|++||++.+.     +.++.++.++.++||++|+++++++++|+|+||+++++++.+++..|..+...
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            4456899999999999976532     35678899999999999999999999999999999999999876666533211


Q ss_pred             chhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccch-h-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH
Q 048742          107 ASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDD-C-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVV  184 (472)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~-~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i  184 (472)
                      ..  ....+..+ ++..+|+.|+++|+.+++ .|+..+++. + +.+.+.+..+++.+..  ++.+|+.+.+..++++++
T Consensus       115 ~~--~~~~g~~~-~~~~~g~~wr~~Rk~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~vi  188 (490)
T PLN02500        115 SI--GGILGKWS-MLVLVGDMHRDMRSISLN-FLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNLM  188 (490)
T ss_pred             HH--HHHhCccc-ccccCCHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHHH
Confidence            11  11123223 445689999999999987 888887776 3 6677777777776643  567999999999999999


Q ss_pred             HHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          185 MNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      ++++||.+.+..+   . .++...+.++......  ....+|...       .++..+..+.+.+++.+.++++++....
T Consensus       189 ~~~~fg~~~~~~~---~-~~~~~~~~~~~~~~~~--~~~~~p~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~  255 (490)
T PLN02500        189 AKHIMSMDPGEEE---T-EQLKKEYVTFMKGVVS--APLNFPGTA-------YRKALKSRATILKFIERKMEERIEKLKE  255 (490)
T ss_pred             HHHHhCCCCCchH---H-HHHHHHHHHHHhhhhc--chhcCCCcc-------cHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999998754321   1 2333333333222111  001122211       1344456677888888888877654321


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                      .    +......|+++.+++.       ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       256 ~----~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~  324 (490)
T PLN02500        256 E----DESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIA  324 (490)
T ss_pred             c----cCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Confidence            1    0002346899999863       2489999999999999999999999999999999999999999999999886


Q ss_pred             c-----CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCC
Q 048742          345 G-----NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLE  419 (472)
Q Consensus       345 ~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  419 (472)
                      +     ++..++++|+++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|+++.|++||||++|+||++
T Consensus       325 ~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~  403 (490)
T PLN02500        325 RAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQL  403 (490)
T ss_pred             hccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccc
Confidence            3     234589999999999999999999999999986 6999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCccc----cCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          420 FHPERFLKELGKLEY----QGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       420 f~p~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||||+++++....    ...+..|+|||+|+|.|+|++||++|+++++++||++|
T Consensus       404 F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f  460 (490)
T PLN02500        404 FNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNF  460 (490)
T ss_pred             cChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhcc
Confidence            999999975432110    12456799999999999999999999999999999987


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=7.1e-73  Score=546.93  Aligned_cols=418  Identities=22%  Similarity=0.375  Sum_probs=326.3

Q ss_pred             CCCCCCCCCCCccccccccCCC-------------------ChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHH
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEP-------------------DFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQIL   93 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~   93 (472)
                      ..+.||||+++|++||++.+..                   +....+.+|+++||++|++++++.++++|+||+.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            4567999999999999877632                   223356889999999999999999999999999999999


Q ss_pred             HhccccccCCCCcchh-hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc--C-C
Q 048742           94 KDQDAIFANRDPPASA-LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV--G-S  168 (472)
Q Consensus        94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~--~-~  168 (472)
                      .++. .+..++..... .....| .+ ++..+|+.|+++|+.+++ .|+..+++.+ +.+.+.++++++.+....  + +
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g-~~-l~~~~g~~Wk~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIG-RG-LLMANGADWYHQRHIAAP-AFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhc-CC-ccccCchHHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            8763 33333321111 111123 33 456789999999999987 8998889888 999999999999997642  3 4


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHH
Q 048742          169 PINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFD  248 (472)
Q Consensus       169 ~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~  248 (472)
                      .+|+.+++..+++|++++++||.+++..      .++...++.+............+|++.+++ .+..+......+.+.
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~  268 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKG------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVE  268 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccc------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHH
Confidence            7899999999999999999999987532      222233333222211111111234333222 122344556667788


Q ss_pred             HHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcC-CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHh
Q 048742          249 RIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQG-EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEML  327 (472)
Q Consensus       249 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~  327 (472)
                      +++.+.++++++......    ......|+++.++++.... .++..++++++.+++.++++||+|||+++++|++++|+
T Consensus       269 ~~~~~~i~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~  344 (516)
T PLN02290        269 RLLMEIIQSRRDCVEIGR----SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLA  344 (516)
T ss_pred             HHHHHHHHHHHHHhhccc----CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            888888888765432110    0123469999999765422 12335889999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecc
Q 048742          328 QHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSM  407 (472)
Q Consensus       328 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~  407 (472)
                      +||++|+|+++|++++++++ .++++++++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|.++.+++
T Consensus       345 ~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        345 SNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             cCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEECCCCEEEecHHHh
Confidence            99999999999999998765 789999999999999999999999999974 8999999999999999999999999999


Q ss_pred             cCCCCCC-CCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          408 HRDPEAW-QNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       408 ~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||++| +||++||||||++.+.     .....|+|||.|+|.|+|++||++|+++++++||++|
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f  483 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKF  483 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence            9999999 8999999999995321     1234699999999999999999999999999999987


No 17 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.8e-72  Score=535.73  Aligned_cols=421  Identities=19%  Similarity=0.292  Sum_probs=328.7

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHH
Q 048742           13 VIATMSVAIIAVSWLIKKSRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQI   92 (472)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i   92 (472)
                      +++++.++.++.+|...+.++.+.||||+++|++||++.+.+++..++.+++++||++|+++++++++++|+||+.++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~i   88 (463)
T PLN02774          9 LVIIVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYI   88 (463)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHH
Confidence            33333334444444555556667889999999999998887778889999999999999999999999999999999999


Q ss_pred             HHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccch-h-HHHHHHHHHHHHHHHHhcCCcc
Q 048742           93 LKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDD-C-ALRRAEVREMVKEVYKKVGSPI  170 (472)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~-~-~~~~~~~~~~~~~l~~~~~~~~  170 (472)
                      +.++...+..+.... .. ..+|. +.++..+|+.|+++|+.+.+ +|++..++. + +.+.+.++++++++..  ++++
T Consensus        89 l~~~~~~~~~~~~~~-~~-~~lg~-~~~~~~~g~~w~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v  162 (463)
T PLN02774         89 LMNEGKGLVPGYPQS-ML-DILGT-CNIAAVHGSTHRYMRGSLLS-LISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTI  162 (463)
T ss_pred             HcCCCCeEEecCCHH-HH-HHhCc-cchhhcCCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCE
Confidence            987766654332211 11 12332 33445689999999999987 899888875 5 8888878888777643  4679


Q ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHH
Q 048742          171 NLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRI  250 (472)
Q Consensus       171 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  250 (472)
                      |+.+.+..+++++++.++||.+.....     .++.+.+..+..  ....+...+|.       ...++..++.+.+.++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~lp~-------~~~~~~~~~~~~~~~~  228 (463)
T PLN02774        163 DIQEKTKEMALLSALKQIAGTLSKPIS-----EEFKTEFFKLVL--GTLSLPIDLPG-------TNYRSGVQARKNIVRM  228 (463)
T ss_pred             EeeHHHHHHHHHHHHHHHcCCCChHHH-----HHHHHHHHHHhc--ccccCCcCCCC-------hhhhHHHHHHHHHHHH
Confidence            999999999999999999998643211     222222222211  11111111121       1123455567778888


Q ss_pred             HHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhCh
Q 048742          251 FDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHS  330 (472)
Q Consensus       251 ~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p  330 (472)
                      +.+.++++++..          ....|+++.++.....   +..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       229 ~~~~i~~r~~~~----------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P  295 (463)
T PLN02774        229 LRQLIQERRASG----------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHP  295 (463)
T ss_pred             HHHHHHHHHhcC----------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCH
Confidence            888887765421          2357999999873321   345899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC---CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecc
Q 048742          331 EIMRKVQQELDEVVGN---GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSM  407 (472)
Q Consensus       331 ~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~  407 (472)
                      ++|+|+++|++++++.   +..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+
T Consensus       296 ~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~  374 (463)
T PLN02774        296 KALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREI  374 (463)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHh
Confidence            9999999999998763   34688999999999999999999999999866 6999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          408 HRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       408 ~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||++|+||++|+||||++.+.+     ....|+|||+|+|.|||++||++|++++++.||++|
T Consensus       375 ~rdp~~~~dP~~F~PeRfl~~~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f  434 (463)
T PLN02774        375 NYDPFLYPDPMTFNPWRWLDKSLE-----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRY  434 (463)
T ss_pred             cCCcccCCChhccCchhcCCCCcC-----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999964311     123599999999999999999999999999999987


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4e-71  Score=530.50  Aligned_cols=434  Identities=28%  Similarity=0.475  Sum_probs=326.8

Q ss_pred             CCCCCCCCCCccccccccCCC-Chh-HHHHHHHHhh-CCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           34 PPLPPGPLGLPVLGNLLSIEP-DFH-RYCAKLSRVY-GPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        34 ~~~ppgp~~~p~~G~~~~~~~-~~~-~~~~~~~~~y-g~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      .+.||||+++|++||++.+.. ++. .++.+..++| |+||+++++++++|+|+||+.+++++.++...|+.++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            347899999999999998742 332 4566666666 7999999999999999999999999998877788776443322


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      ....+..++.+..+|+.|+++|+.+++.+++......+ +....+++++++.+.+.  .++++|+.+.+..+++++++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            22222234565656999999999999855555444445 55556788898888753  2457999999999999999999


Q ss_pred             HhcCCCCCCcc-----cchhHHHHHHHHHHHHHhC---CCcccchhh-hcccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 048742          188 LWGSSLHGEER-----SSVGVEFRQVVGEIVEMLG---KPNISDLFP-TLAWLDLQGIESKTKKLVLWFDRIFDSVIVQR  258 (472)
Q Consensus       188 ~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (472)
                      +||.++...+.     ......+............   .....+.+| ++.+....+..++.....+.+.+++.+.++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998754211     1110112222222221111   111112233 33221112223344445566778888888887


