Query         048742
Match_columns 472
No_of_seqs    173 out of 1964
Neff          11.4
Searched_HMMs 29240
Date          Mon Mar 25 22:07:45 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048742hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3tbg_A Cytochrome P450 2D6; mo 100.0 9.6E-76 3.3E-80  566.1  36.9  426   32-472     7-442 (479)
  2 3swz_A Steroid 17-alpha-hydrox 100.0 1.7E-75 5.9E-80  565.7  38.4  429   31-472     4-445 (494)
  3 3pm0_A Cypib1, cytochrome P450 100.0 4.5E-76 1.6E-80  572.3  32.9  431   30-472     4-451 (507)
  4 2hi4_A Cytochrome P450 1A2; CY 100.0 1.1E-74 3.7E-79  559.5  35.5  427   33-472    14-455 (495)
  5 3czh_A Cytochrome P450 2R1; vi 100.0 2.5E-74 8.5E-79  554.6  35.1  425   32-472     9-443 (481)
  6 2fdv_A Cytochrome P450 2A6; CY 100.0 3.9E-74 1.3E-78  553.1  36.4  422   33-472     8-438 (476)
  7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 5.8E-74   2E-78  553.1  37.7  422   32-472     7-437 (476)
  8 1po5_A Cytochrome P450 2B4; ox 100.0 4.7E-74 1.6E-78  552.5  35.7  420   32-472     7-438 (476)
  9 3k9v_A 1,25-dihydroxyvitamin D 100.0 4.5E-74 1.5E-78  554.9  34.8  417   30-472    19-451 (482)
 10 1r9o_A Cytochrome P450 2C9; mo 100.0 5.3E-74 1.8E-78  552.6  35.1  423   32-472     8-439 (477)
 11 3qz1_A Steroid 21-hydroxylase; 100.0 4.4E-74 1.5E-78  556.6  27.2  413   30-472    24-448 (496)
 12 3ld6_A Lanosterol 14-alpha dem 100.0 8.7E-75   3E-79  555.3  20.5  411   33-472     9-422 (461)
 13 3nxu_A Cytochrome P450 3A4; al 100.0 2.2E-74 7.4E-79  557.2  21.6  419   34-472    13-441 (485)
 14 3s79_A Cytochrome P450 19A1; o 100.0 1.2E-72 4.2E-77  547.5  32.2  409   32-472    42-458 (503)
 15 3n9y_A Cholesterol SIDE-chain  100.0 1.2E-71 4.2E-76  538.3  32.2  422   30-472     4-443 (487)
 16 2ve3_A Putative cytochrome P45 100.0 9.4E-72 3.2E-76  531.1  27.3  403   32-472     9-412 (444)
 17 2cib_A Cytochrome P450 51; hem 100.0 3.3E-71 1.1E-75  529.1  27.7  409   35-472     4-415 (455)
 18 2ij2_A Cytochrome P450 BM3; mo 100.0 3.5E-70 1.2E-74  523.9  31.0  414   34-472     2-421 (470)
 19 3dbg_A Putative cytochrome P45 100.0 5.4E-71 1.8E-75  529.9  22.4  406   35-472    23-431 (467)
 20 3gw9_A Sterol 14alpha-demethyl 100.0 4.3E-70 1.5E-74  522.4  27.3  408   34-472     2-416 (450)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 7.1E-71 2.4E-75  528.7  20.5  412   32-472     8-422 (461)
 22 3mdm_A Cholesterol 24-hydroxyl 100.0 9.1E-68 3.1E-72  506.7  31.3  393   54-472    10-410 (456)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 9.4E-67 3.2E-71  504.6  19.9  414   30-472     8-448 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 8.2E-67 2.8E-71  504.4  17.8  416   28-472     6-448 (491)
 25 3b6h_A Prostacyclin synthase;  100.0   2E-64 6.7E-69  488.9  25.0  417   28-472    11-452 (498)
 26 2cd8_A Cytochrome P450 monooxy 100.0 6.1E-64 2.1E-68  474.3  27.3  367   32-472    23-395 (436)
 27 1jfb_A Nitric-oxide reductase  100.0 3.7E-62 1.3E-66  459.2  32.5  364   36-472     2-374 (404)
 28 3b98_A Prostaglandin I2 syntha 100.0   1E-63 3.6E-68  481.3  20.8  403   29-472    12-433 (475)
 29 1ued_A P450 OXYC, P450 monooxy 100.0 2.3E-62 7.9E-67  459.7  27.0  358   32-472     7-377 (406)
 30 2zbx_A Cytochrome P450-SU1; be 100.0 3.2E-61 1.1E-65  452.9  30.4  364   33-472     3-376 (412)
 31 1izo_A P450bsbeta, cytochrome  100.0   2E-61 6.8E-66  456.2  28.0  370   43-472     8-384 (417)
 32 1cpt_A Cytochrome P450-TERP; o 100.0 1.1E-61 3.8E-66  458.6  24.7  375   33-472     4-398 (428)
 33 1s1f_A Putative cytochrome P45 100.0 2.6E-60   9E-65  445.8  29.2  359   34-472     7-374 (406)
 34 3awm_A Fatty acid alpha-hydrox 100.0   9E-61 3.1E-65  451.4  26.0  372   37-472     4-382 (415)
 35 3dsk_A Cytochrome P450 74A, ch 100.0 1.5E-61   5E-66  468.4  20.9  408   32-472    25-465 (495)
 36 3aba_A Cytochrome P450; oxidor 100.0 5.9E-60   2E-64  443.0  28.7  346   51-472    16-369 (403)
 37 3tyw_A Putative cytochrome P45 100.0 1.4E-59 4.8E-64  442.8  31.2  348   50-472    25-381 (417)
 38 2jjn_A Cytochrome P450 113A1;  100.0 2.4E-60 8.3E-65  447.1  25.9  361   28-472    12-374 (411)
 39 1n97_A CYP175A1; electron tran 100.0 1.4E-61 4.7E-66  452.5  17.2  354   39-472     3-357 (389)
 40 2z36_A MOXA, cytochrome P450 t 100.0 4.8E-60 1.6E-64  444.4  26.5  360   34-472     6-377 (413)
 41 2y5n_A MYCG, P-450-like protei 100.0 1.1E-59 3.9E-64  442.0  28.1  346   51-472    34-387 (417)
 42 2zwu_A Camphor 5-monooxygenase 100.0 6.4E-60 2.2E-64  443.5  25.6  361   32-472     8-379 (415)
 43 4fb2_A P450CIN; heme, monooxyg 100.0 5.2E-60 1.8E-64  443.2  24.8  343   51-472    16-362 (398)
 44 3a4g_A Vitamin D hydroxylase;  100.0 1.5E-59 5.2E-64  440.7  27.6  345   51-472    17-368 (411)
 45 3ejb_B Biotin biosynthesis cyt 100.0 1.8E-59 6.2E-64  440.9  28.0  350   51-472    10-365 (404)
 46 1odo_A Putative cytochrome P45 100.0 1.2E-59 4.2E-64  441.9  25.2  350   51-472    12-375 (408)
 47 3abb_A CYP105D6, cytochrome P4 100.0 7.1E-60 2.4E-64  443.5  22.8  346   50-472    20-374 (408)
 48 3oft_A Cytochrome P450, CYP101 100.0 1.2E-59 4.2E-64  440.8  24.1  344   51-472    21-366 (396)
 49 1z8o_A 6-deoxyerythronolide B  100.0 3.8E-59 1.3E-63  437.9  26.0  345   51-472    11-372 (404)
 50 2z3t_A Cytochrome P450; monoxy 100.0 6.8E-59 2.3E-63  438.2  27.4  350   52-472    18-385 (425)
 51 2xbk_A PIMD protein; epoxidati 100.0 1.7E-58 5.9E-63  431.8  29.8  340   52-472    24-374 (404)
 52 3dan_A Cytochrome P450 74A2; A 100.0 1.6E-59 5.3E-64  451.9  23.1  402   32-472     6-447 (473)
 53 1q5d_A P450 epoxidase; cytochr 100.0 7.4E-59 2.5E-63  437.8  27.0  353   51-472    23-386 (419)
 54 2xkr_A CYP142, putative cytoch 100.0 6.8E-59 2.3E-63  435.6  26.6  343   53-472    17-361 (398)
 55 3ivy_A Cytochrome P450 CYP125; 100.0 5.6E-59 1.9E-63  440.2  25.9  364   33-472    16-398 (433)
 56 2wm5_A CYP124, putative cytoch 100.0 2.4E-58 8.1E-63  435.5  29.5  350   54-472    44-407 (435)
 57 3buj_A CALO2; heme, iron, meta 100.0 3.3E-58 1.1E-62  430.8  28.8  344   53-472    12-363 (397)
 58 1gwi_A CYP154C1, cytochrome P4 100.0 3.3E-59 1.1E-63  438.8  22.0  348   51-472    14-376 (411)
 59 3nc3_A Cytochrome P450 CYPX; c 100.0 2.4E-59 8.1E-64  443.1  21.1  357   53-472    52-410 (441)
 60 2dkk_A Cytochrome P450; CYP158 100.0   1E-58 3.4E-63  434.8  24.6  342   54-472    27-377 (411)
 61 2uuq_A CYP130, cytochrome P450 100.0 9.9E-59 3.4E-63  435.6  23.6  345   53-472    24-382 (414)
 62 3tkt_A Cytochrome P450; aromat 100.0   2E-58 6.9E-63  438.3  25.6  356   56-472    47-420 (450)
 63 3lxh_A Cytochrome P450; heme,  100.0 3.3E-58 1.1E-62  433.9  25.6  349   51-472    35-386 (421)
 64 1n40_A P450 MT2, cytochrome P4 100.0 7.4E-58 2.5E-62  427.7  25.0  344   51-472    13-366 (396)
 65 3oo3_A OXY protein; cytochrome 100.0 3.1E-57 1.1E-61  422.8  28.9  340   51-472     9-353 (384)
 66 3mgx_A Putative P450 monooxyge 100.0 1.9E-58 6.6E-63  433.0  20.7  343   53-472    36-385 (415)
 67 3r9b_A Cytochrome P450 164A2;  100.0 1.4E-57 4.9E-62  430.0  26.4  353   51-472    26-387 (418)
 68 1lfk_A OXYB, P450 monooxygenas 100.0 4.1E-58 1.4E-62  430.0  22.5  335   60-472    19-368 (398)
 69 3rwl_A Cytochrome P450 alkane  100.0 1.9E-56 6.6E-61  421.3  27.5  349   53-472    37-397 (426)
 70 2wiy_A XPLA-heme, cytochrome P 100.0 9.8E-56 3.3E-60  412.8  27.1  346   54-472    20-366 (394)
 71 3b4x_A 367AA long hypothetical 100.0   8E-56 2.7E-60  409.3  24.0  328   56-472     1-338 (367)
 72 3p3o_A Cytochrome P450; monoox 100.0 2.3E-56 7.8E-61  420.1  20.1  347   53-472    32-386 (416)
 73 2rfb_A Cytochrome P450; heme,  100.0   2E-55   7E-60  403.3  20.2  312   65-472     2-316 (343)
 74 1io7_A Cytochrome P450 CYP119; 100.0   1E-54 3.5E-59  402.6  22.5  327   56-472     1-338 (368)
 75 4dnj_A Putative cytochrome P45 100.0 2.2E-53 7.5E-58  398.7  23.5  357   41-472    18-382 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 7.2E-49 2.4E-53  367.0  27.3  347   53-472    36-385 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.5E-45 5.2E-50  336.5  -0.7  305   36-472    35-353 (381)
 78 2jwa_A Receptor tyrosine-prote  62.4      16 0.00056   20.8   4.1   20   12-31     20-39  (44)
 79 3j1r_A Archaeal adhesion filam  49.0      23 0.00077   17.2   3.3   18   10-27      8-25  (26)
 80 2krb_A Eukaryotic translation   46.4      57  0.0019   21.0   6.4   51   45-95      5-66  (81)
 81 2diu_A KIAA0430 protein; struc  33.9      98  0.0033   21.2   5.2   50   45-95     13-65  (96)
 82 1m46_B IQ4, IQ4 motif from MYO  32.0      39  0.0013   15.7   2.0   12  331-342     8-19  (26)
 83 3ijw_A Aminoglycoside N3-acety  30.3      26  0.0009   29.5   2.4   24  394-417    63-86  (268)
 84 2nlw_A Eukaryotic translation   29.3 1.4E+02  0.0047   20.4   7.0   53   43-95     17-80  (105)
 85 3lqv_A PRE-mRNA branch site pr  28.7 1.5E+02   0.005   20.6   6.8   58   36-95      3-66  (115)
 86 2nyg_A YOKD protein; PFAM02522  28.4      29 0.00099   29.4   2.3   25  393-417    60-84  (273)
 87 3d2w_A TAR DNA-binding protein  26.2 1.4E+02  0.0049   19.6   5.7   48   43-92     13-64  (89)
 88 1whv_A Poly(A)-specific ribonu  25.9 1.1E+02  0.0039   21.0   4.4   39   57-95     29-68  (100)
 89 1s79_A Lupus LA protein; RRM,   24.6 1.6E+02  0.0055   20.1   5.4   50   45-96     15-72  (103)
 90 3sma_A FRBF; N-acetyl transfer  24.3      39  0.0013   28.8   2.4   23  395-417    71-93  (286)
 91 1iij_A ERBB-2 receptor protein  24.3      30   0.001   18.5   1.1   17   13-29     17-33  (35)
 92 1iqt_A AUF1, heterogeneous nuc  22.6 1.5E+02   0.005   18.4   4.6   40   57-96     13-61  (75)
 93 1use_A VAsp, vasodilator-stimu  21.9      83  0.0028   17.9   2.6   29  330-371    14-42  (45)
 94 3s6e_A RNA-binding protein 39;  21.3 1.2E+02   0.004   21.5   4.1   59   37-95      3-74  (114)
 95 2pe8_A Splicing factor 45; RRM  20.3 1.6E+02  0.0055   20.3   4.6   57   39-95      6-75  (105)

No 1  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=9.6e-76  Score=566.12  Aligned_cols=426  Identities=25%  Similarity=0.430  Sum_probs=330.7

Q ss_pred             CCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ++.+.||||+++|++||++.+ .++++..+.+|++|||+||++++|++++|+|+||+++++|+.+++..|+.++......
T Consensus         7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~   86 (479)
T 3tbg_A            7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ   86 (479)
T ss_dssp             --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred             CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence            445799999999999999988 4678999999999999999999999999999999999999998888887776554443


Q ss_pred             hhccC--CcceEeCCCChhHHHHHHHHHHHhccccccch--h-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH
Q 048742          111 VTSYG--LHDIVWMPNGPEWRQLRKVFVREMMSSLNLDD--C-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       111 ~~~~~--~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~--~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~  185 (472)
                      ...++  ..++++..+|+.|+++|+.+.+ .++...+..  + ..+......+...+....++.+|+...+..+++++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (479)
T 3tbg_A           87 ILGFGPRSQGVFLARYGPAWREQRRFSVS-TLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIA  165 (479)
T ss_dssp             GGTCBTTBCCSTTCCSSHHHHHHHHHHHH-HHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHH
T ss_pred             HhccCCCCCceeeCCCCHHHHHHHHHHHH-HhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHH
Confidence            33322  2345567789999999999988 555555433  2 4555555666666655557889999999999999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcc--cchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNI--SDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      .++||..++..+.+.  ..+.+..............  ....|...+  .....++.....+...+.+.+.++++.....
T Consensus       166 ~~~fg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (479)
T 3tbg_A          166 SLTCGRRFEYDDPRF--LRLLDLAQEGLKEESGFLREVLNAVPVLLH--IPALAGKVLRFQKAFLTQLDELLTEHRMTWD  241 (479)
T ss_dssp             HHHHSCCCCTTCHHH--HHHHHHHHHHHHTTSSHHHHHHHHSGGGGG--SHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HhhcCCcccccchhh--hhhhhhhhhhhhhhhhhhhhhhcccchhcc--chhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999987664322  2333333332222221100  011122211  1122233334445555566666655544321


Q ss_pred             hhhhhcccccccccHHHHHHHHhhc--CCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQ--GEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                      .       .....|.++.+......  .+.+..++++++.+++.++++||+|||+++++|++++|++||++|+||++|++
T Consensus       242 ~-------~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  314 (479)
T 3tbg_A          242 P-------AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEID  314 (479)
T ss_dssp             T-------TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             c-------ccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence            1       13455666666554322  23356799999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCC
Q 048742          342 EVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFH  421 (472)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  421 (472)
                      ++++.+..++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+
T Consensus       315 ~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~  394 (479)
T 3tbg_A          315 DVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH  394 (479)
T ss_dssp             HHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCC
T ss_pred             HHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccC
Confidence            99988888999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||++++++.   ..+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       395 PeRfl~~~~~~---~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f  442 (479)
T 3tbg_A          395 PEHFLDAQGHF---VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF  442 (479)
T ss_dssp             GGGGBCTTCCB---CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             ccccCCCCccc---CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHcc
Confidence            99999876542   2466899999999999999999999999999999987


No 2  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=1.7e-75  Score=565.74  Aligned_cols=429  Identities=25%  Similarity=0.460  Sum_probs=347.1

Q ss_pred             CCCCCCCCCCCCCccccccccCC--CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           31 SRTPPLPPGPLGLPVLGNLLSIE--PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        31 ~~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      ++..+.||||+++|++||++.+.  ++++..+.+|+++||+||+++++++++++|+||+.+++++.++...|+.++....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            34567899999999999999885  3578999999999999999999999999999999999999998888887776543


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhccc--cccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSS--LNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~--~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~  185 (472)
                      ......+..++++..+|++|+++|+++.+ .|+.  ..+..+ +.+.++++.+++.+....++.+|+...+..+++|+|+
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLAMA-TFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHHHH-HTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence            33333333455556679999999999998 6653  456667 8999999999999877557789999999999999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      .++||.+++..+ +.. ..+....+.+........+.+++|++.+++. ...+...+..+.+.+++.+.++++++...  
T Consensus       163 ~~~fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  237 (494)
T 3swz_A          163 LICFNTSYKNGD-PEL-NVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKFR--  237 (494)
T ss_dssp             HHHHSCCCCTTC-THH-HHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred             HHHcCCcCCCCC-HHH-HHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence            999999886542 222 3344444444445555556677887766543 22345555666667777777766654321  


Q ss_pred             hhhcccccccccHHHHHHHHhhcCC--------CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHH
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGE--------DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQ  337 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~--------~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~  337 (472)
                            .....|+++.|+++....+        ....++++++..++.++++||+|||+++++|++++|++||++|+|++
T Consensus       238 ------~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~  311 (494)
T 3swz_A          238 ------SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLY  311 (494)
T ss_dssp             ------TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             ------ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHH
Confidence                  1345799999998764321        13458999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCC
Q 048742          338 QELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       338 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      +|++++++.+..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||
T Consensus       312 ~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  391 (494)
T 3swz_A          312 EEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQP  391 (494)
T ss_dssp             HHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSST
T ss_pred             HHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCc
Confidence            99999999888899999999999999999999999999997789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          418 LEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       418 ~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|+||||+++++... ......|+|||.|+|.|+|++||++|++++++.||++|
T Consensus       392 ~~F~PeRfl~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f  445 (494)
T 3swz_A          392 DQFMPERFLNPAGTQL-ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRF  445 (494)
T ss_dssp             TSCCGGGGBCTTSSSB-CCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             ccCCcccccCCCCccc-cCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            9999999998654321 12345799999999999999999999999999999986


No 3  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.5e-76  Score=572.34  Aligned_cols=431  Identities=25%  Similarity=0.429  Sum_probs=331.7

Q ss_pred             cCCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchh
Q 048742           30 KSRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASA  109 (472)
Q Consensus        30 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~  109 (472)
                      +.++.+.||||+++|++||++.+.++++..+.+++++||+||++++++.++++|+||+.+++|+.+....|..++.....
T Consensus         4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~   83 (507)
T 3pm0_A            4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF   83 (507)
T ss_dssp             ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred             ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence            34556789999999999999999889999999999999999999999999999999999999998877778766654433


Q ss_pred             hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccch------h-HHHHHHHHHHHHHHHHhc--CCccchHHHHHHHH
Q 048742          110 LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDD------C-ALRRAEVREMVKEVYKKV--GSPINLGEQMFLAI  180 (472)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~------~-~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~  180 (472)
                      .... ++.++++..+|+.|+++|+.+++ .++......      + +.+.+.++++++.+....  ++.+|+.+++..++
T Consensus        84 ~~~~-~g~~l~~~~~g~~w~~~R~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  161 (507)
T 3pm0_A           84 RVVS-GGRSMAFGHYSEHWKVQRRAAHS-MMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV  161 (507)
T ss_dssp             HHGG-GGTCSSSSCSSHHHHHHHHHHHH-HHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred             Hhhc-CCCceEECCCChHHHHHHHHHHH-HHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence            3222 33455566679999999999987 555443333      6 889999999999997642  57899999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccch--hhhHHHHHHHHHHHHHHHHHHHHH
Q 048742          181 LNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQ--GIESKTKKLVLWFDRIFDSVIVQR  258 (472)
Q Consensus       181 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~  258 (472)
                      +|+++.++||.+++..+ +.. .++.+.+..+........+...+|++.+++..  ...+...+..+.+.+++.+.++++
T Consensus       162 ~dvi~~~~fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~  239 (507)
T 3pm0_A          162 ANVMSAVCFGCRYSHDD-PEF-RELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRH  239 (507)
T ss_dssp             HHHHHHHHTSCCCCTTC-HHH-HHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccccCCCCC-HHH-HHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987643 222 34444455555555444455667777655422  134556666677788888888877


Q ss_pred             HHHhHhhhhhcccccccccHHHHHHHHhhcCCC------CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHH
Q 048742          259 MKIDAAKGQISKQNEENKDFLHFLLELKQQGED------KTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEI  332 (472)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~  332 (472)
                      ++....       .....|+++.++...+....      +..++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       240 ~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~  312 (507)
T 3pm0_A          240 CESLRP-------GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDV  312 (507)
T ss_dssp             HHHCCT-------TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             Hhcccc-------ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHH
Confidence            664311       02467999999965432111      22589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCC
Q 048742          333 MRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPE  412 (472)
Q Consensus       333 ~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  412 (472)
                      |++|++|++++++.++.++++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++|+||+
T Consensus       313 ~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~  392 (507)
T 3pm0_A          313 QTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPL  392 (507)
T ss_dssp             HHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTT
T ss_pred             HHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcc
Confidence            99999999999988888999999999999999999999999999877899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          413 AWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       413 ~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||++|+||||+++++... ...+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       393 ~~~dp~~F~PeRfl~~~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f  451 (507)
T 3pm0_A          393 KWPNPENFDPARFLDKDGLIN-KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQC  451 (507)
T ss_dssp             TCSSSSSCCGGGGBCTTSCBC-HHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             cCCCcCccCCCcccCCCCccc-CCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHe
Confidence            999999999999998654311 11235799999999999999999999999999999986


No 4  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.1e-74  Score=559.48  Aligned_cols=427  Identities=26%  Similarity=0.435  Sum_probs=340.7

Q ss_pred             CCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhh
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVT  112 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~  112 (472)
                      +.+.+|||+++|++||++.+.++++..+.+++++||+||++++++.++++|+||+.+++|+.++...|+.++........
T Consensus        14 ~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~   93 (495)
T 2hi4_A           14 GLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI   93 (495)
T ss_dssp             TCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS
T ss_pred             CCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh
Confidence            34445999999999999988888999999999999999999999999999999999999998876667665543222111


Q ss_pred             ccCCcceEeC-CCChhHHHHHHHHHHHhcc---cccc---c---hh-HHHHHHHHHHHHHHHH--hcCCccchHHHHHHH
Q 048742          113 SYGLHDIVWM-PNGPEWRQLRKVFVREMMS---SLNL---D---DC-ALRRAEVREMVKEVYK--KVGSPINLGEQMFLA  179 (472)
Q Consensus       113 ~~~~~~~~~~-~~~~~~~~~R~~l~~~~~~---~~~l---~---~~-~~~~~~~~~~~~~l~~--~~~~~~d~~~~~~~~  179 (472)
                       .+..++++. .+|+.|+++|+++.+ .|+   ....   .   .+ +.+.+.++++++.+..  ..++.+|+.+++..+
T Consensus        94 -~~~~~l~~~~~~g~~w~~~Rr~~~~-~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~  171 (495)
T 2hi4_A           94 -TDGQSLTFSTDSGPVWAARRRLAQN-ALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVS  171 (495)
T ss_dssp             -TTSCCTTTSSCCSHHHHHHHHHHHH-HHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred             -cCCCCEEEcCCCChHHHHHHHHHHH-HHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Confidence             122344444 369999999999988 543   3332   1   56 8999999999999976  346789999999999


Q ss_pred             HHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 048742          180 ILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRM  259 (472)
Q Consensus       180 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  259 (472)
                      ++|+|+.++||.+++..+ +.. .++.+..+.+........+...+|++.+++. ...++..+..+.+.+++.+.+++++
T Consensus       172 ~~dvi~~~~fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~  248 (495)
T 2hi4_A          172 VANVIGAMCFGQHFPESS-DEM-LSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKTVQEHY  248 (495)
T ss_dssp             HHHHHHHHHHGGGSCTTC-HHH-HHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCC-HHH-HHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999886432 222 3333334444433332234456777654432 2234556667778888888888877


Q ss_pred             HHhHhhhhhcccccccccHHHHHHHHhhcC--CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHH
Q 048742          260 KIDAAKGQISKQNEENKDFLHFLLELKQQG--EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQ  337 (472)
Q Consensus       260 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~  337 (472)
                      +...      .  ....|+++.|++.....  +.+..++++++.+++.++++||+|||+++++|++++|++||++|++|+
T Consensus       249 ~~~~------~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  320 (495)
T 2hi4_A          249 QDFD------K--NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQ  320 (495)
T ss_dssp             HTCC------T--TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             Hhhc------c--cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHH
Confidence            5321      0  23479999999764321  113468999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCC
Q 048742          338 QELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       338 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      +|++++++.++.++++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++||||++|+||
T Consensus       321 ~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP  400 (495)
T 2hi4_A          321 KELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDP  400 (495)
T ss_dssp             HHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSST
T ss_pred             HHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCc
Confidence            99999998877899999999999999999999999999986789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          418 LEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       418 ~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++||||||+++++.......+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       401 ~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  455 (495)
T 2hi4_A          401 SEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQL  455 (495)
T ss_dssp             TSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999997543211011346799999999999999999999999999999987


No 5  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=2.5e-74  Score=554.59  Aligned_cols=425  Identities=26%  Similarity=0.432  Sum_probs=342.0

Q ss_pred             CCCCCCCCCCCCccccccccCCCC---hhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPD---FHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~---~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      .+.+.||||+++|++||++.+..+   ++..+.+++++||+||++++++.++++|+||+.+++|+.++...|+.++....
T Consensus         9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~   88 (481)
T 3czh_A            9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL   88 (481)
T ss_dssp             ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred             CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence            345689999999999999887444   88999999999999999999999999999999999999887666766553322


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhcccccc--chh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNL--DDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVM  185 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l--~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~  185 (472)
                      .... .+..++++..+|+.|+++|+++.+ .|+...+  ..+ +.+.+.++++++.+....++.+|+.+.+..+++|+|+
T Consensus        89 ~~~~-~~~~~~~~~~~g~~w~~~R~~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~  166 (481)
T 3czh_A           89 FMKM-TKMGGLLNSRYGRGWVDHRRLAVN-SFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN  166 (481)
T ss_dssp             HHHH-HTTCSSTTCCSSHHHHHHHHHHHH-HHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred             HHhh-cCCCCeEeCCCChHHHHHHHHHHH-HHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence            2111 122244556789999999999998 7765443  557 8999999999999976546689999999999999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCc--ccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPN--ISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      .++||.+++.. ++.. .++.+.+...........  +...+|++.+++. ...++..+..+.+.+++.+.++++++...
T Consensus       167 ~~~fG~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (481)
T 3czh_A          167 LIIFGERFTYE-DTDF-QHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRK  243 (481)
T ss_dssp             HHHHSSCCCTT-CHHH-HHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHcCCCCCCC-CHHH-HHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999988643 2222 344444555444332211  3345666644331 22345566677788888888888765321


Q ss_pred             hhhhhcccccccccHHHHHHHHhhcCC--CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQGE--DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                            .  ....|+++.|+++.....  .+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++
T Consensus       244 ------~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  315 (481)
T 3czh_A          244 ------P--QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEID  315 (481)
T ss_dssp             ------T--TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ------C--CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence                  0  235799999998754321  134689999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCC
Q 048742          342 EVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFH  421 (472)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  421 (472)
                      ++++.++.++++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++||||++|+||++||
T Consensus       316 ~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  395 (481)
T 3czh_A          316 LIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFH  395 (481)
T ss_dssp             HHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCC
T ss_pred             HhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccC
Confidence            99987778999999999999999999999999999767899999999999999999999999999999999999999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||++++++.   ..+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       396 PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  443 (481)
T 3czh_A          396 PERFLDSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF  443 (481)
T ss_dssp             GGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CCceeCCCCCC---cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhe
Confidence            99999754321   2456799999999999999999999999999999986


No 6  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=3.9e-74  Score=553.13  Aligned_cols=422  Identities=22%  Similarity=0.416  Sum_probs=340.8

Q ss_pred             CCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           33 TPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      +.+.||||+++|++||++.+ ..+++.++.+++++||+||++++++.++++|+||+.+++|+.+....|+.++.......
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~   87 (476)
T 2fdv_A            8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW   87 (476)
T ss_dssp             CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred             cCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence            34679999999999999998 57889999999999999999999999999999999999999766556665443221111


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhcccccc--chh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHH
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNL--DDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNML  188 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l--~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~  188 (472)
                      .. +..+ ++..+|+.|+++|+++.+ .|+...+  +.+ +.+.+.++++++.+....++++|+.+++..+++|+|+.++
T Consensus        88 ~~-~~~~-l~~~~g~~~~~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~  164 (476)
T 2fdv_A           88 VF-KGYG-VVFSNGERAKQLRRFSIA-TLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIV  164 (476)
T ss_dssp             HH-TTCS-SSSCCHHHHHHHHHHHHH-HHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred             hc-CCCC-eEecCchHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence            11 1234 345589999999999988 7776655  567 9999999999999976556789999999999999999999


Q ss_pred             hcCCCCCCcccchhHHHHHHHHHHHHHhCCC--cccchhhh-cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          189 WGSSLHGEERSSVGVEFRQVVGEIVEMLGKP--NISDLFPT-LAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      ||.+++..+ +.. .++.+.+..........  .+...+|+ +.+++  ...++..+..+.+.+++.+.++++++...  
T Consensus       165 fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  238 (476)
T 2fdv_A          165 FGDRFDYKD-KEF-LSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTLD--  238 (476)
T ss_dssp             HSSCCCTTC-HHH-HHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred             cCCcCCCCC-HHH-HHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            999987432 222 44444444444332211  12234565 33332  22345566677788888888887765321  


Q ss_pred             hhhcccccccccHHHHHHHHhhcC--CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          266 GQISKQNEENKDFLHFLLELKQQG--EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                          .  ....|+++.+++.....  ..+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++
T Consensus       239 ----~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~  312 (476)
T 2fdv_A          239 ----P--NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRV  312 (476)
T ss_dssp             ----T--TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             ----C--CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence                1  23579999999875431  124568999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCC
Q 048742          344 VGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPE  423 (472)
Q Consensus       344 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  423 (472)
                      ++++..++++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++||||++|+||++||||
T Consensus       313 ~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~Pe  392 (476)
T 2fdv_A          313 IGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ  392 (476)
T ss_dssp             TCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGG
T ss_pred             hcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCch
Confidence            98777799999999999999999999999999966689999999999999999999999999999999999999999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||+++++..   ..+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       393 R~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  438 (476)
T 2fdv_A          393 HFLNEKGQF---KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF  438 (476)
T ss_dssp             GGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             hhCCCCCCC---CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhc
Confidence            999754332   1345799999999999999999999999999999986


No 7  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=5.8e-74  Score=553.08  Aligned_cols=422  Identities=25%  Similarity=0.433  Sum_probs=341.0

Q ss_pred             CCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ++.+.||||+++|++||++.+ ..+++..+.+|+++||+||++++++.++++|+||+.+++|+.+....|+.++......
T Consensus         7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~   86 (476)
T 3e6i_A            7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH   86 (476)
T ss_dssp             ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred             CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence            456789999999999999998 5788999999999999999999999999999999999999998777776655433222


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhcccccc--chh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNL--DDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l--~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      .. .+ . .++..+|+.|+++|++..+ .++...+  ..+ +.+.+.++++++.+....++.+|+.+++..+++|+|+.+
T Consensus        87 ~~-~~-~-~l~~~~g~~w~~~Rr~~~~-~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~~  162 (476)
T 3e6i_A           87 AH-RD-R-GIIFNNGPTWKDIRRFSLT-TLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADI  162 (476)
T ss_dssp             GG-TT-S-SSTTCCSTTHHHHHHHHHH-HHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHHH
T ss_pred             ee-cC-C-CEEecCCcHHHHHHHHHHH-HHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHHH
Confidence            22 22 2 3456689999999998777 5554433  335 788899999999997655778999999999999999999


Q ss_pred             HhcCCCCCCcccchhHHHHHHHHHHHHHhCCC--cccchhh-hcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          188 LWGSSLHGEERSSVGVEFRQVVGEIVEMLGKP--NISDLFP-TLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      +||.+++..+ +.. .++...+.+........  .+...+| ++.+++  ...+...+..+.+.+++.+.++++++... 
T Consensus       163 ~fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  237 (476)
T 3e6i_A          163 LFRKHFDYND-EKF-LRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSLD-  237 (476)
T ss_dssp             HHSCCCCTTC-HHH-HHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred             HcCCCCCCCC-HHH-HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhcCC-
Confidence            9999987653 222 34444444444333221  1223345 333332  22345566667788888888887765431 


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCC--CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGE--DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDE  342 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  342 (472)
                           .  ....|+++.++.......  .+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|+++
T Consensus       238 -----~--~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~  310 (476)
T 3e6i_A          238 -----P--NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDR  310 (476)
T ss_dssp             -----T--TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             -----C--CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence                 1  235699999998765432  2345899999999999999999999999999999999999999999999999


Q ss_pred             hhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCC
Q 048742          343 VVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHP  422 (472)
Q Consensus       343 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p  422 (472)
                      +++.+..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|||
T Consensus       311 ~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P  390 (476)
T 3e6i_A          311 VIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKP  390 (476)
T ss_dssp             HTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCG
T ss_pred             hcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCc
Confidence            99888889999999999999999999999999997678999999999999999999999999999999999999999999


Q ss_pred             CccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          423 ERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       423 ~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||+++++..   ..+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       391 eR~l~~~~~~---~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  437 (476)
T 3e6i_A          391 EHFLNENGKF---KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHF  437 (476)
T ss_dssp             GGGBCTTSSB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             hhhcCCCCCc---cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhc
Confidence            9999865432   2456799999999999999999999999999999987


No 8  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=4.7e-74  Score=552.52  Aligned_cols=420  Identities=25%  Similarity=0.426  Sum_probs=335.2

Q ss_pred             CCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ++.+.||||+++|++||++.+ .++++..+.+++++||+||++++++.++++|+||+.+++|+.+....|..++......
T Consensus         7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~   86 (476)
T 1po5_A            7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD   86 (476)
T ss_dssp             --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred             CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence            344689999999999999988 6788999999999999999999999899999999999999976655666544322111


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhcccc--ccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSL--NLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~--~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      ... +..+ ++..+|+.|+++|+++.+ .|+..  ..+.+ +.+.+.++++++.+....++.+|+.+++..+++|+|+.+
T Consensus        87 ~~~-~~~~-l~~~~g~~w~~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~  163 (476)
T 1po5_A           87 PIF-QGYG-VIFANGERWRALRRFSLA-TMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI  163 (476)
T ss_dssp             SCC-SSCC-CCCSSHHHHHHHHHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred             hhc-CCCc-eEecCCcHHHHHHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence            111 2234 445689999999998887 77766  34566 899999999999997655678999999999999999999


Q ss_pred             HhcCCCCCCcccchhHHHHHHHHHHHHHhCC---C--cccchhhh-cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          188 LWGSSLHGEERSSVGVEFRQVVGEIVEMLGK---P--NISDLFPT-LAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKI  261 (472)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (472)
                      +||.+++..+     .++....+.+......   .  .+...+|+ +.+++  ...++..+..+.+.+++.+.++++++.
T Consensus       164 ~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~  236 (476)
T 1po5_A          164 VFGKRFDYKD-----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSVEKHRAT  236 (476)
T ss_dssp             HHSSCCCTTC-----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HcCCCCCCCC-----HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999886432     2233333333322211   1  11224554 22222  112455566677888888888887653


