Your job contains 1 sequence.
>048746
MTLDYDCCNNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWE
EHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSAL
EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGC
TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN
LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF
KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKH
RTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI
DPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDN
TVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTK
VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMN
FHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV
TSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHE
LVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048746
(755 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 3041 4.0e-317 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 2965 4.7e-309 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 2336 2.1e-242 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 2321 8.2e-241 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 2316 2.8e-240 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 2281 8.8e-239 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 2288 2.6e-237 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 2287 3.3e-237 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 2286 4.2e-237 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 2282 1.1e-236 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 2282 1.1e-236 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 2206 2.6e-230 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 2206 2.6e-230 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 2193 3.0e-227 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 2131 1.1e-220 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 2121 1.3e-219 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1917 4.0e-201 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1920 2.8e-200 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1920 2.8e-200 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1920 2.8e-200 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1920 2.8e-200 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1918 4.5e-200 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1918 4.5e-200 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1918 4.5e-200 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1918 4.5e-200 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1914 1.2e-199 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1900 3.4e-196 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1876 6.0e-196 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1876 6.0e-196 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1894 1.5e-195 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1823 6.4e-190 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1818 1.7e-187 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1768 1.4e-185 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1767 4.2e-184 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1763 1.1e-181 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1761 1.8e-181 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1761 1.8e-181 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1720 1.5e-179 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1734 1.3e-178 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1723 1.9e-177 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1723 1.9e-177 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1681 2.2e-176 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1684 2.5e-175 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1679 4.1e-175 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1679 4.1e-175 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1678 5.2e-175 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1689 7.7e-174 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1684 2.6e-173 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1682 4.3e-173 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1670 8.0e-172 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1645 3.6e-169 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1645 3.6e-169 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1643 5.8e-169 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1613 1.9e-168 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1631 1.1e-167 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1630 1.4e-167 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1625 4.7e-167 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1622 9.7e-167 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1622 9.7e-167 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1622 9.7e-167 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1622 9.7e-167 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1622 9.7e-167 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1622 9.7e-167 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1618 2.6e-166 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1614 6.8e-166 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1579 3.1e-164 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1593 1.2e-163 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1583 1.3e-162 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1583 1.3e-162 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1576 7.3e-162 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1563 1.7e-160 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1535 1.6e-157 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1530 5.5e-157 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1496 2.2e-153 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1481 8.5e-152 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1480 1.1e-151 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 829 2.6e-151 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 829 2.6e-151 3
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1474 4.7e-151 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1470 1.2e-150 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1469 1.6e-150 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1468 2.0e-150 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1463 6.9e-150 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1463 6.9e-150 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 1447 3.4e-148 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 761 5.9e-147 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 761 5.9e-147 3
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 1049 1.4e-146 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 952 3.9e-146 3
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 952 1.0e-145 3
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1403 1.6e-143 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1306 4.3e-143 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1396 8.6e-143 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1301 1.4e-142 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1388 6.1e-142 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1374 1.9e-140 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1345 4.4e-139 2
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 970 1.7e-137 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1329 1.1e-135 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 1308 1.4e-135 2
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 3041 (1075.5 bits), Expect = 4.0e-317, P = 4.0e-317
Identities = 576/751 (76%), Positives = 663/751 (88%)
Query: 9 NNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRY-NLDSAGDKMNPFAEQEAWEEHQMGKA 67
+NV+ +YRIPDAYD+EG V+QEKRF+V++QRY +LDS +KMNPFAEQEAWE+HQ+GKA
Sbjct: 283 DNVE--EYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDST-EKMNPFAEQEAWEDHQIGKA 339
Query: 68 SLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSK---EKSALEMLQ 124
+LK+G+KNK S+DY++VFED+I+FI++SV+ GEN ++ + KS+ EK+ALE LQ
Sbjct: 340 TLKFGAKNKQASDDYQFVFEDQINFIKESVMAGENYEDA-MDAKQKSQDLAEKTALEELQ 398
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPX 184
E R++LPIY YRD+LL+AV E+QVLVIVG+TGSGKTTQIPQYLHEAGYTK+GKVGCTQP
Sbjct: 399 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPR 458
Query: 185 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
QEMGVKLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE+L EP+L SY
Sbjct: 459 RVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASY 518
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
SV++VDEAHERTLSTDILFGL+KD+ +FR DLKLLISSAT+DAEKFSDYF +APIF PG
Sbjct: 519 SVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPG 578
Query: 305 RRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRG 364
RRYPVEI+YT APEADY+DAAIVT+L IHV + GDILVF TGQEEIETA+EILKHR RG
Sbjct: 579 RRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRG 638
Query: 365 LGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGF 424
LG+KI ELIICPIYANLP+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF
Sbjct: 639 LGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGF 698
Query: 425 SKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPE 484
SK+KSYNPRTGMESLL+ PISKASA QRAGR+GRT PGKC+RLYT NY+ D+++NTVPE
Sbjct: 699 SKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPE 758
Query: 485 IQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRR 544
+QRTNLA+VVL LKSLGI DL+NFDF+DPPP GELTK GRR
Sbjct: 759 VQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRR 818
Query: 545 MAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLG 604
MAEFPLDPMLSKMIV SDK KCSDEII+IAAMLS+G SIFYRPKDKQVHADNARMNFH G
Sbjct: 819 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTG 878
Query: 605 NVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNL 664
NVGDHIALL+VY+SW+E N+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNL
Sbjct: 879 NVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNL 938
Query: 665 NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT 724
N+LD+++K+I +GFFPH+AKLQKNGSY TVKHPQ VHIHP+SGL+QVLPRWVVYHELVLT
Sbjct: 939 NELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLT 998
Query: 725 TKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
+KEYMRQVTELKPEWL+E+APHYYQLKDVED
Sbjct: 999 SKEYMRQVTELKPEWLIELAPHYYQLKDVED 1029
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 2965 (1048.8 bits), Expect = 4.7e-309, P = 4.7e-309
Identities = 561/742 (75%), Positives = 638/742 (85%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSK 74
+YR+PDAYD++G V+QEKRFAVS+QRY + +KMNPFAEQEAWE+HQ+ A+LK+G+K
Sbjct: 288 EYRMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAK 347
Query: 75 NKNQSNDYEYVFEDKIDFIRDSVIDGENL-DELHSELPDKSKEKSALEMLQEERKTLPIY 133
NK S++YE+VFED+IDFI+ SV+ G+N DE+H++ S KSA MLQE+RK LPIY
Sbjct: 348 NKEVSDNYEFVFEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIY 407
Query: 134 PYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXX 193
YRD+LL AV ++QVL+IVGETGSGKTTQIPQYLHEAGYTK GKVGCTQP
Sbjct: 408 TYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAA 467
Query: 194 XXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAH 253
QEMG KLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE+L EP+L SYSV++VDEAH
Sbjct: 468 RVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAH 527
Query: 254 ERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
ERTL TDILFGL+KD+ + R DLKLLISSAT+DAEKFSD+F APIF+ PGRRYPV+I +
Sbjct: 528 ERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICF 587
Query: 314 TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELI 373
T APEADY+DAAI TVL IHV + GD+LVFL GQEEIE +E LKH+ RGLG+KI ELI
Sbjct: 588 TTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELI 647
Query: 374 ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPR 433
ICPIYANLP+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPR
Sbjct: 648 ICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPR 707
Query: 434 TGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANV 493
TGMESLLV PISKASA QR GR+GRT PGKC+RLYT NY+ D++DNTVPEIQRTNLA+V
Sbjct: 708 TGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASV 767
Query: 494 VLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
VL LKSLGI +L+NFDF+DPPP GELTK GRRMAEFPLDPM
Sbjct: 768 VLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPM 827
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
LSKMIV SDK KCSDEII+IAAMLS+G SIFYRPKDKQVHADNA NFH+GNVGDHIA L
Sbjct: 828 LSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFL 887
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
++YNSW+E NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+V+SN N+LD+I+K+
Sbjct: 888 KIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKS 947
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVT 733
I +GFFPH+AKLQKNGSY TVKHPQ VHIHP+SGL+QVLPRWVVYH+LVLT+KEYMRQVT
Sbjct: 948 IVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVT 1007
Query: 734 ELKPEWLVEIAPHYYQLKDVED 755
ELKPEWL+EIAPHYYQLKDVED
Sbjct: 1008 ELKPEWLIEIAPHYYQLKDVED 1029
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 2336 (827.4 bits), Expect = 2.1e-242, P = 2.1e-242
Identities = 455/742 (61%), Positives = 564/742 (76%)
Query: 20 DAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKA-SLKYGSKNKN- 77
D+ + ++N K ++ N S+ NP EQ+ WE+++M A S G N
Sbjct: 359 DSLLKSSYINDNKN-----KKGNDSSSSSSYNP--EQKEWEQNRMKSAISENRGLSTANI 411
Query: 78 --QSNDYEYVFEDKIDFIRDSVI-DGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
+ +YEYVFED+I+FI++ V+ G+ D + P A +QE RK+LP+YP
Sbjct: 412 GGGNEEYEYVFEDQIEFIKEEVLKQGQKGDGVMILKPGDDGSAQAKMTIQEVRKSLPVYP 471
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXX 194
YR++L+ AV EYQVL+IVGETGSGKTTQIPQYLHEAG++K GK+GCTQP
Sbjct: 472 YREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAAR 531
Query: 195 XXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHE 254
+E+G KLG+EVGYSIRFEDCTS+KT+L+YMTDGML+RE L+ P+L SYSVL++DEAHE
Sbjct: 532 VAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHE 591
Query: 255 RTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYT 314
RTL TDILFGLLKD+ +FR DLKLLISSAT+DAE+FSDYF AP F IPGR+Y V HYT
Sbjct: 592 RTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYT 651
Query: 315 KAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELII 374
+APEADY+DAA+VTVLQIH+T+ GDILVFLTGQEE++ A E+L+ RTRGLG+KI ELII
Sbjct: 652 QAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELII 711
Query: 375 CPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRT 434
IY+ LPT+LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVIDPGF K K +NPRT
Sbjct: 712 TRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRT 771
Query: 435 GMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVV 494
GMESL++ P+S+ASA QR GR+GR PGKCFRL+T + ++++NT+PEIQRTNL NVV
Sbjct: 772 GMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVV 831
Query: 495 LILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L+LKS+GI+DL+NFDF+DPPP G+LTK+GR+MAEFP+DP L
Sbjct: 832 LLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQL 891
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNAR-MNFHLGNVGDHIALL 613
SKMI+AS+K KCS+EI+TI AMLSVGN+IFYRPKDK AD AR + FH GDH+ L+
Sbjct: 892 SKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFH--PQGDHLTLM 949
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
V+N WRE Y+ QWC+EN+IQ RSMKRA+D+RDQLE LLERVEI + SN++D D+I+K
Sbjct: 950 NVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKC 1009
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVT 733
I SGFF +SAKL+K+G + T KH Q V IHPSS L Q P+WVVYHELVLTTKE+MRQ+
Sbjct: 1010 IASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIV 1069
Query: 734 ELKPEWLVEIAPHYYQLKDVED 755
E++ WL EIAPH Y+ KDV D
Sbjct: 1070 EIQSSWLHEIAPHIYKEKDVND 1091
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 2321 (822.1 bits), Expect = 8.2e-241, P = 8.2e-241
Identities = 441/707 (62%), Positives = 553/707 (78%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELP 111
P +EQ+ WE Q+ A +G+K+ +YE + +D+IDFI+ +DG ++ S P
Sbjct: 175 PNSEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFIQALTLDGSR-EKSSSRQP 233
Query: 112 DKS-KEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
+ + KE+ L L E R++LP+YP++++L+ AV E+QVL+I GETGSGKTTQ+PQYL EA
Sbjct: 234 ELTEKERKRLT-LDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEA 292
Query: 171 GYTKQGK-VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDG 229
G+TK K +GCTQP +EMGVKLG+EVGYSIRFEDCTS++TILKYMTDG
Sbjct: 293 GFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDG 352
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
L RE LSEP+L SYSV+++DEAHERTL TDILFGL+KD+ +FR +LKLLISSATLDAEK
Sbjct: 353 TLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEK 412
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
FS +F APIF+IPGRRYPV+I YTKAPEADYIDA V+VLQIH TQ GDILVFLTGQ+
Sbjct: 413 FSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQD 472
Query: 350 EIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAET 409
EIET E+L R + LGSKI ELI+ P+YANLP+++QAKIFEPTP ARKV+LATNIAET
Sbjct: 473 EIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAET 532
Query: 410 SLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYT 469
SLTID I YVIDPGF+K ++N RTGMESL+V PISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 533 SLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYT 592
Query: 470 LHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXX 529
Y +++DNTVPEIQR NL N VL+LK+LGI+DL++FDF+DPPP
Sbjct: 593 AWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYAL 652
Query: 530 XXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD 589
GELTK+GRRMAEFP+DPM+ KM++AS+K KCS+E++TIAAMLSV ++IFYRPKD
Sbjct: 653 GALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKD 712
Query: 590 KQVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQ 648
K +HAD AR NF H+ GDH++LL+VYN W E +YSTQWCYEN+IQ RSMKRARD+R+Q
Sbjct: 713 KIIHADTARKNFNHMH--GDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQ 770
Query: 649 LEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
L GL++RVEI++ S L + ++KA T+G+F H A+L K G Y T+KH Q V IHP+S L
Sbjct: 771 LVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSL 830
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
+ LPRWV+YHELV T+KEYMRQV E++ +WL+E+APHYY+ K++ED
Sbjct: 831 FEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELED 877
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 2316 (820.3 bits), Expect = 2.8e-240, P = 2.8e-240
Identities = 440/710 (61%), Positives = 556/710 (78%)
Query: 55 EQEAWEEHQMGKASLKYGSKN------KNQSNDYEYVFEDK--IDFIRDSVIDGENLDEL 106
EQ WEE ++ A+L++G++ K + Y+ + E++ I F+ ++ L E
Sbjct: 330 EQGRWEEARVATATLQFGARQERERRIKEEQERYQLILEEEEMITFVSTAITMKGTLSEK 389
Query: 107 HSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQY 166
SE P+ S+ + + +QE R++LPI+PYR++LL A+ ++Q+LVI GETGSGKTTQIPQY
Sbjct: 390 ESE-PELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQY 448
Query: 167 LHEAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKY 225
L E GYTK G K+GCTQP QEM VKLG+EVGYSIRFEDCTSE+TILKY
Sbjct: 449 LLEEGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKY 508
Query: 226 MTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATL 285
MTDGMLLRE L+EP+L SYSV+++DEAHERTL TDILFGL+KD+ +FR DLK+L++SATL
Sbjct: 509 MTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATL 568
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFL 345
D E+FS +F AP+F+IPGRR+PV+I+YTKAPEADY++A +V+VLQIHVTQSPGD+LVFL
Sbjct: 569 DTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFL 628
Query: 346 TGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATN 405
TGQEEIE E+L+ R R LGSKI+EL++ PIYANLP+++QAKIF PTP GARKVV+ATN
Sbjct: 629 TGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATN 688
Query: 406 IAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCF 465
IAETSLTIDGI YVIDPGF K KSYN +TGMESL+V P S+ASA QRAGR+GR GKCF
Sbjct: 689 IAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCF 748
Query: 466 RLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXX 525
RLYT + +M++ TVPEIQRTNL NVVL+LKSLGI+DL++FDF+DPPP
Sbjct: 749 RLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQ 808
Query: 526 XXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFY 585
GELTK+GRRMAE P+DPMLSKMI+AS++ KCS+E++TIAAMLSV NSIFY
Sbjct: 809 LYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFY 868
Query: 586 RPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDI 645
RPKDK VHADNARMNF + GDH+ LL VY W E YSTQWC+EN+IQ RSMKRARD+
Sbjct: 869 RPKDKVVHADNARMNFVVPG-GDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDV 927
Query: 646 RDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS 705
RDQLEGL++R+E+E+ S+ D I+KA+T+G+F H+A+L K G Y TVKH Q V++HP+
Sbjct: 928 RDQLEGLMDRIEVELCSSNGDSMPIRKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPN 986
Query: 706 SGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
S L + PRW++YHELV TTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 987 SSLFEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYYKNKELED 1036
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 2281 (808.0 bits), Expect = 8.8e-239, Sum P(2) = 8.8e-239
Identities = 438/708 (61%), Positives = 550/708 (77%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G DE S
Sbjct: 322 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQG---DEEPS 378
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P S + E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 379 A-PPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 437
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT +G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 438 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 497
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D
Sbjct: 498 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDT 557
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 558 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 617
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 618 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 677
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 678 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 737
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 738 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 797
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 798 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 857
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 858 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 916
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 917 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 975
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 976 LFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1023
Score = 44 (20.5 bits), Expect = 8.8e-239, Sum P(2) = 8.8e-239
Identities = 29/131 (22%), Positives = 53/131 (40%)
Query: 12 KSLQYRIPDAYDEEGHVNQEKRFAVSLQ--RYNLDSAGDKMNPFAEQEAWEEHQMGKASL 69
K+ YR+ + EE R SLQ R K E+EA E+ +
Sbjct: 93 KNRSYRLLED-SEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGS 151
Query: 70 KYGSKNKNQSNDYEYVFEDKIDFI--RDSVIDG---ENLDELHS--ELPDKSKEKSA--- 119
K ++ +++E +++ + RD+ + + D + E DK + A
Sbjct: 152 KQQTEKPESEDEWERTERERLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKR 211
Query: 120 LEMLQEERKTL 130
L+M +E+RK +
Sbjct: 212 LKMAEEDRKAM 222
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 2288 (810.5 bits), Expect = 2.6e-237, P = 2.6e-237
Identities = 441/708 (62%), Positives = 548/708 (77%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNKN-QSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++ ASLK+G+++ Q Y+ V E+ I+F+R + + G DE S
Sbjct: 324 PGEEQRRWEEARLDAASLKFGARDAAAQEPQYQLVLEEDETIEFVRAAQLQG---DEEPS 380
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P S + E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 381 SGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLF 440
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYTK+G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 441 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 500
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 501 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 560
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 561 ARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 620
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 621 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 680
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 681 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 740
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 741 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 800
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 801 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 860
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 861 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 919
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ +TS D ++KAITSG+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 920 QLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 978
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 979 LFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1026
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 2287 (810.1 bits), Expect = 3.3e-237, P = 3.3e-237
Identities = 438/708 (61%), Positives = 554/708 (78%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G N +
Sbjct: 323 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQG-NEEPSGP 381
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P ++++K E +Q R++LP++P+R+ELL A+ ++QVL+I GETGSGKTTQIPQYL
Sbjct: 382 SPPSQAQQK---ESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLF 438
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYTK+G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 439 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 498
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 499 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 558
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 559 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 618
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 619 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 678
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 679 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 738
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 739 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 798
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 799 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 858
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 859 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 917
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 918 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 976
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 977 LFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1024
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 2286 (809.8 bits), Expect = 4.2e-237, P = 4.2e-237
Identities = 438/708 (61%), Positives = 553/708 (78%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G+ +
Sbjct: 326 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE-EPSAP 384
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P ++++K E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 385 PAPTQAQQK---ESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 441
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYTK+G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 442 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 501
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 502 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 561
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F APIF+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 562 ARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 621
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 682 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 741
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 742 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 801
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 802 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 862 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 920
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 921 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 979
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 980 LFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1027
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 2282 (808.4 bits), Expect = 1.1e-236, P = 1.1e-236
Identities = 436/708 (61%), Positives = 553/708 (78%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G+ +
Sbjct: 326 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE-EPAAP 384
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P ++++K E +Q R++LP++P+R+ELL AV +Q+L+I GETGSGKTTQIPQYL
Sbjct: 385 PAPTQAQQK---ESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLF 441
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT++G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 442 EEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 501
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 502 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 561
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 562 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 621
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 682 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 741
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 742 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 801
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 802 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 862 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 920
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 921 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 979
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 980 LFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1027
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 2282 (808.4 bits), Expect = 1.1e-236, P = 1.1e-236
Identities = 436/708 (61%), Positives = 553/708 (78%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G+ +
Sbjct: 326 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE-EPAAP 384
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P ++++K E +Q R++LP++P+R+ELL AV +Q+L+I GETGSGKTTQIPQYL
Sbjct: 385 PAPTQAQQK---ESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLF 441
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT++G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 442 EEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 501
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 502 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 561
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 562 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 621
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 682 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 741
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP
Sbjct: 742 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 801
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
GELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 802 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 862 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 920
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 921 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 979
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 980 LFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1027
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 2206 (781.6 bits), Expect = 2.6e-230, Sum P(2) = 2.6e-230
Identities = 438/754 (58%), Positives = 559/754 (74%)
Query: 12 KSLQYRIPDAYDEEGHVNQEKRF----AVSLQ---RYNLDSAGDKMNPFAEQEAWEEHQM 64
K L+Y A+ + G V + KR+ A + Q +Y D D P + WEE Q+
Sbjct: 247 KVLEYT--KAHGKAGDVMKMKRYHLPDASTKQIPSQYVEDDEED-FRPGGDGAKWEEEQL 303
Query: 65 GKASLKYGSKN-KNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEML 123
+ L G+K+ K + ++E + ++K+DFI+ + G N + + +E K+K ++E
Sbjct: 304 MASMLHLGAKDAKRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEA---EKKKMSIE-- 358
Query: 124 QEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQ 182
E RK+LP+Y +RD ++AV E+QVL+I GETGSGKTTQ+PQYL+EAG+ + GK +GCTQ
Sbjct: 359 -ETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQ 417
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P E+G KLG +VGYSIRFEDCTSEKT+LKYMTDGMLLRE L+EP+L
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLA 477
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
SYSV+M+DEAHERTL TDILFGL+KD+ +FR DLKLLISSATLDAEKFS +F APIF+I
Sbjct: 478 SYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRI 537
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKHR 361
PGRR+PV+I+YT+APEADY+DAAIVT++QIH+TQ PGDILVFLTGQEEIET E L R
Sbjct: 538 PGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMER 597
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
++ LGSKI ELI P+YANLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVID
Sbjct: 598 SKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVID 657
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGFSK S++ R+G+E L V ISKA+A QRAGR+GRTGPGKCFRLYT Y ++++
Sbjct: 658 PGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQP 717
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKV 541
+PEIQRTNL NVVL+LKSLGI DLV+FDF+DPPP GELTK+
Sbjct: 718 IPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
GRRMAEFP DP +SKMI+AS+K +CS+EI+TIAAMLS ++FYRPK + +HAD+AR F
Sbjct: 778 GRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGF 837
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
GDHI L+ VYN W+E ++S +WC ENY+Q R+MKRARD+RDQL GLLERVEIE
Sbjct: 838 W-SPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETK 896
Query: 662 SNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHEL 721
S+ D I+KAIT+G+F + +KL G Y TVKH H HP+S L + PRWVVY EL
Sbjct: 897 SS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFEL 955
Query: 722 VLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
V T+KE+MR+++E++ WL+E+APHYY+ +++ED
Sbjct: 956 VFTSKEFMREMSEIESGWLLEVAPHYYKGRELED 989
Score = 39 (18.8 bits), Expect = 2.6e-230, Sum P(2) = 2.6e-230
Identities = 18/85 (21%), Positives = 31/85 (36%)
Query: 4 DYDCCNNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
D C V +L + A D + F +S + S D++ ++A Q
Sbjct: 19 DRSICQYVHALAKKAKSAPDLVEKLRDAGDFPISPA---IQSFADQLMSRMPRQATSARQ 75
Query: 64 MGKASLKYGSKNKNQSNDYEYVFED 88
G + + + N+ N V ED
Sbjct: 76 RGPTTAELAEQELNRLNRAVGVLED 100
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 2206 (781.6 bits), Expect = 2.6e-230, Sum P(2) = 2.6e-230
Identities = 438/754 (58%), Positives = 559/754 (74%)
Query: 12 KSLQYRIPDAYDEEGHVNQEKRF----AVSLQ---RYNLDSAGDKMNPFAEQEAWEEHQM 64
K L+Y A+ + G V + KR+ A + Q +Y D D P + WEE Q+
Sbjct: 247 KVLEYT--KAHGKAGDVMKMKRYHLPDASTKQIPSQYVEDDEED-FRPGGDGAKWEEEQL 303
Query: 65 GKASLKYGSKN-KNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEML 123
+ L G+K+ K + ++E + ++K+DFI+ + G N + + +E K+K ++E
Sbjct: 304 MASMLHLGAKDAKRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEA---EKKKMSIE-- 358
Query: 124 QEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQ 182
E RK+LP+Y +RD ++AV E+QVL+I GETGSGKTTQ+PQYL+EAG+ + GK +GCTQ
Sbjct: 359 -ETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQ 417
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P E+G KLG +VGYSIRFEDCTSEKT+LKYMTDGMLLRE L+EP+L
Sbjct: 418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLA 477
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
SYSV+M+DEAHERTL TDILFGL+KD+ +FR DLKLLISSATLDAEKFS +F APIF+I
Sbjct: 478 SYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRI 537
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKHR 361
PGRR+PV+I+YT+APEADY+DAAIVT++QIH+TQ PGDILVFLTGQEEIET E L R
Sbjct: 538 PGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMER 597
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
++ LGSKI ELI P+YANLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVID
Sbjct: 598 SKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVID 657
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGFSK S++ R+G+E L V ISKA+A QRAGR+GRTGPGKCFRLYT Y ++++
Sbjct: 658 PGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQP 717
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKV 541
+PEIQRTNL NVVL+LKSLGI DLV+FDF+DPPP GELTK+
Sbjct: 718 IPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
GRRMAEFP DP +SKMI+AS+K +CS+EI+TIAAMLS ++FYRPK + +HAD+AR F
Sbjct: 778 GRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGF 837
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
GDHI L+ VYN W+E ++S +WC ENY+Q R+MKRARD+RDQL GLLERVEIE
Sbjct: 838 W-SPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETK 896
Query: 662 SNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHEL 721
S+ D I+KAIT+G+F + +KL G Y TVKH H HP+S L + PRWVVY EL
Sbjct: 897 SS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFEL 955
Query: 722 VLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
V T+KE+MR+++E++ WL+E+APHYY+ +++ED
Sbjct: 956 VFTSKEFMREMSEIESGWLLEVAPHYYKGRELED 989
Score = 39 (18.8 bits), Expect = 2.6e-230, Sum P(2) = 2.6e-230
Identities = 18/85 (21%), Positives = 31/85 (36%)
Query: 4 DYDCCNNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
D C V +L + A D + F +S + S D++ ++A Q
Sbjct: 19 DRSICQYVHALAKKAKSAPDLVEKLRDAGDFPISPA---IQSFADQLMSRMPRQATSARQ 75
Query: 64 MGKASLKYGSKNKNQSNDYEYVFED 88
G + + + N+ N V ED
Sbjct: 76 RGPTTAELAEQELNRLNRAVGVLED 100
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 2193 (777.0 bits), Expect = 3.0e-227, P = 3.0e-227
Identities = 429/751 (57%), Positives = 555/751 (73%)
Query: 16 YRIPDAY-DEEGHVNQEKRFAVSLQRY-NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGS 73
Y +P+ Y E+G ++++K+ +RY D G + E E WE Q KA +
Sbjct: 361 YMMPEDYITEKGKIDRKKKEDALYKRYVERDELGQEKF-ITEHEEWEMEQTAKAKAQINR 419
Query: 74 KNKNQSNDYEYVFED--KIDFIRDSVIDGENL-----DELHSELPDKSKEKSALEMLQEE 126
DYEYVF+D +I+F D+ + G + E D++++K+ + +++
Sbjct: 420 AEFVDEGDYEYVFDDTQRINFTMDAQMKGTRKLMTQEQRMLQEKLDQAEQKA--QTIEDT 477
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG-KVGCTQPXX 185
RK LPIY +RD+++QAV+++QVL+IVGETGSGKTTQ+PQYLHEAGYTK G KVGCTQP
Sbjct: 478 RKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRR 537
Query: 186 XXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYS 245
+EMGVKLG+EVGYSIRFED TS+KT+LKYMTDGMLLRE+L+EP+L YS
Sbjct: 538 VAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYS 597
Query: 246 VLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 305
LM+DEAHERT+ TDI GLLKD+ K R DLKLLISSAT+DA+KF YF +APIF IPGR
Sbjct: 598 ALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGR 657
Query: 306 RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGL 365
Y V+IHYT+ PEA+Y+ AAI TV QIHV+Q PGDILVFLTGQEEIE A++ L+ R L
Sbjct: 658 MYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKL 717
Query: 366 GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFS 425
G+KI E+IICPIYANLP++LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVIDPGF
Sbjct: 718 GNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFV 777
Query: 426 KVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEI 485
K +NPRTGMESL+V P S+ASA QRAGR+GR GPGKCFRLYT Y+ +++++T PEI
Sbjct: 778 KENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEI 837
Query: 486 QRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
QRTNL++V+L+LKSLGID L+ FDF+DPPP GELTK+GR+M
Sbjct: 838 QRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQM 897
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
AEFP DPML+K I+A+DK C +E+++I +ML +++F+RPKDK++HAD+AR F + +
Sbjct: 898 AEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTVKD 957
Query: 606 VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS-NL 664
GDH+ LL ++N W + ++S W EN++Q RS+ RARD+RDQL L +RVE+ V+S
Sbjct: 958 GGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSCGS 1017
Query: 665 NDLDAIKKAITSGFFPHSAKLQKNG-SYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVL 723
N++ I+KAIT+GFFP++A+LQ+ G SY T+K Q V++HPSS L +V PRWV+Y ELVL
Sbjct: 1018 NNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPRWVIYFELVL 1077
Query: 724 TTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
T+KEYMR L+ EWLVE+APHYY+ KD+E
Sbjct: 1078 TSKEYMRSNMPLQAEWLVEVAPHYYKKKDLE 1108
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 2131 (755.2 bits), Expect = 1.1e-220, P = 1.1e-220
Identities = 417/754 (55%), Positives = 555/754 (73%)
Query: 12 KSLQYRIPDAY-DEEGHVNQEKRFAVSLQRYNLDSAGDKMNPF---AEQEAWEEHQMGKA 67
++ +Y++P+ Y E+G ++++++ V QRY + G++ AEQ+ WE Q+ KA
Sbjct: 298 QATEYQMPEDYFTEQGKLDRKRKEEVLYQRYKDSNEGEQNEVTMGAAEQQRWEAQQINKA 357
Query: 68 SL-KYGSKNKNQSNDYEYVFED--KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQ 124
L +++VF++ +IDF+ D+ + EN + ++ D EKS L+
Sbjct: 358 LLFDQNEWLPPGEKQFDFVFDESQQIDFLLDTKLSAENPVDT-DKMTDVKVEKS----LE 412
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQP 183
RK+LP+Y Y+D+LL+A+NEYQVL+IV ETGSGKTTQ+PQ+LHEAGYTK K + CTQP
Sbjct: 413 SSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQP 472
Query: 184 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLES 243
+EM V+LG EVGYSIRFE+ TSEKT++KY+TDGMLLRE L+EP+L S
Sbjct: 473 RRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLAS 532
Query: 244 YSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIP 303
YSV+++DEAHERTL TDILFGL+KD+ +FR DLK+LISSAT+DAEKFS YF AP+F +P
Sbjct: 533 YSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVP 592
Query: 304 GRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTR 363
GRRYPV+I+YT PEA+YI AAI T+LQIH TQ GDILVFLTGQ+EIE E ++ R
Sbjct: 593 GRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCR 652
Query: 364 GLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPG 423
LG +I E+I+CPIYANLP+ELQAKIF+PTP GARKVVLATNIAETS+TIDG+ +VID G
Sbjct: 653 ILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSG 712
Query: 424 FSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
F K YNPRTGMESL+ P S+ASA QRAGR+GR GPGKCFRLYT Y+ ++D T P
Sbjct: 713 FVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSP 772
Query: 484 EIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGR 543
EIQRTNL N+VL+LKSLGI++L++FDF+D PP GELTK+GR
Sbjct: 773 EIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGR 832
Query: 544 RMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL 603
+MAEFP DPMLSK ++AS K C +E+++I +ML +S+FYRPKDK + AD AR NF
Sbjct: 833 QMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQ 892
Query: 604 GNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSN 663
GDH+ LL ++N W + ++S W EN++Q +S+ RARD+RDQL L ERVEIE+ +N
Sbjct: 893 PG-GDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTN 951
Query: 664 LND-LDAIKKAITSGFFPHSAKLQKNG-SYWTVKHPQRVHIHPSSGLAQVLPRWVVYHEL 721
++ LD IKKAIT+G+F ++A+L ++G SY TVK Q V+IHPSS +A+ P+ ++Y EL
Sbjct: 952 SSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFEL 1011
Query: 722 VLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
VLTTKEY RQ+TE++PEWL+EI+PHY++ +++E+
Sbjct: 1012 VLTTKEYCRQITEIQPEWLLEISPHYFKPENIEE 1045
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 2121 (751.7 bits), Expect = 1.3e-219, P = 1.3e-219
Identities = 420/752 (55%), Positives = 549/752 (73%)
Query: 16 YRIPDAY-DEEGHVNQEKRFAVSLQRY-NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGS 73
Y +P+ Y E+G ++++K+ +RY D G + E E WE Q KA +
Sbjct: 254 YYMPEDYITEKGKIDRKKKEDALYKRYVEKDEYGQEKF-VTEHEEWEREQAAKAKAQIKV 312
Query: 74 KNKNQSNDYEYVF-EDK-IDFIRDSVIDGENL----DELHSELPDKSKEKSALEMLQEER 127
++++ Y+YV ED+ I + RD+ + GE ++L+ + + EK L M QE R
Sbjct: 313 AERDEAG-YDYVMDEDQYIQWTRDTRLPGEGKVLTGEQLYLQAQIDAAEKRQLSM-QETR 370
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG-KVGCTQPXXX 186
K+LPIY YRDE L A+ +YQ+LVIVGETGSGKTTQ+PQYLHEAGYTK G +VGCTQP
Sbjct: 371 KSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQPRRV 430
Query: 187 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
EMGVK+G+EVGYSIRFED TS+KTILKYMTDGMLLRE ++EP+L SYS
Sbjct: 431 AAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTEPDLSSYSA 490
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
LM+DEAHERT+ TDIL L+KDL + R DLKLLISSAT++AEKF+ YF APIF IPGRR
Sbjct: 491 LMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRR 550
Query: 307 YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG 366
YPV+I+YT APEA+Y+ AAI TV QIH TQ GDIL+FLTGQ+EIE A+ + R LG
Sbjct: 551 YPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLG 610
Query: 367 SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSK 426
S++ EL+ICPIYANLP+ELQ+KIFEPTPE ARKVVLATNIAETSLTIDGI YVIDPG+ K
Sbjct: 611 SRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVK 670
Query: 427 VKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQ 486
YNP TGM +L+V P S+ASA QR+GR+GR GPGKCFRLYT + Y +M+++T PEIQ
Sbjct: 671 ENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQ 730
Query: 487 RTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMA 546
RTNL VVL LKSLGI++L++F+F+DPPP GELTK+GR+MA
Sbjct: 731 RTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHKGELTKLGRQMA 790
Query: 547 EFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV 606
EFP DPML+K ++A+DK+ C +E+++I AMLS +++F+RPKDKQVHAD AR F +
Sbjct: 791 EFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTVKEG 850
Query: 607 GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS--NL 664
GDH+ LL ++N W + +YS W EN++Q RS+ RARD+R+QL L ERVE+ +++ +
Sbjct: 851 GDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTCGGI 910
Query: 665 NDLDAIKKAITSGFFPHSAKLQKNG-SYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHEL 721
+++ IK+AIT+GFFP++A++Q++G SY TVK+ V+IHPSS + Q PR V+Y+EL
Sbjct: 911 SNMPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPPPRMVIYYEL 970
Query: 722 VLTTKEYMRQVTELKPEWLVEIAPHYYQLKDV 753
V TTKEYMR ++P+WL E+APH+++ KD+
Sbjct: 971 VQTTKEYMRSCMPIEPKWLAELAPHFHKAKDI 1002
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1917 (679.9 bits), Expect = 4.0e-201, Sum P(2) = 4.0e-201
Identities = 357/636 (56%), Positives = 480/636 (75%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
K+ ++E+R++LPI+P R+ LQAV+E+Q+LV++GETGSGKTTQ+ QYL EAGY +G
Sbjct: 495 KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
K+GCTQP +E G +LG EVGY+IRFEDCTS +TI+K+MTDG+LLRE L
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+PNL +YSV+++DEAHERT+STD+LFGLLK ++ R +LK+LI+SATL+AEKFS YF +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
A +F IPGR +PV+I YTK PEADY+DA+++TV+QIH+++ PGDIL+FLTGQEEI+ A +
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
IL R + LGS + +LII P+Y+ LP+E+Q KIFEP P G+RKVV+ATNIAETSLTIDGI
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGI 794
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YVIDPGFSK K +NP+ GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT + +
Sbjct: 795 YYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNE 854
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
M +++PEIQRTNL N VL +K++GI+DL+NFDF+DPPP G
Sbjct: 855 MLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEG 914
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
LT++GR+MAEFPLDP LSKM++AS CSDEI+T+ AMLSV N +FYRPK+KQ AD
Sbjct: 915 LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQ 973
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ F GDH+ LL VY SW+ +S WC+EN++Q RS++RA+D+R QL +++R
Sbjct: 974 KKAKFFQPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRY 1032
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
++++ S + I+KAI SGFF +++K N Y T+ Q V+IHPSS L P WV
Sbjct: 1033 KLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWV 1092
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
+YHELV+TTKEYMR+V + P+WLVE+AP +++ D
Sbjct: 1093 IYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
Score = 52 (23.4 bits), Expect = 4.0e-201, Sum P(2) = 4.0e-201
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQY--LHEA 170
+ K + EM+ K L + P+ D + +A + I G G T+IP++ + +
Sbjct: 430 EEKNQQRNEMMDSIPKDLSL-PWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQG 488
Query: 171 GYTKQGK 177
+ + GK
Sbjct: 489 SHIQYGK 495
Score = 48 (22.0 bits), Expect = 1.1e-200, Sum P(2) = 1.1e-200
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 51 NPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSEL 110
N + E E WEE ++ S ++ KNQ +K+++ + ++D DE E
Sbjct: 109 NNYKESE-WEETKLNSNS---NNQKKNQFPGLS--IPNKVEWDQGKIVDVPIDDEKTKEE 162
Query: 111 PDKSKEKSALEMLQEERK 128
+ ++ E +E+R+
Sbjct: 163 LKRKQQDMDREFEREQRE 180
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1920 (680.9 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 364/637 (57%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 552 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 610
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 611 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 670
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 671 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 730
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 731 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 791 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 850
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 851 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 910
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 911 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 971 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1029
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1030 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1088
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1089 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1148
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1149 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
Score = 41 (19.5 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 524 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 555
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1920 (680.9 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 364/637 (57%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 576 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 634
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 635 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 694
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 695 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 754
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 755 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 814
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 815 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 874
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 875 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 934
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 935 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 994
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 995 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1053
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1054 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1112
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1113 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1172
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1173 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
Score = 41 (19.5 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 548 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 579
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1920 (680.9 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 364/637 (57%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 521 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 579
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 580 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 639
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 640 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 699
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 700 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 759
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 760 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 819
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 820 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 879
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 880 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 939
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 940 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 998
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 999 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1057
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1058 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1117
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1118 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1154
Score = 41 (19.5 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 493 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 524
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1920 (680.9 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 364/637 (57%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 574 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 632
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 633 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 692
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 693 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 752
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 753 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 812
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 813 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 872
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 873 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 932
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 933 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 992
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 993 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1051
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1052 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1110
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1111 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1170
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1171 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1207
Score = 41 (19.5 bits), Expect = 2.8e-200, Sum P(2) = 2.8e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 546 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 577
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1918 (680.2 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 363/637 (56%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + ++ E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 562 KKTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 620
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 621 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 680
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 681 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 740
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 741 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 800
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 801 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 860
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 861 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 920
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 921 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 980
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 981 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1039
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1040 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1098
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1099 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1158
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1159 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1195
Score = 41 (19.5 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 534 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 565
Score = 39 (18.8 bits), Expect = 7.4e-200, Sum P(2) = 7.4e-200
Identities = 15/71 (21%), Positives = 33/71 (46%)
Query: 11 VKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLK 70
+K L+ +P A +E H + E R ++ + D+ E+E +H+ S
Sbjct: 158 LKELEALMPSAAGQEKHRDTEHRDKAKKKKRSRSRERDRDRE-RERERDRDHKRRHRSR- 215
Query: 71 YGSKNKNQSND 81
S++++++ D
Sbjct: 216 --SRSRSRTRD 224
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1918 (680.2 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 363/637 (56%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + ++ E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 544 KKTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 602
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 603 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 662
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 663 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 722
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 723 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 782
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 783 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 842
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 843 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 902