Q ss_pred             HHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHH
Q 048742          259 MKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQ  338 (472)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  338 (472)
                      ++.....    .......|+++.+++..+... ...++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       279 ~~~~~~~----~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        279 VELWREK----GGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHhhhc----cCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            6543111    000124699999997654311 12489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          339 ELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       339 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      |++++++.++.++.+++.+||||+|||+|+||++|+++...+|++.+|++++||.||||+.|.++.+++|+||++|+||+
T Consensus       354 Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~  433 (534)
T PLN03018        354 ELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPL  433 (534)
T ss_pred             HHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcc
Confidence            99999987777899999999999999999999999999887899999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCcc---ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLE---YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||||++++++..   ....+..|+|||+|+|.|+|++||.+|+++++++|+++|
T Consensus       434 ~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f  490 (534)
T PLN03018        434 VYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGF  490 (534)
T ss_pred             ccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence            999999997543210   112456799999999999999999999999999999987


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.4e-72  Score=542.06  Aligned_cols=423  Identities=34%  Similarity=0.621  Sum_probs=344.8

Q ss_pred             CCCCCCCccccccccCC--CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh--h
Q 048742           37 PPGPLGLPVLGNLLSIE--PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV--T  112 (472)
Q Consensus        37 ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~--~  112 (472)
                      ||||+++|++||+..+.  +++++++.+++++||+||+++++++++++|+||+.+++|+.++...++.+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999986  6789999999999999999999999999999999999999998766655432222221  1


Q ss_pred             ccCCcceEeCCCChhHHHHHHHHHHHhcccc-ccchh-HHHHHHHHHHHHHHHHhcCC--ccchHHHHHHHHHHHHHHHH
Q 048742          113 SYGLHDIVWMPNGPEWRQLRKVFVREMMSSL-NLDDC-ALRRAEVREMVKEVYKKVGS--PINLGEQMFLAILNVVMNML  188 (472)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~-~l~~~-~~~~~~~~~~~~~l~~~~~~--~~d~~~~~~~~~~~~i~~~~  188 (472)
                      ... ...++..+++.|+.+|+.+.+ .++.. .+ .+ +.+.+.++++++.+....+.  .+|+.+++..+++|+++.++
T Consensus        81 ~~~-~~~l~~~~~~~~~~~R~~~~~-~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFG-GKGLFFSDGERWRRQRRLLAP-AFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHT-TTSSTTSSHHHHHHHHHHHHH-HHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccc-ccccccccccccccccccccc-cccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            222 234456678999999999998 66655 55 67 99999999999999887544  59999999999999999999


Q ss_pred             hcCCCCCCcccchhHHHHHHHHHHHHHhCCC--cccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 048742          189 WGSSLHGEERSSVGVEFRQVVGEIVEMLGKP--NISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKG  266 (472)
Q Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  266 (472)
                      ||.+++..+.+.. .++.+.+..+.......  .+...+|++.++ .....+...+..+.+.+++.+.++++++..... 
T Consensus       158 fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  234 (463)
T PF00067_consen  158 FGKDFGSLDDEDF-EEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDDG-  234 (463)
T ss_dssp             HSSHHHGTTHHHH-HHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-
T ss_pred             ccceeeecccccc-ccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc-
Confidence            9999775544333 45666666665544221  233445544433 233455666677888888888888887755221 


Q ss_pred             hhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC
Q 048742          267 QISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN  346 (472)
Q Consensus       267 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  346 (472)
                           .....|+++.++....+.+.+..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++.++
T Consensus       235 -----~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  309 (463)
T PF00067_consen  235 -----DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD  309 (463)
T ss_dssp             -----SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT
T ss_pred             -----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                 135789999999987211112479999999999999999999999999999999999999999999999999977


Q ss_pred             CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccc
Q 048742          347 GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFL  426 (472)
Q Consensus       347 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l  426 (472)
                      +..++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+|+||+
T Consensus       310 ~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  310 GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77899999999999999999999999999966689999999999999999999999999999999999999999999999


Q ss_pred             cccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          427 KELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       427 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +.++  .....+..|+|||.|+|.|+|++||++|+++++++||++|
T Consensus       390 ~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f  433 (463)
T PF00067_consen  390 DERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRF  433 (463)
T ss_dssp             TTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHE
T ss_pred             cccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhC
Confidence            8754  1123567899999999999999999999999999999987


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.2e-70  Score=530.82  Aligned_cols=451  Identities=20%  Similarity=0.271  Sum_probs=326.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhh---CCeEEEecCCccE
Q 048742            4 VIFEDTVVRVIATMSVAIIAVSWLIKKSRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVY---GPIFKLKLGSKIC   80 (472)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y---g~v~~~~~~~~~~   80 (472)
                      +.++.+...++++.+++++++.+..++    +.+|||+++|++||++.+..+ +..+.+|.++|   |++|+++++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~   77 (516)
T PLN03195          3 FPVSGMSGVLFIALAVLSWIFIHRWSQ----RNRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTY   77 (516)
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHhhc----cccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCc
Confidence            444555555555554444443332222    347899999999998765433 34456777777   7999999999999


Q ss_pred             EEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHH-HHHHHHH
Q 048742           81 IHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALR-RAEVREM  158 (472)
Q Consensus        81 v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~-~~~~~~~  158 (472)
                      ++++||+.+++|+.+....+.....+........+ .+ +++.+|+.|+++|+.+++ .|+..+++.+ +.+ .+.++.+
T Consensus        78 v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g-~~-l~~~~g~~w~~~Rr~l~~-~fs~~~l~~~~~~~~~~~~~~l  154 (516)
T PLN03195         78 TYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLLG-DG-IFNVDGELWRKQRKTASF-EFASKNLRDFSTVVFREYSLKL  154 (516)
T ss_pred             eEecCHHHHHHHHhhCccccCCcHhHHHHHHHHhc-Ce-eeccCcHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998754445433221111111122 33 556789999999999988 8898888888 665 5666777


Q ss_pred             HHHHHHh--cCCccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhc--ccccch
Q 048742          159 VKEVYKK--VGSPINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTL--AWLDLQ  234 (472)
Q Consensus       159 ~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l--~~~~~~  234 (472)
                      ++.+...  .++.+|+.+++..+++|+|+.++||.+++..+.+.....+.+.++........   ....|.+  .+....
T Consensus       155 ~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~  231 (516)
T PLN03195        155 SSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNI  231 (516)
T ss_pred             HHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHH---HHhcchhhHHHhccc
Confidence            7766542  35679999999999999999999999887543221112344433333221110   0011211  111111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccc
Q 048742          235 GIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDT  314 (472)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~t  314 (472)
                      ...+...+..+.+.+++.+.++++++...... . .......|+++.++++.++  ++..++++++.+++.++++||+||
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dT  307 (516)
T PLN03195        232 GSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR-K-SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDT  307 (516)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c-ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHh
Confidence            11233445566777788888877765432110 0 0012356899999975432  134589999999999999999999


Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC--------------------CcceecccCCCCccHHHHHHhhhcCCCC
Q 048742          315 TSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN--------------------GSIVEESHIPKLHFLQSVVKETLRLHPP  374 (472)
Q Consensus       315 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~~~  374 (472)
                      |+++++|++++|++||++|+||++|+++++++                    ++.++++++++||||+|||+||||++|+
T Consensus       308 Ta~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~  387 (516)
T PLN03195        308 TATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPA  387 (516)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCC
Confidence            99999999999999999999999999987642                    2457899999999999999999999999


Q ss_pred             CCCCCCccccccccc-cCeecCCCCEEEEeeecccCCCCCC-CCCCCCCCCccccccCCccccCCccceeecCCCccccc
Q 048742          375 LPLLVPHCPVESCTV-GGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICA  452 (472)
Q Consensus       375 ~~~~~~r~~~~~~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~  452 (472)
                      ++... |.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||++++..  ....+..|+|||+|+|.|+
T Consensus       388 ~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~Ci  464 (516)
T PLN03195        388 VPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICL  464 (516)
T ss_pred             Ccchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCc
Confidence            99985 556666555 9999999999999999999999999 99999999999964311  1124567999999999999


Q ss_pred             ChHHHHHHHHHHHHHHhhcC
Q 048742          453 GISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       453 G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |++||++|++++++.++++|
T Consensus       465 G~~lA~~e~~~~la~ll~~f  484 (516)
T PLN03195        465 GKDSAYLQMKMALALLCRFF  484 (516)
T ss_pred             CHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999987


No 21 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.1e-70  Score=488.39  Aligned_cols=419  Identities=25%  Similarity=0.384  Sum_probs=351.8

Q ss_pred             CCCCCCCCCccccccccC----CCChhHHHHHHHHhhCCeEEEe-cCCccEEEEcCHHHHHHHHHhccccccCCC-Ccc-
Q 048742           35 PLPPGPLGLPVLGNLLSI----EPDFHRYCAKLSRVYGPIFKLK-LGSKICIHISSPSLAKQILKDQDAIFANRD-PPA-  107 (472)
Q Consensus        35 ~~ppgp~~~p~~G~~~~~----~~~~~~~~~~~~~~yg~v~~~~-~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~-~~~-  107 (472)
                      ..+|||+.+|++|.+..+    ..+.|+.....+++||+||+.. +|+...|+|.||++++.++++++. ++.++ ... 
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccch
Confidence            467999999999998843    4678999999999999999999 888999999999999999998753 35553 221 


Q ss_pred             -hhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-----CCccchHHHHHHHH
Q 048742          108 -SALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-----GSPINLGEQMFLAI  180 (472)
Q Consensus       108 -~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-----~~~~d~~~~~~~~~  180 (472)
                       ......++....++..+|++|++.|..+++.++++++++.| +.+++.++++++.+....     ..+.|+.+.+.+++
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence             12233345555677889999999999999999999999999 999999999999987653     24779999999999


Q ss_pred             HHHHHHHHhcCCCCCCcc---cchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 048742          181 LNVVMNMLWGSSLHGEER---SSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQ  257 (472)
Q Consensus       181 ~~~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  257 (472)
                      +++||.++||.+++....   ++. ..|.++++.++......   .+.|.+++....+.+++..+..+.+.++.+..|++
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a-~~fi~ai~~~F~~s~~l---~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEA-QQFIDAIKKMFESSAQL---MLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHH-HHHHHHHHHHHHhHHHH---HhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987543   333 67888888887766543   23454444444556678888888899999999999