Q ss_pred             hHhhhhhcccccccccHHHHHHHHhhc--CCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHH
Q 048742          262 DAAKGQISKQNEENKDFLHFLLELKQQ--GEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQE  339 (472)
Q Consensus       262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  339 (472)
                      ..      .  ....|+++.|+.....  ...+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|
T Consensus       237 ~~------~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E  308 (476)
T 1po5_A          237 LD------P--SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE  308 (476)
T ss_dssp             CC------T--TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             cC------C--CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            21      0  2346999999865432  112345899999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCC
Q 048742          340 LDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLE  419 (472)
Q Consensus       340 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  419 (472)
                      ++++++.++.++++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       309 i~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~  388 (476)
T 1po5_A          309 IEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT  388 (476)
T ss_dssp             HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTS
T ss_pred             HHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccc
Confidence            99999877779999999999999999999999999997668999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          420 FHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       420 f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||||+++++...   .+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       389 F~PeR~l~~~~~~~---~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  438 (476)
T 1po5_A          389 FNPGHFLDANGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF  438 (476)
T ss_dssp             CCGGGGBCTTSCBC---CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             cCchhhCCCCCCcc---CCccccCCCCccccCcchHHHHHHHHHHHHHHHhce
Confidence            99999997554321   345799999999999999999999999999999986


No 9  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=4.5e-74  Score=554.92  Aligned_cols=417  Identities=21%  Similarity=0.377  Sum_probs=337.4

Q ss_pred             cCCCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCC
Q 048742           30 KSRTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRD  104 (472)
Q Consensus        30 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~  104 (472)
                      ..++.+.+|||+++|++||++.+     .++++..+.+++++||+||++++++.++++|+||+++++|+.+. ..|..++
T Consensus        19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~   97 (482)
T 3k9v_A           19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRL   97 (482)
T ss_dssp             CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCC
T ss_pred             ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCC
Confidence            44677889999999999999876     24678999999999999999999999999999999999999884 4566554


Q ss_pred             Ccchh--hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh---cCCccchHHHHHH
Q 048742          105 PPASA--LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK---VGSPINLGEQMFL  178 (472)
Q Consensus       105 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~---~~~~~d~~~~~~~  178 (472)
                      .....  .....+....++..+|+.|+++|+.+.+.+++...++.+ +.+.+.++.+++.+...   .++++|+.+++..
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~  177 (482)
T 3k9v_A           98 EIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNK  177 (482)
T ss_dssp             CCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHH
T ss_pred             CchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence            33211  111112223455678999999999999855678888888 99999999999999865   2568999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcc---cchhHHHHHHHHHHHHHhCCCcccchhh--hcccccchhhhHHHHHHHHHHHHHHHH
Q 048742          179 AILNVVMNMLWGSSLHGEER---SSVGVEFRQVVGEIVEMLGKPNISDLFP--TLAWLDLQGIESKTKKLVLWFDRIFDS  253 (472)
Q Consensus       179 ~~~~~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~~~~~~~~  253 (472)
                      +++|+|+.++||.+++..+.   +.. .++.+.+..+......   ...+|  +..++.. ...+...+..+.+.+++.+
T Consensus       178 ~t~dvi~~~~fG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~~-~~~~~~~~~~~~~~~~~~~  252 (482)
T 3k9v_A          178 WSFESICLVLYEKRFGLLQKETEEEA-LTFITAIKTMMSTFGK---MMVTPVELHKRLNT-KVWQAHTLAWDTIFKSVKP  252 (482)
T ss_dssp             HHHHHHHHHHHSCCCCSSSTTSTTSS-HHHHHHHHHHHTTGGG---GSSSCHHHHHHHTC-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccccCCCCCCcchHH-HHHHHHHHHHHHHHHH---HHhhhHHHHHhcCC-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865432   222 5566666655443321   11222  1122211 2223444555667777777


Q ss_pred             HHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHH
Q 048742          254 VIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIM  333 (472)
Q Consensus       254 ~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  333 (472)
                      .++++++....        ....|++..++..       ..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       253 ~i~~r~~~~~~--------~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q  317 (482)
T 3k9v_A          253 CIDNRLQRYSQ--------QPGADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQ  317 (482)
T ss_dssp             HHHHHHHHTTT--------CTTSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred             HHHHHHHHhcc--------CCchHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHH
Confidence            88777653311        2346888888764       24899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCC
Q 048742          334 RKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEA  413 (472)
Q Consensus       334 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  413 (472)
                      +|+++|++++++++..++++++++||||+|||+|+||++|+++.. +|++.+|++++||.|||||.|.++.+++|+||++
T Consensus       318 ~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~  396 (482)
T 3k9v_A          318 RRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN  396 (482)
T ss_dssp             HHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEE-EEECSSCEEETTEEECTTCEEEEECSGGGGCTTT
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCc-ccccCCceeeCCEEECCCCEEEEccccccCCCcc
Confidence            999999999998888899999999999999999999999999985 7999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          414 WQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       414 ~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||++||||||++++++    ..+..|+|||.|+|.|+|++||++|++++++.||++|
T Consensus       397 ~~~p~~F~PeRfl~~~~~----~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f  451 (482)
T 3k9v_A          397 FEDSHKFRPERWLQKEKK----INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY  451 (482)
T ss_dssp             CSSTTSCCGGGGTCTTSC----CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             CCCcCccCccccCCCCCC----CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhc
Confidence            999999999999986532    3566899999999999999999999999999999986


No 10 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=5.3e-74  Score=552.60  Aligned_cols=423  Identities=26%  Similarity=0.448  Sum_probs=329.5

Q ss_pred             CCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      ++.+.||||+++|++||++.+ .++++..+.+++++||+||++++++.++++|+||+.+++|+.+....|..++......
T Consensus         8 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~   87 (477)
T 1r9o_A            8 GRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE   87 (477)
T ss_dssp             -CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred             CCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence            334689999999999999988 4678899999999999999999999899999999999999976655565543221111


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhcccc--ccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSL--NLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNM  187 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~--~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~  187 (472)
                      ... +..+ ++..+|+.|+++|+++.+ .|+..  .++.+ +.+.+.++++++.+....++++|+.+++..+++|+|+.+
T Consensus        88 ~~~-~~~~-l~~~~g~~w~~~Rr~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~  164 (477)
T 1r9o_A           88 RAN-RGFG-IVFSNGKKWKEIRRFSLM-TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI  164 (477)
T ss_dssp             TTT-CTTS-STTCCHHHHHHHHHHHHH-HHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHH
T ss_pred             hcc-CCCc-eEecCChHHHHHHHHHHH-HHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence            111 1233 445689999999998887 77766  44667 999999999999997654678999999999999999999


Q ss_pred             HhcCCCCCCcccchhHHHHHHHHHHHHHhCCC--cccchhhhc-ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          188 LWGSSLHGEERSSVGVEFRQVVGEIVEMLGKP--NISDLFPTL-AWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      +||.+++..+ +.. .++.+.+..........  .+...+|++ .+++  ...++..+..+.+.+++.+.++++++... 
T Consensus       165 ~fG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-  239 (477)
T 1r9o_A          165 IFHKRFDYKD-QQF-LNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILEKVKEHQESMD-  239 (477)
T ss_dssp             HHSCCCCTTC-HHH-HHHHHHHHHHHHHHTCCBC-------CCCSCCT--TCHHHHHHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred             HccCcCCCCC-HHH-HHHHHHHHHHHHhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence            9999886432 222 34444444444322211  123345642 2221  11245556667788888888888775321 


Q ss_pred             hhhhcccccccccHHHHHHHHhhc--CCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQ--GEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDE  342 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  342 (472)
                           .  ....|+++.|+.....  ...+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|+++
T Consensus       240 -----~--~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  312 (477)
T 1r9o_A          240 -----M--NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIER  312 (477)
T ss_dssp             -----T--TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             -----C--CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence                 0  2347999999865432  122446899999999999999999999999999999999999999999999999


Q ss_pred             hhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCC
Q 048742          343 VVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHP  422 (472)
Q Consensus       343 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p  422 (472)
                      +++.+..++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|||
T Consensus       313 ~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~P  392 (477)
T 1r9o_A          313 VIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDP  392 (477)
T ss_dssp             HTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCG
T ss_pred             hcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCc
Confidence            99877789999999999999999999999999997668999999999999999999999999999999999999999999


Q ss_pred             CccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          423 ERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       423 ~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||+++++...   .+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       393 eR~l~~~~~~~---~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  439 (477)
T 1r9o_A          393 HHFLDEGGNFK---KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNF  439 (477)
T ss_dssp             GGGBCTTSCBC---CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             cceECCCCCcC---ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            99997543321   345799999999999999999999999999999986


No 11 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=4.4e-74  Score=556.61  Aligned_cols=413  Identities=26%  Similarity=0.440  Sum_probs=327.3

Q ss_pred             cCCCCCCCCCCCCCccccccccC-CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           30 KSRTPPLPPGPLGLPVLGNLLSI-EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        30 ~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      ..++.+.||||++      ++.+ .++++..+.+++++||+||++++++.++++|+||+.+++|+.++...|+.++....
T Consensus        24 ~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~   97 (496)
T 3qz1_A           24 KLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS   97 (496)
T ss_dssp             -----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred             hccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence            3456789999986      3443 67899999999999999999999999999999999999999888777777665443


Q ss_pred             hhhhccCCcceEeCCC-ChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPN-GPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMN  186 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~-~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~  186 (472)
                      ......+..+++ ..+ |+.|+++|+++.+ .|+...++.+ +.+.+.++++++.+....++++|+.+++..+++|+|+.
T Consensus        98 ~~~~~~~~~~l~-~~~~g~~w~~~Rr~~~~-~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~  175 (496)
T 3qz1_A           98 YKLVSQRCQDIS-LGDYSLLWKAHKKLTRS-ALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICY  175 (496)
T ss_dssp             TTTSCTTCCCSS-SSCCSHHHHHHHHHHHH-HHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTT
T ss_pred             HHHhcCCCCceE-ECCCCHHHHHHHHHHHH-HHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence            322222322444 445 9999999999998 7776677778 99999999999999875577999999999999999999


Q ss_pred             HHhcCCCCCCcccchhHHHHHHHHHHHHHhCC--CcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 048742          187 MLWGSSLHGEERSSVGVEFRQVVGEIVEMLGK--PNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAA  264 (472)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (472)
                      ++||.    .+++.. ..+.+.+.........  ..+...+|++.+++. ...++..+..+.+.+++.+.++++++... 
T Consensus       176 ~~fG~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  248 (496)
T 3qz1_A          176 LTFGN----KEDTLV-HAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESMV-  248 (496)
T ss_dssp             TSTTC----CCHHHH-HHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-
T ss_pred             HhcCC----CCChHH-HHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            99998    112111 2333333332222221  123345676655542 22455667777888888888887766431 


Q ss_pred             hhhhcccccccccHHHHHHHHhhcCC--C-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          265 KGQISKQNEENKDFLHFLLELKQQGE--D-KTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       265 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~-~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                           +  ....|+++.|++......  . +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       249 -----~--~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  321 (496)
T 3qz1_A          249 -----A--GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD  321 (496)
T ss_dssp             -----S--SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             -----C--CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence                 1  345789999997754321  1 12689999999999999999999999999999999999999999999999


Q ss_pred             HhhcC----CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCC
Q 048742          342 EVVGN----GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       342 ~~~~~----~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      +++++    +..+ ++++++||||+|||+|+||++|+++..++|++.+|++++||.|||||.|.++.+++||||++|+||
T Consensus       322 ~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  400 (496)
T 3qz1_A          322 RELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQP  400 (496)
T ss_dssp             HHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSST
T ss_pred             HHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCc
Confidence            99986    4556 999999999999999999999999987789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          418 LEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       418 ~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++||||||++++.       ...++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       401 ~~F~PeR~l~~~~-------~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  448 (496)
T 3qz1_A          401 HEFRPDRFLEPGA-------NPSALAFGCGARVCLGESLARLELFVVLARLLQAF  448 (496)
T ss_dssp             TSCCCCCCC---C-------CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCCcccccCCCC-------CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence            9999999997531       12799999999999999999999999999999987


No 12 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=8.7e-75  Score=555.32  Aligned_cols=411  Identities=22%  Similarity=0.380  Sum_probs=335.1

Q ss_pred             CCCCCCCCCC-CccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           33 TPPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        33 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      .++.||+|++ +|++||++.+.++++.++.++++|||+||++++++.++++|+||+.+++++.++...+..++.......
T Consensus         9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~   88 (461)
T 3ld6_A            9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT   88 (461)
T ss_dssp             -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred             CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence            3567888875 999999999999999999999999999999999999999999999999999987777765544333333


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhc
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWG  190 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG  190 (472)
                      ..+| .+.++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+.+  +..+|+.+.+..+++++++.++||
T Consensus        89 ~~~g-~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~fG  164 (461)
T 3ld6_A           89 PVFG-KGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHG  164 (461)
T ss_dssp             HHHC-TTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             ccCC-CccccCCCcHHHHHHHHhccc-cccHHHHhhhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHHHcC
Confidence            3333 455667789999999999988 8999999988 8888888888887754  467899999999999999999999


Q ss_pred             CCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcc
Q 048742          191 SSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISK  270 (472)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  270 (472)
                      .++.....    ..+......+.....  .....+|.+  +.. ....+..++.+.+.+++.+.+++++...        
T Consensus       165 ~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------  227 (461)
T 3ld6_A          165 KEIRSQLN----EKVAQLYADLDGGFS--HAAWLLPGW--LPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQ--------  227 (461)
T ss_dssp             HHHHHTCC----HHHHHHHHHHHTTSS--HHHHHSCTT--SCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC--------
T ss_pred             cchhhhhh----hhhhhhhhhhhhhhh--hHHHhhhhh--ccC-cHHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence            88754433    233333332221111  111122221  112 2234455666777788888877765432        


Q ss_pred             cccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-cc
Q 048742          271 QNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNG-SI  349 (472)
Q Consensus       271 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~  349 (472)
                        ....|+++.|+++..+.  +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++++ ..
T Consensus       228 --~~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~  303 (461)
T 3ld6_A          228 --EKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPP  303 (461)
T ss_dssp             --CCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCC
T ss_pred             --CCCcchhhhhHHhhhcc--cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccc
Confidence              45679999999765532  56799999999999999999999999999999999999999999999999999764 45


Q ss_pred             eecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCcccccc
Q 048742          350 VEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKEL  429 (472)
Q Consensus       350 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~  429 (472)
                      ++.+++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|.++.+++|+||++|+||++||||||++++
T Consensus       304 ~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~  382 (461)
T 3ld6_A          304 LTYDQLKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN  382 (461)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSCCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCC
T ss_pred             hhHHHHHHHhhhhheeeeccccCCchhcc-ccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCC
Confidence            78888999999999999999999999986 58899999999999999999999999999999999999999999999865


Q ss_pred             CCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          430 GKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       430 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +.   ...+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       383 ~~---~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  422 (461)
T 3ld6_A          383 PA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLY  422 (461)
T ss_dssp             HH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             cc---cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhC
Confidence            43   22456799999999999999999999999999999987


No 13 
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=2.2e-74  Score=557.20  Aligned_cols=419  Identities=24%  Similarity=0.424  Sum_probs=325.3

Q ss_pred             CCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhc-cccccCCCCcchhhhh
Q 048742           34 PPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQ-DAIFANRDPPASALVT  112 (472)
Q Consensus        34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~-~~~~~~~~~~~~~~~~  112 (472)
                      .+.||||+++|++||++.+.++++.++.+|+++||+||++++++.++++|+||+.+++|+.++ ...|..+........ 
T Consensus        13 ~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~-   91 (485)
T 3nxu_A           13 KLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-   91 (485)
T ss_dssp             HHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG-
T ss_pred             hCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc-
Confidence            357899999999999999988899999999999999999999999999999999999999876 455655543322111 


Q ss_pred             ccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHHHHHHHh
Q 048742          113 SYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                       .  .+.++..+|+.|+++|+++++ .|+..+++.+ +.+.+.++++++.+...  .++++|+.+++..+++|+|+.++|
T Consensus        92 -~--~~~l~~~~g~~w~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~f  167 (485)
T 3nxu_A           92 -M--KSAISIAEDEEWKRLRSLLSP-TFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSF  167 (485)
T ss_dssp             -G--GGSTTTCCHHHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             -c--ccCccccCCcHHHHHHhhcCh-hcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHc
Confidence             1  133456789999999999997 8999999999 99999999999998653  378999999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCC---cccchhhhccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKP---NISDLFPTLAWLD-LQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      |.+++..+.+.  ..+.+............   .....+|++.++. ............+.+.+.+.+.++++.+.    
T Consensus       168 G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  241 (485)
T 3nxu_A          168 GVNIDSLNNPQ--DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED----  241 (485)
T ss_dssp             SCCCCGGGCTT--CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             CCccccccCCC--cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----
Confidence            99987654332  23333222211100000   0111223221110 00000001122233333444444333211    


Q ss_pred             hhhcccccccccHHHHHHHHhhcCC--CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGE--DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                           ......|+++.++++.....  .+..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++
T Consensus       242 -----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~  316 (485)
T 3nxu_A          242 -----TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV  316 (485)
T ss_dssp             -----C---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             -----cCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence                 11345799999998764321  13468999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCC
Q 048742          344 VGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPE  423 (472)
Q Consensus       344 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  423 (472)
                      ++.+..++++++++||||+|||+|+||++|+++. ++|++.+|++++||.|||||.|.++.+++||||++|+||++||||
T Consensus       317 ~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~Pe  395 (485)
T 3nxu_A          317 LPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE  395 (485)
T ss_dssp             STTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGG
T ss_pred             hccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCcc
Confidence            9888889999999999999999999999999987 579999999999999999999999999999999999999999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||+++++.   ...+..|+|||.|+|.|+|++||++|++++++.||++|
T Consensus       396 R~l~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  441 (485)
T 3nxu_A          396 RFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF  441 (485)
T ss_dssp             GGSHHHHT---TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTE
T ss_pred             ccCCCccc---cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhc
Confidence            99976432   22456799999999999999999999999999999987


No 14 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.2e-72  Score=547.49  Aligned_cols=409  Identities=22%  Similarity=0.346  Sum_probs=328.2

Q ss_pred             CCCCCCCCCCCCccccccccCCC----ChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcc
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEP----DFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPA  107 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~----~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~  107 (472)
                      ++.+.||||+++|++||++.+..    +.+..+.+|+++||+||++++++.++++|+||+.+++++++.  .++.+....
T Consensus        42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~  119 (503)
T 3s79_A           42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSK  119 (503)
T ss_dssp             ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCH
T ss_pred             hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhh
Confidence            45678999999999999998743    345688899999999999999999999999999999999654  455443322


Q ss_pred             hh-hhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccchHHHHHHHHHHH
Q 048742          108 SA-LVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPINLGEQMFLAILNV  183 (472)
Q Consensus       108 ~~-~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~~  183 (472)
                      .. .....++.+.++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+...  .++.+|+.+++..+++++
T Consensus       120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v  198 (503)
T 3s79_A          120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFMK-ALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT  198 (503)
T ss_dssp             HHHHHHTCTTSSSTTCCCHHHHHHHHHHHHH-HTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred             hhhhhhccCCCceeeCCCccHHHHHHHhhhH-hhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence            21 1222333555667789999999999998 8898888888 88999999999888653  256899999999999999


Q ss_pred             HHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 048742          184 VMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDA  263 (472)
Q Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (472)
                      ++.++||.+++..  +.. ..+.+.++.+......   ...++.+     .+..++..+..+.+.+++.+.++++++...
T Consensus       199 i~~~~fG~~~~~~--~~~-~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (503)
T 3s79_A          199 SNTLFLRIPLDES--AIV-VKIQGYFDAWQALLIK---PDIFFKI-----SWLYKKYEKSVKDLKDAIEVLIAEKRRRIS  267 (503)
T ss_dssp             HHHHHTCCCCCHH--HHH-HHHHHHHHHHHHHTTC---CHHHHHS-----GGGTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCcccCch--hHH-HHHHHHHHHHHHHhcC---cHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987521  111 2333333332222211   1111111     122355667778888889999988776542


Q ss_pred             hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 048742          264 AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEV  343 (472)
Q Consensus       264 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  343 (472)
                      ...    ......|+++.++++.+    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       268 ~~~----~~~~~~d~l~~ll~~~~----~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v  339 (503)
T 3s79_A          268 TEE----KLEECMDFATELILAEK----RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTV  339 (503)
T ss_dssp             TCT----TTTTTCCHHHHHHHHHH----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             ccc----ccchHHHHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            211    11234599999998765    3358999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCC
Q 048742          344 VGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPE  423 (472)
Q Consensus       344 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~  423 (472)
                      ++ +..++++++++||||+|||+|+||++|+++... |.+.+|++++||.|||||.|.++.+++|+| ++|+||++||||
T Consensus       340 ~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~Pe  416 (503)
T 3s79_A          340 IG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLE  416 (503)
T ss_dssp             TT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEE-EECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGG
T ss_pred             hC-CCCCCHHHHhcCHHHHHHHHhhhccCCCccccc-ccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChh
Confidence            98 567899999999999999999999999999874 889999999999999999999999999998 999999999999


Q ss_pred             ccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          424 RFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       424 R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||++..       ....|+|||+|+|.|+|++||.+|++++++.||++|
T Consensus       417 Rf~~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  458 (503)
T 3s79_A          417 NFAKNV-------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF  458 (503)
T ss_dssp             GGSSCC-------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTE
T ss_pred             hcCCCC-------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhe
Confidence            999642       334799999999999999999999999999999987


No 15 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.2e-71  Score=538.28  Aligned_cols=422  Identities=22%  Similarity=0.282  Sum_probs=330.6

Q ss_pred             cCCCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCC
Q 048742           30 KSRTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRD  104 (472)
Q Consensus        30 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~  104 (472)
                      +.++.+.+|||+..++. +++.+     .++++..+.++++|||+||++++++.++|+|+||+++++|+.+.. .|+.++
T Consensus         4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~   81 (487)
T 3n9y_A            4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF   81 (487)
T ss_dssp             CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred             CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence            34566789999988776 55544     236788999999999999999999999999999999999998764 565554


Q ss_pred             Ccchhh--hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc------CCccchHHH
Q 048742          105 PPASAL--VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV------GSPINLGEQ  175 (472)
Q Consensus       105 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~------~~~~d~~~~  175 (472)
                      ......  ....+....++..+|+.|+++|+.+.+.+|+...++.+ +.+.+.++++++.+....      ++.+|+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~  161 (487)
T 3n9y_A           82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD  161 (487)
T ss_dssp             CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred             CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence            332211  11122234456778999999999999866999999999 999999999999987632      347999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCcccch--hHHHHHHHHHHHHHhCCCcccchhhh-c-ccccchhhhHHHHHHHHHHHHHH
Q 048742          176 MFLAILNVVMNMLWGSSLHGEERSSV--GVEFRQVVGEIVEMLGKPNISDLFPT-L-AWLDLQGIESKTKKLVLWFDRIF  251 (472)
Q Consensus       176 ~~~~~~~~i~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-l-~~~~~~~~~~~~~~~~~~~~~~~  251 (472)
                      +..+++|+|+.++||.+++..+.+..  ..++.+.+..+......   ...+|. + .++. ....+...+..+.+.+.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~-~~~~~~~~~~~~~~~~~~  237 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR-TKTWKDHVAAWDVIFSKA  237 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc-cHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976543221  13444554444433321   122332 1 1211 111223333444556666


Q ss_pred             HHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChH
Q 048742          252 DSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSE  331 (472)
Q Consensus       252 ~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~  331 (472)
                      .+.++++.+......   .......|+++.+++.       ..++++++.+++.++++||+|||+++++|++++|++||+
T Consensus       238 ~~~i~~~~~~~~~~~---~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  307 (487)
T 3n9y_A          238 DIYTQNFYWELRQKG---SVHHDYRGILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK  307 (487)
T ss_dssp             HHHHHHHHHHHHHHC---CCCSSCCCHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHhcC---CcccchHHHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChH
Confidence            677766655432221   1113457899999863       248999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCC
Q 048742          332 IMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDP  411 (472)
Q Consensus       332 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~  411 (472)
                      +|+||++|++++++.+..++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||
T Consensus       308 ~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~  386 (487)
T 3n9y_A          308 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP  386 (487)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred             HHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCc
Confidence            9999999999998876667799999999999999999999999986 479999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          412 EAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       412 ~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|+||++|+||||++.+++    ..+..|+|||.|+|.|+|++||++|++++++.||++|
T Consensus       387 ~~~~dp~~F~PeR~l~~~~~----~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f  443 (487)
T 3n9y_A          387 TFFFDPENFDPTRWLSKDKN----ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF  443 (487)
T ss_dssp             TTSSSTTSCCGGGGTCSCTT----SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             ccCCCcccCChhhcCCCCCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999975431    2456799999999999999999999999999999986


No 16 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=9.4e-72  Score=531.11  Aligned_cols=403  Identities=23%  Similarity=0.363  Sum_probs=325.2

Q ss_pred             CCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      ++.+.||||+++|++||++.+..+++ ++.+++++||+||+++++|.+.++|+||+.+++|+.++...|+....  ....
T Consensus         9 ~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~--~~~~   85 (444)
T 2ve3_A            9 NSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP--LSTR   85 (444)
T ss_dssp             CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC--HHHH
T ss_pred             CCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh--HHHH
Confidence            55678999999999999988766677 88899999999999998888899999999999999887555553221  1111


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhc
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWG  190 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG  190 (472)
                      ..+|..+ ++..+|+.|+++|+++.+ .|+...++.+ +.+.+.++++++.+..  ++.+|+.+++..+++++++.++||
T Consensus        86 ~~~g~~~-l~~~~g~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~~~fG  161 (444)
T 2ve3_A           86 ILLGPNA-LATQMGEIHRSRRKILYQ-AFLPRTLDSYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAATLFMG  161 (444)
T ss_dssp             HHHCTTS-GGGCCHHHHHHHHHHHHG-GGCHHHHHTTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhCccc-cccCCchHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHHHHcC
Confidence            1123223 345689999999999987 8999999999 9999999999999865  678999999999999999999999


Q ss_pred             CCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcc
Q 048742          191 SSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISK  270 (472)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  270 (472)
                       +....+ .    ++.+.+..+......  +...+|..       ..++..+..+.+.+++.+.++++++..        
T Consensus       162 -~~~~~~-~----~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~~~--------  218 (444)
T 2ve3_A          162 -EKVSQN-P----QLFPWFETYIQGLFS--LPIPLPNT-------LFGKSQRARALLLAELEKIIKARQQQP--------  218 (444)
T ss_dssp             -HHHHSC-T----THHHHHHHHHHHHSS--CCCCSTTS-------HHHHHHHHHHHHHHHHHHHHHHHHTSC--------
T ss_pred             -CCcccH-H----HHHHHHHHHHHHHhc--CCccCCCc-------HHHHHHHHHHHHHHHHHHHHHHHhcCC--------
Confidence             332221 2    222333333222221  11112221       123445566777888888888776531        


Q ss_pred             cccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcce
Q 048742          271 QNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIV  350 (472)
Q Consensus       271 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  350 (472)
                        ....|+++.|+++....  +..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++++ .+
T Consensus       219 --~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~  293 (444)
T 2ve3_A          219 --PSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-EL  293 (444)
T ss_dssp             --CCCSSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CC
T ss_pred             --CCccCHHHHHHhccccC--CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CC
Confidence              34679999999765321  45689999999999999999999999999999999999999999999999988754 78


Q ss_pred             ecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccC
Q 048742          351 EESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELG  430 (472)
Q Consensus       351 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~  430 (472)
                      +++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++++
T Consensus       294 ~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~  372 (444)
T 2ve3_A          294 TAETLKKMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGS  372 (444)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTST
T ss_pred             ChhhhhcChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCc
Confidence            9999999999999999999999999975 699999999999999999999999999999999999999999999997542


Q ss_pred             CccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          431 KLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       431 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .  ....+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       373 ~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  412 (444)
T 2ve3_A          373 A--THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF  412 (444)
T ss_dssp             T--TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             c--cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhC
Confidence            1  122445699999999999999999999999999999986


No 17 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=3.3e-71  Score=529.06  Aligned_cols=409  Identities=21%  Similarity=0.326  Sum_probs=312.9

Q ss_pred             CCCCC-CCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhc
Q 048742           35 PLPPG-PLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTS  113 (472)
Q Consensus        35 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~  113 (472)
                      +.||| |.++|++||++.+..+++.++.+++++||+||++++++.++++|+||+.+++|+.+++..|+.++.... ....
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~-~~~~   82 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPF-MTPI   82 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGG-GHHH
T ss_pred             CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhH-HHhh
Confidence            67887 889999999999888899999999999999999999998999999999999999876656665543321 1111


Q ss_pred             cCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCC
Q 048742          114 YGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSS  192 (472)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~  192 (472)
                      +| .+ ++ .+++.|+++|+.+.+ .|+..+++.+ +.+.+.++++++.+..  ++.+|+.+++..+++++++.++||.+
T Consensus        83 ~g-~~-~~-~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~  156 (455)
T 2cib_A           83 FG-EG-VV-FDASPERRKEMLHNA-ALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGKK  156 (455)
T ss_dssp             HC------------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred             cC-Cc-cc-cCcHHHHHHHhhhcc-ccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCCC
Confidence            22 22 32 469999999999987 9999999988 9999999999888643  45799999999999999999999998


Q ss_pred             CCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccc
Q 048742          193 LHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQN  272 (472)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  272 (472)
                      ++....    .++.+.+..+....  ..+...+|++.   .. ..++..+..+.+.+++.+.++++++....     .  
T Consensus       157 ~~~~~~----~~~~~~~~~~~~~~--~~~~~~~p~l~---~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-----~--  219 (455)
T 2cib_A          157 FRDQLD----GRFAKLYHELERGT--DPLAYVDPYLP---IE-SFRRRDEARNGLVALVADIMNGRIANPPT-----D--  219 (455)
T ss_dssp             HHTTCC----HHHHHHHHHHHTTC--CGGGGTCTTCS---CH-HHHHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred             cchhhh----HHHHHHHHHHHhhh--hHHHHhcccCC---Ch-hHHHHHHHHHHHHHHHHHHHHHHHhcccC-----C--
Confidence            754322    34444444442211  11222344321   11 12344556677888888888887653210     0  


Q ss_pred             cccccHHHHHHHHhhcCCCCCC-CCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCccee
Q 048742          273 EENKDFLHFLLELKQQGEDKTS-LSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVE  351 (472)
Q Consensus       273 ~~~~d~l~~ll~~~~~~~~~~~-l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  351 (472)
                      ....|+++.|+++....  +.. ++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++++..++
T Consensus       220 ~~~~dll~~ll~~~~~~--~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  297 (455)
T 2cib_A          220 KSDRDMLDVLIAVKAET--GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVS  297 (455)
T ss_dssp             --CCCHHHHHHHCBCTT--SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHH
T ss_pred             CCcccHHHHHHHhhhhc--CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            12349999999765322  334 899999999999999999999999999999999999999999999999998767789


Q ss_pred             cccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCC
Q 048742          352 ESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGK  431 (472)
Q Consensus       352 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~  431 (472)
                      ++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++++..
T Consensus       298 ~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~  376 (455)
T 2cib_A          298 FHALRQIPQLENVLKETLRLHPPLIIL-MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE  376 (455)
T ss_dssp             HHTTSCCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCH
T ss_pred             HHHHhcCHHHHHHHHHHHhcCCccccc-ceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcc
Confidence            999999999999999999999999864 7999999999999999999999999999999999999999999999965321


Q ss_pred             ccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          432 LEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       432 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .  ...+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       377 ~--~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  415 (455)
T 2cib_A          377 D--LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY  415 (455)
T ss_dssp             H--HHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             c--ccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhe
Confidence            1  11245799999999999999999999999999999986


No 18 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.5e-70  Score=523.87  Aligned_cols=414  Identities=20%  Similarity=0.306  Sum_probs=324.4

Q ss_pred             CCCCCCCCCCccccccccCC-CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhh
Q 048742           34 PPLPPGPLGLPVLGNLLSIE-PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVT  112 (472)
Q Consensus        34 ~~~ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~  112 (472)
                      .+.||||+++|++||++.+. ++++..+.+++++||+||++++++.+.++|+||+.+++|+.+.  .|............
T Consensus         2 ~~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~   79 (470)
T 2ij2_A            2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVR   79 (470)
T ss_dssp             -CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHH
T ss_pred             CCCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHH
Confidence            35689999999999999885 4788899999999999999999999999999999999999653  23221111110011


Q ss_pred             ccCCcceEeC-CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-CCccchHHHHHHHHHHHHHHHHh
Q 048742          113 SYGLHDIVWM-PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-GSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       113 ~~~~~~~~~~-~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                      .....++++. .+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+.... ++.+|+.+++..+++|+|+.++|
T Consensus        80 ~~~~~~l~~~~~~g~~w~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f  158 (470)
T 2ij2_A           80 DFAGDGLFTSWTHEKNWKKAHNILLP-SFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF  158 (470)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHHGG-GGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCceEEcCCCchHHHHHHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence            1112344433 489999999999998 8999999999 999999999999987532 46899999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhc
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQIS  269 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  269 (472)
                      |.+++..+.+.. ..+.+.+............  ..|++.++. ....+...+..+.+.+++.+.+++|++..       
T Consensus       159 G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------  227 (470)
T 2ij2_A          159 NYRFNSFYRDQP-HPFITSMVRALDEAMNKLQ--RANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKASG-------  227 (470)
T ss_dssp             SCCCCGGGCSSC-CHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             CCcccccccCCC-CHHHHHHHHHHHHHHHHHh--hhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence            999865422222 3344444433322211000  012222221 12234455566777888888888776532       


Q ss_pred             ccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcc
Q 048742          270 KQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSI  349 (472)
Q Consensus       270 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  349 (472)
                         ....|+++.|+++.+.. ++..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++++ .
T Consensus       228 ---~~~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~  302 (470)
T 2ij2_A          228 ---EQSDDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-V  302 (470)
T ss_dssp             ---CCCSSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS-S
T ss_pred             ---cCchhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-C
Confidence               34579999999764321 244699999999999999999999999999999999999999999999999998764 5


Q ss_pred             eecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccC-eecCCCCEEEEeeecccCCCCCC-CCCCCCCCCcccc
Q 048742          350 VEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGG-YTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPERFLK  427 (472)
Q Consensus       350 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~  427 (472)
                      ++++++++||||+|||+|+||++|+++.. +|.+.+|++++| |.|||||.|.++.+++||||++| +||++|||||| +
T Consensus       303 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~  380 (470)
T 2ij2_A          303 PSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-E  380 (470)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-S
T ss_pred             CCHHHHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-C
Confidence            89999999999999999999999999985 698999999999 99999999999999999999999 99999999999 2


Q ss_pred             ccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          428 ELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       428 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      . .   ....+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       381 ~-~---~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  421 (470)
T 2ij2_A          381 N-P---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF  421 (470)
T ss_dssp             S-G---GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             C-C---CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHe
Confidence            1 1   112346799999999999999999999999999999986


No 19 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=5.4e-71  Score=529.95  Aligned_cols=406  Identities=21%  Similarity=0.384  Sum_probs=305.5

Q ss_pred             CCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhcc
Q 048742           35 PLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSY  114 (472)
Q Consensus        35 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~  114 (472)
                      ..||||+++|++||++.+..+++.++.++++ ||+||++++++.++++|+||+.+++|+.++  .|..+...........
T Consensus        23 eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~~   99 (467)
T 3dbg_A           23 EPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGLL   99 (467)
T ss_dssp             BCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------------
T ss_pred             CCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHhc
Confidence            3467999999999999998899999999988 999999999999999999999999999886  3422221111111112


Q ss_pred             CCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCC
Q 048742          115 GLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSL  193 (472)
Q Consensus       115 ~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~  193 (472)
                      |. ..++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+..  ++.+|+.+.+..+++++++.++||.++
T Consensus       100 g~-~~l~~~dg~~h~~~R~~l~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~~~  175 (467)
T 3dbg_A          100 GK-EGVATANGPLHRRQRRTIQP-AFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRGQY  175 (467)
T ss_dssp             -----------------CGGGHH-HHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCSSC
T ss_pred             CC-CCcccCCcHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCCcc
Confidence            21 33456789999999999988 8999999999 9999999999998864  678999999999999999999999987


Q ss_pred             CCCcccchhHHHHHHHHHHHHHhCCCcccchhhh--cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccc
Q 048742          194 HGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPT--LAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQ  271 (472)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  271 (472)
                      +..   .. ..+...+..+......   ...+|+  +.++.. ...++..+..+.+.+++.+.++++++..         
T Consensus       176 ~~~---~~-~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------  238 (467)
T 3dbg_A          176 MDE---RA-ERLCVALATVFRGMYR---RMVVPLGPLYRLPL-PANRRFNDALADLHLLVDEIIAERRASG---------  238 (467)
T ss_dssp             CHH---HH-HHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTCC---------
T ss_pred             cch---hH-HHHHHHHHHHHHHHHH---HhccchhhhhhCCC-hHhHHHHHHHHHHHHHHHHHHHHHHhcC---------
Confidence            642   11 4454554444432221   112332  122111 1123444555677778888887776522         


Q ss_pred             ccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCccee
Q 048742          272 NEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVE  351 (472)
Q Consensus       272 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  351 (472)
                       ....|+++.|+++.+..  +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+++++++ ..++
T Consensus       239 -~~~~dll~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~  314 (467)
T 3dbg_A          239 -QKPDDLLTALLEAKDDN--GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVA  314 (467)
T ss_dssp             -SSCCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCC
T ss_pred             -CCchHHHHHHHhhccCC--CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCC
Confidence             34579999999765432  3469999999999999999999999999999999999999999999999999875 6789