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 903 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 962
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 963 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1021
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1022 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1080
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1081 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1140
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1141 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1177
Score = 41 (19.5 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 516 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 547
Score = 39 (18.8 bits), Expect = 7.4e-200, Sum P(2) = 7.4e-200
Identities = 21/103 (20%), Positives = 43/103 (41%)
Query: 11 VKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEH-------- 62
+K L+ +P A +E H + E R ++ + + D+ +++ H
Sbjct: 146 LKELEALMPSAAGQERHRDTEHRDKTKKKKRSRERDRDRDRE-RDRDHKRRHRSRSRSRT 204
Query: 63 -QMGKASLKYGSKNKNQS-----NDYEYVFEDKIDFIRDSVID 99
+ K +Y S++++QS D + E +D RD +D
Sbjct: 205 RERNKGKSRYRSRSRSQSPPRDRKDRDKYGERNLDRWRDKHVD 247
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1918 (680.2 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 363/637 (56%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + ++ E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 548 KKTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 606
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 607 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 666
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 667 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 726
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 727 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 786
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 787 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 846
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 847 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 906
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 907 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 966
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 967 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1025
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1026 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1084
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1085 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1144
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1145 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1181
Score = 41 (19.5 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 520 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 551
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1918 (680.2 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 364/637 (57%), Positives = 474/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ L +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 542 KKTQLSIL-EQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTR 600
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 601 GKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 660
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R+D+KL+++SATLDA KFS YF
Sbjct: 661 LIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFY 720
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVE+ YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 721 EAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 780
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 781 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 840
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 841 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 900
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 901 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 960
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 961 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1019
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1020 QKKAKFHQPE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1078
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1079 HKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1138
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1139 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1175
Score = 41 (19.5 bits), Expect = 4.5e-200, Sum P(2) = 4.5e-200
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 514 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 545
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1914 (678.8 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 363/637 (56%), Positives = 473/637 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ L ++ E+R++LPI+ +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 500 KKTQLSII-EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 558
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 559 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 618
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 619 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 678
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 679 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 738
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 739 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 798
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 799 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 858
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 859 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 918
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 919 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 977
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 978 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1036
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1037 HKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1096
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1097 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1133
Score = 41 (19.5 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 472 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 503
Score = 37 (18.1 bits), Expect = 3.2e-199, Sum P(2) = 3.2e-199
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 72 GSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTL 130
GSK D + + ++ R + GE +E PD+ S + + E TL
Sbjct: 308 GSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTL 366
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1900 (673.9 bits), Expect = 3.4e-196, P = 3.4e-196
Identities = 361/630 (57%), Positives = 468/630 (74%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
L E+R++LPIY RD+L++AV + Q+L+++GETGSGKTTQI QYL E G+T +GK+GCTQ
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQ 638
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E G +LG EVGY+IRFEDCTS +TI+KYMTDGMLLRE L E L+
Sbjct: 639 PRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELK 698
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
SYSV+M+DEAHERT+ TD+LFGLLK ++ R +LKL+++SATLDA KFS YF APIF I
Sbjct: 699 SYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTI 758
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PGR +PVE+ YTK PE DY+DA+++TV+QIH+ + PGDIL+FLTGQEEI+TA EIL R
Sbjct: 759 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERM 818
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DP
Sbjct: 819 KSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDP 878
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF K K YN +TGM+SL+V PIS+A+A QRAGR+GRTGPGK +RLYT Y +M V
Sbjct: 879 GFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPV 938
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 542
PEIQRTNLA VL LK++GI+DL++FDF+D PP G LT++G
Sbjct: 939 PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLG 998
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
RRMAEFPL+P LSKM++ S +CSDEI+TI +MLSV N +FYRPKDKQ AD + F+
Sbjct: 999 RRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN-VFYRPKDKQALADQKKAKFN 1057
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
GDH+ LL VYNSW+ +S WCYEN++Q+R++KR++D+R QL G+++R +++V S
Sbjct: 1058 QAE-GDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVS 1116
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+ I+KAI SGFF ++AK Y T+ Q V+IHPSS L P WV+YHELV
Sbjct: 1117 AGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 1176
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
TTKEYMR+VT + P+WLVE AP +++ D
Sbjct: 1177 QTTKEYMREVTTIDPKWLVEFAPSFFRFSD 1206
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1876 (665.4 bits), Expect = 6.0e-196, Sum P(2) = 6.0e-196
Identities = 356/636 (55%), Positives = 474/636 (74%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
++ L M+ E+R++LPI+ + L++A+ + Q+LV+VGETGSGKTTQ+ QY EAG ++G
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
K+GCTQP +E G KLG +VGY+IRFEDCTS+ TI+KYMTDGMLLRE L
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+P+L YS++M+DEAHERT+ TD+LFGLLK + R +LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
APIF IPGR +PVEI YT+ PE+DY++AA +TV+QIH+T+ PGD+LVFLTGQEEI+T+ E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
+L R + +G + ELII P+Y LP+E+Q +IF+P P G RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YV+DPGF K K YNP++GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT + +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
M VPEIQRTNLA+ +L LK++GI++L++FDF+D PP G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
LTK+GRRMAEFPL+P LSK+++ S CS+E++TI AML+V N IFYRPK+KQ HAD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ FH GDH+ LL VYNSW+ ++S WC+EN+IQVRSMKRA+DIR QL G+++R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
++ + S D+ ++KAI SGFF ++AK Y T+ Q V+IHPSS Q P WV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VYHELV+TTKEYMR+VT + P+WLVE AP ++++ D
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
Score = 44 (20.5 bits), Expect = 6.0e-196, Sum P(2) = 6.0e-196
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 41 YNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSK 74
++ D + D+ N E W +H YG +
Sbjct: 495 WSADESKDRNNKMKEMPEWLKHVTAGGKATYGRR 528
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1876 (665.4 bits), Expect = 6.0e-196, Sum P(2) = 6.0e-196
Identities = 356/636 (55%), Positives = 474/636 (74%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
++ L M+ E+R++LPI+ + L++A+ + Q+LV+VGETGSGKTTQ+ QY EAG ++G
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
K+GCTQP +E G KLG +VGY+IRFEDCTS+ TI+KYMTDGMLLRE L
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+P+L YS++M+DEAHERT+ TD+LFGLLK + R +LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
APIF IPGR +PVEI YT+ PE+DY++AA +TV+QIH+T+ PGD+LVFLTGQEEI+T+ E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
+L R + +G + ELII P+Y LP+E+Q +IF+P P G RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YV+DPGF K K YNP++GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT + +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
M VPEIQRTNLA+ +L LK++GI++L++FDF+D PP G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
LTK+GRRMAEFPL+P LSK+++ S CS+E++TI AML+V N IFYRPK+KQ HAD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ FH GDH+ LL VYNSW+ ++S WC+EN+IQVRSMKRA+DIR QL G+++R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
++ + S D+ ++KAI SGFF ++AK Y T+ Q V+IHPSS Q P WV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VYHELV+TTKEYMR+VT + P+WLVE AP ++++ D
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
Score = 44 (20.5 bits), Expect = 6.0e-196, Sum P(2) = 6.0e-196
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 41 YNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSK 74
++ D + D+ N E W +H YG +
Sbjct: 495 WSADESKDRNNKMKEMPEWLKHVTAGGKATYGRR 528
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 357/637 (56%), Positives = 471/637 (73%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
++S L +QE+R++LPIY + EL+QAV++ QVLV++GETGSGKTTQ+ QYL EAGYT +
Sbjct: 502 QRSKLS-IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTK 560
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G +LG EVGY+IRFEDCT T++KYMTDGMLLREI
Sbjct: 561 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 620
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L + NL YSV+M+DEAHERT+ TD+LFGLLK L+K R DL+L+++SATLDAEKFS YF
Sbjct: 621 LIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFF 680
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
+ IF IPGR +PVEI YTK PE DY+DAA++TVLQIH+T+ GDILVFLTGQEEI++A
Sbjct: 681 NCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSAC 740
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
+ L R +GLG + ELII P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDG
Sbjct: 741 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDG 800
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF+K YNP+ G+ESL++ PIS+ASA QRAGR+GRTGPGKC+RLYT Y
Sbjct: 801 IYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 860
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M ++PEIQR NL L +K++GI+DL++FDF+DPP
Sbjct: 861 EMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEE 920
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LTK+GR+MAEFPL+P LSKM++AS CSDEI+T+ AM+ GN IFYRP++KQ AD
Sbjct: 921 GLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQAD 979
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
R F GDH+ LL VY +W+ N+S WC+EN+IQ RS++RA+D+R QL ++++
Sbjct: 980 QKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDK 1038
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V + + I+KAIT+GFF H A+ Y T+ Q V+IHPSS L Q P W
Sbjct: 1039 YKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1098
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
V+YH+LV+TTKEYMR+VT + P+WLVE+AP ++++ D
Sbjct: 1099 VIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1823 (646.8 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 331/628 (52%), Positives = 470/628 (74%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
++++R++LP++ +R++L++AV E Q++++VGETGSGKTTQ+ QYL EAG+ +G +GCTQ
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQ 594
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E+G +LG EVGY+IRFEDCTS T +KYMTDGML REI+ +P+L+
Sbjct: 595 PRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLK 654
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YSV+M+DEAHERT++TD+LF LLK + R DLK++++SATLDA+KFS YF PIF I
Sbjct: 655 RYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTI 714
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PGR +PVEI Y+K PE+DY+DAA+ TV+QIH+ + PGDIL+FLTGQEEI+T+ EIL R
Sbjct: 715 PGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERM 774
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ LG + ELII P+Y+ LP E+Q++IF+P P G+RKVV+ATNIAETS+TID I YV+DP
Sbjct: 775 KALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDP 834
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF K +Y+P+ GM+SL+V PIS+A A QRAGR+GRTGPGKCFRLYT Y +M ++
Sbjct: 835 GFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSI 894
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 542
PEIQR NL+N +L+LK++GI+DL++FDF+DPPP G LT++G
Sbjct: 895 PEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLG 954
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
R+MA+FP++P LSK+++AS + +CSDE+++I AML++ N +FYRPK+KQ AD + FH
Sbjct: 955 RKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPN-VFYRPKEKQTQADAKKAKFH 1013
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
N GDH+ LL VYN+W++ YS WC EN+IQ R++ RARD+R+Q+E +++R + +V S
Sbjct: 1014 DPN-GDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMS 1072
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+D + +++A+ SGFF ++A+ + Y T+ V++HPSS L WV+YH LV
Sbjct: 1073 CGSDTNRVRQALCSGFFRNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAEWVIYHTLV 1132
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQL 750
LTTKEYM T ++P+WLV+ AP ++++
Sbjct: 1133 LTTKEYMHCTTSIEPKWLVDAAPTFFKV 1160
Score = 40 (19.1 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 15/68 (22%), Positives = 25/68 (36%)
Query: 57 EAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKE 116
E WE QM + + S DY + + +D E DE L ++K+
Sbjct: 368 ERWEIRQMIASGVAKASDYPELEEDYNNALSGEGQMELEEDVDIEIRDEEPPFLAGQTKQ 427
Query: 117 KSALEMLQ 124
L ++
Sbjct: 428 SLELSPIR 435
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1818 (645.0 bits), Expect = 1.7e-187, P = 1.7e-187
Identities = 332/628 (52%), Positives = 468/628 (74%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
++++R++LP+Y +R +LL+AV E Q+L++VG+TGSGKTTQ+ QYL EAG+ +G +GCTQ
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQ 629
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E+G KLG EVGY+IRFEDCTS +T +KYMTDGML RE+L +P+L+
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YSV+M+DEAHERT++TD+LFGLLK +K R DL+L+++SATLDA+KFS+YF PIF I
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PGR +PVEI Y+K PE+DY+DAA++TV+QIH+T+ PGD+L+FLTGQEEI+TA EIL R
Sbjct: 750 PGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERM 809
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ LG + EL+I P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAETS+TID I YVIDP
Sbjct: 810 KALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDP 869
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF K K+Y+P+ GM+SL+V PIS+A A QRAGR+GRTGPGKCFRLYT Y +M T+
Sbjct: 870 GFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTI 929
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 542
P+IQR NL++ +L+LK++GI+DL++FDF+DPPP G LT++G
Sbjct: 930 PDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLG 989
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
R+MA+FP++P L+K+++AS CS+E+++I AMLS+ S+FYRPK+KQ AD + FH
Sbjct: 990 RKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSI-QSVFYRPKEKQQQADQKKAKFH 1048
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
+ GDH+ LL VYN+W+ +S WCYEN+IQ R ++RA+D+R QL G+++R ++ S
Sbjct: 1049 DPH-GDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVS 1107
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+ +++A+ +GFF +SA+ Y T+ V++HPSS + V+YH LV
Sbjct: 1108 CGRNTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSAMFGKPAEHVIYHTLV 1167
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQL 750
LTTKEYM T ++P+WLVE AP ++++
Sbjct: 1168 LTTKEYMHCTTGIEPKWLVEAAPTFFKV 1195
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1768 (627.4 bits), Expect = 1.4e-185, Sum P(2) = 1.4e-185
Identities = 335/636 (52%), Positives = 455/636 (71%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK----V 178
+QE+R+ LP+Y R +LL+A+ + Q +VIVGETGSGKTTQI QY++E G K G +
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLI 388
Query: 179 GCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSE 238
GCTQP +E+G KLG VGY+IRFED TSE T++KYMTDGML RE L++
Sbjct: 389 GCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALND 448
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
PN+ YSV+M+DEAHERT++TD+LF LLK+ K +LK++++SATLD+ KFS YF + P
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCP 508
Query: 299 IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
I IPGR +PVE+ YTKAPE DY+ AA+ +V+QIHV++ GDILVFLTGQEEIET+ E L
Sbjct: 509 IITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEAL 568
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
R + LG I ELII P+Y+ LP+E+Q +IFEPTP G+RKV+LATNIAETS+TIDGI Y
Sbjct: 569 HERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYY 628
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+DPGF K+ Y+ + GM+SL V PISKA A QR+GR+GRTGPGKC+RLYT Y K+M
Sbjct: 629 VVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMI 688
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGEL 538
NT+PEIQR NL++ +L+LK++GI DLVNF+F+DPP G L
Sbjct: 689 PNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNL 748
Query: 539 TKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNAR 598
T +GR+MA+ P++P L+K ++ S + +C++EI++I AMLSV +IFYRPKDKQ AD +
Sbjct: 749 TTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSV-QTIFYRPKDKQALADQRK 807
Query: 599 MNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI 658
FH ++GDH+ LL V+ SW NYS WC +N+IQ RSM+RA ++R QL+ +++R
Sbjct: 808 SRFH-HSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGY 866
Query: 659 EVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVY 718
+ S ND+D +++ SG+F +SAK Q+ Y T+ V++HPSS L P++V+Y
Sbjct: 867 KTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYLHPSSSLYGKKPQYVIY 926
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
H L+LT+KEYM V+ + P WL E+AP Y++ D +
Sbjct: 927 HTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAK 962
Score = 54 (24.1 bits), Expect = 1.4e-185, Sum P(2) = 1.4e-185
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 23 DEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK---NQS 79
D + H N R ++S++ N ++ ++ P ++ ++E Q + K S + Q
Sbjct: 132 DIQTHAN---RISLSMRGINQNTGHEE--PIPQRGRYQERQP-RPKRKLTSPERWEIRQL 185
Query: 80 NDYEYVFED---KIDFIRDSVIDGENLDELHSELPDKSKE-KSALEMLQEERKTLPI 132
V D ++D D+ + E D LH EL DK + +++ ++ +T PI
Sbjct: 186 ISSGAVSADDYPELDQEEDTQTESEKTDNLHIELNDKKPDFLKGVKVTKDFPETTPI 242
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1767 (627.1 bits), Expect = 4.2e-184, Sum P(2) = 4.2e-184
Identities = 337/593 (56%), Positives = 440/593 (74%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 552 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 610
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 611 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 670
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 671 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 730
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 731 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 791 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 850
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 851 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 910
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP
Sbjct: 911 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 971 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1029
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1030 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1088
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L
Sbjct: 1089 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSAL 1141
Score = 41 (19.5 bits), Expect = 4.2e-184, Sum P(2) = 4.2e-184
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 524 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 555
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1763 (625.7 bits), Expect = 1.1e-181, P = 1.1e-181
Identities = 326/632 (51%), Positives = 453/632 (71%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+ +R+TLP+Y R EL+QAV + Q LVIVGETGSGKTTQI QYL E G++ G +GCTQ
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQ 535
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E+G K+GH+VGY+IRFED T T +KYMTDGML RE L +P +
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YSV+M+DEAHERT++TD+LF LLK R +LK++++SATL++ KFS+YF + PI I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PG+ +PVE+ Y++ P+ DYI+AA+ V+ IH+ + PGDILVFLTGQEEI++ EIL R
Sbjct: 656 PGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ LG I EL+I P+Y+ LP+E+Q+KIFEPTP+G+RKVV ATNIAETS+TIDGI YV+DP
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF+K+ YN R G+E L+V PIS+A A QR GR+GRTGPGKC+RLYT ++ +M +NTV
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 542
PEIQR NL++ +L+LK++GI+DL+ FDF+DPPP G+LT +G
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLG 895
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
+ M+ FP+DP LS+ +++S ++CSDEI+TI +MLSV N +FYRPKD+Q+ AD+ + FH
Sbjct: 896 KEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSKKAKFH 954
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
GDH+ LL VY W++ NYS Q+C N++ R +KRARD++ Q+ + +++ +++ S
Sbjct: 955 -HPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLIS 1013
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+D D I+K SGFF ++AK Y T+ V IHPSS L +V+YH +V
Sbjct: 1014 CHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIV 1073
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
LT++EYM QVT ++P+WL+E+APH+Y+ D E
Sbjct: 1074 LTSREYMSQVTSIEPQWLLEVAPHFYKAGDAE 1105
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1761 (625.0 bits), Expect = 1.8e-181, P = 1.8e-181
Identities = 332/510 (65%), Positives = 411/510 (80%)
Query: 246 VLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 305
V+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D +FS +F AP+F+IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 306 RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGL 365
R+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTGQEEIE A E+L+ R R L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 366 GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFS 425
GSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 426 KVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEI 485
K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRLYT Y ++++ TVPEI
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 486 QRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
QRT+L NVVL+LKSLGI DL++FDF+DPPP GELT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
AE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRPKDK VHADNAR+NF L
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG 394
Query: 606 VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLN 665
GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ ++S
Sbjct: 395 -GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 666 DLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTT 725
D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S L + PRW++YHELVLTT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 726 KEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
KE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELED 542
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1761 (625.0 bits), Expect = 1.8e-181, P = 1.8e-181
Identities = 332/510 (65%), Positives = 411/510 (80%)
Query: 246 VLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 305
V+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D +FS +F AP+F+IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 306 RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGL 365
R+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTGQEEIE A E+L+ R R L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 366 GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFS 425
GSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 426 KVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEI 485
K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRLYT Y ++++ TVPEI
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 486 QRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
QRT+L NVVL+LKSLGI DL++FDF+DPPP GELT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
AE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRPKDK VHADNAR+NF L
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG 394
Query: 606 VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLN 665
GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ ++S
Sbjct: 395 -GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 666 DLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTT 725
D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S L + PRW++YHELVLTT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 726 KEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
KE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELED 542
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1720 (610.5 bits), Expect = 1.5e-179, Sum P(2) = 1.5e-179
Identities = 325/671 (48%), Positives = 475/671 (70%)
Query: 88 DKIDFIRDSVIDGENLDELHSEL-PDK----SKEKSALEMLQEERKTLPIYPYRDELLQA 142
++ID V++ + + S L P+K S E S + ++E+R+ LPI+ R++L++
Sbjct: 612 EQIDKETGEVLNYKAQSQFASHLTPNKPTEGSSEFSKTKTIKEQREFLPIFGCRNDLMKI 671
Query: 143 VNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVK 202
+ E V++IVGETGSGKTTQ+ QYL+E GY+K GK+GCTQP +EM V
Sbjct: 672 IRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQPRRVAAVSVAKRVSEEMSVT 731
Query: 203 LGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDIL 262
LG+EVGYSIRFEDCTS +T +KYMTDG+LLRE ++PNL+ YS +++DEAHER+L+TD+L
Sbjct: 732 LGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVL 791
Query: 263 FGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYI 322
FG+LK ++ R D+KL+++SAT+D++KFS +FG P+F IPGR +PV++ ++K P DY+
Sbjct: 792 FGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYV 851
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLP 382
D+A+ +L IHVTQ GDILVF+TGQE+IET ++ R + LG + L + PIY+ LP
Sbjct: 852 DSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLP 911
Query: 383 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVH 442
+++QAKIFE G+RK ++ATNIAETSLT+DGI YVID G+ K+K YNPR GM+SL V
Sbjct: 912 SDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVT 971
Query: 443 PISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGI 502
PISKA+A QR+GR+GRTGPG+C+RLYT + ++ DN +PEIQRTNL NVVL LKS+G+
Sbjct: 972 PISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGV 1031
Query: 503 DDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASD 562
+L++FDF+DPPP G++T +G+RM+EFPLDP LSKM++ ++
Sbjct: 1032 KNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAE 1091
Query: 563 KDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWREC 622
+ C +I+TI +MLS+ S+FYRPK + +D +R F + DH+ LL VY W+
Sbjct: 1092 QLGCGQDIVTIVSMLSMP-SVFYRPKGAEEESDASREKFFVPE-SDHLTLLHVYQQWKIN 1149
Query: 623 NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHS 682
NYS+QWC E+YI +++M++ R++R QL ++ + +++V S ++ D I+KAITS +F HS
Sbjct: 1150 NYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHS 1209
Query: 683 AKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWL 740
AK++ G Y +++ +HP+S L + P ++VYHELV+T+KEYM+ VT + P WL
Sbjct: 1210 AKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWL 1269
Query: 741 VEIAPHYYQLK 751
E+ P ++ +K
Sbjct: 1270 AEMGPMFFSIK 1280
Score = 45 (20.9 bits), Expect = 1.5e-179, Sum P(2) = 1.5e-179
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 24 EEGHVNQEKRFAVSLQRYNLD--SAGDKMNPFAEQ--EAWEEH--QMGKASLKYGSKNKN 77
E+ +EKR L R+N D S D N E + E+H Q+ ++ +N
Sbjct: 144 EKREEQEEKRRKELLDRFNNDDDSNNDNYNDNDESSFKKPEKHYRQIKSTPIRSNDYERN 203
Query: 78 QSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKE 116
S+ ++ + D R S D D+ S D ++
Sbjct: 204 SSSSSSSSYDRRDD--RSSNRDDYRRDDRSSNRDDYRRD 240
Score = 44 (20.5 bits), Expect = 1.9e-179, Sum P(2) = 1.9e-179
Identities = 24/124 (19%), Positives = 46/124 (37%)
Query: 23 DEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMG-KASLKYGSKNKNQSND 81
++E + ++ + Y +D DK+ + G + SL + +
Sbjct: 42 NKEQFIKSCAQYGIKPDDYIIDDIYDKVKKSTNKNESNNSSSGERTSLSFTKDTSTTTQS 101
Query: 82 YEYVFED-KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELL 140
+ + E K I + N DE ++P K L++L +E++ R ELL
Sbjct: 102 NQPLAETMKGGLITRK--NSTNNDE-QFKIPQVKKSVLGLDILAKEKREEQEEKRRKELL 158
Query: 141 QAVN 144
N
Sbjct: 159 DRFN 162
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1734 (615.5 bits), Expect = 1.3e-178, P = 1.3e-178
Identities = 334/636 (52%), Positives = 452/636 (71%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+++ L M +E+R+ LP++ R + L+AV++ Q+LV++GETGSGKTTQI QYL E GYT
Sbjct: 497 KRTTLSM-KEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSD 555
Query: 176 GK-VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 234
K +GCTQP +E+G ++G EVGY+IRFED TS T +KYMTDGML RE
Sbjct: 556 SKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRE 615
Query: 235 ILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF 294
L +P L YSV+++DEAHERT++TD+LFGLLK + R DLKL+++SATLDAE+FS YF
Sbjct: 616 CLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYF 675
Query: 295 GSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA 354
PIF IPGR YPVEI YTK PEADY+DAA++TV+QIH+++ PGDILVFLTGQEEI+T+
Sbjct: 676 YKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTS 735
Query: 355 DEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTID 414
EIL R++ LG I EL+I P+Y+ LP+E+Q++IFEP P G RKVV+ATNIAETSLTID
Sbjct: 736 CEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTID 795
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
GI YV+DPGF K ++P+ GM+SL+V PIS+A A QR+GR+GRTGPGKC+RLYT Y
Sbjct: 796 GIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYR 855
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXX 534
+M + +PEIQR NL++ +L+LK++GI+DL+NFDF+DPPP
Sbjct: 856 NEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDD 915
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G LT +GR+MA+FP++P LSK+++ S + CS+E+++I AMLSV N I+ RP++KQ A
Sbjct: 916 EGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEA 974
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 654
D R F DH+ LL VY +W+ S WCYE+YIQ R M+RA D+R QL L++
Sbjct: 975 DRQRAQF-ANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMD 1033
Query: 655 RVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKN-GSYWTVKHPQRVHIHPSSGLAQVLP 713
R V S + I +A+ SG+F + AK + G Y T+ V++HPS L
Sbjct: 1034 RYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAA 1093
Query: 714 RWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
WV+YHEL+ T+KEYM V+ + P+WLVE+AP +++
Sbjct: 1094 EWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFK 1129
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 332/632 (52%), Positives = 452/632 (71%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+ E+R LPIY +++L++A+ + VL+++GETGSGKTTQIPQYLHEA YT++G VGCTQ
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQ 683
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E G LG EVGYSIRF+DCTS TI+KY+TDGMLLRE LS+ L
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YS +++DEAHERT+STDILF LLKD+++ R+D KL+++SATLDAEKFS YF ++PIF I
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PG+ +PVEI ++K PE+DY++A+++TVL IH+ + PGDILVFLTGQ+EI TA EIL R
Sbjct: 804 PGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 363 RGLGSKIAE-LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
+ L S LII PIY++LP+E+Q+ IFEP P G RK +LATNIAE SLTIDGI +VID
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGF K+K Y+ + M+SL+V PISKA+A QRAGR+GRTGPGKC+RLYT Y +M + +
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKV 541
VPEIQR NL ++VL+LK+LGI+D ++FDF+D P G LTK+
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKL 1043
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
G++MA FP++P LSK+++ S C+D+++TI +MLSV N IFYRP++K + AD + F
Sbjct: 1044 GKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKF 1102
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
+ GD I L +YN W+E ++S WC+EN+IQ R++KRA+D+R Q+ + E+ +V
Sbjct: 1103 IMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVK 1161
Query: 662 SNLNDLDAIK-----KAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
+ + DA K K+I SG+F H K Y T+ Q+V IHPSS L P +V
Sbjct: 1162 KSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFV 1221
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
VYHELVLT KEY+R T ++P+WL+++AP+ +
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 332/632 (52%), Positives = 452/632 (71%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+ E+R LPIY +++L++A+ + VL+++GETGSGKTTQIPQYLHEA YT++G VGCTQ
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQ 683
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P +E G LG EVGYSIRF+DCTS TI+KY+TDGMLLRE LS+ L
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YS +++DEAHERT+STDILF LLKD+++ R+D KL+++SATLDAEKFS YF ++PIF I
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PG+ +PVEI ++K PE+DY++A+++TVL IH+ + PGDILVFLTGQ+EI TA EIL R
Sbjct: 804 PGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 363 RGLGSKIAE-LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
+ L S LII PIY++LP+E+Q+ IFEP P G RK +LATNIAE SLTIDGI +VID
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGF K+K Y+ + M+SL+V PISKA+A QRAGR+GRTGPGKC+RLYT Y +M + +
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKV 541
VPEIQR NL ++VL+LK+LGI+D ++FDF+D P G LTK+
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKL 1043
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
G++MA FP++P LSK+++ S C+D+++TI +MLSV N IFYRP++K + AD + F
Sbjct: 1044 GKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKF 1102
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
+ GD I L +YN W+E ++S WC+EN+IQ R++KRA+D+R Q+ + E+ +V
Sbjct: 1103 IMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVK 1161
Query: 662 SNLNDLDAIK-----KAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
+ + DA K K+I SG+F H K Y T+ Q+V IHPSS L P +V
Sbjct: 1162 KSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFV 1221
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
VYHELVLT KEY+R T ++P+WL+++AP+ +
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLF 1253
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1681 (596.8 bits), Expect = 2.2e-176, Sum P(2) = 2.2e-176
Identities = 329/702 (46%), Positives = 474/702 (67%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFED-KIDFIRDSVIDGENLDELHSELPD 112
A+ + WE + G + K D + V ED K+D+ + +++ E D
Sbjct: 492 AQHKHWELAGTKLGDIM-GIQKKEDGGDSKAVGEDGKVDYRAEQKF-ADHMKEKSEASSD 549
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
+K+K+ LE +R+ LPI+ R +LL + + ++++VGETGSGKTTQ+ QYLHE GY
Sbjct: 550 FAKKKTLLE----QRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGY 605
Query: 173 TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
T G VGCTQP +EM LG EVGY+IRFEDCTSEKT++KYMTDG+LL
Sbjct: 606 TSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILL 665
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+D++KF+
Sbjct: 666 RESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFAS 725
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQIH++ GDIL+F+ GQE+IE
Sbjct: 726 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIE 785
Query: 353 -TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
T+D+I++ R L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSL
Sbjct: 786 VTSDQIVE-RLADLENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSL 843
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
T+DGI +V+D G+ K+K +NPR GM++L V+PIS+A+A QRAGR+GRTGPG+C+RLYT
Sbjct: 844 TVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQS 903
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXX 531
+ +M T+PEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 904 AFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGA 963
Query: 532 XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
G LT GR M EFPLDP LSKM++ S CS +I+ I +MLSV SIFYRPK ++
Sbjct: 964 LDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVP-SIFYRPKGRE 1022
Query: 592 VHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEG 651
+D R F + DH+ L VY W+ NYS+ WC +++I ++M++ R++R QL+
Sbjct: 1023 EESDQVREKFSVPE-SDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKD 1081
Query: 652 LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV 711
++ + ++ + S +D D I+K I + +F +AKL+ G Y V+ H+HP+S L +
Sbjct: 1082 IMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALFGM 1141
Query: 712 --LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P +++YHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1142 GYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIK 1183
Score = 54 (24.1 bits), Expect = 2.2e-176, Sum P(2) = 2.2e-176
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 40 RYNLDSAGDKMN----PFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRD 95
+YN + A D+ + P + E+ + G+ +++ +++ + +E ED+ RD
Sbjct: 301 KYN-EWANDRKHFGSTPRLSRGKGEKREEGEGGIQFDDEDEKEQ--WE---EDQRQADRD 354
Query: 96 SVIDGENLDELHSELPDKSKE--KSALEMLQEE 126
+ E DE H+ L S E K ++LQ++
Sbjct: 355 WYMMDEGYDEFHNPLTSSSDEYVKKREQILQKQ 387
Score = 47 (21.6 bits), Expect = 1.2e-175, Sum P(2) = 1.2e-175
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 23 DEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWE-EHQMGK---------ASLKYG 72
D+E + E R ++Y + + NP E ++ +HQ + AS K
Sbjct: 90 DDENQEDGESRNGKKERKYRVTGSETPSNPGGVSEEFKRKHQQREKDRREHGVYASSKED 149
Query: 73 -SKNKNQSNDYEY 84
SK+KN+S D E+
Sbjct: 150 KSKDKNRSRDREH 162
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1684 (597.9 bits), Expect = 2.5e-175, Sum P(2) = 2.5e-175
Identities = 328/701 (46%), Positives = 473/701 (67%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDK 113
A+ + WE + G K K + D + K+D+ + +++ + +
Sbjct: 463 AQHKHWELAGTKLGDIM-GVK-KEEEPDKSLTEDGKVDYRTEQKF-ADHMKKKSEASSEF 519
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 520 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 575
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQP +EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 576 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR 635
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 636 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASF 695
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 696 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 755
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 756 TSDQIVEHLEE-LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 813
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 814 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 873
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 874 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 933
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 934 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 992
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH++ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 993 ESDQIREKFAVPE-SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1051
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1052 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1111
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1112 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1152
Score = 41 (19.5 bits), Expect = 2.5e-175, Sum P(2) = 2.5e-175
Identities = 9/50 (18%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY + +V + ++ ++ + + ++N + E WE ++M
Sbjct: 335 EFHNPLAYSSDDYVRRREQHLHKQKQKRISAQRRQINE--DNERWETNRM 382
Score = 40 (19.1 bits), Expect = 3.2e-175, Sum P(2) = 3.2e-175
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G + E++ WE+ Q
Sbjct: 272 YKYNEWADDRRHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQ 319
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1679 (596.1 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 325/680 (47%), Positives = 465/680 (68%)
Query: 76 KNQSNDYEYVFED-KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
K + + V ED K+D+ + +++ + +K+KS LE +R+ LPI+
Sbjct: 482 KKEEEPDKAVTEDGKVDYRTEQKF-ADHMKRKSEASSEFAKKKSILE----QRQYLPIFA 536
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXX 194
+ ELL + + ++++VGETGSGKTTQ+ QYLHE GYT G +GCTQP
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 596
Query: 195 XXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHE 254
+EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLRE L E +L+ YS +++DEAHE
Sbjct: 597 VSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 255 RTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYT 314
R+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV+I ++
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFS 716
Query: 315 KAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE-TADEILKHRTRGLGSKIAELI 373
K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE T+D+I++H L + A L
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE-LENAPA-LA 774
Query: 374 ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPR 433
+ PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NPR
Sbjct: 775 VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPR 834
Query: 434 TGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANV 493
GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT Y ++ TVPEIQRTNLANV
Sbjct: 835 IGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV 894
Query: 494 VLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
VL+LKSLG+ DL+ F F+DPPP G LT GR M EFPLDP
Sbjct: 895 VLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPA 954
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
LSKM++ S CS EI+ I +MLSV +IFYRPK ++ +D R F + DH+ L
Sbjct: 955 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1012
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
VY W+ NYST WC +++I ++M++ R++R QL+ ++ + + + S D D ++K
Sbjct: 1013 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKC 1072
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQ 731
I + +F +AKL+ G Y ++ H+HP+S L + P ++VYHELV+TTKEYM+
Sbjct: 1073 ICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQC 1132
Query: 732 VTELKPEWLVEIAPHYYQLK 751
VT + EWL E+ P +Y +K
Sbjct: 1133 VTAVDGEWLAELGPMFYSVK 1152
Score = 44 (20.5 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY E +V + ++ ++ + + ++N + E WE ++M
Sbjct: 335 EFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINE--DNERWETNRM 382
Score = 41 (19.5 bits), Expect = 8.4e-175, Sum P(2) = 8.4e-175
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G + E++ WE+ Q
Sbjct: 272 YKYNEWADDRRHLGSTPRLSRGRGRREEGEEGISFDTEEERQQWEDDQ 319
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1679 (596.1 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 328/701 (46%), Positives = 472/701 (67%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDK 113
A+ + WE + G K K + D + K+D+ + +++ + +
Sbjct: 462 AQHKHWELAGTKLGDIM-GVK-KEEEPDKALTEDGKVDYRTEQKF-ADHMKKKSEASSEF 518
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 519 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 574
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQP +EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 575 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR 634
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 635 ESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAF 694
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 695 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 754
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 755 TSDQIVEHLEE-LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 812
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 813 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 872
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 873 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 932
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 933 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 991
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 992 ESDQIREKFAVPE-SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1050
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1051 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1110
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1111 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1151
Score = 44 (20.5 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY E +V + ++ ++ + + ++N + E WE ++M
Sbjct: 334 EFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINE--DNERWETNRM 381
Score = 40 (19.1 bits), Expect = 1.1e-174, Sum P(2) = 1.1e-174
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G + E++ WE+ Q
Sbjct: 271 YKYNEWADDRKHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQ 318
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1678 (595.7 bits), Expect = 5.2e-175, Sum P(2) = 5.2e-175
Identities = 327/701 (46%), Positives = 472/701 (67%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDK 113
A+ + WE + G K K + D + K+D+ + +++ E +
Sbjct: 464 AQHKHWELAGTKLGDIM-GVK-KEEEPDKAMTEDGKVDYRTEQKF-ADHMKEKSEASSEF 520
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLH+ GYT
Sbjct: 521 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYT 576
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQP +EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 577 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR 636
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DA+KF+ +
Sbjct: 637 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAF 696
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 697 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 756
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 757 TSDQIVEHLEE-LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 814
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 815 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 874
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 875 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 934
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 935 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 993
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 994 ESDQIREKFAVPE-SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1052
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1053 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1112
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1113 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1153
Score = 44 (20.5 bits), Expect = 5.2e-175, Sum P(2) = 5.2e-175
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY E +V + ++ ++ + + ++N + E WE ++M
Sbjct: 336 EFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINE--DNERWETNRM 383
Score = 39 (18.8 bits), Expect = 1.7e-174, Sum P(2) = 1.7e-174
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G + E++ WE+ Q
Sbjct: 273 YKYNEWADDRRHLGSTPRLSRGRGRREDGEEGIAFDTEEERQQWEDDQ 320
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1689 (599.6 bits), Expect = 7.7e-174, P = 7.7e-174
Identities = 340/672 (50%), Positives = 466/672 (69%)
Query: 99 DGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSG 158
DG ++ L ++ K + ++L E+R+TLP++ ++E L+ +N Q L++VGETGSG
Sbjct: 32 DG-GINSLINKWNGKPYSQRYYDIL-EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSG 89
Query: 159 KTTQIPQYLHEA--GYT--KQGK--VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 212
KTTQIPQ++ +A T K+ K VGCTQP +EM V +G EVGYSIR
Sbjct: 90 KTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIR 149
Query: 213 FEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF 272
FEDC+S +T+LKY+TDGMLLRE +++P LE Y V+++DEAHERTL+TD+LFGLLK+++K
Sbjct: 150 FEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKN 209
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQI 332
R DLKL++ SATL+AEKF DYF AP+ K+PGR +PVEI YT+ PE DY++AAI TV+QI
Sbjct: 210 RPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQI 269
Query: 333 HVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEP 392
H+ + PGDILVFLTG+EEIE A + LG ++ + + P+Y+ LP +Q KIF+P
Sbjct: 270 HMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDP 329
Query: 393 TPE-----G--ARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPIS 445
PE G RK+V++TNIAETSLTIDGI YVIDPGF+K K YNPR +ESLLV PIS
Sbjct: 330 APEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPIS 389
Query: 446 KASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDL 505
KASA QR+GR+GRT PGKCFRLYT +++ D+ T PEI R+NLAN VL LK LGIDDL
Sbjct: 390 KASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL 449
Query: 506 VNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDK 565
V+FDF+DPP G LTK G M+EFPLDP ++KM++ S +
Sbjct: 450 VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFN 509
Query: 566 CSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV-GDHIALLRVYNSWRECNY 624
CS+EI++++AMLSV N F RP++ Q AD A+ F G++ GDH+ LL VY+++++ N
Sbjct: 510 CSNEILSVSAMLSVPNC-FIRPREAQKAADEAKARF--GHIEGDHLTLLNVYHAFKQNNE 566
Query: 625 STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS-NLNDLDA---IKKAITSGFFP 680
WCYEN+I R+MK A ++R QL ++ R +++ S + N D I+KA+ +G+F
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFM 626
Query: 681 HSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWL 740
A L++ G Y TVK Q VH+HPS+ L P WV+Y+E VLT++ ++R VT+++ EWL
Sbjct: 627 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWL 685
Query: 741 VEIAPHYYQLKD 752
V++A HYY L +
Sbjct: 686 VDVASHYYDLSN 697
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
Identities = 334/658 (50%), Positives = 457/658 (69%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA-- 170
K+ + E+L E+R+ LP++ +D+ L +N Q L++VGETGSGKTTQIPQ++ +A
Sbjct: 49 KAYSQRYFEIL-EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVV 107
Query: 171 -GYTKQGK---VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYM 226
+ +G+ VGCTQP EM V +G EVGYSIRFEDCTS +T+LKY+
Sbjct: 108 ADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYL 167
Query: 227 TDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLD 286
TDGMLLRE +++P LE Y V+++DEAHERTL+TD+LFGLLK++++ R DLKL++ SATL+
Sbjct: 168 TDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLE 227
Query: 287 AEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLT 346
AEKF +YF AP+ K+PGR +PVEI YT+ PE DY++AAI TV+QIH+ + PGDILVFLT
Sbjct: 228 AEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLT 287
Query: 347 GQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA---RK 399
G+EEIE A + LG ++ + + P+Y+ LP +Q KIF+P P EG RK
Sbjct: 288 GEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRK 347
Query: 400 VVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRT 459
+V++TNIAETSLTIDGI YVIDPGF+K K YNPR +ESLLV PISKASA QR+GR+GRT
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRT 407
Query: 460 GPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXX 519
PGKCFRLYT +++ D+ T PEI R+NLAN VL LK LGIDDLV+FDF+DPP
Sbjct: 408 RPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
Query: 520 XXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
G LTK G M+EFPLDP +SKM++ S + CS+EI++++AMLSV
Sbjct: 468 MRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSV 527
Query: 580 GNSIFYRPKDKQVHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRS 638
N F RP++ Q AD A+ F G++ GDH+ LL VY+++++ N WC+EN++ R+
Sbjct: 528 PNC-FVRPREAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 639 MKRARDIRDQLEGLLERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTV 694
MK A ++R QL ++ R +++ S + N D I+KA+ +G+F A L++ G Y TV
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTV 644
Query: 695 KHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
K Q VH+HPS+ L P WV+Y+E VLTT+ ++R VT+++ EWLV++A HYY L +
Sbjct: 645 KDNQVVHLHPSNCLDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN 701
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1682 (597.2 bits), Expect = 4.3e-173, P = 4.3e-173
Identities = 328/701 (46%), Positives = 472/701 (67%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDK 113
A+ + WE + G K K + D + K+D+ + +++ + +
Sbjct: 2 AQHKHWELAGTKLGDIM-GVK-KEEEPDKALTEDGKVDYRTEQKF-ADHMKKKSEASSEF 58
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 59 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 114
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQP +EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 115 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR 174
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 175 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASF 234
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 235 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 294
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 295 TSDQIVEHLEE-LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 352
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 353 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 412
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 413 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 472
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 473 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 531
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 532 ESDQIREKFAVPE-SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 590
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 591 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 650
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 651 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 691
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1670 (592.9 bits), Expect = 8.0e-172, P = 8.0e-172
Identities = 339/643 (52%), Positives = 443/643 (68%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCT 181
L ++R LP++ Y+ + ++ ++ +Q +V+VGETGSGKTTQIPQ+ + +K K V CT
Sbjct: 65 LYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QP +EM VKLG EVGYSIRFEDC++ KT+LKYMTDGMLLRE +S+P L
Sbjct: 125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPML 184
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
+ Y V+++DEAHERTL+TDIL G+LK++I+ RSDLKL++ SATLDA KF YF +AP+ K
Sbjct: 185 DQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMK 244
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKH 360
+PGR +PVEI YT PE DY++AAI TV+QIH+ + GDIL+FLTGQEEIE A + +K
Sbjct: 245 VPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKR 304
Query: 361 RTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTID 414
LGS+I EL P+Y+ LP LQ +IFEP P GA RKVV++TNIAETSLTID
Sbjct: 305 EIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTID 364
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
G+ +VIDPGF+K K YNPR +ESLLV PISKASA QR+GR+GRT PGKCFRLYT +
Sbjct: 365 GVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFK 424
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXX 534
+M DNT PEI R+NL VVL LK LGIDDLV+FDF+DPP
Sbjct: 425 NEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDD 484