Q ss_pred             HHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHH
Q 048742          258 RMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQ  337 (472)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~  337 (472)
                      +.++.+.+....   .+..+.+..++...       .++.+++..++..++.||.||||+++.|+||.|++||++|++|+
T Consensus       285 ~l~~l~~~~~~~---~~~~~~l~~~L~~~-------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  285 ALEELEKQDSAG---SEYTGSLLELLLRK-------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHhccccc---cchhHHHHHHHHHc-------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            988775542210   23344555555432       37889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC-CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCC
Q 048742          338 QELDEVVGN-GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQN  416 (472)
Q Consensus       338 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  416 (472)
                      +|+.++.+. +..++.+++.+||||.||||||+||||.+++. .|+..+|.+++||.|||||.|.++.+...+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999987 57899999999999999999999999999998 5999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          417 PLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       417 p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |++|+|||||+.+.   ...++..++|||.|+|+|+||.||.+|+.+.++.++++|
T Consensus       434 p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f  486 (519)
T KOG0159|consen  434 PEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNF  486 (519)
T ss_pred             ccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhc
Confidence            99999999998752   245788999999999999999999999999999999997


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.4e-70  Score=518.81  Aligned_cols=396  Identities=22%  Similarity=0.375  Sum_probs=319.3

Q ss_pred             CCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ...+.||||+++|++||+..+ .++++.++.+++++||++|+++++++++++|+||+.+++++.++.+.+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            445678899999999998865 5789999999999999999999999999999999999999988766553  2222222


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHh
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                      ....|. ..++..+|+.|+++|+++++ .|+..+++.+ +.+.+.+.++++.+.   ++.+|+.+++..+++++++.++|
T Consensus       110 ~~~~g~-~~l~~~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        110 ERMLGK-QAIFFHQGDYHAKLRKLVLR-AFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHHcCc-ccccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHc
Confidence            222332 34456789999999999998 8998888888 888888888887763   45789999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhc
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQIS  269 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  269 (472)
                      |.+.....     .++.+....+...      ...+|+.  + .....++..++.+.+.+++.+.++++++..       
T Consensus       185 G~~~~~~~-----~~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-------  243 (463)
T PLN02196        185 GKDEVLYR-----EDLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG-------  243 (463)
T ss_pred             CCCCchHH-----HHHHHHHHHHhcc------hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC-------
Confidence            98753211     2222222211110      1112221  1 111124455666777888888887765421       


Q ss_pred             ccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC---
Q 048742          270 KQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN---  346 (472)
Q Consensus       270 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---  346 (472)
                         ....|+++.+++.      +..++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+.   
T Consensus       244 ---~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~  314 (463)
T PLN02196        244 ---SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEE  314 (463)
T ss_pred             ---CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccccc
Confidence               2356899988752      3358999999999999999999999999999999999999999999999988763   


Q ss_pred             CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccc
Q 048742          347 GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFL  426 (472)
Q Consensus       347 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l  426 (472)
                      +..++++++++||||+|||+|+||++|+++... |.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||+
T Consensus       315 ~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl  393 (463)
T PLN02196        315 GESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFE  393 (463)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhc
Confidence            346889999999999999999999999999875 8899999999999999999999999999999999999999999999


Q ss_pred             cccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          427 KELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       427 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +..       .+..++|||+|+|.|+|++||++|+++++++|+++|
T Consensus       394 ~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f  432 (463)
T PLN02196        394 VAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKY  432 (463)
T ss_pred             CCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            631       345799999999999999999999999999999987


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6.4e-70  Score=520.50  Aligned_cols=422  Identities=19%  Similarity=0.344  Sum_probs=312.6

Q ss_pred             CCCCCCCCCCCccccccccCCCC---hhHHHHHHHHhhCCeEE---EecCCccEEEEcCHHHHHHHHHhccccccCCCCc
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEPD---FHRYCAKLSRVYGPIFK---LKLGSKICIHISSPSLAKQILKDQDAIFANRDPP  106 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~~---~~~~~~~~~~~yg~v~~---~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~  106 (472)
                      ..+..|||+++|++||+..+..+   ..+++.+...+||..++   .++++.++++|+||+.+++|+.+....|..+...
T Consensus        29 ~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~  108 (500)
T PLN02169         29 KPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF  108 (500)
T ss_pred             ccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence            34467899999999999776433   33444445555886665   6789999999999999999998876666554322


Q ss_pred             chhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccch--h-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHH
Q 048742          107 ASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDD--C-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAIL  181 (472)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~--~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~  181 (472)
                      ... ....|  ..++..+|+.|+++|+++++ +|+...+..  + +.+.+.++.+++.+.+.  .++.+|+.+.+..+++
T Consensus       109 ~~~-~~~~g--~gl~~~~g~~Wr~~Rk~l~p-~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  184 (500)
T PLN02169        109 KKI-FDVLG--EGILTVDFELWEDLRKSNHA-LFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMF  184 (500)
T ss_pred             HHH-HHhhc--CcccccCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHH
Confidence            211 11122  34556689999999999987 888876653  2 44556667777777643  2567999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhccc----ccchhhhHHHHHHHHHHHHHHHHHHHH
Q 048742          182 NVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAW----LDLQGIESKTKKLVLWFDRIFDSVIVQ  257 (472)
Q Consensus       182 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~  257 (472)
                      |+|++++||.+.+..+.+....++.+.++.......   .....|++.+    +...+..++..+..+.+.+++.+.|++
T Consensus       185 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~  261 (500)
T PLN02169        185 DTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISS  261 (500)
T ss_pred             HHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999987643322111344444443322211   1112232111    111223456777888899999999988


Q ss_pred             HHHHhHhhhhhcccccccccHHHHHHHHhhcC-CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHH
Q 048742          258 RMKIDAAKGQISKQNEENKDFLHFLLELKQQG-EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKV  336 (472)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l  336 (472)
                      |++......   +......|+++.+++..... .....++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       262 r~~~~~~~~---~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl  338 (500)
T PLN02169        262 RRKEEISRA---ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKI  338 (500)
T ss_pred             HHHHhhccc---cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHH
Confidence            865421110   00012468999998764321 11234788999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCcccccccc-ccCeecCCCCEEEEeeecccCCCCCC-
Q 048742          337 QQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCT-VGGYTIPKGSRVFVNVWSMHRDPEAW-  414 (472)
Q Consensus       337 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~-~~g~~ip~G~~v~~~~~~~~~d~~~~-  414 (472)
                      ++|+++++      +++++++||||+|||+||||+||++|... |.+.+|.+ ++|+.|||||.|.++.|++||||++| 
T Consensus       339 ~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~  411 (500)
T PLN02169        339 RHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWG  411 (500)
T ss_pred             HHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccC
Confidence            99998763      67899999999999999999999999986 55555544 59999999999999999999999999 


Q ss_pred             CCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          415 QNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       415 ~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +||++||||||+++++... ...+..|+|||+|+|.|+|++||++|+|+++++||++|
T Consensus       412 ~dP~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f  468 (500)
T PLN02169        412 EDALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNY  468 (500)
T ss_pred             CChhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHC
Confidence            8999999999997543211 11367899999999999999999999999999999987


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.4e-69  Score=512.16  Aligned_cols=408  Identities=21%  Similarity=0.319  Sum_probs=317.4

Q ss_pred             CCCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC
Q 048742           31 SRTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP  105 (472)
Q Consensus        31 ~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~  105 (472)
                      +++.+.||||.++|++||++.+     ..+++.++.++.++||+||+++++++++++++||+++++++.+....+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            3566788999999999999876     34688999999999999999999999999999999999999988776664422


Q ss_pred             cchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh--HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHH
Q 048742          106 PASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC--ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNV  183 (472)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~  183 (472)
                      .. . ...+|. +.++..+|+.|+++|+++.+ .|+...+...  +.+.+.++++++.+..  ++.+|+.+.+..+++++
T Consensus        83 ~~-~-~~l~g~-~~~~~~~g~~wr~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         83 KS-L-TELMGK-SSILLINGSLQRRVHGLIGA-FLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEV  156 (452)
T ss_pred             hh-H-HHHhCc-ccccccCcHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHH
Confidence            11 1 112332 34556689999999999988 7766666542  5555566655555432  56789999999999999


Q ss_pred             HHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          184 VMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      +++++||.+....    . .++.+.+..+......  +...+|..      . ..+..+..+++.+++.+.++++++...
T Consensus       157 i~~~~~G~~~~~~----~-~~~~~~~~~~~~~~~~--~~~~~p~~------~-~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        157 LVKALISLEPGEE----M-EFLKKEFQEFIKGLMS--LPIKLPGT------R-LYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHcCCCchHH----H-HHHHHHHHHHhhhHHh--CccCCCch------H-hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999765321    1 2333333333222111  11111211      1 123445677888899999988775432


Q ss_pred             hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                      ....  .......|+++.++++.     +..++++++.++++.+++||+|||+.+++|++++|++||++|+++++|++++
T Consensus       223 ~~~~--~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~  295 (452)
T PLN03141        223 NKEE--DETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKL  295 (452)
T ss_pred             ccCc--cccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            1100  00012468999998753     2358999999999999999999999999999999999999999999999887


Q ss_pred             hc----CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCC
Q 048742          344 VG----NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLE  419 (472)
Q Consensus       344 ~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  419 (472)
                      .+    .+..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|+||++|+||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~  374 (452)
T PLN03141        296 KRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQ  374 (452)
T ss_pred             HhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccc
Confidence            53    234578899999999999999999999999865 7999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          420 FHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       420 f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||||++.+.      .+..|+|||+|+|.|+|++||++|+++++++|+++|
T Consensus       375 F~PeRfl~~~~------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f  421 (452)
T PLN03141        375 FNPWRWQEKDM------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRF  421 (452)
T ss_pred             cCcccccCCCC------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcC
Confidence            99999997421      345799999999999999999999999999999987


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.3e-68  Score=518.27  Aligned_cols=412  Identities=24%  Similarity=0.426  Sum_probs=309.7

Q ss_pred             cccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCC
Q 048742           47 GNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNG  125 (472)
Q Consensus        47 G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (472)
                      ||+..+ .+.++..+.+++++||+||++++++.++++|+||+.+++|+.+....+..+.... ......+ .+ ++..+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~-~~~~~~g-~~-l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAE-ILEFVMG-KG-LIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHH-HHhhccC-Cc-eecCCc
Confidence            333344 3457788999999999999999999999999999999999987665565442211 1111112 33 456789