Q ss_pred             cccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCC
Q 048742          352 ESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGK  431 (472)
Q Consensus       352 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~  431 (472)
                      ++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|||+||+++++.
T Consensus       315 ~~~l~~l~yl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  393 (467)
T 3dbg_A          315 FEDVRKLRHTGNVIVEAMRLRPAVWVL-TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA  393 (467)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHSCSCCCE-EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT
T ss_pred             HHHHhhCHHHHHHHHHHhhcCCCcccc-ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc
Confidence            999999999999999999999999875 7999999999999999999999999999999999999999999999975432


Q ss_pred             ccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          432 LEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       432 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                         ...+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       394 ---~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  431 (467)
T 3dbg_A          394 ---NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY  431 (467)
T ss_dssp             ---TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             ---cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence               22456799999999999999999999999999999986


No 20 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=4.3e-70  Score=522.44  Aligned_cols=408  Identities=21%  Similarity=0.378  Sum_probs=335.9

Q ss_pred             CCCCCCCCC-CccccccccCCCChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh
Q 048742           34 PPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV  111 (472)
Q Consensus        34 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~  111 (472)
                      ++.||||++ +|++||++.+..+++.++.+++++|| +||++++++.++++|+||+.+++++.++...++.++...... 
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~-   80 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV-   80 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH-
T ss_pred             CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH-
Confidence            568898655 99999999988899999999999999 999999999999999999999999988777777665433221 


Q ss_pred             hccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHH-HHHHhcCCccchHHHHHHHHHHHHHHHHh
Q 048742          112 TSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVK-EVYKKVGSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~-~l~~~~~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                      ..+| .+.++..+++.|+++|+.+.+ .|+...++.+ +.+.++++++++ .+.. .++.+|+.+++..+++++++.++|
T Consensus        81 ~~~g-~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~f  157 (450)
T 3gw9_A           81 PVFG-EGVAYAAPYPRMREQLNFLAE-ELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCLF  157 (450)
T ss_dssp             HHHC-TTSGGGSCHHHHHHHHHHHHH-TTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred             HHhc-CCcccCCCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHHc
Confidence            1222 344455679999999999988 9999999999 999999999998 5532 246799999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhc
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQIS  269 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  269 (472)
                      |.+++....  . .++.+.+..+....  ..+...+|++.+++. ...++..+..+.+.+++.+.++++++....+    
T Consensus       158 G~~~~~~~~--~-~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----  227 (450)
T 3gw9_A          158 GEDLRKRLD--A-RRFAQLLAKMESSL--IPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEVNK----  227 (450)
T ss_dssp             CHHHHHHSC--H-HHHHHHHHHHHHTC--CGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             Ccchhhhhh--h-HHHHHHHHHHHhcc--ccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Confidence            988754221  1 45555555543322  223445676655543 2334566677788888899888887543111    


Q ss_pred             ccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHh--hChHHHHHHHHHHHHhhcCC
Q 048742          270 KQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEML--QHSEIMRKVQQELDEVVGNG  347 (472)
Q Consensus       270 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~Ei~~~~~~~  347 (472)
                        .....|+++.++++....  +..++++++.+++..+++||+|||+++++|++++|+  .||++|+++++|++++   +
T Consensus       228 --~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~  300 (450)
T 3gw9_A          228 --DSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---P  300 (450)
T ss_dssp             --SCCCCSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---C
T ss_pred             --CCccchHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---c
Confidence              135689999999875432  456999999999999999999999999999999999  9999999999999987   4


Q ss_pred             cceecccC-CCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccc
Q 048742          348 SIVEESHI-PKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFL  426 (472)
Q Consensus       348 ~~~~~~~l-~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l  426 (472)
                      +.++++++ ++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++|+||++|+||++|||||+.
T Consensus       301 ~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~  379 (450)
T 3gw9_A          301 AQLNYNNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE  379 (450)
T ss_dssp             SSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC
T ss_pred             CCCChHHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc
Confidence            55788898 99999999999999999999875 69999999999999999999999999999999999999999999932


Q ss_pred             cccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          427 KELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       427 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .         .+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       380 ~---------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f  416 (450)
T 3gw9_A          380 K---------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSY  416 (450)
T ss_dssp             S---------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHE
T ss_pred             C---------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHc
Confidence            1         245799999999999999999999999999999986


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=7.1e-71  Score=528.75  Aligned_cols=412  Identities=22%  Similarity=0.383  Sum_probs=330.1

Q ss_pred             CCCCCCCC-CCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           32 RTPPLPPG-PLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        32 ~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      .+.+.||| |+++|++||++.+..+++.++.+++++||+||+++++++++++|++|+.+++++.++...+.....+....
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhh
Confidence            45678998 99999999999998889999999999999999999999999999999999999988765554332222111


Q ss_pred             hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHh
Q 048742          111 VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLW  189 (472)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~f  189 (472)
                      ...+| .+..+..+|+.|+++|+++.+ .|+...++.+ +.+.+++.++++.+..  +..+|+.+.+..+++++++.++|
T Consensus        88 ~~~~g-~g~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~~~  163 (461)
T 3i3k_A           88 TPVFG-KGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLH  163 (461)
T ss_dssp             HHHHC-TTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHT
T ss_pred             hhhcC-CeeeeCCCcHHHHHHHHHHhh-hhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHHHc
Confidence            12223 344555679999999999998 8898889888 8899999988888754  34689999999999999999999


Q ss_pred             cCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhc
Q 048742          190 GSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQIS  269 (472)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  269 (472)
                      |.++.....    ..+.+....+....  ......+|.  ++... ..++..+..+.+.+++.+.++++++..       
T Consensus       164 G~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~P~--~l~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-------  227 (461)
T 3i3k_A          164 GKEIRSQLN----EKVAQLYADLDGGF--SHAAWLLPG--WLPLP-SFRRRDRAHREIKDIFYKAIQKRRQSQ-------  227 (461)
T ss_dssp             CHHHHHTCC----HHHHHHHHHHHTTS--SHHHHHSCT--TSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred             cHhhhhHHH----HHHHHHHHHHHhcc--ccchhhccc--ccCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence            987643322    23333333322111  111112332  22211 234455666777788888887765432       


Q ss_pred             ccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCc-
Q 048742          270 KQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGS-  348 (472)
Q Consensus       270 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-  348 (472)
                         ....|+++.+++...+.  +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.+. 
T Consensus       228 ---~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  302 (461)
T 3i3k_A          228 ---EKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP  302 (461)
T ss_dssp             ---CCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCC
T ss_pred             ---cccccHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCC
Confidence               34579999999765432  456999999999999999999999999999999999999999999999999998653 


Q ss_pred             ceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccc
Q 048742          349 IVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKE  428 (472)
Q Consensus       349 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~  428 (472)
                      .++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|+||++|+||++|||+||++.
T Consensus       303 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~  381 (461)
T 3i3k_A          303 PLTYDQLKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD  381 (461)
T ss_dssp             CCCHHHHHTCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSC
T ss_pred             CCCHHHHhcChHHHHHHHHHHhcCCCcccc-ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCC
Confidence            468899999999999999999999999764 7999999999999999999999999999999999999999999999975


Q ss_pred             cCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          429 LGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       429 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++.   ...+..|+|||+|+|.|+|++||.+|++++++.||++|
T Consensus       382 ~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f  422 (461)
T 3i3k_A          382 NPA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLY  422 (461)
T ss_dssp             CHH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHE
T ss_pred             CCC---CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence            432   12456799999999999999999999999999999986


No 22 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=9.1e-68  Score=506.69  Aligned_cols=393  Identities=20%  Similarity=0.320  Sum_probs=312.3

Q ss_pred             CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhc----cCCcceEeCCCChhHH
Q 048742           54 PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTS----YGLHDIVWMPNGPEWR  129 (472)
Q Consensus        54 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  129 (472)
                      +.++..+.+|+++||+||++++++.+.++|+||+++++|+.+.  .+..++.........    ..+.++++..+|+.|+
T Consensus        10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence            4578899999999999999999999999999999999999753  232222111111111    1123444456899999


Q ss_pred             HHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc--CCccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHH
Q 048742          130 QLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV--GSPINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFR  206 (472)
Q Consensus       130 ~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  206 (472)
                      ++|+++.+ .|+...++.+ +.+.+.++++++.+....  ++++|+.+++..+++|+++.++||.+++......  .++.
T Consensus        88 ~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~--~~~~  164 (456)
T 3mdm_A           88 KQRRVIDL-AFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQ--KPLS  164 (456)
T ss_dssp             HHHHHHGG-GGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCC--HHHH
T ss_pred             HHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccc--cHHH
Confidence            99999997 9999999999 999999999999998653  4689999999999999999999999987643322  3344


Q ss_pred             HHHHHHHHHhCCCcccchhhhcccccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHH
Q 048742          207 QVVGEIVEMLGKPNISDLFPTLAWLDL-QGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLEL  285 (472)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~  285 (472)
                      +.+..+......    ...|.+.+++. ....+...+..+.+.+++.+.++++++.....      .....|+++.++++
T Consensus       165 ~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~------~~~~~d~l~~ll~~  234 (456)
T 3mdm_A          165 QAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG------EEVPADILTQILKA  234 (456)
T ss_dssp             HHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhhHHHHHHHh
Confidence            444433322211    01122222211 11123344555667777777887776543211      13457999999986


Q ss_pred             hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHH
Q 048742          286 KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVV  365 (472)
Q Consensus       286 ~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  365 (472)
                      ..     ..++++++.+++.++++||+|||+++++|++++|++||++|++|++|++++++.+..++++++++||||+|||
T Consensus       235 ~~-----~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i  309 (456)
T 3mdm_A          235 EE-----GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVL  309 (456)
T ss_dssp             TS-----SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHH
T ss_pred             cC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHH
Confidence            42     3478899999999999999999999999999999999999999999999999888889999999999999999


Q ss_pred             HhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecC
Q 048742          366 KETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFG  445 (472)
Q Consensus       366 ~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg  445 (472)
                      +|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||++.+.     .....|+|||
T Consensus       310 ~E~lRl~p~~~~~-~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~-----~~~~~~~pFg  383 (456)
T 3mdm_A          310 KESLRLYPPAWGT-FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP-----KPRFTYFPFS  383 (456)
T ss_dssp             HHHHHHCCSSCCE-EEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC-----CCSSSCCTTC
T ss_pred             HHHHHhCCCcccc-ccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC-----CCCCcccCCC
Confidence            9999999999976 588899999999999999999999999999999999999999999997532     2345799999


Q ss_pred             CCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          446 SGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       446 ~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+|.|+|++||++|++++++.||++|
T Consensus       384 ~G~r~C~G~~lA~~e~~~~la~ll~~f  410 (456)
T 3mdm_A          384 LGHRSCIGQQFAQMEVKVVMAKLLQRL  410 (456)
T ss_dssp             CGGGSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999986


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=9.4e-67  Score=504.62  Aligned_cols=414  Identities=19%  Similarity=0.306  Sum_probs=302.4

Q ss_pred             cCCCCCCCCCCCC-CccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch
Q 048742           30 KSRTPPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS  108 (472)
Q Consensus        30 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~  108 (472)
                      +....+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|+||+.+++++++... +........
T Consensus         8 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~   86 (491)
T 3dax_A            8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFA   86 (491)
T ss_dssp             CCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHH
T ss_pred             hccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHH
Confidence            3445678999988 89999999998889999999999999999999999999999999999999976542 222211111


Q ss_pred             hhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh-----cCCccchHHHHHHHHHH
Q 048742          109 ALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK-----VGSPINLGEQMFLAILN  182 (472)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~-----~~~~~d~~~~~~~~~~~  182 (472)
                      .....+| .+.+...+++.|+++|+.+.+ .|+...++.+ +.+.+.+.+.++.....     ....+++...+..++++
T Consensus        87 ~~~~~~g-~~~~~~~~g~~w~~~r~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~  164 (491)
T 3dax_A           87 TSAKAFG-HRSIDPMDGNTTENINDTFIK-TLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE  164 (491)
T ss_dssp             HHHHHHT-CCCCCGGGTSBCCCHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHH
T ss_pred             HHHHHcC-CCcccccchhHHHHHHHHHHH-hcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHH
Confidence            1111122 222214568899999998887 7887777777 66666666665544321     12357899999999999


Q ss_pred             HHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048742          183 VVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKID  262 (472)
Q Consensus       183 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  262 (472)
                      +++.++||.++...+. .. ..+....+.+..      +...+|.+.+....+..+...+..+.+.+.+   .+++.+. 
T Consensus       165 ~~~~~~fG~~~~~~~~-~~-~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~~~-  232 (491)
T 3dax_A          165 AGYLTIFGRDLTRRDT-QK-AHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENLQK-  232 (491)
T ss_dssp             HHHHHHHCBCSTTGGG-HH-HHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHHTT-
T ss_pred             HhHHHHcCcccccccc-hh-hhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHhhc-
Confidence            9999999988754321 11 112222222111      2234554332111122223333322222221   1111110 


Q ss_pred             HhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 048742          263 AAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDE  342 (472)
Q Consensus       263 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  342 (472)
                             .  ....|+++.+++..++   ...++++++.++++++++||+|||+++++|++++|++||++|+||++|+++
T Consensus       233 -------~--~~~~d~l~~ll~~~~~---~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~  300 (491)
T 3dax_A          233 -------R--ESISELISLRMFLNDT---LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKR  300 (491)
T ss_dssp             -------C--BSCCHHHHHHHHHHHH---HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             -------c--cchhHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence                   0  2457899988876543   224788999999999999999999999999999999999999999999999


Q ss_pred             hhcCCc----------ceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc----cCeecCCCCEEEEeeeccc
Q 048742          343 VVGNGS----------IVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV----GGYTIPKGSRVFVNVWSMH  408 (472)
Q Consensus       343 ~~~~~~----------~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~----~g~~ip~G~~v~~~~~~~~  408 (472)
                      +++.++          .++++++++||||+|||+||||++|+ +. ++|.+.+|+++    +||.|||||.|+++.+++|
T Consensus       301 v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~  378 (491)
T 3dax_A          301 TLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH  378 (491)
T ss_dssp             HHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHH
T ss_pred             HhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhc
Confidence            987543          35889999999999999999999975 54 47999999998    6899999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccccccCCcc------ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          409 RDPEAWQNPLEFHPERFLKELGKLE------YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       409 ~d~~~~~~p~~f~p~R~l~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +||++|+||++||||||+++++...      ....+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       379 ~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f  448 (491)
T 3dax_A          379 LDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF  448 (491)
T ss_dssp             TCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHe
Confidence            9999999999999999997543211      011356799999999999999999999999999999987


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=8.2e-67  Score=504.41  Aligned_cols=416  Identities=19%  Similarity=0.295  Sum_probs=321.5

Q ss_pred             hhcCCCCCCCCCCCC-CccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCc
Q 048742           28 IKKSRTPPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPP  106 (472)
Q Consensus        28 ~~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~  106 (472)
                      .+++.+.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|+||+++++++++.+. +......
T Consensus         6 ~~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~-~~~~~~~   84 (491)
T 3v8d_A            6 SSRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFH   84 (491)
T ss_dssp             -CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTT-EESSHHH
T ss_pred             hhhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCc-cchHHHH
Confidence            344566789999999 69999999999999999999999999999999999999999999999999977542 2222111


Q ss_pred             chhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh-----cCCccchHHHHHHHH
Q 048742          107 ASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK-----VGSPINLGEQMFLAI  180 (472)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~-----~~~~~d~~~~~~~~~  180 (472)
                      .......+|. +.....+|+.|+++|+.+.+ +|+...++.+ +.+.+.+.++++.+...     .....++.+++..++
T Consensus        85 ~~~~~~~~g~-~~~~~~~g~~~~~~Rr~~~~-~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~  162 (491)
T 3v8d_A           85 FALSAKAFGH-RSIDPMDGNTTENINDTFIK-TLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM  162 (491)
T ss_dssp             HHHHHHHHTC-CCCCGGGSSBCCCHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred             HHHHHHhcCC-cccccccchhHHHHHHHHHH-HcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence            1111122332 33334579999999998887 8999999988 88888888888754221     134688999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          181 LNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMK  260 (472)
Q Consensus       181 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (472)
                      +++++..+||.++...+ +.. ..+.+.++.+..      +...+|.+.+.......++..++.+.+.+.+.+.+++++ 
T Consensus       163 ~~~~~~~~fG~~~~~~~-~~~-~~~~~~~~~~~~------~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~-  233 (491)
T 3v8d_A          163 FEAGYLTIFGRDLTRRD-TQK-AHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR-  233 (491)
T ss_dssp             HHHHHHHHHCBCCSCGG-GHH-HHHHHHHHHHHH------HHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC-
T ss_pred             HHHHHHHHcCccccccc-hhh-hhhHHHHHHHHH------HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            99999999999876432 111 333333333321      223444443322233344555555555555444332211 


Q ss_pred             HhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 048742          261 IDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQEL  340 (472)
Q Consensus       261 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  340 (472)
                                  ....|+++.++...++   ...++++++..+++.+++||++||+++++|++++|++||++|++|++|+
T Consensus       234 ------------~~~~d~l~~l~~~~~~---~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  298 (491)
T 3v8d_A          234 ------------ESISELISLRMFLNDT---LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV  298 (491)
T ss_dssp             ------------BSCCHHHHHHHHHHHH---HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             ------------ccccHHHHHHHHHhhc---cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence                        2457899999877654   3358999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCC----------cceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc----cCeecCCCCEEEEeeec
Q 048742          341 DEVVGNG----------SIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV----GGYTIPKGSRVFVNVWS  406 (472)
Q Consensus       341 ~~~~~~~----------~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~----~g~~ip~G~~v~~~~~~  406 (472)
                      +++++.+          ..++.+++++||||+|||+|+||++|+ +. ++|.+.+|+++    +||.||||+.|.++.++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~  376 (491)
T 3v8d_A          299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQL  376 (491)
T ss_dssp             HHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHH
T ss_pred             HHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchh
Confidence            9998643          347788889999999999999999974 44 36999999999    99999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCccccccCCccc------cCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          407 MHRDPEAWQNPLEFHPERFLKELGKLEY------QGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       407 ~~~d~~~~~~p~~f~p~R~l~~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||++|+||++|||+||++.++....      ...+..|+|||+|+|.|+|++||.+|++++++.|+++|
T Consensus       377 ~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~  448 (491)
T 3v8d_A          377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF  448 (491)
T ss_dssp             HHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHE
T ss_pred             hcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999999976543110      11356789999999999999999999999999999986


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2e-64  Score=488.87  Aligned_cols=417  Identities=16%  Similarity=0.240  Sum_probs=294.8

Q ss_pred             hhcCCCCCCCCCCCC-CccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCc
Q 048742           28 IKKSRTPPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPP  106 (472)
Q Consensus        28 ~~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~  106 (472)
                      .+++++.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|+||+++++++.++...++.+...
T Consensus        11 ~~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~   90 (498)
T 3b6h_A           11 RRRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYA   90 (498)
T ss_dssp             --CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHH
T ss_pred             HHhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhH
Confidence            344556778999988 8999999988778999999999999999999999999999999999999997765323322221


Q ss_pred             chhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh-c--CCccchHHHHHHHHHH
Q 048742          107 ASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK-V--GSPINLGEQMFLAILN  182 (472)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~-~--~~~~d~~~~~~~~~~~  182 (472)
                      .......+| .+.+ ..+++.|+   +.+.+ .|+...++.+ +.+.+.+.+.++..... .  ...+++...+..++++
T Consensus        91 ~~~~~~~~g-~~~~-~~~~~~~r---r~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~  164 (498)
T 3b6h_A           91 IFLMERIFD-VQLP-HYSPSDEK---ARMKL-TLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLR  164 (498)
T ss_dssp             HHHHHHTSC-CCCT-TCCHHHHH---HHHHT-TSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHcC-CCcc-ccCHHHHH---HHHHH-hhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHH
Confidence            111111223 2222 44566664   44444 7777677766 66666666555554322 1  2357899999999999


Q ss_pred             HHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhccc-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          183 VVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAW-LDLQGIESKTKKLVLWFDRIFDSVIVQRMKI  261 (472)
Q Consensus       183 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (472)
                      +++.++||.+++..+.... .+....+.++.....  .+...+|++.+ +......+...+..+.+.+.   +++++.+.
T Consensus       165 ~~~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  238 (498)
T 3b6h_A          165 AGYLTLYGIEALPRTHESQ-AQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---LSPARLAR  238 (498)
T ss_dssp             HHHHHHHCBSCSSCCHHHH-HHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---TCHHHHTT
T ss_pred             HHHHhhcCcccccccccch-hhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---HHHHHHhc
Confidence            9999999998754321110 112222222222111  12234554322 11111111222222222111   11111110


Q ss_pred             hHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          262 DAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                              .  ....|+++.+++..++.   ..++++++. +++.+++||++||+++++|++++|++||++|++|++|++
T Consensus       239 --------~--~~~~d~l~~ll~~~~~~---~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~  304 (498)
T 3b6h_A          239 --------R--AHRSKWLESYLLHLEEM---GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELE  304 (498)
T ss_dssp             --------C--BSCCHHHHHHHHHHHHT---TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             --------c--ccHHHHHHHHHHHHHhC---CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence                    0  34569999999776542   246777777 888889999999999999999999999999999999999


Q ss_pred             HhhcCCc-------ceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc-----cCeecCCCCEEEEeeec-cc
Q 048742          342 EVVGNGS-------IVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV-----GGYTIPKGSRVFVNVWS-MH  408 (472)
Q Consensus       342 ~~~~~~~-------~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-----~g~~ip~G~~v~~~~~~-~~  408 (472)
                      ++++.++       .++.+++++||||+|||+|+||++|+ +. ++|.+.+|+++     +||.|||||.|.++.++ +|
T Consensus       305 ~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~  382 (498)
T 3b6h_A          305 SILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQ  382 (498)
T ss_dssp             HHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCC
T ss_pred             HHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhc
Confidence            9988654       25889999999999999999999975 54 47999999988     68999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCCccccccCCcc------ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          409 RDPEAWQNPLEFHPERFLKELGKLE------YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       409 ~d~~~~~~p~~f~p~R~l~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +||++|+||++||||||++.++...      ....+..|+|||+|+|.|||++||++|++++++.||++|
T Consensus       383 ~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f  452 (498)
T 3b6h_A          383 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHL  452 (498)
T ss_dssp             TCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTE
T ss_pred             CCccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999997543211      011356799999999999999999999999999999987


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=6.1e-64  Score=474.25  Aligned_cols=367  Identities=21%  Similarity=0.304  Sum_probs=291.3

Q ss_pred             CCCCCCCCCCCCccccccc-cCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCcchh
Q 048742           32 RTPPLPPGPLGLPVLGNLL-SIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPPASA  109 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~-~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~  109 (472)
                      +..+.||||+++|++|++. .+..+++.++.++ ++||+||++++ ++.++++|+||+.+++|+.++  .|+.++.....
T Consensus        23 ~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~   99 (436)
T 2cd8_A           23 RTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTT   99 (436)
T ss_dssp             -----------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSS
T ss_pred             hhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccc
Confidence            3457899999999999986 5667889999999 99999999998 778899999999999999876  45554321111


Q ss_pred             hhh--ccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHH
Q 048742          110 LVT--SYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVM  185 (472)
Q Consensus       110 ~~~--~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~  185 (472)
                      ...  .......++..+|+.|+++|+++.+ .|+...++.+ +.+.+.++++++.+....++.+|+.+++ ..+++++|+
T Consensus       100 ~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~  178 (436)
T 2cd8_A          100 PLTEAEAALNHNMLESDPPRHTRLRKLVAR-EFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVIS  178 (436)
T ss_dssp             CCCTTGGGTCCSGGGCCTTHHHHHHHHHGG-GSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHH
T ss_pred             ccccccccccccccccCchHHHHHHHHhHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence            000  0111233456789999999999988 9999999999 9999999999999974335689999977 579999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      . +||.+.+..      .++.+....+..   . .     +          .+...+..+.+.+++.+.++++++     
T Consensus       179 ~-~~G~~~~~~------~~~~~~~~~~~~---~-~-----~----------~~~~~~~~~~~~~~~~~~i~~r~~-----  227 (436)
T 2cd8_A          179 E-LLGVPEPDR------AAFRVWTDAFVF---P-D-----D----------PAQAQTAMAEMSGYLSRLIDSKRG-----  227 (436)
T ss_dssp             H-HHTCCGGGH------HHHHHHHHHHHS---C-S-----S----------TTHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred             H-HhCCCHHHH------HHHHHHHHHHhc---c-C-----C----------HHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence            8 799875321      344444443321   0 0     0          033455667777888888877764     


Q ss_pred             hhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVG  345 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  345 (472)
                             ....|+++.|+++..+.  +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|++    
T Consensus       228 -------~~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~----  294 (436)
T 2cd8_A          228 -------QDGEDLLSALVRTSDED--GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT----  294 (436)
T ss_dssp             -------SCCCSHHHHHHHHHHHC--TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----
T ss_pred             -------CCCCCHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh----
Confidence                   23468999999876531  34689999999999999999999999999999999999999999999853    


Q ss_pred             CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCcc
Q 048742          346 NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERF  425 (472)
Q Consensus       346 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~  425 (472)
                                    ||+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++|+||++||||||
T Consensus       295 --------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  360 (436)
T 2cd8_A          295 --------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD  360 (436)
T ss_dssp             --------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC
T ss_pred             --------------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC
Confidence                          799999999999999996568999999999999999999999999999999999999999999995


Q ss_pred             ccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          426 LKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       426 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      -            ..++|||+|+|.|+|++||++|++++++.||++|
T Consensus       361 ~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  395 (436)
T 2cd8_A          361 T------------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERC  395 (436)
T ss_dssp             C------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSC
T ss_pred             C------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence            2            2589999999999999999999999999999987


No 27 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=3.7e-62  Score=459.22  Aligned_cols=364  Identities=16%  Similarity=0.216  Sum_probs=290.2

Q ss_pred             CCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecC-CccEEEEcCHHHHHHHHHhcc-ccccCCCCcchhh---
Q 048742           36 LPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLG-SKICIHISSPSLAKQILKDQD-AIFANRDPPASAL---  110 (472)
Q Consensus        36 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~v~dp~~v~~i~~~~~-~~~~~~~~~~~~~---  110 (472)
                      .||||+++|++|+...   +++..+.+++ +||+|+++.+. |...++|++++.+++++.++. ..+..++......   
T Consensus         2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~   77 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG   77 (404)
T ss_dssp             ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred             CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence            4899999999999775   7888899986 69999999875 566788999999999998763 2222222221110   


Q ss_pred             -hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc--CCccchHHHHHHHHHHHHHH
Q 048742          111 -VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV--GSPINLGEQMFLAILNVVMN  186 (472)
Q Consensus       111 -~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~--~~~~d~~~~~~~~~~~~i~~  186 (472)
                       ....+. ..++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+....  ++.+|+.+.+...+.++++.
T Consensus        78 ~~~~~~~-~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~  155 (404)
T 1jfb_A           78 KQAAKAK-PTFVDMDPPEHMHQRSMVEP-TFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY  155 (404)
T ss_dssp             HHHTTSC-CCGGGCCTTHHHHHHTTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred             cchhccc-CcccccCchhHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence             012222 33456689999999999987 9999999999 999999999999997653  46799999999999999999


Q ss_pred             HHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 048742          187 MLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKG  266 (472)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  266 (472)
                      .+||.+.+.       .++.........   .     ..|         ..+...+..+.+.+++.+.++++++      
T Consensus       156 ~~~G~~~~~-------~~~~~~~~~~~~---~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~------  205 (404)
T 1jfb_A          156 TLLGVPFND-------LEYLTQQNAIRT---N-----GSS---------TAREASAANQELLDYLAILVEQRLV------  205 (404)
T ss_dssp             HHHTCCGGG-------HHHHHHHHHHHH---C-----TTS---------CHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHcCCCHHH-------HHHHHHHHHHHh---c-----cCc---------chHHHHHHHHHHHHHHHHHHHHHHh------
Confidence            999987642       222222221110   0     001         1234455666778888888877654      


Q ss_pred             hhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC
Q 048742          267 QISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGN  346 (472)
Q Consensus       267 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  346 (472)
                            ....|+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|++|+++       
T Consensus       206 ------~~~~d~l~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-------  269 (404)
T 1jfb_A          206 ------EPKDDIISKLCTEQVK---PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-------  269 (404)
T ss_dssp             ------SCCSSHHHHHHHHTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-------
T ss_pred             ------CCCCcHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-------
Confidence                  2357999999976532   346899999999999999999999999999999999999999999982       


Q ss_pred             CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccc
Q 048742          347 GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFL  426 (472)
Q Consensus       347 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l  426 (472)
                                 .+||+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++|+||++||||||+
T Consensus       270 -----------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~  338 (404)
T 1jfb_A          270 -----------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKW  338 (404)
T ss_dssp             -----------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC
T ss_pred             -----------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCC
Confidence                       369999999999999999966689999999999999999999999999999999999999999999997


Q ss_pred             cccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          427 KELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       427 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +.          ..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       339 ~~----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f  374 (404)
T 1jfb_A          339 PP----------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF  374 (404)
T ss_dssp             CS----------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHC
Confidence            53          1489999999999999999999999999999987


No 28 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1e-63  Score=481.27  Aligned_cols=403  Identities=17%  Similarity=0.245  Sum_probs=283.1

Q ss_pred             hcCCCCCCCCCCCC-CccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcc
Q 048742           29 KKSRTPPLPPGPLG-LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPA  107 (472)
Q Consensus        29 ~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~  107 (472)
                      .++++.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++|+||+.+++++.+... ++......
T Consensus        12 ~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~   90 (475)
T 3b98_A           12 RRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ   90 (475)
T ss_dssp             -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred             hcccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence            33455678999998 99999999887889999999999999999999999999999999999999987542 22221111


Q ss_pred             hhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc----CCccchHHHHHHHHHH
Q 048742          108 SALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV----GSPINLGEQMFLAILN  182 (472)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~----~~~~d~~~~~~~~~~~  182 (472)
                      ......++ .+.+ ..+++.|   |+.+.+ .|+...++.+ +.+.+.+.++++.+....    ...+++...+..++++
T Consensus        91 ~~~~~~~g-~~~~-~~~~~~~---R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (475)
T 3b98_A           91 VLMKRIFN-MILP-SHNPESE---KKRAEM-HFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK  164 (475)
T ss_dssp             HHHHHTTC-CCCT-TCCHHHH---HHHHHH-HTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHHhC-CCCC-CCChHHH---HHHHHH-HcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence            11111223 2222 4456655   566666 8888888887 777777777776654321    1246788888888888


Q ss_pred             HHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccch-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          183 VVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQ-GIESKTKKLVLWFDRIFDSVIVQRMKI  261 (472)
Q Consensus       183 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (472)
                      +++...||.+...  .    ..+.+..+.+..      +...+|++.+.... ...+...+    ..+.+.+.+.+... 
T Consensus       165 ~~~~~~~g~~~~~--~----~~~~~~~~~~~~------~~~~~p~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-  227 (475)
T 3b98_A          165 TGYLTVFGAENNN--S----AALTQIYEEFRR------FDKLLPKLARTTVNKEEKQIASA----AREKLWKWLTPSGL-  227 (475)
T ss_dssp             HHHHHHHCCTTSC--H----HHHHHHHHHHHH------HHHHHHHHHTTCCCHHHHHHHHH----HHHHHHHHHSCTTS-
T ss_pred             HhhhheeCCcccc--c----hhcHHHHHHHHH------HHhhhHHHHHHhcChhhhHHHHH----HHHHHHHHHHHHHh-
Confidence            8888888854211  1    222222222221      11234433221011 11111222    22222221111100 


Q ss_pred             hHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          262 DAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                              +......|+++.+++...+   ...++++++. +++.+++||+|||+++++|++++|++||++|++|++|++
T Consensus       228 --------~~~~~~~d~l~~ll~~~~~---~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~  295 (475)
T 3b98_A          228 --------DRKPREQSWLGSYVKQLQD---EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ  295 (475)
T ss_dssp             --------CCCCCTTSHHHHHHHHHHH---TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC
T ss_pred             --------hccccccHHHHHHHHHHHH---cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence                    0013457999999987554   2247888888 999999999999999999999999999999999999998


Q ss_pred             HhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc-----cCeecCCCCEEEEeeec-ccCCCCCCC
Q 048742          342 EVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV-----GGYTIPKGSRVFVNVWS-MHRDPEAWQ  415 (472)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-----~g~~ip~G~~v~~~~~~-~~~d~~~~~  415 (472)
                      .  + +..++.+++++||||+|||+|+||++|+ +. ++|.+.+|+++     +||.||||+.|.++.++ +||||++|+
T Consensus       296 ~--~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~  370 (475)
T 3b98_A          296 G--G-KHLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQ  370 (475)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSS
T ss_pred             c--C-CCCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcC
Confidence            2  2 2346899999999999999999999986 55 47999999999     88999999999999999 999999999


Q ss_pred             CCCCCCCCccccccCCcc------ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          416 NPLEFHPERFLKELGKLE------YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       416 ~p~~f~p~R~l~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||++|||+||++.++...      ....+..|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       371 dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  433 (475)
T 3b98_A          371 QPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRF  433 (475)
T ss_dssp             STTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CcccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhE
Confidence            999999999997543211      011346799999999999999999999999999999986


No 29 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=2.3e-62  Score=459.75  Aligned_cols=358  Identities=17%  Similarity=0.257  Sum_probs=289.9

Q ss_pred             CCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEe----c-CC-ccEEEEcCHHHHHHHH-HhccccccCCC
Q 048742           32 RTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLK----L-GS-KICIHISSPSLAKQIL-KDQDAIFANRD  104 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~----~-~~-~~~v~v~dp~~v~~i~-~~~~~~~~~~~  104 (472)
                      ...+.||||+++|+.     +..+++.++.++ ++||+||+++    + ++ .++++|+||+.+++|+ .+..  ++.++
T Consensus         7 ~~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~   78 (406)
T 1ued_A            7 QVAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRP   78 (406)
T ss_dssp             SCCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCC
T ss_pred             CCCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--ccccc
Confidence            346688999999887     567899999999 9999999999    6 77 8999999999999999 5542  34333


Q ss_pred             Ccchh--hhh--ccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHH-
Q 048742          105 PPASA--LVT--SYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFL-  178 (472)
Q Consensus       105 ~~~~~--~~~--~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~-  178 (472)
                      .....  ...  .... +.++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+... ++.+|+.+++.. 
T Consensus        79 ~~~~~~~~~~~~~~~~-~~l~~~~g~~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~  155 (406)
T 1ued_A           79 QFTQSKSGAHVEAQFV-GQISTYDPPEHTRLRKMLTP-EFTVRRIRRMEPAIQSLIDDRLDLLEAE-GPSADLQGLFADP  155 (406)
T ss_dssp             CC---------CGGGT-TCGGGCCTTHHHHHHHHHGG-GSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTEEHHHHTHHH
T ss_pred             cccccccccccccccc-cccccCCCHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeHHHHHHHH
Confidence            21111  000  0011 23456789999999999998 8999999999 99999999999999753 678999998875 


Q ss_pred             HHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 048742          179 AILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQR  258 (472)
Q Consensus       179 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (472)
                      +++++++ .+||.+.+.     . .++.+....+..    .    ..          ..+...+..+.+.+++.+.++++
T Consensus       156 ~~~~vi~-~~~G~~~~~-----~-~~~~~~~~~~~~----~----~~----------~~~~~~~~~~~~~~~~~~~i~~r  210 (406)
T 1ued_A          156 VGAHALC-ELLGIPRDD-----Q-REFVRRIRRNAD----L----SR----------GLKARAADSAAFNRYLDNLLARQ  210 (406)
T ss_dssp             HHHHHHH-HHHTCCHHH-----H-HHHHHHHHHCC-----------C----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHH-HHcCCCHHH-----H-HHHHHHHHHHHh----c----cC----------CHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999 579986421     1 334333332211    0    00          01345556677788888888777


Q ss_pred             HHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHH
Q 048742          259 MKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQ  338 (472)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  338 (472)
                      ++            ....|+++.|+++.     +..++++++.+++.++++||+|||+++++|++++|++||++|+++++
T Consensus       211 ~~------------~~~~d~l~~ll~~~-----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~  273 (406)
T 1ued_A          211 RA------------DPDDGLLGMIVRDH-----GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFE  273 (406)
T ss_dssp             HH------------SCCSSHHHHHHHHH-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHH
T ss_pred             Hh------------CCCCCHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHh
Confidence            64            23479999999865     23589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCC
Q 048742          339 ELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPL  418 (472)
Q Consensus       339 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  418 (472)
                      |++                  ||+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       274 e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~  335 (406)
T 1ued_A          274 SPE------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD  335 (406)
T ss_dssp             CHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred             CHH------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChh
Confidence            874                  69999999999999999766899999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          419 EFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       419 ~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +||||||.            ..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       336 ~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  377 (406)
T 1ued_A          336 VLDANRAA------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRF  377 (406)
T ss_dssp             SCCTTSCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             hcCCCCCC------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhC
Confidence            99999982            2589999999999999999999999999999987