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G LT +G M+EFPLDP L+KM++AS + CS+EI++I AMLSV F RP + + A
Sbjct: 485 DGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQC-FVRPNEAKKAA 543
Query: 595 DNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D A+M F H+ GDH+ LL VY+++++ + WCYEN+I RS+K A ++R QL ++
Sbjct: 544 DEAKMRFAHID--GDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIM 601
Query: 654 ERVEIEVTSN-LNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLA 709
+R + TS D I+KA+ GFF A L++ G Y T+K Q V +HPS+ L
Sbjct: 602 DRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCLD 661
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R VT++KPEWL +AP YY L +
Sbjct: 662 HK-PDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNN 703
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 314/662 (47%), Positives = 454/662 (68%)
Query: 99 DGENLDELH---SELPDKSKEKS-ALEM-LQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
D N E H S + D A+E ++++R+ LP++ R +++ + E V++IVG
Sbjct: 405 DSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVG 464
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
ETGSGKTTQ+ QYL E G+ G +GCTQP EMGV LG +VGY+IRF
Sbjct: 465 ETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRF 524
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
EDCTSEKTI+KYMTDG+LLRE L + +L+ YS +++DEAHER+L+TD+LFGLL+++I R
Sbjct: 525 EDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKR 584
Query: 274 SDLKLLISSATLDAEKFSDYFG-SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQI 332
+DLKL+++SAT+DA+KF+D+FG + P F IPGR +PVE+ + + P DY+DAA+ + I
Sbjct: 585 ADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTI 644
Query: 333 HVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEP 392
H+ GDIL+F+ GQE+IE E++K + L + L + PIY+ LP++LQAKIF+
Sbjct: 645 HLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQR 703
Query: 393 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQR 452
P G RK ++ATNIAETSLT+DGI +VIDPGF K+K YNPR GM++L + P+S+ASA QR
Sbjct: 704 APGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
Query: 453 AGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFID 512
GR+GRTGPG+C+RLYT + ++ +TVPEIQRTNLANVVL+LKSLG+DDL+ F F+D
Sbjct: 764 TGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMD 823
Query: 513 PPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIIT 572
PP G+LT +GR+M EFPLDP LSKM++ S + CSDE++T
Sbjct: 824 APPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLT 883
Query: 573 IAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYEN 632
I +MLSV +IF+RPK ++ AD + F + DH+ L VY WR YS +WC +N
Sbjct: 884 IVSMLSVP-AIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 633 YIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYW 692
Y+ V+++K+ R++R QL+ +++ +++ + SN ++ D ++K I S +F ++A+L+ G Y
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYV 1001
Query: 693 TVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
V+ +HP+S L + +P +VVYHEL++T KEYM+ VT + WL E+ P +Y +
Sbjct: 1002 NVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
Query: 751 KD 752
K+
Sbjct: 1062 KE 1063
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 314/662 (47%), Positives = 454/662 (68%)
Query: 99 DGENLDELH---SELPDKSKEKS-ALEM-LQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
D N E H S + D A+E ++++R+ LP++ R +++ + E V++IVG
Sbjct: 405 DSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVG 464
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
ETGSGKTTQ+ QYL E G+ G +GCTQP EMGV LG +VGY+IRF
Sbjct: 465 ETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRF 524
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
EDCTSEKTI+KYMTDG+LLRE L + +L+ YS +++DEAHER+L+TD+LFGLL+++I R
Sbjct: 525 EDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKR 584
Query: 274 SDLKLLISSATLDAEKFSDYFG-SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQI 332
+DLKL+++SAT+DA+KF+D+FG + P F IPGR +PVE+ + + P DY+DAA+ + I
Sbjct: 585 ADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTI 644
Query: 333 HVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEP 392
H+ GDIL+F+ GQE+IE E++K + L + L + PIY+ LP++LQAKIF+
Sbjct: 645 HLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQR 703
Query: 393 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQR 452
P G RK ++ATNIAETSLT+DGI +VIDPGF K+K YNPR GM++L + P+S+ASA QR
Sbjct: 704 APGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
Query: 453 AGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFID 512
GR+GRTGPG+C+RLYT + ++ +TVPEIQRTNLANVVL+LKSLG+DDL+ F F+D
Sbjct: 764 TGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMD 823
Query: 513 PPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIIT 572
PP G+LT +GR+M EFPLDP LSKM++ S + CSDE++T
Sbjct: 824 APPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLT 883
Query: 573 IAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYEN 632
I +MLSV +IF+RPK ++ AD + F + DH+ L VY WR YS +WC +N
Sbjct: 884 IVSMLSVP-AIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 633 YIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYW 692
Y+ V+++K+ R++R QL+ +++ +++ + SN ++ D ++K I S +F ++A+L+ G Y
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYV 1001
Query: 693 TVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
V+ +HP+S L + +P +VVYHEL++T KEYM+ VT + WL E+ P +Y +
Sbjct: 1002 NVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSI 1061
Query: 751 KD 752
K+
Sbjct: 1062 KE 1063
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1643 (583.4 bits), Expect = 5.8e-169, P = 5.8e-169
Identities = 318/702 (45%), Positives = 466/702 (66%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFE-DKIDFIRDSVIDGENLDELHSELPD 112
A+++ WE ++ G + +D + E DK D+ +D D+ D
Sbjct: 462 AQKKHWELSGTKLGNIM-GVQRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSD 520
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
S++K+ + E+R+ LP++ R ELL + E V++IVGETGSGKTTQ+ QYLHE GY
Sbjct: 521 FSRKKT----ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY 576
Query: 173 TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
+K+G +GCTQP EM +LG +VGY+IRFEDCTSE+T++KYMTDG+LL
Sbjct: 577 SKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILL 636
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L +P L+SYS +++DEAHER+LSTD+LFGLL++++ R DLKL+++SAT+D+ KF+
Sbjct: 637 RESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFAT 696
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG+ P F IPGR +PV++ ++K DY+++A+ LQ+H+T + GD+L+F+ GQE+IE
Sbjct: 697 FFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIE 756
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
E+L+ R + + A L I PIY+ LP++LQAKIF+ + +G RK V+ATNIAETSLT
Sbjct: 757 VTCEVLEERLAEIDNAPA-LSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLT 815
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI YVID G+ K+K YNPR GM++L ++PIS+A+A QR+GR+GRTGPG+ +RLYT
Sbjct: 816 VDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQ 875
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLAN VL+LKSLG+ DL+ F F+DPPP
Sbjct: 876 YKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGAL 935
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT +GR+MAEFPLDP +M++ + + CS E++ I +MLSV SIFYRPK ++
Sbjct: 936 DHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVP-SIFYRPKGRED 994
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD R F DH+ L VY WR+ NYS+ WC E++I +++M++ R++R QL+ +
Sbjct: 995 EADGVREKFQRPE-SDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDI 1053
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + V S D D ++K I S +F +A+L+ G Y ++ H+HP+S L +
Sbjct: 1054 MTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLG 1113
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P +VVYHEL++T KEYM+ T + WL E+ P ++ +K+
Sbjct: 1114 TTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKE 1155
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1613 (572.9 bits), Expect = 1.9e-168, Sum P(2) = 1.9e-168
Identities = 314/643 (48%), Positives = 443/643 (68%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
K E + + +E+R+ LP + R++LL + + QVL++VGETGSGKTTQ+ Q+L+E GY
Sbjct: 475 KDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGY 534
Query: 173 TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
+ G +GCTQP +EMGV+LG VGYSIRFED T T++KYMTDG+LL
Sbjct: 535 HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLL 594
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L + NLE YSV+++DEAHER+L+TDIL GLLK ++ R D+KLL++SAT++++KFSD
Sbjct: 595 RESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSD 654
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG AP F IPGR YPV+I + KAP +DY++AA+ VLQIH++Q GDILVF+TGQE+IE
Sbjct: 655 FFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIE 714
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
EI+ R L L I PIY+ +P +LQAKIF+ G RKVV+ATNIAETSLT
Sbjct: 715 ATCEIIADRLNQLHDA-PRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLT 773
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+ GI YV+D G+ K+K YN + G+++L V PIS+A+A QRAGR+GRTGPG +RLYT
Sbjct: 774 VHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMA 833
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++M + T+PEIQRTNL+N VLILKSLG++++ +FDF+D PP
Sbjct: 834 YIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGAL 893
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G+LT +G++M+ FP+DP LSK+I+ ++ KC++EIITI +MLSV S+FYRPK++
Sbjct: 894 DNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAE 952
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D AR F++ DH+ LL +Y W+ YS WC ++++ +++KRARDIR QL +
Sbjct: 953 ESDAAREKFNVPE-SDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEI 1011
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKN-GSYWTVKHPQRVHIHPSSGLAQV 711
+ + +I + S ++D D +++ + S +F H A K G Y ++ H+H +S L +
Sbjct: 1012 MSKQKISLES-VSDWDIVRRVLCSAYF-HQAACAKGIGEYVHLRSGMPCHLHVTSSLYGL 1069
Query: 712 --LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
LP +V+YHELVLT+KEYM VT + P WL E YY +K+
Sbjct: 1070 GYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 47 (21.6 bits), Expect = 1.9e-168, Sum P(2) = 1.9e-168
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 54 AEQEAWEEHQMGKASLKY-GSKNKNQSNDYEY-VFEDKIDFIRDSVIDGENLDE----LH 107
A+++ WEE Q Y S+++N D + F D + + D + E +++ L
Sbjct: 273 ADRQRWEEEQAHLDRDWYMNSESQNLLGDEVHNPFSD-FETVEDRAHEAEFIEKQKKHLS 331
Query: 108 SELPDKSKEKSALE 121
E D+ KE S E
Sbjct: 332 IEASDRFKENSMWE 345
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1631 (579.2 bits), Expect = 1.1e-167, P = 1.1e-167
Identities = 339/707 (47%), Positives = 459/707 (64%)
Query: 37 SLQRYNLDSAGDKMNPFAEQEA-WEEHQMGKAS---LKYGSK-NKNQSNDYEYVFEDKID 91
SLQ+ D K F WE+ Q +A L+ K + N +YE+VF D+
Sbjct: 129 SLQQSKNDVLHQKQQSFQPPRMNWEDEQFKRADQLILQNDDKIHINDDKEYEFVF-DQTQ 187
Query: 92 FIR-DSV--IDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
F+ D + + G +E E + + E RK+LP+Y YR+E L+ +NE Q
Sbjct: 188 FVNYDDIEELPGNGEEEEEEESGIRDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQT 247
Query: 149 LVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCTQPXXXXXXXXXXXXXQEMGVKLGHEV 207
L++VGETGSGKTTQ+PQYLHEAGY++ +V CTQP EM VKLG +V
Sbjct: 248 LIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRRVAATSVANRVANEMQVKLGEQV 307
Query: 208 GYSIRFED-CTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
GY+IRF+D C T++KY+TDGMLLRE L +P L YS +M+DEAHERTLST+IL LL
Sbjct: 308 GYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLL 367
Query: 267 KDLIKF--RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDA 324
KD++ + DLK++I+SAT++AEKFS +F +API IPGRR+PV+IHYTK PEA+YI A
Sbjct: 368 KDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQA 427
Query: 325 AIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPT 383
AI T+ QIH+TQ PGDILVFLTGQ+EIET +EIL+ LG +I +I+C IYANLP
Sbjct: 428 AITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQ 487
Query: 384 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHP 443
ELQ KIF+PTP RK+VLATNIAETS+TIDGI YVIDPG+ K YNP TGMESL+V P
Sbjct: 488 ELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVP 547
Query: 444 ISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGID 503
S+ASA QRAGR+GR GPGKCFRL+T +++ ++D N PEIQR NL +V+L+L SLGI+
Sbjct: 548 CSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGIN 607
Query: 504 DLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDK 563
DL+ F+F+DPP G+LTK G++M+EFPLDP+ +K I+ SDK
Sbjct: 608 DLLGFEFMDPPSKEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDK 667
Query: 564 DKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECN 623
+ +II+I AML+ +++FYRPKDK+ AD + F+ GD LL+++ W +
Sbjct: 668 FDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQEFN-DLQGDQFMLLKIWQQWVDSG 726
Query: 624 YSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS----------NLNDLDAIKKA 673
YS QWC + +IQ ++MKR ++I +QL L +++ IEV S N ++ + K
Sbjct: 727 YSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKC 786
Query: 674 ITSGFFPHSAKLQKNGS-YWTVKHPQR-----VHIHPSSGLAQVLPR 714
+ SGFF + KL G Y + + + +IHPSS + ++ P+
Sbjct: 787 LISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPK 833
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1630 (578.8 bits), Expect = 1.4e-167, P = 1.4e-167
Identities = 297/648 (45%), Positives = 454/648 (70%)
Query: 107 HSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQY 166
H + D + S + ++E+R+ LP + R++L++ + + QV+++VGETGSGKTTQ+ Q+
Sbjct: 280 HMKKNDGASNFSQTKSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQF 339
Query: 167 LHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYM 226
L+E GY + G +GCTQP +EM VKLG VGY+IRFEDCTS+ T++KYM
Sbjct: 340 LYEDGYGQLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYM 399
Query: 227 TDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLD 286
TDG+LLRE L+EP+L+ YS +++DEAHER L+TD+L GL K +++ R DLKL+++SAT++
Sbjct: 400 TDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMN 459
Query: 287 AEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLT 346
A++FSD+FG AP F IPGR +PV++ ++++P DY+D A+ VL IHV+ GDILVF+T
Sbjct: 460 AKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMT 519
Query: 347 GQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNI 406
GQE+IE E+++ R L +L I PIY+ +P +LQAKIF+ P G RK ++ATNI
Sbjct: 520 GQEDIEVTCELVRERLDALNDP-PKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNI 578
Query: 407 AETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFR 466
AETSLT+DGI YV+D G+SK+K YNP+ GM++L + PIS+A+A QR+GR+GRTGPGK FR
Sbjct: 579 AETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFR 638
Query: 467 LYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXX 526
L+T + ++ T+PEIQRTNL+N +L++KSLG+ D+++FDF+DPPP
Sbjct: 639 LFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDL 698
Query: 527 XXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
G++T +GR+M FP+DP L+K+I+ +++ C++E+ITI +MLSV N +FYR
Sbjct: 699 WALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPN-VFYR 757
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
PK++Q +D AR F + DH+ L VY+ W+ +S WC +++ +S++RA+++R
Sbjct: 758 PKERQEESDAAREKFFVPE-SDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVR 816
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
DQL +++ ++++ S D D +++ I SG++ +AK++ G Y ++ V +HP+S
Sbjct: 817 DQLLDIMKTQKMDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTS 876
Query: 707 GLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
L + LP +VVYHEL+LT+KEYM VT + P WL ++ +Y +K+
Sbjct: 877 ALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSVKE 924
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1625 (577.1 bits), Expect = 4.7e-167, P = 4.7e-167
Identities = 311/663 (46%), Positives = 454/663 (68%)
Query: 95 DSVIDGENLDELHSELPDKSKEKS--ALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIV 152
+ V G N H + D+ + S + L+E+R+ LP + R++LL+ + + QV+V+V
Sbjct: 151 EEVYKGGNKFAHHMKKQDEGGQSSFSKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVV 210
Query: 153 GETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 212
GETGSGKTTQ+ Q+L+E GY K G +GCTQP +EM V LG VGY+IR
Sbjct: 211 GETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIR 270
Query: 213 FEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF 272
FEDCT T +KYMTDG+LLRE L + +L+ YS +++DEAHER L+TD+L GLLK ++
Sbjct: 271 FEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILAR 330
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQI 332
R DLKL+++SAT++AE+FS +FG AP F IPGR +PV++H+++ P DY+D+A+ VL I
Sbjct: 331 RRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAI 390
Query: 333 HVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEP 392
HV+Q PGDILVF+TGQE+IE E++ R + L +L I PIY+ +P E QAKIFE
Sbjct: 391 HVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDP-PKLSILPIYSQMPAEQQAKIFER 449
Query: 393 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQR 452
G RKV++ATNIAETSLT+DGI +V+D G+SK+K YNP+ GM++L + PIS+A+A QR
Sbjct: 450 AAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQR 509
Query: 453 AGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFID 512
+GR+GRTGPGK +RLYT Y +M T+PEIQRT+L+N VL+LKSLG+ DL++FDF+D
Sbjct: 510 SGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMD 569
Query: 513 PPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV-ASDKDKCSDEII 571
PPP G+LT +GR+M FP+DP L+K+I+ A+++ CS+E++
Sbjct: 570 PPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEML 629
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYE 631
TI +MLSV N +FYRPK++Q +D AR F + DH+ LL VY W+ YS WC +
Sbjct: 630 TIVSMLSVPN-VFYRPKERQEESDAAREKFFVPE-SDHLTLLHVYTQWKSNGYSDHWCTK 687
Query: 632 NYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSY 691
+++ ++++RA+++RDQL ++ ++ + S D D I+K I SGF+ +A+++ G +
Sbjct: 688 HFLHAKTLRRAKEVRDQLNDIMVMQKLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEF 747
Query: 692 WTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
++ + +HP+S L + +P +VVYHEL+LT+KEYM VT + P WL E+ +Y
Sbjct: 748 INLRTSVSMALHPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYS 807
Query: 750 LKD 752
+K+
Sbjct: 808 VKE 810
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 332/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 610 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 728 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1618 (574.6 bits), Expect = 2.6e-166, P = 2.6e-166
Identities = 332/648 (51%), Positives = 443/648 (68%)
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK--- 177
E+L++ R LP++ Y++ +N +Q V+VGETGSGKTTQIPQ+ + + G
Sbjct: 103 EILKK-RLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRG 161
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
V CTQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE ++
Sbjct: 162 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMN 221
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSA 297
+P LE Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF +
Sbjct: 222 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNC 281
Query: 298 PIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADE 356
P+ IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A +
Sbjct: 282 PLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACK 341
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETS 410
+K LG + ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETS
Sbjct: 342 RIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETS 401
Query: 411 LTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTL 470
LTIDG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 402 LTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTE 461
Query: 471 HNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXX 530
Y +M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 462 KAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA 521
Query: 531 XXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDK 590
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP +
Sbjct: 522 ALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQC-FVRPTEA 580
Query: 591 QVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQL 649
+ AD ++M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL
Sbjct: 581 KKAADESKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQL 638
Query: 650 EGLLERVEI-----EVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHP 704
+++R + E TS ++ I++A+ +GFF A L++ G Y TVK Q V +HP
Sbjct: 639 SRIMDRFNLPRRSTEFTSRDYYIN-IRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHP 697
Query: 705 SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
S+ L P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY++ +
Sbjct: 698 STVLDHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSN 744
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 330/644 (51%), Positives = 438/644 (68%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ----YLHEAGYTKQGKVGC 180
++R LP++ Y++ + +Q V+VGETGSGKTTQIPQ Y+ K+G V C
Sbjct: 99 KKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRG-VAC 157
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P
Sbjct: 158 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 217
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
LE Y V+++DEAHERTL+TDIL G+LK++++ R+DLK+++ SATLDA KF YF + P+
Sbjct: 218 LERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLL 277
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILK 359
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 278 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 337
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTI 413
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTI
Sbjct: 338 REIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 397
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DG+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 398 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 457
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP
Sbjct: 458 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 517
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + +
Sbjct: 518 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 576
Query: 594 ADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
AD A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL +
Sbjct: 577 ADEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRI 634
Query: 653 LERVEIEVTS-NLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL 708
++R + S + D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 635 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 694
Query: 709 AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 695 DHK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 737
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1579 (560.9 bits), Expect = 3.1e-164, Sum P(2) = 3.1e-164
Identities = 316/701 (45%), Positives = 454/701 (64%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDK 113
A+ + WE + G K K + D + K+D+ + +++ + +
Sbjct: 463 AQHKHWELAGTKLGDIM-GVK-KEEEPDKSLTEDGKVDYRTEQKF-ADHMKKKSEASSEF 519
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 520 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 575
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQP +EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 576 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR 635
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 636 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASF 695
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 696 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 755
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 756 TSDQIVEHLEE-LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 813
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +P G L + I K G SG T P +C RLYT
Sbjct: 814 VDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSA 872
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPP
Sbjct: 873 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 932
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 933 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREE 991
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH++ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 992 ESDQIREKFAVPE-SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1050
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1051 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1110
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1111 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1151
Score = 41 (19.5 bits), Expect = 3.1e-164, Sum P(2) = 3.1e-164
Identities = 9/50 (18%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY + +V + ++ ++ + + ++N + E WE ++M
Sbjct: 335 EFHNPLAYSSDDYVRRREQHLHKQKQKRISAQRRQINE--DNERWETNRM 382
Score = 40 (19.1 bits), Expect = 4.0e-164, Sum P(2) = 4.0e-164
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G + E++ WE+ Q
Sbjct: 272 YKYNEWADDRRHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQ 319
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1593 (565.8 bits), Expect = 1.2e-163, P = 1.2e-163
Identities = 327/658 (49%), Positives = 441/658 (67%)
Query: 112 DKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL--HE 169
DK ++ ++L E R+ LP+Y R+E L+ +E Q++V VGETGSGKTTQIPQ++ E
Sbjct: 58 DKPFSQNYFKIL-ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDE 116
Query: 170 AGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDG 229
+ ++ CTQP EM V LG EVGY+IRFEDC+ T+LKYMTDG
Sbjct: 117 LPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDG 176
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
MLLRE +++ L YS +++DEAHERTL+TDIL GL+K L R DLK+++ SATLDA+K
Sbjct: 177 MLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKK 236
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
F YF AP+ +PGR YPVEI+YT+ PE DY++AA+ TVLQIHV + PGDILVFLTG+E
Sbjct: 237 FQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEE 296
Query: 350 EIETADEILKHRTRGLGSKIAE--LIICPIYANLPTELQAKIFEPTPEGA-----RKVVL 402
EIE A + L + A L + P+Y +LP Q +IFEPTPE RKVV+
Sbjct: 297 EIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVI 356
Query: 403 ATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPG 462
+TNIAETSLTIDGI YV+DPGFSK K YNPR +ESLLV PISKASA QRAGR+GRT PG
Sbjct: 357 STNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPG 416
Query: 463 KCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXX 522
KCFRLYT + K++ + T PEI R+NL++ VL LK LGIDDLV+FD++DPP
Sbjct: 417 KCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRA 476
Query: 523 XXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNS 582
G+LT +GR+ +EFPLDP L+ M++ S + CS+E++++ A+LSV N
Sbjct: 477 LEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN- 535
Query: 583 IFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRA 642
+F RP + AD R F + GDH+ LL VY++++ + WC+ +++ R++ A
Sbjct: 536 VFVRPNSARKLADEMRQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISA 594
Query: 643 RDIRDQLEGLLERVEIEVTSN-LNDLDA---IKKAITSGFFPHSAKLQKNG-SYWTVKHP 697
++R QL +ER E+E+ S +D + I++A+ SGFF AK NG +Y T+K
Sbjct: 595 DNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDN 654
Query: 698 QRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
Q V +HPS GL+ V P WVVY+E VLTTK ++R VT ++PEWL+E+AP+YY L D ++
Sbjct: 655 QVVSLHPSCGLS-VTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDN 711
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
Identities = 324/651 (49%), Positives = 435/651 (66%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE-AGYTKQGK------ 177
E+R LP++ Y+++ ++ + Q + +VGETGSGKTTQIPQ+ E +QG+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 178 -VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
V CTQP +EM V LG EVGYSIRFEDC SE+T+LKY TDGMLLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+ P L+ Y VL++DEAHERTL+TDIL GL+K++++ R+D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETAD 355
P+ +PGR +PVEI +T E DY++AAI TV+QIH+ + GDIL+FLTGQEEIE A
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAET 409
+ + + LG+ L P+Y+ LP Q +IFEP P GA RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 410 SLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYT 469
SLTIDG+ +VIDPGFSK K YNPR +ESLLV PISKASAMQRAGR+GRT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 470 LHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXX 529
Y +M D T PEI R+NL +VVL LK LG +DLV+FDF+DPP
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 530 XXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD 589
GELT++G MAEFPLDP L+KM++ S + CS+EI++I AMLSV + RP +
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNE 549
Query: 590 KQVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQ 648
+ AD A+ F H+ GDH+ LL VY+S+++ QWCY+N+I R+MK A +R Q
Sbjct: 550 MRTEADEAKARFAHID--GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQ 607
Query: 649 LEGLLERVEIE-VTSNLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHP 704
L ++++ + V+++ D I+KA+ +GFF A L+++G Y TVK Q V++HP
Sbjct: 608 LSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 705 SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
S+ L P W +Y+E VLTTK ++R VT+++PEWL++IAP YY L + D
Sbjct: 668 STVLDHK-PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPD 717
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
Identities = 324/651 (49%), Positives = 435/651 (66%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE-AGYTKQGK------ 177
E+R LP++ Y+++ ++ + Q + +VGETGSGKTTQIPQ+ E +QG+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 178 -VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
V CTQP +EM V LG EVGYSIRFEDC SE+T+LKY TDGMLLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+ P L+ Y VL++DEAHERTL+TDIL GL+K++++ R+D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETAD 355
P+ +PGR +PVEI +T E DY++AAI TV+QIH+ + GDIL+FLTGQEEIE A
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAET 409
+ + + LG+ L P+Y+ LP Q +IFEP P GA RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 410 SLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYT 469
SLTIDG+ +VIDPGFSK K YNPR +ESLLV PISKASAMQRAGR+GRT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 470 LHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXX 529
Y +M D T PEI R+NL +VVL LK LG +DLV+FDF+DPP
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 530 XXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD 589
GELT++G MAEFPLDP L+KM++ S + CS+EI++I AMLSV + RP +
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNE 549
Query: 590 KQVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQ 648
+ AD A+ F H+ GDH+ LL VY+S+++ QWCY+N+I R+MK A +R Q
Sbjct: 550 MRTEADEAKARFAHID--GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQ 607
Query: 649 LEGLLERVEIE-VTSNLNDLDA---IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHP 704
L ++++ + V+++ D I+KA+ +GFF A L+++G Y TVK Q V++HP
Sbjct: 608 LSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 705 SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
S+ L P W +Y+E VLTTK ++R VT+++PEWL++IAP YY L + D
Sbjct: 668 STVLDHK-PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPD 717
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1576 (559.8 bits), Expect = 7.3e-162, P = 7.3e-162
Identities = 326/689 (47%), Positives = 457/689 (66%)
Query: 76 KNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSEL------PDKSK-EKSALEMLQEERK 128
K Q N E E+ + + N + + S L P K K E+L E+RK
Sbjct: 17 KKQQNKIEEEEEEITNTTTTTTTTNNNYNNIKSNLTIDQWIPKKETFSKRYYEIL-EKRK 75
Query: 129 TLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQPXXXX 187
LP++ +++ ++ + E QV+++VGETGSGKTTQIPQ++ +AG + GK VG TQP
Sbjct: 76 ELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVA 135
Query: 188 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
+EM +LG EVGYSIRFE+ +S +T +KY+TDGMLLRE +S+P L Y V+
Sbjct: 136 AISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVI 195
Query: 248 MVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRY 307
++DEAHERTLSTDILFGL+KD++K R DLKL++ SATL+A KF YF +AP+ K+PGR +
Sbjct: 196 ILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLH 255
Query: 308 PVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
PVEI YT+ DY+++A+ TV+ IH + GDILVFLTG+EEIE ++ TR G
Sbjct: 256 PVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERG- 314
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
+ + P+Y++LP Q+KIF+ E RK +++TNIAETSLTIDGI +V+DPGFSK
Sbjct: 315 -LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQ 371
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
K+YNPR+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT + + M T PEI R
Sbjct: 372 KTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILR 431
Query: 488 TNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAE 547
+NLA+VVL L LG+ DLV+FDF+DPP G+LT++G M+E
Sbjct: 432 SNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSE 491
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF-HLGNV 606
FPLDP LSKM++ S + CS+EI+TIAAMLS N F RPKD ++ AD+A+ +F H
Sbjct: 492 FPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADSAKKSFDHFD-- 548
Query: 607 GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS-NLN 665
GDH+ +L VY+S+++ WCY+N++ R++K+A +R QL +L R ++ + S ++N
Sbjct: 549 GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVN 608
Query: 666 D---LDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+ IKK I +GFF AK +K Y+T+ Q V HPS+GL + P + +Y+E V
Sbjct: 609 SKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTR-RPEFCIYNEFV 667
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
LT++ Y+R +T++K +WL+E+AP Y++ K
Sbjct: 668 LTSENYIRTITDVKFDWLLELAPSYFKQK 696
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1563 (555.3 bits), Expect = 1.7e-160, P = 1.7e-160
Identities = 336/654 (51%), Positives = 437/654 (66%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL--HEAGYTKQGKVGCTQPX 184
R+ LP++ RDE L+ Q++V VGETGSGKTTQIPQ++ E + + +V CTQP
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 185 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
+EM VKLG EVGYSIRFE+ TS KTILKYMTDGMLLRE + + +L Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
S +++DEAHERTL+TDIL GLLK ++K R DLK++I SATLDAEKF YF AP+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 305 RRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA--------DE 356
R YPVE++YT + DY+D+AI TVLQIH T+ GDIL+FLTG++EIE A D+
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG-----ARKVVLATNIAETSL 411
++ R G G L + P+Y +LP Q +IFEP PE RKVV++TNIAETSL
Sbjct: 330 LV--REEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSL 383
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
TIDGI YV+DPGFSK K YNPR +ESLLV PISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 384 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 443
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXX 531
+ K++ + + PEI R+NL++ VL LK LGIDDLV+FDF+DPP
Sbjct: 444 AFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLAC 503
Query: 532 XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP-KDK 590
G LT +GR ++FPLDPML+ M++ S + +CS EI+TI AMLSV N +F RP KDK
Sbjct: 504 LDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDK 562
Query: 591 QVHADNARMNFHLGNVGDHIALLRVYNSWRE---CNYST-QWCYENYIQVRSMKRARDIR 646
+ AD+A+ N GDHI LL VY++++ Y +WC ++Y+ RS+ A +IR
Sbjct: 563 K-RADDAK-NIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIR 620
Query: 647 DQLEGLLERVEIEV-TSNLND---LDAIKKAITSGFFPHSAKLQKNGS--YWTVKHPQRV 700
QLE L+ R +E+ T++ D I+KA+ SGFF AK +++G+ Y TVK Q V
Sbjct: 621 SQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDV 679
Query: 701 HIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
IHPS+ L WV+Y+E VLT+K Y+R VT ++PEWL+EIAP YY L + +
Sbjct: 680 LIHPSTVLGHDA-EWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQ 732
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
Identities = 337/740 (45%), Positives = 465/740 (62%)
Query: 39 QRYNLDSAGD--KMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDS 96
+R +D +G + NP+ + G +S + + NKN + + + K +
Sbjct: 15 KRQKMDKSGTDPRDNPYLAHMYADTSSNGNSSSQ--ADNKNSA--FAKLQRHKTTAAQAQ 70
Query: 97 VIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETG 156
++ + + P SK S L+ R+ LP++ RDE LQ + Q+LV VGETG
Sbjct: 71 KVEDNEFNPFTNR-PYSSKYFSILKT----RRDLPVHAQRDEFLQLYQQSQILVFVGETG 125
Query: 157 SGKTTQIPQY--LHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 214
SGKTTQIPQ+ L + T++ + CTQP E+ V LG EVGYSIRFE
Sbjct: 126 SGKTTQIPQFVLLDDLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFE 185
Query: 215 DCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRS 274
D TS KT+LKYMTDGMLLRE +++ L YS +++DEAHERT+STD+L GLLK++++ R
Sbjct: 186 DMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRP 245
Query: 275 DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHV 334
DLK++I SATLDA+KF YF AP+ +PGR +PVEI YT PE DY++AAI TVLQIH
Sbjct: 246 DLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHA 305
Query: 335 TQSPGDILVFLTGQEEIETA--------DEILKHRTRGLGSKIAELIICPIYANLPTELQ 386
T+ GDIL+FLTG+EEIE A DE+++ G L + +Y +LP +Q
Sbjct: 306 TEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAG------PLKVYTLYGSLPPHMQ 359
Query: 387 AKIFEPTPE----GAR---KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+IFEP P G R KV+++TNIAETSLTIDGI YV+DPGFSK K YNPR +ESL
Sbjct: 360 QRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL 419
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
LV PISKASA QRAGR+GRT PGKCFRLYT + K++ D T PEI R+NL++ VL LK
Sbjct: 420 LVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKK 479
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
LGIDDLV+FD +DPP G LT +GR +EFPLDP L+ M++
Sbjct: 480 LGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLI 539
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
+S + CS+EI++I A+LSV IF RP ++ AD + N GDH+ LL Y+++
Sbjct: 540 SSPEFYCSNEILSITALLSVPQ-IFVRPASQRKRADEMK-NLFAHPDGDHLTLLNAYHAF 597
Query: 620 R--ECNYST-QWCYENYIQVRSMKRARDIRDQLEGLLERVEIE-VTSNLND---LDAIKK 672
+ E + QWC+++++ +RS++ A ++R QL ++ER E+E ++++ D + I++
Sbjct: 598 KSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYENIRR 657
Query: 673 AITSGFFPHSAKLQKNGS--YWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMR 730
A+ +GFF AK + G Y T+K Q V +HPS+ LA WV+Y+E VLTTK Y+R
Sbjct: 658 ALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVLAHDA-EWVLYNEFVLTTKNYIR 716
Query: 731 QVTELKPEWLVEIAPHYYQL 750
VT +KPEWL++IAP YY +
Sbjct: 717 TVTAVKPEWLIDIAPTYYDI 736
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1530 (543.6 bits), Expect = 5.5e-157, P = 5.5e-157
Identities = 323/652 (49%), Positives = 433/652 (66%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQY-LHEAGYTKQGK-VGCTQPX 184
R+ LP++ R+E L+ + Q++V VGETGSGKTTQIPQ+ L++ GK V CTQP
Sbjct: 91 RRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQPR 150
Query: 185 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
EM V+LG EVGY+IRFE+ + KTILKYMTDGMLLRE + + +L Y
Sbjct: 151 RVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLTRY 210
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
S +++DEAHERTL+TDIL GLLK + R DLK++I SATLDAEKF +YF +AP+ +PG
Sbjct: 211 SCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPG 270
Query: 305 RRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA--------DE 356
R +PVEI+YT + DY+DAAI TVLQIH T+ GDIL+FLTG+EEIE A DE
Sbjct: 271 RTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDE 330
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG-------ARKVVLATNIAET 409
+++ + G L + P+Y +LP Q KIFEP P RKV+++TNIAET
Sbjct: 331 LVREQNCG------PLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAET 384
Query: 410 SLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYT 469
SLTIDGI YV+DPGFSK K YNPR +ESLLV PISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 385 SLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT 444
Query: 470 LHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXX 529
+ K++ + + PEI R+NL++ VL LK LGIDDLV+FDF+DPP
Sbjct: 445 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYL 504
Query: 530 XXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD 589
G+LT +GR ++FPLDPML+ M++ S CS+EI+TI AMLSV N +F RP
Sbjct: 505 QCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPN-VFVRPAS 563
Query: 590 KQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYST----QWCYENYIQVRSMKRARDI 645
+ AD A+++F + GDH+ L+ VY ++ S +WC +N++ RS+ A+++
Sbjct: 564 ARKRADEAKLSFAQAD-GDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNV 622
Query: 646 RDQLEGLLERVEIEVTSNLNDL------DAIKKAITSGFFPHSAKLQK-NGSYWTVKHPQ 698
R+QL+ L+++ ++++ S N + + +KKA+ +GFF AK + N Y TVK Q
Sbjct: 623 RNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAKKKSGNKGYLTVKDNQ 682
Query: 699 RVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
V IHPS+ L++ W++Y+E VLT+K Y+R VT +KPEWLVEIAP YY L
Sbjct: 683 DVLIHPSTVLSKE-GEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYYNL 733
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 302/644 (46%), Positives = 431/644 (66%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ +R+ +L V +Q +VIVGETGSGK+TQIPQYL EAG+ +GKV G T
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-EKTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY+IRF+DC+ T +K++TDGML+RE++S+P
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF-----G 295
L+ YSVL++DEAHERTL TDI GLLK ++K R DL+L+++SATLDA+KF D+F G
Sbjct: 157 LKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESG 216
Query: 296 SAP-----IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
A I + GR +PV+I YT +P DY+ A + TVL+IH T+ GD+L FLTGQEE
Sbjct: 217 DASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEE 276
Query: 351 IETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
+E +L+ + R L G K L + P+YA LP Q ++FE RKVV+ATNIA
Sbjct: 277 VEKVVSLLQEQARTLSRYGMK-KHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIA 335
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI+G+ +VID F K+++YNPRT +ESL+V PISKASA QRAGR+GR GKCFRL
Sbjct: 336 ETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRL 395
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT ++ K + ++TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 396 YTEEDFEK-LPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLF 454
Query: 528 XXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
G LT +G RMAEFPL PM +KM++ S CS EI+TIAAM+ + N IF
Sbjct: 455 ALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQN-IFVA 513
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
P +++ A F + GDH+ +L VY ++ + S+QWC ++++ + + RA +R
Sbjct: 514 PHNQRKSAAREHRKFAVAE-GDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVR 572
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
+QL LL + ++ TS+ D D I + I SGFF ++A++ +GSY T++ + ++IHP S
Sbjct: 573 EQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDS 632
Query: 707 GL-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L + P+WVV++E+V T+K YMR VT ++ WLVE+APH+Y+
Sbjct: 633 VLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYK 676
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 308/650 (47%), Positives = 424/650 (65%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL--HEAGYTKQGKVGCTQPX 184
R+ LP++ +R E L ++ Q++V VGETGSGKTTQIPQY+ E + + V CTQP
Sbjct: 104 RRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQPR 163
Query: 185 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
E+ V+LG EVGYSIRFE+ T+ TILKYMTDG LLRE + +PN+ Y
Sbjct: 164 RVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPNMTRY 223
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
S +++DEAHERTL+TDIL LLK L RSDLK++I SATLDA KF YF API +PG
Sbjct: 224 SCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPG 283
Query: 305 RRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRG 364
R +PVEI YT E DYI+A++ TVLQIH T++ GDIL+FLTG+EEIE ++
Sbjct: 284 RTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDE 343
Query: 365 L--GSKIAELIICPIYANLPTELQAKIFEPTP----EGAR---KVVLATNIAETSLTIDG 415
L + + + P+Y LP + Q KIF P +G R K ++ATNIAETSLTIDG
Sbjct: 344 LIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDG 403
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGFSK K YN R +ESLLV PIS+ASA QRAGR+GRT PGKCFRLYT + K
Sbjct: 404 IVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKK 463
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
++ + T PEI R+NL+N +L LK LG+DDLV+FDF+DPP
Sbjct: 464 ELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDD 523
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G+LT +G +E+PLDP L+ M+V+S + CS+E++++ ++LSV +F RP + + AD
Sbjct: 524 GDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQ-VFMRPANNRKRAD 582
Query: 596 NARMNF-HLGNVGDHIALLRVYNSWR-ECNYST---QWCYENYIQVRSMKRARDIRDQLE 650
+ +F H+ GDH+ LL Y++++ E T +WC+E+++ R + A ++R QL+
Sbjct: 583 EMKEHFKHME--GDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLK 640
Query: 651 GLLERVEIEVTS----NLNDLDAIKKAITSGFFPHSAKLQKNGS-YWTVKHPQRVHIHPS 705
G++ER ++E+ S + N I++ + +GFF A + +G Y T+K Q V +HPS
Sbjct: 641 GIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQNVMLHPS 700
Query: 706 SGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
S L WV+YHE VLT+K+Y+R VT ++PEWL++IAP+YY L + ED
Sbjct: 701 SVLTTDY-EWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDLDNFED 749
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 308/650 (47%), Positives = 435/650 (66%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK-QGK-VGC 180
++ ++ LP++ R +LL + E QV+VI+GETGSGKTTQ+ QYL+E GY +GK +
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCT-SEKTILKYMTDGMLLREILSEP 239
TQP EM V LG EVGYSIRFED T SE T LK++TDG+LLRE L +
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L+ YS +++DEAHER+L+TDIL G K L+ R DLKL+I+SAT++A+KFS +FG+AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEI 357
F IPGR +PV+ YT P DY++AA+ ++IH+ S GDIL+F+TGQE+IET +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 358 LKHR-----TRGLGS----KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
L+ + ++ G+ +I ++ I PIY+ LP +LQ KIF+ RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TSLTI GI+YVID G+SK+K YNP+ G++SL++ PISKA+A QR+GR+GRT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGI-DDLVNFDFIDPPPXXXXXXXXXXXX 527
T + +DM T+PEIQRTNL+N +L+LKSL + D+L F FID PP
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 528 XXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
G+LT +G +MA+FPL P LSK+++ + ++ CSDE++TI +MLSV +FYRP
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQ-VFYRP 821
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
K++Q AD AR F + DH+ LL V+ WR N+S+ WC ++++Q +S+ RARDIRD
Sbjct: 822 KERQKEADIARNKFFIAK-SDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRD 880
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL +L+ +I V S+ D D IKK I SGF +AK+ +Y +K V +HP+S
Sbjct: 881 QLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSA 940
Query: 708 LAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + LP +VVYHEL++T+KEY+ VT + P WL+E Y +K +++
Sbjct: 941 LHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 829 (296.9 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 166/382 (43%), Positives = 243/382 (63%)
Query: 374 ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPR 433
I PIY+ L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVID G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 434 TGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANV 493
GM+ L V PIS+A+A QR+GR+GRTG G C+RLYT + + D+ N +PEIQR+NL+NV
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 494 VLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
VL+LKSL + +L FDFID P G LT +GR+M +FPLDP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
LSK+++ S +C+ EI+ I +MLS SIF K+ ++ + F + DH+ LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
+Y WR NYS WC +N+IQ +++ +A+++ QL +++ + I+ S N + I+K
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKT 1069
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQ 731
I SG+F ++AKL+ Y ++ H+HP+S L + P +V+Y E+V TTKEYMR
Sbjct: 1070 ICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRN 1129
Query: 732 VTELKPEWLVEIAPHYYQLKDV 753
VT + PEWL E+ P ++ +K+V
Sbjct: 1130 VTTVDPEWLCELGPLFFYMKNV 1151
Score = 640 (230.4 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 133/300 (44%), Positives = 195/300 (65%)
Query: 68 SLKYGSKNKNQSNDY-EYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEE 126
++ Y S N+ +D VF+ K D I S+ N++ + + + K+K L L+E
Sbjct: 422 NISYNSSENNKEDDNGSDVFDYKKDKIYSSLF---NIENNNKDKKNTLKDKEELLKLKE- 477
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXX 186
+LPIY + ELL AV +++IVGETGSGKTTQI QYL+E GY + G + CTQP
Sbjct: 478 --SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRV 535
Query: 187 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
EM V +G VGY+IRFED T++ T ++Y+TDG+LLRE L++ L+ YSV
Sbjct: 536 AAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSV 595
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
+++DEAHER+++TD+L G+LK++ R+DLKL+++SAT+DA+KFS +FG+API+ I GR
Sbjct: 596 IIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRT 655
Query: 307 YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-----GDILVFLTGQEEIETADEILKHR 361
+ V I Y + P DYI+ A+ +QIHV+ + GDIL+F+TGQE+I +L R
Sbjct: 656 FKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSER 715
Score = 44 (20.5 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 32 KRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKID 91
KR V+ L + K N F + + +EE K + N N+ Y Y DK
Sbjct: 41 KRRKVNKINKKLTTDDVKSNIFKKIDTFEEASFKKDKVSKRYLNNNEKEKY-YKDRDKNK 99
Query: 92 FIRDSVID 99
++++ D
Sbjct: 100 IKKNNIKD 107
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 829 (296.9 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 166/382 (43%), Positives = 243/382 (63%)
Query: 374 ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPR 433
I PIY+ L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVID G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 434 TGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANV 493
GM+ L V PIS+A+A QR+GR+GRTG G C+RLYT + + D+ N +PEIQR+NL+NV
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 494 VLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
VL+LKSL + +L FDFID P G LT +GR+M +FPLDP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
LSK+++ S +C+ EI+ I +MLS SIF K+ ++ + F + DH+ LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
+Y WR NYS WC +N+IQ +++ +A+++ QL +++ + I+ S N + I+K
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKT 1069
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQ 731
I SG+F ++AKL+ Y ++ H+HP+S L + P +V+Y E+V TTKEYMR
Sbjct: 1070 ICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRN 1129
Query: 732 VTELKPEWLVEIAPHYYQLKDV 753
VT + PEWL E+ P ++ +K+V
Sbjct: 1130 VTTVDPEWLCELGPLFFYMKNV 1151
Score = 640 (230.4 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 133/300 (44%), Positives = 195/300 (65%)
Query: 68 SLKYGSKNKNQSNDY-EYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEE 126
++ Y S N+ +D VF+ K D I S+ N++ + + + K+K L L+E
Sbjct: 422 NISYNSSENNKEDDNGSDVFDYKKDKIYSSLF---NIENNNKDKKNTLKDKEELLKLKE- 477
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXX 186
+LPIY + ELL AV +++IVGETGSGKTTQI QYL+E GY + G + CTQP
Sbjct: 478 --SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRV 535
Query: 187 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
EM V +G VGY+IRFED T++ T ++Y+TDG+LLRE L++ L+ YSV
Sbjct: 536 AAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSV 595
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
+++DEAHER+++TD+L G+LK++ R+DLKL+++SAT+DA+KFS +FG+API+ I GR
Sbjct: 596 IIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRT 655
Query: 307 YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-----GDILVFLTGQEEIETADEILKHR 361
+ V I Y + P DYI+ A+ +QIHV+ + GDIL+F+TGQE+I +L R
Sbjct: 656 FKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSER 715
Score = 44 (20.5 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 32 KRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKID 91
KR V+ L + K N F + + +EE K + N N+ Y Y DK
Sbjct: 41 KRRKVNKINKKLTTDDVKSNIFKKIDTFEEASFKKDKVSKRYLNNNEKEKY-YKDRDKNK 99
Query: 92 FIRDSVID 99
++++ D
Sbjct: 100 IKKNNIKD 107
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 299/644 (46%), Positives = 422/644 (65%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L V YQ +VIVGETG GK+TQ+PQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP E G LGHEVGY IRF+DCT T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDAEKF D+F S
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI A + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
+ET +L + R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVA 345
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRL 405
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT + + + +TVPE+QR+NLA VVL LK+LGID ++ F F+ PPP
Sbjct: 406 YTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLY 464
Query: 528 XXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVF 523
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
P +++ A F + GDH+ +L VY ++ + N S+QWC E+++ + + RA +R
Sbjct: 524 PSNQKSQATRVHRKFAVEE-GDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVR 582
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
DQL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T++ +HIHP+S
Sbjct: 583 DQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 707 GL-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 294/643 (45%), Positives = 426/643 (66%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VI+GETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT+ T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YS +M+DEAHERTL TDI GLLK + K R DL+L+++SATLDAEKF D+F S
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGLGSKIAE--LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R LG + L I P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR+ GKC+RLY
Sbjct: 347 TSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLY 406
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
T + + + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 407 TEEAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 529 XXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N +F P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVVP 524
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ A A F + GDH+ +L VY ++ + N ++QWC E+++ + + RA +R+
Sbjct: 525 SNQKSQAIRAHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T++ +HIHP+S
Sbjct: 584 QLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASV 643
Query: 708 L-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 644 LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 294/644 (45%), Positives = 426/644 (66%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT + T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDA+KF D+F S
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GD+L FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 351 IETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
+ET +L + R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT + K + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 406 YTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 528 XXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
P +++ HA F + GDH+ +L +Y ++ + N ++WC E+++ + + RA +R
Sbjct: 524 PPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
+QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T++ +HIHP+S
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 707 GL-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 298/671 (44%), Positives = 440/671 (65%)
Query: 95 DSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGE 154
D + D NL E+P KE LQ+E +LP++ +D LL+ E+ ++I+ E
Sbjct: 44 DKINDNNNLKN-QLEIP---KEIPKEIKLQKE--SLPVFTAKDALLKNFKEHSTVIIISE 97
Query: 155 TGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 214
TG+GKTTQIPQYL+E GY G + TQP QEMGV+LG +VGY +RF+
Sbjct: 98 TGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFD 157
Query: 215 DCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR- 273
D T+EKT LKYMTDGML+RE + + +L YSV+++DEAHERTL+TD+LFGLLK + K R
Sbjct: 158 DKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRRE 217
Query: 274 --SDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQ 331
+ LK++I SATLDAE FS YF +AP+ I GR++PV+I+YT+ + DY+DAA++TVLQ
Sbjct: 218 KKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQ 277
Query: 332 IHVT------------QSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
IH+ + GDILVFLTG++EIE +++L R L +LI+CPI++
Sbjct: 278 IHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFS 337
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
LP E Q K+FE P+G+RKV+LATNIAETSLTI+GI+YV+D G K K +NP+ G++SL
Sbjct: 338 ALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSL 397
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+ PISKASA QR GR+GR GKC+RLYT + K +D +++PEI+R+N+ANV+L LK+
Sbjct: 398 NIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEK-LDTSSIPEIKRSNIANVILQLKT 456
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
+GI+D+++FDF++ PP G LT++G++MA FPLDPM SK ++
Sbjct: 457 IGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLI 516
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
S + +CS+E++ I ++LSV SIF+ PK+K+ ++ + F + GDHI L V+ +
Sbjct: 517 KSIEFECSEEVLIIISILSV-ESIFFTPKEKKKEVEDVKKIFFSPD-GDHITFLNVFREF 574
Query: 620 RECN--YSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSG 677
++ QWC++++I ++SM + ++ +QL +++ + S +D D IKK+ G
Sbjct: 575 QKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGG 634
Query: 678 FFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKP 737
FF ++A LQ + Y T+ + + IHP+S L P+ ++Y+EL +TTK + R + ++
Sbjct: 635 FFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNELTITTKAFARNIIPIEG 694
Query: 738 EWLVEIAPHYY 748
WL EI P YY
Sbjct: 695 SWLAEICPKYY 705
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 298/645 (46%), Positives = 422/645 (65%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L V YQ LVIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-EKTILKYMTDGMLLREILSEPN 240