Q ss_pred             hhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHHHhcCCCCCCccc-ch
Q 048742          126 PEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMNMLWGSSLHGEERS-SV  201 (472)
Q Consensus       126 ~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~  201 (472)
                      +.|+++|+.+.+ +|+...++.+ +.+.+.++.+++.+...  .++.+|+.+.+..+++|+|+.++||.+++....+ .+
T Consensus       220 e~wr~rRr~l~p-~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        220 EIWRVRRRAIVP-ALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             HHHHHHHHhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            999999999998 8999889888 99999999999999764  3678999999999999999999999998753322 11


Q ss_pred             hHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhh-h--cccccccccH
Q 048742          202 GVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQ-I--SKQNEENKDF  278 (472)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~~d~  278 (472)
                      ...+.+.+...............+|.+..+  ....++..+..+.+.+.+.++++.+++....... .  +.......|+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~di  376 (633)
T PLN02738        299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSI  376 (633)
T ss_pred             HHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchH
Confidence            122223332221111111000112222111  1112334444555666666666554432211100 0  0001234589


Q ss_pred             HHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCC
Q 048742          279 LHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKL  358 (472)
Q Consensus       279 l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l  358 (472)
                      ++.|++..      ..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+++++++ ..++++++++|
T Consensus       377 l~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kL  449 (633)
T PLN02738        377 LHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKL  449 (633)
T ss_pred             HHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccC
Confidence            99998642      248899999999999999999999999999999999999999999999999874 56899999999


Q ss_pred             ccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCc
Q 048742          359 HFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTN  438 (472)
Q Consensus       359 p~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~  438 (472)
                      |||+|||+|+|||||+++.+. |.+.+|++++||.|||||.|.++.|.+||||++||||++|+||||+.++.........
T Consensus       450 PYL~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~  528 (633)
T PLN02738        450 KYTTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQN  528 (633)
T ss_pred             HHHHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCC
Confidence            999999999999999999974 7789999999999999999999999999999999999999999998532111112245


Q ss_pred             cceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          439 FRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       439 ~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ..|+|||.|+|.|+|++||++|+++++++|+++|
T Consensus       529 ~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F  562 (633)
T PLN02738        529 FSYLPFGGGPRKCVGDMFASFENVVATAMLVRRF  562 (633)
T ss_pred             CceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence            6799999999999999999999999999999987


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.7e-68  Score=511.06  Aligned_cols=406  Identities=24%  Similarity=0.376  Sum_probs=319.6

Q ss_pred             CCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCC--eEEEecCCccEEEEcCHHHHHHHHHhccccccCCC
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGP--IFKLKLGSKICIHISSPSLAKQILKDQDAIFANRD  104 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~--v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~  104 (472)
                      ...+.||||+++|++|+++.+     ..+++.++.+++++||+  +|++++++.++++++||+.+++|+.++ +.|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            455789999999999998876     24688899999999996  799999999999999999999999876 3444332


Q ss_pred             CcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhc-cccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHH
Q 048742          105 PPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMM-SSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILN  182 (472)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~-~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~  182 (472)
                      ......  .+|. ..+...+|+.|+++|+.+.+ .| +..+++.+ +.+.+.+.++++.+..  ++.+|+.+.+..++++
T Consensus       118 ~~~~~~--~~g~-~~~~~~~g~~w~~~R~~~~~-~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~  191 (490)
T PLN02302        118 PESTVE--LIGR-KSFVGITGEEHKRLRRLTAA-PVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFK  191 (490)
T ss_pred             chhHHH--Hhcc-ccccccCcHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHH
Confidence            111111  2232 33445689999999999998 55 56778888 9999999999988864  4569999999999999


Q ss_pred             HHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048742          183 VVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKID  262 (472)
Q Consensus       183 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  262 (472)
                      ++++++||.+.....     .++..............  ...+|..      . .++..+..+.+.+++.+.++++++..
T Consensus       192 vi~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~p~~------~-~~~~~~~~~~l~~~~~~~i~~~~~~~  257 (490)
T PLN02302        192 IIMYIFLSSESELVM-----EALEREYTTLNYGVRAM--AINLPGF------A-YHRALKARKKLVALFQSIVDERRNSR  257 (490)
T ss_pred             HHHHHHcCCCChHHH-----HHHHHHHHHHHHHhhhC--CcCCCch------h-hHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999998764221     22222222221111110  0011211      1 12333455677888888888776543


Q ss_pred             HhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 048742          263 AAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDE  342 (472)
Q Consensus       263 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  342 (472)
                      ...   .  .....|+++.+++..++.  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       258 ~~~---~--~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~  330 (490)
T PLN02302        258 KQN---I--SPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEE  330 (490)
T ss_pred             hcc---C--CCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            110   0  124579999999875432  345899999999999999999999999999999999999999999999999


Q ss_pred             hhcCC----cceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          343 VVGNG----SIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       343 ~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      +.+..    ..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       331 v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  409 (490)
T PLN02302        331 IAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPK  409 (490)
T ss_pred             HHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcc
Confidence            87642    1378899999999999999999999999986 588999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||||++..      ..+..++|||+|+|.|+|++||..|+++++++++++|
T Consensus       410 ~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  457 (490)
T PLN02302        410 EFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGY  457 (490)
T ss_pred             ccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcC
Confidence            99999999642      2445799999999999999999999999999999987


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.2e-68  Score=462.30  Aligned_cols=420  Identities=25%  Similarity=0.408  Sum_probs=336.7

Q ss_pred             HhhcCCCCCCCCCCC-CCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC
Q 048742           27 LIKKSRTPPLPPGPL-GLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP  105 (472)
Q Consensus        27 ~~~~~~~~~~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~  105 (472)
                      ..+++++.+.||.-+ ++|++|++..|.++|.+++++..+|||+||++.++|+.+.++.||+....+++++...++....
T Consensus        23 ~~~~r~~~~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~  102 (486)
T KOG0684|consen   23 LLQRRTSRKEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEA  102 (486)
T ss_pred             HHhcccCCCCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHH
Confidence            334443446788554 5799999999999999999999999999999999999999999999999999887544443333


Q ss_pred             cchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHH-HHHhcCCccchHHHHHHHHHHH
Q 048742          106 PASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKE-VYKKVGSPINLGEQMFLAILNV  183 (472)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~-l~~~~~~~~d~~~~~~~~~~~~  183 (472)
                      +.......+| +++....+......+.+.+.. .+...+++.+ +.+.++..+.++. +.. ++....+.+.+...++.+
T Consensus       103 ~~~l~~~vFg-~~v~~d~~~~~~~e~~~~~k~-~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tA  179 (486)
T KOG0684|consen  103 YSKLTTPVFG-KGVVYDVPNHVMMEQKKFFKS-ALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTA  179 (486)
T ss_pred             HHHhhhhhcC-CCccccCCCchHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhh
Confidence            3333334444 445555667777778887777 8888899998 8888888888877 333 466677888888888888


Q ss_pred             HHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          184 VMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      .--+++|......+     .+......++......  +...+|.  +++... .++..++.+++.+.+.+.+.+|++...
T Consensus       180 s~~ll~~e~r~~~d-----~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s  249 (486)
T KOG0684|consen  180 SRLLLGGEVRDQLD-----ADVAKLYHDLDQGFQP--FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASIS  249 (486)
T ss_pred             HHHhhhhhhhhhhc-----chHHHHHHHHhccccc--hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            88888887665532     3444445555443332  3334552  222222 344557888899999999988887541


Q ss_pred             hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                               ....|+++.+++...+   +...+++|+.+..+.++|||++||+.|.+|++++|++|||+++.+++|+.++
T Consensus       250 ---------~~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~v  317 (486)
T KOG0684|consen  250 ---------KWDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRV  317 (486)
T ss_pred             ---------cccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence                     3456899999883333   6679999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcc-eecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccC----eecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          344 VGNGSI-VEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGG----YTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       344 ~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      +|++.. ++++.|++||+|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|++|.+++...|+||++|+||+
T Consensus       318 lG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~  396 (486)
T KOG0684|consen  318 LGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPE  396 (486)
T ss_pred             hhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChh
Confidence            988765 999999999999999999999999988875 99999999955    999999999999999999999999999


Q ss_pred             CCCCCccccccCCccccCC--ccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLEYQGT--NFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~~~~~--~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+|+||++++++....+.  .+.|+|||+|.|.|||++||++|+|+++..+|++|
T Consensus       397 ~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~f  452 (486)
T KOG0684|consen  397 DFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHF  452 (486)
T ss_pred             hCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHc
Confidence            9999999988765433333  34569999999999999999999999999999987


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5.7e-67  Score=495.43  Aligned_cols=403  Identities=23%  Similarity=0.343  Sum_probs=309.3

Q ss_pred             CCCCCCCCCCCCccccccccCC-----CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCc
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIE-----PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPP  106 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~  106 (472)
                      .+.+.||||.++|++||++.+.     .++..++.++.++||++|+++++++++++|+||+.+++++.+....|..+...
T Consensus        27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~  106 (472)
T PLN02987         27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPG  106 (472)
T ss_pred             CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcH
Confidence            3445788999999999998762     46888999999999999999999999999999999999999877767543221


Q ss_pred             chhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh--HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH
Q 048742          107 ASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC--ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVV  184 (472)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i  184 (472)
                        .....+|..+. +..+|+.|+++|+++.+ +++...++.+  ..+.+.++..++.+    .+.+++.+.+..++++++
T Consensus       107 --~~~~~lg~~~l-~~~~g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        107 --SISNLLGKHSL-LLMKGNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             --HHHHHhCcccc-cccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHHH
Confidence              11122233344 45589999999998764 5444444332  11222233333333    356899999999999999


Q ss_pred             HHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          185 MNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      ++++||.+.+...     ..+.+.+.......    ....+|++.     ...++..+..+++.+++.+.++++++....
T Consensus       179 ~~~~fg~~~~~~~-----~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  244 (472)
T PLN02987        179 VKQLMSFDPGEWT-----ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEEE  244 (472)
T ss_pred             HHHHcCCCChHHH-----HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999998753221     22222222221111    111233321     123556667788888999999888654311


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                      .      .....|+++.+++..      ..++++|+.++++++++||+|||+.+++|++++|++||++|+++++|++++.
T Consensus       245 ~------~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~  312 (472)
T PLN02987        245 G------AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIR  312 (472)
T ss_pred             c------CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            0      023569999999652      2489999999999999999999999999999999999999999999999887