No 30 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=3.2e-61  Score=452.92  Aligned_cols=364  Identities=17%  Similarity=0.213  Sum_probs=291.2

Q ss_pred             CCCCCCCCCCCccccccccCCCChhHHHHHHHHhh-CCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCcchhh
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVY-GPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPPASAL  110 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-g~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~  110 (472)
                      +...||+|+++|.+.....+..+++..+.++ ++| |+||++++ ++.++++|+||+++++|+.++.  ++.++....+.
T Consensus         3 ~~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~   79 (412)
T 2zbx_A            3 DTATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFP   79 (412)
T ss_dssp             -----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSC
T ss_pred             CCCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccc
Confidence            4567888888887754456778999999999 777 99999997 7889999999999999998753  33332111110


Q ss_pred             hh-----cc-CCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHH-HHHH
Q 048742          111 VT-----SY-GLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFL-AILN  182 (472)
Q Consensus       111 ~~-----~~-~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~-~~~~  182 (472)
                      ..     .. ...+.++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+... ++.+|+.+.+.. ++++
T Consensus        80 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~  157 (412)
T 2zbx_A           80 ATSPRFEAVRESPQAFIGLDPPEHGTRRRMTIS-EFTVKRIKGMRPEVEEVVHGFLDEMLAA-GPTADLVSQFALPVPSM  157 (412)
T ss_dssp             CCSGGGC----CCCCGGGCCTTHHHHHHTTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHH
T ss_pred             ccccccccccccccccccCCcHHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHH
Confidence            00     00 01123456789999999999998 8999999999 99999999999999753 578999998864 8899


Q ss_pred             HHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048742          183 VVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKID  262 (472)
Q Consensus       183 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  262 (472)
                      +++. +||.+.+..      ..+......+...         .+        .  +...+..+.+.+++.+.++++++  
T Consensus       158 vi~~-~~G~~~~~~------~~~~~~~~~~~~~---------~~--------~--~~~~~~~~~~~~~~~~~i~~r~~--  209 (412)
T 2zbx_A          158 VICR-LLGVPYADH------EFFQDASKRLVQS---------TD--------A--QSALTARNDLAGYLDGLITQFQT--  209 (412)
T ss_dssp             HHHH-HHTCCGGGH------HHHHHHHHHHHHC---------SS--------H--HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHH-HcCCCHHHH------HHHHHHHHHHhcc---------Cc--------H--HHHHHHHHHHHHHHHHHHHHHHh--
Confidence            9996 799875321      3444444443220         00        1  33445666777888888877764  


Q ss_pred             HhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 048742          263 AAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDE  342 (472)
Q Consensus       263 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  342 (472)
                                ....|+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ 
T Consensus       210 ----------~~~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-  275 (412)
T 2zbx_A          210 ----------EPGAGLVGALVADQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-  275 (412)
T ss_dssp             ----------SCCSSHHHHHHHTTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-
T ss_pred             ----------CCCCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH-
Confidence                      2347999999986542   45699999999999999999999999999999999999999999999853 


Q ss_pred             hhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCC
Q 048742          343 VVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHP  422 (472)
Q Consensus       343 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p  422 (472)
                                       ||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||
T Consensus       276 -----------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P  338 (412)
T 2zbx_A          276 -----------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDI  338 (412)
T ss_dssp             -----------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCT
T ss_pred             -----------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCC
Confidence                             799999999999999996568999999999999999999999999999999999999999999


Q ss_pred             CccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          423 ERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       423 ~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||.            ..++|||.|+|.|+|++||++|++++++.||++|
T Consensus       339 eR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  376 (412)
T 2zbx_A          339 HRSA------------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRV  376 (412)
T ss_dssp             TSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCC------------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhc
Confidence            9972            2589999999999999999999999999999987


No 31 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=2e-61  Score=456.19  Aligned_cols=370  Identities=19%  Similarity=0.235  Sum_probs=294.7

Q ss_pred             CccccccccCCCChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch-hhhhccCCcceE
Q 048742           43 LPVLGNLLSIEPDFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS-ALVTSYGLHDIV  120 (472)
Q Consensus        43 ~p~~G~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  120 (472)
                      .|++||+..+..+++.++.+++++|| +||++++++.++++++||+.++.++. . ..|+....... .....+| .+.+
T Consensus         8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g-~~~l   84 (417)
T 1izo_A            8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFG-VNAI   84 (417)
T ss_dssp             CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTC-TTCG
T ss_pred             CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcc-ccce
Confidence            38999999988899999999999998 89999988889999999999986553 2 23443322111 1111223 2334


Q ss_pred             eCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 048742          121 WMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSLHGEERS  199 (472)
Q Consensus       121 ~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~  199 (472)
                      +..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++++|+.+.+..+++++|+.+ +|.+++..+  
T Consensus        85 ~~~dg~~h~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~--  158 (417)
T 1izo_A           85 QGMDGSAHIHRKMLFLS-LMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLKETE--  158 (417)
T ss_dssp             GGCCHHHHHHHHHHHHH-TSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT--
T ss_pred             eecCChHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCCchH--
Confidence            56789999999999988 9999999999 9999999999999865  678999999999999999998 599876432  


Q ss_pred             chhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHH
Q 048742          200 SVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFL  279 (472)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l  279 (472)
                       . .++.+.+..+......     ..|.         .....+..+.+.+++.+.++++++...      .  ....|++
T Consensus       159 -~-~~~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~i~~r~~~~~------~--~~~~d~l  214 (417)
T 1izo_A          159 -V-KERADDFIDMVDAFGA-----VGPR---------HWKGRRARPRAEEWIEVMIEDARAGLL------K--TTSGTAL  214 (417)
T ss_dssp             -H-HHHHHHHHHHHHHTTC-----CSHH---------HHHHHHHHHHHHHHHHHHHHHHHTTSS------C--CCTTSHH
T ss_pred             -H-HHHHHHHHHHHhhccc-----CCcc---------chhHHHHHHHHHHHHHHHHHHHHhhcc------C--CCcCCHH
Confidence             2 3444433333332111     1111         123445667788888888888765320      0  2356899


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCc
Q 048742          280 HFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLH  359 (472)
Q Consensus       280 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp  359 (472)
                      +.|+...+.  ++..++++++.+++..++ ||++||+++++|++++|++||++|++|++|                 ++|
T Consensus       215 ~~ll~~~~~--~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~  274 (417)
T 1izo_A          215 HEMAFHTQE--DGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSR  274 (417)
T ss_dssp             HHHHHCBCT--TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHH
T ss_pred             HHHHHhccc--cCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCH
Confidence            999876432  244688888877776654 999999999999999999999999999997                 368


Q ss_pred             cHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCcc
Q 048742          360 FLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNF  439 (472)
Q Consensus       360 ~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~  439 (472)
                      ||++||+|+||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++.+      ..+.
T Consensus       275 ~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~------~~~~  347 (417)
T 1izo_A          275 EREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE------ENLF  347 (417)
T ss_dssp             HHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC------CCSS
T ss_pred             HHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC------CCCc
Confidence            999999999999999998 479999999999999999999999999999999999999999999999643      1456


Q ss_pred             ceeecCCC----cccccChHHHHHHHHHHHHHHhhcC
Q 048742          440 RYLPFGSG----RRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       440 ~~~~Fg~G----~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .|+|||+|    +|.|+|++||++|++++++.|+++|
T Consensus       348 ~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~  384 (417)
T 1izo_A          348 DMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQI  384 (417)
T ss_dssp             SCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTE
T ss_pred             ceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhC
Confidence            79999999    5999999999999999999999986


No 32 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.1e-61  Score=458.65  Aligned_cols=375  Identities=18%  Similarity=0.215  Sum_probs=291.3

Q ss_pred             CCCCCCCCCCCccccccccCC-----CChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCC-
Q 048742           33 TPPLPPGPLGLPVLGNLLSIE-----PDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDP-  105 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~-  105 (472)
                      +.+.|||     ++|++.+..     .+++..+.++++ ||+|+++++ |+.++++|++++.+++++++. +.|+.++. 
T Consensus         4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~   76 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS   76 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred             ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence            4567888     888766542     457888988876 799999998 678999999999999999765 45666653 


Q ss_pred             cchh---h-h-h--ccC----CcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchH
Q 048742          106 PASA---L-V-T--SYG----LHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLG  173 (472)
Q Consensus       106 ~~~~---~-~-~--~~~----~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~  173 (472)
                      ....   . . .  ..|    ....++..+|+.|+++|+++++ .|+...++.+ +.+.+.++++++.+... ++.+|+.
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~  154 (428)
T 1cpt_A           77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLN-WFQPASIRKLEENIRRIAQASVQRLLDF-DGECDFM  154 (428)
T ss_dssp             SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHT-TSSHHHHGGGHHHHHHHHHHHHHHHHTS-SSEEEHH
T ss_pred             ccCCcccccchhccccccccccccccccCChHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeehH
Confidence            2111   1 1 1  022    1234556789999999999987 9999999999 99999999999999763 3679998


Q ss_pred             HHH-HHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHH
Q 048742          174 EQM-FLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFD  252 (472)
Q Consensus       174 ~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~  252 (472)
                      +.+ ..+++++|+.+ ||.+.+..      .++.+....+.....  .....+|++..+.. ...++..+..+.+.+++.
T Consensus       155 ~~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~-~~~~~~~~~~~~~~~~~~  224 (428)
T 1cpt_A          155 TDCALYYPLHVVMTA-LGVPEDDE------PLMLKLTQDFFGVHE--PDEQAVAAPRQSAD-EAARRFHETIATFYDYFN  224 (428)
T ss_dssp             HHTTTTHHHHHHHHH-HTCCGGGH------HHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHH-cCCCHhHH------HHHHHHHHHHHhccc--ccccccccccccch-hhHHHHHHHHHHHHHHHH
Confidence            654 56999999999 99876421      334333332211100  01112333322210 112345566677778888


Q ss_pred             HHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHH
Q 048742          253 SVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEI  332 (472)
Q Consensus       253 ~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~  332 (472)
                      +.++++++            ....|+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       225 ~~i~~r~~------------~~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~  289 (428)
T 1cpt_A          225 GFTVDRRS------------CPKDDVMSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ  289 (428)
T ss_dssp             HHHHHHTT------------SCCSSHHHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHc------------CCCCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            88877654            2346999999976532   45699999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCC
Q 048742          333 MRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPE  412 (472)
Q Consensus       333 ~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  412 (472)
                      |+|+++|++                  ||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||+
T Consensus       290 ~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~  350 (428)
T 1cpt_A          290 LALAKSDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEE  350 (428)
T ss_dssp             HHHHHHCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTT
T ss_pred             HHHHHHhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChh
Confidence            999999974                  899999999999999986 5799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          413 AWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       413 ~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+||++||||||.+            .++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       351 ~~~dP~~F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  398 (428)
T 1cpt_A          351 VFSNPDEFDITRFPN------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL  398 (428)
T ss_dssp             TCSSTTSCCTTCCSC------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGE
T ss_pred             hCCChhhcCCCCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence            999999999999852            389999999999999999999999999999986


No 33 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2.6e-60  Score=445.79  Aligned_cols=359  Identities=17%  Similarity=0.269  Sum_probs=286.1

Q ss_pred             CCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEec-CCcc-EEEEcCHHHHHHHHHhccccccCCCCcchhh-
Q 048742           34 PPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKL-GSKI-CIHISSPSLAKQILKDQDAIFANRDPPASAL-  110 (472)
Q Consensus        34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~-~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~-  110 (472)
                      .+.+|+|+.+|+.++   +..+++.++.+++ +||+||++++ ++.+ +++|+||+.+++|+.+.  .|+.++...... 
T Consensus         7 ~~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~   80 (406)
T 1s1f_A            7 SQAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVT   80 (406)
T ss_dssp             -CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBC
T ss_pred             hhhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCcc
Confidence            356778877888766   5578999999985 7999999996 5666 99999999999999863  455543321110 


Q ss_pred             --hh-ccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHH
Q 048742          111 --VT-SYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVM  185 (472)
Q Consensus       111 --~~-~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~  185 (472)
                        .. ..+....++..+|+.|+++|+++.+ .|+...++.+ +.+.+.++++++.+... ++++|+.+.+. .+++++++
T Consensus        81 ~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~  158 (406)
T 1s1f_A           81 RLAPHFIPARGAVGFLDPPDHTRLRRSVAA-AFTARGVERVRERSRGMLDELVDAMLRA-GPPADLTEAVLSPFPIAVIC  158 (406)
T ss_dssp             BSSSSCSSCTTSGGGCCTTHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHHHHHHH-CSSEEHHHHTTTHHHHHHHH
T ss_pred             cccccccccccccccCCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHhhHhHHHHHH
Confidence              01 1111233456789999999999998 8999999999 99999999999999742 67899987764 68999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      . +||.+.+..      ..+......+.....        |          .+...+..+.+.+++.+.++++++     
T Consensus       159 ~-~~G~~~~~~------~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~i~~r~~-----  208 (406)
T 1s1f_A          159 E-LMGVPATDR------HSMHTWTQLILSSSH--------G----------AEVSERAKNEMNAYFSDLIGLRSD-----  208 (406)
T ss_dssp             H-HHTCCGGGH------HHHHHHHHHHHHHHT--------T----------CCCCHHHHTHHHHHHHHHHHTSCC-----
T ss_pred             H-HhCCCHHHH------HHHHHHHHHHHhccC--------C----------HHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            8 699876421      344444444332211        1          012233445566677777765543     


Q ss_pred             hhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVG  345 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  345 (472)
                             ....|+++.|++...+    ..++++++.+++..+++|| |||+++++|++++|++||++|+|+++|++    
T Consensus       209 -------~~~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----  272 (406)
T 1s1f_A          209 -------SAGEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE----  272 (406)
T ss_dssp             -------SCCCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG----
T ss_pred             -------CCCCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH----
Confidence                   2346999999987542    4689999999999999999 99999999999999999999999999964    


Q ss_pred             CCcceecccCCCCccHHHHHHhhhcCCCCCC-CCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCc
Q 048742          346 NGSIVEESHIPKLHFLQSVVKETLRLHPPLP-LLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPER  424 (472)
Q Consensus       346 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~-~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R  424 (472)
                                    ||+|||+|+||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||||
T Consensus       273 --------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR  338 (406)
T 1s1f_A          273 --------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER  338 (406)
T ss_dssp             --------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC
T ss_pred             --------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCC
Confidence                          79999999999999999 455899999999999999999999999999999999999999999999


Q ss_pred             cccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          425 FLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       425 ~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |..            .++|||+|+|.|+|++||++|++++++.||++|
T Consensus       339 ~~~------------~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  374 (406)
T 1s1f_A          339 SPN------------PHVSFGFGPHYCPGGMLARLESELLVDAVLDRV  374 (406)
T ss_dssp             --C------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCC------------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence            962            489999999999999999999999999999987


No 34 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=9e-61  Score=451.42  Aligned_cols=372  Identities=17%  Similarity=0.212  Sum_probs=292.7

Q ss_pred             CCCCCCCccccccccCCCChhHHHHHHHHhh-CCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch-hhhhcc
Q 048742           37 PPGPLGLPVLGNLLSIEPDFHRYCAKLSRVY-GPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS-ALVTSY  114 (472)
Q Consensus        37 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-g~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~-~~~~~~  114 (472)
                      ||||   |++||+..+..+++.++.+++++| |+||++.+++.+.+++++|+.++ ++.+. +.|+....... .....+
T Consensus         4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~   78 (415)
T 3awm_A            4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL   78 (415)
T ss_dssp             --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred             CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence            6776   899999998888999999999999 69999998888999999999997 66554 34444322111 111122


Q ss_pred             CCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCC
Q 048742          115 GLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSL  193 (472)
Q Consensus       115 ~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~  193 (472)
                      | .+.++..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++++|+.+.+..+++++++.+ ||.++
T Consensus        79 g-~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~~  153 (415)
T 3awm_A           79 G-QGGVQGLDGETHRHRKQMFMG-LMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVPL  153 (415)
T ss_dssp             C-SSSGGGCCHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCCC
T ss_pred             C-CcceeecCcHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCCC
Confidence            3 233456789999999999887 9999999999 9999999999999976  568999999999999999999 79987


Q ss_pred             CCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccccc
Q 048742          194 HGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNE  273 (472)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  273 (472)
                      +..   .. .++.+.+..+......     ..|         ...+..+..+.+.+++.+.++++++...      +  .
T Consensus       154 ~~~---~~-~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~------~--~  207 (415)
T 3awm_A          154 PDD---EA-GNRAGELRALFDAAGS-----ASP---------RHLWSRLARRRVDAWAKRIIEGIRAGSI------G--S  207 (415)
T ss_dssp             CGG---GH-HHHHHHHHHHHHSTTC-----SSH---------HHHHHHHHHHHHHHHHHHHHHHHHHTSS------C--C
T ss_pred             Ccc---hH-HHHHHHHHHHHHHhcc-----cCc---------hHHHHHHHHHHHHHHHHHHHHHHHHhhh------c--C
Confidence            542   12 3333333333221110     011         1233455667788888888888765320      0  2


Q ss_pred             ccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecc
Q 048742          274 ENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEES  353 (472)
Q Consensus       274 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  353 (472)
                      ...|+++.|+...+.  ++..++++++.+++..++ ||++||+++++|++++|++||++|++|++|              
T Consensus       208 ~~~d~l~~ll~~~~~--~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------------  270 (415)
T 3awm_A          208 GSGTAAYAIAWHRDR--HDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ--------------  270 (415)
T ss_dssp             CTTSHHHHHHHCBCT--TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC--------------
T ss_pred             CCCCHHHHHHhhhhc--cCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH--------------
Confidence            456899999876432  144688888888777655 999999999999999999999999999997              


Q ss_pred             cCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCcc
Q 048742          354 HIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLE  433 (472)
Q Consensus       354 ~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~  433 (472)
                          +|||++||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++.++   
T Consensus       271 ----~~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~---  342 (415)
T 3awm_A          271 ----PDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE---  342 (415)
T ss_dssp             ----TTHHHHHHHHHHHHSCCSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC---
T ss_pred             ----HHHHHHHHHHHhhcCCCcccc-ceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC---
Confidence                489999999999999999984 799999999999999999999999999999999999999999999997431   


Q ss_pred             ccCCccceeecCCC----cccccChHHHHHHHHHHHHHHhhcC
Q 048742          434 YQGTNFRYLPFGSG----RRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       434 ~~~~~~~~~~Fg~G----~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                         .+..|+|||+|    +|.|+|++||++|++++++.|+++|
T Consensus       343 ---~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f  382 (415)
T 3awm_A          343 ---DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM  382 (415)
T ss_dssp             ---CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTC
T ss_pred             ---CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhc
Confidence               34579999999    5999999999999999999999987


No 35 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.5e-61  Score=468.41  Aligned_cols=408  Identities=15%  Similarity=0.221  Sum_probs=290.1

Q ss_pred             CCCCCCCCCCCCccccccccC-----CCChhHHHHHHHHhhCC-eEEEecCCccE-------EEEcCHHHHHHHHHhcc-
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-----EPDFHRYCAKLSRVYGP-IFKLKLGSKIC-------IHISSPSLAKQILKDQD-   97 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~-v~~~~~~~~~~-------v~v~dp~~v~~i~~~~~-   97 (472)
                      .+.+.||||+++|++|+++.+     ..+++.++.++.+|||+ ||++++++.++       +++.|++..+.++.... 
T Consensus        25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v  104 (495)
T 3dsk_A           25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV  104 (495)
T ss_dssp             CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred             CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence            456789999999999999876     47899999999999999 99999998888       66677776666554421 


Q ss_pred             ---ccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCccc
Q 048742           98 ---AIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPIN  171 (472)
Q Consensus        98 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~d  171 (472)
                         ..+........ ...+......++..+|+.|+++|+++.+ .|+... +.+ +.+++.++++++.+...  .++.+|
T Consensus       105 ~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~-~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~vd  181 (495)
T 3dsk_A          105 EKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFF-LLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKAD  181 (495)
T ss_dssp             ECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHH-HHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred             cccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence               11111111111 1111011223345689999999999998 777654 777 99999999999999753  257899


Q ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHH
Q 048742          172 LGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIF  251 (472)
Q Consensus       172 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  251 (472)
                      +.+++..+++++++.++||.+....+  .. .++...++.+.....       .|.+.. ...              +++
T Consensus       182 l~~~~~~~~~~~i~~~~~G~~~~~~~--~~-~~~~~~~~~~~~~~~-------~p~~~~-~~p--------------~~~  236 (495)
T 3dsk_A          182 FGGSSDGTAFNFLARAFYGTNPADTK--LK-ADAPGLITKWVLFNL-------HPLLSI-GLP--------------RVI  236 (495)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCCGGGST--TT-TCHHHHHHHHHHHHH-------GGGCCC-SSC--------------HHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhh--hh-hhHHHHHHHHHHHhh-------hhHhHh-ccH--------------HHH
Confidence            99999999999999999998876542  11 333343433322111       121110 000              111


Q ss_pred             HHHHHHHHHHhH--hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhh-cccccchHHHHHHHHHHHhh
Q 048742          252 DSVIVQRMKIDA--AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTV-LGGTDTTSTTLEWAMAEMLQ  328 (472)
Q Consensus       252 ~~~i~~~~~~~~--~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~Ag~~tt~~~l~~~l~~L~~  328 (472)
                      .+.+.++.+...  .+....+..+...+.++.+++..+    +.+++++|+..+++.++ +||++||+.+++|++++|+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~  312 (495)
T 3dsk_A          237 EEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEAD----KLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGR  312 (495)
T ss_dssp             HHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHH----HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            111111110000  000000000011233344554443    34689999998666655 99999999999999999996


Q ss_pred             -ChHHHHHHHHHHHHhhcCC-cceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc----cCeecCCCCEEEE
Q 048742          329 -HSEIMRKVQQELDEVVGNG-SIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV----GGYTIPKGSRVFV  402 (472)
Q Consensus       329 -~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~----~g~~ip~G~~v~~  402 (472)
                       ||++|++|++|++++++.+ +.++++++++||||+|||+|+||++|+++... |.+.+|+++    +||.||||+.|.+
T Consensus       313 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~  391 (495)
T 3dsk_A          313 AGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYG  391 (495)
T ss_dssp             HCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEE
T ss_pred             cCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEe
Confidence             9999999999999988754 67899999999999999999999999999886 668999999    4999999999999


Q ss_pred             eeecccCCCCCCCCCCCCCCCccccccCCccc----cCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          403 NVWSMHRDPEAWQNPLEFHPERFLKELGKLEY----QGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       403 ~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +.+++|+||++|+||++|||+||+++++....    -+....++|||+|+|.|+|++||.+|++++++.|+++|
T Consensus       392 ~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f  465 (495)
T 3dsk_A          392 YQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY  465 (495)
T ss_dssp             EHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             ccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHC
Confidence            99999999999999999999999975422100    01111244555555999999999999999999999986


No 36 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=5.9e-60  Score=442.97  Aligned_cols=346  Identities=17%  Similarity=0.247  Sum_probs=281.7

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCC--c-chh--hhhccCCcceEeCCC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDP--P-ASA--LVTSYGLHDIVWMPN  124 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~--~-~~~--~~~~~~~~~~~~~~~  124 (472)
                      .+..+++.++.++ ++||+||++++ +++++++|+||+.+++++.+.  .|+.++.  . ...  .....+ ...++..+
T Consensus        16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~-~~~l~~~~   91 (403)
T 3aba_A           16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPG-RGSLLWQD   91 (403)
T ss_dssp             SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCC-TTCCTTCC
T ss_pred             ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccc-ccccccCC
Confidence            4567888999999 89999999997 788999999999999999875  3554421  1 100  001012 23345678


Q ss_pred             ChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCCcccchh
Q 048742          125 GPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGEERSSVG  202 (472)
Q Consensus       125 ~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~  202 (472)
                      |+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+.. .++++|+...+. .+++++++. +||.+.+..      
T Consensus        92 g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~------  162 (403)
T 3aba_A           92 EPEHTSDRKLLAK-EFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVERR------  162 (403)
T ss_dssp             TTHHHHHHHHHHH-HSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH------
T ss_pred             chhHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH------
Confidence            9999999999998 8999999999 9999999999999974 267899987764 689999998 799876321      


Q ss_pred             HHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHH
Q 048742          203 VEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFL  282 (472)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~l  282 (472)
                      ..+....+.+..   ..     .|          .+...+..+.+.+++.+.++++++            ....|+++.|
T Consensus       163 ~~~~~~~~~~~~---~~-----~~----------p~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~~l  212 (403)
T 3aba_A          163 AEFQDIAEAMMR---VD-----QD----------AAATEAAGMRLGGLLYQLVQERRA------------NPGDDLISAL  212 (403)
T ss_dssp             HHHHHHHHHHSB---SS-----SC----------HHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHH
T ss_pred             HHHHHHHHHHHh---cc-----Cc----------HHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHH
Confidence            344443333211   00     00          134455667778888888877765            2346899999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHH
Q 048742          283 LELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQ  362 (472)
Q Consensus       283 l~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~  362 (472)
                      +++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+
T Consensus       213 l~~~~~---~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~  271 (403)
T 3aba_A          213 ITTEDP---DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVG  271 (403)
T ss_dssp             HTSCCT---TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHH
T ss_pred             HhhccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHH
Confidence            976432   45699999999999999999999999999999999999999999999863                  899


Q ss_pred             HHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCcccee
Q 048742          363 SVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYL  442 (472)
Q Consensus       363 a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~  442 (472)
                      |||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++
T Consensus       272 a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~l  339 (403)
T 3aba_A          272 NAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP------------APHL  339 (403)
T ss_dssp             HHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------------CCCS
T ss_pred             HHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC------------CCcc
Confidence            9999999999999955689999999999999999999999999999999999999999999984            2489


Q ss_pred             ecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          443 PFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       443 ~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||+|+|.|+|++||++|++++++.||++|
T Consensus       340 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  369 (403)
T 3aba_A          340 AFGFGAHQCIGQQLARIELQIVFETLFRRL  369 (403)
T ss_dssp             TTCCGGGSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999987


No 37 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=1.4e-59  Score=442.77  Aligned_cols=348  Identities=17%  Similarity=0.223  Sum_probs=286.9

Q ss_pred             ccCCCChhHHHHHHHHhhCCeEEEecC-CccEEEEcCHHHHHHHHHhccccccCCCCcchh--hhhcc----CCcceEeC
Q 048742           50 LSIEPDFHRYCAKLSRVYGPIFKLKLG-SKICIHISSPSLAKQILKDQDAIFANRDPPASA--LVTSY----GLHDIVWM  122 (472)
Q Consensus        50 ~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~  122 (472)
                      ..+..+++.++.+++++ |+||+++++ |.++++|+||+.++++++++  .|+.+......  .....    .....++.
T Consensus        25 ~~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~  101 (417)
T 3tyw_A           25 RGCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIR  101 (417)
T ss_dssp             CSSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGG
T ss_pred             cccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhh
Confidence            44568999999999998 999999987 58999999999999999886  45543211110  00100    11234556


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+... ++++|+.+.+ ..+++++++.+ ||.+.+..    
T Consensus       102 ~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~----  174 (417)
T 3tyw_A          102 TDAPEHTRYRRMLLP-AFTVRRVRAMRPAVQARVDEILDGMLAA-GGPVDLVSAYANAVSTSVICEL-LGIPRHDL----  174 (417)
T ss_dssp             CCHHHHHHHHHHHGG-GGCHHHHHHTHHHHHHHHHHHHHHHHHH-CSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT----
T ss_pred             cCCcHHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCcchHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence            789999999999997 9999999999 99999999999999763 6679999987 57889999987 89887633    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLH  280 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  280 (472)
                        ..+......+...         .+         ..+...+..+.+.+++.+.++++++            ....|+++
T Consensus       175 --~~~~~~~~~~~~~---------~~---------~~~~~~~~~~~l~~~~~~~i~~r~~------------~~~~d~l~  222 (417)
T 3tyw_A          175 --EFFRDVTRISGSR---------NS---------TAEQVSEALGGLFGLLGGLVAERRE------------EPRDDLIS  222 (417)
T ss_dssp             --THHHHHHHHHHSS---------SS---------CTTHHHHHHHHHHHHHHHHHHHHHS------------SCCSSHHH
T ss_pred             --HHHHHHHHHHhcc---------cC---------CHHHHHHHHHHHHHHHHHHHHHHhh------------CCCCCHHH
Confidence              3343333332210         00         1234556667778888888877764            34579999


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCcc
Q 048742          281 FLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHF  360 (472)
Q Consensus       281 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~  360 (472)
                      .++.....   +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|++                  |
T Consensus       223 ~ll~~~~~---~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~  281 (417)
T 3tyw_A          223 KLVTDHLV---PGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------L  281 (417)
T ss_dssp             HHHHHTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------G
T ss_pred             HHHHhccc---CCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------H
Confidence            99987654   34699999999999999999999999999999999999999999999964                  7


Q ss_pred             HHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          361 LQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       361 l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      |+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .
T Consensus       282 l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~  349 (417)
T 3tyw_A          282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTDN------------H  349 (417)
T ss_dssp             HHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCC------------C
T ss_pred             HHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCCC------------C
Confidence            9999999999999999866799999999999999999999999999999999999999999999942            4


Q ss_pred             eeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||.|+|.|+|++||++|++++++.||++|
T Consensus       350 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  381 (417)
T 3tyw_A          350 HVAFGYGVHQCVGQHLARLELEVALETLLRRV  381 (417)
T ss_dssp             CCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999987


No 38 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=2.4e-60  Score=447.07  Aligned_cols=361  Identities=19%  Similarity=0.278  Sum_probs=283.8

Q ss_pred             hhcCCCCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcc
Q 048742           28 IKKSRTPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPA  107 (472)
Q Consensus        28 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~  107 (472)
                      ++..++.+.+|||..          ..+++.++.++++ ||+|   +.++.+.++|+||+.+++++.+. ..|+.++...
T Consensus        12 r~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~   76 (411)
T 2jjn_A           12 RRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV   76 (411)
T ss_dssp             -----CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGG
T ss_pred             hcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccccc
Confidence            344477888899882          2568889999976 9998   55667889999999999999875 3566554221


Q ss_pred             hhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHH
Q 048742          108 SALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVM  185 (472)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~  185 (472)
                       ......+ ...++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.    .++++|+.+.+ ..+++++|+
T Consensus        77 -~~~~~~~-~~~~~~~~g~~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~----~~~~~d~~~~~~~~~~~~vi~  149 (411)
T 2jjn_A           77 -IEGASPT-PGMIHEIDPPEHRALRKVVSS-AFTPRTISDLEPRIRDVTRSLLAD----AGESFDLVDVLAFPLPVTIVA  149 (411)
T ss_dssp             -STTCCCC-TTCGGGCCTTHHHHHHHHHHH-HSCHHHHHTTHHHHHHHHHHHHHT----SCSEEEHHHHTTTHHHHHHHH
T ss_pred             -CCccccc-ccccccCCchHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHHHHHHH
Confidence             1111112 233456689999999999998 8999999999 9999999999988    25689998554 579999999


Q ss_pred             HHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Q 048742          186 NMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAK  265 (472)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (472)
                      .+ ||.+.+..  +.    +.+....+.....        |.+  . .....++..+..+.+.+++.+.++++++     
T Consensus       150 ~~-fG~~~~~~--~~----~~~~~~~~~~~~~--------~~~--~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~-----  206 (411)
T 2jjn_A          150 EL-LGLPPMDH--EQ----FGDWSGALVDIQM--------DDP--T-DPALAERIADVLNPLTAYLKARCAERRA-----  206 (411)
T ss_dssp             HH-HTCCSCCC--ST----TCCHHHHHHHSCC--------SCT--T-CHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             HH-cCCCHHHH--HH----HHHHHHHHHhccC--------ccc--c-chHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            98 99987542  12    2222233322111        110  0 0112344556667778888888877764     


Q ss_pred             hhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 048742          266 GQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVG  345 (472)
Q Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  345 (472)
                             ....|+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++    
T Consensus       207 -------~~~~d~l~~ll~~~~~---~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----  272 (411)
T 2jjn_A          207 -------DPGDDLISRLVLAEVD---GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----  272 (411)
T ss_dssp             -------SCCSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG----
T ss_pred             -------CCCCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----
Confidence                   2347999999976532   45699999999999999999999999999999999999999999999975    


Q ss_pred             CCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCcc
Q 048742          346 NGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERF  425 (472)
Q Consensus       346 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~  425 (472)
                                    ||+|||+|+||++|+++. ++|++.+|++++||.||||+.|.++.+++||||++|+||++||||||
T Consensus       273 --------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  337 (411)
T 2jjn_A          273 --------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRK  337 (411)
T ss_dssp             --------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCC
T ss_pred             --------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCC
Confidence                          899999999999999996 57999999999999999999999999999999999999999999997


Q ss_pred             ccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          426 LKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       426 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .+          ...++|||+|+|.|+|++||++|++++++.||++|
T Consensus       338 ~~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  374 (411)
T 2jjn_A          338 SG----------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF  374 (411)
T ss_dssp             CS----------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CC----------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            53          12589999999999999999999999999999976


No 39 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.4e-61  Score=452.46  Aligned_cols=354  Identities=21%  Similarity=0.280  Sum_probs=276.6

Q ss_pred             CCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcc
Q 048742           39 GPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHD  118 (472)
Q Consensus        39 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (472)
                      .+..+|++||++.+..+++.++.+++++||+||+ ++++.++++|+||+.+++++.++  .|+.++..........+ .+
T Consensus         3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g-~~   78 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG-RG   78 (389)
T ss_dssp             ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC-SS
T ss_pred             ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC-Cc
Confidence            3456899999998877899999999999999999 99998999999999999999886  56655411111111122 33


Q ss_pred             eEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCCCCCc
Q 048742          119 IVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSLHGEE  197 (472)
Q Consensus       119 ~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~  197 (472)
                       ++..+|+.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+.   ++.+|+.+++..+++++++.++||.+++  +
T Consensus        79 -l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~--~  151 (389)
T 1n97_A           79 -LLTDWGESWKEARKALKD-PFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLS--P  151 (389)
T ss_dssp             -TTTCCHHHHHHHHHHHCG-GGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCC--H
T ss_pred             -cccCCcHHHHHHHHHhCc-ccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcch--H
Confidence             446689999999999987 9999999999 999999999998876   5789999999999999999999999886  1


Q ss_pred             ccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccc
Q 048742          198 RSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKD  277 (472)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d  277 (472)
                            ++.+.+..+......    ..++.+.+++. ...++..+..+.+.+++.+.++                 ..  
T Consensus       152 ------~~~~~~~~~~~~~~~----~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~-----------------~r--  201 (389)
T 1n97_A          152 ------SLAEHALKALDRIMA----QTRSPLALLDL-AAEARFRKDRGALYREAEALIV-----------------HP--  201 (389)
T ss_dssp             ------HHHHHHHHHHHHHHH----HHHCGGGGGCH-HHHHHHHHHHHHHHHHHGGGTT-----------------ST--
T ss_pred             ------HHHHHHHHHHHHHHH----HHhhHHHhcCC-chhHHHHHHHHHHHHHHHHHHH-----------------HH--
Confidence                  222333333222110    01111112111 1112222222222222222111                 11  


Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCC
Q 048742          278 FLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPK  357 (472)
Q Consensus       278 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~  357 (472)
                          ++         ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.             
T Consensus       202 ----ll---------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~-------------  255 (389)
T 1n97_A          202 ----PL---------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------  255 (389)
T ss_dssp             ----TG---------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH-------------
T ss_pred             ----hc---------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------------
Confidence                22         1378999999999999999999999999999999999999999999998763             


Q ss_pred             CccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCC
Q 048742          358 LHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGT  437 (472)
Q Consensus       358 lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~  437 (472)
                           |||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++|||  +|+||++||||||++++     ...
T Consensus       256 -----a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~-----~~~  322 (389)
T 1n97_A          256 -----AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER-----GTP  322 (389)
T ss_dssp             -----HHHHHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC-----CCC
T ss_pred             -----HHHHHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC-----CCC
Confidence                 8999999999999986 7999999999999999999999999999999  99999999999999641     123


Q ss_pred             ccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          438 NFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       438 ~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       323 ~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  357 (389)
T 1n97_A          323 SGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF  357 (389)
T ss_dssp             BTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999999999987


No 40 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=4.8e-60  Score=444.36  Aligned_cols=360  Identities=18%  Similarity=0.228  Sum_probs=284.6

Q ss_pred             CCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCcchh---
Q 048742           34 PPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPPASA---  109 (472)
Q Consensus        34 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~---  109 (472)
                      ....+||.. |+-   ..+..+++.++.+++ +||+|+++++ ++.++++|+||+.+++++.+.  .|+.++.....   
T Consensus         6 ~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~   78 (413)
T 2z36_A            6 ADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLF   78 (413)
T ss_dssp             ----CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCS
T ss_pred             HHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccc
Confidence            345566652 332   345678999999997 7899999997 788999999999999999874  45554321110   