QP E G LGHEVGY IRF+DCT + T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----- 295
L YSVLM+DEAHERTL TDI GLLK + K R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTG 226
Query: 296 -----SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
++ I + GR +PV+I Y ++P DYI + + T ++IH ++ GDIL FLTGQEE
Sbjct: 227 DPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGLG--SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R L L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNP+T +E L+V P+SKASA QRAGR+GR GKC+RLY
Sbjct: 347 TSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLY 406
Query: 469 TL--HNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXX 526
T ++ K + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 407 TATEEDFEK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELL 465
Query: 527 XXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFY 585
LT+ +G R+AEFPL+PM +KM++ S CS EI+TIAAM+ + N IF
Sbjct: 466 YALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQN-IFL 524
Query: 586 RPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDI 645
P +++ A F + GDH+ +L VY ++ + + S+QWC E+++ + + RA +
Sbjct: 525 IPPNQKSQAARQHRKFAVEE-GDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVV 583
Query: 646 RDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS 705
R+QL+ LL ++ S+ D D + + I SGFF ++AK G+Y T++ +HIHP+
Sbjct: 584 REQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPT 643
Query: 706 SGL-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
S L A+ PRWVVY+E++ T K YMR VT ++ WLVE+APH+YQ
Sbjct: 644 SVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQ 688
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 294/643 (45%), Positives = 423/643 (65%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YS +M+DEAHERTL TDI GLLK + K R DL+L+++SATLDAEKF D+F S
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGLG--SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R LG L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR+GR+ GKC+RLY
Sbjct: 347 TSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLY 406
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
T + + + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 407 TEDAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 529 XXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ A F + GDH+ +L VY ++ + N ++QWC E+++ + + RA +R+
Sbjct: 525 SNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL+ LL + ++ S+ D D + + I SGFF ++A+ G Y T++ +HIHP+S
Sbjct: 584 QLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPASV 643
Query: 708 L-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 644 LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 333/731 (45%), Positives = 445/731 (60%)
Query: 9 NNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAG--DKMNPFAEQEAWEEHQMGK 66
N + + + + D+ +E + + +F V + + + +A DK+N Q WEE Q+
Sbjct: 96 NELTTKKGLLGDSENETKYASSNSKFNVEVT-HKIKNAKEIDKIN---RQRMWEEQQLRN 151
Query: 67 ASLKYGSKNKN----QSNDYEYVFEDK--IDFIR--DSVIDGENLD-ELHSELPDKSKEK 117
A + S+ Y+YVF+ ID+ D ++ E L E +++EK
Sbjct: 152 AMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLPEEKLQYEARLAQALETEEK 211
Query: 118 SALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
L +QE RK LP++ Y+DELLQ + + QVL+I+GETGSGKTTQ+PQYL E G+T QGK
Sbjct: 212 RILT-IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGK 270
Query: 178 --VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-EKTILKYMTDGMLLRE 234
+ TQP EM V LG EVGY IRFED T+ KT+LKYMTDGMLLRE
Sbjct: 271 LQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLRE 330
Query: 235 ILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF 294
L++ L YS +M+DEAHERTL+TDIL GLLKD++ R LKLLISSAT++A+KFS++F
Sbjct: 331 FLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390
Query: 295 GSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIET 353
+ PIF +PGRRYPV+IHYT PEA+YI AAI T+ QIH TQS PGDILVFLTGQEEIE
Sbjct: 391 DNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIER 450
Query: 354 ADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTI 413
L+ LGS+ ++II PIYANLP E Q KIF+PTPE RKVVLATNIAETSLTI
Sbjct: 451 TKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTI 510
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
DGI+YVIDPGF K SY P TGM LL P S+AS QRAGR+GR GPGKCFR++T +Y
Sbjct: 511 DGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSY 570
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+++ PEI RTNL+N VL+L SLG+ DL+ F +D P
Sbjct: 571 LHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALN 630
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMI-VASDKDKCS---DEIITIAAMLSVGNSIFYRPKD 589
G +T++G+ M EFP +P +K++ A+ ++C +E +TI +ML S+F K
Sbjct: 631 SKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQK- 689
Query: 590 KQVHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQ 648
D A L V DHI L ++N WR +S WC ++ IQ ++M R R+IR+Q
Sbjct: 690 ----RDAAASV--LSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQ 743
Query: 649 L----E--GLLER---VEIEVTSNLNDLDA-IKKAITSGFFPHSAKLQKNGSYWTVKHPQ 698
L E GL+E+ +++ + ++A I + SGF + +L G Y T+
Sbjct: 744 LFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSS 802
Query: 699 ---RVHIHPSS 706
V +HP+S
Sbjct: 803 GGLNVSVHPTS 813
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 761 (272.9 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 155/328 (47%), Positives = 215/328 (65%)
Query: 73 SKNKNQSNDYEYVFEDKIDFIRDSVIDGEN-----LDELHSELPDKSKEKSALEMLQEER 127
S K +S E D ++F+ G N L++L ++ K KEK +++ +ER
Sbjct: 378 SFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIK-KRKEKKMKKII-DER 435
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXX 187
K LPIY YR ++L+A+ ++L++VGETGSGK+TQ+ QYL+E Y G + CTQP
Sbjct: 436 KRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIA 495
Query: 188 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
+EM VK+G EVGY IRF++ TSE T + YMTDGM LR +L P LE SVL
Sbjct: 496 CIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVL 555
Query: 248 MVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRY 307
++DEAHER L TD++ ++KD+ FR +++++ISSATLDAEK S YF APIF +PGR+Y
Sbjct: 556 IIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKY 615
Query: 308 PVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
V+I+YT E++YI A ++T+LQIH+TQ GDILVFL GQ EIE + L+++ L
Sbjct: 616 NVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP 675
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPE 395
K L+I PIY++LP E QA+IFE E
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 689 (247.6 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 142/362 (39%), Positives = 221/362 (61%)
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
RK++L+TNI ETS+TID I YVID G K K YNP +G+ESL+ P SKAS QR GR+G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX 517
R GKCFRL+T ++ D+ DN++PEIQR +++++L+LKSLG+DD++NFDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 518 XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV-ASDKDKCSDEIITIAAM 576
G LT+ GR+MAEFP D SKMI+ A++K C DEI+ +A+M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 577 LSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQV 636
L+ N+IFY K K+ A+N + F + GD + L +Y E N+ST +CY++++Q
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 637 RSMKRARDIRDQLEGLLERVEIEVTS----NLNDLDAIKKAITSGFFPHSAKLQKNGSYW 692
++ + +D++ QL + E+++I +T+ N ++ IKK+I S FF ++A
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 693 TVKHPQRVHIHPSSGLAQ--VLPR----WVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
+K Q V I+P+S L + ++ ++++E++ K Y+R + L +IA
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 747 YY 748
Y+
Sbjct: 1162 YF 1163
Score = 75 (31.5 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 59 WEEHQMGKASLKYGS----KNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELH-SELPDK 113
++E + K LK+GS +N + N+ E+VF+D I I E+ +E +E P K
Sbjct: 161 YDEQILNKGILKFGSAISKQNIQKQNNNEFVFDDDIITTNRKSIKRESFEEKKMNESPTK 220
Query: 114 SKEK 117
K+K
Sbjct: 221 KKKK 224
Score = 39 (18.8 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 55 EQEAWEEHQMGKASLKYGSKNKNQ-SNDYEYVFEDKID 91
++E++EE +M ++ K K K+ +D + ++K D
Sbjct: 205 KRESFEEKKMNESPTKKKKKRKDDIESDNKCDKDEKYD 242
Score = 39 (18.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 21/88 (23%), Positives = 32/88 (36%)
Query: 43 LDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGEN 102
L+ DK + + +E+ + K KN ND Y E K + D D N
Sbjct: 710 LEDINDKKDERNKNHKDDENDENGENEKNDKNEKNDKNDKNYKNE-KNEKNNDKN-DKNN 767
Query: 103 LDELHSELPDKSKEKSALEMLQEERKTL 130
+ +SK K + EE K +
Sbjct: 768 VGNNSKMNVSQSKNKRNINEEIEELKRI 795
Score = 37 (18.1 bits), Expect = 9.6e-147, Sum P(3) = 9.6e-147
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 48 DKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKID 91
DK + + + + ++H K+ +KN +D ++ DK D
Sbjct: 260 DKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHD-KHDKHDKHD 302
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 761 (272.9 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 155/328 (47%), Positives = 215/328 (65%)
Query: 73 SKNKNQSNDYEYVFEDKIDFIRDSVIDGEN-----LDELHSELPDKSKEKSALEMLQEER 127
S K +S E D ++F+ G N L++L ++ K KEK +++ +ER
Sbjct: 378 SFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIK-KRKEKKMKKII-DER 435
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXX 187
K LPIY YR ++L+A+ ++L++VGETGSGK+TQ+ QYL+E Y G + CTQP
Sbjct: 436 KRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIA 495
Query: 188 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
+EM VK+G EVGY IRF++ TSE T + YMTDGM LR +L P LE SVL
Sbjct: 496 CIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVL 555
Query: 248 MVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRY 307
++DEAHER L TD++ ++KD+ FR +++++ISSATLDAEK S YF APIF +PGR+Y
Sbjct: 556 IIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKY 615
Query: 308 PVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
V+I+YT E++YI A ++T+LQIH+TQ GDILVFL GQ EIE + L+++ L
Sbjct: 616 NVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP 675
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPE 395
K L+I PIY++LP E QA+IFE E
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 689 (247.6 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 142/362 (39%), Positives = 221/362 (61%)
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
RK++L+TNI ETS+TID I YVID G K K YNP +G+ESL+ P SKAS QR GR+G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX 517
R GKCFRL+T ++ D+ DN++PEIQR +++++L+LKSLG+DD++NFDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 518 XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV-ASDKDKCSDEIITIAAM 576
G LT+ GR+MAEFP D SKMI+ A++K C DEI+ +A+M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 577 LSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQV 636
L+ N+IFY K K+ A+N + F + GD + L +Y E N+ST +CY++++Q
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 637 RSMKRARDIRDQLEGLLERVEIEVTS----NLNDLDAIKKAITSGFFPHSAKLQKNGSYW 692
++ + +D++ QL + E+++I +T+ N ++ IKK+I S FF ++A
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 693 TVKHPQRVHIHPSSGLAQ--VLPR----WVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
+K Q V I+P+S L + ++ ++++E++ K Y+R + L +IA
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 747 YY 748
Y+
Sbjct: 1162 YF 1163
Score = 75 (31.5 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 59 WEEHQMGKASLKYGS----KNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELH-SELPDK 113
++E + K LK+GS +N + N+ E+VF+D I I E+ +E +E P K
Sbjct: 161 YDEQILNKGILKFGSAISKQNIQKQNNNEFVFDDDIITTNRKSIKRESFEEKKMNESPTK 220
Query: 114 SKEK 117
K+K
Sbjct: 221 KKKK 224
Score = 39 (18.8 bits), Expect = 5.9e-147, Sum P(3) = 5.9e-147
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 55 EQEAWEEHQMGKASLKYGSKNKNQ-SNDYEYVFEDKID 91
++E++EE +M ++ K K K+ +D + ++K D
Sbjct: 205 KRESFEEKKMNESPTKKKKKRKDDIESDNKCDKDEKYD 242
Score = 39 (18.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 21/88 (23%), Positives = 32/88 (36%)
Query: 43 LDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGEN 102
L+ DK + + +E+ + K KN ND Y E K + D D N
Sbjct: 710 LEDINDKKDERNKNHKDDENDENGENEKNDKNEKNDKNDKNYKNE-KNEKNNDKN-DKNN 767
Query: 103 LDELHSELPDKSKEKSALEMLQEERKTL 130
+ +SK K + EE K +
Sbjct: 768 VGNNSKMNVSQSKNKRNINEEIEELKRI 795
Score = 37 (18.1 bits), Expect = 9.6e-147, Sum P(3) = 9.6e-147
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 48 DKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKID 91
DK + + + + ++H K+ +KN +D ++ DK D
Sbjct: 260 DKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHD-KHDKHDKHD 302
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 1049 (374.3 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 217/492 (44%), Positives = 317/492 (64%)
Query: 274 SDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIH 333
S LKL+I SA+LDA FS+YFG A + GR++PV+I YT PE+DY+DA +VT+ QIH
Sbjct: 227 SPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIH 286
Query: 334 VTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPT 393
+ PGDILVFLTGQ+EIE+ + +++ R + + +L+ I++ LP+E Q K+F P
Sbjct: 287 FEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPA 346
Query: 394 PEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRA 453
P G RKV+LATNIAETS+TI GI+YVIDPGF K +SY+P GMESL V P SKA +QR+
Sbjct: 347 PTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRS 406
Query: 454 GRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDP 513
GR+GR GPGK FRLY + K ++D+T PEI+R NL+N++L LK+LGIDD+V FDFID
Sbjct: 407 GRAGREGPGKSFRLYPEREFEK-LEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDK 465
Query: 514 PPXXXXXXXXXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIIT 572
P G+L VG +M+ PL+P+ SK ++ +++ C +E++
Sbjct: 466 PSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLI 525
Query: 573 IAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV-GDHIALLRVYNSWREC--------- 622
A+LSV SIFY P++K+ A ++ N H +V GDH+ L VY E
Sbjct: 526 TVAVLSV-ESIFYDPREKREEARTSK-N-HFASVEGDHLTYLSVYRESDEFLEKRKAAGS 582
Query: 623 --NYST---QWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSG 677
N +WC ENY+ RS+K ARDI Q+ +E++ V+S ND+ A ++ + +
Sbjct: 583 GNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAAS 642
Query: 678 FFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKP 737
FF +A+ Q +G+Y ++ + VHIHP+S L + P V+++EL+ T+K+Y++ +T +
Sbjct: 643 FFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDS 702
Query: 738 EWLVEIAPHYYQ 749
WL E+APH++Q
Sbjct: 703 LWLSELAPHHFQ 714
Score = 404 (147.3 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 86/184 (46%), Positives = 119/184 (64%)
Query: 96 SVIDGENLDELHSELPD-KSKEKSALEMLQ---EERKTLPIYPYRDELLQAVNEYQVLVI 151
S+ GE + + P+ KS S M Q E R++LPI L++ V + +L+I
Sbjct: 3 SMAQGELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILII 62
Query: 152 VGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYS 210
VGETGSGKTTQ+PQ+L+ AG+ ++GK +G TQP +E V+LG +VGYS
Sbjct: 63 VGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYS 122
Query: 211 IRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLI 270
IRF+D TS T LKYMTDG+LLRE L +P+L YSV++VDEAH+R++ TD+L LLK +
Sbjct: 123 IRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQ 182
Query: 271 KFRS 274
+ RS
Sbjct: 183 RTRS 186
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 952 (340.2 bits), Expect = 3.9e-146, Sum P(3) = 3.9e-146
Identities = 188/377 (49%), Positives = 269/377 (71%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFED-KIDFIRDSVIDGENLDELHSELPD 112
A+ + WE + G K K + D E V ED K+D+ + E++ E +
Sbjct: 469 AQHKHWELAGTKLGDIM-GIK-KEEEKD-EMVTEDGKVDYRTEQKF-AEHMKEKSEARSE 524
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GY
Sbjct: 525 FAKKKSILE----QRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY 580
Query: 173 TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
T G +GCTQP +EMGV+LG EVGY+IRFEDCTSE TI+KYMTDG+LL
Sbjct: 581 TDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILL 640
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L E +L++YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DA+KF+
Sbjct: 641 RESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFAS 700
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDILVF+ GQE+IE
Sbjct: 701 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIE 760
Query: 353 -TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
T+++I++H L K L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSL
Sbjct: 761 VTSEQIVEHLEE-L-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSL 818
Query: 412 TIDGIKYVIDPGFSKVK 428
T+DGI +VID G+ K+K
Sbjct: 819 TVDGIMFVIDSGYCKLK 835
Score = 472 (171.2 bits), Expect = 3.9e-146, Sum P(3) = 3.9e-146
Identities = 91/218 (41%), Positives = 137/218 (62%)
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT GR+M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++ +D
Sbjct: 880 GGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESD 938
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ ++ +
Sbjct: 939 QVREKFAVPE-SDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQ 997
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LP 713
+ + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L + P
Sbjct: 998 QRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTP 1057
Query: 714 RWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1058 DYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIK 1095
Score = 40 (19.1 bits), Expect = 3.9e-146, Sum P(3) = 3.9e-146
Identities = 9/50 (18%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY + +V + ++ ++ + + ++N + E WE ++M
Sbjct: 341 EFHNPLAYSSDEYVKKREQHLHKQKQKRISAQRRQINE--DNERWETNRM 388
Score = 38 (18.4 bits), Expect = 6.3e-146, Sum P(3) = 6.3e-146
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G E++ WE+ Q
Sbjct: 278 YKYNEWADDRKHLGSTPRLSRGRGRREDGEEGIAFETEEERQQWEDDQ 325
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 952 (340.2 bits), Expect = 1.0e-145, Sum P(3) = 1.0e-145
Identities = 188/377 (49%), Positives = 269/377 (71%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFED-KIDFIRDSVIDGENLDELHSELPD 112
A+ + WE + G K K + D E V ED K+D+ + E++ E +
Sbjct: 466 AQHKHWELAGTKLGDIM-GIK-KEEEKD-EMVTEDGKVDYRTEQKF-AEHMKEKSEARSE 521
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GY
Sbjct: 522 FAKKKSILE----QRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY 577
Query: 173 TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
T G +GCTQP +EMGV+LG EVGY+IRFEDCTSE TI+KYMTDG+LL
Sbjct: 578 TDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILL 637
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L E +L++YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DA+KF+
Sbjct: 638 RESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFAS 697
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDILVF+ GQE+IE
Sbjct: 698 FFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIE 757
Query: 353 -TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
T+++I++H L K L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSL
Sbjct: 758 VTSEQIVEHLEE-L-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSL 815
Query: 412 TIDGIKYVIDPGFSKVK 428
T+DGI +VID G+ K+K
Sbjct: 816 TVDGIMFVIDSGYCKLK 832
Score = 468 (169.8 bits), Expect = 1.0e-145, Sum P(3) = 1.0e-145
Identities = 90/216 (41%), Positives = 136/216 (62%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNA 597
LT GR+M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++ +D
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQV 934
Query: 598 RMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE 657
R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ ++ +
Sbjct: 935 REKFAVPE-SDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQR 993
Query: 658 IEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRW 715
+ + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L + P +
Sbjct: 994 MSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDY 1053
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
+VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1054 IVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIK 1089
Score = 40 (19.1 bits), Expect = 1.0e-145, Sum P(3) = 1.0e-145
Identities = 9/50 (18%), Positives = 25/50 (50%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM 64
++ P AY + +V + ++ ++ + + ++N + E WE ++M
Sbjct: 338 EFHNPLAYSSDEYVKKREQHLHKQKQKRISAQRRQINE--DNERWETNRM 385
Score = 38 (18.4 bits), Expect = 1.7e-145, Sum P(3) = 1.7e-145
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 16 YRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQ 63
Y+ + D+ H+ R + R G E++ WE+ Q
Sbjct: 275 YKYNEWADDRKHLGSTPRLSRGRGRREDGEEGIAFETEEERQQWEDDQ 322
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 286/642 (44%), Positives = 416/642 (64%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L V YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YS +M+DEAHERTL TDI GLLK + + R DL+LL++SATLDAEKF D+F S
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGLG--SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R LG L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR+GR+ GKC+RLY
Sbjct: 347 TSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLY 406
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
T + K + TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 407 TEEAFDK-LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 529 XXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ A F + GDH+ +L VY ++ + N ++QWC E+++ + + RA +R+
Sbjct: 525 GNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVRE 583
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y + P ++++ +
Sbjct: 584 QLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYLTL 643
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
+ + V+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 644 FNRKFLQKVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 685
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1306 (464.8 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 270/585 (46%), Positives = 378/585 (64%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L V YQ +VIVGETG GK+TQ+PQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP E G LGHEVGY IRF+DCT T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDAEKF D+F S
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI A + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
+ET +L + R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVA 345
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRL 405
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT + + + +TVPE+QR+NLA VVL LK+LGID ++ F F+ PPP
Sbjct: 406 YTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLY 464
Query: 528 XXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVF 523
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
P +++ A F + GDH+ +L VY ++ + N S+QWC E+++ + + RA +R
Sbjct: 524 PSNQKSQATRVHRKFAVEE-GDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVR 582
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSY 691
DQL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y
Sbjct: 583 DQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAY 627
Score = 114 (45.2 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
V+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 662
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1396 (496.5 bits), Expect = 8.6e-143, P = 8.6e-143
Identities = 291/648 (44%), Positives = 417/648 (64%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L V YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT T +K++TDGML+RE++ +P
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YS +M+DEAHERTL TDI GLLK + + R DL+LL++SATLDAEKF D+F S
Sbjct: 159 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETS 218
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GDIL FLTGQEE
Sbjct: 219 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 278
Query: 351 IETADEILKHRTRGLG--SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R LG L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 279 VETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 338
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR+GR+ GKC+RLY
Sbjct: 339 TSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLY 398
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
T + K + TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 399 TEEAFDK-LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 457
Query: 529 XXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF P
Sbjct: 458 LGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 516
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ A F + GDH+ +L VY ++ + N ++QWC E+++ + + RA +R+
Sbjct: 517 GNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVRE 575
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYW-TVKHPQR-VHIHPS 705
QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T+ H R +H
Sbjct: 576 QLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHLF 635
Query: 706 SGLAQVLPR-W---VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
+ + R W V+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 636 TVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 683
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1301 (463.0 bits), Expect = 1.4e-142, Sum P(2) = 1.4e-142
Identities = 265/585 (45%), Positives = 382/585 (65%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QP +E G LGHEVGY IRF+DCT + T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----S 296
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDA+KF D+F S
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 297 AP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
P I + GR +PV+I Y ++P DYI + + TV++IH T+ GD+L FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 351 IETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
+ET +L + R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXX 527
YT + K + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP
Sbjct: 406 YTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 528 XXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 587 PKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
P +++ HA F + GDH+ +L +Y ++ + N ++WC E+++ + + RA +R
Sbjct: 524 PPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSY 691
+QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAY 627
Score = 114 (45.2 bits), Expect = 1.4e-142, Sum P(2) = 1.4e-142
Identities = 18/34 (52%), Positives = 28/34 (82%)
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
V+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 662
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
Identities = 289/689 (41%), Positives = 427/689 (61%)
Query: 66 KASLKYGSKNKNQSNDYEYV--FEDKIDFIRDSVIDGENLD-ELHSELPDKSKEKSALEM 122
K + SKN + + V E DF + V+ +N E SE SK K LE
Sbjct: 34 KKKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKRSE-NSPSKRKDILE- 91
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+RK LPI+ D L Q + + +V+V+VGETGSGK+TQIPQ+L+E Y ++G V TQ
Sbjct: 92 ---QRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQ 148
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P E G +LG +VGYSIRF+D TS+KT +KY+TDGMLLRE++++P L
Sbjct: 149 PRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS 208
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
Y L++DEAHERTL TD+L G +K +IK R L+++I SATL+AE+FS++F A I I
Sbjct: 209 QYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYI 268
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
GR+YPV+IHYT PE DY+DA + T+ Q+H PGDILVFLTGQ+EIE + ++K +
Sbjct: 269 SGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYS 328
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ L S + ++ CP++A+LP E Q ++F P RKVVL+TNIAETS+TI GI+YVID
Sbjct: 329 KQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDT 388
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
G +K+K +N + G+ESL V PIS+++AMQR+GR+GR G+C+R+YT ++ K + T+
Sbjct: 389 GLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETI 447
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 542
PEI+R +L+ VL LK+ G +D++NF ++DPP G + +G
Sbjct: 448 PEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLG 507
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
+M+ PL P L++ ++A+ + C E+I + + LS +S+F P++K+ A AR+ F
Sbjct: 508 YQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLST-DSMFLFPQEKRDEAIEARLKF- 565
Query: 603 LGNVGDHIALLRVYNSWRECNYST--QWCYENYIQVRSMKRARDIRDQLEG--LLERVEI 658
L + GD + L + E ++ + QWC +N+I R++K DIR QL L + E+
Sbjct: 566 LHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWEL 625
Query: 659 EVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVY 718
+ +N + + + SG+ ++A L +GSY T+ Q + IHPSS L ++Y
Sbjct: 626 NSSPEVNS-ENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMY 684
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHY 747
HELV TTK Y+R V+ ++ WL +APHY
Sbjct: 685 HELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 284/663 (42%), Positives = 423/663 (63%)
Query: 118 SALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
S + L + LPI ++ +L V Y V ++VG+TGSGKTTQ+PQYL +AG+ +GK
Sbjct: 10 SFIPSLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGK 69
Query: 178 -VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
+ TQP +EM KLG +VGYSIRFED TS T +K++TDGMLLRE L
Sbjct: 70 AIAVTQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREAL 129
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+P L YSV+MVDEAHER+LSTDIL G+LK ++K R +L++++SSATL AE F YF
Sbjct: 130 VDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAG 189
Query: 297 -----AP----------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDI 341
P I I GR YPV+ + ++ +Y++ ++ TV IH+ + GDI
Sbjct: 190 DESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDI 249
Query: 342 LVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVV 401
L+FLTG+EEIETA +++ R L K L+ P+YA L T+ Q +FEP PE RKVV
Sbjct: 250 LIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVV 309
Query: 402 LATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGP 461
++TNIAE S+TI+GI YV+D GF+K+++Y+P TG+E+L PISKA+A+QRAGR+GRT P
Sbjct: 310 VSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKP 369
Query: 462 GKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXX 521
GKCFRLYT H Y + + D T+PEIQR+NLA V++ LK+LGID++V FDF+ PP
Sbjct: 370 GKCFRLYTQHAYEQ-LPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIR 428
Query: 522 XXXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVG 580
+LTK +G RMAE +DPM++K+++++ C EI+TIAAM+S+
Sbjct: 429 AFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQ 488
Query: 581 NSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW-RECNYSTQWCYENYIQVRSM 639
+++ + + ++++R F + GDH+ L VY ++ + ++WC +N + RS+
Sbjct: 489 GAVWVQHDGDKKSSESSRRKFAVEE-GDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSL 547
Query: 640 KRARDIRDQLEGLLERVEIEVTS------NLNDL----DAIKKAITSGFFPHSAKLQKNG 689
RA +R QL+ LER I+V N +DL + I++ +T+G+F H+A++Q +G
Sbjct: 548 LRAVSVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDG 607
Query: 690 SYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT-TKEYMRQVTELKPEWLVEIAPHYY 748
++ TV +H HPSS + WV++HE++ T K ++R +T+++ +L+E AP+YY
Sbjct: 608 TFKTVSGGMTLHAHPSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYY 667
Query: 749 QLK 751
++
Sbjct: 668 NMQ 670
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1345 (478.5 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 273/602 (45%), Positives = 394/602 (65%)
Query: 165 QYLHEAGYTKQGKV-GCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSE-KTI 222
+YL EAG+T +G+V G TQP +E G LGHEVGY IRF+DCT + T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 223 LKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISS 282
+K++TDGML+RE++ +P L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++S
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 177
Query: 283 ATLDAEKFSDYFG----SAP------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQI 332
ATLDA+KF D+F S P I + GR +PV+I Y ++P DYI + + TV++I
Sbjct: 178 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKI 237
Query: 333 HVTQSPGDILVFLTGQEEIETADEILKHRTRGL---GSKIAELIICPIYANLPTELQAKI 389
H T+ GD+L FLTGQEE+ET +L + R L G K L + P+YA LP+ Q K+
Sbjct: 238 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKV 296
Query: 390 FEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASA 449
FE RKV++ATN+AETS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA
Sbjct: 297 FERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASA 356
Query: 450 MQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFD 509
QRAGR GR+ GKC+RLYT + K + +TVPE+QR+NLA V+L LK+LGID+++ F
Sbjct: 357 NQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFH 415
Query: 510 FIDPPPXXXXXXXXXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSD 568
F+ PPP LT+ +G R+AEFPL+PM +KM++ S CS
Sbjct: 416 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 475
Query: 569 EIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQW 628
EI++IAAM+ + N IF P +++ HA F + GDH+ +L +Y ++ + N ++W
Sbjct: 476 EILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKW 533
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKN 688
C E+++ + + RA +R+QL+ LL + ++ S+ D D + + I SGFF ++A+
Sbjct: 534 CQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHST 593
Query: 689 GSYWTVKHPQRVHIHPSSGL-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHY 747
G+Y T++ +HIHP+S L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+
Sbjct: 594 GAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHF 653
Query: 748 YQ 749
YQ
Sbjct: 654 YQ 655
Score = 37 (18.1 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 123 LQEERKTLPIYPYRDE 138
++++R+ LP++ Y E
Sbjct: 47 IEQQRQKLPVFKYLAE 62
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 970 (346.5 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 211/480 (43%), Positives = 294/480 (61%)
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE--- 352
++ I I GR YPV+IHY + ++YI I T++ IH TQ PGDILVFLTGQEEIE
Sbjct: 244 TSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLI 303
Query: 353 -TAD---EILK--HRTRGLGSK--IAELIICPIYANLPTELQAKIFEPTPEGA--RKVVL 402
T D EIL+ H+ + + + P+Y+ L Q K+FE + RK+++
Sbjct: 304 QTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIII 363
Query: 403 ATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPG 462
+TNIAETS+TIDG+ YV+D GF K+KSY+ +G+ESL++ P SK+SA QRAGR+GR+ G
Sbjct: 364 STNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAG 423
Query: 463 KCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXX 522
KC+RLYT Y K + D T+PEIQR+NL N +L LK+LGID+++NFDFI PP
Sbjct: 424 KCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRG 483
Query: 523 XXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKD--KCSDEIITIAAMLSV 579
G+LT G MAEFP DP SKMI+ S + CSDE ITI AML++
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNI 543
Query: 580 GNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSM 639
+F Q H + L GDH+ LL ++NS+ S QWC ++ I ++M
Sbjct: 544 -QGLF----TNQNHKSRKHL---LVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAM 595
Query: 640 KRARDIRDQLEGLLERVEIEVTS----NLND---LDAIKKAITSGFFPHSAKLQKNGSYW 692
+R +R QL ++ I V S N N + I+KAI SGFF ++A+LQ +GSY
Sbjct: 596 QRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQ 655
Query: 693 TVKHPQRVHIHPSSGLA-QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
T++ ++ +HP+S L P+WV+++E+ +TTKEYM+ VT ++P WL EIAPHYY+ K
Sbjct: 656 TIREKHKLWLHPTSVLCLSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKFK 715
Score = 397 (144.8 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 96/233 (41%), Positives = 142/233 (60%)
Query: 75 NKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
N N SN+ + F +DS + N + +++ S +K + Q++R +LPIY
Sbjct: 8 NNNSSNNNNNNNNNNSLFDKDSSLSFGNDNFIYN-----SNQKLTI---QQQRISLPIYQ 59
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQPXXXXXXXXXX 193
R +L + +Y LVI+G TG GK+TQIPQYL E+G++ + + CTQP
Sbjct: 60 NRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVAAISLAE 119
Query: 194 XXXQEMGVK-LGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPNLESYSVLMVDE 251
QEMG + +G VGYS+RF++ S+ +T +KY+TDGML+RE++ +P L YSV+M+DE
Sbjct: 120 RVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDE 179
Query: 252 AHERTLSTDILFGLLKDLIKFRSD----------LKLLISSATLDAEKFSDYF 294
AHER+L TD+L GLLK + K R+ LKL+ISSATL+A F ++F
Sbjct: 180 AHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFF 232
Score = 46 (21.3 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 66 KASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDEL--HSELPDKSKEKSALEML 123
K K S N N +ND K+ I + ++ + +++ DKSK+ S + L
Sbjct: 196 KVQKKRNSTNNNNNNDNSL----KL-IISSATLNANDFFNFFNYNQTNDKSKDTSTI--L 248
Query: 124 QEERKTLPI 132
E +T P+
Sbjct: 249 SIEGRTYPV 257
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 272/638 (42%), Positives = 397/638 (62%)
Query: 126 ERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXX 185
+R+ LPI+ R LL + + V++GETGSGKTTQIPQYL+EAG +QG + TQP
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 186 XXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYS 245
E +LG VGY++RF+D TS++T +K++TDGMLLRE + +P L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 246 VLMVDEAHERTLSTDILFGLLKDLIKFRSDL-----KLLISSATLDAEKFSDYFGSAPIF 300
V+++DEAHERT+ TD+LFG++K K R +L K+++ SAT+D ++FS YF AP+
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVL 199
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHV-TQSPGDILVFLTGQEEIETADEILK 359
+ GR++P+++ YTK P++DY+ AA+V+V QIH S DILVFLTGQEEIE + +
Sbjct: 200 YLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCR 259
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
+ L ++ + P+YA+LP Q ++F+ P+G RKV+L+TNIAETS+TI GIKYV
Sbjct: 260 DIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYV 319
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
+D G K K YNP G+E L V +SKA A QR GR+GR G C+RLYT + K D
Sbjct: 320 VDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEK-FDK 378
Query: 480 NTVPEIQ---RTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXX 535
TVPEIQ R NLA+V+L L +L I +++ FDF+ P P
Sbjct: 379 MTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKE 438
Query: 536 GEL--TKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
+L T +GR+MA FPL+P SK I+ S K C++EI+TI ++LSV +S+ Y P ++
Sbjct: 439 DQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSV-DSVLYNPPARRDE 497
Query: 594 ADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
+ R F + + GDH+ LL VY +++ + + +WC EN++ R+M D+R QL +
Sbjct: 498 VQSVRKKF-ISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDIC 556
Query: 654 ERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLP 713
++ + + S+ +D I++ + F ++A+LQ +G+Y TV Q V IHPSS L P
Sbjct: 557 VKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCKP 616
Query: 714 RWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
VVY+ L+ T K YMR + + EWL + AP Y++ K
Sbjct: 617 SCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFRRK 654
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1308 (465.5 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 277/620 (44%), Positives = 405/620 (65%)
Query: 96 SVIDGENL-DELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGE 154
S+ID N +E+ E + ++ + +Q++RK+LP + R++LL + + QV +++GE
Sbjct: 323 SIIDTANTTEEIKQEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGE 382
Query: 155 TGSGKTTQIPQYLHEAGY----TKQGK---VGCTQPXXXXXXXXXXXXXQEMGVKLGHEV 207
TGSGKTTQ+ Q+L+E G+ K G+ + CTQP +EM KLG EV
Sbjct: 383 TGSGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEV 442
Query: 208 GYSIRFEDCT-SEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
GYSIRFED T ++KT++KYMT+G+LLREIL++P L +YS +++DEAHER+L+TDIL GL
Sbjct: 443 GYSIRFEDKTDNKKTVIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLF 502
Query: 267 KDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAI 326
K+L+ R DLKL+++SAT++A +F+ +FG AP F IPGR +PVE+ + + DY++ A+
Sbjct: 503 KNLLAKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAV 562
Query: 327 VTVLQIHVTQ--------SPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIY 378
VL IH+ + + GDILVF+TGQE+IE +++K + L L I PIY
Sbjct: 563 KQVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDP-PPLDIFPIY 621
Query: 379 ANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMES 438
+ +P +LQ KIF T RKVV+ATNIAETSLT+DGIKYVID G KVK YNP+ GM++
Sbjct: 622 STMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDT 681
Query: 439 LLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD-MDDNTVPEIQRTNLANVVLIL 497
L V PIS A+A QR+GR+GRTG G +RLYT D M +PEIQR+NL+N++L+L
Sbjct: 682 LQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLL 741
Query: 498 KSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKM 557
KSL ++D+ +F F+DPPP GELTK+G M +FP++P L+K+
Sbjct: 742 KSLKVNDINSFPFLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKL 801
Query: 558 IVASDKDK--CSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRV 615
I+ S + + CS+E++TI AMLSV N IF RPK++ AD AR F + DH+ LL V
Sbjct: 802 ILLSTQPEFHCSEEVVTIVAMLSVPN-IFNRPKERANEADMAREKFIISE-SDHLTLLNV 859
Query: 616 YNSWR------ECNYS--TQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDL 667
+N W + NY+ WC +N++Q++S+ RA+DI+ QL ++++ ++ + + D
Sbjct: 860 FNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTD- 918
Query: 668 DAIKKAITSGFFPHSAKLQK 687
D I+K + + F+ SAKL K
Sbjct: 919 DDIRKCLCASFYQQSAKLTK 938
Score = 860 (307.8 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 190/433 (43%), Positives = 274/433 (63%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
GDILVF+TGQE+IE +++K + L L I PIY+ +P +LQ KIF T R
Sbjct: 583 GDILVFMTGQEDIEITCDLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTNLQRR 641
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
KVV+ATNIAETSLT+DGIKYVID G KVK YNP+ GM++L V PIS A+A QR+GR+GR
Sbjct: 642 KVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGR 701
Query: 459 TGPGKCFRLYTLHNYHKD-MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX 517
TG G +RLYT D M +PEIQR+NL+N++L+LKSL ++D+ +F F+DPPP
Sbjct: 702 TGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKD 761
Query: 518 XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDK--CSDEIITIAA 575
GELTK+G M +FP++P L+K+I+ S + + CS+E++TI A
Sbjct: 762 LLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVA 821
Query: 576 MLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR------ECNYS--TQ 627
MLSV N IF RPK++ AD AR F + DH+ LL V+N W + NY+
Sbjct: 822 MLSVPN-IFNRPKERANEADMAREKFIISE-SDHLTLLNVFNQWNINLNKFKGNYTKINN 879
Query: 628 WCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQK 687
WC +N++Q++S+ RA+DI+ QL ++++ ++ + + D D I+K + + F+ SAKL K
Sbjct: 880 WCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTD-DDIRKCLCASFYQQSAKLTK 938
Query: 688 ---NGS--YWTVKHP-QRVHIHPSSGL--AQVLPRWVVYHELVLTTKEYMRQVTELKPEW 739
NG + ++H ++ +HP+S L + + +V+YHELVLT KEYM VT + P W
Sbjct: 939 MNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIW 998
Query: 740 LVEIAPHYYQLKD 752
L+E ++ + D
Sbjct: 999 LLEYGYKFFGVAD 1011
Score = 41 (19.5 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDE 105
P +E +EE +G +L S N ++ Y +++ R++ ID E+L +
Sbjct: 143 PVSEPSTYEEEDLGDINLDNFS-NIEADREW-YNIDEESALARNNEID-EDLPQ 193
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
Identities = 270/651 (41%), Positives = 401/651 (61%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
P S + ALE+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYL+E
Sbjct: 49 PSASPYREALEL---QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 105
Query: 171 GYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
G ++QG + TQP E +LG VGY++RFED TSE T +K++TDGM
Sbjct: 106 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGM 165
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL-----KLLISSATL 285
LLRE +S+ L YS +++DEAHERT+ TD+LFG++K K R +L K+++ SAT+
Sbjct: 166 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATM 225
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPG--DILV 343
D + FS YF AP+ + GR++P++I YTK P+ DY+ AA+V+V QIH ++P DILV
Sbjct: 226 DVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIH-QEAPASQDILV 284
Query: 344 FLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLA 403
FLTGQEEIE + + R L +++ P+YA+LP Q ++F+ P+G RKV+++
Sbjct: 285 FLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIIS 344
Query: 404 TNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGK 463
TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QR GR+GR G
Sbjct: 345 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGI 404
Query: 464 CFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXX 522
C+RLYT + K + TVPEIQR NLA+V+L L ++ + +++ FDF+ P P
Sbjct: 405 CYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAI 463
Query: 523 XXXXXXXXXXXXXGELT--KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVG 580
+LT +GR+MA FPL+P +K I+ S K C++EI+TI ++LSV
Sbjct: 464 AQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV- 522
Query: 581 NSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMK 640
+S+ Y P ++ + R F + + GDHI LL +Y +++ + WC EN++ ++M
Sbjct: 523 DSVLYNPPARRDEVQSVRKKF-ISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNML 581
Query: 641 RARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRV 700
++R QL + ++ + + S+ D++++++ + F ++A+LQ +G+Y T Q V
Sbjct: 582 LVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPV 641
Query: 701 HIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
IHPSS L P VVY L+ T K YMR + + EWL E AP Y++ K
Sbjct: 642 AIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
Identities = 270/640 (42%), Positives = 395/640 (61%)
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGC 180
E ++++R+ LPI+ R +LL + V++GETGSGKTTQIPQYL+E G +Q +
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAV 131
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP E +LG VGY++RF+D TS+ T +K++TDGMLLRE +S+
Sbjct: 132 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL 191
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL-----KLLISSATLDAEKFSDYFG 295
L YS +++DEAHERTL TD+LFG++K K R +L K+L+ SAT+D + FS YF
Sbjct: 192 LRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFN 251
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHV-TQSPGDILVFLTGQEEIETA 354
AP+ + GR++P++I YTK P+ DY+ AA+V+V QIH S DILVFLTGQEEIE
Sbjct: 252 GAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAM 311
Query: 355 DEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTID 414
+ + + L +++ P+YA+LP Q ++F+ P+G RKV+++TNIAETS+TI
Sbjct: 312 SKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITIT 371
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
GIKYV+D G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT +
Sbjct: 372 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 431
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXX 533
K + TVPEIQR NLA+V+L L ++ I +++ FDF+ P P
Sbjct: 432 K-FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEH 490
Query: 534 XXGELT--KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
G+LT +GR+MA FPL+P +K I+ S K C++EI+TI A+LSV +SI Y P ++
Sbjct: 491 RDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSV-DSILYNPPSRR 549
Query: 592 VHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEG 651
+ R F + + GDH+ LL VY +++ + +WC EN++ ++M ++R QL
Sbjct: 550 DEVQSVRKKF-VSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRD 608
Query: 652 LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV 711
+ ++ + + S+ D ++I++ + F +A+LQ +GSY T Q V IHPSS L
Sbjct: 609 ICIKMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLFHC 668
Query: 712 LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P VVY EL+ T+K YMR + + EWL E AP +++ K
Sbjct: 669 KPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFRKK 708
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 265/650 (40%), Positives = 397/650 (61%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
P S A+E+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYL+E
Sbjct: 58 PSASPYPEAVEL---QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 114
Query: 171 GYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
G ++QG + TQP E +LG VGY++RF+D TSE T +K++TDGM
Sbjct: 115 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGM 174
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL-----KLLISSATL 285
LLRE +S+ L YS +++DEAHERT+ TD+LFG++K K R +L K+++ SAT+
Sbjct: 175 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATM 234
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHV-TQSPGDILVF 344
D + FS YF AP+ + GR++P+++ YTK P+ DY+ AA+V+V QIH S DILVF
Sbjct: 235 DVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVF 294
Query: 345 LTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLAT 404
LTGQEEIE + + + L +++ P+YA+LP Q ++F+ P+G RKV+++T
Sbjct: 295 LTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIIST 354
Query: 405 NIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKC 464
NIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QR GR+GR G C
Sbjct: 355 NIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGIC 414
Query: 465 FRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXX 523
+RLYT + K D TVPEIQR NLA+V+L L ++ + +++ FDF+ P P
Sbjct: 415 YRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIA 473
Query: 524 XXXXXXXXXXXXGELT--KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN 581
+LT +GR+MA FPL+P +K I+ S K C++EI+TI ++LSV +
Sbjct: 474 QLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-D 532
Query: 582 SIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
S+ + P ++ R F + + GDH+ LL +Y +++ + WC EN++ ++M
Sbjct: 533 SVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTL 591
Query: 642 ARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVH 701
++R QL + ++ + + S+ D++++++ + F +A+LQ +G+Y T Q V
Sbjct: 592 VAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVA 651
Query: 702 IHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
IHPSS L P VVY EL+ T K YMR + + +WL E AP Y++ K
Sbjct: 652 IHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
Identities = 265/644 (41%), Positives = 398/644 (61%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCT 181
+Q++R LPI+ R +L Y+ ++IVGETG GK+TQ+PQ+L EAG+ G+ + T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QP +E LGH+VGY++RF+D + + T +K+MTDG+LLREIL++P L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF-----GS 296
YS++M+DEAHER+ +TDIL GLL+ +I+ R+DL++++SSATLDAE F D+F G+
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 297 -----APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
A I + GR +PV +H+TK DY +A+ TV+ IH ++PGDILVFLTGQ+E+
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 352 ETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
E E L+ L L + P Y LP Q K F+ TP G RKVV+ATNIAE S+
Sbjct: 310 EDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
TI GI YVID G+ K+++ + G+E+L+ +SKASA QRAGR+GR PGKC+RLY
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXX 531
+ + + TVPEIQR +A+ +L LK+LG+ ++ F ++ PPP
Sbjct: 429 EFER-FAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGA 487
Query: 532 XXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDK 590
+LT +G +MAEFPL PM SK ++ S + CS E++TI AM+ + +F P +
Sbjct: 488 IDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYRQ 546
Query: 591 QVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ AD R F + GDH+ +L V+ + E S +WC ++++ R + RA ++R QL
Sbjct: 547 RHQADVIRKKFAVEE-GDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLV 605
Query: 651 GLLERVEIEVTSN---LNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
LL+R EIE S+ +N + I++ + +GFF +A+ G Y TVK +++ S
Sbjct: 606 RLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSS 665
Query: 708 LA--QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
+ + P+WV++ E++ ++ +R VT ++PEWL E+APHYY+
Sbjct: 666 IMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYE 706
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 279/645 (43%), Positives = 394/645 (61%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
L E+R+ LPI YRD++L + ++QV+++VGETGSGK+TQ+PQYL+E G+ +G +G T+
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITE 99
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P QE G +G VGY +RF + S T +K+MT+G+LLRE+L++P L
Sbjct: 100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF---GSAPI 299
Y V++VDEAHER + TD++ GLLK +++ RS LKL+ISSAT+DA FS++F GS +
Sbjct: 160 QYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEV 219
Query: 300 ---FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
I GR +PV Y P ADY+ + TV ++H + PGDIL FLTGQEE+ A +
Sbjct: 220 SVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALD 279
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
+L+ S+ L + P+Y ++ + Q +F P+G RKVVLATNIAETS+TI GI
Sbjct: 280 LLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YVID G+ KVK YNP+T +SL++ P+SKASA+QRAGR+GR PGK +RLYT +Y
Sbjct: 338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEA- 396
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
+ PE++R+ L+ +L LK+LGI +++ FDF PPP G
Sbjct: 397 LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQG 456
Query: 537 ELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
LTK VG +AE P MLSKM+ S + CS+EIITI A+L V SIF RP
Sbjct: 457 NLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQV-QSIFSRPASAVAQQS 515
Query: 596 N--ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
A F + GD I +L Y + E + ++C + ++ R++KRA +R+QL +
Sbjct: 516 GRIAHRKFEVAE-GDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVA 574
Query: 654 -ERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL 712
++ I + S D++ + K IT+GFF A L +G Y + + IHP+S L L
Sbjct: 575 RKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTL-YTL 633
Query: 713 PR--WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
P+ +VVY EL+ TTK +M VT +K EWL E+APHYYQ V D
Sbjct: 634 PQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTVRD 678
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1270 (452.1 bits), Expect = 1.9e-129, P = 1.9e-129
Identities = 257/608 (42%), Positives = 375/608 (61%)
Query: 153 GETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 212
GETGSGKTTQ+PQYL+E G +QG + TQP E +LG VGY++R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 213 FEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF 272
F+D +SE T +K++TDGMLLRE +S+ L YS +++DEAHERT+ TD+LFG++K +
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 273 RSDL-----KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIV 327
R +L K+++ SAT+D + FS YF A + + GR++P+++ YTK P+ DY+ AA+V
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALV 185
Query: 328 TVLQIHV-TQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQ 386
+V QIH S DILVFLTGQEEIE + + + L +++ P+YA+LP Q
Sbjct: 186 SVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQ 245
Query: 387 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISK 446
++F+ P+G RKV++ATNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK
Sbjct: 246 LRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
Query: 447 ASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLV 506
A QRAGR+GR G C+RLYT + + K + TVPEIQR NLA+V+L L ++ + +++
Sbjct: 306 TQAWQRAGRAGREDSGICYRLYTENEFEK-FEKMTVPEIQRCNLASVLLQLLAMKVPNVL 364
Query: 507 NFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGELT--KVGRRMAEFPLDPMLSKMIVASDK 563
FDF+ P P +LT +GR+MA FPL+P +K I+ S K
Sbjct: 365 TFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPK 424
Query: 564 DKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECN 623
C++EI+TI ++LSV +S+ Y P ++ R F L + GDHI LL +Y +++
Sbjct: 425 FHCTEEILTIVSLLSV-DSVLYNPPSRRDEVQAMRKKF-LSSEGDHITLLNIYRTFKSLG 482
Query: 624 YSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSA 683
WC EN++ R+M A ++R QL + ++ + + S D+++I++ + F +A
Sbjct: 483 GDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSAA 542
Query: 684 KLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEI 743
+LQ +G+Y T Q V IHPSS L P VVY EL+ T+K YMR + + EWL E
Sbjct: 543 ELQPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYEA 602
Query: 744 APHYYQLK 751
AP Y++ K
Sbjct: 603 APDYFRRK 610
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 245/565 (43%), Positives = 360/565 (63%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LPI + +++++ V + V+VI+GETGSGK+TQ+ Q LH GYTK G + TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
QE+ V LG +VGY+IRFED T+ KT +KY+TDG+LLRE LS P L+ YSV+++
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 250 DEAHERTLSTDILFGLLKDLIKFR-SDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
DEAHER+L+TDIL GL+K L++ R S+ K+LI+SATLD EK S++F P+ +PG+ YP
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183
Query: 309 VEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS- 367
VEI Y+K YI++++ + IHV + GDIL+F+TGQ++IE L+ + R L
Sbjct: 184 VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
+ II P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YVID G+ K
Sbjct: 244 SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQ 303
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
+ YNP +GM SL V ISK A QRAGR+GRT PGKC+RLY L Y D D T+PEIQR
Sbjct: 304 RQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363
Query: 488 TNLANVVLILKSLGIDDL--VNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
T+LA VL LKSL + D+ + FDF+D P G +T++GR M
Sbjct: 364 TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTM 423
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF---YRPKDKQ-VHADNARMNF 601
++ PL+P LS+ ++ +++ C + +T+ AMLS ++ +P +K+ H +++ +
Sbjct: 424 SDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPN 483
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE---I 658
G GDHI LL+++ SW NY WC EN +QVR M +D+R QL +++++ +
Sbjct: 484 GSG-YGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL 542
Query: 659 EV------TSNLNDLDAIKKAITSG 677
EV +S+ +D ++KA+ G
Sbjct: 543 EVGADGRKSSSRDDYRKLRKALCVG 567