Q ss_pred             c---CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCC
Q 048742          345 G---NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFH  421 (472)
Q Consensus       345 ~---~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  421 (472)
                      +   .+..++++++.+||||+||++|+||++|+++.. +|.+.+|++++||.||||+.|.++.+.+|+||++|+||++||
T Consensus       313 ~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~  391 (472)
T PLN02987        313 AMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFN  391 (472)
T ss_pred             cccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccC
Confidence            4   234578899999999999999999999999865 698999999999999999999999999999999999999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||++.++.   ......++|||+|+|.|+|++||+.|++++++.|+++|
T Consensus       392 PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  439 (472)
T PLN02987        392 PWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRF  439 (472)
T ss_pred             cccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhce
Confidence            9999975322   11245799999999999999999999999999999987


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1e-66  Score=498.71  Aligned_cols=422  Identities=25%  Similarity=0.407  Sum_probs=324.4

Q ss_pred             CCCCCCCCccccccccC-----CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           36 LPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        36 ~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      .-.|-.+||++|..+.+     .+.++..+.+++++||+||++++++.++++++||+++++|+.+....|..+..... .
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~-~   91 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV-S   91 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh-h
Confidence            34577889999988775     46688999999999999999999999999999999999999876666665432211 1


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-H-HHHHHHHHHHHHHHHhc--CCccchHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-A-LRRAEVREMVKEVYKKV--GSPINLGEQMFLAILNVVMN  186 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~-~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~~i~~  186 (472)
                      ....+  ..++..+|+.|+++|+.+++ .|+..++..+ + .+.+.++.+++.+.+..  ++++|+.+++..+++++++.
T Consensus        92 ~~~~~--~~i~~~~g~~wk~~Rk~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         92 EFLFG--SGFAIAEGELWTARRRAVVP-SLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HHHhc--CccccCCchHHHHHHHhhcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            11122  33445789999999999998 7887777766 3 67778888999887642  56899999999999999999


Q ss_pred             HHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhccc--cc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          187 MLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAW--LD-LQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      ++||.+++..+.+   .++.+.+......... .....+|.+.+  +. ..+..++..+..+.+.+++.+.+++++....
T Consensus       169 ~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~  244 (489)
T PLN02936        169 SVFNYNFDSLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVE  244 (489)
T ss_pred             HHcCCCccccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998764322   2233333332222111 11112332211  00 1112345566677788888888877665432


Q ss_pred             hhhhhc--c--cccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHH
Q 048742          264 AKGQIS--K--QNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQE  339 (472)
Q Consensus       264 ~~~~~~--~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  339 (472)
                      .+....  +  ......|+++.|+...+      .++++++.++++++++||+|||+++++|++++|++||++|+++++|
T Consensus       245 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~E  318 (489)
T PLN02936        245 AEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEE  318 (489)
T ss_pred             hcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            111100  0  01234689999986432      3889999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCC
Q 048742          340 LDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLE  419 (472)
Q Consensus       340 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  419 (472)
                      ++++++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++||.||+|+.|+++.+++||||++|+||++
T Consensus       319 i~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  397 (489)
T PLN02936        319 LDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEE  397 (489)
T ss_pred             HHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccc
Confidence            9999875 357889999999999999999999999999887877788888999999999999999999999999999999


Q ss_pred             CCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          420 FHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       420 f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||||+.+++.......+..|+|||.|+|.|+|++||++|+++++++|+++|
T Consensus       398 F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f  450 (489)
T PLN02936        398 FVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRL  450 (489)
T ss_pred             cCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            99999996432111122345799999999999999999999999999999987


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.4e-65  Score=486.27  Aligned_cols=404  Identities=21%  Similarity=0.299  Sum_probs=309.1

Q ss_pred             CccccccccCCCChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEe
Q 048742           43 LPVLGNLLSIEPDFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVW  121 (472)
Q Consensus        43 ~p~~G~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (472)
                      .++.|++.....+.+.++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.....+........| . .++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~-gi~  124 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-R-GIF  124 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-C-cee
Confidence            56889888766667777777888888 6888877664  89999999999998765556543322211112223 3 456


Q ss_pred             CCCChhHHHHHHHHHHHhccccccchh---HHHHHHHHHHHHHHHHhc----CCccchHHHHHHHHHHHHHHHHhcCCCC
Q 048742          122 MPNGPEWRQLRKVFVREMMSSLNLDDC---ALRRAEVREMVKEVYKKV----GSPINLGEQMFLAILNVVMNMLWGSSLH  194 (472)
Q Consensus       122 ~~~~~~~~~~R~~l~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~~----~~~~d~~~~~~~~~~~~i~~~~fG~~~~  194 (472)
                      +.+|+.|+++||.+.+ .|+..+++.+   +.+.+.++++++.+.+..    ++++|+.+++..+++|+|+.++||.+++
T Consensus       125 ~~~g~~wk~~Rk~l~~-~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        125 NVDGDSWRFQRKMASL-ELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             ecCcHHHHHHHHHhHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            7789999999999987 8888877765   355566667777775432    3579999999999999999999999987


Q ss_pred             CCcccchhHHHHHHHHHHHHHhCCCcccchhhhcc---cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccc
Q 048742          195 GEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLA---WLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQ  271 (472)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  271 (472)
                      ..+.+....++.+.++......... .....|++.   .+...+..++..+..+.+.+++.++++++++..      .  
T Consensus       204 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~------~--  274 (502)
T PLN02426        204 CLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG------F--  274 (502)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc------c--
Confidence            6543211134555554433221100 011112211   111112235566777888888888888876532      0  


Q ss_pred             ccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-cce
Q 048742          272 NEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNG-SIV  350 (472)
Q Consensus       272 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~  350 (472)
                       ....|+++.++++.        .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++.+.+ ..+
T Consensus       275 -~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~  345 (502)
T PLN02426        275 -SASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAA  345 (502)
T ss_pred             -CCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCC
Confidence             23579999998642        25789999999999999999999999999999999999999999999988753 368


Q ss_pred             ecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc-cCeecCCCCEEEEeeecccCCCCCC-CCCCCCCCCccccc
Q 048742          351 EESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV-GGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPERFLKE  428 (472)
Q Consensus       351 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~  428 (472)
                      +++++++||||+|||+|+||++|+++... |.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||+++
T Consensus       346 t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~  424 (502)
T PLN02426        346 SFEEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKN  424 (502)
T ss_pred             CHHHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCC
Confidence            99999999999999999999999999874 888888887 9999999999999999999999999 99999999999973


Q ss_pred             cCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          429 LGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       429 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      + +. ....+..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       425 ~-~~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f  466 (502)
T PLN02426        425 G-VF-VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRF  466 (502)
T ss_pred             C-Cc-CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHc
Confidence            2 11 112456799999999999999999999999999999987


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=7.1e-60  Score=443.18  Aligned_cols=401  Identities=17%  Similarity=0.250  Sum_probs=287.2

Q ss_pred             CCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCC-eEEEecCCccE-------EEEcCHHHHHHHHHh---
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGP-IFKLKLGSKIC-------IHISSPSLAKQILKD---   95 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~-v~~~~~~~~~~-------v~v~dp~~v~~i~~~---   95 (472)
                      .+.+.|||+.++|++|++..+     ..++..++.+..+|||+ ||+++++|.++       ++++||++++.++.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            345679999999999999864     45568999999999998 99999998665       999999999999975   


Q ss_pred             -ccccccCCCCcchhhhhccCCc--ceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCc
Q 048742           96 -QDAIFANRDPPASALVTSYGLH--DIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSP  169 (472)
Q Consensus        96 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~  169 (472)
                       +...+.....  .... .+|..  ..++..+|+.|+++|+++.+ +|+. .++.+ +.+.+.++++++.|...  .+.+
T Consensus        94 ~~~~~~~~~~~--~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~-~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~  168 (480)
T PLN02648         94 DKRDVFTGTYM--PSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFE-LLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGK  168 (480)
T ss_pred             cccccceeeec--cCcc-ccCCceeeeecCCCCchHHHHHHHHHH-HHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence             3333332221  1111 23322  14556789999999999998 8884 66778 99999999999999643  2457


Q ss_pred             cchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHH
Q 048742          170 INLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDR  249 (472)
Q Consensus       170 ~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~  249 (472)
                      +|+.+.+..+++|++++++||.+.+..   .....+......+....       .+|.....               +..
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~---~l~~~~~~~~~~~~~~~-------~~p~~~~~---------------l~~  223 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSET---ALGSDGPALIQKWLALQ-------LAPLASTG---------------LPH  223 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchh---hhccchhHHHHHHHHHH-------hhHHHHcC---------------chH
Confidence            999999999999999999999876541   11122222222221100       01111000               000


Q ss_pred             HHHHHHHHHHHHh--HhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHh-hhcccccchHHHHHHHHHHH
Q 048742          250 IFDSVIVQRMKID--AAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLD-TVLGGTDTTSTTLEWAMAEM  326 (472)
Q Consensus       250 ~~~~~i~~~~~~~--~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~Ag~~tt~~~l~~~l~~L  326 (472)
                      .+++.+.++....  .......+....-.+.+..++....+    .+++++|+.++++. +.+++++|++++++|++|+|
T Consensus       224 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L  299 (480)
T PLN02648        224 VLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWV  299 (480)
T ss_pred             HHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            0111110000000  00000000000001122344433322    24999999998875 45677888889999999999


Q ss_pred             hhChH-HHHHHHHHHHHhhcC-CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCcccccccccc----CeecCCCCEE
Q 048742          327 LQHSE-IMRKVQQELDEVVGN-GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVG----GYTIPKGSRV  400 (472)
Q Consensus       327 ~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~----g~~ip~G~~v  400 (472)
                      ++||+ +|++|++|++++.+. ++.++++++++||||++||+|+||++|+++... |.+.+|++++    ||.||||+.|
T Consensus       300 ~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V  378 (480)
T PLN02648        300 GRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEML  378 (480)
T ss_pred             HcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEE
Confidence            99995 999999999999863 456899999999999999999999999999885 6689999995    7999999999