Q ss_pred             --hhhcc----CCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHH
Q 048742          110 --LVTSY----GLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAIL  181 (472)
Q Consensus       110 --~~~~~----~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~  181 (472)
                        .....    +..+.++..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+....++++|+.+.+. .+++
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~  157 (413)
T 2z36_A           79 TLDAATLQQLRSQPPLMLGMDGAEHSAARRPVIG-EFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPS  157 (413)
T ss_dssp             SCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHG-GGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHH
T ss_pred             ccccccccccccccccccccCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHH
Confidence              00111    12341446689999999999998 8999999999 99999999999998742256899987665 6899


Q ss_pred             HHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          182 NVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKI  261 (472)
Q Consensus       182 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (472)
                      ++++.+ ||.+.+..      ..+......+    ...    ..|           +...+..+.+.+++.+.++++++ 
T Consensus       158 ~vi~~~-~G~~~~~~------~~~~~~~~~~----~~~----~~~-----------~~~~~~~~~~~~~~~~~i~~r~~-  210 (413)
T 2z36_A          158 LVICEL-LGVPYTDH------DFFQSRTTMM----VSR----TSM-----------EDRRRAFAELRAYIDDLITRKES-  210 (413)
T ss_dssp             HHHHHH-HTCCGGGH------HHHHHHHHHT----TCS----SCH-----------HHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHH-hCCCHHHH------HHHHHHHHHH----hcc----cCc-----------HHHHHHHHHHHHHHHHHHHHHHh-
Confidence            999994 89875321      3333332221    110    001           34455666777888888877654 


Q ss_pred             hHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          262 DAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                                 ....|+++.|+++...   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus       211 -----------~~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~  276 (413)
T 2z36_A          211 -----------EPGDDLFSRQIARQRQ---EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG  276 (413)
T ss_dssp             -----------SCCSSHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred             -----------CCCCCHHHHHHHhhcC---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH
Confidence                       2346999999987543   34689999999999999999999999999999999999999999999963


Q ss_pred             HhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCC
Q 048742          342 EVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFH  421 (472)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  421 (472)
                                        ||+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++|+||++||
T Consensus       277 ------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  338 (413)
T 2z36_A          277 ------------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLD  338 (413)
T ss_dssp             ------------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCC
T ss_pred             ------------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccC
Confidence                              79999999999999999656899999999999999999999999999999999999999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||||..            .++|||+|+|.|+|++||++|++++++.||++|
T Consensus       339 PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  377 (413)
T 2z36_A          339 VERGAR------------HHLAFGFGPHQCLGQNLARMELQIVFDTLFRRI  377 (413)
T ss_dssp             TTCCCC------------CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCC------------CCCCCCCCCccCccHHHHHHHHHHHHHHHHHhC
Confidence            999842            479999999999999999999999999999987


No 41 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=1.1e-59  Score=442.05  Aligned_cols=346  Identities=18%  Similarity=0.248  Sum_probs=280.5

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCc-chh--hhhccCCcceEeCCCCh
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPP-ASA--LVTSYGLHDIVWMPNGP  126 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~  126 (472)
                      .+..+++.++.++ ++||+|+++++ ++.+.++|+||+.+++|+.++  .|+.++.. ...  .....+..+ ++..+|+
T Consensus        34 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~  109 (417)
T 2y5n_A           34 VHGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPP  109 (417)
T ss_dssp             SSSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTT
T ss_pred             hhccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCch
Confidence            4567899999999 89999999997 788999999999999999875  24443321 100  001012233 4567899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCC-ccchHHHHH-HHHHHHHHHHHhcCCCCCCcccchhH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGS-PINLGEQMF-LAILNVVMNMLWGSSLHGEERSSVGV  203 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~-~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  203 (472)
                      .|+++|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++ ++|+.+.+. .+++++|+. +||.+.+..      .
T Consensus       110 ~h~~~R~~l~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~------~  179 (417)
T 2y5n_A          110 EHSRLRRLVVK-AFTARRAESLRPRAREIAHELVDQMAA--TGQPADLVAMFARQLPVRVICE-LLGVPSADH------D  179 (417)
T ss_dssp             HHHHHHHHHHH-HSCHHHHHHTHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH------H
T ss_pred             HHHHHHHHHhh-hcCHHHHHHHHHHHHHHHHHHHHHHHh--CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH------H
Confidence            99999999998 8999999999 9999999999999975  44 899997764 689999998 689876321      3


Q ss_pred             HHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHH
Q 048742          204 EFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLL  283 (472)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll  283 (472)
                      .+.+....+    ...  .. .|          .++..+..+.+.+++.+.++++++            ....|+++.|+
T Consensus       180 ~~~~~~~~~----~~~--~~-~~----------~~~~~~~~~~l~~~~~~~i~~r~~------------~~~~dll~~ll  230 (417)
T 2y5n_A          180 RFTRWSGAF----LST--AE-VT----------AEEMQEAAEQAYAYMGDLIDRRRK------------EPTDDLVSALV  230 (417)
T ss_dssp             HHHHHHHTT----STT--CC-CC----------HHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHH
T ss_pred             HHHHHHHHH----hcc--cC-CC----------HHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHH
Confidence            333332221    110  00 01          134555667778888888877765            23469999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHH
Q 048742          284 ELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQS  363 (472)
Q Consensus       284 ~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a  363 (472)
                      ++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|
T Consensus       231 ~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a  289 (417)
T 2y5n_A          231 QARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------LIPS  289 (417)
T ss_dssp             HCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHH
T ss_pred             hhhcc---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHH
Confidence            76532   45699999999999999999999999999999999999999999999863                  8999


Q ss_pred             HHHhhhcCCCCCC-CCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCcccee
Q 048742          364 VVKETLRLHPPLP-LLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYL  442 (472)
Q Consensus       364 ~i~E~lRl~~~~~-~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~  442 (472)
                      ||+|+||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++
T Consensus       290 ~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l  357 (417)
T 2y5n_A          290 AVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP------------NQHL  357 (417)
T ss_dssp             HHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS------------CCCC
T ss_pred             HHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC------------CCcC
Confidence            9999999999999 45689999999999999999999999999999999999999999999983            2489


Q ss_pred             ecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          443 PFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       443 ~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||.|+|.|+|++||++|++++++.||++|
T Consensus       358 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  387 (417)
T 2y5n_A          358 GFGHGVHHCLGAPLARVELQVALEVLLQRL  387 (417)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCcCCcCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999987


No 42 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=6.4e-60  Score=443.46  Aligned_cols=361  Identities=14%  Similarity=0.130  Sum_probs=288.7

Q ss_pred             CCCCCCCCCCCCccc--ccccc-----CCCChhHHHHHHHHhhC--CeEEEecCCccEEEEcCHHHHHHHHHhccccccC
Q 048742           32 RTPPLPPGPLGLPVL--GNLLS-----IEPDFHRYCAKLSRVYG--PIFKLKLGSKICIHISSPSLAKQILKDQDAIFAN  102 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~--G~~~~-----~~~~~~~~~~~~~~~yg--~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~  102 (472)
                      ++.+.||||...|..  +..-.     +..+++.++.+++ +||  +||+++..+ +.++|+||+.+++++++. ..|+.
T Consensus         8 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f~~   84 (415)
T 2zwu_A            8 SNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHFSS   84 (415)
T ss_dssp             ---CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTEET
T ss_pred             CccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-cccCC
Confidence            567889999998864  43221     3457889999995 799  999998333 689999999999999764 45666


Q ss_pred             CCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHH
Q 048742          103 RDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAI  180 (472)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~  180 (472)
                      ++..........+ .+.++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+..  ++.+|+.+.+ ..++
T Consensus        85 ~~~~~~~~~~~~~-~~~l~~~~g~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~  160 (415)
T 2zwu_A           85 ECPFIPREAGEAY-DFIPTSMDPPEQRQFRALANQ-VVGMPVVDKLENRIQELACSLIESLRP--QGQCNFTEDYAEPFP  160 (415)
T ss_dssp             TSCSSSHHHHHHC-CCTTTTCCTTTTHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHHHHGG--GTEEEHHHHTTTHHH
T ss_pred             CcccCCCCccccc-cccCccCCCcHHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHHH
Confidence            5411111111112 220446689999999999998 8999999999 9999999999999976  3479999865 7899


Q ss_pred             HHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          181 LNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMK  260 (472)
Q Consensus       181 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (472)
                      +++++.+ ||.+++..      .++.+....+..   ..     .|.           +..+..+.+.+++.+.++++++
T Consensus       161 ~~vi~~~-~G~~~~~~------~~~~~~~~~~~~---~~-----~P~-----------~~~~~~~~~~~~~~~~i~~r~~  214 (415)
T 2zwu_A          161 IRIFMLL-AGLPEEDI------PHLKYLTDQMTR---PD-----GSM-----------TFAEAKEALYDYLIPIIEQRRQ  214 (415)
T ss_dssp             HHHHHHH-HTCCGGGH------HHHHHHHHHHHS---CC-----SSS-----------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCHHHH------HHHHHHHHHHHh---cc-----CHH-----------HHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999 99986421      345444444322   10     121           2344556677888888877765


Q ss_pred             HhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 048742          261 IDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQEL  340 (472)
Q Consensus       261 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  340 (472)
                                  ....|+++.|++...+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus       215 ------------~~~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~  279 (415)
T 2zwu_A          215 ------------KPGTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERP  279 (415)
T ss_dssp             ------------SCCSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCG
T ss_pred             ------------CCCCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCH
Confidence                        2347999999976432   4468999999999999999999999999999999999999999999996


Q ss_pred             HHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCC
Q 048742          341 DEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEF  420 (472)
Q Consensus       341 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f  420 (472)
                      +                  ||+|||+|+||++|+++. + |.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       280 ~------------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F  339 (415)
T 2zwu_A          280 E------------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHV  339 (415)
T ss_dssp             G------------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSC
T ss_pred             H------------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCcccc
Confidence            4                  899999999999999995 6 9999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          421 HPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       421 ~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |||||-            ..++|||+|+|.|+|++||++|++++++.||++|
T Consensus       340 ~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  379 (415)
T 2zwu_A          340 DFSRQK------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI  379 (415)
T ss_dssp             CTTCSS------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence            999952            2489999999999999999999999999999987


No 43 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=5.2e-60  Score=443.17  Aligned_cols=343  Identities=17%  Similarity=0.178  Sum_probs=282.6

Q ss_pred             cCCCChhHHHHHHHHhh--CCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhH
Q 048742           51 SIEPDFHRYCAKLSRVY--GPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEW  128 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~y--g~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (472)
                      .+..+++.++.+++++|  |+||+++.++ +.++|+||+.+++++++ .+.|+.++......... +....++..+|+.|
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~   92 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETG-EFELMMAGQDDPVH   92 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCc-ccccCcccCCchHH
Confidence            46688999999999999  9999999886 58999999999999955 34566554332211111 22234457789999


Q ss_pred             HHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHHHH
Q 048742          129 RQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVEFR  206 (472)
Q Consensus       129 ~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  206 (472)
                      +++|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+ ..+++++++. +||.+.+..      .++.
T Consensus        93 ~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~------~~~~  162 (398)
T 4fb2_A           93 KKYRQLVAK-PFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPEDG------DTYR  162 (398)
T ss_dssp             HHHHHHHHT-TTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGGGH------HHHH
T ss_pred             HHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHHH------HHHH
Confidence            999999987 9999999999 9999999999998865  4568875554 6799999999 689765321      4455


Q ss_pred             HHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHh
Q 048742          207 QVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELK  286 (472)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~  286 (472)
                      +....+..           +.        ..+...+..+.+.+++.+.++++++            ....|+++.|+++.
T Consensus       163 ~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d~l~~ll~~~  211 (398)
T 4fb2_A          163 RWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRT------------NPGNDIMSRVIMSK  211 (398)
T ss_dssp             HHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHHCC
T ss_pred             HHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHcc
Confidence            55444432           10        0124556667788888888887765            34579999999865


Q ss_pred             hcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHH
Q 048742          287 QQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVK  366 (472)
Q Consensus       287 ~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~  366 (472)
                      .+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |++|||+
T Consensus       212 ~~---~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~  270 (398)
T 4fb2_A          212 ID---GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVD  270 (398)
T ss_dssp             BT---TBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHH
T ss_pred             cC---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHH
Confidence            43   45699999999999999999999999999999999999999999999975                  7899999


Q ss_pred             hhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCC
Q 048742          367 ETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGS  446 (472)
Q Consensus       367 E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~  446 (472)
                      |+||++|+++  ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||.            ..++|||+
T Consensus       271 E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~~~FG~  336 (398)
T 4fb2_A          271 ELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP------------NRHLSLGH  336 (398)
T ss_dssp             HHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS------------CCCCTTCC
T ss_pred             HHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC------------CCCCCCCC
Confidence            9999999999  479999999999999999999999999999999999999999999973            25899999


Q ss_pred             CcccccChHHHHHHHHHHHHHHhhcC
Q 048742          447 GRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       447 G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|.|+|++||.+|++++++.||++|
T Consensus       337 G~r~C~G~~lA~~e~~~~l~~ll~~f  362 (398)
T 4fb2_A          337 GIHRCLGAHLIRVEARVAITEFLKRI  362 (398)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999987


No 44 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.5e-59  Score=440.70  Aligned_cols=345  Identities=17%  Similarity=0.256  Sum_probs=281.4

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchh-----hhhccCCcceEeCCCC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASA-----LVTSYGLHDIVWMPNG  125 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  125 (472)
                      .+..+++.++.++ ++||+||++++++.++++|+||+.+++++.++.  |+.++.....     ...... ...++..+|
T Consensus        17 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g   92 (411)
T 3a4g_A           17 TFWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATP-TPMMILMDP   92 (411)
T ss_dssp             GGTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCS-SCCGGGCCT
T ss_pred             hhhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccc-ccccccCCc
Confidence            3567899999999 899999999999999999999999999998763  6655422100     011112 233456789


Q ss_pred             hhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhH
Q 048742          126 PEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGV  203 (472)
Q Consensus       126 ~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  203 (472)
                      +.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++++|+...+ ..+++++|+.+ ||.+.+..      .
T Consensus        93 ~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~------~  162 (411)
T 3a4g_A           93 PDHTRLRKLVGR-SFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAEDR------D  162 (411)
T ss_dssp             THHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH------H
T ss_pred             hHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHHHH------H
Confidence            999999999998 8999999999 9999999999999865  4689997554 67999999975 89876421      3


Q ss_pred             HHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHH
Q 048742          204 EFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLL  283 (472)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll  283 (472)
                      .+.+....+..    .     .|          .++..+..+.+.+++.+.++++++            ....|+++.|+
T Consensus       163 ~~~~~~~~~~~----~-----~p----------~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d~l~~ll  211 (411)
T 3a4g_A          163 DFSAWSSVLVD----D-----SP----------ADDKNAAMGKLHGYLSDLLERKRT------------EPDDALLSSLL  211 (411)
T ss_dssp             HHHHHHHHHTT----S-----SC----------TTTHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHH
T ss_pred             HHHHHHHHHhc----c-----CC----------HHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHH
Confidence            44443333211    0     11          023445556777888888877765            23469999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHH
Q 048742          284 ELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQS  363 (472)
Q Consensus       284 ~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a  363 (472)
                      ++...  ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|
T Consensus       212 ~~~~~--~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a  271 (411)
T 3a4g_A          212 AVSDE--DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------------------LISS  271 (411)
T ss_dssp             HCCCT--TCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHH
T ss_pred             Hhhcc--CCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHH
Confidence            76431  245699999999999999999999999999999999999999999999863                  8999


Q ss_pred             HHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceee
Q 048742          364 VVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLP  443 (472)
Q Consensus       364 ~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~  443 (472)
                      ||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||.            ..++|
T Consensus       272 ~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~  339 (411)
T 3a4g_A          272 AVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------------SGGVF  339 (411)
T ss_dssp             HHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------------TTCCT
T ss_pred             HHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------------CCCCC
Confidence            999999999999965689999999999999999999999999999999999999999999984            14899


Q ss_pred             cCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          444 FGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       444 Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ||+|+|.|+|++||++|++++++.||++|
T Consensus       340 FG~G~r~C~G~~lA~~e~~~~la~ll~~f  368 (411)
T 3a4g_A          340 FGHGIHFCLGAQLARLEGRVAIGRLFADR  368 (411)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999987


No 45 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=1.8e-59  Score=440.94  Aligned_cols=350  Identities=20%  Similarity=0.306  Sum_probs=281.1

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch----hhhhccCCcceEeCCCCh
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS----ALVTSYGLHDIVWMPNGP  126 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  126 (472)
                      .+..+++.++.++ ++||+|+++++++.++++|+||+.+++++++. ..++.++....    ....... ...++..+|+
T Consensus        10 ~~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~   86 (404)
T 3ejb_B           10 EFLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQ-NQMMLFQNQP   86 (404)
T ss_dssp             HHHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHH-HTSGGGCCTT
T ss_pred             ccccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhh-hcchhhcCCc
Confidence            3456889999988 58999999999999999999999999999987 45665543111    0001111 1234567899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVE  204 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  204 (472)
                      .|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+ ..+++++++.+ ||.+.+..      ..
T Consensus        87 ~h~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------~~  156 (404)
T 3ejb_B           87 DHRRLRTLASG-AFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEEDR------EQ  156 (404)
T ss_dssp             HHHHHHHHHHG-GGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH------HH
T ss_pred             hHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHHHH------HH
Confidence            99999999987 9999999999 9999999999998875  5678986655 45888999884 89765321      34


Q ss_pred             HHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHH
Q 048742          205 FRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLE  284 (472)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  284 (472)
                      +.+....+......       |..     ....+...+..+.+.+++.+.++++++            ....|+++.|+ 
T Consensus       157 ~~~~~~~~~~~~~~-------p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d~l~~ll-  211 (404)
T 3ejb_B          157 LKEWAASLIQTIDF-------TRS-----RKALTEGNIMAVQAMAYFKELIQKRKR------------HPQQDMISMLL-  211 (404)
T ss_dssp             HHHHHHHHHGGGST-------TCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHH-
T ss_pred             HHHHHHHHHHhccC-------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHh------------CCcchHHHHHH-
Confidence            44444443322211       211     112345556667778888888877764            34579999999 


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHH
Q 048742          285 LKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSV  364 (472)
Q Consensus       285 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  364 (472)
                      ....   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |+++|
T Consensus       212 ~~~~---~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~  270 (404)
T 3ejb_B          212 KGRE---KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTA  270 (404)
T ss_dssp             HC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHH
T ss_pred             hccc---CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHH
Confidence            4332   45699999999999999999999999999999999999999999999975                  79999


Q ss_pred             HHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          365 VKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       365 i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      |+|+||++|+++. ++|++.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .++||
T Consensus       271 i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~~------------~~~~F  337 (404)
T 3ejb_B          271 VEECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPN------------PHLSF  337 (404)
T ss_dssp             HHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSSC------------CCCTT
T ss_pred             HHHHHHhCCcccc-cceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCCC------------CCCCC
Confidence            9999999999994 5899999999999999999999999999999999999999999999832            47999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||++|++++++.|+++|
T Consensus       338 g~G~r~C~G~~lA~~e~~~~l~~ll~~f  365 (404)
T 3ejb_B          338 GHGHHVCLGSSLARLEAQIAINTLLQRM  365 (404)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987


No 46 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.2e-59  Score=441.85  Aligned_cols=350  Identities=22%  Similarity=0.331  Sum_probs=280.7

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC--cchh-hhh------c-cCCcceE
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP--PASA-LVT------S-YGLHDIV  120 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~--~~~~-~~~------~-~~~~~~~  120 (472)
                      .+..+++..+.++ ++||+||++++++.++++|+||+.+++|+.++.  ++.++.  .... ...      . .+. +.+
T Consensus        12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l   87 (408)
T 1odo_A           12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAV-ENM   87 (408)
T ss_dssp             TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHC-CSG
T ss_pred             cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccc-ccc
Confidence            5667899999999 999999999998889999999999999998653  222211  0100 000      0 011 234


Q ss_pred             eCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-CCccchHHHHH-HHHHHHHHHHHhcCCCCCCc
Q 048742          121 WMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-GSPINLGEQMF-LAILNVVMNMLWGSSLHGEE  197 (472)
Q Consensus       121 ~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~  197 (472)
                      +..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+.... ++.+|+.+.+. .+++++|+. +||.+.+.  
T Consensus        88 ~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  163 (408)
T 1odo_A           88 FTAYGPNHRKLRRLVAP-AFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR--  163 (408)
T ss_dssp             GGCCHHHHHHHHHTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH--
T ss_pred             cccCChHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH--
Confidence            56789999999999997 9999999999 999999999999997543 57899998887 599999996 79986531  


Q ss_pred             ccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccc
Q 048742          198 RSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKD  277 (472)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d  277 (472)
                         . .++....+.+...    .    .+          .+...+..+.+.+++.+.++++++            ....|
T Consensus       164 ---~-~~~~~~~~~~~~~----~----~~----------~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d  209 (408)
T 1odo_A          164 ---R-DGFRALVDGVFDT----T----LD----------QAEAQANTARLYEVLDQLIAAKRA------------TPGDD  209 (408)
T ss_dssp             ---H-HHHHHHHHHHHCT----T----CC----------HHHHHHHHHHHHHHHHHHHHHHHH------------SCCSS
T ss_pred             ---H-HHHHHHHHHHhcc----c----CC----------HHHHHHHHHHHHHHHHHHHHHHhh------------CCCCC
Confidence               1 3444443333210    0    00          134455666778888888877664            23479


Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCC
Q 048742          278 FLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPK  357 (472)
Q Consensus       278 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~  357 (472)
                      +++.|+++..+..++..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+                 
T Consensus       210 ~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------  272 (408)
T 1odo_A          210 MTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-----------------  272 (408)
T ss_dssp             HHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-----------------
T ss_pred             HHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------
Confidence            999999876431113468999999999999999999999999999999999999999999974                 


Q ss_pred             CccHHHHHHhhhcCCCCCCCCCCcccccccccc-CeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccC
Q 048742          358 LHFLQSVVKETLRLHPPLPLLVPHCPVESCTVG-GYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQG  436 (472)
Q Consensus       358 lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~  436 (472)
                       +||+|||+|+||++|+++..++|++.+|++++ ||.||||+.|.++.+++||||++|+||++|||||+           
T Consensus       273 -~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-----------  340 (408)
T 1odo_A          273 -VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT-----------  340 (408)
T ss_dssp             -SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS-----------
T ss_pred             -HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC-----------
Confidence             37999999999999999976689999999999 99999999999999999999999999999999994           


Q ss_pred             CccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          437 TNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       437 ~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                       +..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       341 -~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f  375 (408)
T 1odo_A          341 -VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF  375 (408)
T ss_dssp             -CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             -CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence             12589999999999999999999999999999987


No 47 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=7.1e-60  Score=443.46  Aligned_cols=346  Identities=17%  Similarity=0.227  Sum_probs=277.5

Q ss_pred             ccCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCcchh-----hhhc-cCCcceEeC
Q 048742           50 LSIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPPASA-----LVTS-YGLHDIVWM  122 (472)
Q Consensus        50 ~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~  122 (472)
                      ..+..+++..+.++ ++||+||++++ ++.++++|+||+.+++++.++.  ++.++....+     .... ....+.++.
T Consensus        20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   96 (408)
T 3abb_A           20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG   96 (408)
T ss_dssp             CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred             cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence            45668899999999 89999999998 7889999999999999998753  3332210000     0000 001123456


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+... ++.+|+.+.+. .+++++++. +||.+.+..    
T Consensus        97 ~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~----  169 (408)
T 3abb_A           97 VDDPVHARQRRMLIP-SFGVKRMNAIRPRLQSLVDRLLDDMLAK-GPGADLVSAFALPVPSVAICE-LLGVPYGDH----  169 (408)
T ss_dssp             CCTTHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHT-CSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH----
T ss_pred             CCchHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHHH----
Confidence            789999999999998 8999999999 99999999999999752 56899998876 488999997 799875321    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLH  280 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  280 (472)
                        ..+......+...      .  .+           +...+..+.+.+++.+.++++++            ....|+++
T Consensus       170 --~~~~~~~~~~~~~------~--~~-----------~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d~l~  216 (408)
T 3abb_A          170 --DFFEECSRNFVGA------A--TS-----------AEADAAFGELYTYLHGLVGRKQA------------EPEDGLLD  216 (408)
T ss_dssp             --HHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHH------------SCCSSHHH
T ss_pred             --HHHHHHHHHHhcc------c--ch-----------HHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHH
Confidence              3444443332210      0  00           11223445567777888877654            23469999


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCcc
Q 048742          281 FLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHF  360 (472)
Q Consensus       281 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~  360 (472)
                      .|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |
T Consensus       217 ~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~  275 (408)
T 3abb_A          217 ELIARQLE---EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------A  275 (408)
T ss_dssp             HHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------H
T ss_pred             HHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------h
Confidence            99987653   45699999999999999999999999999999999999999999998764                  7


Q ss_pred             HHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          361 LQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       361 l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      |+|||+|+||++|+++ .++|++.+|++++||.||||+.|.++.+++||||++|+||++|||+||-            ..
T Consensus       276 l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~  342 (408)
T 3abb_A          276 VSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA------------RH  342 (408)
T ss_dssp             HHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC------------TT
T ss_pred             HHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC------------CC
Confidence            9999999999999999 5689999999999999999999999999999999999999999999962            25


Q ss_pred             eeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||+|+|.|+|++||++|++++++.||++|
T Consensus       343 ~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  374 (408)
T 3abb_A          343 HVGFGHGIHQCLGQNLARAELEIALGGLFARI  374 (408)
T ss_dssp             CCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999987


No 48 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.2e-59  Score=440.84  Aligned_cols=344  Identities=17%  Similarity=0.229  Sum_probs=279.9

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHH
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQ  130 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (472)
                      .+..+++.++.+++++ |+|+++..++ +.++|+||+.+++++++. +.|+.++..........+ ...++..+|+.|++
T Consensus        21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~h~~   96 (396)
T 3oft_A           21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVM-QFIPLQQDGAEHKA   96 (396)
T ss_dssp             TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHH-CCTTTTCCHHHHHH
T ss_pred             hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccccc-ccCccccCCcHHHH
Confidence            4567899999999999 9999998875 589999999999999765 456655422211111111 23445778999999


Q ss_pred             HHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCCcccchhHHHHHH
Q 048742          131 LRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGEERSSVGVEFRQV  208 (472)
Q Consensus       131 ~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  208 (472)
                      +|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+. .++.++++. +||.+....      ..+...
T Consensus        97 ~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~------~~~~~~  166 (396)
T 3oft_A           97 FRTPVMK-GLASRFVVALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLEDR------PRLRQL  166 (396)
T ss_dssp             HHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGGGH------HHHHHH
T ss_pred             HHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHHH------HHHHHH
Confidence            9999998 9999999999 9999999999999976  45788876664 456666665 688754321      344444


Q ss_pred             HHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhc
Q 048742          209 VGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQ  288 (472)
Q Consensus       209 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  288 (472)
                      ...+.....                   .+...+..+.+.+++.+.++++++            ....|+++.|+++..+
T Consensus       167 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d~l~~ll~~~~~  215 (396)
T 3oft_A          167 GVQLTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMA------------QPGDDLFSRILSEPVG  215 (396)
T ss_dssp             HHHHHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHTSCBT
T ss_pred             HHHHhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHhhcc
Confidence            443321000                   123455667778888888887765            3457999999986543


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhh
Q 048742          289 GEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKET  368 (472)
Q Consensus       289 ~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~  368 (472)
                         +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|+
T Consensus       216 ---~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~  274 (396)
T 3oft_A          216 ---GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADEL  274 (396)
T ss_dssp             ---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHH
Confidence               55699999999999999999999999999999999999999999999975                  899999999


Q ss_pred             hcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCc
Q 048742          369 LRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGR  448 (472)
Q Consensus       369 lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~  448 (472)
                      ||++|++ . ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||++          +..++|||+|+
T Consensus       275 lRl~p~~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----------~~~~~~FG~G~  342 (396)
T 3oft_A          275 MRRYPTV-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----------PIRHTTMGVGA  342 (396)
T ss_dssp             HHHCCCB-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----------GGGSSTTCCGG
T ss_pred             HHhcCcc-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----------CCCcccCCCCC
Confidence            9999999 4 4799999999999999999999999999999999999999999999974          24699999999


Q ss_pred             ccccChHHHHHHHHHHHHHHhhcC
Q 048742          449 RICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       449 r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |.|+|++||++|++++++.|+++|
T Consensus       343 r~C~G~~lA~~e~~~~l~~ll~~~  366 (396)
T 3oft_A          343 HRCVGAGLARMEVIVFLREWLGGM  366 (396)
T ss_dssp             GCCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999986


No 49 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3.8e-59  Score=437.88  Aligned_cols=345  Identities=20%  Similarity=0.283  Sum_probs=281.8

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCc--c----h-----hh-hh--ccCC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPP--A----S-----AL-VT--SYGL  116 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~--~----~-----~~-~~--~~~~  116 (472)
                      .+..+++.++.++ ++||+||++++++.++++|+||+.+++++.++  .|+.++..  .    .     .. ..  ....
T Consensus        11 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (404)
T 1z8o_A           11 SFHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA   87 (404)
T ss_dssp             GGTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS
T ss_pred             ccccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc
Confidence            3567899999999 99999999999998999999999999999876  45555432  1    0     00 01  0012


Q ss_pred             cceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCC
Q 048742          117 HDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLH  194 (472)
Q Consensus       117 ~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~  194 (472)
                      .+ ++..+|+.|+++|+.+.+ .|+...++.+ +.+.+.++++++.+..  ++++|+.+.+ ..+++++|+. +||.+.+
T Consensus        88 ~~-l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  162 (404)
T 1z8o_A           88 TN-MGTSDPPTHTRLRKLVSQ-EFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICE-LLGVDEK  162 (404)
T ss_dssp             SS-GGGCCTTHHHHHHHHHHT-TSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred             cc-cccCCCcHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHH-HhCCCHH
Confidence            23 446689999999999998 8999999999 9999999999998864  6689998765 5799999998 5998764


Q ss_pred             CCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccc
Q 048742          195 GEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEE  274 (472)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  274 (472)
                      ..      ..+....+.+..  .      ..|.         .++..+..+.+.+++.+.++++++            ..
T Consensus       163 ~~------~~~~~~~~~~~~--~------~~p~---------~~~~~~~~~~~~~~~~~~i~~r~~------------~~  207 (404)
T 1z8o_A          163 YR------GEFGRWSSEILV--M------DPER---------AEQRGQAAREVVNFILDLVERRRT------------EP  207 (404)
T ss_dssp             GT------TTHHHHHHHHHC--C------CGGG---------HHHHHHHHHHHHHHHHHHHHHHHH------------SC
T ss_pred             HH------HHHHHHHHHHhc--c------CChh---------HHHHHHHHHHHHHHHHHHHHHHHh------------CC
Confidence            32      234443333322  0      0111         234556667778888888877765            23


Q ss_pred             cccHHHHHHHH-hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecc
Q 048742          275 NKDFLHFLLEL-KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEES  353 (472)
Q Consensus       275 ~~d~l~~ll~~-~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  353 (472)
                      ..|+++.|+++ ...   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++            
T Consensus       208 ~~dll~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------  272 (404)
T 1z8o_A          208 GDDLLSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------  272 (404)
T ss_dssp             CSSHHHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------
T ss_pred             CCCHHHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------
Confidence            46999999976 332   44699999999999999999999999999999999999999999999953            


Q ss_pred             cCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCcc
Q 048742          354 HIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLE  433 (472)
Q Consensus       354 ~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~  433 (472)
                            ||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||..      
T Consensus       273 ------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~~------  339 (404)
T 1z8o_A          273 ------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDTR------  339 (404)
T ss_dssp             ------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCT------
T ss_pred             ------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCCC------
Confidence                  79999999999999999 55899999999999999999999999999999999999999999999842      


Q ss_pred             ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          434 YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       434 ~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                            .++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       340 ------~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  372 (404)
T 1z8o_A          340 ------GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF  372 (404)
T ss_dssp             ------TCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             ------CccCCCCCCccCCcHHHHHHHHHHHHHHHHHhC
Confidence                  489999999999999999999999999999987


No 50 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=6.8e-59  Score=438.21  Aligned_cols=350  Identities=18%  Similarity=0.223  Sum_probs=276.8

Q ss_pred             CCCChhHHHHHHHHhhCCeEEEecC--CccEEEEcCHHHHHHHHHhccccccCCCCc--------chh-h-----hhccC
Q 048742           52 IEPDFHRYCAKLSRVYGPIFKLKLG--SKICIHISSPSLAKQILKDQDAIFANRDPP--------ASA-L-----VTSYG  115 (472)
Q Consensus        52 ~~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~--------~~~-~-----~~~~~  115 (472)
                      +..+++.++.+++ +||+||+++++  +.++++|+||+.+++|+.+.  .|+.++..        ... .     ....+
T Consensus        18 ~~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (425)
T 2z3t_A           18 DIADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV   94 (425)
T ss_dssp             HHHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH
T ss_pred             hhcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc
Confidence            3457888999986 59999999987  67899999999999999875  56665421        100 0     01111


Q ss_pred             CcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCC
Q 048742          116 LHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSL  193 (472)
Q Consensus       116 ~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~  193 (472)
                      ..+ ++..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  .+++|+...+ ..+++++|+.+ ||.+.
T Consensus        95 ~~~-l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~g~~dl~~~~~~~~~~~vi~~~-~G~~~  169 (425)
T 2z3t_A           95 ENW-LVFLDPPHHTELRSLLTT-EFSPSIVTGLRPRIAELASALLDRLRA--QRRPDLVEGFAAPLPILVISAL-LGIPE  169 (425)
T ss_dssp             TTC-GGGCCHHHHHHHHHHHHG-GGSHHHHHHHHHHHHHHHHHHHHHHTT--SSSCBHHHHTTTHHHHHHHHHH-HTCCG
T ss_pred             ccc-cccCCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHHHHHHHHHH-hCCCH
Confidence            133 445689999999999987 9999999999 9999999999999965  3479998755 68999999998 99876


Q ss_pred             CCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccccc
Q 048742          194 HGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNE  273 (472)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  273 (472)
                      +..      .++.+....+....      ..+| +   .+ ...++..+..+.+.+++.+.++++++            .
T Consensus       170 ~~~------~~~~~~~~~~~~~~------~~~~-~---~~-~~~~~~~~~~~~~~~~~~~~i~~r~~------------~  220 (425)
T 2z3t_A          170 EDH------TWLRANAVALQEAS------TTRA-R---DG-RGYARAEAASQEFTRYFRREVDRRGG------------D  220 (425)
T ss_dssp             GGH------HHHHHHHHHHHTTC------TTCC-C-------HHHHHHHHHHHHHHHHHHHHCC----------------
T ss_pred             HHH------HHHHHHHHHHHhhc------cccC-C---CH-HHHHHHHHHHHHHHHHHHHHHHHHHh------------C
Confidence            421      34444444433211      1112 0   01 11234455666677777777766554            2


Q ss_pred             ccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecc
Q 048742          274 ENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEES  353 (472)
Q Consensus       274 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  353 (472)
                      ...|+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++            
T Consensus       221 ~~~dll~~ll~~~~~---~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------  285 (425)
T 2z3t_A          221 DRDDLLTLLVRARDT---GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------  285 (425)
T ss_dssp             ---CHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------
T ss_pred             CCCCHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------
Confidence            346999999987653   45689999999999999999999999999999999999999999999963            


Q ss_pred             cCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCcc
Q 048742          354 HIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLE  433 (472)
Q Consensus       354 ~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~  433 (472)
                            ||+|||+|+||++|+++ .++|++.+|++++||.||||+.|.++.+++||||++|+||++|||+||..      
T Consensus       286 ------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------  352 (425)
T 2z3t_A          286 ------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAAE------  352 (425)
T ss_dssp             ------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCSS------
T ss_pred             ------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCCC------
Confidence                  89999999999999999 55899999999999999999999999999999999999999999999952      


Q ss_pred             ccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          434 YQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       434 ~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                            .++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       353 ------~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  385 (425)
T 2z3t_A          353 ------RQVGFGLGIHYCLGATLARAEAEIGLRALLDGI  385 (425)
T ss_dssp             ------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             ------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence                  489999999999999999999999999999987


No 51 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=1.7e-58  Score=431.80  Aligned_cols=340  Identities=16%  Similarity=0.243  Sum_probs=275.8

Q ss_pred             CCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcce-EeCCCC----
Q 048742           52 IEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDI-VWMPNG----  125 (472)
Q Consensus        52 ~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----  125 (472)
                      +..+++.++.++ ++||+||++++ ++.+.++|+||+.+++|+.++  .|+.++.............+. ++..+|    
T Consensus        24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  100 (404)
T 2xbk_A           24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAES  100 (404)
T ss_dssp             BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHH
T ss_pred             cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCC
Confidence            456889999999 89999999997 788999999999999999875  355443321101010111231 446689    