Score = 232 (86.7 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 60/175 (34%), Positives = 98/175 (56%)
Query: 586 RPKDKQ-VHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARD 644
+P +K+ H +++ + G GDHI LL+++ SW NY WC EN +QVR M +D
Sbjct: 467 KPSEKKRKHDEDSNLPNGSG-YGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKD 525
Query: 645 IRDQLEGLLERVE---IEV------TSNLNDLDAIKKAITSGFFPHSAK--LQKNGSYWT 693
+R QL +++++ +EV +S+ +D ++KA+ G A+ L+ NG Y T
Sbjct: 526 VRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNG-YRT 584
Query: 694 VK-HPQRVHIHPSSGLAQ----VLPRWVVYHELVLTTKEYMRQVTELKPEWLVEI 743
+ Q V +HPSS L+ ++P +VVYHEL+ TT+ +MR V + W+ I
Sbjct: 585 LSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 254/604 (42%), Positives = 377/604 (62%)
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
+G TQP +E G ++G EVGYSIRFED TSE T +K++TDG+L+RE L
Sbjct: 70 IGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALV 129
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSA 297
+P L YS++MVDEAHER++STDIL GLLK + K R +L+++ISSATL AE+F +F S
Sbjct: 130 DPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSST 189
Query: 298 ----------P------IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDI 341
P I + GR YP++I Y ++P DY+ A+ TVL +H + GDI
Sbjct: 190 LGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDI 249
Query: 342 LVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVV 401
LVFLTG++EIE A + + RT L S+ L+ P+++ L TE Q IFE P RKV+
Sbjct: 250 LVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVI 309
Query: 402 LATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGP 461
+TNIAE S+TI GI YV+D GF K+++YNP+TG+E+L PISKA+A QRAGR+GRT P
Sbjct: 310 FSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKP 369
Query: 462 GKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXX 521
GKCFRLYT +Y + D +PE+QR+NLA +L LK+LGID++++FDF+ PPP
Sbjct: 370 GKCFRLYTEESY-TSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTK 428
Query: 522 XXXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVG 580
+LTK +G RMAE +DPM++K +++++ C E++TIAAM S G
Sbjct: 429 ALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAG 488
Query: 581 NSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW-RECNYSTQWCYENYIQVRSM 639
++ + + ++ ++ R F G GDH+ L VY ++ + + +C+EN + ++M
Sbjct: 489 GDVWIQHEGERKQFESRRRKFAAGE-GDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTM 547
Query: 640 KRARDIRDQLEGLLERVEIEVTSNLNDL-----------DAIKKAITSGFFPHSAKLQKN 688
RA IR QL+ LER I V L + I++ +T+G+F H+A++Q +
Sbjct: 548 SRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQAD 607
Query: 689 GSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT-TKEYMRQVTELKPEWLVEIAPHY 747
G++ TV+ +H HPSS + WV++HE++ T K ++R +++++ WL+E AP +
Sbjct: 608 GTFQTVQGGTTLHAHPSSLMFNRKADWVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDF 667
Query: 748 YQLK 751
YQ+K
Sbjct: 668 YQVK 671
Score = 458 (166.3 bits), Expect = 3.3e-41, P = 3.3e-41
Identities = 93/180 (51%), Positives = 123/180 (68%)
Query: 118 SALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
S + L + LPI ++D LL V V V+VG+TGSGKTTQIPQ+L +AG+ GK
Sbjct: 9 SFIPALHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGK 68
Query: 178 -VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
+G TQP +E G ++G EVGYSIRFED TSE T +K++TDG+L+RE L
Sbjct: 69 LIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREAL 128
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+P L YS++MVDEAHER++STDIL GLLK + K R +L+++ISSATL AE+F +F S
Sbjct: 129 VDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSS 188
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
Identities = 249/632 (39%), Positives = 380/632 (60%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+++++K+LP++ R +L+ + ++I+ ETGSGKTTQIPQ+L AGY K G +G TQ
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P QE+ +G VGY++RFED TS T ++++TDG+LLRE + + L
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFR-----SDLKLLISSATLDAEKFSDYFGSA 297
YSV+++DEAHERT++ D+LFG++KD K R ++LK++++SAT+D + F +YF
Sbjct: 181 KYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCK 240
Query: 298 PIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIH-VTQSPGDILVFLTGQEEIETADE 356
++ + GR YPV + +TK DYI +VT+ IH T D+L+FLTGQEEIE+ +
Sbjct: 241 GMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQ 299
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
++ + + +L + +YA L Q + F PTP RKV+LATNIAETS+TI GI
Sbjct: 300 QIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGI 359
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
+ VID GF K KS+N G++ L ISKA A QRAGR+GR G C+R YT
Sbjct: 360 RCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDS- 418
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
D T PEI RTN ++VL L +L ID NFDF+DPP
Sbjct: 419 FADATQPEILRTNPTSMVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDALGAIKTGD 477
Query: 537 E--LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
+ +T +GR+M ++PLDP SK+++ + C +EI+++ ++LS + +F +K A
Sbjct: 478 DSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLS-SDHVFVSNSEKNEMA 536
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 654
A F + GDH+ LL V+N + + WC++NY+ +RS+ AR++R QL + E
Sbjct: 537 ALAHAKFQSKH-GDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISE 595
Query: 655 RVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGL-AQVLP 713
+ + + S+ +D++ +KK I +GFF + A LQ++G Y T R IHPSS L + P
Sbjct: 596 HLHLALNSS-DDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKP 654
Query: 714 RWVVYHELVLTTKEYMRQVTELKPEWLVEIAP 745
++++ E+V T + ++RQVTE+ EW+ E+ P
Sbjct: 655 SYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 1004 (358.5 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 223/576 (38%), Positives = 336/576 (58%)
Query: 86 FEDKIDFIRDSVI----DGENLDELHS--ELPDKSKEKSAL-EMLQEERKTLPIYPYRDE 138
F+ K++F R +V+ D E+ +E ++ S + +A + L + R+ LPIY ++D+
Sbjct: 131 FKQKLEFKRKTVVYKDQDDEDDEEENNTFNFSQNSFQLAATAQQLLQIREKLPIYHHKDK 190
Query: 139 LLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQE 198
+++ +N QV +++GETGSGK+TQIPQ+L K +G TQP +E
Sbjct: 191 IIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN-PKM--IGVTQPRRVAAASLAARVSEE 247
Query: 199 MGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLS 258
G KLG +VGY +RF + T+ +T LKY+TDGMLLREI+ + NL YS +++DEAHERT+
Sbjct: 248 YGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTIL 307
Query: 259 TDILFGLLKDLIKF--RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKA 316
TD++ G LK +I R DLK+++ SATL+AE FS++FG+API I G+ YPV Y A
Sbjct: 308 TDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDA 367
Query: 317 PEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICP 376
D +D I +++QI++ + GD+L FL GQEEI+ + L+ L + ++ P
Sbjct: 368 ESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLP 427
Query: 377 IYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGM 436
+YA L Q+KIFE P+G RKV+LATNIAETS+T+ G+KYVID G K+K + G+
Sbjct: 428 LYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGL 487
Query: 437 ESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLI 496
+LL PIS+ASA QRAGR+GR GK FRLY Y + EI+R ++ VL
Sbjct: 488 STLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMA-LPKQQESEIKRNDIILPVLT 546
Query: 497 LKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSK 556
LK LG+DDL+N+ +++ P G++T +G +M+ PL P LS
Sbjct: 547 LKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSV 606
Query: 557 MIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD-NARMNFHLGNV-GDHIALLR 614
+++ + + +I IA+ LSV N I + + + R + LGN+ GD IAL
Sbjct: 607 VLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPLGNIHGDLIALYE 666
Query: 615 VYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ +++ +WC E + K I+ QL+
Sbjct: 667 YFQAYQA--QGKEWCKELAFSFKGFKNVEKIKYQLQ 700
Score = 133 (51.9 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL L +++ E T D+ +I K+ G+ ++A + S+ T Q + +HPSS
Sbjct: 721 QLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPSST 780
Query: 708 LAQVLPRW--VVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
L P ++Y E V TTK Y R V+ ++ WL EIAPH
Sbjct: 781 LFGK-PNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAPH 820
Score = 43 (20.2 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 21/73 (28%), Positives = 31/73 (42%)
Query: 55 EQEAWEEHQMGKASLKYGSK-NKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPD- 112
+Q +EH S K K NKN+ ND E + I V + D++H +
Sbjct: 3 DQIKGDEHNQVNGSKKRKRKRNKNKKNDNNTPVETS-EPIPTPVYE----DDIHRQNKKF 57
Query: 113 KSKEKSALEMLQE 125
K E+ +E QE
Sbjct: 58 KFNEEGEMEKPQE 70
Score = 39 (18.8 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
H ++ EY + EW E+A + K+VE
Sbjct: 658 HGDLIALYEYFQAYQAQGKEWCKELAFSFKGFKNVE 693
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 228/554 (41%), Positives = 345/554 (62%)
Query: 207 VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
VGY++RF+D TSE T +K++TDGMLLRE +S+ L YS +++DEAHERT+ TD+LFG++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 267 KDLIKFRSDL-----KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADY 321
K K R +L K+++ SAT+D + FS YF AP+ + GR++P+++ YTK P+ DY
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 322 IDAAIVTVLQIHV-TQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYAN 380
+ AA+V+V QIH S DILVFLTGQEEIE + + + L +++ P+YA+
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYAS 240
Query: 381 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLL 440
LP Q ++F+ P+G RKV+++TNIAETS+TI GIKYV+D G K K YNP +G+E L
Sbjct: 241 LPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLA 300
Query: 441 VHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSL 500
V +SK A QR GR+GR G C+RLYT + K D TVPEIQR NLA+V+L L ++
Sbjct: 301 VQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAM 359
Query: 501 GIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGELT--KVGRRMAEFPLDPMLSKM 557
+ +++ FDF+ P P +LT +GR+MA FPL+P +K
Sbjct: 360 KVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKT 419
Query: 558 IVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYN 617
I+ S K C++EI+TI ++LSV +S+ + P ++ R F + + GDH+ LL +Y
Sbjct: 420 ILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLNIYR 477
Query: 618 SWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSG 677
+++ + WC EN++ ++M ++R QL + ++ + + S+ D++++++ +
Sbjct: 478 TFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHS 537
Query: 678 FFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKP 737
F +A+LQ +G+Y T Q V IHPSS L P VVY EL+ T K YMR + +
Sbjct: 538 LFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDA 597
Query: 738 EWLVEIAPHYYQLK 751
+WL E AP Y++ K
Sbjct: 598 QWLYEAAPEYFRRK 611
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 998 (356.4 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 227/587 (38%), Positives = 349/587 (59%)
Query: 89 KIDFIRDSVIDGENLDELHSE----LPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVN 144
KI DS +G+++ + S L KS + A ++L+ R+TLP+Y ++ E++ +
Sbjct: 38 KIVKFNDSG-EGDHVSDQRSNKENVLTYKSLKSRASDLLKM-RETLPVYQHKREIMSYIE 95
Query: 145 EYQVLVIVGETGSGKTTQIPQYLHEAGYT--KQGKVGCTQPXXXXXXXXXXXXXQEMGVK 202
V V++GETGSGK+TQIPQ++ E Y K G + TQP QE G K
Sbjct: 96 SNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCK 155
Query: 203 LGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDIL 262
LG +VGYS+RF++ T+ +T LKY+TDGMLLRE++ +L YSV+++DEAHERT+ TD++
Sbjct: 156 LGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLI 215
Query: 263 FGLLKDLIKF-RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADY 321
G LK LI+ R DL++++ SATL AEKFS++F +API + GR++ V+ +Y KAP D
Sbjct: 216 LGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDI 275
Query: 322 IDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKI-AELII-CPIYA 379
+DA I +QI+ + GDIL FL GQEEI+ A I++ + + + LI+ P+YA
Sbjct: 276 VDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYA 335
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
LP Q+ +F P RKVV +TNIAETS+TI G+K+V+D G KVK + + G+ +L
Sbjct: 336 ALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATL 395
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
L PIS+ASAMQR+GR+GR GK FRLY +Y K + + PEI R+++ + VL+LK
Sbjct: 396 LTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKR 454
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
G+DDL+N+ + + P G++TK G++MA PL P LS +++
Sbjct: 455 YGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLI 514
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF-HLGN-VGDHIALLRVYN 617
+ + C ++I I + LSV N + +++ + R++ + G GD I L +++
Sbjct: 515 KASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFD 574
Query: 618 SW-----RECNYSTQ---WCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ + + S++ WC I +R K +RDQL +R+
Sbjct: 575 IYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRL 621
Score = 131 (51.2 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 628 WCYENYIQVRSMKRARDIRDQLEGLLERV------EIEVTSNLND----LDAIKKAITSG 677
WC I +R K +RDQL +R+ E E + + + + I K +G
Sbjct: 593 WCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTG 652
Query: 678 FFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLA--QVLPRWVVYHELVLTTKEYMRQVTEL 735
F ++A + SY TV + + IHPSS L + P ++Y E V TTK Y R V+ +
Sbjct: 653 FIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-IMYTEYVFTTKGYARNVSRI 711
Query: 736 KPEWLVEI 743
+ WL E+
Sbjct: 712 ELSWLQEV 719
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 213/352 (60%), Positives = 274/352 (77%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G DE S
Sbjct: 322 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQG---DEEPS 378
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P S + E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 379 A-PPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 437
Query: 169 EAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT +G K+ CTQP +EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 438 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 497
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D
Sbjct: 498 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDT 557
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 558 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 617
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARK 399
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARK
Sbjct: 618 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 242/626 (38%), Positives = 367/626 (58%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-GKVGCT 181
L ++K LPI YR++LL AV + Q+ +++G TG GKTTQIPQ+L+EAG+ Q G +GCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QP E+ G GYSI+F+ SEKT +KYMTDG+LL EI +P L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI-- 299
E YS++++DE HERTLSTD+L G+LK +++ R+D +L++SSA++DA K S +FG +
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
I G+ +PVE + + P +Y+D+AI TV+ I+ T PGDILVFL+G++EIE + ++
Sbjct: 198 MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIE 257
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
L+ P++A L + Q ++F RKV+ +TNIAETS+TIDGI YV
Sbjct: 258 DSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYV 317
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
+D GF+K + YNP T L+ PISK+SA+QR+GR+GRT GK FRLYT Y M +
Sbjct: 318 VDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSL-MKE 376
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+I +++ +VL LK LG+ +++ F F PP G LT
Sbjct: 377 EFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLT 436
Query: 540 K-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH-ADNA 597
+G +++ LD +SK ++ S++ C+ EI++IA++L+ G +FY P + A A
Sbjct: 437 DPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGE-VFYNPTSSSKNDAFVA 495
Query: 598 RMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE 657
+F N GD I L V+ S+ QWC +NY+ +++++A DIR L L +
Sbjct: 496 HSSF-FANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFS 554
Query: 658 IEVTSNL--NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
I L +D I K + GF + A LQ +GSY T+ Q V + SS L + W
Sbjct: 555 IPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPW 613
Query: 716 VVYHELVLT-TKEYMRQVTELKPEWL 740
++Y V + T+ +++ +++++ WL
Sbjct: 614 IMYSSAVESETQIFVKNISKIESFWL 639
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 730 (262.0 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 164/475 (34%), Positives = 269/475 (56%)
Query: 285 LDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILV 343
L E+ S+ G A + I GR++PV+ Y+ P D++DAA+ + QIH + PGDILV
Sbjct: 349 LQKEEKSEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILV 407
Query: 344 FLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLA 403
FLTGQE +E + ++ G+ + ++ + P++A LP Q ++F P P RK++LA
Sbjct: 408 FLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILA 467
Query: 404 TNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGK 463
TNIAETS+T+ G++YV+D G +K+K + R G++SLLV PISK++A+QR GR+GR PG+
Sbjct: 468 TNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQ 527
Query: 464 CFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXX 523
C+RLYT +Y +D+ PEI R +L+ +L +K+ G+D+++ F F+ PP
Sbjct: 528 CYRLYTEKDYLA-LDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKAL 586
Query: 524 XXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVA-SD-KDKCSDEIITIAAMLSVGN 581
G++++ G +A+ PL P L ++++A SD C ++I I + LSV N
Sbjct: 587 LQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVEN 646
Query: 582 SIFYRP--KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQ-WCYENYIQVRS 638
IF ++K+ A+ AR + + GDH+ +L ++ N + W + + R+
Sbjct: 647 -IFLNTTSEEKKEAAEAARRDLYRRE-GDHLTMLATVRAYASENTDRKAWAERHLVSHRA 704
Query: 639 MKRARDIRDQLEGLLERVEI---EVTSNLNDLDAIK--------KAITSGFFPHSAKLQK 687
M+ D+R QL + ++ S +D +I+ K+ GF ++A+L
Sbjct: 705 MQSVMDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVP 764
Query: 688 NGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVE 742
+GSY TV Q V IHPSS L ++Y+E V T + Y R V+ ++ +W+ E
Sbjct: 765 DGSYRTVVGNQTVAIHPSSVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 224 (83.9 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 52/143 (36%), Positives = 80/143 (55%)
Query: 167 LHEAGYTKQGKVG-C---TQPXXXXXXXXXXXXXQEMGVKLGH-----EVGYSIRFEDCT 217
+ E G K+ VG C TQP +EMG LG +VGYS+RF+
Sbjct: 198 VQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSV 257
Query: 218 SEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD-- 275
S T +K++T+GMLL+E+L +P L YS ++VDE HER ++ D++ G L++L+ + +
Sbjct: 258 SPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGR 317
Query: 276 ----LKLLISSATLDAEKFSDYF 294
LK ++ SAT D E ++F
Sbjct: 318 GGVPLKAVVMSATADMESLQEFF 340
Score = 144 (55.7 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
K +ML E RK LPI+ + DE+ Q + + V++++GETGSGK+TQIPQ+L + + +
Sbjct: 134 KKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWCRPT 193
Query: 177 KVGCTQ 182
K Q
Sbjct: 194 KTTIVQ 199
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 244/642 (38%), Positives = 364/642 (56%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPX 184
E + LP+ R E+ +A+ + QV+++ GETGSGKTTQ+P+ EAG QG +G TQP
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 185 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
E+ LG VGY +RF D T +++K MTDG+LL E ++ L+ Y
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQY 188
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
L+VDEAHER+L+ D L G LK L+ R DLKL+I+SAT+D E+FS +F +API ++PG
Sbjct: 189 DTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPG 248
Query: 305 RRYPVEIHY----TKAPEADYID-----AAIVTVLQIHVTQSPGDILVFLTGQEEI-ETA 354
R YPVEI Y + E+D + A + V ++H ++ GDIL+FL+G+ EI +TA
Sbjct: 249 RTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIRDTA 307
Query: 355 DEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTID 414
+ + KH A+ + P+Y+ L Q KIF+P G R++VLATN+AETSLT+
Sbjct: 308 ESLRKHHP-------ADCEVLPLYSRLTVSEQEKIFKP--HGRRRIVLATNVAETSLTVP 358
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
GI+ VID G++++ Y+ R+ ++ L + IS+ASA QRAGR GR GPG C RLY+ ++
Sbjct: 359 GIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDF- 417
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXX 534
+ + T PEI RTNLA V+L +K+L + D+ F F++PP
Sbjct: 418 LNRPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDA 477
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G LT++GRR+A P+DP L ++++A ++ C E+ I A LSV + RP DK A
Sbjct: 478 QGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPR-ERPADKAQAA 536
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWRECNYST------QWCYENYIQVRSMKRARDIRDQ 648
D F + D +A+L ++N + E Q+C +N++ M+ RDI Q
Sbjct: 537 DQKHARFRHPD-SDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQ 595
Query: 649 LEGLLERVEIEVTSNLNDLDA----IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHP 704
+ LE V+ E+ N + A I +A+ +G H Q Y V+ Q+ I P
Sbjct: 596 I---LEVVKGELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEYVGVRG-QKFQIFP 651
Query: 705 SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
S L + P W++ E V T++ Y R V ++PEW+ + H
Sbjct: 652 GSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWIEKCGAH 693
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 610 (219.8 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 133/382 (34%), Positives = 215/382 (56%)
Query: 386 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPIS 445
Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L V PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 446 KASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDL 505
K+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK L I D+
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 506 VNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDK 565
+ F ++DPP G +T++G M EFPL P L+ ++ +
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLD 458
Query: 566 CSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRVYNSWRE 621
C D ++ IAAMLSV N +F RP D + + + + L G D L ++ +
Sbjct: 459 CEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS 517
Query: 622 CNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAIKKAITS 676
WC +++I R + A + QL L+ +++ + T + +++ + +
Sbjct: 518 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCA 577
Query: 677 GFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKEYMRQVT 733
G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK Y R V
Sbjct: 578 GYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVC 637
Query: 734 ELKPEWLVEIAP--HYYQLKDV 753
++ EW+ ++ P H + D+
Sbjct: 638 PIRYEWVRDLLPKLHEFNAHDL 659
Score = 437 (158.9 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 91/192 (47%), Positives = 123/192 (64%)
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
+G TQP +EM LG +VGY +RF+DC+S++T +KYMTDG LL+ IL
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD-----LKLLISSATLDAEKFSD 292
+PNL +SV+++DEAHERTL+TDILFGLLK L + +S LK+++ SAT++ K S
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 121
Query: 293 YFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAIVTVLQIHVTQSPGDILVFLT 346
+FG+ PIF IPGR YPV + P YI A + + IH+ + GDILVFLT
Sbjct: 122 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 181
Query: 347 GQEEIETADEIL 358
GQ EIE + E+L
Sbjct: 182 GQFEIEKSCELL 193
Score = 200 (75.5 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 54/157 (34%), Positives = 78/157 (49%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 102 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 161
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 162 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 221
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
++ T Q + T K + + T LTI GI
Sbjct: 222 SMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
Score = 38 (18.4 bits), Expect = 5.1e-38, Sum P(2) = 5.1e-38
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 350 EIETADE-ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFE 391
E ET E I+ H + +K+ I+CPI +L K+ E
Sbjct: 612 EQETKLEWIIFHEVL-VTTKVYARIVCPIRYEWVRDLLPKLHE 653
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 243/681 (35%), Positives = 379/681 (55%)
Query: 89 KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
K + R++V D LD S + + +++ ++ E LP+ RD++ QA+ +QV
Sbjct: 48 KNESARNAVFDEIALDIAQSMMVVEQRKQQMPKI--EYPALLPVSQKRDDIAQAIAHHQV 105
Query: 149 LVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVG 208
+++ GETGSGKTTQ+P+ E G K G +G TQP +EM +LG VG
Sbjct: 106 VIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVG 165
Query: 209 YSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKD 268
Y +RF D S++T +K MTDG+LL EI ++ L Y +++DEAHER+L+ D + G LK
Sbjct: 166 YKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQ 225
Query: 269 LIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYT-------KAPEADY 321
L+ R DLK++I+SAT+D E+FS +F +API ++ GR YPVE+ Y + D
Sbjct: 226 LLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQ 285
Query: 322 IDAAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTRGLGSKIAELIICPIYAN 380
++ V ++ + GDIL+F+ G+ EI +TAD + K R E++ P+YA
Sbjct: 286 LEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKRNLRD-----TEIV--PLYAR 337
Query: 381 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLL 440
L Q KIF+P R++VLATN+AETSLT+ GIKYVIDPG +++ Y+ RT ++ L
Sbjct: 338 LSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 395
Query: 441 VHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSL 500
+ PIS+ASA QR GR GRT G C RLY+ ++ + T PEI RTNLA+V+L + +L
Sbjct: 396 IEPISQASANQRKGRCGRTEEGICIRLYSEEDF-LSRPEFTDPEILRTNLASVILQMTAL 454
Query: 501 GIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX-----GELTKVGRRMAEFPLDPMLS 555
G+ D+ F F++ P LT+ G+++A P+DP L+
Sbjct: 455 GLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLA 514
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRV 615
+M++ + K C E++ IA+ LS+ + RP DKQ AD+ F+ + D + L+ +
Sbjct: 515 RMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQSADDKHRRFNHED-SDFLTLVNL 572
Query: 616 YN---SWRECNYSTQW---C---YENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLND 666
++ ++ S Q+ C Y NY++VR + D+ QL + ++
Sbjct: 573 WHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQ---DVYTQLHQSTREMGFKLNDEPGS 629
Query: 667 LDAIKKAITSGFFPH-SAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTT 725
A+ AI G H K Q+ Y ++ R +I P+SGL + P+WV+ ELV T+
Sbjct: 630 YHAVHSAILVGLLSHIGMKDQEKNEYHGARNA-RFNIFPASGLFKKQPKWVMSAELVETS 688
Query: 726 KEYMRQVTELKPEWLVEIAPH 746
K + R V +++P+W+ +A H
Sbjct: 689 KLWARVVAKIEPDWIEPLAKH 709
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 243/681 (35%), Positives = 379/681 (55%)
Query: 89 KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
K + R++V D LD S + + +++ ++ E LP+ RD++ QA+ +QV
Sbjct: 48 KNESARNAVFDEIALDIAQSMMVVEQRKQQMPKI--EYPALLPVSQKRDDIAQAIAHHQV 105
Query: 149 LVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVG 208
+++ GETGSGKTTQ+P+ E G K G +G TQP +EM +LG VG
Sbjct: 106 VIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVG 165
Query: 209 YSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKD 268
Y +RF D S++T +K MTDG+LL EI ++ L Y +++DEAHER+L+ D + G LK
Sbjct: 166 YKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQ 225
Query: 269 LIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYT-------KAPEADY 321
L+ R DLK++I+SAT+D E+FS +F +API ++ GR YPVE+ Y + D
Sbjct: 226 LLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQ 285
Query: 322 IDAAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTRGLGSKIAELIICPIYAN 380
++ V ++ + GDIL+F+ G+ EI +TAD + K R E++ P+YA
Sbjct: 286 LEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKRNLRD-----TEIV--PLYAR 337
Query: 381 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLL 440
L Q KIF+P R++VLATN+AETSLT+ GIKYVIDPG +++ Y+ RT ++ L
Sbjct: 338 LSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 395
Query: 441 VHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSL 500
+ PIS+ASA QR GR GRT G C RLY+ ++ + T PEI RTNLA+V+L + +L
Sbjct: 396 IEPISQASANQRKGRCGRTEEGICIRLYSEEDF-LSRPEFTDPEILRTNLASVILQMTAL 454
Query: 501 GIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX-----GELTKVGRRMAEFPLDPMLS 555
G+ D+ F F++ P LT+ G+++A P+DP L+
Sbjct: 455 GLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLA 514
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRV 615
+M++ + K C E++ IA+ LS+ + RP DKQ AD+ F+ + D + L+ +
Sbjct: 515 RMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQSADDKHRRFNHED-SDFLTLVNL 572
Query: 616 YN---SWRECNYSTQW---C---YENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLND 666
++ ++ S Q+ C Y NY++VR + D+ QL + ++
Sbjct: 573 WHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQ---DVYTQLHQSTREMGFKLNDEPGS 629
Query: 667 LDAIKKAITSGFFPH-SAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTT 725
A+ AI G H K Q+ Y ++ R +I P+SGL + P+WV+ ELV T+
Sbjct: 630 YHAVHSAILVGLLSHIGMKDQEKNEYHGARNA-RFNIFPASGLFKKQPKWVMSAELVETS 688
Query: 726 KEYMRQVTELKPEWLVEIAPH 746
K + R V +++P+W+ +A H
Sbjct: 689 KLWARVVAKIEPDWIEPLAKH 709
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 224/640 (35%), Positives = 370/640 (57%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LP+ R+++ +A++ QV++I GETGSGKTTQ+P+ E G +G +G TQP
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
+E+ LG VG+ +RF D ++ +K MTDG+LL E+ S+ L+ Y +++
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 250 DEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 309
DEAHER+L+ D + G LK ++K R DLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 310 EIHY---TKAPEADY--IDAAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTR 363
E Y + EAD I+ V ++ V + GDIL+F+ G+ EI +TA+++ + R
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQLNRRNYR 314
Query: 364 GLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPG 423
E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YVIDPG
Sbjct: 315 D-----TEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPG 365
Query: 424 FSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
+++ Y+ RT ++ L + PIS+ASA QR GR GR GPG C RLY +++ + T P
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFN-NRPAFTDP 424
Query: 484 EIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGE--LTK 540
EI RTNLA+V+L + ++G+ D+ F FI+PP P G LT
Sbjct: 425 EILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTP 484
Query: 541 VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMN 600
+GR++++ P+DP L++M++ S + C +E++ IA+ LS+ + RP DK+ +D A
Sbjct: 485 LGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRR 543
Query: 601 FHLGNVGDHIALLRVYNSWRECNY---STQW---CYENYIQVRSMKRARDIRDQLEGLLE 654
F D ++ + ++ +E ++Q+ C + Y+ ++ +D+ QL+ +
Sbjct: 544 F-ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVH 602
Query: 655 RVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPR 714
++ + + DA+ +A+ SG H N Y ++ ++ + P S LA+ P+
Sbjct: 603 DLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKGPK 661
Query: 715 WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
W++ EL+ T+K + R +++PEWL +A H + +E
Sbjct: 662 WIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLE 701
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 224/640 (35%), Positives = 370/640 (57%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LP+ R+++ +A++ QV++I GETGSGKTTQ+P+ E G +G +G TQP
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
+E+ LG VG+ +RF D ++ +K MTDG+LL E+ S+ L+ Y +++
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 250 DEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 309
DEAHER+L+ D + G LK ++K R DLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 310 EIHY---TKAPEADY--IDAAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTR 363
E Y + EAD I+ V ++ V + GDIL+F+ G+ EI +TA+++ + R
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQLNRRNYR 314
Query: 364 GLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPG 423
E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YVIDPG
Sbjct: 315 D-----TEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPG 365
Query: 424 FSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
+++ Y+ RT ++ L + PIS+ASA QR GR GR GPG C RLY +++ + T P
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFN-NRPAFTDP 424
Query: 484 EIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGE--LTK 540
EI RTNLA+V+L + ++G+ D+ F FI+PP P G LT
Sbjct: 425 EILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTP 484
Query: 541 VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMN 600
+GR++++ P+DP L++M++ S + C +E++ IA+ LS+ + RP DK+ +D A
Sbjct: 485 LGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRR 543
Query: 601 FHLGNVGDHIALLRVYNSWRECNY---STQW---CYENYIQVRSMKRARDIRDQLEGLLE 654
F D ++ + ++ +E ++Q+ C + Y+ ++ +D+ QL+ +
Sbjct: 544 F-ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVH 602
Query: 655 RVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPR 714
++ + + DA+ +A+ SG H N Y ++ ++ + P S LA+ P+
Sbjct: 603 DLKWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKGPK 661
Query: 715 WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
W++ EL+ T+K + R +++PEWL +A H + +E
Sbjct: 662 WIMAAELMETSKLFARCCAKIEPEWLEPLAAHLIKKNHLE 701
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 226/634 (35%), Positives = 353/634 (55%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LP+ + ++L+A+ ++QV+++ GETGSGKTTQ+P+ E G +G +G TQP
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
+E+ + G +GY +RF D S+ T++K MTDG+LL EI + L Y +++
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196
Query: 250 DEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 309
DEAHER+L+ D L G LK+L+ R DLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 310 EIHYTK-APEADYIDA----AIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTR 363
E+ Y EAD + AI + +S GDIL+F++G+ EI +TAD + K
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK---- 312
Query: 364 GLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPG 423
L + E++ P+YA L Q ++F+ R++VLATN+AETSLT+ GIKYVIDPG
Sbjct: 313 -LNLRHTEIL--PLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPG 367
Query: 424 FSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
+++ Y+ RT ++ L + PIS+ASA QR GR GR G C RLY+ ++ + T P
Sbjct: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDP 426
Query: 484 EIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXX-----XXXXXXXXXXGEL 538
EI RTNLA+V+L + +LG+ D+ F F++ P +L
Sbjct: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486
Query: 539 TKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNAR 598
T +GR++++ P+DP L++M++ + K C E + I + LS+ + RP DKQ +D
Sbjct: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQASDEKH 545
Query: 599 MNFHLGNVGDHIALLRVYNSWRE------CNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
FH D +A + ++N E N + C +Y+ ++ +DI QL +
Sbjct: 546 RRFH-DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL 712
++ + I V S + I A+ +G H + +T R I P SGL +
Sbjct: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664
Query: 713 PRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
P+WV+ ELV T++ + R + PEW+ +A H
Sbjct: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 226/699 (32%), Positives = 378/699 (54%)
Query: 77 NQSNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
N S++ Y E D D + ++ E+L EL+ D S L +ER+ LPI+
Sbjct: 10 NSSSEKRYFPESLDSSDGDEEGILACEDL-ELNPF--DGLPYSSRYYKLLKEREDLPIWK 66
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT---KQGKVGCTQPXXXXXXXX 191
+ ++ + + Q++++ G+ GK++Q+PQ+ E + + G V CTQ
Sbjct: 67 EKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVCTQVHKPTAVQL 126
Query: 192 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDE 251
EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P L SY V+++D+
Sbjct: 127 ALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGSYGVIILDD 186
Query: 252 AHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEI 311
HER+++TD+L GLLKD++ R +LKL+I+S+ K S Y+G+ P+ ++ + +PVE
Sbjct: 187 IHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPLIQVKNK-HPVEA 245
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAE 371
Y + + ++ + + +IH + GDI+VFL +++IE A EI+ L + E
Sbjct: 246 VYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGE 305
Query: 372 LIICPIYANLPTELQAKIFEPTPEGA-------RKVVLATNIAETSLTIDGIKYVIDPGF 424
L++ P+Y P E + +F+P E R+VVL + E+ + + +K+VID G
Sbjct: 306 LVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSGESLICSNTVKFVIDVGV 361
Query: 425 SKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPE 484
+ K YNPR +SL+ PIS++ A R + GK F LY+ +DM E
Sbjct: 362 ERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSEEFASRDMQPLKPAE 421
Query: 485 IQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRR 544
+Q NL ++VL +K + I L + DF++ P G L++ G
Sbjct: 422 MQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGII 481
Query: 545 MAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLG 604
M+EFPLDP LSK I+AS + C DE++TIAAM++ N + P+ + A + F L
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEEAALSCWKTF-LH 540
Query: 605 NVGDHIALLRVYNSWRECNYST-------QWCYENYIQVRSMKRARDIRDQLEGLLERVE 657
GDH L+ +Y ++++ + +WC++ ++ +++ A IR +L +++R+E
Sbjct: 541 PDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAELLEIIKRIE 600
Query: 658 IEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSS--GLA 709
+ T S N L+ IKKA+ SG+F A+ + G+Y + H Q +HP S +A
Sbjct: 601 LPYTEPAFGSKENTLN-IKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLHPLSCYSVA 659
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+ +P WV++H+ + Y+R +E+ PE +++AP YY
Sbjct: 660 RKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY 698
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 228/699 (32%), Positives = 376/699 (53%)
Query: 77 NQSNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
N S + Y E D D + V+ E+L EL+ D S L +ER+ LPI+
Sbjct: 10 NASPEKRYFPESLDSSDGDEEGVLACEDL-ELNPF--DGLPYSSRYYKLLKEREELPIWK 66
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPXXXXXXXX 191
+ ++++ + QV+V+ G++ GK++Q+PQ+ E + + + G V CTQ
Sbjct: 67 EKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQAHKQTAVQL 126
Query: 192 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDE 251
EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P L SY V+++D+
Sbjct: 127 ALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDD 186
Query: 252 AHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEI 311
HER+L+TD+L GLLKD++ R +LKL+++ + L K S Y+G P+ ++ + +PVE+
Sbjct: 187 VHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK-HPVEV 245
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAE 371
Y + D ++ I + +IH + GD++VFL +++IE E++ L + +
Sbjct: 246 VYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVGD 305
Query: 372 LIICPIYANLPTELQAKIFEPTPEGA-------RKVVLATNIAETSLTIDGIKYVIDPGF 424
L++ P+Y P E + +F P E R+VVL T+ E+ + +K+VID G
Sbjct: 306 LVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGL 361
Query: 425 SKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPE 484
+ + YNPR SL++ PIS++ A R G + GK F LYT KDM E
Sbjct: 362 ERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAE 421
Query: 485 IQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRR 544
+Q NL ++VL +K + I L DF++ P G L++ G
Sbjct: 422 MQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGII 481
Query: 545 MAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLG 604
M+EFPLDP LSK I+AS + C DE++TIAAM++ + + P + A F L
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTF-LH 540
Query: 605 NVGDHIALLRVYNSWREC--NYSTQ-----WCYENYIQVRSMKRARDIRDQLEGLLERVE 657
GDH L+ VYN++++ N + + WC++ ++ +++ A IR +L +++R+E
Sbjct: 541 PEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIE 600
Query: 658 IEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSSG--LA 709
+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q +HP S +
Sbjct: 601 LPYAEPAFGSKENGLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSIT 659
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+ +P WV++H+ ++ Y+R + + PE +++ P YY
Sbjct: 660 KKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 838 (300.0 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 192/508 (37%), Positives = 275/508 (54%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXX 186
R LPI +L+ + + L+++GETGSGK+TQ+PQ AG G + TQP
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 187 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
EMG +G VGY +RFE+ T KT ++YMTDG++LR+ L P L+ YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSDYFGSAPIFKI 302
+++DEAHER+L +D+L +L+ R + L+L+I SATL AEKF YF +A + +
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337
Query: 303 PGRRYPVEIHYTKAP------EADYIDAAIVTVLQIHVTQSPG-DILVFLTGQEEIETAD 355
GR +P+E+ + DY+ A++ V +H+T+ G DILVFLTG EEIE
Sbjct: 338 AGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
L L + L+ P+YA L E Q + F TP+GARKV+++TNIAETS+TI G
Sbjct: 398 SQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPG 457
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I+ VID G K K + ++ L VH +SKA A QRAGR+GR PGKC+RLY+ ++HK
Sbjct: 458 IRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHK 517
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX 535
+N +PEI R NL+ L L LG+ + IDPP
Sbjct: 518 FEAEN-MPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPV 576
Query: 536 GE------LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD 589
LT++G +PL P ++++ + K+ C E I I A + +++F D
Sbjct: 577 NSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQT-DALFSGAGD 635
Query: 590 KQVHAD--NARMNFHLGNVGDHIALLRV 615
+ AD R F GDHI LL++
Sbjct: 636 SKSDADVDRIRRRFETRE-GDHITLLKL 662
Score = 127 (49.8 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 38/126 (30%), Positives = 68/126 (53%)
Query: 620 RECNYSTQ-WCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIK--KAITS 676
RE N + + +C +N I + +K A I +QL+ + +E +VT + D +K KA+
Sbjct: 692 REYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIA--IEQKVTFSTCGADFMKMRKALAL 749
Query: 677 GFFPHSAKLQKNGS-YWTVKHPQ-RVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTE 734
G F +S + + Y + +P + IHPSS L++ P ++V+ EL+ T + QVT
Sbjct: 750 GMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTL 809
Query: 735 LKPEWL 740
+ +W+
Sbjct: 810 IDGDWV 815
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 229/704 (32%), Positives = 381/704 (54%)
Query: 72 GSKNKNQSNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKT 129
G + N S++ Y E D D + V+ E+L EL+ D S L +ER+
Sbjct: 5 GLECPNSSSEKRYFPESLDSSDGDEEEVLACEDL-ELNPF--DGLPYSSRYYKLLKERED 61
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPXXX 186
LPI+ + ++ + + Q++++ G+ GK+ Q+PQ+ E + + + G V CTQ
Sbjct: 62 LPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICTQVHKQ 121
Query: 187 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P L SY V
Sbjct: 122 TVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSYGV 181
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
+++D+ HER+++TD+L GLLKD++ R +LKL+I+S+ K + Y+G+ P+ ++ +
Sbjct: 182 IILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIEVKNK- 240
Query: 307 YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG 366
+PVE+ Y + D ++ + + +IH + GDI+VFL +++IE E + ++ L
Sbjct: 241 HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETV-YQGSNLN 299
Query: 367 SKIAELIICPIYANLPTELQAKIFEPTPEGA-------RKVVLATNIAETSLTIDGIKYV 419
+ EL++ P+Y P E + +F+P E R+VVL T+ E + + +++V
Sbjct: 300 PDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFV 355
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
ID G + K YNPR SL++ PIS++ A R G + GK F LYT KDM
Sbjct: 356 IDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTP 415
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
E+Q NL ++VL +K + I L + DF++ P G L+
Sbjct: 416 LKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLS 475
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
+ G M+EFPLDP LSK I+AS + C DE++TIAAM++ N + P + A
Sbjct: 476 EFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWK 535
Query: 600 NFHLGNVGDHIALLRVYNSWREC--NYSTQ-----WCYENYIQVRSMKRARDIRDQLEGL 652
F L GDH L+ +Y ++++ N S++ WC + ++ +++ A IR +L +
Sbjct: 536 TF-LHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEI 594
Query: 653 LERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSS 706
++R+E+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q +HP S
Sbjct: 595 IKRIELPYAEPAFGSKENTLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLS 653
Query: 707 G--LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
G + + +P WV++H+ ++ Y+R +E+ PE +++ P YY
Sbjct: 654 GYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 226/702 (32%), Positives = 377/702 (53%)
Query: 74 KNKNQSNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLP 131
++ N S + Y E D D + V+ E+L EL+ D S L +ER+ LP
Sbjct: 14 EHPNASPEKRYFPESLDSSDGDEEGVLACEDL-ELNPF--DGLPYSSRYYKLLKEREELP 70
Query: 132 IYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPXXXXX 188
I+ + ++++ + QV+++ G++ GK++Q+PQ+ E + + + G V CTQ
Sbjct: 71 IWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQVHKQTA 130
Query: 189 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLM 248
EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P L SY V++
Sbjct: 131 VQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVII 190
Query: 249 VDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
+D+ HER+L+TD+L GLLKD++ R +LKL+I+ + + S Y+G+ P+ ++ + +P
Sbjct: 191 LDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLEVRNK-HP 249
Query: 309 VEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSK 368
VE+ Y + D ++ + + +IH + GD++VFL +++IE EI+ L
Sbjct: 250 VEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPD 309
Query: 369 IAELIICPIYANLPTELQAKIFEPTPE-------GARKVVLATNIAETSLTIDGIKYVID 421
+ EL++ P+Y P E + +F P E R+VVL T+ E+ + +++VID
Sbjct: 310 VGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVID 365
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
G + + YNPR SL++ PIS++ A R G + GK F LYT KDM
Sbjct: 366 VGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLK 425
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKV 541
E+Q NL ++VL +K + I L DF++ P G L++
Sbjct: 426 PAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEF 485
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
G M+EFPLDP LSK I+AS + C DE++TIAAM++ + + P + A F
Sbjct: 486 GIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTF 545
Query: 602 HLGNVGDHIALLRVYNSWREC--NYSTQ-----WCYENYIQVRSMKRARDIRDQLEGLLE 654
L GDH L+ +YN++++ N + + WC+ ++ +++ A IR +L +++
Sbjct: 546 -LHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAELLEIIK 604
Query: 655 RVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSSGL 708
R+E+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q +HP S
Sbjct: 605 RIELPYAEPAFGSQENGLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSY 663
Query: 709 A--QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
A + +P WV++H+ ++ Y+R + + PE +++ P YY
Sbjct: 664 AITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY 705
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 670 (240.9 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 163/461 (35%), Positives = 251/461 (54%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILK 359
KI GR++PVEI ++ P D + TV +IH + PGDILVFL GQE IE +++
Sbjct: 341 KIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIE 400
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
L S + ++ P++ L E Q F P RKVVLATNIAETS+T+ G++YV
Sbjct: 401 EYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYV 460
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
ID G SK+K Y G+ESLLV ISK+SA+QRAGR+GR PGKC+RLYT + +K+M D
Sbjct: 461 IDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYT-EDVYKEMRD 519
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+PEI R N+ LI+ + G+DDL+ F +D P G +T
Sbjct: 520 ADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAIT 579
Query: 540 KVGRRMAEFPLDPMLSKMIVA--SDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNA 597
++G++MA P+ L ++++A S C E+I I + +S G+ IF++ + ++ +
Sbjct: 580 ELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVE 639
Query: 598 RMNFHL----GNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQL---- 649
L G++ ++ +++Y + E + T+WC + I +R+M++A +IR QL
Sbjct: 640 EYRRELRRREGDLMVYLTTMQMYTA--ENSDRTEWCKKRKINLRTMRQALNIRRQLRSLC 697
Query: 650 --EGLL-ERVEIE----VTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHI 702
EG+L E+ + V + + I K GF +A L + SY T + V I
Sbjct: 698 VSEGMLTEKPPPDPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAI 757
Query: 703 HPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEI 743
HPSS L +++ E V T K Y ++V ++ W+ E+
Sbjct: 758 HPSSSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 180 (68.4 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 39/99 (39%), Positives = 62/99 (62%)
Query: 207 VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
VGYS+RF+ + T +K++T+GMLL+E+L +P+L YS ++VDE HER + D+L G L
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 267 KDLI-------KFRSDLKLLISSATLDAEKFSDYFGSAP 298
K ++ + LK++ SAT + E ++F S P
Sbjct: 285 KQMLLSPDKPGRGGLPLKVVAMSATANIETLENFF-SIP 322
Score = 121 (47.7 bits), Expect = 3.0e-94, Sum P(3) = 3.0e-94
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQP 183
RK LPI+ ++ + + + + VL++VGETGSGK+TQ+PQ+L + + + +V T P
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTLP 170
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 223/699 (31%), Positives = 380/699 (54%)
Query: 77 NQSNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYP 134
N +++ Y E D D + ++ E+L EL+ D S L +ER+ LPI+
Sbjct: 10 NSASEKRYFPESLDSSDGDEEGILACEDL-ELNPF--DGLPYSSRYYKLLKEREDLPIWK 66
Query: 135 YRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPXXXXXXXX 191
+ ++ + + Q++++ G+ GK++Q+PQ+ E + + + G V CTQ
Sbjct: 67 EKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCTQVHKPTAVQL 126
Query: 192 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDE 251
EM V +GHEVGY I FE+C S +TIL+Y TD ML RE++S P L +Y V+++D+
Sbjct: 127 ALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSPFLGNYGVIILDD 186
Query: 252 AHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEI 311
HER+++TD+L GLLKD++ R +LKL+I+S+ K S Y+G+ P+ ++ +++PVE+
Sbjct: 187 IHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEV 245
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAE 371
Y + + +++ + + +IH + GDI+VFL +++IE A EI+ L + E
Sbjct: 246 VYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGE 305
Query: 372 LIICPIYANLPTELQAKIFEPTPEGA-------RKVVLATNIAETSLTIDGIKYVIDPGF 424
L++ P+Y P E + +F+P E R+VVL + E+ + + +++VID G
Sbjct: 306 LVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGV 361
Query: 425 SKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPE 484
+ K YNPR SL+ PIS++ A R G + GK F LY+ KDM E
Sbjct: 362 ERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEFASKDMRPLKPAE 421
Query: 485 IQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRR 544
+Q NL ++VL +K + I L + DF++ P G L++ G
Sbjct: 422 MQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGII 481
Query: 545 MAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLG 604
M+EFPLDP LSK I+AS + C +E++TIAAM++ N P + A F L
Sbjct: 482 MSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEEAALTCWKTF-LH 540
Query: 605 NVGDHIALLRVYNSWRECNYST-------QWCYENYIQVRSMKRARDIRDQLEGLLERVE 657
GDH L+ +Y ++++ ++ +WC++ ++ +++ A IR +L +++R+E
Sbjct: 541 PEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAELLEIVKRIE 600
Query: 658 IEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSSG--LA 709
+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q +HP S +
Sbjct: 601 LPCAEPAFGSKENALN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSIT 659
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+ +P WV++H+ ++ Y+R +E+ PE +++AP YY
Sbjct: 660 KKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY 698
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 223/698 (31%), Positives = 378/698 (54%)
Query: 79 SNDYEYVFE--DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYR 136
S++ Y E D D + ++ E+L EL+ D S L +ER+ LPI+ +
Sbjct: 12 SSEKRYFPESLDSSDGDEEGILACEDL-ELNPF--DGLPYSSRYYKLLKEREDLPIWKEK 68
Query: 137 DELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPXXXXXXXXXX 193
++ + + QV+++ G+ GK++Q+PQ+ E + + + G V CTQ
Sbjct: 69 YSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVVCTQVHKQTAVQLAL 128
Query: 194 XXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAH 253
EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P L SY V+++D+
Sbjct: 129 RVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGSYGVIILDDVQ 188
Query: 254 ERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
ER+++TD+L GLLKD++ R +LKL+I+S+ S Y+G+ P+ ++ +R PVE+ Y
Sbjct: 189 ERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPLIEVTSKR-PVEVVY 247
Query: 314 TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELI 373
+ + ++A + + +IH + GDI+VFL +++IE A EI+ L + EL+
Sbjct: 248 LSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVCQEGTNLNPDLGELV 307
Query: 374 ICPIYANLPTELQAKIFEPTPEGA-------RKVVLATNIAETSLTIDGIKYVIDPGFSK 426
+ P+Y P E + +F+P E R+VVL + E+ + + +++VID G +
Sbjct: 308 VVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVER 363
Query: 427 VKS-YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEI 485
K Y+PR +SL++ PIS++ A R G + GK F LY+ KDM E+
Sbjct: 364 RKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEEFASKDMRPLKPAEM 423
Query: 486 QRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
Q NL ++VL +K + I L + DF++ P G L++ G M
Sbjct: 424 QHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIM 483
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
+EFPLDP LSK I+AS + C DE++TIAAM++ N + P + A F L
Sbjct: 484 SEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAEAEALTCWKTF-LHP 542
Query: 606 VGDHIALLRVYNSWRECNYST-------QWCYENYIQVRSMKRARDIRDQLEGLLERVEI 658
GDH L+ +Y ++++ ++ +WC++ ++ +++ A IR +L +++R+E+
Sbjct: 543 EGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRAELLEIIKRIEL 602
Query: 659 EVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSS--GLAQ 710
S N L+ IKKA+ SG+F A+ + +G+Y + H Q +HP S + +
Sbjct: 603 PYAEPAFGSKENTLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSCYSVTK 661
Query: 711 VLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+P WV++H+ ++ Y+R +E+ PE +++ P YY
Sbjct: 662 KMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY 699
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 218/631 (34%), Positives = 342/631 (54%)
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXX 187
K LP+Y +D++L A+ + V+V+ TGSGKTTQ+P LHEAGY + G +G TQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 188 XXXXXXXXXQE-MGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSV 246
++ + V+ G VGY +RFED T +T +K MTDG+LL+E+ +P L YS+
Sbjct: 65 VLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSI 123
Query: 247 LMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
+MVDEAHER+L+ D + GLLK +++ R D +++ISSAT++ FS YF P+ KI
Sbjct: 124 IMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVA 183
Query: 307 YPVEIHY----------TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
YPV + + TK EA ++ + V ++ ++ G IL+FL G+ I+
Sbjct: 184 YPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCIT 243
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
L H +L + P+Y L E Q ++F P G RKVV+ATNIAETS+TID +
Sbjct: 244 RLSHERW-----FRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDV 298
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
VID G K+ SYNP + SL PIS+AS QR GR+GR G C+RLY+ ++ +
Sbjct: 299 TTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQ- 357
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
+ T+ EI RT+L+ VV+ + LGI D +FDFI PP
Sbjct: 358 REPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDR 417
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDK--DKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
L+++G+ M FPL P S+MIV + + D+++ AA LS + + + +D++
Sbjct: 418 SLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFS-EDQEEKT 476
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 654
A F +GD ++ LR+Y ++ + N +C Y+ R M +I++QLE ++
Sbjct: 477 KKAHGTFS-DPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIVS 535
Query: 655 RVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPR 714
+ + + ++ + +G + SY ++ + +HIHP S + + P+
Sbjct: 536 GMGFPLLTG-GTVEEYLICVGTGMIQFVCVQEHRDSYRSLT-AECIHIHPGSCVYKDRPK 593
Query: 715 WVVYHELVLTTKEYMRQVTELKPEWLVEIAP 745
++V E+V T++ Y V+ L + IAP
Sbjct: 594 FIVAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 901 (322.2 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 203/576 (35%), Positives = 315/576 (54%)
Query: 94 RDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
R + DG L LH ++ + S L L+ E+K+LPI+ YRD++++ V + V+V+ G
Sbjct: 127 RQEITDGR-LALLHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAG 185
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
+TG GK+TQ+PQYL +G + CTQP E + G +VGY IRF
Sbjct: 186 DTGCGKSTQVPQYLLASGINN---IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRF 242
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
E + T L ++T+G+LLR+I + +L Y VL+VDE HER L D L G+L+ L+ R
Sbjct: 243 ETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLR 302
Query: 274 SDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAA-------I 326
DL+L++ SAT++ + FS YF AP+ ++PGR +P+++ Y P + + +
Sbjct: 303 PDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPY 362
Query: 327 VTVLQ----IHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLP 382
+ VLQ + + GD+L+FL+G EI T E + + I+ P+++ L
Sbjct: 363 LRVLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQT----YATHTQRWIVLPLHSTLS 418
Query: 383 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVH 442
Q K+F+ P G RK +++TNIAETS+TIDG+++V+D G K S++P+ M+ L
Sbjct: 419 LAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEF 478
Query: 443 PISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGI 502
IS+AS+ QR GR+GRTGPG C+RLY+ +Y VPEI R L +++L +KS+G+
Sbjct: 479 WISRASSEQRKGRAGRTGPGVCYRLYSESDYDA-FAPYPVPEIHRVALDSLILQMKSMGL 537
Query: 503 DDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASD 562