Q ss_pred             EEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceee---------cCCCcccccChHHHHHHHHHHHHHHhhc
Q 048742          401 FVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLP---------FGSGRRICAGISLAEKMVAYVLATLLHS  471 (472)
Q Consensus       401 ~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~a~~e~~~~l~~ll~~  471 (472)
                      .++.+.+||||++|+||++|||+||++++++.     ...+++         ||+|+|.|+|++||+.|+++++++|+++
T Consensus       379 ~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~-----~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~  453 (480)
T PLN02648        379 FGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK-----LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLR  453 (480)
T ss_pred             EEChHHHhCCcccCCCcceeCCCCCCCCCccc-----cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998643221     122333         4678899999999999999999999998


Q ss_pred             C
Q 048742          472 F  472 (472)
Q Consensus       472 f  472 (472)
                      |
T Consensus       454 f  454 (480)
T PLN02648        454 Y  454 (480)
T ss_pred             h
Confidence            7


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.2e-55  Score=407.33  Aligned_cols=351  Identities=28%  Similarity=0.461  Sum_probs=285.3

Q ss_pred             hhHHHHHHHHhhCCeEEEecCCcc--EEEEcCHHHHHHHHHhccccccCCCCcchh---hhhccCCcceEeCCCChhHHH
Q 048742           56 FHRYCAKLSRVYGPIFKLKLGSKI--CIHISSPSLAKQILKDQDAIFANRDPPASA---LVTSYGLHDIVWMPNGPEWRQ  130 (472)
Q Consensus        56 ~~~~~~~~~~~yg~v~~~~~~~~~--~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  130 (472)
                      +......+.+.||.+++++..+..  +++++++++++++++++. .++........   .....| .+.++..||+.|++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLG-DGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhcc-ccceeecCCHHHHH
Confidence            455566788889999988877655  799999999999999874 11111111111   122233 23255779999999


Q ss_pred             HHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHH
Q 048742          131 LRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVV  209 (472)
Q Consensus       131 ~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  209 (472)
                      +||++++ .|++..++.+ +.+.+.+.++++.+ .. ++.+++.+.+..+++++|+ .+||.+....      ..+....
T Consensus       102 ~Rkl~~~-~F~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~------~~~~~~~  171 (411)
T COG2124         102 LRKLLAP-AFTPRALRGYRPLIREIADRLLDDL-WQ-GGADLVLDFAAELTLRVIA-ELLGVPLEDR------PQLLRWS  171 (411)
T ss_pred             HHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHhc-cc-CCchhHHHHhhhhhHHHHH-HHhCCCHHHH------HHHHHHH
Confidence            9999998 9999999999 99999999999999 43 3678899999999999999 9999987433      2222222


Q ss_pred             HHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcC
Q 048742          210 GEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQG  289 (472)
Q Consensus       210 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  289 (472)
                      ......   ..     |...   ......+..+....+.+++.++|++|+.            ...+|+++.|+.+.+++
T Consensus       172 ~~~~~~---~~-----~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~------------~~~~dlls~l~~a~~~~  228 (411)
T COG2124         172 DALLLR---LD-----PDLG---PEEPWRRARAARRELDAYLRALIAERRA------------APRDDLLSLLLSAEDDG  228 (411)
T ss_pred             HHHHhc---cC-----cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc------------CCcccHHHHHHHHhhCC
Confidence            222111   00     1110   1111345667778899999999988883            57799999999988764


Q ss_pred             CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhh
Q 048742          290 EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETL  369 (472)
Q Consensus       290 ~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  369 (472)
                        +..+|++||.++++++++||+|||+++|+|+++.|++||++++++++|.+.                ||++++|+|+|
T Consensus       229 --~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~L  290 (411)
T COG2124         229 --GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETL  290 (411)
T ss_pred             --CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHH
Confidence              226999999999999999999999999999999999999999999999874                79999999999


Q ss_pred             cCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCcc
Q 048742          370 RLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRR  449 (472)
Q Consensus       370 Rl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r  449 (472)
                      |++||++. ++|.+.+|++++|+.||||+.|.++.+++||||++|++|++|||+||.            +.|+|||+|+|
T Consensus       291 R~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H  357 (411)
T COG2124         291 RLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPH  357 (411)
T ss_pred             HhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCc
Confidence            99999999 689999999999999999999999999999999999999999999988            25999999999


Q ss_pred             cccChHHHHHHHHHHHHHHhhcC
Q 048742          450 ICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       450 ~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .|+|+.||++|++++++.+|++|
T Consensus       358 ~ClG~~lA~~E~~~~l~~ll~r~  380 (411)
T COG2124         358 RCLGAALARLELKVALAELLRRF  380 (411)
T ss_pred             cccCHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999986


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=66.70  E-value=1.2  Score=36.76  Aligned_cols=46  Identities=22%  Similarity=0.319  Sum_probs=34.2

Q ss_pred             CCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEee
Q 048742          357 KLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNV  404 (472)
Q Consensus       357 ~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~  404 (472)
                      .-..+.|||.|+.-+......-+  ...+|+.++|..|||||.|....
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vrl--RLle~i~i~g~~IPkgt~l~G~~   96 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVRL--RLLEDIQIGGILIPKGTYLYGVA   96 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEEE--EEcCceEECCEEeCCCCEEEEEE
Confidence            34567789999987765544322  36788999999999999988743


No 34 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=60.74  E-value=39  Score=30.09  Aligned_cols=66  Identities=12%  Similarity=0.115  Sum_probs=52.5

Q ss_pred             CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccC--CCCccHHHHHHhhh
Q 048742          292 KTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHI--PKLHFLQSVVKETL  369 (472)
Q Consensus       292 ~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l--~~lp~l~a~i~E~l  369 (472)
                      +.+-+.|.|.+++..|-+.|.                +|...+.|.++-.-.+-.++.++...|  ++..|..-.|.|+.
T Consensus       340 ~TPGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde~V  403 (410)
T KOG1412|consen  340 KTPGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDETV  403 (410)
T ss_pred             CCCCcHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHHHH
Confidence            444578899999999988886                567777777766555667788888877  68999999999999


Q ss_pred             cCCC
Q 048742          370 RLHP  373 (472)
Q Consensus       370 Rl~~  373 (472)
                      |-.+
T Consensus       404 r~~~  407 (410)
T KOG1412|consen  404 RAIK  407 (410)
T ss_pred             Hhhc
Confidence            9764


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=60.38  E-value=35  Score=20.73  Aligned_cols=43  Identities=19%  Similarity=0.190  Sum_probs=33.1

Q ss_pred             HHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          299 QIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       299 ~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                      ++...+..++-.|.|-.+..+.--+.+..-||+....+..|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            4566666677778888777777778888889999888888763


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=55.30  E-value=13  Score=23.42  Aligned_cols=23  Identities=13%  Similarity=0.271  Sum_probs=17.7

Q ss_pred             HHHHHHhhChHHHHHHHHHHHHh
Q 048742          321 WAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       321 ~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                      -++.+|.+||++.+++.+.=.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            35789999999999998753333


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=53.70  E-value=5.9  Score=24.34  Aligned_cols=10  Identities=50%  Similarity=1.112  Sum_probs=8.7

Q ss_pred             ecCCCccccc
Q 048742          443 PFGSGRRICA  452 (472)
Q Consensus       443 ~Fg~G~r~C~  452 (472)
                      +||.|+|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            7999999884


No 38 
>PHA03049 IMV membrane protein; Provisional
Probab=52.21  E-value=45  Score=21.59  Aligned_cols=32  Identities=22%  Similarity=0.371  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 048742           10 VVRVIATMSVAIIAVSWLIKKSRTPPLPPGPL   41 (472)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~   41 (472)
                      ++.++.++++.++++-.+.+.+.....||.|.
T Consensus         6 ~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e   37 (68)
T PHA03049          6 ILVIICVVIIGLIVYGIYNKKTTTSQNPPSQE   37 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccCCCCCChh
Confidence            33444444434444433334444444444433


No 39 
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=51.45  E-value=70  Score=29.05  Aligned_cols=59  Identities=8%  Similarity=0.129  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccC--CCCccHHHHHHhh
Q 048742          294 SLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHI--PKLHFLQSVVKET  368 (472)
Q Consensus       294 ~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l--~~lp~l~a~i~E~  368 (472)
                      ..+.+.|..++..|.+.|.                +|+..+++..|-.-.+..++.++.+.+  ++.+||.-.|.++
T Consensus       362 ~~~W~hI~~QIGMF~fTgl----------------~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~v  422 (427)
T KOG1411|consen  362 PGNWSHITKQIGMFCFTGL----------------NPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAV  422 (427)
T ss_pred             CccHHHHHHhhheeeecCC----------------CHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhH
Confidence            3477889999999988886                999999999998777777888888876  6889988777654


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=51.34  E-value=24  Score=26.51  Aligned_cols=23  Identities=17%  Similarity=0.300  Sum_probs=8.0

Q ss_pred             HHHHHHHHHHHHHHHH-HhhcCCC
Q 048742           11 VRVIATMSVAIIAVSW-LIKKSRT   33 (472)
Q Consensus        11 ~~~~~~~~~~~~~~~~-~~~~~~~   33 (472)
                      +.+.++++.+++++.| ++|++++
T Consensus        71 ~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   71 FGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3333333333333333 3444433


No 41 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=47.02  E-value=35  Score=26.59  Aligned_cols=21  Identities=19%  Similarity=0.591  Sum_probs=11.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCC
Q 048742           21 IIAVSWLIKKSRTPPLPPGPL   41 (472)
Q Consensus        21 ~~~~~~~~~~~~~~~~ppgp~   41 (472)
                      +..+.|++.++...+.||-|.
T Consensus       163 VA~L~~~F~RR~~rrsppeps  183 (215)
T PF05084_consen  163 VAMLTWFFLRRTGRRSPPEPS  183 (215)
T ss_pred             HHHHHHHHHHhhccCCCCCCC
Confidence            344445555555566666655


No 42 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=46.79  E-value=1.3e+02  Score=28.82  Aligned_cols=38  Identities=18%  Similarity=0.369  Sum_probs=21.1

Q ss_pred             HhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccC
Q 048742           65 RVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFAN  102 (472)
Q Consensus        65 ~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~  102 (472)
                      -+||.|++-.+.++.+-|=.=|+.-++=+.++.+.|+.
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            36888888777776655533333333334444455543


No 43 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=42.50  E-value=4.4  Score=37.56  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=33.7

Q ss_pred             CccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEe
Q 048742          358 LHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVN  403 (472)
Q Consensus       358 lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~  403 (472)
                      -..+.|||.|+.-+.-....-  -...+|+.++|..||+||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            457788999988887554332  23688999999999999998765