Q ss_pred             --hhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccch
Q 048742          126 --PEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSV  201 (472)
Q Consensus       126 --~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  201 (472)
                        +.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+... ++++|+.+.+ ..+++++++. +||.+.+..     
T Consensus       101 ~~~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----  172 (404)
T 2xbk_A          101 GRRQHAETRRLLTP-LFSARRVLEMQPKVEEAADTLLDAFIAQ-GPPGDLHGELTVPFALTVLCE-VIGVPPQRR-----  172 (404)
T ss_dssp             HHHHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHT-CSSEEHHHHTHHHHHHHHHHH-HHTCCGGGH-----
T ss_pred             CCchHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeHHHHHHHHHHHHHHHH-HhCCCHHHH-----
Confidence              999999999998 8999999999 99999999999999752 5689998766 4689999997 799876321     


Q ss_pred             hHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHH
Q 048742          202 GVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHF  281 (472)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~  281 (472)
                       ..+.+....+..   ..     .|           .+..+..+.+.+++.+.++++++            ....|+++.
T Consensus       173 -~~~~~~~~~~~~---~~-----~~-----------p~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~~  220 (404)
T 2xbk_A          173 -AELTTLLAGIAK---LD-----DR-----------EGAVRAQDDLFGYVAGLVEHKRA------------EPGPDIISR  220 (404)
T ss_dssp             -HHHHHHHHHHTB---SS-----CH-----------HHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHH
T ss_pred             -HHHHHHHHHHHh---cc-----Cc-----------HHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHH
Confidence             344443333211   00     01           03445556777788888877764            224689988


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccH
Q 048742          282 LLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFL  361 (472)
Q Consensus       282 ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l  361 (472)
                      | +   +   + .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||
T Consensus       221 l-~---~---~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l  274 (404)
T 2xbk_A          221 L-N---D---G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VM  274 (404)
T ss_dssp             H-H---S---S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HH
T ss_pred             h-h---c---C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HH
Confidence            8 2   1   3 699999999999999999999999999999999999999999999974                  79


Q ss_pred             HHHHHhhhcCCCCCC-CCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          362 QSVVKETLRLHPPLP-LLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       362 ~a~i~E~lRl~~~~~-~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      +|||+|+||++|+++ ..++|++.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..
T Consensus       275 ~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~  342 (404)
T 2xbk_A          275 ARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------------NP  342 (404)
T ss_dssp             HHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS------------CC
T ss_pred             HHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC------------CC
Confidence            999999999999999 45589999999999999999999999999999999999999999999984            24


Q ss_pred             eeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       343 ~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f  374 (404)
T 2xbk_A          343 HLTFGHGIWHCIGAPLARLELRTMFTKLFTRL  374 (404)
T ss_dssp             CCTTEETTEECTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999987


No 52 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=1.6e-59  Score=451.92  Aligned_cols=402  Identities=15%  Similarity=0.232  Sum_probs=286.3

Q ss_pred             CCCCCCCCCCCCccccccccC-----CC-ChhHHHHHHHHhhCC-eEEEecCCc-------cEEEEcCHHHHHHHHHhc-
Q 048742           32 RTPPLPPGPLGLPVLGNLLSI-----EP-DFHRYCAKLSRVYGP-IFKLKLGSK-------ICIHISSPSLAKQILKDQ-   96 (472)
Q Consensus        32 ~~~~~ppgp~~~p~~G~~~~~-----~~-~~~~~~~~~~~~yg~-v~~~~~~~~-------~~v~v~dp~~v~~i~~~~-   96 (472)
                      .+.+.+|||+++|++|++..+     .. +++.++.++.+|||+ ||++++++.       ..+++.|.+..+.++... 
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            567789999999999999875     45 789999999999999 999998743       344445555444444311 


Q ss_pred             ---cccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHh--cCCcc
Q 048742           97 ---DAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKK--VGSPI  170 (472)
Q Consensus        97 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~--~~~~~  170 (472)
                         ...+........ ...+......++..+++.|+++|+++.+ .|++. ++.+ +.+++.++++++.+...  .++.+
T Consensus        86 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~-~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~v  162 (473)
T 3dan_A           86 VEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFF-MLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKA  162 (473)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred             eeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence               111111111111 1111011233456789999999999988 78874 7788 99999999999998753  25689


Q ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHH
Q 048742          171 NLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRI  250 (472)
Q Consensus       171 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  250 (472)
                      |+.+++..+++++++.++||.++...+..   ..+......+...       ...|.+... ..              .+
T Consensus       163 dl~~~~~~~~~~~i~~~~~G~~~~~~~~~---~~~~~~~~~~~~~-------~~~p~~~~~-lp--------------~~  217 (473)
T 3dan_A          163 AFNDVGEQAAFRFLGRAYFNSNPEETKLG---TSAPTLISSWVLF-------NLAPTLDLG-LP--------------WF  217 (473)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSCCGGGSTTT---TCHHHHHHHHHHH-------HHGGGCCCS-CC--------------HH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCCCchhhh---hhHHHHHHHHHHH-------hccchhhhc-ch--------------HH
Confidence            99999999999999999999988652211   3333333332211       111221100 00              01


Q ss_pred             HHHHHHHHHHHhH--hhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhh-cccccchHHHHHHHHHHHh
Q 048742          251 FDSVIVQRMKIDA--AKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTV-LGGTDTTSTTLEWAMAEML  327 (472)
Q Consensus       251 ~~~~i~~~~~~~~--~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~Ag~~tt~~~l~~~l~~L~  327 (472)
                      +.+.+.++.+...  .....++....-.|+++.+++..+    +.+++++++..+++.+. +||++||+++++|++++|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~  293 (473)
T 3dan_A          218 LQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAE----KLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIG  293 (473)
T ss_dssp             HHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHH----HHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccchHhhhhhchhhhHHHHHHHHHHHHHhHh----hcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence            1111111110000  000000000112355555666544    24599999998886666 8899999999999999999


Q ss_pred             h-ChHHHHHHHHHHHHhhcC--CcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccc----cCeecCCCCEE
Q 048742          328 Q-HSEIMRKVQQELDEVVGN--GSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTV----GGYTIPKGSRV  400 (472)
Q Consensus       328 ~-~p~~~~~l~~Ei~~~~~~--~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~----~g~~ip~G~~v  400 (472)
                      + ||++|++|++|++++++.  +..++++++++||||+|||+|+||++|+++... |.+.+|+++    +||.||||+.|
T Consensus       294 ~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v  372 (473)
T 3dan_A          294 LAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEML  372 (473)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEE
T ss_pred             hcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEE
Confidence            9 899999999999998764  357899999999999999999999999999886 558999999    99999999999


Q ss_pred             EEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCC---------cccccChHHHHHHHHHHHHHHhhc
Q 048742          401 FVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSG---------RRICAGISLAEKMVAYVLATLLHS  471 (472)
Q Consensus       401 ~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G---------~r~C~G~~~a~~e~~~~l~~ll~~  471 (472)
                      .++.+++||||++|+||++|||+||++...      ....|+|||.|         +|.|+|++||.+|++++++.|+++
T Consensus       373 ~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~------~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~  446 (473)
T 3dan_A          373 FGYQPFATKDPKVFDRPEEYVPDRFVGDGE------ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRR  446 (473)
T ss_dssp             EEEHHHHTTCTTTSSSTTSCCTTTTSGGGG------GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EechHHhhCCchhcCCcccCCccccCCCcc------cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999998521      22345555555         499999999999999999999998


Q ss_pred             C
Q 048742          472 F  472 (472)
Q Consensus       472 f  472 (472)
                      |
T Consensus       447 f  447 (473)
T 3dan_A          447 Y  447 (473)
T ss_dssp             E
T ss_pred             C
Confidence            6


No 53 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=7.4e-59  Score=437.79  Aligned_cols=353  Identities=19%  Similarity=0.242  Sum_probs=284.1

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC-----cchh-hhhccC-C-cceEeC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP-----PASA-LVTSYG-L-HDIVWM  122 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~-----~~~~-~~~~~~-~-~~~~~~  122 (472)
                      .+..+++.++.++ ++||+||+ + ++.++++|+||+.+++++.++.  |+.++.     .... ....++ . ...++.
T Consensus        23 ~~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   97 (419)
T 1q5d_A           23 GYAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG   97 (419)
T ss_dssp             TTTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT
T ss_pred             hhhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc
Confidence            3567899999999 78999999 6 6778999999999999998764  666541     1101 000111 0 123446


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .+|+.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+ ..+++++|+.+ ||.+.+..    
T Consensus        98 ~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~----  169 (419)
T 1q5d_A           98 LPPEDHARVRKLVNP-SFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAECD----  169 (419)
T ss_dssp             SCHHHHHHHHHHHGG-GGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH----
T ss_pred             CCchHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence            689999999999987 8999999999 9999999999999875  3479988654 78999999998 99876421    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccc-cHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENK-DFL  279 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-d~l  279 (472)
                        ..+.+..+.+......    ..+|+..    . ..++..+..+.+.+++.+.++++++            .... |++
T Consensus       170 --~~~~~~~~~~~~~~~~----~~~P~~~----~-~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~~dll  226 (419)
T 1q5d_A          170 --EKFRRFGSATARALGV----GLVPRVD----E-ETKTLVASVTEGLALLHGVLDERRR------------NPLENDVL  226 (419)
T ss_dssp             --HHHHHHHHHHHHHTTT----TTSSCCC----S-CHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSCHH
T ss_pred             --HHHHHHHHHHHHhccc----ccccCCh----H-HHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCCHH
Confidence              4455555554443221    1233221    1 1234556667788888888887764            2235 999


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCc
Q 048742          280 HFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLH  359 (472)
Q Consensus       280 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp  359 (472)
                      +.|+++...   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  .
T Consensus       227 ~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~  285 (419)
T 1q5d_A          227 TMLLQAEAD---GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------G  285 (419)
T ss_dssp             HHHHHHHHS---STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------G
T ss_pred             HHHHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------H
Confidence            999987643   4569999999999999999999999999999999999999999999995                  2


Q ss_pred             cHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCcc
Q 048742          360 FLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNF  439 (472)
Q Consensus       360 ~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~  439 (472)
                      ||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||-            .
T Consensus       286 ~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~  353 (419)
T 1q5d_A          286 LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT------------S  353 (419)
T ss_dssp             GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC------------T
T ss_pred             HHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC------------C
Confidence            8999999999999999955689999999999999999999999999999999999999999999941            2


Q ss_pred             ceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          440 RYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       440 ~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .++|||+|+|.|+|++||++|++++++.||++|
T Consensus       354 ~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  386 (419)
T 1q5d_A          354 ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF  386 (419)
T ss_dssp             TCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999987


No 54 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=6.8e-59  Score=435.61  Aligned_cols=343  Identities=16%  Similarity=0.198  Sum_probs=280.8

Q ss_pred             CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHH
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLR  132 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  132 (472)
                      ..+++.++.++++ ||+||++.  . ++++|+||+.+++++.++. .|+.++... ..  ..+. +.++..+|+.|+++|
T Consensus        17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~--~~~~-~~l~~~~g~~h~~~R   87 (398)
T 2xkr_A           17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PD--QPAL-PMMIDMDDPAHLLRR   87 (398)
T ss_dssp             CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TT--SCCC-SSGGGCCTTHHHHHH
T ss_pred             ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cc--cccc-ccccccCchHHHHHH
Confidence            4678999999987 99999764  3 7899999999999998754 566554322 11  1122 334566899999999


Q ss_pred             HHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHH-HHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHH
Q 048742          133 KVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQ-MFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVG  210 (472)
Q Consensus       133 ~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  210 (472)
                      +.+.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+... ...+++++|+.+ ||.+.+..      .++.+...
T Consensus        88 ~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~  157 (398)
T 2xkr_A           88 KLVNA-GFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR------DMFLRWSD  157 (398)
T ss_dssp             HHHGG-GSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH------HHHHHHHH
T ss_pred             HHhhh-hhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH------HHHHHHHH
Confidence            99987 9999999999 9999999999999865  457999955 467999999998 99986421      44555555


Q ss_pred             HHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCC
Q 048742          211 EIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGE  290 (472)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  290 (472)
                      .+......    .++|        ...++..+..+.+.+++.+.++++++            ....|+++.|+++..+  
T Consensus       158 ~~~~~~~~----~~~p--------~~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~~ll~~~~~--  211 (398)
T 2xkr_A          158 DLVTFLSS----HVSQ--------EDFQITMDAFAAYNDFTRATIAARRA------------DPTDDLVSVLVSSEVD--  211 (398)
T ss_dssp             HHHHHHTS----CCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHHCCBT--
T ss_pred             HHHhccCc----ccch--------hhHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHhhcc--
Confidence            44433211    0111        11234555667778888888877764            2357999999976542  


Q ss_pred             CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhc
Q 048742          291 DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLR  370 (472)
Q Consensus       291 ~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  370 (472)
                       +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|+||
T Consensus       212 -~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  272 (398)
T 2xkr_A          212 -GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLR  272 (398)
T ss_dssp             -TBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHh
Confidence             45699999999999999999999999999999999999999999999975                  89999999999


Q ss_pred             CCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCccc
Q 048742          371 LHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRI  450 (472)
Q Consensus       371 l~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~  450 (472)
                      ++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .++|||.|+|.
T Consensus       273 l~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~~l~FG~G~r~  339 (398)
T 2xkr_A          273 WTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN------------SHLAFGFGTHF  339 (398)
T ss_dssp             HHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC------------CCCTTCCSTTC
T ss_pred             hcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC------------CCCcCCCCCcC
Confidence            9999997 5899999999999999999999999999999999999999999999752            38999999999


Q ss_pred             ccChHHHHHHHHHHHHHHhhcC
Q 048742          451 CAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       451 C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|++||++|++++++.||++|
T Consensus       340 C~G~~lA~~e~~~~l~~ll~~f  361 (398)
T 2xkr_A          340 CLGNQLARLELSLMTERVLRRL  361 (398)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999987


No 55 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=5.6e-59  Score=440.22  Aligned_cols=364  Identities=17%  Similarity=0.204  Sum_probs=283.9

Q ss_pred             CCCCCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEe--------cCCccEEEEcCHHHHHHHHHhccccccCCC
Q 048742           33 TPPLPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLK--------LGSKICIHISSPSLAKQILKDQDAIFANRD  104 (472)
Q Consensus        33 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~--------~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~  104 (472)
                      ....||+|..+++++....-..+|+.++.++ ++||+|+++.        +|+.++++|+||+.+++++++. ..|+.++
T Consensus        16 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~   93 (433)
T 3ivy_A           16 TVPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE   93 (433)
T ss_dssp             ----CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred             ccCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence            3456777777777766554456799999999 7899999998        4447899999999999999765 4566554


Q ss_pred             Ccchhh--------hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHH
Q 048742          105 PPASAL--------VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQ  175 (472)
Q Consensus       105 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~  175 (472)
                      ......        ....+ ...++..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~  169 (433)
T 3ivy_A           94 NGVIPRFKNDIAREDIEVQ-RFVMLNMDAPHHTRLRKIISR-GFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQ  169 (433)
T ss_dssp             TCSCCCCCTTCCHHHHHGG-GGSGGGCCTTHHHHHHHHHGG-GSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHH
T ss_pred             ccccccccccccccccccc-cCCccccChHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHH
Confidence            322111        11111 234457789999999999987 9999999999 9999999999999975  467999998


Q ss_pred             H-HHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHH
Q 048742          176 M-FLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSV  254 (472)
Q Consensus       176 ~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (472)
                      + ..+++++|+.+ ||.+.         .+.... ......+..    ...|....       ....+..+.+.+++.+.
T Consensus       170 ~~~~~~~~vi~~l-~G~~~---------~~~~~~-~~~~~~~~~----~~~p~~~~-------~~~~~~~~~~~~~~~~~  227 (433)
T 3ivy_A          170 VSCELPLQAIAGL-LGVPQ---------EDRGKL-FHWSNEMTG----NEDPEYAH-------IDPKASSAELIGYAMKM  227 (433)
T ss_dssp             TTSHHHHHHHHHH-HTCCH---------HHHHHH-HHHHTTCSC----CCCGGGTT-------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-cCCCH---------HHHHHH-HHHHHHHhc----cCCchhhh-------HHHHHHHHHHHHHHHHH
Confidence            8 99999999996 88642         122111 111111111    11222111       13445566777888888


Q ss_pred             HHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHH
Q 048742          255 IVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMR  334 (472)
Q Consensus       255 i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~  334 (472)
                      ++++++            ....|+++.|++...+   +..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus       228 i~~r~~------------~~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~  292 (433)
T 3ivy_A          228 AEEKAK------------NPADDIVTQLIQADID---GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWE  292 (433)
T ss_dssp             HHHC-------------------CHHHHHSCC-----CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHhc------------CCCCcHHHHHHhhhcC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHH
Confidence            877654            2356899999976443   4579999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCC
Q 048742          335 KVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAW  414 (472)
Q Consensus       335 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~  414 (472)
                      ++++|++                    ++||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|
T Consensus       293 ~l~~E~~--------------------~a~i~E~LRl~p~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f  351 (433)
T 3ivy_A          293 LYKKVRP--------------------ETAADEIVRWATPVTAF-QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF  351 (433)
T ss_dssp             HHHHHCC--------------------TTHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS
T ss_pred             HHHhCcc--------------------cchhHHHhhhCcchhce-eeEECCCEEECCEEECCCCEEEEChhhhcCCchhC
Confidence            9999975                    68999999999999985 79999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccccCCccccCCccceeecC-CCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          415 QNPLEFHPERFLKELGKLEYQGTNFRYLPFG-SGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       415 ~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +||++|||+||..            .++||| +|+|.|+|++||.+|++++++.|+++|
T Consensus       352 ~dp~~F~p~R~~~------------~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f  398 (433)
T 3ivy_A          352 QDPFTFNILRNPN------------PHVGFGGTGAHYCIGANLARMTINLIFNAVADHM  398 (433)
T ss_dssp             SSTTSCCTTCCSC------------CCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcCccCCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999842            489999 999999999999999999999999987


No 56 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=2.4e-58  Score=435.54  Aligned_cols=350  Identities=16%  Similarity=0.176  Sum_probs=284.9

Q ss_pred             CChhHHHHHHHHhhCCeEEEecC-------CccEEEEcCHHHHHHHHHhccccccCCCCc--c-hhhhhccCCcceEeCC
Q 048742           54 PDFHRYCAKLSRVYGPIFKLKLG-------SKICIHISSPSLAKQILKDQDAIFANRDPP--A-SALVTSYGLHDIVWMP  123 (472)
Q Consensus        54 ~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~  123 (472)
                      .+++.++.+++ +||+||+++++       +.++++|+||+.+++|+.++ ..|+.++..  . ..........+ ++..
T Consensus        44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~  120 (435)
T 2wm5_A           44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVL  120 (435)
T ss_dssp             HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGC
T ss_pred             CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccC
Confidence            56888999996 69999999986       66899999999999999885 456665421  1 11111100123 3456


Q ss_pred             CChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhc-CCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccc
Q 048742          124 NGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKV-GSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       124 ~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~-~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      +|+.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+.... ++.+|+.+.+ ..+++++++.+ ||.+.+..    
T Consensus       121 dg~~h~~~R~~l~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~----  194 (435)
T 2wm5_A          121 DDPRHQRLRSIVSR-AFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKADH----  194 (435)
T ss_dssp             CTTHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH----
T ss_pred             CcHHHHHHHHHhHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH----
Confidence            89999999999998 9999999999 999999999999997642 3489999876 78999999999 99987432    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLH  280 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  280 (472)
                        .++.+....+....        .|.+.     ...++..+..+.+.+++.+.++++++            ....|+++
T Consensus       195 --~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~  247 (435)
T 2wm5_A          195 --QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRV------------NHHDDLTS  247 (435)
T ss_dssp             --HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHH
T ss_pred             --HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhc------------CCCCCHHH
Confidence              44555555444321        13211     11234556667788888888887765            23479999


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCcc
Q 048742          281 FLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHF  360 (472)
Q Consensus       281 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~  360 (472)
                      .|++...+   +..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                 +|
T Consensus       248 ~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~  307 (435)
T 2wm5_A          248 SLVEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GL  307 (435)
T ss_dssp             HHHHCCBT---TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HH
T ss_pred             HHHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hH
Confidence            99976432   45699999999999999999999999999999999999999999999986                 38


Q ss_pred             HHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          361 LQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       361 l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      |+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||-            ..
T Consensus       308 l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~------------~~  374 (435)
T 2wm5_A          308 APTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNP------------NP  374 (435)
T ss_dssp             HHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCCS------------CC
T ss_pred             HHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCCC------------CC
Confidence            9999999999999999 5589999999999999999999999999999999999999999999931            25


Q ss_pred             eeecCC-CcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGS-GRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~-G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||+ |+|.|+|++||++|++++++.||++|
T Consensus       375 ~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f  407 (435)
T 2wm5_A          375 HLGFGGGGAHFCLGANLARREIRVAFDELRRQM  407 (435)
T ss_dssp             CCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            899999 99999999999999999999999987


No 57 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=3.3e-58  Score=430.82  Aligned_cols=344  Identities=17%  Similarity=0.242  Sum_probs=275.4

Q ss_pred             CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhh-----hccCC-cceEeCCCCh
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALV-----TSYGL-HDIVWMPNGP  126 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~  126 (472)
                      ..+++.++.++ ++||+|++ +  |.+.++|+||+.+++++.+.  .|+.++.......     ...+. ...++..+|+
T Consensus        12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   85 (397)
T 3buj_A           12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEP   85 (397)
T ss_dssp             HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTT
T ss_pred             ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCCch
Confidence            35788888877 58999998 6  57899999999999999863  4544321110000     00110 1234466899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHH-HHHHHHHHHHHHHhcCCCCCCcccchhHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQ-MFLAILNVVMNMLWGSSLHGEERSSVGVE  204 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  204 (472)
                      .|+++|+.+.+ .|++..++.+ +.+.+.++++++.+..  ++++|+... ...+++++++.+ ||.+.+..      ..
T Consensus        86 ~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~------~~  155 (397)
T 3buj_A           86 DHGRLRGVVGP-AFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAADW------GA  155 (397)
T ss_dssp             HHHHHHHHHGG-GSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH------HH
T ss_pred             hHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH------HH
Confidence            99999999998 9999999999 9999999999999975  568998755 468999999998 99876431      34


Q ss_pred             HHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHH
Q 048742          205 FRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLE  284 (472)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  284 (472)
                      +......+......     .++      . ...++..+..+.+.+++.+.++++++.            ...|+++.|++
T Consensus       156 ~~~~~~~~~~~~~~-----~~~------~-~~~~~~~~~~~~~~~~~~~~i~~r~~~------------~~~dll~~ll~  211 (397)
T 3buj_A          156 VGRWSRDVGRTLDR-----GAS------A-EDMRRGHAAIAEFADYVERALARRRRE------------GGEDLLALMLD  211 (397)
T ss_dssp             HHHHHHHHHGGGCS-----SCC------H-HHHHHHHHHHHHHHHHHHHHHHHHHHH------------CCCSHHHHHHH
T ss_pred             HHHHHHHHHhhcCC-----CCC------h-HHHHHHHHHHHHHHHHHHHHHHHHHcC------------CCCCHHHHHHH
Confidence            44444443322110     011      1 112345566677888888888877652            24699999998


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHH
Q 048742          285 LKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSV  364 (472)
Q Consensus       285 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  364 (472)
                      +...   +. ++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+||
T Consensus       212 ~~~~---~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~  269 (397)
T 3buj_A          212 AHDR---GL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQA  269 (397)
T ss_dssp             HHHT---TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHH
T ss_pred             hhhc---CC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHH
Confidence            7643   33 99999999999999999999999999999999999999999999963                  89999


Q ss_pred             HHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          365 VKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       365 i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      |+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .++||
T Consensus       270 i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~------------~~~~F  336 (397)
T 3buj_A          270 VEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDPV------------PSMSF  336 (397)
T ss_dssp             HHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCCC------------CCSTT
T ss_pred             HHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCCC------------CCCCC
Confidence            999999999999 55899999999999999999999999999999999999999999999952            47999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||++|++++++.| ++|
T Consensus       337 G~G~r~C~G~~lA~~e~~~~l~~l-~~f  363 (397)
T 3buj_A          337 GAGMRYCLGSYLARTQLRAAVAAL-ARL  363 (397)
T ss_dssp             CCGGGCCTTHHHHHHHHHHHHHHH-HTS
T ss_pred             CCCCccCCCHHHHHHHHHHHHHHH-hcC
Confidence            999999999999999999999999 887


No 58 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=3.3e-59  Score=438.76  Aligned_cols=348  Identities=20%  Similarity=0.254  Sum_probs=281.7

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCC-Ccchhh--hhc--------cCCcc
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRD-PPASAL--VTS--------YGLHD  118 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~-~~~~~~--~~~--------~~~~~  118 (472)
                      .+..+++..+.++ ++||+||++++ ++.++++|+||+.+++++.++.  ++.+. ......  ...        .+..+
T Consensus        14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence            4567899999999 99999999997 7889999999999999998753  22222 011000  000        01012


Q ss_pred             eEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCC
Q 048742          119 IVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGE  196 (472)
Q Consensus       119 ~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~  196 (472)
                      .++..+|+.|+++|+.+.+ .|++..++.+ +.+.+.++++++.+.. .++++|+.+.+. .+++++++. +||.+.+..
T Consensus        91 ~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~  167 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTLVAQ-ALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEARL  167 (411)
T ss_dssp             SGGGCCHHHHHHHHHHHTT-TSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGGH
T ss_pred             ccccCCcHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHHHH
Confidence            3456789999999999997 9999999999 9999999999998863 267899998876 489999996 799875321


Q ss_pred             cccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccc
Q 048742          197 ERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENK  276 (472)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  276 (472)
                            .++......+....        .+          .+...+..+.+.+++.+.++++++            ....
T Consensus       168 ------~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~  211 (411)
T 1gwi_A          168 ------PRLKVLFEKFFSTQ--------TP----------PEEVVATLTELASIMTDTVAAKRA------------APGD  211 (411)
T ss_dssp             ------HHHHHHHHHHHCTT--------SC----------HHHHHHHHHHHHHHHHHHHHHHHH------------SCCS
T ss_pred             ------HHHHHHHHHHhccC--------CC----------hHHHHHHHHHHHHHHHHHHHHHHh------------CCCC
Confidence                  34444444332100        00          134455666778888888877664            2347


Q ss_pred             cHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCC
Q 048742          277 DFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIP  356 (472)
Q Consensus       277 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~  356 (472)
                      |+++.|+++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                
T Consensus       212 d~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~----------------  272 (411)
T 1gwi_A          212 DLTSALIQASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE----------------  272 (411)
T ss_dssp             SHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS----------------
T ss_pred             CHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh----------------
Confidence            899999976532   4569999999999999999999999999999999999999999999873                


Q ss_pred             CCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCC-CCCCCCCCCccccccCCcccc
Q 048742          357 KLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPERFLKELGKLEYQ  435 (472)
Q Consensus       357 ~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~  435 (472)
                        +||+|||+|+||++|+++..++|++.+|++++||.||||+.|.++.+++||||++| +||++||||||..        
T Consensus       273 --~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~--------  342 (411)
T 1gwi_A          273 --AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG--------  342 (411)
T ss_dssp             --SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--------
T ss_pred             --HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--------
Confidence              37999999999999999976689999999999999999999999999999999999 9999999999952        


Q ss_pred             CCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          436 GTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       436 ~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                         ..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       343 ---~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f  376 (411)
T 1gwi_A          343 ---NRHISFGHGPHVCPGAALSRMEAGVALPALYARF  376 (411)
T ss_dssp             ---SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             ---CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhC
Confidence               2589999999999999999999999999999987


No 59 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=2.4e-59  Score=443.15  Aligned_cols=357  Identities=21%  Similarity=0.287  Sum_probs=272.3

Q ss_pred             CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHH
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLR  132 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  132 (472)
                      ..+++.++.++ ++||+|+++..++  .++|+||+.+++|++++.. |+.+....... ...+ .+.++..+|+.|+++|
T Consensus        52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~-~~~~-~~~l~~~dg~~h~~~R  125 (441)
T 3nc3_A           52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAE-PVMR-GPVLAQMHGKEHSAKR  125 (441)
T ss_dssp             HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCC-CSCC--------------CCH
T ss_pred             hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccc-cccC-CCccccCCcHHHHHHH
Confidence            45778888776 6899999987666  7999999999999988754 66554332211 1122 2345677899999999


Q ss_pred             HHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHH-HHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHH
Q 048742          133 KVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQ-MFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVG  210 (472)
Q Consensus       133 ~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  210 (472)
                      +++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+... ...+++++++. +||.+....      .++.....
T Consensus       126 r~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~------~~~~~~~~  195 (441)
T 3nc3_A          126 RIVVR-SFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH------EKISEWHS  195 (441)
T ss_dssp             HHHHH-HHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGGH------HHHHHHHH
T ss_pred             HHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH------HHHHHHHH
Confidence            99988 9999999999 9999999999988865  567887544 45688999998 589865322      44555555


Q ss_pred             HHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCC
Q 048742          211 EIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGE  290 (472)
Q Consensus       211 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  290 (472)
                      .+.........    +       ....+...+..+.+.+++.+.++++++            ....|+++.|+++..+  
T Consensus       196 ~~~~~~~~~~~----~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~------------~~~~Dll~~Ll~~~~~--  250 (441)
T 3nc3_A          196 GVADFITSISQ----S-------PEARAHSLWCSEQLSQYLMPVIKERRV------------NPGSDLISILCTSEYE--  250 (441)
T ss_dssp             HHHHHHHCSCC----C-------HHHHHHHHHHHHHHHHHHHHHHHHHTT------------SCCSSHHHHHCC------
T ss_pred             HHHHhcccccC----C-------hHHHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHhhcc--
Confidence            54443322111    0       011234556667788888888877754            3457999999876542  


Q ss_pred             CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhc
Q 048742          291 DKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLR  370 (472)
Q Consensus       291 ~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  370 (472)
                       +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  +||++||+|+||
T Consensus       251 -~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LR  311 (441)
T 3nc3_A          251 -GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLR  311 (441)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhh
Confidence             5569999999999999999999999999999999999999999999986                  599999999999


Q ss_pred             CCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCccc
Q 048742          371 LHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRI  450 (472)
Q Consensus       371 l~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~  450 (472)
                      ++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||+..+...  ...+..++|||+|+|.
T Consensus       312 l~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~--~~~~~~~l~FG~G~r~  388 (441)
T 3nc3_A          312 YKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSA--FSGAARHLAFGSGIHN  388 (441)
T ss_dssp             HSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGT--TSSSCSSCTTCCGGGC
T ss_pred             cCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccc--cCCCCCcccCCCCCcc
Confidence            9999998 479999999999999999999999999999999999999999999997643211  1125679999999999


Q ss_pred             ccChHHHHHHHHHHHHHHhhcC
Q 048742          451 CAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       451 C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|++||++|++++++.|+++|
T Consensus       389 C~G~~lA~~e~~~~l~~ll~~f  410 (441)
T 3nc3_A          389 CVGTAFAKNEIEIVANIVLDKM  410 (441)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999987


No 60 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=1e-58  Score=434.79  Aligned_cols=342  Identities=18%  Similarity=0.260  Sum_probs=276.1

Q ss_pred             CChhHHHHHHHHhhCCeEEEecCC--ccEEEEcCHHHHHHHHHhccccccCCCCcchh---hhhccCC-cceEeCCCChh
Q 048742           54 PDFHRYCAKLSRVYGPIFKLKLGS--KICIHISSPSLAKQILKDQDAIFANRDPPASA---LVTSYGL-HDIVWMPNGPE  127 (472)
Q Consensus        54 ~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~  127 (472)
                      ++++.++.+++ +||+|+++++++  .+.++|++|+.+++|+.+.  .|+.++.....   .....+. ...++..+|+.
T Consensus        27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  103 (411)
T 2dkk_A           27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPD  103 (411)
T ss_dssp             SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTH
T ss_pred             ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCchH
Confidence            45668999987 899999999764  7799999999999999863  45443322100   0011111 23345679999


Q ss_pred             HHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCCcccchhHHH
Q 048742          128 WRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGEERSSVGVEF  205 (472)
Q Consensus       128 ~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~  205 (472)
                      |+++|+.+.+ .|++..++.+ +.+.+.++++++.+... ++.+|+.+.+. .+++++|+. +||.+.+..      .++
T Consensus       104 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~------~~~  174 (411)
T 2dkk_A          104 HNRLRRAVAG-AFTVGATKRLRPRAQEILDGLVDGILAE-GPPADLVERVLEPFPIAVVSE-VMGVPAADR------ERV  174 (411)
T ss_dssp             HHHHHHHHGG-GSSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH------HHH
T ss_pred             HHHHHHHhhH-hhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHHH------HHH
Confidence            9999999998 8999999999 99999999999999763 55899998776 699999998 599876421      333


Q ss_pred             HHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHH
Q 048742          206 RQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLEL  285 (472)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~  285 (472)
                      ......    +..     ..+         ..++..+..+.+.+++.+.++++++            ....|+++.|+++
T Consensus       175 ~~~~~~----~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~------------~~~~dll~~ll~~  224 (411)
T 2dkk_A          175 HSWTRQ----IIS-----TSG---------GAEAAERAKRGLYGWITETVRARAG------------SEGGDVYSMLGAA  224 (411)
T ss_dssp             HHHHGG----GCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTT------------CCSSCHHHHHHHH
T ss_pred             HHHHHH----HHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHh
Confidence            322221    111     111         0134455666777777777766553            2346999999987


Q ss_pred             hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHH
Q 048742          286 KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVV  365 (472)
Q Consensus       286 ~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  365 (472)
                       .+   +..++++++.+++..+++|| |||+++++|++++|++||++|++|++|++                  ||++||
T Consensus       225 -~~---~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i  281 (411)
T 2dkk_A          225 -VG---RGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTAL  281 (411)
T ss_dssp             -HH---TTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHHH
T ss_pred             -cC---CCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHH
Confidence             33   45689999999999999999 99999999999999999999999999974                  899999


Q ss_pred             HhhhcCCCCCCCC-CCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          366 KETLRLHPPLPLL-VPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       366 ~E~lRl~~~~~~~-~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      +|+||++|+++.. ++|++.+|++++|+.||||+.|.++.+++||||++|+||++|||+||..            .++||
T Consensus       282 ~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~~------------~~l~F  349 (411)
T 2dkk_A          282 DELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPN------------PHLAY  349 (411)
T ss_dssp             HHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSSC------------CCCTT
T ss_pred             HHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCCC------------CCCCC
Confidence            9999999999955 5799999999999999999999999999999999999999999999962            48999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||++|++++++.|+++|
T Consensus       350 G~G~r~C~G~~lA~~e~~~~l~~ll~~f  377 (411)
T 2dkk_A          350 GNGHHFCTGAVLARMQTELLVDTLLERL  377 (411)
T ss_dssp             CCSTTSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCcCHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999999999987


No 61 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=9.9e-59  Score=435.58  Aligned_cols=345  Identities=19%  Similarity=0.204  Sum_probs=277.9

Q ss_pred             CCChhHHHHHHHHhhCCeE-----EEecCCccEEEEcCHHHHHHHHHhccccccCCCCcc-hhh--hh-c-cCCcceEeC
Q 048742           53 EPDFHRYCAKLSRVYGPIF-----KLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPA-SAL--VT-S-YGLHDIVWM  122 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~-----~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~  122 (472)
                      ..+++.++.+++ +||+||     ++++  .++++|+||+.+++++.+. ..|+.++... ...  .. . .+..+ ++.
T Consensus        24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-l~~   98 (414)
T 2uuq_A           24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPP-MVM   98 (414)
T ss_dssp             TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCC-GGG
T ss_pred             ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccc-ccc
Confidence            467899999985 799999     8876  5789999999999999886 5566664331 111  11 1 22234 445


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchH-HHHHHHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLG-EQMFLAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~-~~~~~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  .+.+|+. ++...+++++++. +||.+.+..    
T Consensus        99 ~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~----  170 (414)
T 2uuq_A           99 QDPPVHTEFRKLVSR-GFTPRQVETVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAH-YLGVPEEDW----  170 (414)
T ss_dssp             CCTTHHHHHHHHHHT-TSSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEHHHHTTTHHHHHHHHH-HTTCCGGGH----
T ss_pred             CCchhHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHH-HhCCCHHHH----
Confidence            689999999999987 9999999999 9999999999999976  3569997 4567999999999 699877521    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchh-hhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLF-PTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFL  279 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l  279 (472)
                        .++.+....+...       ..+ |..         +...+..+.+.+++.+.++++++            ....|++
T Consensus       171 --~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll  220 (414)
T 2uuq_A          171 --TQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRT------------EPADDAI  220 (414)
T ss_dssp             --HHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTT------------SCCSSHH
T ss_pred             --HHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHH
Confidence              3444444443321       011 211         12234455677777887777654            2347999


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCc
Q 048742          280 HFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLH  359 (472)
Q Consensus       280 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp  359 (472)
                      +.|+++... .++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  
T Consensus       221 ~~ll~~~~~-~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------  281 (414)
T 2uuq_A          221 SHLVAAGVG-ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE------------------  281 (414)
T ss_dssp             HHHHHTTTT-CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------
T ss_pred             HHHHhcccc-cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------
Confidence            999987531 1244689999999999999999999999999999999999999999999963                  