D F FIDPPP GELT +GR +A+ P+D ++ KM+V
Sbjct: 538 GDPRTFTFIDPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGS 597
Query: 563 KDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWREC 622
+ ++T+AA LSV S F R AR + N GD L+ +N+W +
Sbjct: 598 VFNLVEPVLTVAAALSV-QSPFLRSAQHNPDCSTARQPLN-SNHGDPFTLMNTFNAWVQV 655
Query: 623 NY-----STQWCYENYIQVRSMKRARDIRDQLEGLL 653
S +WC ++ + + ++R Q + LL
Sbjct: 656 KADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELL 691
Score = 39 (18.8 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 681 HSAKLQKNGSYWTVKHPQRVHIHPSSGLA 709
H+A + + + ++ Q V IHP+S A
Sbjct: 827 HNATRKDSDQVFHTRNKQGVVIHPTSVFA 855
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 175/368 (47%), Positives = 244/368 (66%)
Query: 386 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPIS 445
QAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NPR GM++L ++PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 446 KASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDL 505
+A+A QR+GR+GRTGPG+CFRLYT Y ++ TVPEIQRTNLANVVL+LKSLG+ DL
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 506 VNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDK 565
+ F F+DPPP G LT GR M EFPLDP LSKM++ S
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMG 278
Query: 566 CSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYS 625
CS EI+ I +MLSV +IFYRPK ++ +D R F + DH+ L VY W+ NYS
Sbjct: 279 CSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKNNNYS 336
Query: 626 TQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKL 685
T WC +++I ++M++ R++R QL+ ++ + + + S D D ++K I + +F +AKL
Sbjct: 337 TIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKL 396
Query: 686 QKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEI 743
+ G Y ++ H+HP+S L + P ++VYHELV+TTKEYM+ VT + EWL E+
Sbjct: 397 KGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 456
Query: 744 APHYYQLK 751
P +Y +K
Sbjct: 457 GPMFYSVK 464
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 475 (172.3 bits), Expect = 3.3e-90, Sum P(4) = 3.3e-90
Identities = 102/246 (41%), Positives = 146/246 (59%)
Query: 347 GQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNI 406
G E E +E K G+ + + + P+Y+ LPT+ Q ++FEP P+G+R VVLATN+
Sbjct: 650 GSEGDENEEEEFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNV 709
Query: 407 AETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFR 466
AETSLTI GI+YV D G SK + Y+ TG++S V ISKASA QR GR+GRTGPG C+R
Sbjct: 710 AETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWR 769
Query: 467 LYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXX 526
LY+ Y +D+D+ +PE+ RT+L VVL LKS+ + +VNF F PP
Sbjct: 770 LYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLL 829
Query: 527 XXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR 586
G +T+VG M+ FPL P S++++ + C +T+ A LS IF
Sbjct: 830 KYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAE-IFI- 887
Query: 587 PKDKQV 592
P+++ +
Sbjct: 888 PENQAI 893
Score = 460 (167.0 bits), Expect = 3.3e-90, Sum P(4) = 3.3e-90
Identities = 102/264 (38%), Positives = 152/264 (57%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-----GK 177
+Q R LP+ +++A++ ++V+ G TGSGKTTQIPQ+L EAGY G
Sbjct: 350 IQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGM 409
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
+G TQP +E+G +VGY IRFE ++ T +K+MTDG+LLRE+
Sbjct: 410 IGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQ 468
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----------LKLLISSATLDA 287
+ L YS ++VDEAHER+++TDIL G+L +IK R++ LKL+I SATL
Sbjct: 469 DLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRI 528
Query: 288 EKFSD---YFGSAP-IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILV 343
E ++ F + P + ++ GR+YPV +H+ + DY++ A + + H PG +LV
Sbjct: 529 EDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLV 588
Query: 344 FLTGQEEIETADEILKHRTRGLGS 367
FLTGQ EI + LK + G+ S
Sbjct: 589 FLTGQNEITQLSKRLKLQFNGVTS 612
Score = 78 (32.5 bits), Expect = 3.3e-90, Sum P(4) = 3.3e-90
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 590 KQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQL 649
+Q +A N F L + D I +L+V + + +WC ++++ + +K A+ +R Q+
Sbjct: 921 RQFNAVNKNFCF-LDDKSDAIKMLQVLGEFAH-EPTEKWCESHFVRFKVLKEAQKLRQQI 978
Query: 650 EGLLERVEIEVTSNLNDLDAI 670
LL + I +N+N D +
Sbjct: 979 VQLL-KTNIPSFANINFQDKL 998
Score = 57 (25.1 bits), Expect = 5.3e-88, Sum P(4) = 5.3e-88
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 630 YENYIQVRSMKRARDIRDQLE-GLLERVEI---EVTSNLNDLDAIKKAITSGFFPHSAKL 685
+++ + + K+ + ++ + G ++RV I + + ++AI + P S +
Sbjct: 994 FQDKLDAPTEKQVKALKQMVAAGFIDRVAIRADKAPTPPTQFRPPRRAIDVPYIPLSPLV 1053
Query: 686 QKNGSYWTVKHPQRVHIHPSSGLAQV----LPRWVVYHEL 721
GS + + V+IHPSS LA + P +++Y+ L
Sbjct: 1054 VDGGS--SDDEEKLVYIHPSSPLAHLSTSECPDYIIYNYL 1091
Score = 46 (21.3 bits), Expect = 3.3e-90, Sum P(4) = 3.3e-90
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNE 145
++K ++ + L EER LP R+ELL E
Sbjct: 110 QTKRQALSQALNEERAGLPGNATREELLYEKRE 142
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 207/551 (37%), Positives = 297/551 (53%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI YRD +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 152 LARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 208
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE S T + ++T G+LLR + EP
Sbjct: 209 CTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREP 268
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YFG AP+
Sbjct: 269 TLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPV 328
Query: 300 FKIPGRRYPVEIHYTKA---PEADYIDAA----IVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y P A ++ + VL+ ++ P GD+LVFL+G
Sbjct: 329 VQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGL 388
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI E + R G ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 389 AEIGAVLEAAQAHARRSG----RWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAE 444
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 445 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 504
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP
Sbjct: 505 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRD 563
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM+V ++ ++TIAA LSV + +
Sbjct: 564 QGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSPFTRSTR 623
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNY-----STQWCYENYIQVRSMKRAR 643
A A + H GD L V+N+W + S +WC I+ +
Sbjct: 624 SNPKCAWRALESDH----GDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMA 679
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 680 NLRRQFKELLE 690
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 204/551 (37%), Positives = 298/551 (54%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 156 LAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 212
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE + T + ++T G+LLR+I EP
Sbjct: 213 CTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREP 272
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YFG+AP+
Sbjct: 273 SLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPV 332
Query: 300 FKIPGRRYPVEIHYTK------APEADYIDAA-IVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y A +++ +D + VL+ + P GD+LVFL+G
Sbjct: 333 VQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGM 392
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI + E + S+ ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 393 AEISSVLEA----AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAE 448
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K Y+P+ + L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 449 TSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 508
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP
Sbjct: 509 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQD 567
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM++ ++ ++TIAA LSV S F R
Sbjct: 568 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSA 626
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSW-----RECNYSTQWCYENYIQVRSMKRAR 643
AR + GD L V+N+W S +WC I+ +
Sbjct: 627 QSNPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMA 685
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 686 NLRRQFKELLE 696
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 204/551 (37%), Positives = 298/551 (54%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 151 LAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 207
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE + T + ++T G+LLR+I EP
Sbjct: 208 CTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREP 267
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YFG+AP+
Sbjct: 268 SLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPV 327
Query: 300 FKIPGRRYPVEIHYTK------APEADYIDAA-IVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y A +++ +D + VL+ + P GD+LVFL+G
Sbjct: 328 VQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGM 387
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI + E + S+ ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 388 AEISSVLEA----AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAE 443
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K Y+P+ + L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 444 TSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 503
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP
Sbjct: 504 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQD 562
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM++ ++ ++TIAA LSV S F R
Sbjct: 563 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSA 621
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSW-----RECNYSTQWCYENYIQVRSMKRAR 643
AR + GD L V+N+W S +WC I+ +
Sbjct: 622 QSNPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMA 680
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 681 NLRRQFKELLE 691
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 204/551 (37%), Positives = 299/551 (54%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 154 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 210
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE S T + ++T G+LLR+I EP
Sbjct: 211 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREP 270
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YF AP+
Sbjct: 271 SLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPV 330
Query: 300 FKIPGRRYPVEIHYTK------APEADYIDAA-IVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y A +++ +D + VL+ + P GD+LVFL+G
Sbjct: 331 VQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGM 390
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI T +L + S ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 391 AEITT---VLD-AAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAE 446
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG C+RLY
Sbjct: 447 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLY 506
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP
Sbjct: 507 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQE 565
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM++ ++ ++TIAA LSV S F R
Sbjct: 566 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSA 624
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSW-----RECNYSTQWCYENYIQVRSMKRAR 643
+ AR + GD L V+N+W S +WC ++ +
Sbjct: 625 QSNLDCATARRPLE-SDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMA 683
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 684 NLRRQFKELLE 694
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 525 (189.9 bits), Expect = 1.6e-87, Sum P(2) = 1.6e-87
Identities = 142/437 (32%), Positives = 226/437 (51%)
Query: 318 EADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPI 377
+ D ++A I + ++ + G ILVFLTG +EI E + + LG ++ ++ P+
Sbjct: 486 DVDLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKI-NMNNFLGDS-SKFLVLPL 540
Query: 378 YANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGME 437
+ ++PT Q +IF+ P RK+VLATNIAE+S+TID + YV+D G +K SY+ +
Sbjct: 541 HGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVA 600
Query: 438 SLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLIL 497
LL ISKASA QR GR+GR G C+RLY Y +PEI RT L + L +
Sbjct: 601 CLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDA-FPQYQLPEIIRTPLQELCLHI 659
Query: 498 KSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLS 555
KSL + + +F + PP ELT +GR + P+DP +
Sbjct: 660 KSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIG 719
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRV 615
KM++ +C + +TIAA L+ S F P +++ AD A+ F + DHIALL+
Sbjct: 720 KMLLIGAIFQCVNPALTIAAALAY-RSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKA 778
Query: 616 YNSWRECNYS---TQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLN------- 665
Y +R+ +C++N++ +++ D+R+Q LL + S N
Sbjct: 779 YEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSY 838
Query: 666 DLDAIKKAITSGFFPHSAKLQKNG---SYWTVKHPQRVHIHPSSGLAQV----LPRWVVY 718
D++ I + +G +P+ + ++ G +++T K +V IHP S A+V LP ++VY
Sbjct: 839 DMEMISAVLCAGLYPNVVQCKRRGKRTAFYT-KELGKVDIHPGSVNARVNLFSLP-YLVY 896
Query: 719 HELVLTTKEYMRQVTEL 735
E V TT Y+R T +
Sbjct: 897 SEKVKTTSVYIRDSTNI 913
Score = 405 (147.6 bits), Expect = 1.6e-87, Sum P(2) = 1.6e-87
Identities = 87/226 (38%), Positives = 133/226 (58%)
Query: 88 DKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQ 147
D + DS ++ E E +K K +++ L+ R+ LP + ++E L +V++ Q
Sbjct: 187 DSASKLPDS-LEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQ 245
Query: 148 VLVIVGETGSGKTTQIPQYLHEAGYTK-QG---KVGCTQPXXXXXXXXXXXXXQEMGVKL 203
VLV+ GETG GKTTQ+PQ++ E + +G + CTQP E G +
Sbjct: 246 VLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESI 305
Query: 204 GHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILF 263
G VGY IR E S++T L + T G+LLR ++ +PNL + S L+VDE HER ++ D L
Sbjct: 306 GESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLL 365
Query: 264 GLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 309
+L+DL+ R DL+L++ SAT++A+ FS YFG++P IPG +PV
Sbjct: 366 IILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPV 411
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 204/551 (37%), Positives = 297/551 (53%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 208
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE S T + ++T G+LLR+I EP
Sbjct: 209 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREP 268
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YF +AP+
Sbjct: 269 SLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPV 328
Query: 300 FKIPGRRYPVEIHYTKA---P---EADYIDAA-IVTVLQI----HVTQSPGDILVFLTGQ 348
++PGR +P+ + Y P +++ +D + VL+ + + GD+LVFL+G
Sbjct: 329 VQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGM 388
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI E + S ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 389 AEISAVLEA----AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAE 444
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 445 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 504
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L ++VL +KS+ + D F FI+PPP
Sbjct: 505 AESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRD 563
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM++ + ++TIAA LSV S F R
Sbjct: 564 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSA 622
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSW-----RECNYSTQWCYENYIQVRSMKRAR 643
AR + GD L V+N+W S +WC I+ +
Sbjct: 623 QSSPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMA 681
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 682 NLRRQFKELLE 692
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 204/551 (37%), Positives = 297/551 (53%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG + V
Sbjct: 152 LAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH---VA 208
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE S T + ++T G+LLR++ EP
Sbjct: 209 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREP 268
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YFG+AP+
Sbjct: 269 SLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPV 328
Query: 300 FKIPGRRYPVEIHYTKA---P---EADYIDAA-IVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y P +++ +D + VL+ + P GD+LVFL+G
Sbjct: 329 VQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGM 388
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI E + S ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 389 AEISAVLE----PAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAE 444
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 445 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 504
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP
Sbjct: 505 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRD 563
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
LT +G +A+ P+D ++ KM++ ++ ++TIAA LSV + F R
Sbjct: 564 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QTPFTRSA 622
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNY-----STQWCYENYIQVRSMKRAR 643
R + GD LL V+N+W + S +WC I+ +
Sbjct: 623 QSNPECAATRRPLE-SDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMA 681
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 682 NLRRQFKELLE 692
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 392 (143.0 bits), Expect = 6.7e-86, Sum P(5) = 6.7e-86
Identities = 80/189 (42%), Positives = 117/189 (61%)
Query: 371 ELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSY 430
+L + P+YA L Q ++FE + R VV+ATN+AETSLTI GIKYV+D G KVK+Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 431 NPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNL 490
+ +TGMES V IS+ASA QRAGR+GRTGPG C+RLY+ + +++++PEI + +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 491 ANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPL 550
V+L++KS+ I + NF F PP G LT +G+ M+ +P+
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 551 DPMLSKMIV 559
P S+M++
Sbjct: 826 SPRHSRMLL 834
Score = 366 (133.9 bits), Expect = 6.7e-86, Sum P(5) = 6.7e-86
Identities = 81/205 (39%), Positives = 124/205 (60%)
Query: 95 DSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGE 154
D +I+ E++ +P S ++E RK LPI E+++A+N + ++I G+
Sbjct: 206 DGLIENEDVTVQGPRVPAFVVHVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQ 265
Query: 155 TGSGKTTQIPQYLHEAGY-TKQ-----GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVG 208
TG GKTTQ+PQ+L+EAG+ +KQ G +G TQP E+GV+LG EVG
Sbjct: 266 TGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVG 325
Query: 209 YSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKD 268
+ +R++ E + +K+MTDG+LLREI ++ L YSV+++DEAHER+L+TDIL G+L
Sbjct: 326 FQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTR 385
Query: 269 LIKFRSDL-----KLLISSATLDAE 288
+IK R + K L S T+ +E
Sbjct: 386 VIKIRQEYYEEQQKSLQSGGTVTSE 410
Score = 157 (60.3 bits), Expect = 6.7e-86, Sum P(5) = 6.7e-86
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 276 LKLLISSATLDAEKFSD---YFGSAP-IFKIPGRRYPVEIHYTKAPE-ADYIDAAIVTVL 330
LKL++ SATL E F F + P + ++P R+YPV IH++K E DYI A V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 331 QIHVTQSPGDILVFLTGQEEIETADEILKHRTRGL 365
IH G ILVF+TGQ E++ E L+ ++ L
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Score = 116 (45.9 bits), Expect = 6.7e-86, Sum P(5) = 6.7e-86
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 665 NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT 724
N+ + + +AI +G+ A+ + Y + V +H S L P +VY EL+LT
Sbjct: 1003 NEEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLT 1062
Query: 725 TKEYMRQVTELKPEWLVEIA 744
+ YM T ++PEWLV+ A
Sbjct: 1063 NRPYMHGATRVRPEWLVKHA 1082
Score = 46 (21.3 bits), Expect = 6.7e-86, Sum P(5) = 6.7e-86
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 586 RPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDI 645
R KD++ AR F + D + + +S+ +C N + +++M +
Sbjct: 895 RKKDRKEKIKAARDRFSNPS-SDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKL 953
Query: 646 RDQL 649
+DQL
Sbjct: 954 KDQL 957
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 862 (308.5 bits), Expect = 6.1e-85, P = 6.1e-85
Identities = 206/550 (37%), Positives = 307/550 (55%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LPIY YR ++L+ ++ Q++V++GETGSGK+TQ+ Q+L ++G + CTQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 190 XXXXXXXQEM-GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLM 248
+E G + V + F + + YMTD LL+ + + +L S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 249 VDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
+DEAHER+L+TD+L LLK L+ R DL+L+I SAT DA++ S YF S I + GR +P
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 309 VEIHYTKAPE---------ADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
VEI Y+ + A Y+ + ++IH T+ G IL FLT Q E+E A E +
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE--R 543
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
T S IA P++ L E Q ++F+ P G RKV+ ATNIAETSLTI G+KYV
Sbjct: 544 FITP---SAIA----LPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYV 595
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
ID G K Y PRTGM L V +S++SA QRAGR+GRT PG+C+RLY+ +++ M+
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDS-MNL 654
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXG-- 536
N PEI+R +L +L + +LG++++ F+F+D P P G
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK--DKQVHA 594
ELT+ G + + L+P L K+I+ + + E I +AA+++ +SIF R D ++ A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC--NYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
D ++ F N GD LL VY W +WC+EN + +SM+R D +LE
Sbjct: 775 DRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEIC 833
Query: 653 LERVEIEVTS 662
+ER E+ + S
Sbjct: 834 IER-ELTLVS 842
Score = 198 (74.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 68/227 (29%), Positives = 105/227 (46%)
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK--DKQVHA 594
ELT+ G + + L+P L K+I+ + + E I +AA+++ +SIF R D ++ A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC--NYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
D ++ F N GD LL VY W +WC+EN + +SM+R D +LE
Sbjct: 775 DRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEIC 833
Query: 653 LERVEIEVTS------NLND---LDA-IKKAITSGFFPHSAKLQKNGS--YWTVKHPQRV 700
+ER E+ + S N N+ D +K I + + A Y Q+V
Sbjct: 834 IER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQV 892
Query: 701 HIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAP 745
+HPS L P WVV+ EL+ +Y+ VT E L + P
Sbjct: 893 QLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDP 939
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 467 (169.5 bits), Expect = 9.0e-85, Sum P(3) = 9.0e-85
Identities = 115/307 (37%), Positives = 170/307 (55%)
Query: 76 KNQSNDYEYVFED-KIDF---IRDSVIDGENLDELHSELPDKSKEK------SALEMLQE 125
K + D E V ID+ IR +D + L E + + + S K S + +Q+
Sbjct: 328 KLEGRDQELVTPTLNIDYKPIIRKEDLD-DGLQEAYVPINENSTRKAFYVEVSRSDEIQK 386
Query: 126 ERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ------GKVG 179
R LP++ ++++A++ V++I GETGSGKTTQ+PQ+L+EAG+ + G VG
Sbjct: 387 ARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVG 446
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
TQP E+G GH+VGY IRF+ E T +K+MTDG+LLRE++ +
Sbjct: 447 ITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDF 505
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL-----------KLLISSATLDAE 288
L YS +++DEAHER ++TDIL G+L ++ R+ L KL+I SATL
Sbjct: 506 KLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVS 565
Query: 289 KFSD---YFGSAP-IFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVF 344
FS+ F AP + ++ R++PV IH+ + +Y D A +IH PG ILVF
Sbjct: 566 DFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVF 625
Query: 345 LTGQEEI 351
LTGQ+EI
Sbjct: 626 LTGQQEI 632
Score = 445 (161.7 bits), Expect = 9.0e-85, Sum P(3) = 9.0e-85
Identities = 93/233 (39%), Positives = 141/233 (60%)
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EE E +E+L T G + L + P+Y+ LPT+ Q ++F+ P+G+R ++ATN+AE
Sbjct: 710 EEEEGFEEVL---TEGQTAN-DPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAE 765
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TSLTI G++YV+D G SK + YN G++S V +SKASA QR+GR+GRTGPG C+RLY
Sbjct: 766 TSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLY 825
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+ + D + + PEI R + ++VL +KS+ I +++NF F PP
Sbjct: 826 SSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQY 885
Query: 529 XXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN 581
+T+ G++M+ FPL P SKM++ SD+ C I+ I + LSVG+
Sbjct: 886 LGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGD 938
Score = 60 (26.2 bits), Expect = 9.0e-85, Sum P(3) = 9.0e-85
Identities = 48/205 (23%), Positives = 91/205 (44%)
Query: 561 SDKDKCSDEIITIAAMLSVGNSIFYRPKD-KQVHADNARMNFHLGNVGDHIALLRVYNSW 619
S DK SD + +LSV +++ Y PK+ K++ + NF G + + I LR
Sbjct: 995 SKLDKFSD----VFRLLSVVSAMDYVPKEQKEIFM---KKNFLRGKLMEEIVKLR----- 1042
Query: 620 RECNY--STQWCYENY-IQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITS 676
++ Y + EN + +R+ DI ++ ++ ++ + + D A++ +
Sbjct: 1043 KQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQ--IKLLKQMICAGFVDHVAVRADV-- 1098
Query: 677 GFFPHSAKLQKNGSYWTVKH-P---QR--------VHIHPSS---GLAQVLPRWVVYHEL 721
FP AK+ S + + P R V+IHP+S L ++ P++++Y+ L
Sbjct: 1099 -LFPDDAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEMPPKYMLYYSL 1157
Query: 722 VL--TTKEYMRQVTELKPEWLVEIA 744
L K M + ++ L IA
Sbjct: 1158 HLGGNNKTRMNTLCDIASTPLANIA 1182
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 472 (171.2 bits), Expect = 1.6e-84, Sum P(3) = 1.6e-84
Identities = 102/242 (42%), Positives = 147/242 (60%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-GKVGCT 181
+QE R LPI +++A+NE ++VI GETGSGKTTQ+PQ+L+EAGYT G +G T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
+P +EM L H V Y IR+E T+++T +K+MTDG+LL+E+ +
Sbjct: 295 EPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFL 352
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD---- 292
L Y V+++DEAHER++ TDIL GLL ++ R LKL+I SATL E F++
Sbjct: 353 LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRL 412
Query: 293 YFGSAPIFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
+ G+ P+ ++ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 413 FAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEV 472
Query: 352 ET 353
+
Sbjct: 473 HS 474
Score = 362 (132.5 bits), Expect = 1.6e-84, Sum P(3) = 1.6e-84
Identities = 87/223 (39%), Positives = 123/223 (55%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QAK+F P P G R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V IS+ASA QRAGR+GRT PG C+RLY+ + D + + PEI + +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVF-MDFEKFSAPEITKRPVE 695
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXX---XGELTK-------- 540
+++L +K+L I+ ++NF F PPP G L +
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 541 ----VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+GR MA FP+ P +KM+ S + C ITI + ++V
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTV 798
Score = 132 (51.5 bits), Expect = 1.6e-84, Sum P(3) = 1.6e-84
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 687 KNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
KN +Y T V IHPSS L + LP +VVY E+V TTK YM+ V+ ++PEW+ + P
Sbjct: 941 KN-AYKTALLDDPVFIHPSSVLFKQLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPP 999
Query: 747 Y 747
Y
Sbjct: 1000 Y 1000
Score = 83 (34.3 bits), Expect = 2.7e-55, Sum P(3) = 2.7e-55
Identities = 31/128 (24%), Positives = 56/128 (43%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRPKDKQ---- 591
++ +GR MA FP+ P +KM+ S + C ITI + ++V F RP +
Sbjct: 757 ISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEEFDRPAASEEETV 816
Query: 592 -VHADNARM---------NFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
+ R+ L +GD + +L + + ++C EN ++ ++M
Sbjct: 817 KLKGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLE 876
Query: 642 ARDIRDQL 649
R +R QL
Sbjct: 877 IRRLRGQL 884
Score = 57 (25.1 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 234 EILSEPNLESYSVLMVDEAHE-RTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
+ L NL++Y+V+ VDE E R TD D+ SD+ L + + E+ SD
Sbjct: 521 QTLPRINLDNYAVVPVDEGDEDRDAETD------DDIAG--SDVDLDLGDGDSEEEEKSD 572
Query: 293 YFGSAPIFKIP 303
S P++ +P
Sbjct: 573 --SSLPLYVLP 581
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 401 (146.2 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 90/232 (38%), Positives = 138/232 (59%)
Query: 355 DEILKH--RTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
+EI H +T + KI + I +Y++LP + Q IFEP P RKV+L+TNIAETS+T
Sbjct: 381 NEICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVT 440
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
I IKYVID G K+K ++ G L V ISK SA+QR+GR+GR PG+ +R+YT
Sbjct: 441 IPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEE 500
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++M+ +PEI R++L + L LK++ I++ + F+F + P
Sbjct: 501 Y-ENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAI 559
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF 584
LT +G+++ FPL+P+ + +++ S + C DEI TI A+L+ +SIF
Sbjct: 560 DMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIF 610
Score = 306 (112.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 55/131 (41%), Positives = 92/131 (70%)
Query: 203 LGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDIL 262
+G+ VGY+IRF++ S+KT +K++TDG+L+REI+++P L+ Y L++DE HER++ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 263 FGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYI 322
G K L++ R +K+++ SAT D F+ +F + PI IP + + + I+Y + DYI
Sbjct: 158 LGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYI 217
Query: 323 DAAIVTVLQIH 333
+ + T+LQIH
Sbjct: 218 LSVVSTILQIH 228
Score = 147 (56.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 39/152 (25%), Positives = 80/152 (52%)
Query: 607 GDHIALLRVYNSWRECNYSTQWCYENYIQVRS--MKRARDIRDQL-EGLLERVEIEVTSN 663
GDH+ LL ++ W+E + + + N + + +++ I+ QL E + +++IE+
Sbjct: 713 GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMKNKMKIEIPKK 772
Query: 664 LN--DLDAIKKAITSGFFPHSAKLQKNGS-YWTVKHPQRVHIHPSSGL--AQVLPRWVVY 718
L+ D I + F + AK N + Y + + ++ IHPSS L + + P ++ Y
Sbjct: 773 LHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLFNSYIKPTFIFY 832
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
++V T + Y R VT+++ +WL++ +Q+
Sbjct: 833 SDIVQTKRLYARIVTKIEADWLLKYVSAKFQV 864
Score = 113 (44.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
+ LPI Y+ E+ + + + +++I GETG GKTTQ+PQ ++E + K+ K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 75 (31.5 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 336 QSPGDILVFLTGQEEIETADEILKHRTR 363
+S GDILVFL GQEEIE + +LK + +
Sbjct: 314 KSLGDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 579 VGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYN 617
+GN + Y + K V +D R+ F V D I + + N
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKF----VTDGILIREIMN 132
Score = 38 (18.4 bits), Expect = 9.7e-73, Sum P(5) = 9.7e-73
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 698 QRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDV 753
+R IHP +L + ++ E + K++ + L E L ++ QL ++
Sbjct: 705 RRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEI 760
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 401 (146.2 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 90/232 (38%), Positives = 138/232 (59%)
Query: 355 DEILKH--RTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
+EI H +T + KI + I +Y++LP + Q IFEP P RKV+L+TNIAETS+T
Sbjct: 381 NEICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVT 440
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
I IKYVID G K+K ++ G L V ISK SA+QR+GR+GR PG+ +R+YT
Sbjct: 441 IPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEE 500
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
Y ++M+ +PEI R++L + L LK++ I++ + F+F + P
Sbjct: 501 Y-ENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAI 559
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF 584
LT +G+++ FPL+P+ + +++ S + C DEI TI A+L+ +SIF
Sbjct: 560 DMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIF 610
Score = 306 (112.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 55/131 (41%), Positives = 92/131 (70%)
Query: 203 LGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDIL 262
+G+ VGY+IRF++ S+KT +K++TDG+L+REI+++P L+ Y L++DE HER++ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 263 FGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYI 322
G K L++ R +K+++ SAT D F+ +F + PI IP + + + I+Y + DYI
Sbjct: 158 LGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYI 217
Query: 323 DAAIVTVLQIH 333
+ + T+LQIH
Sbjct: 218 LSVVSTILQIH 228
Score = 147 (56.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 39/152 (25%), Positives = 80/152 (52%)
Query: 607 GDHIALLRVYNSWRECNYSTQWCYENYIQVRS--MKRARDIRDQL-EGLLERVEIEVTSN 663
GDH+ LL ++ W+E + + + N + + +++ I+ QL E + +++IE+
Sbjct: 713 GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMKNKMKIEIPKK 772
Query: 664 LN--DLDAIKKAITSGFFPHSAKLQKNGS-YWTVKHPQRVHIHPSSGL--AQVLPRWVVY 718
L+ D I + F + AK N + Y + + ++ IHPSS L + + P ++ Y
Sbjct: 773 LHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLFNSYIKPTFIFY 832
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
++V T + Y R VT+++ +WL++ +Q+
Sbjct: 833 SDIVQTKRLYARIVTKIEADWLLKYVSAKFQV 864
Score = 113 (44.8 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
+ LPI Y+ E+ + + + +++I GETG GKTTQ+PQ ++E + K+ K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 75 (31.5 bits), Expect = 4.6e-84, Sum P(5) = 4.6e-84
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 336 QSPGDILVFLTGQEEIETADEILKHRTR 363
+S GDILVFL GQEEIE + +LK + +
Sbjct: 314 KSLGDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 579 VGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYN 617
+GN + Y + K V +D R+ F V D I + + N
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKF----VTDGILIREIMN 132
Score = 38 (18.4 bits), Expect = 9.7e-73, Sum P(5) = 9.7e-73
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 698 QRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDV 753
+R IHP +L + ++ E + K++ + L E L ++ QL ++
Sbjct: 705 RRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEI 760
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 192/514 (37%), Positives = 296/514 (57%)
Query: 265 LLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYT-----KAPEA 319
LLK ++ LK+++ SATL+ EK S ++G+ P+F IPGR YPV+ + K E+
Sbjct: 158 LLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 320 D-YIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA-D------EILKHRTRGLGSKIAE 371
Y+ + L +H ++ GDILVFLTGQ EIE A D EIL +R +
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L+I +Y ++PT+ Q +IF+P P+G RK V+ATNIA TSLTIDGI+Y++D GF K ++N
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
R G++ L V PISK+ A QRAGR+GRT GKCFR+Y+ + M + T+PEIQRT+L
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 551
+V+L LK LG+ D++ F ++D P GE+TK+GR M EFPL
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLP 457
Query: 552 PMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP----KDKQVHADNARMNFHLGNVG 607
P L++ ++ + C D ++ +AAMLSV N IF RP K K+ + + G
Sbjct: 458 PNLTRALLKAAALGCEDIMLPVAAMLSVEN-IFIRPGKPEKQKEAEVRHKEIAACSGGSN 516
Query: 608 DHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDL 667
D + LL V+ R + WC EN+I R++K A + QL +L R++ +
Sbjct: 517 DFLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQKDFPHERF 576
Query: 668 DA-----IKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGL-AQVLPR-WVVYH 719
+ +++ + G+F + A+ S+ T+ H V IHPSS L Q L W+++H
Sbjct: 577 EGSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFH 636
Query: 720 ELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDV 753
++++T++ Y+R V ++ +W+ ++ P +++ DV
Sbjct: 637 DVLVTSRVYVRTVCPIRYDWVKDLLPKLHEI-DV 669
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 123/256 (48%), Positives = 176/256 (68%)
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
S +K + E E K LPIY Y+D+L+QAV E L++ GETGSGKTTQ+PQYL++AG +
Sbjct: 2 STKKRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS 61
Query: 174 KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
+ G++G TQP EM V+LG EVGY +RF+DC+++ T++KYMTDG LLR
Sbjct: 62 RNGRIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLR 121
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKD-LIKF----RSDLKLLISSATLDAE 288
EIL++P+L YS++++DEAHER+L+TD+L GLLK L+K ++ LK+++ SATL+ E
Sbjct: 122 EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETE 181
Query: 289 KFSDYFGSAPIFKIPGRRYPVEIHYT-----KAPEAD-YIDAAIVTVLQIHVTQSPGDIL 342
K S ++G+ P+F IPGR YPV+ + K E+ Y+ + L +H ++ GDIL
Sbjct: 182 KLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDIL 241
Query: 343 VFLTGQEEIETADEIL 358
VFLTGQ EIE A ++L
Sbjct: 242 VFLTGQSEIEKACDLL 257
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 505 (182.8 bits), Expect = 9.9e-84, Sum P(3) = 9.9e-84
Identities = 149/483 (30%), Positives = 242/483 (50%)
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ 336
K LISSA DA + +D+ G F+ R + +P D I ++ + H+ +
Sbjct: 525 KSLISSAVEDALEAADFKGYN--FRT---RDSLSCW---SP--DSIGFNLIENVLCHIVK 574
Query: 337 S--PGDILVFLTGQEEIETADEILK-HRTRGLGSKIAELIICPIYANLPTELQAKIFEPT 393
PG +LVF+TG ++I + L+ H G +K+ L+ C + ++ + Q IF+
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL-LLAC--HGSMASSEQRLIFDRP 631
Query: 394 PEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRA 453
PEG RK+VLATN+AETS+TI+ + YVID G +K SY+ LL ISKA+A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 454 GRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF--DFI 511
GR+GR PG+C+ LY Y D PE+ RT L ++ L +KSLG+ + F +
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEA-FADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRAL 750
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
PP LT +G+ ++ P++P L KM++ C D ++
Sbjct: 751 QPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVM 810
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQ---W 628
T+ A LSV + F P DK+ A+ AR F + DH+ L+R YN W++ + +
Sbjct: 811 TVVAGLSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDY 869
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVE----IEVTSNLN-DLDAIKKAITSGFFPHSA 683
C++N++ +++K +R Q LL+ IE S L+ D ++ I +G FP
Sbjct: 870 CWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVC 929
Query: 684 KLQKNGSYWTVKHPQ--RVHIHPSS--GLAQVLP-RWVVYHELVLTTKEYMRQVTELKPE 738
+ T+K + +V ++ SS G ++P W+V+++ V ++R T +
Sbjct: 930 SVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDS 989
Query: 739 WLV 741
L+
Sbjct: 990 VLL 992
Score = 403 (146.9 bits), Expect = 9.9e-84, Sum P(3) = 9.9e-84
Identities = 87/203 (42%), Positives = 121/203 (59%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY-TKQG---KVGCTQ 182
RKTLP Y +D LL+A+ QV+V+ GETG GKTTQ+PQY+ E+ +G + CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P E G ++G VGY +R E T L + T G+LLR +L + +L+
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
+ ++VDE HER ++ D L +LKDL+ R DLKL++ SATL+AE FS YFG AP I
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 303 PGRRYPVEIHYTKAPEADYIDAA 325
PG YPV H+ + DY++ +
Sbjct: 476 PGFTYPVRAHFLE----DYLETS 494
Score = 41 (19.5 bits), Expect = 9.9e-84, Sum P(3) = 9.9e-84
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 59 WEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKS 118
++ G + Y + +D + V + + S +D N+D+ +L + K
Sbjct: 93 FQRQNSGYGRIAYNDYESSDESDRD-VGSSQSQQMAGSTLD--NIDQWRFKLTMLLRNKE 149
Query: 119 ALEMLQEERK 128
E++ ERK
Sbjct: 150 DQEVVSRERK 159
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 447 (162.4 bits), Expect = 4.6e-83, Sum P(3) = 4.6e-83
Identities = 122/365 (33%), Positives = 186/365 (50%)
Query: 26 GHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQM-----GKASLKYGSKNKNQSN 80
GH E L+ DS+ D + ++W Q+ G+ S NK +
Sbjct: 287 GHPEFENE-DFDLETSEDDSSDDATERASRFKSWANKQILGADVGEKSHDVAPDNKIDNP 345
Query: 81 DYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEM-----LQEERKTLPIYPY 135
D + V ++ R + E+++ ++ K ++ + + +QE R LPI
Sbjct: 346 DADMVRAQRMP--RKLKMREEDVEPTADDIEIKGRKTTYTIINRPPEIQESRLALPIVAE 403
Query: 136 RDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-----GKVGCTQPXXXXXXX 190
+++ + V++I G TGSGKTTQ+PQ+L EAG++ G + TQP
Sbjct: 404 EQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPRRVAAVS 463
Query: 191 XXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVD 250
+E+ +V Y IRF+ + T +K+MTDG+LLRE+ S+ L +YS ++VD
Sbjct: 464 IAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAYSAVIVD 522
Query: 251 EAHERTLSTDILFGLLKDLIKFR-----SD-----LKLLISSATLDAEKFSD---YFG-S 296
EAHER+++TDIL GLL +++ R SD LKL+I SATL FS+ F
Sbjct: 523 EAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSENKLLFSVP 582
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
PI KI R+YPV IH+ + + DY+ A V IH G ILVFLTGQ+E+E +
Sbjct: 583 PPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLCQ 642
Query: 357 ILKHR 361
+L+ R
Sbjct: 643 MLRKR 647
Score = 423 (154.0 bits), Expect = 4.6e-83, Sum P(3) = 4.6e-83
Identities = 91/255 (35%), Positives = 143/255 (56%)
Query: 348 QEEIETADEILKHRTRGL--GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATN 405
Q E E D++ + + + + + P+Y+ L TE Q K+F+ +PEG R ++ATN
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATN 735
Query: 406 IAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCF 465
+AETS+TI I+YV+D G +K + YN +T ++ V ISKA+A QRAGR+GRTGPG C+
Sbjct: 736 VAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCY 795
Query: 466 RLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXX 525
RLY+ + +++PEI RT + ++VL +K++ ID++ NF F P
Sbjct: 796 RLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKL 855
Query: 526 XXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFY 585
G LTK+G +M+ FPL P SKM++ + C +I + + LS+ N +F
Sbjct: 856 LSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSI-NQLFV 914
Query: 586 RPKDK--QVHADNAR 598
+ H N+R
Sbjct: 915 SKQSLLYDAHDKNSR 929
Score = 88 (36.0 bits), Expect = 4.6e-83, Sum P(3) = 4.6e-83
Identities = 40/153 (26%), Positives = 73/153 (47%)
Query: 610 IALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLD- 668
++LL ++ + ++C ENY++ ++++ ++R Q+ GLL+R + V L
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQL 1030
Query: 669 ----AIK-KAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS-SGLAQVLP--------R 714
+++ KA+ F SA + + Y K V + PS S + Q +P
Sbjct: 1031 KPPTSVQIKALRQ--FIASAYIDQVALYDKEKRGY-VTLFPSGSEVVQFVPDRTYNIDSE 1087
Query: 715 WVVY---HELVLTTKEYMRQVTELKPEWLVEIA 744
+VVY HE + + YM +TE+ PE L +A
Sbjct: 1088 YVVYLSLHES-RSGRVYMSPLTEISPEHLARLA 1119
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 841 (301.1 bits), Expect = 1.1e-82, P = 1.1e-82
Identities = 203/550 (36%), Positives = 300/550 (54%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LPIY YR ++L+ ++ Q++V++GETGSGK+TQ+ Q+L ++G + CTQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 190 XXXXXXXQEM-GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLM 248
+E G + V + F + + YMTD LL+ + + +L S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 249 VDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
+DEAHER+L+TD+L LL+ L+ R DL+L+I SAT DA + S Y I + GR +P
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 309 VEIHYTKAPE---------ADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
VEI Y+ + A Y + ++IH T+ G IL FLT Q E+E A E
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE--- 539
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
R + L P++ L E Q +F+ P G RKV+ ATNIAETSLTI G+KYV
Sbjct: 540 ---RFVAPSAIAL---PLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYV 592
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
ID G K Y PRTGM L V +S++SA QRAGR+GRT PG+C+RLY+ ++ M+
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDS-MNL 651
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXG-- 536
N PEI+R +L +L + +LGID++ F+F+D P P G
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK--DKQVHA 594
ELT+ G + + L+P L K+I+ + + E I +AA+++ +SIF R D ++ A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC--NYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
D ++ F N GD LL VY W + +WC+EN + +SM+R D +LE
Sbjct: 772 DRLKVQFCNDN-GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEIC 830
Query: 653 LERVEIEVTS 662
+ER E+ + S
Sbjct: 831 IER-ELTLVS 839
Score = 201 (75.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 66/227 (29%), Positives = 104/227 (45%)
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK--DKQVHA 594
ELT+ G + + L+P L K+I+ + + E I +AA+++ +SIF R D ++ A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC--NYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
D ++ F N GD LL VY W + +WC+EN + +SM+R D +LE
Sbjct: 772 DRLKVQFCNDN-GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEIC 830
Query: 653 LERVEIEVTS------NLND---LDAIKKAITSGFFPHSAKLQKNGS---YWTVKHPQRV 700
+ER E+ + S N N+ D K + + + Y Q+V
Sbjct: 831 IER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQV 889
Query: 701 HIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAP 745
+HPS L P WVV+ EL+ +Y+ VT E L + P
Sbjct: 890 QLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 459 (166.6 bits), Expect = 3.4e-82, Sum P(3) = 3.4e-82
Identities = 119/364 (32%), Positives = 187/364 (51%)
Query: 20 DAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEA--WEEHQMGKASLKYGSKNKN 77
D D+E +E + S R++ +A K +AEQ+ E + + + K
Sbjct: 336 DDDDDEEEEEEESKLMKSKPRHSTTAASFK--EWAEQQVRIMEGRDKNVLTPEVSEEIKK 393
Query: 78 QSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKS--KEKSALEMLQEERKTLPIYPY 135
+ + + V ++ +D D E ++ E+ ++ E + + +Q++R LP++
Sbjct: 394 KYSK-QTVRDEDVDHSSDE----EGYIPINKEMQRRAFVVEVNRTDSIQQQRALLPVFAE 448
Query: 136 RDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK------QGKVGCTQPXXXXXX 189
+++AV + +++ GETGSGKTTQ+PQ+L+EAG+ G +G TQP
Sbjct: 449 EHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAV 508
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEK-----TILKYMTDGMLLREILSEPNLESY 244
E+G GH VGY IRF+ + T LK+MTDG+LLRE++++ L Y
Sbjct: 509 SMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMMTDFLLAKY 567
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFR-----------SDLKLLISSATLDAEKFSD- 292
S +++DEAHER ++TDIL G+L ++K R LKL+I SATL FS+
Sbjct: 568 SAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATLRVSDFSEN 627
Query: 293 ---YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
+ PI + R+YPV IH+ K DY++ A +IH G IL+FLTGQ
Sbjct: 628 PALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGILIFLTGQN 687
Query: 350 EIET 353
EI T
Sbjct: 688 EITT 691
Score = 449 (163.1 bits), Expect = 3.4e-82, Sum P(3) = 3.4e-82
Identities = 94/234 (40%), Positives = 138/234 (58%)
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EE E +E + S++ L + P+Y+ LPT+ Q K+FE P G+R ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TSLTI GI+YV+D G SK + YN G++S V +SKASA QRAGR+GRTGPG C+RLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXX 528
+ + +VPEI R ++VL +KS+GID + NF F PP
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVI 927
Query: 529 XXXXXXXG-ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN 581
++T +G++M+ FPL P +K+++ ++ +C II I + LSVG+
Sbjct: 928 LGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGD 981
Score = 41 (19.5 bits), Expect = 3.4e-82, Sum P(3) = 3.4e-82
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 647 DQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSA 683
D L+ L ++V++ + N + A+K+ I SGF A
Sbjct: 1075 DGLQ-LEQKVKLPIP-NKKQVSAMKQMIASGFIDQVA 1109
Score = 39 (18.8 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 28/151 (18%), Positives = 62/151 (41%)
Query: 29 NQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFED 88
N++ R + ++ L A +K F Q+ EE + + + + + S V E+
Sbjct: 9 NEKARAGMLAKQAALKKARNKQ--FYRQDDEEETETTPDTTEIFNTQDSNSEILAPVTEE 66
Query: 89 KIDFIRDSVIDGENLDELHS--ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEY 146
+ R ++ +NL +S E ++K+K + + + K ++L + +
Sbjct: 67 E-RLARKRALE-QNLYSENSKKEKMSRAKKKRLDKYIDHQLKREEKKILLEKLAETKMDT 124
Query: 147 QVLVIVGETGSGKTTQIPQYLHEAGYTKQGK 177
+ E G GK T+ + + +QG+
Sbjct: 125 SNFAALKELGKGKQTKKEEMIEALELERQGR 155
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 460 (167.0 bits), Expect = 2.2e-81, Sum P(3) = 2.2e-81
Identities = 124/403 (30%), Positives = 199/403 (49%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEILKHR 361
+RY + + + + +D ++ L I + + G ILVFL G + I T ++L +
Sbjct: 454 QRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 513
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
K II P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID
Sbjct: 514 VMFKSDKF---IIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 570
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +DD
Sbjct: 571 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASL-LDDYQ 629
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+PEI RT L + L +K L + + +F +DPP ELT
Sbjct: 630 LPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELT 689
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
+G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD R
Sbjct: 690 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKVADARRK 748
Query: 600 NFHLGNVGDHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL 653
DH+ ++ + W + Y +C+E ++ +++ +++ Q E LL
Sbjct: 749 ELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 808
Query: 654 ------ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKN 688
R + SN+N D + I KA I +G +P AK++ N
Sbjct: 809 GAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAKIRLN 851
Score = 400 (145.9 bits), Expect = 2.2e-81, Sum P(3) = 2.2e-81
Identities = 112/352 (31%), Positives = 180/352 (51%)
Query: 23 DEEGHVNQEKRFAVSLQRYNLDS-AGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSND 81
DEE ++ FA Y ++ A +K N E E+ + + + ++K D
Sbjct: 112 DEEAQISW---FAPEDHGYGTEAPAENKPNSVKNVEHQEKKMINQEKRPFRIRDKYIDRD 168
Query: 82 YEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQ 141
EY+ ++ D+ +D + L++L K + +EM Q R+ LP Y + EL+
Sbjct: 169 SEYLLQENEP---DATLDQQLLEDLQK----KKTDLRYIEM-QRFREKLPSYGMQKELVN 220
Query: 142 AVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXX 196
++ +QV VI GETG GKTTQ+ Q++ + Y ++GK + CTQP
Sbjct: 221 MIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCTQPRRISAISVAERVA 279
Query: 197 QEMGVKLGH--EVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMVDEA 252
E G+ GY IR + K +IL Y T G++L+ + S+P+L S S +++DE
Sbjct: 280 AERAESCGNGNSTGYQIRLQSRLPRKQGSIL-YCTTGIILQWLQSDPHLSSVSHIVLDEI 338
Query: 253 HERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIH 312
HER L +D+L ++KDL+ +R DLK+++ SATL+AEKFS+YFG+ P+ IPG +PV +
Sbjct: 339 HERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VE 397
Query: 313 YTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRG 364
Y + I V + H +Q + ++E E + I K R G
Sbjct: 398 YLLEDIIEKI--RYVPEQKEHRSQFKKGFMQGHVNRQEKEEKEAIYKERWPG 447
Score = 75 (31.5 bits), Expect = 2.2e-81, Sum P(3) = 2.2e-81
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWTV-----KHPQRVHIHPSSGLAQVLP 713
SN+N D + I KA I +G +P AK++ N G + K V IHP S +
Sbjct: 823 SNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTE 882
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 883 FNYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 913
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 452 (164.2 bits), Expect = 2.8e-81, Sum P(4) = 2.8e-81
Identities = 99/244 (40%), Positives = 145/244 (59%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV- 178
L +QE R LP+ +++AV +++ +V+ GETGSGKTTQ+PQ+L+EAG+ G +
Sbjct: 242 LPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGII 301
Query: 179 GCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSE 238
G T+P EM + G V Y IR+E +E T +K MTDG+LL+EI +
Sbjct: 302 GVTEPRRVAAISMSHRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLKEIQRD 360
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD-- 292
L+ YSV+++DEAHER++ TDIL GLL ++ R+ +KL+I SATL E F++
Sbjct: 361 FLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENK 420
Query: 293 -YFGSAP-IFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
F S P + K+ R++ V +H+ K P DY + +IH PG ILVFLTGQ
Sbjct: 421 RLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQA 480
Query: 350 EIET 353
E+ +
Sbjct: 481 EVHS 484
Score = 352 (129.0 bits), Expect = 2.8e-81, Sum P(4) = 2.8e-81
Identities = 95/247 (38%), Positives = 132/247 (53%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QAK+F P P G+R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V IS+ASA QRAGR+GRT PG C+RLY+ + D + EI R +
Sbjct: 640 RVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFG-DFSLFSEAEITRRPVE 698
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX---XXXGELTKV------- 541
++VL +K L I+ +VNF F PP G L+++
Sbjct: 699 DLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSC 758
Query: 542 -----GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF--Y-RPKDKQVH 593
GR MA FP+ P +KM+ + C IITI + ++V IF Y RP +
Sbjct: 759 PISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTV-REIFEDYDRPAGSE-- 815
Query: 594 ADNARMN 600
+N +M+
Sbjct: 816 EENVKMS 822
Score = 126 (49.4 bits), Expect = 2.8e-81, Sum P(4) = 2.8e-81
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 700 VHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
V IHPSS L + LP +VVY E++ TTK YMR V ++ +W+ ++ P Y E+
Sbjct: 956 VFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFSAPEE 1011
Score = 96 (38.9 bits), Expect = 7.8e-55, Sum P(5) = 7.8e-55
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP---KDKQV 592
++ +GR MA FP+ P +KM+ + C IITI + ++V + RP +++ V
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRPAGSEEENV 819
Query: 593 H-----ADNARMN-FHLGN-----VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
A + +M G +GD + LL + + Q+C EN ++ ++M
Sbjct: 820 KMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLE 879
Query: 642 ARDIRDQLEGLLERV 656
R +R QL + V
Sbjct: 880 IRRLRGQLTNAVNAV 894
Score = 49 (22.3 bits), Expect = 2.8e-81, Sum P(4) = 2.8e-81
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 64 MGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDG---ENLDELHS-ELPDKSKEKSA 119
MG+ K+ K + QS + D+ ++ + DG + +D+ ++ LP +K
Sbjct: 1 MGRLRKKHNWKGRQQSTSVQTAAADRQTNVQVEIQDGAVLKGVDDCNALVLPATKTKKQK 60
Query: 120 LEMLQEERKTL 130
+E ++K L
Sbjct: 61 VERPVTKKKAL 71
Score = 49 (22.3 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISS-ATLDAEKFSDYFGSAP 298
NL++YS L VDE E D G+ +D + SDL+L + D E+ +D S P
Sbjct: 528 NLDNYSALPVDEGDE-----DRQAGIDEDDGE-GSDLELELGDHPDTDHEEKAD--PSIP 579
Query: 299 IFKIP 303
++ +P
Sbjct: 580 LYVLP 584
Score = 47 (21.6 bits), Expect = 4.6e-81, Sum P(4) = 4.6e-81
Identities = 17/74 (22%), Positives = 41/74 (55%)
Query: 56 QEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSE-LPDKS 114
+EA EE + ++ + S++ + S + + E+K + + + ++ +E + L +++
Sbjct: 156 READEEEEENESEMSESSEDDDDSEESDSSEEEK-----EKISEEKHTEEQQQQVLKEET 210
Query: 115 KEKSALEMLQEERK 128
K K A +M +EE+K
Sbjct: 211 KPKEA-DM-KEEKK 222
Score = 40 (19.1 bits), Expect = 2.5e-80, Sum P(4) = 2.5e-80
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 65 GKASLKYGS------KNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKS 118
G +S+K S K + ++++ E E ++ + D E D E S+EK
Sbjct: 138 GSSSVKISSLSGANRKRRREADEEEEENESEMSESSEDDDDSEESDSSEEEKEKISEEKH 197
Query: 119 ALEMLQEERK 128
E Q+ K
Sbjct: 198 TEEQQQQVLK 207
Score = 38 (18.4 bits), Expect = 7.8e-55, Sum P(5) = 7.8e-55
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 425 SKVKSYN-PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
+K K+ + PR +++ P+ + ++AG G G L + D ++ P
Sbjct: 517 AKKKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHPDTDHEEKADP 576
Query: 484 EI 485
I
Sbjct: 577 SI 578
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 450 (163.5 bits), Expect = 7.1e-81, Sum P(3) = 7.1e-81
Identities = 101/239 (42%), Positives = 141/239 (58%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
+QEER LPI +++AV E+ +++I GETGSGKTTQ+PQ+L+EAGY+ V G T
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
+P +EM + V Y IR+E +E+T +K+MTDG+LL+EI + L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD----Y 293
Y V+++DEAHER++ TDIL GLL ++ R LKLLI SATL E F+ +
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLF 421
Query: 294 FGSAPIFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
P+ K+ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 422 TQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 480
Score = 358 (131.1 bits), Expect = 7.1e-81, Sum P(3) = 7.1e-81
Identities = 86/223 (38%), Positives = 124/223 (55%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ + D + PEI R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEKYPPPEITRRPVE 704
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGE-------------- 537
+++L +K+L I+ ++NF F PP +
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 538 -LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T++GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 765 PITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTV 807
Score = 128 (50.1 bits), Expect = 7.1e-81, Sum P(3) = 7.1e-81
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 663 NLNDLDAIKKAITSGFFPHSA-KLQKNG---SYW--TVKHP---QRVHIHPSSGLAQVLP 713
N + + +++ +T+G H A K+Q W K P V IHPSS L + LP
Sbjct: 916 NEDQVTYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVLFKELP 975
Query: 714 RWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL-KDVED 755
+VVY E+V TTK YM+ V+ + +W+ + P Y Q K +E+
Sbjct: 976 EFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEE 1018
Score = 97 (39.2 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP--KDKQV- 592
+T++GR MA FP+ P +KM+ S + C ITI A ++V RP D+++