No 44 
>PRK06789 flagellar motor switch protein; Validated
Probab=40.83  E-value=26  Score=23.61  Aligned_cols=41  Identities=10%  Similarity=0.081  Sum_probs=30.5

Q ss_pred             HHHhhhcCCCCCCCCCCccccccc--cccCeecCCCCEEEEee
Q 048742          364 VVKETLRLHPPLPLLVPHCPVESC--TVGGYTIPKGSRVFVNV  404 (472)
Q Consensus       364 ~i~E~lRl~~~~~~~~~r~~~~~~--~~~g~~ip~G~~v~~~~  404 (472)
                      -++|.+.|.+..-.-.-|.+.++.  .++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            378899999876655556665544  45999999999988753


No 45 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=37.93  E-value=14  Score=26.48  Aligned_cols=21  Identities=29%  Similarity=0.548  Sum_probs=16.4

Q ss_pred             cCCccceeecCCCcccccChH
Q 048742          435 QGTNFRYLPFGSGRRICAGIS  455 (472)
Q Consensus       435 ~~~~~~~~~Fg~G~r~C~G~~  455 (472)
                      .+...+.+|||.|.-.|.|..
T Consensus       101 vg~gss~~p~GaGaAaC~aAa  121 (131)
T PF14459_consen  101 VGCGSSNNPFGAGAAACFAAA  121 (131)
T ss_pred             cccCcccCCcCccHHHHHHHH
Confidence            334557899999999999854


No 46 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=36.00  E-value=56  Score=22.75  Aligned_cols=19  Identities=16%  Similarity=0.401  Sum_probs=15.9

Q ss_pred             ChHHHHHHHHHHHHhhcCC
Q 048742          329 HSEIMRKVQQELDEVVGNG  347 (472)
Q Consensus       329 ~p~~~~~l~~Ei~~~~~~~  347 (472)
                      .|++...+|+||-+++.+.
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            3999999999999987653


No 47 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=35.53  E-value=1.2e+02  Score=19.88  Aligned_cols=15  Identities=13%  Similarity=0.350  Sum_probs=5.8

Q ss_pred             HHHHHHHHHHHHHHH
Q 048742           10 VVRVIATMSVAIIAV   24 (472)
Q Consensus        10 ~~~~~~~~~~~~~~~   24 (472)
                      ++.++.++++.++++
T Consensus         6 iLi~ICVaii~lIlY   20 (68)
T PF05961_consen    6 ILIIICVAIIGLILY   20 (68)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            333344333333333


No 48 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=34.77  E-value=1.8e+02  Score=21.23  Aligned_cols=39  Identities=18%  Similarity=0.185  Sum_probs=29.6

Q ss_pred             hHHHHHHHHhhCCeEEEecC------CccEEEEcCHHHHHHHHHh
Q 048742           57 HRYCAKLSRVYGPIFKLKLG------SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        57 ~~~~~~~~~~yg~v~~~~~~------~~~~v~v~dp~~v~~i~~~   95 (472)
                      .+-+-++.-+||.|..+++|      |.-+||-.|-..++..++.
T Consensus        32 seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   32 SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            45667788899999999987      4556777777777776654


No 49 
>PF13268 DUF4059:  Protein of unknown function (DUF4059)
Probab=33.13  E-value=90  Score=20.71  Aligned_cols=29  Identities=21%  Similarity=0.368  Sum_probs=16.8

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 048742            2 FSVIFEDTVVRVIATMSVAIIAVSWLIKK   30 (472)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (472)
                      ||+-+++++.+.+..+++..+...|...+
T Consensus         6 f~lYlqgL~ls~i~V~~~~~~wi~~Ra~~   34 (72)
T PF13268_consen    6 FSLYLQGLLLSSILVLLVSGIWILWRALR   34 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666777776666665555544444333


No 50 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=32.96  E-value=1.5e+02  Score=21.83  Aligned_cols=12  Identities=33%  Similarity=0.362  Sum_probs=8.4

Q ss_pred             CCccccccccCC
Q 048742           42 GLPVLGNLLSIE   53 (472)
Q Consensus        42 ~~p~~G~~~~~~   53 (472)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            368888877653


No 51 
>PF09551 Spore_II_R:  Stage II sporulation protein R (spore_II_R);  InterPro: IPR014202  This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=32.81  E-value=42  Score=25.60  Aligned_cols=16  Identities=25%  Similarity=0.360  Sum_probs=11.8

Q ss_pred             ccccCeecCCCCEEEE
Q 048742          387 CTVGGYTIPKGSRVFV  402 (472)
Q Consensus       387 ~~~~g~~ip~G~~v~~  402 (472)
                      -.++++++|+|..=.+
T Consensus        86 K~YG~~~~PaG~YeAl  101 (130)
T PF09551_consen   86 KTYGDIVLPAGEYEAL  101 (130)
T ss_pred             ceECCEeccCCceEEE
Confidence            3568899999986443


No 52 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=31.73  E-value=1.8e+02  Score=20.28  Aligned_cols=48  Identities=10%  Similarity=0.045  Sum_probs=39.8

Q ss_pred             HHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 048742          297 MTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVV  344 (472)
Q Consensus       297 ~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  344 (472)
                      .+.........++-=++.++....-.+.+.++||+..+++.+.+..-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            445556666778888999999999999999999999999999887654


No 53 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=31.02  E-value=66  Score=25.16  Aligned_cols=41  Identities=17%  Similarity=0.507  Sum_probs=27.4

Q ss_pred             ccccccccCeecCCCCEEEEeee-------cccCCCCCCCCCCCCCCCc
Q 048742          383 PVESCTVGGYTIPKGSRVFVNVW-------SMHRDPEAWQNPLEFHPER  424 (472)
Q Consensus       383 ~~~~~~~~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~f~p~R  424 (472)
                      ..+|+.++|..||||+.-.....       -++++...|.. ..+||+.
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            46788999999999998766543       23455555644 4455543


No 54 
>PHA02902 putative IMV membrane protein; Provisional
Probab=29.15  E-value=1.6e+02  Score=19.02  Aligned_cols=24  Identities=17%  Similarity=0.135  Sum_probs=14.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcC
Q 048742            8 DTVVRVIATMSVAIIAVSWLIKKS   31 (472)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~   31 (472)
                      .+.+.+++.+++.+++++..+++.
T Consensus         4 dtfvi~~v~v~Ivclliya~YrR~   27 (70)
T PHA02902          4 DTFVILAVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh
Confidence            344555566666666666666665


No 55 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=28.71  E-value=1.5e+02  Score=18.23  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=23.8

Q ss_pred             HHHHHhhCCeEEEecCC----ccEEEEcCHHHHHHHHHh
Q 048742           61 AKLSRVYGPIFKLKLGS----KICIHISSPSLAKQILKD   95 (472)
Q Consensus        61 ~~~~~~yg~v~~~~~~~----~~~v~v~dp~~v~~i~~~   95 (472)
                      .+..++||+|-++.+..    .-+|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            46778999998887554    234445788888877753


No 56 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=28.39  E-value=84  Score=28.16  Aligned_cols=69  Identities=20%  Similarity=0.372  Sum_probs=41.7

Q ss_pred             HHHHHhhhcCCCCC---CCCCCccccccccc----cCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccc
Q 048742          362 QSVVKETLRLHPPL---PLLVPHCPVESCTV----GGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEY  434 (472)
Q Consensus       362 ~a~i~E~lRl~~~~---~~~~~r~~~~~~~~----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~  434 (472)
                      +.+++.|..+.||.   |+...-..+.|..+    =.-.|..||.|.++                               
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-------------------------------  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-------------------------------  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-------------------------------
Confidence            45788888899874   44443334444333    12457777766653                               


Q ss_pred             cCCccceeecCCCcccccChHHHHHHHHHHH
Q 048742          435 QGTNFRYLPFGSGRRICAGISLAEKMVAYVL  465 (472)
Q Consensus       435 ~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l  465 (472)
                       +++++++-||.+  +-.||.+|. |+|.++
T Consensus       325 -GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 -GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             -CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence             234455555543  457888887 888765


No 57 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=28.22  E-value=1.9e+02  Score=19.92  Aligned_cols=22  Identities=9%  Similarity=0.327  Sum_probs=10.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC
Q 048742           10 VVRVIATMSVAIIAVSWLIKKS   31 (472)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~   31 (472)
                      +..++++++++++++..+...+
T Consensus        27 lMtILivLVIIiLlImlfqsSS   48 (85)
T PF10717_consen   27 LMTILIVLVIIILLIMLFQSSS   48 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC
Confidence            3444444444444444444443


No 58 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.98  E-value=1e+02  Score=17.58  Aligned_cols=13  Identities=23%  Similarity=0.470  Sum_probs=9.9

Q ss_pred             HhhChHHHHHHHH
Q 048742          326 MLQHSEIMRKVQQ  338 (472)
Q Consensus       326 L~~~p~~~~~l~~  338 (472)
                      +.+||++++.++.
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3489999988764


No 59 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=27.09  E-value=89  Score=18.01  Aligned_cols=28  Identities=29%  Similarity=0.521  Sum_probs=18.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhc
Q 048742          330 SEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLR  370 (472)
Q Consensus       330 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  370 (472)
                      .++.+.+|.|++.+..             ..++|+..|..|
T Consensus        10 qEIL~EvrkEl~K~K~-------------EIIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKVKE-------------EIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHhc
Confidence            5677777777776532             256777777655


No 60 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=25.69  E-value=21  Score=27.59  Aligned_cols=34  Identities=29%  Similarity=0.429  Sum_probs=21.8

Q ss_pred             CCCCccccccCCccccCCccceeecCCCcccccChHHHH
Q 048742          420 FHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAE  458 (472)
Q Consensus       420 f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  458 (472)
                      -.||.|+-=+    ..+.-+.|+- |.+.|.||+..+|.
T Consensus        43 I~PenvvlYN----~~G~lYyYle-gss~~~CP~nE~av   76 (146)
T PF04798_consen   43 IEPENVVLYN----TAGTLYYYLE-GSSSVFCPPNEFAV   76 (146)
T ss_pred             EcCceEEEEE----CCCeEEEEEe-ccccccCCCCceEE
Confidence            4566665211    1334556677 89999999877763


No 61 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.31  E-value=1.6e+02  Score=22.34  Aligned_cols=41  Identities=17%  Similarity=0.322  Sum_probs=30.8