Q ss_pred             cHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCC-CCCCCCCCCccccccCCccccCCc
Q 048742          360 FLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAW-QNPLEFHPERFLKELGKLEYQGTN  438 (472)
Q Consensus       360 ~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~p~R~l~~~~~~~~~~~~  438 (472)
                      ||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++| +||++||||||..           
T Consensus       282 ~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~-----------  349 (414)
T 2uuq_A          282 GIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPR-----------  349 (414)
T ss_dssp             GHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCC-----------
T ss_pred             HHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCC-----------
Confidence            99999999999999999 5589999999999999999999999999999999999 9999999999852           


Q ss_pred             cceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          439 FRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       439 ~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                       .++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       350 -~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  382 (414)
T 2uuq_A          350 -NILTFSHGAHHCLGAAAARMQCRVALTELLARC  382 (414)
T ss_dssp             -SCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             -CCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence             489999999999999999999999999999987


No 62 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=2e-58  Score=438.31  Aligned_cols=356  Identities=20%  Similarity=0.244  Sum_probs=281.4

Q ss_pred             hhHHHHHHHHhhCCeE--EEe-cCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhh--------cc-C---CcceE
Q 048742           56 FHRYCAKLSRVYGPIF--KLK-LGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVT--------SY-G---LHDIV  120 (472)
Q Consensus        56 ~~~~~~~~~~~yg~v~--~~~-~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~--------~~-~---~~~~~  120 (472)
                      ++..+.++ ++||+|+  +++ +++.++++|++++++++++++. ..|+.++........        .. +   ....+
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l  124 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL  124 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence            78888888 6789999  888 6778999999999999999876 566665533221000        00 0   12345


Q ss_pred             eCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcc
Q 048742          121 WMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEER  198 (472)
Q Consensus       121 ~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~  198 (472)
                      +..+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+... ++.+|+.+.+ ..+++++|+.+ ||.+.+.   
T Consensus       125 ~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~---  198 (450)
T 3tkt_A          125 VQMDAPKHPKLRRLTQD-WFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQI-LGVPPED---  198 (450)
T ss_dssp             GGCCTTHHHHHHHHHHT-TTSHHHHGGGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHHH-TTCCGGG---
T ss_pred             ccCCCHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHHH-cCCChhH---
Confidence            67789999999999987 9999999999 99999999999999764 6789998888 68999999985 8976432   


Q ss_pred             cchhHHHHHHHHHHHHHhCCCcccchhhhccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccc
Q 048742          199 SSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLD-LQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKD  277 (472)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d  277 (472)
                        . ..+.+..+.+..   .. .....++..++. +....+...+..+.+.+++.+.++++++            ....|
T Consensus       199 --~-~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~d  259 (450)
T 3tkt_A          199 --E-PKMLFLTQQMFG---GQ-DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRR------------NPTDD  259 (450)
T ss_dssp             --H-HHHHHHHHTTSC---CC-----------------HHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSS
T ss_pred             --H-HHHHHHHHHHhc---cc-cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCC
Confidence              1 334333333211   11 111122221111 1122345666677788888888877765            34578


Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCC
Q 048742          278 FLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPK  357 (472)
Q Consensus       278 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~  357 (472)
                      +++.|++...+   +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|++                
T Consensus       260 ll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------------  320 (450)
T 3tkt_A          260 VATVIANAVVD---GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN----------------  320 (450)
T ss_dssp             HHHHHHTCEET---TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------
T ss_pred             HHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH----------------
Confidence            99999876542   45699999999999999999999999999999999999999999999963                


Q ss_pred             CccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCC
Q 048742          358 LHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGT  437 (472)
Q Consensus       358 lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~  437 (472)
                        |+++||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||.           
T Consensus       321 --~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~-----------  386 (450)
T 3tkt_A          321 --LLPGIVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA-----------  386 (450)
T ss_dssp             --GHHHHHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT-----------
T ss_pred             --HHHHHHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC-----------
Confidence              899999999999999995 579999999999999999999999999999999999999999999943           


Q ss_pred             ccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          438 NFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       438 ~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                       ..++|||.|+|.|+|++||.+|++++++.||++|
T Consensus       387 -~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  420 (450)
T 3tkt_A          387 -NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV  420 (450)
T ss_dssp             -TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             -CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhC
Confidence             2489999999999999999999999999999986


No 63 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=3.3e-58  Score=433.93  Aligned_cols=349  Identities=17%  Similarity=0.184  Sum_probs=280.7

Q ss_pred             cCCCChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHH
Q 048742           51 SIEPDFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWR  129 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (472)
                      .+..+++.++.++++++| +|+++..++ ..++|+||+.+++|+++. +.|+.+...........+ ...++..+|+.|+
T Consensus        35 ~~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~-~~~~~~~dg~~h~  111 (421)
T 3lxh_A           35 GLEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAY-DMVPTKLDPPEHT  111 (421)
T ss_dssp             TGGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHC-CCTTTTCCTTTHH
T ss_pred             hhhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCccccccc-ccCCccCCcHHHH
Confidence            344689999999988766 899998876 589999999999999654 466665532211111111 2334567899999


Q ss_pred             HHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHHHHH
Q 048742          130 QLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVEFRQ  207 (472)
Q Consensus       130 ~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  207 (472)
                      ++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+ ..++.++++. +||.+.+..      ..+.+
T Consensus       112 ~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~------~~~~~  181 (421)
T 3lxh_A          112 PYRKAIDK-GLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVEDA------TKLGL  181 (421)
T ss_dssp             HHHHHHHH-HHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGGGH------HHHHH
T ss_pred             HHHHHHhh-hcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHHHH------HHHHH
Confidence            99999998 9999999999 9999999999998865  4678876665 4567777765 589765322      45555


Q ss_pred             HHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhh
Q 048742          208 VVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQ  287 (472)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~  287 (472)
                      ....+....      ..+|..       ..+...+..+.+.+++.+.++++++            ....|+++.|+++..
T Consensus       182 ~~~~~~~~~------~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~~ll~~~~  236 (421)
T 3lxh_A          182 LANEMTRPS------GNTPEE-------QGRSLEAANKGFFEYVAPIIAARRG------------GSGTDLITRILNVEI  236 (421)
T ss_dssp             HHHHHHSCC------CSSHHH-------HHHHHHHHHHHHHHHHHHHHHHHTT------------CCCCSHHHHHHTSCB
T ss_pred             HHHHHhccc------cCCCch-------hHHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHhhhc
Confidence            444443211      112211       1345566677788888888877765            345799999997654


Q ss_pred             cCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHh
Q 048742          288 QGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKE  367 (472)
Q Consensus       288 ~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  367 (472)
                      +   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+|||+|
T Consensus       237 ~---~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  295 (421)
T 3lxh_A          237 D---GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEE  295 (421)
T ss_dssp             T---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHH
T ss_pred             c---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHH
Confidence            2   55699999999999999999999999999999999999999999999986                  89999999


Q ss_pred             hhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCC
Q 048742          368 TLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSG  447 (472)
Q Consensus       368 ~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G  447 (472)
                      +||++|++ . ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||-            ..|+|||+|
T Consensus       296 ~lRl~p~~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G  361 (421)
T 3lxh_A          296 LFRRFAVV-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRD------------VTHSTFAQG  361 (421)
T ss_dssp             HHHHCCCB-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCSC------------CCCCTTCCG
T ss_pred             HHHhcCcc-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCCC------------CCCCCCCCc
Confidence            99999999 4 479999999999999999999999999999999999999999999942            369999999


Q ss_pred             cccccChHHHHHHHHHHHHHHhhcC
Q 048742          448 RRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       448 ~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|.|+|++||++|++++++.||++|
T Consensus       362 ~r~C~G~~lA~~e~~~~l~~ll~~f  386 (421)
T 3lxh_A          362 PHRCAGMHLARLEVTVMLQEWLARI  386 (421)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999987


No 64 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=7.4e-58  Score=427.70  Aligned_cols=344  Identities=16%  Similarity=0.199  Sum_probs=271.0

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhcccccc-C-CCCc--chhh---hhccCCcceEeC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFA-N-RDPP--ASAL---VTSYGLHDIVWM  122 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~-~-~~~~--~~~~---~~~~~~~~~~~~  122 (472)
                      .+..+++..+.++ ++||+||++++ ++.+.++|+||+.+++++.++.  |+ . ++..  ....   .......+++ .
T Consensus        13 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~-~   88 (396)
T 1n40_A           13 ARGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMG-N   88 (396)
T ss_dssp             CCSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHH-H
T ss_pred             ccccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhh-h
Confidence            4567899999999 99999999997 7889999999999999998752  44 3 2211  1000   0010112333 2


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHH-HHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMF-LAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .   .|+++|+.+.+ .|++. ++.+ +.+.+.++++++.+... ++++|+.+.+. .+++++++. +||.+.+..    
T Consensus        89 ~---~h~~~R~~~~~-~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~----  157 (396)
T 1n40_A           89 I---ADAGLRKAVMK-AITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQEDG----  157 (396)
T ss_dssp             H---HHTTCHHHHHH-HTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGGGH----
T ss_pred             H---HHHHHHHHHHH-hhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChhhH----
Confidence            2   99999999998 89988 9999 99999999999999763 67899986654 789999998 899876421    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLH  280 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  280 (472)
                        .++.+..+.+....      ...|          .++..+..+.+ +++.+.++    ..          ....|+++
T Consensus       158 --~~~~~~~~~~~~~~------~~~p----------~~~~~~~~~~~-~~~~~~i~----~~----------~~~~dll~  204 (396)
T 1n40_A          158 --PKLFRSLSIAFMSS------ADPI----------PAAKINWDRDI-EYMAGILE----NP----------NITTGLMG  204 (396)
T ss_dssp             --HHHHHTHHHHTBCC------SSCC----------HHHHHHHHHHH-HHHHHHHH----CT----------TCCSHHHH
T ss_pred             --HHHHHHHHHHhccc------cCCC----------HHHHHHHHHHH-HHHHHHHh----CC----------CCCCCHHH
Confidence              34444443332110      0011          12334444455 56665554    00          23479999


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCcc
Q 048742          281 FLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHF  360 (472)
Q Consensus       281 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~  360 (472)
                      .|+++.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |
T Consensus       205 ~ll~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~  265 (396)
T 1n40_A          205 ELSRLRKDP-AYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------L  265 (396)
T ss_dssp             HHHHHHTSG-GGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------G
T ss_pred             HHHHhhccc-ccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------------H
Confidence            999875210 144689999999999999999999999999999999999999999999963                  8


Q ss_pred             HHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          361 LQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       361 l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      |+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||.+           ..
T Consensus       266 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----------~~  334 (396)
T 1n40_A          266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-----------TS  334 (396)
T ss_dssp             HHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-----------TC
T ss_pred             HHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-----------CC
Confidence            9999999999999999656899999999999999999999999999999999999999999999973           25


Q ss_pred             eeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||+|+|.|+|++||++|++++++.|+++|
T Consensus       335 ~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f  366 (396)
T 1n40_A          335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKM  366 (396)
T ss_dssp             SSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999987


No 65 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=3.1e-57  Score=422.75  Aligned_cols=340  Identities=16%  Similarity=0.231  Sum_probs=281.2

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCC----ccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCCh
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGS----KICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGP  126 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~----~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (472)
                      .+..+++.++.++ ++||+|+++++++    .++++|+||+.+++++++. ..|+.++......... ...+.++..+|+
T Consensus         9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~~~~~~~g~   85 (384)
T 3oo3_A            9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRA-LLPGILQAYDPP   85 (384)
T ss_dssp             EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----C-CCTTCGGGCCTT
T ss_pred             ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCcccccccccc-ccccccccCCCh
Confidence            3467899999999 5999999999886    8999999999999999554 5677665443222111 223455677899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEF  205 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  205 (472)
                      .|+++|+.+.+ .|+..+++.+ +.+.+.++++++.+.. .++++|+.+.+...+.+.+...+||.+.+..      .++
T Consensus        86 ~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~------~~~  157 (384)
T 3oo3_A           86 DHTRLRRTVAP-AYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ------AEL  157 (384)
T ss_dssp             HHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH------HHH
T ss_pred             hHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH------HHH
Confidence            99999999987 9999999999 9999999999999965 3678999999998888888888999876432      445


Q ss_pred             HHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHH
Q 048742          206 RQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLEL  285 (472)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~  285 (472)
                      .+.+..+..   .                ...+...+..+.+.+++.+.++++++            ....|+++.+++.
T Consensus       158 ~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~~i~~~~~------------~~~~d~l~~ll~~  206 (384)
T 3oo3_A          158 SRMIRESRE---S----------------RLPRQRTLSGLGIVNYTKRLTSGKRR------------DPGDGMIGVIVRE  206 (384)
T ss_dssp             HHHHHHHHH---C----------------SCHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHHH
T ss_pred             HHHHHHHhc---c----------------CChHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHHh
Confidence            555544432   0                01234555667788888888877654            3457999999986


Q ss_pred             hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHH
Q 048742          286 KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVV  365 (472)
Q Consensus       286 ~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  365 (472)
                      .     +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.                  |+|||
T Consensus       207 ~-----~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i  263 (384)
T 3oo3_A          207 H-----GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSAT  263 (384)
T ss_dssp             H-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHH
T ss_pred             c-----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHH
Confidence            2     346999999999999999999999999999999999999999999999874                  89999


Q ss_pred             HhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecC
Q 048742          366 KETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFG  445 (472)
Q Consensus       366 ~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg  445 (472)
                      +|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||     +||++|||+||.            ..|+|||
T Consensus       264 ~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~------------~~~~~FG  326 (384)
T 3oo3_A          264 EEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK------------ATHMAFG  326 (384)
T ss_dssp             HHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC------------CCCCTTC
T ss_pred             HHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC------------CCcCCCC
Confidence            99999999998766899999999999999999999999999999     999999999953            2589999


Q ss_pred             CCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          446 SGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       446 ~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+|.|+|++||++|++++++.|+++|
T Consensus       327 ~G~r~C~G~~lA~~e~~~~l~~ll~~f  353 (384)
T 3oo3_A          327 HGIHHCIGAPLARLQLRVALPAVVGRF  353 (384)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999987


No 66 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.9e-58  Score=433.03  Aligned_cols=343  Identities=18%  Similarity=0.212  Sum_probs=276.0

Q ss_pred             CCChhHHHHHHHHhhCCeEEEecCC--ccEEEEcCHHHHHHHHHhccccccCCCCcchhhhh-c-cCC-cceEeCCCChh
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKLGS--KICIHISSPSLAKQILKDQDAIFANRDPPASALVT-S-YGL-HDIVWMPNGPE  127 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~  127 (472)
                      ..+|+..+.++++ ||+|+++...|  .++++|++++.+++++++. +.|+.++........ . .+. ...++..+|+.
T Consensus        36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence            4589999999987 99999996444  7899999999999999665 356655432221100 0 001 23456778999


Q ss_pred             HHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHHH
Q 048742          128 WRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVEF  205 (472)
Q Consensus       128 ~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  205 (472)
                      |+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+.+.+ ..+++++|+. +||.+.+.     . ..+
T Consensus       114 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----~-~~~  183 (415)
T 3mgx_A          114 HRKLRKLVGP-LLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPAED-----E-DML  183 (415)
T ss_dssp             HHHHHHHHGG-GSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCGGG-----H-HHH
T ss_pred             HHHHHHHhHh-hhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCHHH-----H-HHH
Confidence            9999999988 9999999999 9999999999988865  4579998887 5699999998 58865422     1 444


Q ss_pred             HHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHH
Q 048742          206 RQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLEL  285 (472)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~  285 (472)
                      .+..+.+....    .....|           ....+..+.+.+++.+.++++++            ....|+++.|+++
T Consensus       184 ~~~~~~~~~~~----~~~~~~-----------~~~~~~~~~l~~~~~~~i~~rr~------------~~~~dll~~ll~~  236 (415)
T 3mgx_A          184 IDLTNHAFGGE----DELFDG-----------MTPRQAHTEILVYFDELITARRK------------EPGDDLVSTLVTD  236 (415)
T ss_dssp             HHHHHHHTSCC----C----C-----------CCHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHHC
T ss_pred             HHHHHHHHccc----Ccccch-----------HHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHhC
Confidence            44444332111    011111           11124556777888888887765            3457999999875


Q ss_pred             hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHH
Q 048742          286 KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVV  365 (472)
Q Consensus       286 ~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  365 (472)
                      .       .++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  |||+|||
T Consensus       237 ~-------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i  291 (415)
T 3mgx_A          237 D-------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVV  291 (415)
T ss_dssp             T-------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHH
T ss_pred             C-------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHH
Confidence            3       58999999999999999999999999999999999999999999996                  6999999


Q ss_pred             HhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecC
Q 048742          366 KETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFG  445 (472)
Q Consensus       366 ~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg  445 (472)
                      +|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .++|||
T Consensus       292 ~E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~~------------~~l~FG  358 (415)
T 3mgx_A          292 EEVLRWTSPAMHV-LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPN------------RHITFG  358 (415)
T ss_dssp             HHHHHHHCCBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCSC------------CCCTTC
T ss_pred             HHHHHhcCccccc-ceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCCC------------CCCCCC
Confidence            9999999999964 799999999999999999999999999999999999999999999742            489999


Q ss_pred             CCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          446 SGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       446 ~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+|.|+|++||.+|++++++.||++|
T Consensus       359 ~G~r~C~G~~lA~~e~~~~l~~ll~~f  385 (415)
T 3mgx_A          359 HGMHHCLGSALARIELSVVLRVLAERV  385 (415)
T ss_dssp             CGGGCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999986


No 67 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.4e-57  Score=429.97  Aligned_cols=353  Identities=20%  Similarity=0.303  Sum_probs=280.1

Q ss_pred             cCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhc-------cCCcceEeCC
Q 048742           51 SIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTS-------YGLHDIVWMP  123 (472)
Q Consensus        51 ~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  123 (472)
                      .+..+++.++.++ ++||+|++++.+   +++|+||+.+++++++.. .++.++.........       ......++..
T Consensus        26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  100 (418)
T 3r9b_A           26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFL  100 (418)
T ss_dssp             GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred             hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhc
Confidence            4578899999998 578999998765   899999999999997753 334333221111110       0112345567


Q ss_pred             CChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccch
Q 048742          124 NGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSV  201 (472)
Q Consensus       124 ~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  201 (472)
                      +|+.|+++|+++.+ .|++..++.+ +.+.+.++++++ +..  ++.+|+...+ ..+++++++. +||.+.+..     
T Consensus       101 dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----  170 (418)
T 3r9b_A          101 DPPDHTRLRGLVSK-AFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIEDE-----  170 (418)
T ss_dssp             CTTHHHHHHHHHHG-GGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----
T ss_pred             CCchHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHHHH-----
Confidence            89999999999997 9999999999 999999999999 753  4689986655 5899999999 899876432     


Q ss_pred             hHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHH
Q 048742          202 GVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHF  281 (472)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~  281 (472)
                       ..+......+......      .+.+.++.. ...+...+..+.+.+++.+.++++++            ....|+++.
T Consensus       171 -~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~r~~------------~~~~d~l~~  230 (418)
T 3r9b_A          171 -PKFSRASALLAAALDP------FLALTGETS-DLFDEQMKAGMWLRDYLRALIDERRR------------TPGEDLMSG  230 (418)
T ss_dssp             -HHHHHHHHHHHHTTSC------HHHHHSSCC-TTHHHHHHHHHHHHHHHHHHHHHTTT------------SCCSSHHHH
T ss_pred             -HHHHHHHHHHHhhcCc------cccccccCH-HHHHHHHHHHHHHHHHHHHHHHHHHh------------CCCccHHHH
Confidence             3444444443322211      111111111 22345666777788888888876654            345799999


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccH
Q 048742          282 LLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFL  361 (472)
Q Consensus       282 ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l  361 (472)
                      |++....   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |+
T Consensus       231 ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l  289 (418)
T 3r9b_A          231 LVAVEES---GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RA  289 (418)
T ss_dssp             HHHHHHH---SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GH
T ss_pred             HHHhhhc---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hH
Confidence            9987554   45699999999999999999999999999999999999999999999975                  89


Q ss_pred             HHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccce
Q 048742          362 QSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRY  441 (472)
Q Consensus       362 ~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~  441 (472)
                      +|||+|+||++|+++.. +|++.+|++++||.||||+.|.++.+++||||++|+||++|||+|+            ...+
T Consensus       290 ~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~------------~~~~  356 (418)
T 3r9b_A          290 SAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA------------QIRH  356 (418)
T ss_dssp             HHHHHHHHHHSCSBCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------------CCCC
T ss_pred             HHHHHHHHHhCCccccc-eeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC------------CCCC
Confidence            99999999999999986 5999999999999999999999999999999999999999999992            2358


Q ss_pred             eecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          442 LPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       442 ~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|||+|+|.|+|++||++|++++++.|+++|
T Consensus       357 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  387 (418)
T 3r9b_A          357 LGFGKGAHFCLGAPLARLEATVALPALAARF  387 (418)
T ss_dssp             CTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCcCccCccHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999987


No 68 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=4.1e-58  Score=430.04  Aligned_cols=335  Identities=19%  Similarity=0.235  Sum_probs=267.3

Q ss_pred             HHHHHHhhCCeEEEecC-Cc---cEEEEcCHHHHHHHH-HhccccccCCCC------cchh--hhhccCCcceEeCCCCh
Q 048742           60 CAKLSRVYGPIFKLKLG-SK---ICIHISSPSLAKQIL-KDQDAIFANRDP------PASA--LVTSYGLHDIVWMPNGP  126 (472)
Q Consensus        60 ~~~~~~~yg~v~~~~~~-~~---~~v~v~dp~~v~~i~-~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~  126 (472)
                      +.+++++ |+|++++++ |.   ++++|+||+.+++++ ++.  .|+.++.      ....  ........ .++..+|+
T Consensus        19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~   94 (398)
T 1lfk_A           19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ--QFSTRRRWDPRDEIGGKGIFRPRELVG-NLMDYDPP   94 (398)
T ss_dssp             CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT--TEEECTTCCC-------------CCTT-CGGGCCTT
T ss_pred             hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc--ccccccccccccccCCccccccccccc-CccccCCH
Confidence            3447776 999999875 55   799999999999999 543  3554432      0100  11111122 34456899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHH-HHHHHHHHHHhcCCCCCCcccchhHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFL-AILNVVMNMLWGSSLHGEERSSVGVE  204 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~  204 (472)
                      .|+++|+.+.+ .|+...++.+ +.+.+.++++++.+... ++++|+.+.+.. ++.++++. +||.+.+..      ..
T Consensus        95 ~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~------~~  165 (398)
T 1lfk_A           95 EHTRLRRKLTP-GFTLRKMQRMAPYIEQIVNDRLDEMERA-GSPADLIAFVADKVPGAVLCE-LVGVPRDDR------DM  165 (398)
T ss_dssp             HHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHH-CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH------HH
T ss_pred             HHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHH-HcCCCHHHH------HH
Confidence            99999999998 8999999999 99999999999999753 678999999887 88899987 689876421      33


Q ss_pred             HHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHH
Q 048742          205 FRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLE  284 (472)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  284 (472)
                      +.+....+.    .     . +        ...+...+..+.+.+++.+.++++++            ....|+++.|++
T Consensus       166 ~~~~~~~~~----~-----~-~--------~~~~~~~~~~~~~~~~~~~~i~~r~~------------~~~~dll~~ll~  215 (398)
T 1lfk_A          166 FMKLCHGHL----D-----A-S--------LSQKRRAALGDKFSRYLLAMIARERK------------EPGEGMIGAVVA  215 (398)
T ss_dssp             HHHHHHHTT----C-----T-T--------SCHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHH
T ss_pred             HHHHHHHHH----h-----c-c--------cchHHHHHHHHHHHHHHHHHHHHHHh------------CCCCCHHHHHHH
Confidence            433333221    0     0 0        01234556667788888888887765            234699999998


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHH
Q 048742          285 LKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSV  364 (472)
Q Consensus       285 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  364 (472)
                      +.     +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  ||+||
T Consensus       216 ~~-----~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~  272 (398)
T 1lfk_A          216 EY-----GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRA  272 (398)
T ss_dssp             HH-----GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHH
T ss_pred             hc-----CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHH
Confidence            75     12589999999999999999999999999999999999999999999975                  79999


Q ss_pred             HHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          365 VKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       365 i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      |+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||..            .++||
T Consensus       273 i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~~l~F  340 (398)
T 1lfk_A          273 VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREPI------------PHVAF  340 (398)
T ss_dssp             HHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCCC------------CCCTT
T ss_pred             HHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCCC------------CCCCC
Confidence            999999999999656899999999999999999999999999999999999999999999842            48999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||++|++++++.||++|
T Consensus       341 G~G~r~C~G~~lA~~e~~~~l~~ll~~f  368 (398)
T 1lfk_A          341 GHGVHHCLGAALARLELRTVFTELWRRF  368 (398)
T ss_dssp             CCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1.9e-56  Score=421.31  Aligned_cols=349  Identities=17%  Similarity=0.237  Sum_probs=275.9

Q ss_pred             CCChhHHHHHHHHhhCCeEEEec-CCccEEEEcCHHHHHHHHHhccccccCCCC---cchh------hhhccCCcceEeC
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKL-GSKICIHISSPSLAKQILKDQDAIFANRDP---PASA------LVTSYGLHDIVWM  122 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~  122 (472)
                      ..+|+.++.+++++ |+|+++.. ++.++++|++++.+++++++.. .|+....   ....      .....+ ...++.
T Consensus        37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~  113 (426)
T 3rwl_A           37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLD-LPNFIA  113 (426)
T ss_dssp             TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CC-CCCGGG
T ss_pred             cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccc-cCcccc
Confidence            35689999999876 99999987 4567999999999999998863 3444321   1000      111112 234557


Q ss_pred             CCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccc
Q 048742          123 PNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSS  200 (472)
Q Consensus       123 ~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  200 (472)
                      .+|+.|+++|+++.+ .|++..++.+ +.+.+.++++++.+..  ++++|+...+ ..++.++++. +||.+....    
T Consensus       114 ~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~----  185 (426)
T 3rwl_A          114 MDRPRHDEQRKAVSP-IVAPANLAALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFPFEER----  185 (426)
T ss_dssp             CCTTHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT----
T ss_pred             cCchHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCCHHHH----
Confidence            789999999999998 9999999999 9999999999988843  6789988777 5677787776 899764322    


Q ss_pred             hhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHH
Q 048742          201 VGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLH  280 (472)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  280 (472)
                        ..+....+.    ......    +..     ....+...+..+.+.+++.+.++++++.           ....|+++
T Consensus       186 --~~~~~~~~~----~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~~dll~  239 (426)
T 3rwl_A          186 --RKLTRWSDV----TTAAPG----GGV-----VESWDQRKTELLECAAYFQVLWNERVNK-----------DPGNDLIS  239 (426)
T ss_dssp             --HHHHHHHHH----HTCCTT----SSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHTS-----------CCCSSHHH
T ss_pred             --HHHHHHHHH----HHhccC----ccc-----cccHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCCCCHHH
Confidence              333332222    111100    100     0112344455677888888888776321           35679999


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCcc
Q 048742          281 FLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHF  360 (472)
Q Consensus       281 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~  360 (472)
                      .|++....    ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+                  +|
T Consensus       240 ~ll~~~~~----~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~  297 (426)
T 3rwl_A          240 MLAHSPAT----RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------AL  297 (426)
T ss_dssp             HHHHCGGG----GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GG
T ss_pred             HHHhcccC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------Hh
Confidence            99987543    348999999999999999999999999999999999999999999995                  39


Q ss_pred             HHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccc
Q 048742          361 LQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFR  440 (472)
Q Consensus       361 l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~  440 (472)
                      +++||+|+||++|+++. ++|++.+|++++|+.||||+.|.++.+++||||++|+||++|||+||..           ..
T Consensus       298 l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~-----------~~  365 (426)
T 3rwl_A          298 VETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP-----------RQ  365 (426)
T ss_dssp             HHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-----------TC
T ss_pred             HHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-----------CC
Confidence            99999999999999998 4799999999999999999999999999999999999999999999953           25


Q ss_pred             eeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          441 YLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       441 ~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      ++|||+|+|.|+|++||.+|++++++.|+++|
T Consensus       366 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  397 (426)
T 3rwl_A          366 HLSFGFGIHRCVGNRLAEMQLRILWEEILTRF  397 (426)
T ss_dssp             CSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCCCcCCccHHHHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999987


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=9.8e-56  Score=412.78  Aligned_cols=346  Identities=17%  Similarity=0.210  Sum_probs=273.5

Q ss_pred             CChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHHH
Q 048742           54 PDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRK  133 (472)
Q Consensus        54 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  133 (472)
                      .+|+.++.++++ +|+|+++..+   .++|++++.++++++++  .|+.++..... .......+.++..+|+.|+++|+
T Consensus        20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~-~~~~~~~~~l~~~dg~~h~~~R~   92 (394)
T 2wiy_A           20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADA-GPWAVASDTALGSDPPHHTVLRR   92 (394)
T ss_dssp             HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTC-GGGGGGGGSGGGCCTTHHHHHHH
T ss_pred             cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Ccccccccccc-ccchhcccccccCCchHHHHHHH
Confidence            478888888866 4899987643   58999999999999764  34332111000 01111123355779999999999


Q ss_pred             HHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHH
Q 048742          134 VFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEI  212 (472)
Q Consensus       134 ~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  212 (472)
                      ++.+ .|++..++.+ +.+.+.++++++.+..  ++.+|+...+..+++++++..+||.+.+..      ..+.+.....
T Consensus        93 ~~~~-~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~------~~~~~~~~~~  163 (394)
T 2wiy_A           93 QTNK-WFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDDA------DAVMEAMFEA  163 (394)
T ss_dssp             HHHT-TCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCCH------HHHHHHHHHH
T ss_pred             HHHh-ccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhHH------HHHHHHHHHH
Confidence            9887 9999999999 9999999999888754  678999999999999999999999875321      3444333222


Q ss_pred             HHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCC
Q 048742          213 VEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDK  292 (472)
Q Consensus       213 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  292 (472)
                      ....      ...|..      ...++..+..+.+.+++.+.++++++            ....|+++.|++...+    
T Consensus       164 ~~~~------~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~------------~~~~dll~~Ll~~~~~----  215 (394)
T 2wiy_A          164 MLMQ------SAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRV------------NPGDGLADSLLDAARA----  215 (394)
T ss_dssp             HGGG------SSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHHHHHT----
T ss_pred             HHhc------cCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhc------------CCCCcHHHHHHHhhhc----
Confidence            1100      011211      11123344556677778888777654            2346899999987653    


Q ss_pred             CCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCC
Q 048742          293 TSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLH  372 (472)
Q Consensus       293 ~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  372 (472)
                      ..++++|+.+++..+++||+|||+++++|++++|++||++|+++++|++                  |+++||+|+||++
T Consensus       216 ~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~LRl~  277 (394)
T 2wiy_A          216 GEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES------------------ARAAIINEMVRMD  277 (394)
T ss_dssp             TSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH------------------hHHHHHHHHHhhC
Confidence            2499999999999999999999999999999999999999999999863                  7999999999999


Q ss_pred             CCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCccccc
Q 048742          373 PPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICA  452 (472)
Q Consensus       373 ~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~  452 (472)
                      |+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||++.          ..++|||+|+|.|+
T Consensus       278 pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----------~~~l~FG~G~r~C~  346 (394)
T 2wiy_A          278 PPQLSF-LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----------SRNLSFGLGPHSCA  346 (394)
T ss_dssp             CSBCEE-EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----------SCCSTTCCGGGSCT
T ss_pred             CCccCe-eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----------CCccCCCCCCCcCC
Confidence            999864 7999999999999999999999999999999999999999999999852          25899999999999


Q ss_pred             ChHHHHHHHHHHHHHHhhcC
Q 048742          453 GISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       453 G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |++||++|++++++.|+++|
T Consensus       347 G~~lA~~e~~~~l~~ll~~~  366 (394)
T 2wiy_A          347 GQIISRAEATTVFAVLAERY  366 (394)
T ss_dssp             THHHHHHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999987


No 71 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=8e-56  Score=409.32  Aligned_cols=328  Identities=19%  Similarity=0.239  Sum_probs=262.1

Q ss_pred             hhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch-hh-----h-hccCC--cceEeCCCCh
Q 048742           56 FHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS-AL-----V-TSYGL--HDIVWMPNGP  126 (472)
Q Consensus        56 ~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~-~~-----~-~~~~~--~~~~~~~~~~  126 (472)
                      |+..+.++ ++||+|++++  |  .++|+||+.+++++.+. +.|+.++.... ..     . ...+.  ...++..+|+
T Consensus         1 p~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~   74 (367)
T 3b4x_A            1 MYDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP   74 (367)
T ss_dssp             CHHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred             CCHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence            34567777 4799999987  3  79999999999999876 35665532111 11     1 11221  1334466899


Q ss_pred             hHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDCALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVEF  205 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  205 (472)
                      .|+++|+.+.+ .|++..++. +.+.+.++++++.+.    +.+|+.+.+ ..+++++|+. +||.+ +.  .    .++
T Consensus        75 ~h~~~R~~~~~-~fs~~~l~~-~~i~~~~~~l~~~l~----g~~d~~~~~~~~~~~~vi~~-~~G~~-~~--~----~~~  140 (367)
T 3b4x_A           75 LHDELRNLTAD-AFNPSNLPV-DFVREVTVKLLSELD----EEFDVIESFAIPLPILVISK-MLGIN-PD--V----KKV  140 (367)
T ss_dssp             HHHHHHHTTGG-GGSGGGSCH-HHHHHHHHHHHHTCC----SEEEHHHHTTTHHHHHHHHH-HHTCC-CC--H----HHH
T ss_pred             hHHHHHHHHHH-hcCHhhhcc-hHHHHHHHHHHHhcc----CCcchHHHHHHhhHHHHHHH-HcCCC-Cc--H----HHH
Confidence            99999999998 899999988 888888888888875    349999765 7899999999 79998 32  1    445


Q ss_pred             HHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHH
Q 048742          206 RQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLEL  285 (472)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~  285 (472)
                      ....+.+.....      ..|..        .+.. +..+.+.+++.+.++++++            ....|+++.|+++
T Consensus       141 ~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~------------~~~~dll~~ll~~  193 (367)
T 3b4x_A          141 KDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKG------------KEIVDLTGKIANS  193 (367)
T ss_dssp             HHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTT------------TCCSSHHHHHHTS
T ss_pred             HHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhc------------CCCCCHHHHHHhc
Confidence            555444432211      12211        1112 4556677788888877654            2346899999854


Q ss_pred             hhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHH
Q 048742          286 KQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVV  365 (472)
Q Consensus       286 ~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  365 (472)
                              .++++|+.+++..+++||+|||+++++|++++|++ |++|+++++|++                    +|||
T Consensus       194 --------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i  244 (367)
T 3b4x_A          194 --------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAV  244 (367)
T ss_dssp             --------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHH
T ss_pred             --------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHH
Confidence                    48999999999999999999999999999999999 999999999963                    7999


Q ss_pred             HhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecC
Q 048742          366 KETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFG  445 (472)
Q Consensus       366 ~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg  445 (472)
                      +|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||+||..            .++|||
T Consensus       245 ~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~------------~~l~FG  311 (367)
T 3b4x_A          245 EEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPN------------PHLSFG  311 (367)
T ss_dssp             HHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSSC------------CCCTTC
T ss_pred             HHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCCC------------CCcCCC
Confidence            99999999999 55799999999999999999999999999999999999999999999852            489999


Q ss_pred             CCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          446 SGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       446 ~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      +|+|.|+|++||++|++++++.|+++|
T Consensus       312 ~G~r~C~G~~lA~~e~~~~l~~ll~~f  338 (367)
T 3b4x_A          312 SGIHLCLGAPLARLEARIALEEFAKKF  338 (367)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             CCCccCccHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999986


No 72 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.3e-56  Score=420.11  Aligned_cols=347  Identities=18%  Similarity=0.211  Sum_probs=274.7

Q ss_pred             CCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch-hh-----hhccCCcceEeCCCCh
Q 048742           53 EPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS-AL-----VTSYGLHDIVWMPNGP  126 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~  126 (472)
                      ..+|+.+  ++.++||+|+++..++.. ++|++++.++++++++.  +........ ..     .......+.++..+|+
T Consensus        32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  106 (416)
T 3p3o_A           32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGA  106 (416)
T ss_dssp             TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHH
T ss_pred             ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCch
Confidence            4567777  445679999999887656 99999999999998864  222111000 00     0000012345677999


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVE  204 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  204 (472)
                      .|+++|+++++ .|++..++.+ +.+.+.++++++.+ .  ++.+|+...+ ..+++++|+. +||.+....      ..
T Consensus       107 ~h~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~------~~  175 (416)
T 3p3o_A          107 DHRRLRGLATH-PFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLEDY------DT  175 (416)
T ss_dssp             HHHHHHHTTCG-GGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH------HH
T ss_pred             HHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHHHH------HH
Confidence            99999999997 9999999999 99999999999999 4  4569976655 5689999998 589764321      33