Sbjct: 766 ITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELFEELDRPAASDEELA 825
Query: 593 -----HADNARMN-FHLGN-----VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
A A+M G +GD + LL + S Q+C N ++ ++M
Sbjct: 826 RLKGKRARVAQMKRIWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMME 885
Query: 642 ARDIRDQL 649
R +R QL
Sbjct: 886 IRRLRGQL 893
Score = 38 (18.4 bits), Expect = 3.7e-36, Sum P(4) = 3.7e-36
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 236 LSEPNLESYSVLMVDEAHE 254
L + +L+SYSVL E E
Sbjct: 529 LPQISLDSYSVLPAGEGDE 547
Score = 37 (18.1 bits), Expect = 3.7e-36, Sum P(4) = 3.7e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQR 40
++R P+ D+ V + +RF S R
Sbjct: 495 RHRPPEKDDQRDSVEETRRFKKSRAR 520
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 178/509 (34%), Positives = 292/509 (57%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-EIHYTKAPEAD-----YIDAAI 326
++++K+++ SATL+ +K S++FG + IPGR YPV EI D Y+ A+
Sbjct: 150 KTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAV 209
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSK-------IAELIICPIYA 379
L IH+ + GDILVFLTGQ EIE A ++L + + + I L+I P+Y
Sbjct: 210 KVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYG 269
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P+G RK V++TNIA TSLTI+G++YV+D GF K ++NPR G++ L
Sbjct: 270 SMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDIL 329
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ AMQRAGR+GRT GK +RLY+ + + M D+TVPEI+RT+L +V+L LK
Sbjct: 330 EVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKC 389
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXX--XXXXXXXGELTKVGRRMAEFPLDPMLSKM 557
L + D++ F ++D P G +T++G + +FPL P LS
Sbjct: 390 LSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCA 449
Query: 558 IVASDKDKCSDEIITIAAMLSVGNSIFYRPKD--KQVHAD--NARMNFHLGNVGDHIALL 613
++ + C D ++ IAAMLSV N +F RP D KQ A+ + ++ +G D LL
Sbjct: 450 VIKAASLDCEDMLLPIAAMLSVEN-VFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLL 508
Query: 614 RVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI-----EVTSNLNDLD 668
++ + + WC++ +I R++K A + QL + +++ + T + +
Sbjct: 509 NIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRTE 568
Query: 669 AIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTT 725
+++ + +G+F + A+ ++ T+ H V+IHPSS L R W+++H++ +T+
Sbjct: 569 LLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTS 628
Query: 726 KEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
K Y+R V ++ EW+ ++ P +Q+ E
Sbjct: 629 KIYVRTVCPVRYEWVKDLLPRLHQIDAYE 657
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 116/241 (48%), Positives = 159/241 (65%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LPI +R L++AV+E L++ GETGSGK+TQ+P+YL+EAG + G +G TQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
+EMG LG VGY +RF+DC+SE+T +KYMTDG LLR IL++P L YS++++
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 250 DEAHERTLSTDILFGLLKDLIKF------RSDLKLLISSATLDAEKFSDYFGSAPIFKIP 303
DEAHER+LSTDILFGLLK L ++++K+++ SATL+ +K S++FG + IP
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 304 GRRYPV-EIHYTKAPEAD-----YIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEI 357
GR YPV EI D Y+ A+ L IH+ + GDILVFLTGQ EIE A ++
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 358 L 358
L
Sbjct: 241 L 241
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 148/258 (57%), Positives = 212/258 (82%)
Query: 197 QEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERT 256
+EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLRE L E +L+ YS +++DEAHER+
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERS 68
Query: 257 LSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKA 316
L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV+I ++K
Sbjct: 69 LNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKT 128
Query: 317 PEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE-TADEILKHRTRGLGSKIAELIIC 375
P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE T+D+I++H L + A L +
Sbjct: 129 PQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE-LENAPA-LAVL 186
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NPR G
Sbjct: 187 PIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIG 246
Query: 436 MESLLVHPISKASAMQRA 453
M++L ++PIS+A+A QR+
Sbjct: 247 MDALQIYPISQANANQRS 264
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 450 (163.5 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 100/239 (41%), Positives = 142/239 (59%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
+QEER LPI +++AV E+ ++++ GETGSGKTTQ+PQ+L+EAGY+ + G T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
+P +EM + V Y IR+E +E+T +K+MTDG+LL+EI + L
Sbjct: 299 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 357
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD---YF 294
Y V+++DEAHER++ TDIL GLL ++ R+ LKLLI SATL E F+ F
Sbjct: 358 LRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLF 417
Query: 295 GSAP-IFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
P + K+ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 418 PQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 476
Score = 358 (131.1 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 86/223 (38%), Positives = 123/223 (55%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ + D + PEI R +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-SDFEQFPPPEITRRPVE 700
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGE-------------- 537
+++L +K+L I+ ++NF F PP +
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 538 -LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTV 803
Score = 122 (48.0 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 687 KNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
KN +Y T V IHPSS L + LP +VVY E++ TTK YM+ V+ ++ +W+ + P
Sbjct: 946 KN-AYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPS 1004
Query: 747 YYQL-KDVED 755
Y Q K +E+
Sbjct: 1005 YCQFDKPLEE 1014
Score = 99 (39.9 bits), Expect = 3.9e-53, Sum P(3) = 3.9e-53
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP-------- 587
+T +GR MA FP+ P +KM+ S + C ITI A ++V RP
Sbjct: 762 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELFEELDRPAASDEELG 821
Query: 588 --KDKQVH-ADNARMNFHLG---NVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
KDK+ A R+ G +GD + LL + S Q+C N ++ ++M
Sbjct: 822 QLKDKRARVAQMKRIWAGQGASLKLGDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMME 881
Query: 642 ARDIRDQL 649
R +R QL
Sbjct: 882 IRRLRGQL 889
Score = 43 (20.2 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
P KE+ L+ + E+++ R E+LQ ++E QV
Sbjct: 71 PLTKKERKMLQKILEQKEKKS---QRAEMLQKLSEVQV 105
Score = 39 (18.8 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 235 ILSEPNLESYSVLMVDEAHE 254
+L + +L+SYSVL E E
Sbjct: 524 MLPQISLDSYSVLPAGEGDE 543
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 447 (162.4 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 99/239 (41%), Positives = 143/239 (59%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
+QEER LPI +++AV E+ ++++ GETGSGKTTQ+PQ+L+EAG++ + + G T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
+P +EM + V Y IR+E +E+T +K+MTDG+LL+EI + L
Sbjct: 92 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 150
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD---YF 294
Y V+++DEAHER++ TDIL GLL ++ R+ LKLLI SATL E F+ F
Sbjct: 151 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 210
Query: 295 GSAP-IFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
P + K+ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 211 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 269
Score = 352 (129.0 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 86/223 (38%), Positives = 123/223 (55%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ + D + PEI R +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPPEITRRPVE 493
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX--XXGE------------ 537
+++L +K+L ++ ++NF F PP E
Sbjct: 494 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 538 -LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 554 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 596
Score = 126 (49.4 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 670 IKKAITSGFFPHSAKLQKNGSY----W--TVKHP---QRVHIHPSSGLAQVLPRWVVYHE 720
+++ +T+G H A+ ++ W K P V IHPSS L + LP +VVY E
Sbjct: 712 LRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQE 771
Query: 721 LVLTTKEYMRQVTELKPEWLVEIAPHYYQL-KDVED 755
+V TTK YM+ V+ ++ +W+ + P Y Q K +E+
Sbjct: 772 IVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEE 807
Score = 93 (37.8 bits), Expect = 4.2e-53, Sum P(3) = 4.2e-53
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP--KDKQV- 592
+T +GR MA FP+ P +KM+ S + C ITI A ++V RP D+++
Sbjct: 555 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 614
Query: 593 -----HADNARMN-FHLGN-----VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
A A+M G +GD + LL + + + Q+C N ++ ++M
Sbjct: 615 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 674
Query: 642 ARDIRDQLEGLLERV----EIEVTSNL-----NDLDAIKKAITSGFFPHSAK 684
R +R QL + V E+ V + + + +++ +T+G H A+
Sbjct: 675 IRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLAR 726
Score = 51 (23.0 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 234 EILSEPNLESYSVLMVDEAHE-RTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
E+L + NL+ YSVL E E R D G L SDL L + D + D
Sbjct: 317 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALD------SDLDLDLGDGGQDGGEQPD 370
Query: 293 YFGSAPIFKIP 303
S P+ +P
Sbjct: 371 --ASLPLHVLP 379
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 456 (165.6 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 101/240 (42%), Positives = 144/240 (60%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
+QEER LPI +++AV E+ ++++ GETGSGKTTQ+PQ+L+EAGY+ + + G T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
+P +EM L H V Y IR+E +E+T +K+MTDG+LL+EI +
Sbjct: 301 EPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 358
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD---- 292
L Y V+++DEAHER++ TDIL GLL ++ R+ LKLLI SATL E F+
Sbjct: 359 LLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRL 418
Query: 293 YFGSAPIFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
+ P+ K+ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 419 FTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 478
Score = 349 (127.9 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 84/223 (37%), Positives = 122/223 (54%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ + D + PEI R +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPPEITRRPVE 699
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGE-------------- 537
+++L +K+L I+ ++NF F PP +
Sbjct: 700 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 538 -LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T +GR M+ FP+ P +KM+ S + C I I A ++V
Sbjct: 760 PITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTV 802
Score = 123 (48.4 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 687 KNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
KN +Y T V IHPSS L + LP +VVY E+V TTK YM+ V+ ++ +W+ + P
Sbjct: 945 KN-AYKTPLLDDPVFIHPSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPS 1003
Query: 747 YYQ 749
Y Q
Sbjct: 1004 YCQ 1006
Score = 82 (33.9 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 32/128 (25%), Positives = 54/128 (42%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP-------- 587
+T +GR M+ FP+ P +KM+ S + C I I A ++V RP
Sbjct: 761 ITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFEELDRPAASEEELA 820
Query: 588 --KDKQVHADNARMNFH-LG---NVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
K ++ + + G +GD + LL + S Q+C N ++ ++M
Sbjct: 821 ELKGRRTRVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLE 880
Query: 642 ARDIRDQL 649
R +R QL
Sbjct: 881 IRRLRGQL 888
Score = 45 (20.9 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
P KE+ L+ + E+++ R ELLQ ++E QV
Sbjct: 70 PLTKKERKVLQKVLEQKEKKS---QRAELLQKLSEVQV 104
Score = 40 (19.1 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 236 LSEPNLESYSVLMVDEAHE 254
L + NL++YSVL E E
Sbjct: 525 LPQINLDNYSVLPAGEGDE 543
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 447 (162.4 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 99/239 (41%), Positives = 143/239 (59%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
+QEER LPI +++AV E+ ++++ GETGSGKTTQ+PQ+L+EAG++ + + G T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
+P +EM + V Y IR+E +E+T +K+MTDG+LL+EI + L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD---YF 294
Y V+++DEAHER++ TDIL GLL ++ R+ LKLLI SATL E F+ F
Sbjct: 364 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 423
Query: 295 GSAP-IFKIPGRRYPVEIHYTK-APEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
P + K+ R++PV +H+ K P DY V +IH G ILVFLTGQ E+
Sbjct: 424 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 482
Score = 352 (129.0 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 86/223 (38%), Positives = 123/223 (55%)
Query: 372 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYN 431
L + P+Y+ L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 432 PRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA 491
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ + D + PEI R +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPPEITRRPVE 706
Query: 492 NVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX--XXGE------------ 537
+++L +K+L ++ ++NF F PP E
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 538 -LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 767 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 809
Score = 126 (49.4 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 670 IKKAITSGFFPHSAKLQKNGSY----W--TVKHP---QRVHIHPSSGLAQVLPRWVVYHE 720
+++ +T+G H A+ ++ W K P V IHPSS L + LP +VVY E
Sbjct: 925 LRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQE 984
Query: 721 LVLTTKEYMRQVTELKPEWLVEIAPHYYQL-KDVED 755
+V TTK YM+ V+ ++ +W+ + P Y Q K +E+
Sbjct: 985 IVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEE 1020
Score = 93 (37.8 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSI--FYRP--KDKQV- 592
+T +GR MA FP+ P +KM+ S + C ITI A ++V RP D+++
Sbjct: 768 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 827
Query: 593 -----HADNARMN-FHLGN-----VGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
A A+M G +GD + LL + + + Q+C N ++ ++M
Sbjct: 828 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 887
Query: 642 ARDIRDQLEGLLERV----EIEVTSNL-----NDLDAIKKAITSGFFPHSAK 684
R +R QL + V E+ V + + + +++ +T+G H A+
Sbjct: 888 IRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLAR 939
Score = 51 (23.0 bits), Expect = 4.9e-37, Sum P(3) = 4.9e-37
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 234 EILSEPNLESYSVLMVDEAHE-RTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
E+L + NL+ YSVL E E R D G L SDL L + D + D
Sbjct: 530 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALD------SDLDLDLGDGGQDGGEQPD 583
Query: 293 YFGSAPIFKIP 303
S P+ +P
Sbjct: 584 --ASLPLHVLP 592
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 181/516 (35%), Positives = 286/516 (55%)
Query: 261 ILFGLLKDLIKFRSD-LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--AP 317
+L L +D R + LK+++ SAT++ K S +FG+ PIF IPGR YPV + P
Sbjct: 188 LLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 318 E----ADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG------- 366
YI A + + IH+ + GDILVFLTGQ EIE + E+L +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 367 SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSK 426
+ + L+I P Y ++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 427 VKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQ 486
++NPR G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 487 RTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMA 546
RT+L +VVL LK L I D++ F ++DPP G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 547 EFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD----KQVHADNARMNFH 602
EFPL P L+ ++ + C D ++ IAAMLSV N +F RP D K+ + +
Sbjct: 488 EFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQKHRELAAK 546
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-- 660
G D L ++ + WC +++I R + A + QL L+ +++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 661 ---TSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR-- 714
T + +++ + +G+F + A+ ++ T+ VHIHPSS L + +
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 715 WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
W+++HE+++TTK Y R V ++ EW+ ++ P ++L
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEL 702
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 123/276 (44%), Positives = 172/276 (62%)
Query: 99 DGENLDELHSELPDKSK--EKSALEMLQEERKTLPIYPY---RDELLQAVNEYQVLVIVG 153
+GE EL E P + ++ +E T P +P R +L+QAV + L++ G
Sbjct: 17 EGERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 181/516 (35%), Positives = 286/516 (55%)
Query: 261 ILFGLLKDLIKFRSD-LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--AP 317
+L L +D R + LK+++ SAT++ K S +FG+ PIF IPGR YPV + P
Sbjct: 188 LLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 318 E----ADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG------- 366
YI A + + IH+ + GDILVFLTGQ EIE + E+L +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 367 SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSK 426
+ + L+I P Y ++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 427 VKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQ 486
++NPR G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIK 427
Query: 487 RTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMA 546
RT+L +VVL LK L I D++ F ++DPP G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 547 EFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL--- 603
EFPL P L+ ++ + C D ++ IAAMLSV N +F RP D + + + + L
Sbjct: 488 EFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 604 -GNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-- 660
G D L ++ + WC +++I R + A + QL L+ +++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 661 ---TSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR-- 714
T + +++ + +G+F + A+ ++ T+ VHIHPSS L + +
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 715 WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
W+++HE+++TTK Y R V ++ EW+ ++ P ++L
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEL 702
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 123/276 (44%), Positives = 172/276 (62%)
Query: 99 DGENLDELHSELPDKSK--EKSALEMLQEERKTLPIYPY---RDELLQAVNEYQVLVIVG 153
+GE EL E P + ++ +E T P +P R +L+QAV + L++ G
Sbjct: 17 EGERPIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 476 (172.6 bits), Expect = 3.3e-79, Sum P(2) = 3.3e-79
Identities = 129/423 (30%), Positives = 214/423 (50%)
Query: 336 QSPGDILVFLTGQEEIETADEILK-HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP 394
+ PG IL+FLTG ++I + E L+ H G + L+ C + ++ T Q IFE
Sbjct: 496 EGPGGILIFLTGWDDISSLKEKLQIHPIFG-NPDLVMLLAC--HGSMETFEQRLIFEEPA 552
Query: 395 EGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAG 454
G RK+VLATNIAETS+TI+ + +VID G +K SY+ LL ISK SA QR G
Sbjct: 553 SGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG 612
Query: 455 RSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF--DFID 512
R+GR PG+C+ LY Y + +PEI RT L ++ L +KSL + + F +
Sbjct: 613 RAGRVRPGQCYHLYPKCVYDA-FAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 671
Query: 513 PPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIIT 572
P +LT +GR +++ P++P L KM++ C D I+T
Sbjct: 672 SPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILT 731
Query: 573 IAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYST---QWC 629
+AA LSV + F P+DK+ A+ A+ F + DH+AL+R Y W++ + +C
Sbjct: 732 VAAGLSVRDP-FLTPQDKKDLAEAAKSQFSRDH-SDHLALVRAYEGWKKAEEESAVYDYC 789
Query: 630 YENYIQVRSMKRARDIRDQL------EGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSA 683
++N++ ++S++ +R + GL++ S ND + + I G +P
Sbjct: 790 WKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGIC 849
Query: 684 KLQKNGSYWTVKHPQ--RVHIHPSSGLAQV--LPR-WVVYHELVLTTKEYMRQVTELKPE 738
+ N +++K + +V ++ +S A+ +P W+V++E + ++R T
Sbjct: 850 SVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDS 909
Query: 739 WLV 741
L+
Sbjct: 910 TLI 912
Score = 396 (144.5 bits), Expect = 3.3e-79, Sum P(2) = 3.3e-79
Identities = 84/197 (42%), Positives = 117/197 (59%)
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY-TKQG--- 176
+ + + R +LP + R +L A+++ QV+VI GETG GKTTQIPQ++ E+ +G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFS 270
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
+ CTQP E G +LG VGY +R E T L + T G+LLR +L
Sbjct: 271 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLL 330
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+ NL + ++VDE HER ++ D L +LKDL+ RS+LKL++ SATLDAE FS YFG
Sbjct: 331 VDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGG 390
Query: 297 APIFKIPGRRYPVEIHY 313
A + IPG YPV H+
Sbjct: 391 AGVIYIPGFTYPVRSHF 407
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 178/508 (35%), Positives = 282/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 381 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 440
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 441 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 500
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 501 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDL 707
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 123/276 (44%), Positives = 169/276 (61%)
Query: 99 DGENLDELHSELPDKS-----KEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE +L E P +EK T PI R +L+QAV + L++ G
Sbjct: 17 EGERSRDLQEERPSAGSVADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 178/508 (35%), Positives = 282/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 381 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 440
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 441 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 500
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 501 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDL 707
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 123/276 (44%), Positives = 169/276 (61%)
Query: 99 DGENLDELHSELPDK-----SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE +L E P +EK T PI R +L+QAV + L++ G
Sbjct: 17 EGERSRDLQEERPSAVTIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 178/508 (35%), Positives = 282/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 279 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 338
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 339 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 398
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 399 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 458
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 459 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 518
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 519 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 578
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 579 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 637
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 638 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 697
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK
Sbjct: 698 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 757
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 758 YARIVCPIRYEWVRDLLPKLHEFNAHDL 785
Score = 583 (210.3 bits), Expect = 2.4e-56, P = 2.4e-56
Identities = 123/276 (44%), Positives = 169/276 (61%)
Query: 99 DGENLDELHSELPDK-----SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE +L E P +EK T PI R +L+QAV + L++ G
Sbjct: 95 EGERSIDLQEERPSAVSIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 154
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 155 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRF 214
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 215 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 274
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 275 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 334
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 335 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 370
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 178/508 (35%), Positives = 282/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 381 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 440
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 441 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 500
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 501 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVL 619
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDL 707
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 122/277 (44%), Positives = 171/277 (61%)
Query: 99 DGENLDELHSE------LPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIV 152
+GE +L E + D+ +EK T PI R +++QAV + L++
Sbjct: 17 EGERSRDLQEERLSAVCIADR-EEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVT 75
Query: 153 GETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 212
G TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 213 FEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF 272
F+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L +
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 195
Query: 273 RSD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADY 321
+S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 322 IDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
I A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 178/508 (35%), Positives = 282/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 124 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 183
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 184 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 243
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 244 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 303
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 304 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 363
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 364 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 423
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 424 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 482
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 483 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVL 542
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++TTK
Sbjct: 543 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 602
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 603 YARIVCPIRYEWVRDLLPKLHEFNAHDL 630
Score = 348 (127.6 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 75/150 (50%), Positives = 100/150 (66%)
Query: 220 KTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD---- 275
+T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +S
Sbjct: 66 ETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKE 125
Query: 276 -LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAIVT 328
LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 126 HLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKV 185
Query: 329 VLQIHVTQSPGDILVFLTGQEEIETADEIL 358
+ IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 186 TMDIHLNEMAGDILVFLTGQFEIEKSCELL 215
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 468 (169.8 bits), Expect = 9.6e-79, Sum P(2) = 9.6e-79
Identities = 134/432 (31%), Positives = 210/432 (48%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEILKHR 361
RRY + + E D +D ++ L I + + G ILVFL G + I T ++L +
Sbjct: 366 RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 425
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
K +I P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID
Sbjct: 426 VMFKSDKF---LIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 482
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +DD
Sbjct: 483 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQ 541
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+PEI RT L + L +K L + + F +DPP ELT
Sbjct: 542 LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT 601
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
+G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD R
Sbjct: 602 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRK 660
Query: 600 NFHLGNVGDHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL 653
DH+ ++ + W E Y +C+E ++ +++ +++ Q E LL
Sbjct: 661 ELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 720
Query: 654 ------ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS 705
R + SN+N D + I KA I +G +P AK++ N K + V ++
Sbjct: 721 GAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVYTK 776
Query: 706 S-GLAQVLPRWV 716
+ GL V P+ V
Sbjct: 777 TDGLVAVHPKSV 788
Score = 392 (143.0 bits), Expect = 9.6e-79, Sum P(2) = 9.6e-79
Identities = 102/288 (35%), Positives = 156/288 (54%)
Query: 84 YVFEDKIDFIRDSVIDGENLDE-LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQA 142
Y+ D ++++ DG LD+ L +L K + +EM Q R+ LP Y + EL+
Sbjct: 76 YIDRDSEYLLQENEPDG-TLDQKLLEDLQKKKNDLRYIEM-QHFREKLPSYGMQKELVNL 133
Query: 143 VNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXXQ 197
++ +QV VI GETG GKTTQ+ Q++ + Y ++GK + CTQP
Sbjct: 134 IDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCTQPRRISAISVAERVAA 192
Query: 198 EMGVKLG--HEVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAH 253
E G + GY IR + K +IL Y T G++L+ + S+P L S S +++DE H
Sbjct: 193 ERAESCGSGNSTGYQIRLQSRLPRKQGSIL-YCTTGIILQWLQSDPYLSSVSHIVLDEIH 251
Query: 254 ERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
ER L +D+L ++KDL+ FRSDLK+++ SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 252 ERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 310
Query: 314 TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
+ I V + H +Q + ++E E + I K R
Sbjct: 311 LLEDVIEKI--RYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKER 356
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 206/648 (31%), Positives = 337/648 (52%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQ--VLVIVGETGSGKTTQIPQYLHE----AGYTKQG 176
L E+R++LP++ R L+ + V+++ GE G GK+TQIPQ+ E G+ K G
Sbjct: 38 LLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQK-G 96
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
V TQP EM + LGHEVGYSI EDCT T+L++ D +LL+E+
Sbjct: 97 WVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYF 294
S + VL++DEA ER++++D+L GLL+D L DL++++ + K D++
Sbjct: 157 STRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLEPKLQDFW 216
Query: 295 GSAPIFKIPGRR--YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
G P +P + P ++ P AD +DAA VL+ ++PGD+LV+L +EEI
Sbjct: 217 GGPPTVCVPRKTGSCPTPVYRDSLP-ADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEIS 275
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
E L + R L ++ + P++ +QA ++E T GARKVV+ +A+ S +
Sbjct: 276 LCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFS 334
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+ I++VID G Y+P+ ES ++ P+SK A R R+ PG C LY
Sbjct: 335 LPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSF 394
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXX 532
+ P + NL++++L+LK I + F+D P
Sbjct: 395 LELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAAL 454
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G+L+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ F RP V
Sbjct: 455 DDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---V 510
Query: 593 HADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEG 651
A+ A + L +V GDH +L++VY ++ + WC + ++ +AR +R +L
Sbjct: 511 CAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLE 570
Query: 652 LLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPS 705
L++R+E+ ++ S N D ++KA+ SG+F A+ G+Y + H + P+
Sbjct: 571 LMQRIELPLSQPAFGSERNRRD-LQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPN 629
Query: 706 ----SGLAQVLPR-WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
S A P WV+YH ++ + V+E++P+ LVE+AP Y+
Sbjct: 630 CCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYF 677
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 384 (140.2 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 88/237 (37%), Positives = 130/237 (54%)
Query: 344 FLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLA 403
F G+E+I T D+ + G L + P+Y+ LPT Q ++F+ P G+R VV+A
Sbjct: 827 FEIGKEDIITEDD---EKPAG------PLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVA 877
Query: 404 TNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGK 463
TN+AETSLTI IKYV+D G K + YN G+ S V SKASA QRAGR+GRTGPG
Sbjct: 878 TNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGH 937
Query: 464 CFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXX 523
C+R+Y+ ++ + PEI + ++L +KS+GI + F F PP
Sbjct: 938 CYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLAL 997
Query: 524 XXXXXXXXXXXXG-ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
+T++G +M++FP+ P SKM++ + C II I ++L+V
Sbjct: 998 RTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Score = 313 (115.2 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 72/221 (32%), Positives = 124/221 (56%)
Query: 68 SLKYGSKNKNQSNDYEYVFEDKIDFIRDSV---IDGENLDELHSELPDKSKEKSALEMLQ 124
S++ K + ++ + + I+ I D++ +D + ++ ++ K + K ++ +
Sbjct: 345 SIEVFGKEEEENREVFLSTKTGIETIEDAMSEEVDAKPIE--YNVFNVKVERKPEIDAV- 401
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ------GKV 178
R LPI +++ + + V++I GETGSGKTTQ+PQ+L+E+G+ + G +
Sbjct: 402 --RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGII 459
Query: 179 GCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFED-CTSEKTILKYMTDGMLLREILS 237
G TQP +E+ V+ G EVGY IR++ S +K+MTDG+L+RE+ +
Sbjct: 460 GVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQT 519
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKL 278
+ L YS +++DEAHER L+TDIL GLL ++ R L L
Sbjct: 520 DFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 152 (58.6 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 276 LKLLISSATLDAEKFSD----YFGSAPIFKIPGRRYPVEIHYTKAPE-ADYIDAAIVTVL 330
LKL++ SATL E F+ + P+ IP R++PV IH+ K E +YID V+
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 331 QIHVTQSPGDILVFLTGQEEIE 352
+IH G ILVF+TG++EIE
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIE 661
Score = 90 (36.7 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 702 IHPSSGLAQVLPR--WVVYHELVLTTKEYMRQVTELKPEWL 740
IHP+S L V + +V+Y +++ T++ YM+ VTE+ P WL
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 55 (24.4 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 588 KDKQVHADNAR--MNFHLGNVGDHIALLRVYNSWR-ECNYSTQ----WCYENYIQVRSMK 640
+++Q H R M L D +++L+V ++ + S + +C +N++ +SM
Sbjct: 1097 EERQKHLQRLRNSMRKWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMS 1156
Query: 641 RARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAI 674
+R QL ++ + +N ++LD I I
Sbjct: 1157 EIHKLRHQLTEIVNSIN---QTN-HELDPISNPI 1186
Score = 51 (23.0 bits), Expect = 2.4e-38, Sum P(5) = 2.4e-38
Identities = 23/97 (23%), Positives = 40/97 (41%)
Query: 4 DYDCCNNVKSL---QYRIPDAYD-EEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAW 59
D D N+ L Q+ + D + EE V +E+ ++ ++ + E+E
Sbjct: 741 DNDDIENLDVLNDDQFIVNDEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVE 800
Query: 60 EEHQMGKASLKYGSKNKNQSNDYEYVFE-DKIDFIRD 95
EE + + N N +N+ E FE K D I +
Sbjct: 801 EEEVEEEEEVDENENNNNNNNEDEDEFEIGKEDIITE 837
Score = 47 (21.6 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 39 QRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNKN 77
Q YN DS DK + +Q+ ++ + +++ S NKN
Sbjct: 174 QEYN-DSHQDKGSYLKDQQKEQDDSEDENTIELNSTNKN 211
Score = 47 (21.6 bits), Expect = 5.5e-39, Sum P(6) = 5.5e-39
Identities = 11/53 (20%), Positives = 29/53 (54%)
Query: 74 KNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEE 126
+N + ND +++ D+ + + + ++ E ++E E + +E+ E ++EE
Sbjct: 746 ENLDVLNDDQFIVNDEEE-VEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEE 797
Score = 45 (20.9 bits), Expect = 8.8e-39, Sum P(6) = 8.8e-39
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 74 KNKNQSNDYEYVFEDKIDFIRDSVIDGE-NLDELHSELPDKSKE 116
+N+N V+ D DF D+ +D N+D H + D +
Sbjct: 697 ENQNNIKSSNLVYGDAEDFDFDNTVDDTFNIDN-HDDDDDNDND 739
Score = 44 (20.5 bits), Expect = 4.2e-78, Sum P(7) = 4.2e-78
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 670 IKKAITSGFFPHSAKLQKNGSYWTVKHPQRV 700
IK+ IT+G +K+++ S HP+ +
Sbjct: 1207 IKQVITAGLIDQISKVKETQSITGKNHPKHL 1237
Score = 41 (19.5 bits), Expect = 4.9e-49, Sum P(6) = 4.9e-49
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 83 EYVFEDKIDFIRDSVIDGEN---LDELHSELPDK---SKEKSALEMLQEERKTLPIYPYR 136
E + +D D++ + +I+ + +L E D+ K+ A+E +EE+ + ++
Sbjct: 107 EKISDDWDDYL-EPIIEKSTPIEIPQLEPETLDRIEFDKQHKAIEKRREEKSKKKFFFWK 165
Query: 137 DELLQAVNEYQ 147
D+ ++ +YQ
Sbjct: 166 DQDVE--RDYQ 174
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 468 (169.8 bits), Expect = 5.1e-78, Sum P(2) = 5.1e-78
Identities = 134/432 (31%), Positives = 210/432 (48%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEILKHR 361
RRY + + E D +D ++ L I + + G ILVFL G + I T ++L +
Sbjct: 452 RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 511
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
K +I P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID
Sbjct: 512 VMFKSDKF---LIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVID 568
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +DD
Sbjct: 569 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQ 627
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+PEI RT L + L +K L + + F +DPP ELT
Sbjct: 628 LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT 687
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
+G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD R
Sbjct: 688 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRK 746
Query: 600 NFHLGNVGDHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL 653
DH+ ++ + W E Y +C+E ++ +++ +++ Q E LL
Sbjct: 747 ELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 806
Query: 654 ------ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS 705
R + SN+N D + I KA I +G +P AK++ N K + V ++
Sbjct: 807 GAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVYTK 862
Query: 706 S-GLAQVLPRWV 716
+ GL V P+ V
Sbjct: 863 TDGLVAVHPKSV 874
Score = 392 (143.0 bits), Expect = 5.1e-78, Sum P(2) = 5.1e-78
Identities = 102/288 (35%), Positives = 156/288 (54%)
Query: 84 YVFEDKIDFIRDSVIDGENLDE-LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQA 142
Y+ D ++++ DG LD+ L +L K + +EM Q R+ LP Y + EL+
Sbjct: 162 YIDRDSEYLLQENEPDG-TLDQKLLEDLQKKKNDLRYIEM-QHFREKLPSYGMQKELVNL 219
Query: 143 VNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXXQ 197
++ +QV VI GETG GKTTQ+ Q++ + Y ++GK + CTQP
Sbjct: 220 IDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCTQPRRISAISVAERVAA 278
Query: 198 EMGVKLG--HEVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAH 253
E G + GY IR + K +IL Y T G++L+ + S+P L S S +++DE H
Sbjct: 279 ERAESCGSGNSTGYQIRLQSRLPRKQGSIL-YCTTGIILQWLQSDPYLSSVSHIVLDEIH 337
Query: 254 ERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
ER L +D+L ++KDL+ FRSDLK+++ SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 338 ERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 396
Query: 314 TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
+ I V + H +Q + ++E E + I K R
Sbjct: 397 LLEDVIEKI--RYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKER 442
Score = 75 (31.5 bits), Expect = 8.7e-36, Sum P(2) = 8.7e-36
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWTV-----KHPQRVHIHPSSGLAQVLP 713
SN+N D + I KA I +G +P AK++ N G + K V +HP S +
Sbjct: 821 SNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTD 880
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 881 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 911
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 439 (159.6 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 116/382 (30%), Positives = 188/382 (49%)
Query: 322 IDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAE-LIICPIYAN 380
ID V I + G ILVFL G ++I IL G + + + + P+++
Sbjct: 406 IDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSL 465
Query: 381 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLL 440
+ + Q +F P G RKV+++T IAETS+TID + YVI+ G +K +Y+ T ++SL
Sbjct: 466 MQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLD 525
Query: 441 VHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSL 500
++KA+ QR GR+GR PG C+ L++ + MDD PEI R+ L +++L LK L
Sbjct: 526 EVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDR-MDDIPTPEILRSKLESIILSLKLL 584
Query: 501 GIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMI 558
IDD F I+ P G LT +G +A+ P+DP + KMI
Sbjct: 585 HIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMI 644
Query: 559 VASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNS 618
+ S C D I + AA LS S FY P K+ D + DH+ + +
Sbjct: 645 LMSALFCCLDPITSAAAALSF-KSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIA 703
Query: 619 WRECNYS---TQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLND--------- 666
+R+ YS +CY+N++ ++++ +++Q LL + +SN D
Sbjct: 704 YRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEK 763
Query: 667 LDAIKKAITSGFFPHSAKLQKN 688
+ ++ I +G +P+ A L+K+
Sbjct: 764 IPLLRAIIGAGLYPNMAHLRKS 785
Score = 417 (151.9 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 98/242 (40%), Positives = 144/242 (59%)
Query: 80 NDYEYVFEDKIDFIRDSVIDGEN--LDE-LHSELPDKSKEKSALEMLQEERKTLPIYPYR 136
N E+V E K R++ +D N LDE L EL + E++A + L E RK LP Y
Sbjct: 104 NFEEFVAETKE---RNADLDWVNPKLDERLQLELGQRQLEENAKKRL-EARKKLPTMKYA 159
Query: 137 DELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE----AGYTKQGKVGCTQPXXXXXXXXX 192
D+++QAV E QV++IVG TG GKTTQ+PQ L + G ++ CTQP
Sbjct: 160 DDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIA 219
Query: 193 XXXXQEMGVKLGHEVGYSIRFEDCTS-EKTILKYMTDGMLLREILSEPNLESYSVLMVDE 251
E LG+ VGY IR E + E+ + Y T G+LL+++ S+P + + SVL++DE
Sbjct: 220 EWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDE 279
Query: 252 AHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEI 311
HER++ TD+L GLLK ++ R DLK+++ SAT+ + F DYF + P+F+I G +PV++
Sbjct: 280 IHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKM 339
Query: 312 HY 313
Y
Sbjct: 340 LY 341
Score = 44 (20.5 bits), Expect = 1.6e-77, Sum P(3) = 1.6e-77
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 659 EVTSNLND--LDAIKKAITSGFFPHSAKLQKNGSYWT-VK--HP------QRVHIHPSS- 706
+ SN N + ++ I +G +P+ A L+K+ V+ H +RV+ HPSS
Sbjct: 754 DAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSV 813
Query: 707 --GLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLV 741
G + + VY + +T ++ T + P L+
Sbjct: 814 NSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALI 850
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 468 (169.8 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 130/416 (31%), Positives = 204/416 (49%)
Query: 320 DYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPI 377
D +D ++ L I + + G ILVFL G + I T ++L + K +I P+
Sbjct: 461 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKF---LIIPL 517
Query: 378 YANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGME 437
++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID G K ++ + +
Sbjct: 518 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 577
Query: 438 SLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLIL 497
++ +SKA+A QR GR+GR PG C+ LY +DD +PEI RT L + L +
Sbjct: 578 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQI 636
Query: 498 KSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLS 555
K L + + F +DPP ELT +G +A P++P +
Sbjct: 637 KILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIG 696
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRV 615
KMI+ C D ++TIAA LS + F P K+ AD R DH+ ++
Sbjct: 697 KMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKETRSDHLTVVNA 755
Query: 616 YNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL------ERVEIEVTSN 663
+ W E Y +C+E ++ +++ +++ Q E LL R + +N
Sbjct: 756 FEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKAN 815
Query: 664 LN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS-GLAQVLPRWV 716
+N D + I KA I +G +P AK++ N K + V +H S GL + P+ V
Sbjct: 816 INSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVHTKSDGLVSIHPKSV 867
Score = 387 (141.3 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 97/272 (35%), Positives = 150/272 (55%)
Query: 54 AEQEAWEEHQMGKASLKYGSKNKN--QSNDYEYVFEDKIDFIRDSVIDGENLDE-LHSEL 110
+E++ E ++ K ++ K + D Y+ D +++ +LD+ L +L
Sbjct: 123 SEKKINSEKKLDNQEKKLLNQEKKTFRITDKSYIDRDS-EYLLQENEPNLSLDQHLLEDL 181
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
K + +EM Q RK LP Y + EL+ +N +QV VI GETG GKTTQ+ Q++ +
Sbjct: 182 QRKKTDPRYIEM-QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD- 239
Query: 171 GYTKQGK-----VGCTQPXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSEK--T 221
Y ++GK + CTQP E G+ GY IR + K +
Sbjct: 240 NYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGS 299
Query: 222 ILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLIS 281
IL Y T G++L+ + S+ L S S +++DE HER L +D+L ++KDL+ FRSDLK+++
Sbjct: 300 IL-YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILM 358
Query: 282 SATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 359 SATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 389
Score = 77 (32.2 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWT-VK-HPQR---VHIHPSSGLAQVLP 713
+N+N D + I KA I +G +P AK++ N G VK H + V IHP S +
Sbjct: 814 ANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTD 873
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 874 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 904
Score = 40 (19.1 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 306 RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA 354
R PVE H K + + VL I + S D V G+E+I A
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADA 736
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 463 (168.0 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 127/442 (28%), Positives = 229/442 (51%)
Query: 320 DYIDAAIVTVLQIHVTQS--PGDILVFLTGQEEIET-ADEILKHRTRGLGSKIAELIICP 376
D I ++ + H+ + PG +LVFLTG ++I + +D+I H G +++ L++C
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVL-LLMC- 576
Query: 377 IYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGM 436
+ ++ T Q IFE P RK+VLATN+AE S+TI+ + +V+D G +K +Y+
Sbjct: 577 -HGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 437 ESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLI 496
LL IS+ASA QR GR+GR PG+C+ LY Y + +PE+ RT L ++ L
Sbjct: 636 PCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDA-FAEYQLPELLRTPLNSLCLQ 694
Query: 497 LKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
+KSL ++ + F + P LT +G+ ++ P+DP L
Sbjct: 695 IKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKL 754
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
KM++ +C D I+TI + LSV + F P+DK+ A +A++ F + DH+AL+R
Sbjct: 755 GKMLIMGAIFRCFDPILTIVSGLSVRDP-FLLPQDKKDLALSAKLRFSAKDYSDHMALVR 813
Query: 615 VYNSWRECNY---STQWCYENYIQVRSMKRARDIRDQLEGLLERV-----EIEVTSNLND 666
+ W++ + ++C+ N++ ++++ +R Q +L+ ++ + + L+
Sbjct: 814 AFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSH 873
Query: 667 LDAIKKA-ITSGFFPHSAKL---QKNGSYWTVKHPQRVHIHPSSGLAQ--VLPR-WVVYH 719
++ +A I SG FP A + + + S+ T+ Q V ++ +S ++ +P W+V+
Sbjct: 874 NQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQ-VSLYANSVNSRFPTIPYPWLVFG 932
Query: 720 ELVLTTKEYMRQVTELKPEWLV 741
E V +R T + L+
Sbjct: 933 EKVKVNAVLIRDSTGVPDSSLI 954
Score = 393 (143.4 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 90/238 (37%), Positives = 137/238 (57%)
Query: 87 EDKIDFIRDSVIDGENLDEL--HSELPDKSKEKSALEM-----LQEERKTLPIYPYRDEL 139
E+ D DS +DG ++++ + ++ +++ E + E RKTLP + ++ L
Sbjct: 210 EELPDENSDSFLDGSVMEKVLQRRSMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERL 269
Query: 140 LQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK-QG---KVGCTQPXXXXXXXXXXXX 195
LQA+ QV+V+ GETG GKTTQ+PQY+ E+ +G + CTQP
Sbjct: 270 LQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 329
Query: 196 XQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHER 255
E G LG VG+ +R E + T L + T G+LLR +LS+ NL + + VDE HER
Sbjct: 330 SAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHER 389
Query: 256 TLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
++ D L +LK+L+ R DL+L++ SATL+AE FS+Y+G AP IPG +PV+ H+
Sbjct: 390 GMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHF 447
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 468 (169.8 bits), Expect = 3.4e-77, Sum P(2) = 3.4e-77
Identities = 133/431 (30%), Positives = 209/431 (48%)
Query: 306 RYPVE-IHYTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
RY I + + D +D ++ L I + + G ILVFL G + I T ++L +
Sbjct: 445 RYSASTIDVLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 504
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
K +I P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID
Sbjct: 505 M---FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDG 561
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +DD +
Sbjct: 562 GKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQL 620
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTK 540
PEI RT L + L +K L + + F +DPP ELT
Sbjct: 621 PEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTP 680
Query: 541 VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMN 600
+G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD R
Sbjct: 681 LGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKE 739
Query: 601 FHLGNVGDHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL- 653
DH+ ++ + W E Y +C+E ++ +++ +++ Q E LL
Sbjct: 740 LAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG 799
Query: 654 -----ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
R + +N+N D + I KA I +G +P AK++ N K + V +H S
Sbjct: 800 AGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVHTKS 855
Query: 707 -GLAQVLPRWV 716
GL + P+ V
Sbjct: 856 DGLVSIHPKSV 866
Score = 384 (140.2 bits), Expect = 3.4e-77, Sum P(2) = 3.4e-77
Identities = 93/250 (37%), Positives = 139/250 (55%)
Query: 74 KNKNQSNDYEYVFEDKIDFIRDSVIDGENLDE-LHSELPDKSKEKSALEMLQEERKTLPI 132
K + D Y+ D +++ LD+ L +L K + +EM Q RK LP
Sbjct: 144 KKTYRITDKSYIDRDS-EYLLQQNEPNLGLDQQLLEDLQKKKTDPRYIEM-QRFRKKLPS 201
Query: 133 YPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG-----KVGCTQPXXXX 187
Y + EL+ +N +QV VI GETG GKTTQ+ Q++ + Y ++G ++ CTQP
Sbjct: 202 YGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGIGSACRIVCTQPRRIS 260
Query: 188 XXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLES 243
E G+ GY IR + K +IL Y T G++L+ + S+ L S
Sbjct: 261 AISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL-YCTTGIILQWLQSDSRLSS 319
Query: 244 YSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIP 303
S +++DE HER L +D+L ++KDL+ FRSDLK+++ SATL+AEKFS+YFG+ P+ IP
Sbjct: 320 VSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 379
Query: 304 GRRYPVEIHY 313
G +PV + Y
Sbjct: 380 GFTFPV-VEY 388
Score = 77 (32.2 bits), Expect = 4.2e-35, Sum P(2) = 4.2e-35
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWT-VK-HPQR---VHIHPSSGLAQVLP 713
+N+N D + I KA I +G +P AK++ N G VK H + V IHP S +
Sbjct: 813 ANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTD 872
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 873 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 903
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 175/508 (34%), Positives = 280/508 (55%)
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYIDAAI 326
+ LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI A +
Sbjct: 201 KEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 260
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIICPIYA 379
+ IH+ + GDILVFLTGQ EIE + E+L + + + L+I P Y
Sbjct: 261 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYG 320
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G++ L
Sbjct: 321 SMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDIL 380
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL LK
Sbjct: 381 EVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 440
Query: 500 LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIV 559
L I D++ F ++DPP G +T++G M EFPL P L+ ++
Sbjct: 441 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 500
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL----GNVGDHIALLRV 615
+ C D ++ IAAMLSV N +F RP D + + + + L G D L +
Sbjct: 501 KAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 616 YNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLNDLDAI 670
+ + WC +++I R + A + QL L+ +++ + T + +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 671 KKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVLTTKE 727
++ + +G+F + A+ ++ T+ VHIH + L + + W+++HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETKLEWIIFHEVLVTTKV 679
Query: 728 YMRQVTELKPEWLVEIAP--HYYQLKDV 753
Y R V ++ EW+ ++ P H + D+
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDL 707
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 123/276 (44%), Positives = 169/276 (61%)
Query: 99 DGENLDELHSELPDK-----SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE +L E P +EK T PI R +L+QAV + L++ G
Sbjct: 17 EGERSIDLQEERPSAVSIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQP +EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Query: 274 SD-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEIL 358
A + + IH+ + GDILVFLTGQ EIE + E+L
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 455 (165.2 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 125/408 (30%), Positives = 201/408 (49%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVT--QSPGDILVFLTGQEEIETADEIL 358
++ GR I + + D +D ++ L H+ + G ILVFL G + I T ++L
Sbjct: 430 QLRGRYSAGTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL 489
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ K II P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + +
Sbjct: 490 MSQVM---FKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF 546
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
VID G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +D
Sbjct: 547 VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LD 605
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXG 536
D +PEI RT L + L +K L + + F +DPP
Sbjct: 606 DYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQE 665
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
ELT +G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD
Sbjct: 666 ELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKVADA 724
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECN---YSTQ--WCYENYIQVRSMKRARDIRDQL-E 650
R DH+ ++ + W E + T+ +C+E ++ +++ +++ Q E
Sbjct: 725 RRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAE 784
Query: 651 GLL------ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKNGS 690
LL R + SN N D + + KA I +G +P AK++ + S
Sbjct: 785 HLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFS 832
Score = 364 (133.2 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 93/244 (38%), Positives = 139/244 (56%)
Query: 81 DYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRD--E 138
D EY+FE K D +D+ +D ++L +L K + +EM Q R+ LP Y R E
Sbjct: 145 DVEYLFE-KND--QDADLD----EQLKEDLRKKKSDPRYIEM-QRFREKLPSYGMRQKQE 196
Query: 139 LLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VGCTQPXXXXXXXXXX 193
L+ +N +V VI GETG GKTTQ+ Q++ + Y ++GK + CTQP
Sbjct: 197 LVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKGSTCRIVCTQPRRISAISVAE 255
Query: 194 XXXQEMGVKLGH--EVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMV 249
E G+ GY IR + K +IL Y T G++L+ + S+ +L S S +++
Sbjct: 256 RVAAERAEACGNGKSTGYQIRLQSRLPRKQGSIL-YCTTGIVLQWLQSDKHLSSISHVVL 314
Query: 250 DEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 309
DE HER L +D+L ++KDL+ R DLK+++ SATL+AEKFS+YF + P+ IPG +PV
Sbjct: 315 DEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV 374
Query: 310 EIHY 313
+ Y
Sbjct: 375 -VEY 377
Score = 74 (31.1 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWT------VKHPQRVHIHPSSGLAQVLP 713
SN N D + + KA I +G +P AK++ + S K V+IHP S +
Sbjct: 802 SNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETE 861
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W+VYH + T+ Y+ TE+ P L+
Sbjct: 862 FHYNWLVYHLKMRTSSIYLYDCTEVSPYCLL 892
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 709 (254.6 bits), Expect = 6.1e-77, Sum P(2) = 6.1e-77
Identities = 161/419 (38%), Positives = 243/419 (57%)
Query: 110 LPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE 169
+ DK ++ +L + + LPI ++ A++ QV++I GETGSGKTTQIP+ E
Sbjct: 80 IQDKQQKIRSLPKITYP-EGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLE 138
Query: 170 AGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDG 229
G G +G TQP +E+G KLG +VGY +RF D SE++ +K MTDG
Sbjct: 139 LGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDG 198
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
+LL E+ + L Y +++DEAHER+L+ D + G LK ++ R DLKL+I+SAT+D ++
Sbjct: 199 ILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQR 258
Query: 290 FSDYFGS-----APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVF 344
F+ +F S API ++ GR +PVE+ Y + ID + ++ + IL
Sbjct: 259 FAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISG---ILSA 315
Query: 345 LTGQEEIETADEIL-KHRTRGLGSKIAELI--------ICPIYANLPTELQAKIFEPTPE 395
+ + D ++ + R + A L+ + P+YA L Q +IF+P
Sbjct: 316 VDELSDCGNGDILVFLNGEREIRDTAAALVKANLRHTNVLPLYARLTVSEQNQIFKP--H 373
Query: 396 GARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGR 455