Q ss_pred             CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhc
Q 048742           54 PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQ   96 (472)
Q Consensus        54 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~   96 (472)
                      .+....+.+|.++||.+--.  .+...+...|++..+++...+
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            34467889999999987432  245667788999999998764


No 62 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=24.88  E-value=49  Score=21.15  Aligned_cols=7  Identities=57%  Similarity=1.108  Sum_probs=5.6

Q ss_pred             CCCcccc
Q 048742          421 HPERFLK  427 (472)
Q Consensus       421 ~p~R~l~  427 (472)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888885


No 63 
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=24.03  E-value=59  Score=31.07  Aligned_cols=30  Identities=30%  Similarity=0.492  Sum_probs=20.9

Q ss_pred             HHHHHhhcCCCCCCCCCCCCCccccccccC
Q 048742           23 AVSWLIKKSRTPPLPPGPLGLPVLGNLLSI   52 (472)
Q Consensus        23 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~   52 (472)
                      +..|..++.++...+-||+++|-+||.+.+
T Consensus       115 asRWeWkrlkp~~p~nG~pPCPRlGHSFsl  144 (830)
T KOG4152|consen  115 ASRWEWKRLKPKTPKNGPPPCPRLGHSFSL  144 (830)
T ss_pred             hhhhhHhhcCCCCCCCCCCCCCccCceeEE
Confidence            344555555555455599999999998876


No 64 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=23.76  E-value=1.3e+02  Score=29.15  Aligned_cols=37  Identities=11%  Similarity=-0.019  Sum_probs=23.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 048742            8 DTVVRVIATMSVAIIAVSWLIKKSRTPPLPPGPLGLP   44 (472)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p   44 (472)
                      +++..+++.++++++++.+........+..|+|++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~   41 (463)
T PLN02196          5 ALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTM   41 (463)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence            4455566666655666655555667788888887654


No 65 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=23.47  E-value=91  Score=19.44  Aligned_cols=18  Identities=22%  Similarity=0.281  Sum_probs=15.2

Q ss_pred             hCCeEEEecCCccEEEEc
Q 048742           67 YGPIFKLKLGSKICIHIS   84 (472)
Q Consensus        67 yg~v~~~~~~~~~~v~v~   84 (472)
                      -|+++++..||..++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999998888863


No 66 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.58  E-value=1.1e+02  Score=17.91  Aligned_cols=18  Identities=11%  Similarity=0.337  Sum_probs=14.1

Q ss_pred             HHHHHHHhhChHHHHHHH
Q 048742          320 EWAMAEMLQHSEIMRKVQ  337 (472)
Q Consensus       320 ~~~l~~L~~~p~~~~~l~  337 (472)
                      .|-++.++++||+|.-|.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            456778899999998765


No 67 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=22.07  E-value=61  Score=24.45  Aligned_cols=21  Identities=43%  Similarity=0.588  Sum_probs=17.4

Q ss_pred             ccccccccCeecCCCCEEEEe
Q 048742          383 PVESCTVGGYTIPKGSRVFVN  403 (472)
Q Consensus       383 ~~~~~~~~g~~ip~G~~v~~~  403 (472)
                      ++.|.+++|-.||+|+.|...
T Consensus        73 ~~~d~~~~g~~i~~GtWv~~~   93 (122)
T PF14550_consen   73 APEDMEIGGETIPKGTWVVGV   93 (122)
T ss_pred             cCCCcccCCeeecceEEEEEE
Confidence            456889999999999999753


No 68 
>PF00558 Vpu:  Vpu protein;  InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=21.81  E-value=1.4e+02  Score=20.53  Aligned_cols=7  Identities=29%  Similarity=0.060  Sum_probs=0.0

Q ss_pred             Ccccchh
Q 048742            1 MFSVIFE    7 (472)
Q Consensus         1 ~~~~~~~    7 (472)
                      |-++.+.
T Consensus         1 M~~l~i~    7 (81)
T PF00558_consen    1 MQSLEIL    7 (81)
T ss_dssp             -------
T ss_pred             CchHHHH
Confidence            3444343


No 69 
>TIGR02837 spore_II_R stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage II sporulation protein R.
Probab=21.79  E-value=91  Score=24.98  Aligned_cols=16  Identities=19%  Similarity=0.287  Sum_probs=11.6

Q ss_pred             ccccCeecCCCCEEEE
Q 048742          387 CTVGGYTIPKGSRVFV  402 (472)
Q Consensus       387 ~~~~g~~ip~G~~v~~  402 (472)
                      -.+++++.|+|..=.+
T Consensus       121 K~YG~~~~PaG~YeAl  136 (168)
T TIGR02837       121 KLYGNIVLPAGEYEAL  136 (168)
T ss_pred             cccCCEeccCCceEEE
Confidence            3558899999986444


No 70 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=21.46  E-value=70  Score=17.32  Aligned_cols=16  Identities=31%  Similarity=0.787  Sum_probs=12.8

Q ss_pred             CccceeecCCCccccc
Q 048742          437 TNFRYLPFGSGRRICA  452 (472)
Q Consensus       437 ~~~~~~~Fg~G~r~C~  452 (472)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3457999999999994


No 71 
>PF10915 DUF2709:  Protein of unknown function (DUF2709);  InterPro: IPR024484 Members of this family appear restricted to Chlamydiales. Their function is unknown.
Probab=21.37  E-value=1.8e+02  Score=23.75  Aligned_cols=52  Identities=13%  Similarity=0.161  Sum_probs=37.0

Q ss_pred             CccccccccC--CCChhHHHHHHHHhhC-CeEEEecCC---ccEEEEcCHHHHHHHHHhc
Q 048742           43 LPVLGNLLSI--EPDFHRYCAKLSRVYG-PIFKLKLGS---KICIHISSPSLAKQILKDQ   96 (472)
Q Consensus        43 ~p~~G~~~~~--~~~~~~~~~~~~~~yg-~v~~~~~~~---~~~v~v~dp~~v~~i~~~~   96 (472)
                      +|+.|..+.=  -.+|...+..|..++. +.=|.  +|   .++.|--||+.++.-...+
T Consensus        90 CPFTGKVF~DNt~~nPQDAIYDWvSkCPeN~ER~--~G~rVKRF~VSeDPevIk~Yi~~~  147 (238)
T PF10915_consen   90 CPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERQ--GGVRVKRFFVSEDPEVIKEYIVPR  147 (238)
T ss_pred             cCCcCccccCCCCCChHHHHHHHHhhCCccchhc--cCeEEEEEeecCCHHHHHHhccCC
Confidence            7999988763  5788999999988775 33322  22   4567777999999866443


No 72 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=21.01  E-value=2e+02  Score=20.24  Aligned_cols=19  Identities=26%  Similarity=0.475  Sum_probs=15.7

Q ss_pred             ChHHHHHHHHHHHHhhcCC
Q 048742          329 HSEIMRKVQQELDEVVGNG  347 (472)
Q Consensus       329 ~p~~~~~l~~Ei~~~~~~~  347 (472)
                      .|++.+.+++|+-+++...
T Consensus        35 ~p~~l~~lk~eil~VIsKY   53 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKRY   53 (87)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            4999999999998887543


No 73 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=21.00  E-value=2.5e+02  Score=23.19  Aligned_cols=60  Identities=18%  Similarity=0.175  Sum_probs=35.5

Q ss_pred             hcccccchHHHHHHHHHHHhhC--------------hHHHHHHHHHHHHhhcCCcceec--ccCCCCccHHHHHHhhhcC
Q 048742          308 VLGGTDTTSTTLEWAMAEMLQH--------------SEIMRKVQQELDEVVGNGSIVEE--SHIPKLHFLQSVVKETLRL  371 (472)
Q Consensus       308 ~~Ag~~tt~~~l~~~l~~L~~~--------------p~~~~~l~~Ei~~~~~~~~~~~~--~~l~~lp~l~a~i~E~lRl  371 (472)
                      -.||..||+.+.--++..+.-+              |+.-.++++|-    ..+..+++  ..-+.++.|+.++.|--|.
T Consensus        14 SGAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar----~~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          14 SGAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKAR----DAGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHH----HcCCcceecCccccchHHHHHHHHHhccc
Confidence            3567777777766666655544              44444444433    23444554  2346788899888886554


No 74 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.91  E-value=1.6e+02  Score=17.76  Aligned_cols=8  Identities=25%  Similarity=0.659  Sum_probs=3.5

Q ss_pred             HHHHhhcC
Q 048742           24 VSWLIKKS   31 (472)
Q Consensus        24 ~~~~~~~~   31 (472)
                      +.|.++++
T Consensus        26 ~~w~~~~~   33 (49)
T PF05545_consen   26 VIWAYRPR   33 (49)
T ss_pred             HHHHHccc
Confidence            33444444


No 75 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.72  E-value=2.9e+02  Score=19.10  Aligned_cols=39  Identities=5%  Similarity=0.172  Sum_probs=28.8

Q ss_pred             hHHHHHHHHhhCCe---EEEecCCccEEEEcCH-----HHHHHHHHh
Q 048742           57 HRYCAKLSRVYGPI---FKLKLGSKICIHISSP-----SLAKQILKD   95 (472)
Q Consensus        57 ~~~~~~~~~~yg~v---~~~~~~~~~~v~v~dp-----~~v~~i~~~   95 (472)
                      .+.-++++++|.++   +++..++..-+.|.+.     +.+.+++..
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            45667888999986   8999888777887543     666666654


No 76 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=20.53  E-value=44  Score=20.81  Aligned_cols=10  Identities=40%  Similarity=1.066  Sum_probs=8.7

Q ss_pred             ecCCCccccc
Q 048742          443 PFGSGRRICA  452 (472)
Q Consensus       443 ~Fg~G~r~C~  452 (472)
                      .||.|+|.|.
T Consensus        11 ~yGkGsr~C~   20 (54)
T PTZ00218         11 TYGKGSRQCR   20 (54)
T ss_pred             cCCCCCCeee
Confidence            5899999995


No 77 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.31  E-value=1.7e+02  Score=19.23  Aligned_cols=25  Identities=4%  Similarity=0.137  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 048742          316 STTLEWAMAEMLQHSEIMRKVQQEL  340 (472)
Q Consensus       316 ~~~l~~~l~~L~~~p~~~~~l~~Ei  340 (472)
                      ....+-++--++++||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4556777888999999999998754


Done!