Q ss_pred             HHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHH
Q 048742          205 FRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLE  284 (472)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  284 (472)
                      +......+...         +...   ......+...+..+.+.+++.+.++++++            ....|+++.|++
T Consensus       176 ~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~------------~~~~dll~~ll~  231 (416)
T 3p3o_A          176 VGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKV------------EPGDDLTSDIVR  231 (416)
T ss_dssp             HHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHH------------SCCSSHHHHHHH
T ss_pred             HHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHh------------CCCccHHHHHHH
Confidence            33322221111         1100   11122345666777888888888887765            346799999998


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHH
Q 048742          285 LKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSV  364 (472)
Q Consensus       285 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  364 (472)
                      +..+   + .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  |+++|
T Consensus       232 ~~~~---~-~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~  289 (416)
T 3p3o_A          232 AFHD---G-VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQA  289 (416)
T ss_dssp             HHHT---T-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHH
T ss_pred             hhcc---C-CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHH
Confidence            8764   2 799999999999999999999999999999999999999999999974                  89999


Q ss_pred             HHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          365 VKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       365 i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      |+|+||++|+++..++|++.+|++++|+.||||+.|.++.+++||||++|+||++|||+||.+           ..++||
T Consensus       290 i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~-----------~~~l~F  358 (416)
T 3p3o_A          290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE-----------APSIAF  358 (416)
T ss_dssp             HHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS-----------SCCCTT
T ss_pred             HHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC-----------CCeecC
Confidence            999999999997667899999999999999999999999999999999999999999999753           248999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||.+|++++++.|+++|
T Consensus       359 G~G~r~C~G~~lA~~e~~~~l~~ll~~f  386 (416)
T 3p3o_A          359 GGGPHFCLGTALARLELTEAVAALATRL  386 (416)
T ss_dssp             CCSTTSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987


No 73 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2e-55  Score=403.29  Aligned_cols=312  Identities=19%  Similarity=0.260  Sum_probs=245.7

Q ss_pred             HhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHHHHHHHHHhccccc
Q 048742           65 RVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLN  144 (472)
Q Consensus        65 ~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~  144 (472)
                      ++||||+++   |  .++|+||+.+++++.++ ..|+.++..... ..  +. ..++..+|+.|+++|+.+.+ .|++..
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~--~~-~~l~~~~g~~~~~~R~~~~~-~fs~~~   70 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA--GG-ISFITMDNPEHKEFRDISAP-YFLPSK   70 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------C-CGGGGCCHHHHHHHHHHHHH-HHSHHH
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc--cc-cccccCCchHHHHHHHHhhh-hcCHHH
Confidence            589999986   3  89999999999999886 356665421111 11  22 33446689999999999988 899999


Q ss_pred             cchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCccc
Q 048742          145 LDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNIS  222 (472)
Q Consensus       145 l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (472)
                      ++.+ +.+.+.++++++.+.     .+|+.+.+ ..+++++++.+ ||.+.+..      .++.+....+...   .   
T Consensus        71 l~~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------~~~~~~~~~~~~~---~---  132 (343)
T 2rfb_A           71 INDYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSDM------PLFKLWSDYIIGN---K---  132 (343)
T ss_dssp             HGGGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGGH------HHHHHHHHHHHTS---C---
T ss_pred             HHHHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHHH------HHHHHHHHHHhhc---c---
Confidence            9999 999999999888875     68998865 79999999998 99876421      3444444433221   0   


Q ss_pred             chhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHH
Q 048742          223 DLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKG  302 (472)
Q Consensus       223 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~  302 (472)
                        .|.+.     . .++. +..+.+.+++.+.+                   ..| ++.|+++..+   +..++++++.+
T Consensus       133 --~p~~~-----~-~~~~-~~~~~~~~~~~~~i-------------------~~d-l~~ll~~~~~---~~~l~~~ei~~  180 (343)
T 2rfb_A          133 --RDENF-----N-YVNN-RMVSRLLEIFKSDS-------------------HGI-INVLAGSSLK---NRKLTMDEKIK  180 (343)
T ss_dssp             --CSSHH-----H-HHHH-HHHHHHHHHHHSCC-------------------SSH-HHHHHTCBCS---SSBCCHHHHHH
T ss_pred             --Ccchh-----h-HHHH-HHHHHHHHHHHHHH-------------------hcc-HHHHHhhhcC---CCCCCHHHHHH
Confidence              12210     0 1112 22223332222211                   356 8888865332   45699999999


Q ss_pred             HHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcCCCCC-CCCCCc
Q 048742          303 LLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPL-PLLVPH  381 (472)
Q Consensus       303 ~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~-~~~~~r  381 (472)
                      ++..+++||+|||+++++|++++|++||++|+++++|+                     +|||+|+||++|++ + .++|
T Consensus       181 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R  238 (343)
T 2rfb_A          181 YIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHR  238 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCC
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccce
Confidence            99999999999999999999999999999999999995                     79999999999999 8 4589


Q ss_pred             cccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCcccccChHHHHHHH
Q 048742          382 CPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMV  461 (472)
Q Consensus       382 ~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~  461 (472)
                      .+.+|++++||.||||+.|.++.+++||||++|+||++|+||||             ..++|||.|+|.|+|++||++|+
T Consensus       239 ~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-------------~~~~~FG~G~r~C~G~~lA~~e~  305 (343)
T 2rfb_A          239 FAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-------------EMHLAFGIGIHMCLGAPLARLEA  305 (343)
T ss_dssp             EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-------------SCCCTTCCSTTSCTTHHHHHHHH
T ss_pred             EECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-------------CCCccCCCCCccCCChHHHHHHH
Confidence            99999999999999999999999999999999999999999994             14899999999999999999999


Q ss_pred             HHHHHHHhhcC
Q 048742          462 AYVLATLLHSF  472 (472)
Q Consensus       462 ~~~l~~ll~~f  472 (472)
                      +++++.|+++|
T Consensus       306 ~~~la~ll~~f  316 (343)
T 2rfb_A          306 SIALNDILNHF  316 (343)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999999987


No 74 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1e-54  Score=402.64  Aligned_cols=327  Identities=17%  Similarity=0.277  Sum_probs=256.6

Q ss_pred             hhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCC--c--chhhh-hc--cC--CcceEeCCCCh
Q 048742           56 FHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDP--P--ASALV-TS--YG--LHDIVWMPNGP  126 (472)
Q Consensus        56 ~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~--~--~~~~~-~~--~~--~~~~~~~~~~~  126 (472)
                      |+..+.++ ++||+|+++  +  +.++|+||+.+++++.+. ..|+.++.  .  ..... ..  .+  ....++..+|+
T Consensus         1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~   74 (368)
T 1io7_A            1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP   74 (368)
T ss_dssp             CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred             CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCCh
Confidence            35667777 589999987  3  579999999999999975 35666653  1  11000 01  11  11334567899


Q ss_pred             hHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHHHHHHHhcCCCCCCcccchhHH
Q 048742          127 EWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQM-FLAILNVVMNMLWGSSLHGEERSSVGVE  204 (472)
Q Consensus       127 ~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  204 (472)
                      .|+++|+.+.+ .|++..++.+ +.+.+.++++++.+ .  .+.+|+.+.+ ..+++++|+.+ ||.+.+..      ..
T Consensus        75 ~h~~~R~~~~~-~f~~~~~~~~~~~i~~~~~~l~~~l-~--~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------~~  143 (368)
T 1io7_A           75 LHDELRSMSAD-IFSPQKLQTLETFIRETTRSLLDSI-D--PREDDIVKKLAVPLPIIVISKI-LGLPIEDK------EK  143 (368)
T ss_dssp             HHHHHHGGGTT-TTCHHHHHHHHHHHHHHHHHHHHTC-C--TTSEEHHHHTTTHHHHHHHHHH-HTCCGGGH------HH
T ss_pred             HHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHh-h--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH------HH
Confidence            99999999998 8999999999 99999999999998 4  3479999876 68999999999 99876321      23


Q ss_pred             HHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHH
Q 048742          205 FRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLE  284 (472)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  284 (472)
                      +.+....+    ..  ... .|.        ..+...+..+.+.+++.+.+                 ....|+++.|++
T Consensus       144 ~~~~~~~~----~~--~~~-~p~--------~~~~~~~~~~~~~~~~~~~i-----------------~~~~d~l~~ll~  191 (368)
T 1io7_A          144 FKEWSDLV----AF--RLG-KPG--------EIFELGKKYLELIGYVKDHL-----------------NSGTEVVSRVVN  191 (368)
T ss_dssp             HHHHGGGC----TT--SCC-CTT--------CHHHHHHHHHHHHHHHHHHT-----------------TSSCHHHHHHHT
T ss_pred             HHHHHHHH----Hh--ccC-ChH--------HHHHHHHHHHHHHHHHHHHh-----------------CCCCCHHHHHHh
Confidence            33221111    10  000 121        01233344444555554444                 123689999885


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHH
Q 048742          285 LKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSV  364 (472)
Q Consensus       285 ~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  364 (472)
                      .        .++++++.+++..+++||+|||+++++|++++|++|| +|+++++| +                  |++||
T Consensus       192 ~--------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~  243 (368)
T 1io7_A          192 S--------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKA  243 (368)
T ss_dssp             S--------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHH
T ss_pred             c--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHH
Confidence            3        4899999999999999999999999999999999999 99999999 2                  79999


Q ss_pred             HHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeec
Q 048742          365 VKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPF  444 (472)
Q Consensus       365 i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~F  444 (472)
                      |+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||||+-            ..++||
T Consensus       244 i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~~~F  310 (368)
T 1io7_A          244 IEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP------------NPHLSF  310 (368)
T ss_dssp             HHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCS------------CCCCTT
T ss_pred             HHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCCC------------CCCcCC
Confidence            999999999999 4589999999999999999999999999999999999999999999931            248999


Q ss_pred             CCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          445 GSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       445 g~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+|+|.|+|++||++|++++++.|+++|
T Consensus       311 G~G~r~C~G~~lA~~e~~~~l~~ll~~f  338 (368)
T 1io7_A          311 GSGIHLCLGAPLARLEARIAIEEFSKRF  338 (368)
T ss_dssp             CCGGGSCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=2.2e-53  Score=398.68  Aligned_cols=357  Identities=17%  Similarity=0.244  Sum_probs=261.0

Q ss_pred             CCCccccc---cccCCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcch---hhhhcc
Q 048742           41 LGLPVLGN---LLSIEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPAS---ALVTSY  114 (472)
Q Consensus        41 ~~~p~~G~---~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~---~~~~~~  114 (472)
                      .++|.+|.   ..++..||+.++.++++ +|||+++  .+..+++|++++.++++++++. .|+.......   ......
T Consensus        18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~   93 (412)
T 4dnj_A           18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPW   93 (412)
T ss_dssp             TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCS
T ss_pred             CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccc
Confidence            45777762   23456789999988865 7999865  5667899999999999998764 3332221111   111112


Q ss_pred             CCcceEeCCCChhHHHHHHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccch-HHHHHHHHHHHHHHHHhcCC
Q 048742          115 GLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINL-GEQMFLAILNVVMNMLWGSS  192 (472)
Q Consensus       115 ~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~-~~~~~~~~~~~i~~~~fG~~  192 (472)
                      ...+.++..||++|+++|+++++ .|++..++.+ +.+.+.++++++.+... ++.+|+ .++...+..++++.++ |.+
T Consensus        94 ~~~~~~~~~Dg~~H~r~R~~~~~-~Fs~~~l~~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l~-g~~  170 (412)
T 4dnj_A           94 RPPSLILEADPPAHTRTRAVLSK-VLSPATMKRLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDAM-GLK  170 (412)
T ss_dssp             SCCCTTTTCCTTHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHHH-TCC
T ss_pred             cCCCccccCChHHHHHHHhhccc-ccCHHHHHHhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHHc-CCc
Confidence            22345567899999999999998 9999999999 99999999999998764 456665 3445556777777654 554


Q ss_pred             CCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccc
Q 048742          193 LHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQN  272 (472)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  272 (472)
                      ....      ..+......+........              ........    ....+...+.++.+..          
T Consensus       171 ~~~~------~~~~~~~~~~~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~----------  216 (412)
T 4dnj_A          171 QEGR------ENLLPYAGLVFNAFGPPN--------------ELRQSAIE----RSAPHQAYVAEQCQRP----------  216 (412)
T ss_dssp             STTG------GGHHHHHHHHHHHTSCSS--------------HHHHHHHH----TCHHHHHHHHHHTSGG----------
T ss_pred             hhhh------hhhhhhhhcccccccccH--------------HHHHHHHH----HHHHHHHHHHHHHHhh----------
Confidence            3322      222222222222211100              00111111    1111222222222211          


Q ss_pred             cccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceec
Q 048742          273 EENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEE  352 (472)
Q Consensus       273 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  352 (472)
                      ....|.++.++....+   +..++++|+.+++..+++||+|||+++++|++++|++||++|+||++|.            
T Consensus       217 ~~~~~~~~~l~~~~~~---~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~------------  281 (412)
T 4dnj_A          217 NLAPGGFGACIHAFSD---TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP------------  281 (412)
T ss_dssp             GSCTTSHHHHHHHTTT---TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------
T ss_pred             ccccccchhhhHhhhh---ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc------------
Confidence            2233445555554443   5679999999999999999999999999999999999999999999864            


Q ss_pred             ccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCc
Q 048742          353 SHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKL  432 (472)
Q Consensus       353 ~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~  432 (472)
                            .++.++++|++|++|+++.. +|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||..     
T Consensus       282 ------~~~~~~~eE~lR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~-----  349 (412)
T 4dnj_A          282 ------SLARNAFEEAVRFESPVQTF-FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS-----  349 (412)
T ss_dssp             ------GGHHHHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT-----
T ss_pred             ------cccccccceeeeecCCcccc-cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC-----
Confidence                  37899999999999999976 699999999999999999999999999999999999999999999753     


Q ss_pred             cccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          433 EYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       433 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                             .|+|||+|+|.|+|++||++|++++++.||++|
T Consensus       350 -------~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf  382 (412)
T 4dnj_A          350 -------GHVGFGSGVHMCVGQLVARLEGEVVLAALARKV  382 (412)
T ss_dssp             -------TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             -------CCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHC
Confidence                   489999999999999999999999999999986


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=7.2e-49  Score=367.05  Aligned_cols=347  Identities=15%  Similarity=0.169  Sum_probs=259.3

Q ss_pred             CCChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcchhhhhccCCcceEeCCCChhHHHH
Q 048742           53 EPDFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPASALVTSYGLHDIVWMPNGPEWRQL  131 (472)
Q Consensus        53 ~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (472)
                      ..+++..+.+++++.+ +++....+| ..++|++++.|++|++++. .|+....... ..........+...|+++|+++
T Consensus        36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~-~~~~~~~~~~~~~~D~p~H~r~  112 (417)
T 4dxy_A           36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPT-RFSSEVIFLP-KEAGEKAQMVPTKMDPPEHTPY  112 (417)
T ss_dssp             GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTT-TEESSCCSSS-TTSSCSSCTTTTTCCTTTHHHH
T ss_pred             hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCch-hccCCCcccc-cccccccccCcccCCcHHHHHH
Confidence            4568888888877654 566665554 5789999999999998753 4554332211 1111122334456789999999


Q ss_pred             HHHHHHHhccccccchh-HHHHHHHHHHHHHHHHhcCCccchHHHHHH-HHHHHHHHHHhcCCCCCCcccchhHHHHHHH
Q 048742          132 RKVFVREMMSSLNLDDC-ALRRAEVREMVKEVYKKVGSPINLGEQMFL-AILNVVMNMLWGSSLHGEERSSVGVEFRQVV  209 (472)
Q Consensus       132 R~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  209 (472)
                      |+++++ .|++..++.+ +.+++.++++++.+..  ++.+|+...+.. +...+++ .++|.+....      ..+.+..
T Consensus       113 Rrll~~-~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~-~llg~~~~d~------~~~~~~~  182 (417)
T 4dxy_A          113 RKALDK-GLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFM-ALADLPLEDI------PVLSEYA  182 (417)
T ss_dssp             HHHHHH-HHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHH-HHTTCCGGGH------HHHHHHH
T ss_pred             HHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHH-HHcCCCHHHH------HHHHhhh
Confidence            999998 9999999999 9999999999999976  567887666554 4445554 4567654321      3343333


Q ss_pred             HHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcccccccccHHHHHHHHhhcC
Q 048742          210 GEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKIDAAKGQISKQNEENKDFLHFLLELKQQG  289 (472)
Q Consensus       210 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  289 (472)
                      ..+.....      ..|       ...........+.+..++.+.+++|++            ....|+++.|+.+..+ 
T Consensus       183 ~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~li~~rr~------------~~~ddl~s~L~~~~~~-  236 (417)
T 4dxy_A          183 RQMTRPEG------NTP-------EEMATDLEAGNNGFYAYVDPIIRARVG------------GDGDDLITLMVNSEIN-  236 (417)
T ss_dssp             HHHHSCCC------SSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCCSHHHHHHTCEET-
T ss_pred             hhhccccc------cCh-------HHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCccchhhhhcccccc-
Confidence            33211000      011       112234445566677777777776654            4567999999876544 


Q ss_pred             CCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhh
Q 048742          290 EDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETL  369 (472)
Q Consensus       290 ~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  369 (472)
                        +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|....                  ..++.|. 
T Consensus       237 --~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~avee~-  295 (417)
T 4dxy_A          237 --GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGAEEM-  295 (417)
T ss_dssp             --TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTHHHH-
T ss_pred             --CCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccceeee-
Confidence              6679999999999999999999999999999999999999999999986533                  2233444 


Q ss_pred             cCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCCCCccccccCCccccCCccceeecCCCcc
Q 048742          370 RLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFHPERFLKELGKLEYQGTNFRYLPFGSGRR  449 (472)
Q Consensus       370 Rl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~p~R~l~~~~~~~~~~~~~~~~~Fg~G~r  449 (472)
                      |++++.+.. .|.+.+|++++|+.||+|+.|.++.+++||||++|+||++|||+|+            +..|+|||+|+|
T Consensus       296 ~~~~~~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~------------~~~~l~FG~G~r  362 (417)
T 4dxy_A          296 FRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR------------SISHSTFGGGPH  362 (417)
T ss_dssp             HHHSCCBEE-EEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------------CCCCCTTCCGGG
T ss_pred             ecccccccc-ccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC------------CCCCCCcCCCcc
Confidence            444444443 6999999999999999999999999999999999999999999993            235899999999


Q ss_pred             cccChHHHHHHHHHHHHHHhhcC
Q 048742          450 ICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       450 ~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      .|+|++||++|++++++.||++|
T Consensus       363 ~ClG~~LA~~E~~i~l~~Ll~rf  385 (417)
T 4dxy_A          363 RCAGMHLARMEVIVTLEEWLKRI  385 (417)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             cCccHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999987


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.5e-45  Score=336.49  Aligned_cols=305  Identities=16%  Similarity=0.176  Sum_probs=209.7

Q ss_pred             CCCC-CCCCcccccccc-----CCCChhHHHHHHHHhhCCeEEEecCCccEEEEcCHHHHHHHHHhccccccCCCCcc-h
Q 048742           36 LPPG-PLGLPVLGNLLS-----IEPDFHRYCAKLSRVYGPIFKLKLGSKICIHISSPSLAKQILKDQDAIFANRDPPA-S  108 (472)
Q Consensus        36 ~ppg-p~~~p~~G~~~~-----~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~v~dp~~v~~i~~~~~~~~~~~~~~~-~  108 (472)
                      .||| +.++|++|+...     +..+++.++.+++++  +|+++.   ...++|++++.+++|++++  .|+...... .
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence            3556 446799997643     467899999999876  999865   3579999999999999873  455443211 0


Q ss_pred             hh------hhccCCcceEeCCCChhHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHH
Q 048742          109 AL------VTSYGLHDIVWMPNGPEWRQLRKVFVREMMSSLNLDDCALRRAEVREMVKEVYKKVGSPINLGEQM-FLAIL  181 (472)
Q Consensus       109 ~~------~~~~~~~~~~~~~~~~~~~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~  181 (472)
                      ..      ....+ .+ +...||+.|       .+ .|+ .    .+.+++.++++++.+.    +.+|+...+ ..+++
T Consensus       108 ~~~~~~~~~~~~~-~~-l~~~dg~~H-------~~-~Ft-~----~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~~  168 (381)
T 2yjn_B          108 WMRAAGAPPAEWA-QP-FRDVHAASW-------EG-EVP-D----VGELAESFAGLLPGAG----ARLDLVGDFAWQVPV  168 (381)
T ss_dssp             HHHHHTCCHHHHT-HH-HHHHHHCCC-------CS-CCC-C----CSCHHHHTSTTSCC----------CCCCCCTHHHH
T ss_pred             cccccccccchhh-hh-hhhCCchhh-------hh-ccC-C----hHHHHHHHHHHHHhcc----CcchHHHHHHHHHHH
Confidence            00      01111 22 334568888       33 666 2    2566777777777775    368888665 68999


Q ss_pred             HHHHHHHhcCCCCCCcccchhHHHHHHHHHHHHHhCCCcccchhhhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 048742          182 NVVMNMLWGSSLHGEERSSVGVEFRQVVGEIVEMLGKPNISDLFPTLAWLDLQGIESKTKKLVLWFDRIFDSVIVQRMKI  261 (472)
Q Consensus       182 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (472)
                      ++|+++ ||.+.+..       ++   .+.+....      . .+    +..    ....+.    .             
T Consensus       169 ~vi~~l-~G~~~~~~-------~~---~~~~~~~~------~-~~----~~~----~~~~~~----~-------------  205 (381)
T 2yjn_B          169 QGMTAV-LGAAGVLR-------GA---AWDARVSL------D-AQ----LSP----QQLAVT----E-------------  205 (381)
T ss_dssp             HHHHTC------CCH-------HH---HHHHTTHH------H-HT----TSC----CCHHHH----H-------------
T ss_pred             HHHHHH-cCCCHHHH-------HH---HHHHHHhc------c-CC----CCH----HHHHHH----H-------------
Confidence            999995 99876421       11   11110000      0 00    000    000000    0             


Q ss_pred             hHhhhhhcccccccccHHHHHHHHhhcCCCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 048742          262 DAAKGQISKQNEENKDFLHFLLELKQQGEDKTSLSMTQIKGLLLDTVLGGTDTTSTTLEWAMAEMLQHSEIMRKVQQELD  341 (472)
Q Consensus       262 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  341 (472)
                                     +.+..++             +    +++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus       206 ---------------~~~~~l~-------------~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~  253 (381)
T 2yjn_B          206 ---------------AAVAALP-------------A----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA  253 (381)
T ss_dssp             ---------------HHHHHCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
T ss_pred             ---------------HHHHHHH-------------H----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH
Confidence                           0000000             0    6788899999999999999999999999999999999864


Q ss_pred             HhhcCCcceecccCCCCccHHHHHHhhhcCCCCCCCCCCccccccccccCeecCCCCEEEEeeecccCCCCCCCCCCCCC
Q 048742          342 EVVGNGSIVEESHIPKLHFLQSVVKETLRLHPPLPLLVPHCPVESCTVGGYTIPKGSRVFVNVWSMHRDPEAWQNPLEFH  421 (472)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  421 (472)
                                        |+++||+|+||++|+++.. +|.+.+|++++|+.||||+.|.++.+++|+||++|+||++||
T Consensus       254 ------------------~l~~~i~E~LR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~  314 (381)
T 2yjn_B          254 ------------------AAQRTVAEVLRLHPALHLE-RRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLD  314 (381)
T ss_dssp             --------------------HHHHHHHHHHSCSCSEE-EEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred             ------------------HHHHHhCeeeeecCCCcce-eEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccC
Confidence                              8999999999999999974 699999999999999999999999999999999999999999


Q ss_pred             CCccccccCCccccCCccceeecCCCcccccChHHHHHHHHHHHHHHhhcC
Q 048742          422 PERFLKELGKLEYQGTNFRYLPFGSGRRICAGISLAEKMVAYVLATLLHSF  472 (472)
Q Consensus       422 p~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~e~~~~l~~ll~~f  472 (472)
                      |+||++           ..++|||+| |.|+|++||.+|++++++.|+++|
T Consensus       315 p~R~~~-----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~  353 (381)
T 2yjn_B          315 VDRPDA-----------DRALSAHRG-HPGRLEELVTALATAALRAAAKAL  353 (381)
T ss_dssp             SSCSCC-----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCCCC-----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhC
Confidence            999984           258999999 999999999999999999999987


No 78 
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=62.39  E-value=16  Score=20.78  Aligned_cols=20  Identities=0%  Similarity=0.185  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcC
Q 048742           12 RVIATMSVAIIAVSWLIKKS   31 (472)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~   31 (472)
                      -+++++++.+.+.+|+++++
T Consensus        20 Gvll~vi~~l~~~~~~RRR~   39 (44)
T 2jwa_A           20 GILLVVVLGVVFGILIKRRQ   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhheehhh
Confidence            34444444555555665554


No 79 
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=48.98  E-value=23  Score=17.18  Aligned_cols=18  Identities=11%  Similarity=0.619  Sum_probs=8.6

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 048742           10 VVRVIATMSVAIIAVSWL   27 (472)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~   27 (472)
                      ++.+++.++.+.+++.|+
T Consensus         8 ~lLIviav~aaVllylW~   25 (26)
T 3j1r_A            8 LLLILIAVAAAVLLYTWV   25 (26)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            444444444455555554


No 80 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=46.43  E-value=57  Score=21.04  Aligned_cols=51  Identities=24%  Similarity=0.338  Sum_probs=34.7

Q ss_pred             cccccccCCCC----hhHHHHHHHHhhCCeEEEecC-------CccEEEEcCHHHHHHHHHh
Q 048742           45 VLGNLLSIEPD----FHRYCAKLSRVYGPIFKLKLG-------SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        45 ~~G~~~~~~~~----~~~~~~~~~~~yg~v~~~~~~-------~~~~v~v~dp~~v~~i~~~   95 (472)
                      ++|++..-..+    ..+.+.++..+||+|..+.+.       |--+|-..+++.+...+..
T Consensus         5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A            5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            34555432222    346788889999999888775       3345667888888877754


No 81 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.92  E-value=98  Score=21.23  Aligned_cols=50  Identities=16%  Similarity=0.193  Sum_probs=37.2

Q ss_pred             cccccccCCC--ChhHHHHHHHHhhC-CeEEEecCCccEEEEcCHHHHHHHHHh
Q 048742           45 VLGNLLSIEP--DFHRYCAKLSRVYG-PIFKLKLGSKICIHISSPSLAKQILKD   95 (472)
Q Consensus        45 ~~G~~~~~~~--~~~~~~~~~~~~yg-~v~~~~~~~~~~v~v~dp~~v~~i~~~   95 (472)
                      .++|+..-.+  ....-+.++..+|| .|..+ .+|+-+|...+.+.++..++.
T Consensus        13 YV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~   65 (96)
T 2diu_A           13 YVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR   65 (96)
T ss_dssp             EEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred             EEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence            3677765432  23445788999995 99888 458899999999999887764


No 82 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=31.96  E-value=39  Score=15.72  Aligned_cols=12  Identities=25%  Similarity=0.681  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHH
Q 048742          331 EIMRKVQQELDE  342 (472)
Q Consensus       331 ~~~~~l~~Ei~~  342 (472)
                      .+|.++|.|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            478899999864


No 83 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=30.28  E-value=26  Score=29.53  Aligned_cols=24  Identities=25%  Similarity=0.508  Sum_probs=19.5

Q ss_pred             cCCCCEEEEeeecccCCCCCCCCC
Q 048742          394 IPKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       394 ip~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      =|.||.|+......+.||+.|.+|
T Consensus        63 g~~GTLvmPt~t~~~~dp~~w~~p   86 (268)
T 3ijw_A           63 TEEGTIIMPTQSSDLSDPKHWSRP   86 (268)
T ss_dssp             CTTSEEEEECCCGGGSCGGGCCSS
T ss_pred             CCCCeEEEeccccccCChhhhcCC
Confidence            368998888887778899999766


No 84 
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=29.30  E-value=1.4e+02  Score=20.43  Aligned_cols=53  Identities=23%  Similarity=0.320  Sum_probs=37.3

Q ss_pred             CccccccccCCCC----hhHHHHHHHHhhCCeEEEecC-------CccEEEEcCHHHHHHHHHh
Q 048742           43 LPVLGNLLSIEPD----FHRYCAKLSRVYGPIFKLKLG-------SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        43 ~p~~G~~~~~~~~----~~~~~~~~~~~yg~v~~~~~~-------~~~~v~v~dp~~v~~i~~~   95 (472)
                      .-++|++..-...    ....+.++..+||+|..+.+.       |--+|...+++.+...+..
T Consensus        17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~   80 (105)
T 2nlw_A           17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   80 (105)
T ss_dssp             EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred             EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence            3466777753322    457788999999999888875       3445666788877777764


No 85 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=28.74  E-value=1.5e+02  Score=20.60  Aligned_cols=58  Identities=21%  Similarity=0.221  Sum_probs=38.6

Q ss_pred             CCCCCCCCccccccccCCCChhHHHHHHHHhhCCeEEEecC------CccEEEEcCHHHHHHHHHh
Q 048742           36 LPPGPLGLPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLG------SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        36 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~v~dp~~v~~i~~~   95 (472)
                      .||.|...-++|++..-  --...+.++..+||+|..+.+.      |.-+|-..+++.+...+..
T Consensus         3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~   66 (115)
T 3lqv_A            3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH   66 (115)
T ss_dssp             CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence            44544445566776532  2345678888999999887762      3456777888888877763


No 86 
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=28.38  E-value=29  Score=29.43  Aligned_cols=25  Identities=28%  Similarity=0.509  Sum_probs=19.9

Q ss_pred             ecCCCCEEEEeeecccCCCCCCCCC
Q 048742          393 TIPKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       393 ~ip~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      .=|.||.|+......+.||+.|.+|
T Consensus        60 vg~~GTLvmPtft~~~~dp~~w~~~   84 (273)
T 2nyg_A           60 VTEEGTIVMPSQSVELSDPKEWGNP   84 (273)
T ss_dssp             HTTTSEEEEECCCTTSSCGGGCCSS
T ss_pred             hCCCCeEEEeccccccCChhhhcCC
Confidence            3468998888888888889888765


No 87 
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=26.23  E-value=1.4e+02  Score=19.62  Aligned_cols=48  Identities=8%  Similarity=0.089  Sum_probs=33.5

Q ss_pred             CccccccccCCCChhHHHHHHHHhhCCeEEEecC----CccEEEEcCHHHHHHH
Q 048742           43 LPVLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLG----SKICIHISSPSLAKQI   92 (472)
Q Consensus        43 ~p~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~v~dp~~v~~i   92 (472)
                      .-++|++..-  --.+.+.++.++||+|..+.+.    |--+|...+++.++.+
T Consensus        13 ~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~   64 (89)
T 3d2w_A           13 KVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL   64 (89)
T ss_dssp             EEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred             EEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence            3455665542  1356688889999999988875    4556777899888753


No 88 
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=25.91  E-value=1.1e+02  Score=21.01  Aligned_cols=39  Identities=13%  Similarity=0.157  Sum_probs=31.1

Q ss_pred             hHHHHHHHHhhCCeEEEecCCccE-EEEcCHHHHHHHHHh
Q 048742           57 HRYCAKLSRVYGPIFKLKLGSKIC-IHISSPSLAKQILKD   95 (472)
Q Consensus        57 ~~~~~~~~~~yg~v~~~~~~~~~~-v~v~dp~~v~~i~~~   95 (472)
                      ..-+.++...||.|..-|+..+.. +++.+|+.+++++..
T Consensus        29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~   68 (100)
T 1whv_A           29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT   68 (100)
T ss_dssp             HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred             hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence            567889999999887778877554 556899999999873


No 89 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.60  E-value=1.6e+02  Score=20.13  Aligned_cols=50  Identities=10%  Similarity=0.112  Sum_probs=34.0

Q ss_pred             cccccccCCCChhHHHHHHHHhhCCeEEEecC--------CccEEEEcCHHHHHHHHHhc
Q 048742           45 VLGNLLSIEPDFHRYCAKLSRVYGPIFKLKLG--------SKICIHISSPSLAKQILKDQ   96 (472)
Q Consensus        45 ~~G~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~v~dp~~v~~i~~~~   96 (472)
                      ++|++..-  --...+.++..+||+|..+.+.        |--+|...+++.+...+...
T Consensus        15 fV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~   72 (103)
T 1s79_A           15 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP   72 (103)
T ss_dssp             EEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred             EEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence            44554432  2355678888999999877653        34566778999998888643


No 90 
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=24.31  E-value=39  Score=28.76  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=18.8

Q ss_pred             CCCCEEEEeeecccCCCCCCCCC
Q 048742          395 PKGSRVFVNVWSMHRDPEAWQNP  417 (472)
Q Consensus       395 p~G~~v~~~~~~~~~d~~~~~~p  417 (472)
                      |.||.|+......+.||+.|.+|
T Consensus        71 ~~GTLvmPt~t~~~~d~~~~~~p   93 (286)
T 3sma_A           71 KEGTLVMPTFSGDLSDPSTWRRP   93 (286)
T ss_dssp             TTCEEEEECCCTTSSCGGGCCSS
T ss_pred             CCCEEEEeccCcccCChhhhcCC
Confidence            78998888877778889888766


No 91 
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=24.28  E-value=30  Score=18.53  Aligned_cols=17  Identities=6%  Similarity=0.190  Sum_probs=6.7

Q ss_pred             HHHHHHHHHHHHHHHhh
Q 048742           13 VIATMSVAIIAVSWLIK   29 (472)
Q Consensus        13 ~~~~~~~~~~~~~~~~~   29 (472)
                      +++++++.+....|+++
T Consensus        17 lll~vii~l~~~~~iRR   33 (35)
T 1iij_A           17 VLLFLILVVVVGILIKR   33 (35)
T ss_dssp             HHHHHHHTTTTTHHHHH
T ss_pred             HHHHHHHHHHhheEEee
Confidence            33333333333344443


No 92 
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=22.62  E-value=1.5e+02  Score=18.43  Aligned_cols=40  Identities=13%  Similarity=0.172  Sum_probs=29.1

Q ss_pred             hHHHHHHHHhhCCeEEEecC---------CccEEEEcCHHHHHHHHHhc
Q 048742           57 HRYCAKLSRVYGPIFKLKLG---------SKICIHISSPSLAKQILKDQ   96 (472)
Q Consensus        57 ~~~~~~~~~~yg~v~~~~~~---------~~~~v~v~dp~~v~~i~~~~   96 (472)
                      .+.+.++.++||+|..+.+.         |--+|-..+++.++..+...
T Consensus        13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~   61 (75)
T 1iqt_A           13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK   61 (75)
T ss_dssp             HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred             HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence            45678888999998887763         23456667888888887653


No 93 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.94  E-value=83  Score=17.89  Aligned_cols=29  Identities=24%  Similarity=0.468  Sum_probs=18.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceecccCCCCccHHHHHHhhhcC
Q 048742          330 SEIMRKVQQELDEVVGNGSIVEESHIPKLHFLQSVVKETLRL  371 (472)
Q Consensus       330 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  371 (472)
                      .++.+.+|.|++.+..             ..++|+-.|.-|-
T Consensus        14 qEIL~E~RkElqK~K~-------------EIIeAi~~El~~~   42 (45)
T 1use_A           14 QELLEEVKKELQKVKE-------------EIIEAFVQELRKR   42 (45)
T ss_dssp             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhc
Confidence            4667777777766532             2566666666553


No 94 
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=21.26  E-value=1.2e+02  Score=21.53  Aligned_cols=59  Identities=10%  Similarity=0.131  Sum_probs=37.3

Q ss_pred             CCCCCCCccccccccCCC--------ChhHHHHHHHHhhCCeEEEecC-----CccEEEEcCHHHHHHHHHh
Q 048742           37 PPGPLGLPVLGNLLSIEP--------DFHRYCAKLSRVYGPIFKLKLG-----SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        37 ppgp~~~p~~G~~~~~~~--------~~~~~~~~~~~~yg~v~~~~~~-----~~~~v~v~dp~~v~~i~~~   95 (472)
                      ||.|..+-.+.|+..-..        +..+-+.+...+||.|..+.+.     |.-+|-..+++.+......
T Consensus         3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~   74 (114)
T 3s6e_A            3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA   74 (114)
T ss_dssp             CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence            567777777777766421        1233456667899998777763     3345556788777666643


No 95 
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=20.26  E-value=1.6e+02  Score=20.30  Aligned_cols=57  Identities=18%  Similarity=0.243  Sum_probs=34.4

Q ss_pred             CCCCCcccccccc---CCCChhHHHHHHHHhhCCeEEEecC----------CccEEEEcCHHHHHHHHHh
Q 048742           39 GPLGLPVLGNLLS---IEPDFHRYCAKLSRVYGPIFKLKLG----------SKICIHISSPSLAKQILKD   95 (472)
Q Consensus        39 gp~~~p~~G~~~~---~~~~~~~~~~~~~~~yg~v~~~~~~----------~~~~v~v~dp~~v~~i~~~   95 (472)
                      .|..+-++.|+..   +..+...-+.+...+||.|..+.+.          |.-+|-..+++.+......
T Consensus         6 ~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~   75 (105)
T 2pe8_A            6 CPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVD   75 (105)
T ss_dssp             SCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHH
Confidence            3444556666653   2334567788888999998777653          1224555788877666643


Done!