R +VLATN+AETSLT+ GIKYVIDPG +++ Y+ RT ++ L + P+S+ASA QR+GR
Sbjct: 374 SGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGR 433
Query: 456 SGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPP 514
GR G C RLY+ +Y K + T PEI RTNLA V+L + +L + D+ NF F++ P
Sbjct: 434 CGRVSEGICIRLYSEDDY-KSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAP 491
Score = 472 (171.2 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 127/367 (34%), Positives = 191/367 (52%)
Query: 318 EADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRTRGLGSKIAELIICP 376
E D I + V ++ + GDILVFL G+ EI +TA ++K R + P
Sbjct: 305 EVDIISGILSAVDELSDCGN-GDILVFLNGEREIRDTAAALVKANLRHTN-------VLP 356
Query: 377 IYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGM 436
+YA L Q +IF+P R +VLATN+AETSLT+ GIKYVIDPG +++ Y+ RT +
Sbjct: 357 LYARLTVSEQNQIFKP--HSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 414
Query: 437 ESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLI 496
+ L + P+S+ASA QR+GR GR G C RLY+ +Y K + T PEI RTNLA V+L
Sbjct: 415 QRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDY-KSRAEFTDPEILRTNLATVILQ 473
Query: 497 LKSLGIDDLVNFDFIDPPP---------------XXXXXXXXXXXXXXXXXXXXGELTKV 541
+ +L + D+ NF F++ P +LTK
Sbjct: 474 MHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKS 533
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
GR +A+FP+DP L+KM+V+S + C ++I+ I + LS+ + RP +KQ +D F
Sbjct: 534 GRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPR-ERPHEKQQLSDEKHNRF 592
Query: 602 HLGNVGDHIALLRVYNSWREC------NYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
D I+LL ++ E N + C ++ ++ +DI QL+ L+
Sbjct: 593 K-DKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKE 651
Query: 656 VEIEVTS 662
+I +TS
Sbjct: 652 QQITLTS 658
Score = 105 (42.0 bits), Expect = 6.1e-77, Sum P(2) = 6.1e-77
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 667 LDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTK 726
L + +A+ SG H + +N Y + + I P S L + P+W++ ELV T++
Sbjct: 690 LTPVHQALLSGLLSHIGQQDENREYKGARG-MKFFIFPGSALTKKSPKWLMSAELVETSR 748
Query: 727 EYMRQVTELKPEWLVEIAPH 746
+ R ++ P WL +A H
Sbjct: 749 LFARMNAKIDPLWLEPLAQH 768
Score = 46 (21.3 bits), Expect = 1.0e-70, Sum P(2) = 1.0e-70
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 627 QWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIK 671
Q ++ ++ + + DI L+G+L R+E ++ S+ N D +K
Sbjct: 1267 QLVFKGFVTYSGLSKLDDIIRYLQGMLRRLE-KLPSDPNQ-DRLK 1309
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 458 (166.3 bits), Expect = 9.6e-77, Sum P(4) = 9.6e-77
Identities = 115/363 (31%), Positives = 186/363 (51%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ + PG +L+FL G EI+ E L+ ++ P+++
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+P GMESL
Sbjct: 882 SLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESL 941
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL---I 496
+S+A+A+QR GR+GR G CF L++ H+Y+ + +PEIQR L + L I
Sbjct: 942 EDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKI 1001
Query: 497 LKSLGIDDL--VNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L+ L V I+PP +LT +G +A P+D +
Sbjct: 1002 LEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRI 1061
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ +++F +GN D++ALL+
Sbjct: 1062 GKLMLFGTIFRCLDPALTIAASLAF-KSPFVSPWDKREEANKKKLDFAVGN-SDYLALLQ 1119
Query: 615 VYNSWR----ECNYST-QWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDA 669
Y WR E + ++ +C EN++ R ++ ++ Q LL + V L D
Sbjct: 1120 AYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDIGF-VKEGLRARDI 1178
Query: 670 IKK 672
+K
Sbjct: 1179 ERK 1181
Score = 367 (134.2 bits), Expect = 9.6e-77, Sum P(4) = 9.6e-77
Identities = 79/200 (39%), Positives = 113/200 (56%)
Query: 115 KEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK 174
K + + ER+ LP + R+ +L + +QVLV+ G TG GKTTQIPQ++ +A
Sbjct: 522 KSSRRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQG 581
Query: 175 Q----GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
+ CTQP +E ++G VGY IR E S T L Y T G+
Sbjct: 582 SPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGV 641
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKF 290
LLR + + L+ + ++VDE HERT +D L +LKD++ R DL++++ SATL+AE F
Sbjct: 642 LLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELF 701
Query: 291 SDYFGSAPIFKIPGRRYPVE 310
S YF S PI IPGR +PV+
Sbjct: 702 SQYFHSCPIINIPGRTFPVD 721
Score = 61 (26.5 bits), Expect = 9.6e-77, Sum P(4) = 9.6e-77
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 692 WTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
+ K+ VHIHPSS Q ++VYHE + T++ ++R
Sbjct: 1248 FVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIR 1289
Score = 54 (24.1 bits), Expect = 9.6e-77, Sum P(4) = 9.6e-77
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 636 VRSMKRARDIRDQL----EGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQK-NGS 690
V+ RARDI + +G+L+ E SN + I + + +P+ +++K G
Sbjct: 1169 VKEGLRARDIERKWSQGGDGVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPEGK 1228
Query: 691 Y 691
Y
Sbjct: 1229 Y 1229
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 467 (169.5 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
Identities = 131/432 (30%), Positives = 210/432 (48%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVLQIHVT--QSPGDILVFLTGQEEIETADEILKHR 361
+RY + + + D +D ++ L H+ + G ILVFL G + I T ++L +
Sbjct: 566 KRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQ 625
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
K +I P+++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID
Sbjct: 626 VM---FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVID 682
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY +DD
Sbjct: 683 GGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQ 741
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELT 539
+PEI RT L + L +K L + + F +DPP ELT
Sbjct: 742 LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELT 801
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
+G +A P++P + KMI+ C D ++TIAA LS + F P K+ AD R
Sbjct: 802 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRK 860
Query: 600 NFHLGNVGDHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL 653
DH+ ++ + W E Y +C+E ++ +++ +++ Q E LL
Sbjct: 861 ELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 920
Query: 654 ------ERVEIEVTSNLN-DLDAIKKA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPS 705
R + SN+N D + I KA I +G +P AK++ N K + V ++
Sbjct: 921 GAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVYTK 976
Query: 706 S-GLAQVLPRWV 716
+ GL + P+ V
Sbjct: 977 TDGLVAIHPKSV 988
Score = 382 (139.5 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
Identities = 96/277 (34%), Positives = 152/277 (54%)
Query: 46 AGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDE 105
A +K N + E E+ + + + ++K D EY+ ++ D +D + L++
Sbjct: 245 AENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEP---DVALDQQLLED 301
Query: 106 LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ 165
L K + +EM Q R+ LP Y + EL+ ++ +QV VI GETG GKTTQ+ Q
Sbjct: 302 LRK----KKSDLRYIEM-QHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQ 356
Query: 166 YLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTS 218
++ + Y ++GK + CTQP E G+ GY IR +
Sbjct: 357 FILD-DYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLP 415
Query: 219 EK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL 276
K +IL Y T G++L+ + S+ +L S S +++DE HER L +D+L ++KDL+ FR DL
Sbjct: 416 RKQGSIL-YCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDL 474
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
K+++ SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 475 KVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 510
Score = 76 (31.8 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWTV-----KHPQRVHIHPSSGLAQVLP 713
SN+N D + I KA I +G +P AK++ N G + K V IHP S +
Sbjct: 935 SNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTE 994
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 995 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 1025
Score = 40 (19.1 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 108 SELPDKSKEKSALEMLQEERKTLP----IYPYRDELLQAVNEY 146
+E+P ++K S ++ +E+K + + RD+ + +EY
Sbjct: 241 TEIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEY 283
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 445 (161.7 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 109/349 (31%), Positives = 174/349 (49%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
D +++ + ++ + PG +LVFL G EI+ E L+ + ++ P+++
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L E Q +F G K++++TNIAETS+TID + YVID G K K Y+ MESL
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H + + +PEIQR L + L +K
Sbjct: 992 EDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKV 1051
Query: 500 LGID-----DLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + D V I+PP LT +G +A P+D +
Sbjct: 1052 LEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRI 1111
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F L N DH+AL++
Sbjct: 1112 GKLMLLGAIFRCLDPALTIAASLAF-KSPFVSPWDKREEANEKKLAFSLAN-SDHLALMQ 1169
Query: 615 VYNSWRECNYST-------QWCYENYIQVRSMKRARDIRDQLEGLLERV 656
Y W CN + Q+C EN++ +R ++ ++ Q LL +
Sbjct: 1170 AYKGW--CNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDI 1216
Score = 396 (144.5 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 92/224 (41%), Positives = 127/224 (56%)
Query: 93 IRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIV 152
IR + EN +L E K + + M QE+R+ LP + R+ +L+ + + QVLVI
Sbjct: 547 IRTEQMQEEN-KKLCREFKRKRSSRRYISM-QEQRQKLPAWQKREAILECLVKNQVLVIS 604
Query: 153 GETGSGKTTQIPQYLHEAGYTKQGK------VGCTQPXXXXXXXXXXXXXQEMGVKLGHE 206
G TG GKTTQIPQ++ + + + G+ + CTQP QE LGH
Sbjct: 605 GMTGCGKTTQIPQFILD-NFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHS 663
Query: 207 VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
GY IR E S T L + T G+LLR + +P L + ++VDE HERT +D L +L
Sbjct: 664 TGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVL 723
Query: 267 KDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 310
KDLI R+DLK+++ SATL+AE FS YF + P IPGR +PVE
Sbjct: 724 KDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVE 767
Score = 60 (26.2 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 700 VHIHPSS---GLAQVLPRWVVYHELVLTTKEYMR 730
VHIHPSS + ++VYHE V T++ ++R
Sbjct: 1306 VHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIR 1339
Score = 39 (18.8 bits), Expect = 2.8e-39, Sum P(3) = 2.8e-39
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 79 SNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSAL--EMLQEERKTL 130
S D + V ++ D + I EN E + L + +K+ + E +QEE K L
Sbjct: 508 SEDIDDVQDEGDDEDEEECIPVEN--ESYVNLRKRMVKKTEIRTEQMQEENKKL 559
Score = 37 (18.1 bits), Expect = 4.6e-39, Sum P(3) = 4.6e-39
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 286 DAEKFSDYFGSAPIFKIPGRR 306
D + FS FG + FK P R
Sbjct: 45 DGDDFSLDFGPSRSFKPPSSR 65
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 203/650 (31%), Positives = 331/650 (50%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQ--VLVIVGETGSGKTTQIPQYLHEAGYTK---QGK 177
L E+R+ LPI+ R L+ + V+++ G+ GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
V TQP EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYFG 295
++SVL++DEA ER++++D+L GLL+D L D ++++ + KF ++G
Sbjct: 155 TRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWG 214
Query: 296 SAPIFKIPGRRYP---VEIHYTKAPEADYIDAAIVTVLQI-HVTQSPGDILVFLTGQEEI 351
++PI ++P R P + Y D ++AA VL++ ++PGD+LV+L +EEI
Sbjct: 215 NSPIVRVP--REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEI 272
Query: 352 ETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
E L L + P++ +Q ++E T RK+V+ +A+ S
Sbjct: 273 SLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSF 331
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
++ I++VID G YNPR ES ++ PISK A R R+ PG C RLY+
Sbjct: 332 SLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKS 391
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXX 531
+ P++ NL+++VL+L I + F+D P
Sbjct: 392 TLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAA 451
Query: 532 XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
GEL+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ F RP
Sbjct: 452 LNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP--- 507
Query: 592 VHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ A A + L + GDH +L++VY ++ + WC + S+ +AR +R +L
Sbjct: 508 LSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELV 567
Query: 651 GLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHP 704
L++R+E+ ++ S N D ++KA+ SG+F A+ G+Y + H + P
Sbjct: 568 ELMQRIELPLSQPAFGSEQNRRD-LQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSP 626
Query: 705 SSGL------AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
AQ P WV+YH ++ + V+E++PE LVE+AP Y+
Sbjct: 627 YCSYRNRRTPAQP-PTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF 675
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 426 (155.0 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 87/198 (43%), Positives = 123/198 (62%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 208
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQP E + G +VGY IRFE S T + ++T G+LLR+I EP
Sbjct: 209 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREP 268
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YF +AP+
Sbjct: 269 SLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPV 328
Query: 300 FKIPGRRYPVEIHYTKAP 317
++PGR +P+ + + AP
Sbjct: 329 VQVPGRLFPITV-FDVAP 345
Score = 372 (136.0 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 82/198 (41%), Positives = 115/198 (58%)
Query: 389 IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKAS 448
+F+ P G RK +L+TNIAETS+TIDGI++V+D G K SY+P+ ++ L IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 449 AMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF 508
A QR GR+GRTGPG CFRLY +Y VPEI+R L ++VL +KS+ + D F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 509 DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSD 568
FI+PPP LT +G +A+ P+D ++ KM++ +
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 569 EIITIAAMLSVGNSIFYR 586
++TIAA LSV S F R
Sbjct: 519 PVLTIAAALSV-QSPFTR 535
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 743 (266.6 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 134/232 (57%), Positives = 183/232 (78%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ L ++ E+R++LPI+ +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 462 KKTQLSII-EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 520
Query: 176 GKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQP +E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 521 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 580
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 581 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 640
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PG+ +V + G
Sbjct: 641 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
Score = 41 (19.5 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 42 NLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSKNK 76
N+ G N E W++H G YG K +
Sbjct: 434 NMRGIGMMPNDIPE---WKKHAFGGNKASYGKKTQ 465
Score = 37 (18.1 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 72 GSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTL 130
GSK D + + ++ R + GE +E PD+ S + + E TL
Sbjct: 238 GSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTL 296
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 447 (162.4 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 96/237 (40%), Positives = 141/237 (59%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+Q R LPI ++++ +NE ++++ GETGSGKTTQ+PQ+L+EAGY + +G T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 183 PXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
P EM + EV Y IRFE + T +K+MTDG+LL+EI ++ L
Sbjct: 313 PRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLS 371
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFR----SDLKLLISSATLDAEKFSD---YFG 295
YSV+++DEAHER++ TDIL GLL ++ R LKL+I SATL F++ F
Sbjct: 372 KYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFK 431
Query: 296 -SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
P+ K+ R++PV IH+ K DY+ A L+IH G IL+F+TGQ+E+
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEV 488
Score = 345 (126.5 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 84/242 (34%), Positives = 130/242 (53%)
Query: 347 GQEEIETADEILKHRTRGLGSKIAE-LIICPIYANLPTELQAKIFEPTPEGARKVVLATN 405
G EE + DE+ G+GS + L + P+Y+ L +E Q +IF P P+G R V++TN
Sbjct: 592 GLEE-DNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTN 650
Query: 406 IAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCF 465
+AETSLTI IKYV+D G K + Y+ TG+ + +V SKASA QRAGR+GR G C+
Sbjct: 651 VAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCY 710
Query: 466 RLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXX--- 522
RLY+ Y+ +D + P+IQ+ + +++L ++ +GID +V+F F PP
Sbjct: 711 RLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERR 770
Query: 523 -----XXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAML 577
+T++G ++ FP+ P KM+ S + + + A L
Sbjct: 771 LIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830
Query: 578 SV 579
SV
Sbjct: 831 SV 832
Score = 96 (38.9 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 702 IHPSSGLAQVLPRWVVYHELVL-----TTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
+H SS L Q P WV+Y E +TK ++R +T ++PEWL+ P +++V +
Sbjct: 991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVPLLCNIREVRE 1049
Score = 75 (31.5 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 35/147 (23%), Positives = 63/147 (42%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYR--PKDKQVHAD 595
+T++G ++ FP+ P KM+ S + + + A LSV + +D+ V A
Sbjct: 791 VTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDV-AP 849
Query: 596 NARMNFHL--------GN---VGDHIALLRVYNSWRECNYS---TQWCYENYIQVRSMKR 641
A FH GN +GD + LLR + ++C N ++ ++M
Sbjct: 850 GAN-RFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSE 908
Query: 642 ARDIRDQLEGLLERVEIEVTSNLNDLD 668
R +R QL E+ N++D++
Sbjct: 909 VRKLRVQLTN-------EINLNVSDVE 928
Score = 39 (18.8 bits), Expect = 8.1e-32, Sum P(3) = 8.1e-32
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 89 KIDFIRDSVIDGENLD-ELHSELPDKSKEKSALE 121
KI+ + D + G++ + ++H E PD+ E+ LE
Sbjct: 563 KIN-LDDYKLPGDDTEADMH-EQPDEDDEQEGLE 594
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 207/649 (31%), Positives = 333/649 (51%)
Query: 123 LQEERKTLPIYPYRDELLQAV--NEYQVLVIVGETGSGKTTQIPQYLHE----AGYTKQG 176
L ++R+ LPI+ R L+ + N V+++ GE GSGK+TQIPQ+ E G+ K G
Sbjct: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQK-G 96
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
+V TQP EM + LGHEVGYSI EDCT T+L++ D +LL+E+
Sbjct: 97 QVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVA 156
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYF 294
S ++ VL++DEA ER++++D L GLL+D L K DL++++ + K ++
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFW 216
Query: 295 GSAPIFKIP---GRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
G+ PI IP G R P I++ P D ++AA VL++ + PGD+LVFL +EEI
Sbjct: 217 GNPPIVHIPREPGER-PSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEI 274
Query: 352 ETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
E L L + + P++ + +QA ++E ARKVV+ +A+ S
Sbjct: 275 SLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSF 331
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
++ I++VID G YNPR E ++ PISK A R R+ PG C LY
Sbjct: 332 SLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKS 391
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXX 531
+ P + NL+++VL+LK I + F+D P
Sbjct: 392 FLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAA 451
Query: 532 XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
G+L+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ F RP
Sbjct: 452 LDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP--- 507
Query: 592 VHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ A+ A + L + GDH +L++VY ++ + WC + ++ +A +R +L
Sbjct: 508 LSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELL 567
Query: 651 GLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHI-- 702
L++R+E+ ++ S N D ++KA+ SG+F A+ G+Y + H +
Sbjct: 568 ELMQRIELPLSLPAFGSEQNRRD-LQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSS 626
Query: 703 ---HPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+ S P WV+YH ++ + V+E++P+ LVE+AP Y+
Sbjct: 627 YCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 204/650 (31%), Positives = 335/650 (51%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQ--VLVIVGETGSGKTTQIPQYLHEAGYTK---QGK 177
L E+R+ LPI+ R L+ + V+++ GE GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
V TQP EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYFG 295
++SVL++DEA ER++++D+L GLL+D L D +++I + + KF ++G
Sbjct: 155 TRGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEPKFQAFWG 214
Query: 296 SAPIFKIPGRRYPVE---IHYTKAPEADYIDAAIVTVLQI-HVTQSPGDILVFLTGQEEI 351
++P +P R P E + Y AD ++AA VL++ ++PGD+LV+L +EEI
Sbjct: 215 NSPTVHVP--REPGENPTLTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEEI 272
Query: 352 ETADEILKHRTRGLGSKIAELI-ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETS 410
E L R G+ + L + P++ +Q ++E T RK+V+ +A+ S
Sbjct: 273 SLCCESLS-REMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADFS 330
Query: 411 LTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTL 470
++ I++VID G YNPR ES ++ ISK A R R+ PG C RLY+
Sbjct: 331 FSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYSK 390
Query: 471 HNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXX 530
+ P++ NL+++VL+LK I + F+D P
Sbjct: 391 STLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYLA 450
Query: 531 XXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDK 590
G+L+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ F RP
Sbjct: 451 ALDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP-- 507
Query: 591 QVHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQL 649
+ A A + L + GDH +L++VY ++ + WC + ++ +AR +R +L
Sbjct: 508 -LCAGEAALRRGLEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAEL 566
Query: 650 EGLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIH 703
L++R+E+ ++ S N D ++KA+ SG+F A+ G+Y + H +
Sbjct: 567 LELMQRIELPLSLPAFGSEQNRRD-LQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLS 625
Query: 704 P-----SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
P + P WV+YH ++ + V+E++PE LVE+AP Y+
Sbjct: 626 PYCVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYF 675
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 447 (162.4 bits), Expect = 4.1e-75, Sum P(4) = 4.1e-75
Identities = 114/364 (31%), Positives = 183/364 (50%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ + PG ILVFL G EI+ E L+ + + ++ P+++
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 885 SLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 944
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H+++ + +PEIQR L + L +K
Sbjct: 945 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKI 1004
Query: 500 LGIDDLVNFD-----FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + N I+PP +LT +G +A P+D +
Sbjct: 1005 LEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1064
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F N D++ALLR
Sbjct: 1065 GKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLR 1122
Query: 615 VYNSW----RE-CNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDA 669
Y W +E S +C +N++ R ++ ++ Q LL + V L +
Sbjct: 1123 AYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF-VKEGLRAREI 1181
Query: 670 IKKA 673
K+A
Sbjct: 1182 EKRA 1185
Score = 378 (138.1 bits), Expect = 4.1e-75, Sum P(4) = 4.1e-75
Identities = 78/194 (40%), Positives = 120/194 (61%)
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT----KQG 176
+ + +ER++LP + R+ +L+ ++E+QVLVI G TG GKTTQIPQ++ + + K
Sbjct: 531 QSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVA 590
Query: 177 KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
+ CTQP +E ++G VGY IR E S T L Y T G+LLR +
Sbjct: 591 NIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 650
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+ +L+ + ++VDE HERT +D L +LKD++ R +L++++ SATL+AE FS+YF S
Sbjct: 651 GDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSS 710
Query: 297 APIFKIPGRRYPVE 310
P+ IPGR +PV+
Sbjct: 711 CPVITIPGRTFPVD 724
Score = 65 (27.9 bits), Expect = 4.1e-75, Sum P(4) = 4.1e-75
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 692 WTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
+ K+ VHIHPSS QV ++VYHE + T++ ++R
Sbjct: 1250 FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
Score = 45 (20.9 bits), Expect = 5.0e-73, Sum P(4) = 5.0e-73
Identities = 15/74 (20%), Positives = 31/74 (41%)
Query: 636 VRSMKRARDIRDQLEG---LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYW 692
V+ RAR+I + +G +L+ E SN + I + + +P+ +++ +
Sbjct: 1172 VKEGLRAREIEKRAQGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKF 1231
Query: 693 TVKHPQRVHIHPSS 706
V + P S
Sbjct: 1232 QKTSTGAVRMQPKS 1245
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 411 LTIDGIKYVIDPGFSK----VKSYNPRTGMESLL-VHPISKASAMQRAGRSGRTGPGKCF 465
+TI G + +D F + V Y + G + + ++K R R+ +
Sbjct: 714 ITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQMTKEKLKARRSRTAFEEVEEDL 773
Query: 466 RLYTLHNYHKDMDDNTVPEIQ 486
RL +LH H+D + VP+ Q
Sbjct: 774 RL-SLHLQHQDSVKDAVPDQQ 793
Score = 37 (18.1 bits), Expect = 4.1e-75, Sum P(4) = 4.1e-75
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 103 LDELHSELPDKSKEKSALEMLQEE 126
L LH ++ K K+ L LQE+
Sbjct: 94 LQTLHMTSENQEKVKALLRDLQEQ 117
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 447 (162.4 bits), Expect = 8.6e-75, Sum P(4) = 8.6e-75
Identities = 111/347 (31%), Positives = 176/347 (50%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ + PG ILVFL G EI+ E L+ + + +I P+++
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H+Y+ + +PEIQR L + L +K
Sbjct: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1008
Query: 500 LGIDDLVNFD-----FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + N I+PP LT +G +A P+D +
Sbjct: 1009 LEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRI 1068
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F N D++ALL+
Sbjct: 1069 GKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLQ 1126
Query: 615 VYNSW----RE-CNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
Y W +E S +C +N++ R ++ ++ Q LL +
Sbjct: 1127 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Score = 375 (137.1 bits), Expect = 8.6e-75, Sum P(4) = 8.6e-75
Identities = 80/203 (39%), Positives = 119/203 (58%)
Query: 113 KSKEKSA-LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAG 171
+ K+ S + + +ER++LP + R+ +L + ++QV+VI G TG GKTTQIPQ++ +
Sbjct: 526 RMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDS 585
Query: 172 YT----KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
K + CTQP +E ++G VGY IR E S T L Y T
Sbjct: 586 LNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 645
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
G+LLR + + L+ S ++VDE HERT +D L +LKD++ R L++++ SATL+A
Sbjct: 646 TGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNA 705
Query: 288 EKFSDYFGSAPIFKIPGRRYPVE 310
E FSDYF S P+ IPGR +PV+
Sbjct: 706 ELFSDYFNSCPVITIPGRTFPVD 728
Score = 65 (27.9 bits), Expect = 8.6e-75, Sum P(4) = 8.6e-75
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 680 PHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
P SA+L+ + K+ VHIHPSS QV +++YHE + T++ ++R
Sbjct: 1247 PKSAELK-----FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
Score = 43 (20.2 bits), Expect = 1.7e-72, Sum P(4) = 1.7e-72
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 641 RARDIRDQLEG---LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHP 697
RAR+I + +G +L+ E SN + I + + +P+ +++ +
Sbjct: 1181 RAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTST 1240
Query: 698 QRVHIHPSS 706
V + P S
Sbjct: 1241 GAVRMQPKS 1249
Score = 37 (18.1 bits), Expect = 8.6e-75, Sum P(4) = 8.6e-75
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 103 LDELHSELPDKSKEKSALEMLQEE 126
L LH ++ K K+ L LQE+
Sbjct: 98 LQTLHMTSENQEKVKALLRDLQEQ 121
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 444 (161.4 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 114/350 (32%), Positives = 175/350 (50%)
Query: 338 PGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGA 397
PG ILVFL G EI+ E L+ + + +I P++++L +E Q +F P G
Sbjct: 842 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGV 901
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
K++++TNIAETS+TID + YVID G K K Y+ GMESL +S+A+A+QR GR+G
Sbjct: 902 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 961
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFD-----FID 512
R G CF L+T H+++ + +PEIQR L + L +K L + N I+
Sbjct: 962 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIE 1021
Query: 513 PPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIIT 572
PP LT +G +A P+D + K+++ +C D +T
Sbjct: 1022 PPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1081
Query: 573 IAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW----RE-CNYSTQ 627
IAA L+ S F P DK+ A+ ++ F N D++ALLR Y W +E S
Sbjct: 1082 IAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLRAYKGWQLSMKEGMRASYN 1139
Query: 628 WCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSG 677
+C +N++ R ++ ++ Q LL + V L + K+A G
Sbjct: 1140 YCRQNFLSGRVLQEMASLKRQFTELLSDIGF-VKEGLRAREIEKRAQGGG 1188
Score = 372 (136.0 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 81/217 (37%), Positives = 126/217 (58%)
Query: 98 IDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGS 157
+ EN+ ++ + K + +LQE R++LP + R+ +L+ ++++QVLV+ G TG
Sbjct: 507 VHAENV-KICKQFRIKQASRQFQSVLQE-RQSLPAWEERENILKLLSKHQVLVVSGMTGC 564
Query: 158 GKTTQIPQYLHEAGYT----KQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRF 213
GKTTQIPQ++ + K + CTQP +E ++G VGY IR
Sbjct: 565 GKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRL 624
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
E S T L Y T G+LLR + + L+ + ++VDE HERT +D L +LKD++ R
Sbjct: 625 ESVKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQR 684
Query: 274 SDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 310
L++++ SATL+AE FS+YF S P+ IPGR +PV+
Sbjct: 685 PTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVD 721
Score = 65 (27.9 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 692 WTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
+ K+ VHIHPSS QV ++VYHE + T++ ++R
Sbjct: 1250 FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
Score = 43 (20.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 636 VRSMKRARDIRDQLEG----LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSY 691
V+ RAR+I + +G +L+ E SN + I + + +P+ +++
Sbjct: 1171 VKEGLRAREIEKRAQGGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGK 1230
Query: 692 WTVKHPQRVHIHPSS 706
+ V + P S
Sbjct: 1231 FQKTSTGAVRMQPKS 1245
Score = 37 (18.1 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 103 LDELHSELPDKSKEKSALEMLQEE 126
L LH ++ K K+ L LQE+
Sbjct: 91 LQTLHMTSENQEKVKALLRDLQEQ 114
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 457 (165.9 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 130/444 (29%), Positives = 217/444 (48%)
Query: 320 DYIDAAIVTVLQIH--VTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPI 377
D ID + L H V ++ G ILVFL G + I T +++L + II P+
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRY-RFIIIPL 540
Query: 378 YANLPTELQAKI-------FEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSY 430
++ +PT Q ++ F+ P G RK+V+ATNIAETS+TID + YVID G K +
Sbjct: 541 HSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 600
Query: 431 NPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDN-TVPEIQRTN 489
+ + + ++ +S A+A QR GR+GR PGKC+ LY + + DN +PEIQRT
Sbjct: 601 DTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLY--NGLRASLLDNYQLPEIQRTP 658
Query: 490 LANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAE 547
L + L +K L + + F +DPP +LT +G +A
Sbjct: 659 LEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLAR 718
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVG 607
P++P + KMI+ C D ++TIAA LS + F+ P K+ AD R F +
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDP-FFIPLGKEKIADQRRKMFSQNSRS 777
Query: 608 DHIALLRVYNSWRECN-----YSTQWCYENYIQVRSMKRARDIRDQL-EGLLERVEI--- 658
DH++++ + W + + ++C++N++ +++ ++++ Q E LL +
Sbjct: 778 DHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSK 837
Query: 659 ---EVTSNLNDLDA--IKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS-GLAQVL 712
+ +SN+N + +K I +G +P AK+ + + K P V ++ + G +
Sbjct: 838 DPKDPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNK---KRPMPVKVYTKADGKVCIH 894
Query: 713 PRWVVYHELVLTTKEYMRQVTELK 736
P+ V E T +Y V LK
Sbjct: 895 PKSVNAEE---TQFQYKWLVYHLK 915
Score = 372 (136.0 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 98/268 (36%), Positives = 150/268 (55%)
Query: 49 KMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHS 108
K+ P E++ E+ +ASLK + N++N EY+ +D + +D +EL
Sbjct: 153 KVEPKDEKQ--EDAIKSRASLK---EELNETN-LEYLLQDVVQI---PFLD----EELKK 199
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
+ K + +EML+ RK LP Y R+EL++ ++ +VLVI GETG GKTTQ+ Q++
Sbjct: 200 DQQKKEDNAAYIEMLKF-RKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFIL 258
Query: 169 EAGYTK-QG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSEKT- 221
+ + QG +V CTQP E +G GY IR + K
Sbjct: 259 DDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQG 318
Query: 222 ILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLIS 281
L Y T G++L+ + S+P L S + L++DE HER++ +DIL ++KDL+ R DLK+++
Sbjct: 319 SLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLM 378
Query: 282 SATLDAEKFSDYFGSAPIFKIPGRRYPV 309
SATL+AEKFS YF + P+ IPG +PV
Sbjct: 379 SATLNAEKFSKYFNNCPMIHIPGYTFPV 406
Score = 78 (32.5 bits), Expect = 8.6e-34, Sum P(2) = 8.6e-34
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 661 TSNLNDLDA--IKKAITSGFFPHSAKLQKNGS--------YWTVKHPQRVHIHPSSGLA- 709
+SN+N + +K I +G +P AK+ + + +T K +V IHP S A
Sbjct: 843 SSNINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYT-KADGKVCIHPKSVNAE 901
Query: 710 --QVLPRWVVYHELVLTTKEYMRQVTELKP 737
Q +W+VYH + TT ++ TE+ P
Sbjct: 902 ETQFQYKWLVYHLKMKTTSIFLYDCTEVSP 931
Score = 44 (20.5 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 642 ARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGS 690
AR +RD+ IEV ++D D I +T+ H A + G+
Sbjct: 460 ARTLRDRFSD----TTIEVLGMMDDDDNIDLELTAALIRHIAVNENEGA 504
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 457 (165.9 bits), Expect = 3.2e-74, Sum P(2) = 3.2e-74
Identities = 122/405 (30%), Positives = 204/405 (50%)
Query: 297 APIFKIPGRRYPVEIHYTKAP--------------EADYIDAA-IVTVLQIHVTQSP--- 338
A + ++PGR +P+++ Y P + + ID A V VL + Q P
Sbjct: 312 ARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSE 371
Query: 339 -GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGA 397
GD+L+F++G EIE+ E + H ++ ++ P+++ Q+K+F+ PEG
Sbjct: 372 RGDVLIFVSGVNEIESVVEAV-HE---YATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
RK +++TNIAETSLT+DG+++V+D G K +++ + L +SK+SA QR GR+G
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX 517
RTGPG CFRLYT Y+ + PEI R L ++L + S+G+ D+ F FI+ P
Sbjct: 488 RTGPGVCFRLYTAEQYNA-FEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETE 546
Query: 518 XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAML 577
++T +GR +A P++ + KM++ ++++T+AAML
Sbjct: 547 RIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAML 606
Query: 578 SVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNY----STQWCYENY 633
SV N + R Q R + + GD L+R+YN W + + QWC
Sbjct: 607 SVQNPLTNRAHTDQ-RCVRERESLESDH-GDLFTLVRLYNVWVQLKMRRDGTRQWCRRLG 664
Query: 634 IQVRSMKRARDIRDQLEGLLERVEIEVTSNLND-LDAIKKAITSG 677
I+ + +R Q + +LE + V S+ + L + ++A G
Sbjct: 665 IEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERATRHG 709
Score = 371 (135.7 bits), Expect = 3.2e-74, Sum P(2) = 3.2e-74
Identities = 74/208 (35%), Positives = 123/208 (59%)
Query: 113 KSKEK-SALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAG 171
+ EK + L++ ++ LPI +R +L +A++ +V+++ G+TG GK+TQ+PQYL++ G
Sbjct: 128 RQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFG 187
Query: 172 YTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGML 231
Y + CTQP E+ G V + IRFE ++ T + ++T+G+L
Sbjct: 188 YRS---IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLL 244
Query: 232 LREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFS 291
LR++ NL+ Y L++DE HER L D L G+ K L++ R LKL++ SAT++ E F
Sbjct: 245 LRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFH 304
Query: 292 DYFGS--APIFKIPGRRYPVEIHYTKAP 317
YFG A + ++PGR +P+++ Y P
Sbjct: 305 GYFGEEGARLVQVPGRLFPIKLRYLPPP 332
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 464 (168.4 bits), Expect = 9.9e-74, Sum P(3) = 9.9e-74
Identities = 112/291 (38%), Positives = 171/291 (58%)
Query: 88 DKIDFIRDSVIDGENLDELHSELPDKS---KEKSALEM---LQEERKTLPIYPYRDELLQ 141
D+I R+ + +N D L LP + ++K +E +Q+ R LPI+ +++
Sbjct: 190 DQIVVKREDDEESDNEDIL--ALPTTTVINRKKVIVERSKEIQKSRAELPIFAEEMRIVE 247
Query: 142 AVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQPXXXXXXXXXXXXXQEMG 200
A+NE V V+ GETGSGKTTQIPQ+L+EAGY +G+ +G T+P Q +G
Sbjct: 248 AINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMA----QRVG 303
Query: 201 VKLGH--EVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLS 258
V+L EV Y IR+E SE T + +MTDG+L++E+ + L+ YSV+++DEAHER++
Sbjct: 304 VELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMY 363
Query: 259 TDILFGLLKDLIKFRSD----LKLLISSATLDAEKFSD--YFG--SAPIFKIPGRRYPVE 310
+D+L G+L ++ RS L+L+I SATL + F+ F + + K+ R++PV
Sbjct: 364 SDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVS 423
Query: 311 IHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
+H+ K DYI +A +IH T PG ILVF+TGQ E++ LK R
Sbjct: 424 VHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHEVKQLITKLKKR 474
Score = 319 (117.4 bits), Expect = 9.9e-74, Sum P(3) = 9.9e-74
Identities = 87/243 (35%), Positives = 120/243 (49%)
Query: 349 EEIETADEILKHRT--RGLGSKIA--ELIIC-PIYANLPTELQAKIFEPTPEGARKVVLA 403
EE E D L +G+ A E + C P+Y+ L Q ++F+ TP G R V++
Sbjct: 547 EEFENGDGDLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVIS 606
Query: 404 TNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGK 463
TN+AETSLTI G+KYVID GF K + Y+ TG+ V IS+AS QRAGR+GR G
Sbjct: 607 TNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGH 666
Query: 464 CFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXX 523
+RLY+ Y +D PEI +VL LKS+ I +VNF F P
Sbjct: 667 AYRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAE 725
Query: 524 -------XXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAM 576
+TK+G+ +A FPL P +K I +D+ I + ++
Sbjct: 726 KRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISL 785
Query: 577 LSV 579
LSV
Sbjct: 786 LSV 788
Score = 103 (41.3 bits), Expect = 4.0e-51, Sum P(3) = 4.0e-51
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF----YR---PKD- 589
+TK+G+ +A FPL P +K I +D+ I + ++LSV + R P++
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEET 806
Query: 590 ----KQVHADNARMNFHLG--NVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRAR 643
K V + R H G +GD L+ + + Y+ + C + ++V+++ AR
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 644 DIRDQLEGLL 653
+R QL ++
Sbjct: 867 KLRQQLTNIV 876
Score = 82 (33.9 bits), Expect = 9.9e-74, Sum P(3) = 9.9e-74
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 684 KLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV-LTTKEYMRQVTELKPEWLVE 742
++QK G+Y T V I P S + P +V+Y ELV + K+ M V + EWL
Sbjct: 927 EVQK-GAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSR 985
Query: 743 IAPHY 747
+A Y
Sbjct: 986 LAESY 990
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1 MTLDYDCCNNVKSLQYRIPDAYDEEGHVNQEKR 33
+ L N VK + + P A DE+ + EKR
Sbjct: 695 LVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKR 727
Score = 38 (18.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 65 GKASLKYGSKNKNQSNDYEYV-----FEDKIDFIRDSVIDGENLDELHSEL------PDK 113
G+ S G KN+N + + E + K+ ++ + +EL + L P K
Sbjct: 35 GEKSATGGKKNRNFAKEKEVAKLTKQAKRKLAAVQSRKALKQTQEELFAGLAEFQLDPSK 94
Query: 114 SKEKSALEMLQEERKTLPIYP 134
+ S+ L +E + P++P
Sbjct: 95 LCQLSSSTKLSKEPEKAPVFP 115
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 447 (162.4 bits), Expect = 1.4e-73, Sum P(5) = 1.4e-73
Identities = 114/364 (31%), Positives = 182/364 (50%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ + PG ILVFL G EI+ E L+ + + +I P+++
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 841 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 900
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H+Y+ + +PEIQR L + L +K
Sbjct: 901 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 960
Query: 500 LGIDDLVNFD-----FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + N I+PP +LT +G +A P+D +
Sbjct: 961 LEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1020
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F N D++ALL
Sbjct: 1021 GKLMLLGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLC 1078
Query: 615 VYNSWR-----ECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDA 669
Y W+ S +C +N++ R+++ ++ Q LL + V L +
Sbjct: 1079 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEI 1137
Query: 670 IKKA 673
K+A
Sbjct: 1138 EKRA 1141
Score = 355 (130.0 bits), Expect = 1.4e-73, Sum P(5) = 1.4e-73
Identities = 74/190 (38%), Positives = 112/190 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT----KQGKVGC 180
+ER+ LP + R+ +L+ ++++QV+VI G TG GKTTQIPQ++ + + + C
Sbjct: 490 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 549
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP +E ++G VGY IR E S T L Y T G+LLR + +
Sbjct: 550 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 609
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
L+ + ++VDE HERT +D L +LKD++ R+ L++++ SATLDA FS YF P+
Sbjct: 610 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 669
Query: 301 KIPGRRYPVE 310
IPGR +PV+
Sbjct: 670 TIPGRAFPVD 679
Score = 65 (27.9 bits), Expect = 1.4e-73, Sum P(5) = 1.4e-73
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 680 PHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
P SA+L+ + K+ VHIHPSS QV +++YHE + T++ ++R
Sbjct: 1199 PKSAELK-----FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1247
Score = 42 (19.8 bits), Expect = 1.4e-73, Sum P(5) = 1.4e-73
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 92 FIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYR 136
F+ + +++GE L EL + D+ + + + + E L YR
Sbjct: 413 FLSNQMLEGEGLSELEEDA-DEDEGPAPIVVENESYVNLKKRSYR 456
Score = 40 (19.1 bits), Expect = 1.4e-73, Sum P(5) = 1.4e-73
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 62 HQM-GKASLKYGSKNKNQSNDYEYVFEDKIDFIRD 95
HQ+ G+ + + ND +++E +I F +D
Sbjct: 278 HQIIGRTERNVNDPHLDAENDTTFLYELQIRFSKD 312
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 447 (162.4 bits), Expect = 2.0e-73, Sum P(5) = 2.0e-73
Identities = 114/364 (31%), Positives = 182/364 (50%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ + PG ILVFL G EI+ E L+ + + +I P+++
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 894 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 953
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H+Y+ + +PEIQR L + L +K
Sbjct: 954 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1013
Query: 500 LGIDDLVNFD-----FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + N I+PP +LT +G +A P+D +
Sbjct: 1014 LEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1073
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F N D++ALL
Sbjct: 1074 GKLMLLGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLC 1131
Query: 615 VYNSWR-----ECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDA 669
Y W+ S +C +N++ R+++ ++ Q LL + V L +
Sbjct: 1132 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEI 1190
Query: 670 IKKA 673
K+A
Sbjct: 1191 EKRA 1194
Score = 355 (130.0 bits), Expect = 2.0e-73, Sum P(5) = 2.0e-73
Identities = 74/190 (38%), Positives = 112/190 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT----KQGKVGC 180
+ER+ LP + R+ +L+ ++++QV+VI G TG GKTTQIPQ++ + + + C
Sbjct: 543 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 602
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP +E ++G VGY IR E S T L Y T G+LLR + +
Sbjct: 603 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 662
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
L+ + ++VDE HERT +D L +LKD++ R+ L++++ SATLDA FS YF P+
Sbjct: 663 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 722
Query: 301 KIPGRRYPVE 310
IPGR +PV+
Sbjct: 723 TIPGRAFPVD 732
Score = 65 (27.9 bits), Expect = 2.0e-73, Sum P(5) = 2.0e-73
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 680 PHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
P SA+L+ + K+ VHIHPSS QV +++YHE + T++ ++R
Sbjct: 1252 PKSAELK-----FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1300
Score = 42 (19.8 bits), Expect = 2.0e-73, Sum P(5) = 2.0e-73
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 92 FIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYR 136
F+ + +++GE L EL + D+ + + + + E L YR
Sbjct: 466 FLSNQMLEGEGLSELEEDA-DEDEGPAPIVVENESYVNLKKRSYR 509
Score = 40 (19.1 bits), Expect = 2.0e-73, Sum P(5) = 2.0e-73
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 62 HQM-GKASLKYGSKNKNQSNDYEYVFEDKIDFIRD 95
HQ+ G+ + + ND +++E +I F +D
Sbjct: 331 HQIIGRTERNVNDPHLDAENDTTFLYELQIRFSKD 365
Score = 37 (18.1 bits), Expect = 1.1e-72, Sum P(4) = 1.1e-72
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 103 LDELHSELPDKSKEKSALEMLQEE 126
L LH ++ K K+ L LQE+
Sbjct: 102 LQTLHMTSENQEKVKALLRDLQEQ 125
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 446 (162.1 bits), Expect = 2.1e-73, Sum P(5) = 2.1e-73
Identities = 113/364 (31%), Positives = 181/364 (49%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
+ I+A + ++ PG +LVFL G EI+ E L+ + + +I P+++
Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 890
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 891 SLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 950
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
+S+A+A+QR GR+GR G CF L+T H+Y+ + +PEIQR L + L +K
Sbjct: 951 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1010
Query: 500 LGIDDLVNFD-----FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 554
L + N I+PP +LT +G +A P+D +
Sbjct: 1011 LEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1070
Query: 555 SKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLR 614
K+++ +C D +TIAA L+ S F P DK+ A+ ++ F N D++ALL
Sbjct: 1071 GKLMLLGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLC 1128
Query: 615 VYNSWR-----ECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDA 669
Y W+ S +C +N++ R+++ ++ Q LL + V L +
Sbjct: 1129 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEI 1187
Query: 670 IKKA 673
K+A
Sbjct: 1188 EKRA 1191
Score = 355 (130.0 bits), Expect = 2.1e-73, Sum P(5) = 2.1e-73
Identities = 74/190 (38%), Positives = 112/190 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT----KQGKVGC 180
+ER+ LP + R+ +L+ ++++QV+VI G TG GKTTQIPQ++ + + + C
Sbjct: 540 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 599
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPN 240
TQP +E ++G VGY IR E S T L Y T G+LLR + +
Sbjct: 600 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 659
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIF 300
L+ + ++VDE HERT +D L +LKD++ R+ L++++ SATLDA FS YF P+
Sbjct: 660 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 719
Query: 301 KIPGRRYPVE 310
IPGR +PV+
Sbjct: 720 TIPGRAFPVD 729
Score = 65 (27.9 bits), Expect = 2.1e-73, Sum P(5) = 2.1e-73
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 680 PHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVL---PRWVVYHELVLTTKEYMR 730
P SA+L+ + K+ VHIHPSS QV +++YHE + T++ ++R
Sbjct: 1249 PKSAELK-----FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1297
Score = 43 (20.2 bits), Expect = 2.1e-73, Sum P(5) = 2.1e-73
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 62 HQM-GKASLKYGSKNKNQSNDYEYVFEDKIDFIRD 95
HQM G+A + + +D +++E +I F +D
Sbjct: 328 HQMIGRAERNVNDPHLDADDDTTFMYELQIRFSKD 362
Score = 40 (19.1 bits), Expect = 2.1e-73, Sum P(5) = 2.1e-73
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 92 FIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYR 136
F+ + +++GE L EL + D+ + +++ + E L Y+
Sbjct: 463 FLSNQMLEGERLSELEEDA-DEDEGPASIIVENESYVNLKKRSYK 506
Score = 37 (18.1 bits), Expect = 1.4e-72, Sum P(4) = 1.4e-72
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 103 LDELHSELPDKSKEKSALEMLQEE 126
L LH ++ K K+ L LQE+
Sbjct: 99 LQTLHMTSENQEKVKALLRDLQEQ 122
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 195/647 (30%), Positives = 325/647 (50%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQ--VLVIVGETGSGKTTQIPQYLHEAGYT---KQGK 177
L E+R+ LPI+ R L+ + V+++ GE GSGK+TQIPQ+ E K+G+
Sbjct: 38 LLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGR 97
Query: 178 VGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
V TQP EM + LG EVGYSI EDCT T+L++ D +LL+E+ S
Sbjct: 98 VTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYFG 295
++ VL++DEA ER++++D+L GLL++ L D ++++ + K ++G
Sbjct: 158 TRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQAFWG 217
Query: 296 SAPIFKIP-GR-RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIET 353
+ I +P G P ++ P D ++AA VL++ ++PGD+LV+L +EEI
Sbjct: 218 NPTIVHVPRGPGACPTPVYRDIVP-TDRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQ 276
Query: 354 ADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTI 413
E L L + + P++ +QA +E GARKVV+ +A+ S ++
Sbjct: 277 CCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLADFSFSL 335
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
I++VID G YNP+ ES ++ PIS+ A R R+ PG C LY
Sbjct: 336 PSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYPESFL 395
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX 533
+ P + NL+ +VL+LK I + F+D P
Sbjct: 396 ELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALD 455
Query: 534 XXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVH 593
G L+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ + P +
Sbjct: 456 DDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPP----LS 511
Query: 594 ADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
A+ A + L + GDH +L++VY ++ + WC + ++ +A+ +R +L L
Sbjct: 512 AEEAALRRALEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLEL 571
Query: 653 LERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHP-- 704
++++E+ ++ S N D ++KA+ SG+F A+ G+Y + H + P
Sbjct: 572 MQQIELPLSQPAFGSEQNRRD-LQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYC 630
Query: 705 ---SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
S P WV+YH ++ + V+E++P+ LVE+AP Y+
Sbjct: 631 CYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYF 677
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 394 (143.8 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 109/346 (31%), Positives = 170/346 (49%)
Query: 388 KIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKA 447
++F+ TP G RK+V+ATNIAETS+TID + YVID G K ++ + + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 448 SAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVN 507
+A QR GR+GR PG C+ LY +DD +PEI RT L + L +K L + +
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIAY 633
Query: 508 F--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDK 565
F +DPP ELT +G +A P++P + KMI+
Sbjct: 634 FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFC 693
Query: 566 CSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECN-- 623
C D ++TIAA LS + F P K+ AD R DH+ ++ + W E
Sbjct: 694 CLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRR 752
Query: 624 ---YSTQWCYENYIQVRSMKRARDIRDQL-EGLL------ERVEIEVTSNLN-DLDAIKK 672
Y +C+E ++ +++ +++ Q E LL R + SN+N D + I K
Sbjct: 753 GFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIK 812
Query: 673 A-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS-GLAQVLPRWV 716
A I +G +P AK++ N K + V ++ + GL + P+ V
Sbjct: 813 AVICAGLYPKVAKIRLNLG----KKRKMVKVYTKTDGLVAIHPKSV 854
Score = 382 (139.5 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 96/277 (34%), Positives = 152/277 (54%)
Query: 46 AGDKMNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDE 105
A +K N + E E+ + + + ++K D EY+ ++ D +D + L++
Sbjct: 125 AENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEP---DVALDQQLLED 181
Query: 106 LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ 165
L K + +EM Q R+ LP Y + EL+ ++ +QV VI GETG GKTTQ+ Q
Sbjct: 182 LRK----KKSDLRYIEM-QHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQ 236
Query: 166 YLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTS 218
++ + Y ++GK + CTQP E G+ GY IR +
Sbjct: 237 FILD-DYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLP 295
Query: 219 EK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL 276
K +IL Y T G++L+ + S+ +L S S +++DE HER L +D+L ++KDL+ FR DL
Sbjct: 296 RKQGSIL-YCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDL 354
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
K+++ SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 355 KVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 390
Score = 76 (31.8 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWTV-----KHPQRVHIHPSSGLAQVLP 713
SN+N D + I KA I +G +P AK++ N G + K V IHP S +
Sbjct: 801 SNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTE 860
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 861 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 891
Score = 61 (26.5 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVLQIHVT--QSPGDILVFLTGQEEIETADEIL 358
+RY + + + D +D ++ L H+ + G ILVFL G + I T ++L
Sbjct: 446 KRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL 502
Score = 42 (19.8 bits), Expect = 1.0e-34, Sum P(3) = 1.0e-34
Identities = 31/130 (23%), Positives = 53/130 (40%)
Query: 306 RYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGL 365
R PVE H K + + VL I + S D V G+E+I AD K +
Sbjct: 675 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI--ADARRKELAKD- 731
Query: 366 GSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG--IKYVIDPG 423
+K L + + E + + F + + L++N + + G ++++ G
Sbjct: 732 -TKSDHLTVVNAFEGWE-EARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAG 789
Query: 424 FSKVKSYNPR 433
F V S NP+
Sbjct: 790 F--VSSRNPK 797
Score = 40 (19.1 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 108 SELPDKSKEKSALEMLQEERKTLP----IYPYRDELLQAVNEY 146
+E+P ++K S ++ +E+K + + RD+ + +EY
Sbjct: 121 TEIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEY 163
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 407 (148.3 bits), Expect = 6.9e-70, Sum P(2) = 6.9e-70
Identities = 117/393 (29%), Positives = 191/393 (48%)
Query: 313 YTKAPEADYIDAAIVTVLQIHVT--QSPGDILVFLTGQEEI-ETADEILKHRTRGLGSKI 369
Y + +D +++ L + G ILVFL G ++I +T +L++ +K
Sbjct: 524 YMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKF 583
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
IIC +++ +P Q K+F P G RK+VLATNIAE+++TID + YVID G K KS
Sbjct: 584 D--IIC-LHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKS 640
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
Y+P + +L +SKA+A QR GR+GR PG C+ LY+ M D VPEI+R
Sbjct: 641 YDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRA-ASMPDFKVPEIKRMP 699
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
+ + L +K L + N DF+ DPP ELT++G +
Sbjct: 700 VEELCLQVKILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKF 758
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN--SIFYRPKDKQVHADNARMNFH- 602
P+ P++SKM+ + C D +T+A ++ P ++Q A A++
Sbjct: 759 GHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQ-KAAAAKLELAS 817
Query: 603 -LGNVGDHIALLRVYNSWRECN---YSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI 658
G DH+A++ + W+ S ++C + ++ +MK +R QLE L+R I
Sbjct: 818 LCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGI 877
Query: 659 ---EVTS---NLNDLDAIKKAITSGFFPHSAKL 685
+++S N D ++ + G +P +L
Sbjct: 878 IPNDISSCSQNSRDPGILRAVLAVGLYPMVGRL 910
Score = 387 (141.3 bits), Expect = 6.9e-70, Sum P(2) = 6.9e-70
Identities = 82/231 (35%), Positives = 129/231 (55%)
Query: 89 KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
K DF R I E + E + L + K+ AL+ + + R LPI ++D + AV QV
Sbjct: 146 KDDFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESNQV 205
Query: 149 LVIVGETGSGKTTQIPQYLHEAGYTKQG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGH 205
++I GETG GKTTQ+PQYL + ++ + K+ CTQP E G +G
Sbjct: 206 ILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGE 265
Query: 206 EVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL---MVDEAHERTLSTDIL 262
+GY +R + + + + T+G+LLR ++ + ++ S S + +VDE HER +D +
Sbjct: 266 NIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFM 325
Query: 263 FGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
+++DL+ L+L++ SATLDAE+FS YFG P+ ++PG YPV Y
Sbjct: 326 LAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 174/608 (28%), Positives = 305/608 (50%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVG 179
L +ER+ LP++ R ++++ +Q++++ G+ +GK++Q+PQ+ E A + G
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
C+Q EM V +GHEVGY + FE C + +TIL+Y TD ML RE++S P
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L SY V+++D+ HERT+ TD+L G+LK +++ R L+L+I +A + K D+ GS P+
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPL 244
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
++ + E+ YT + D+ +A+ + ++H T+ GDI++FL +++I+ A ++++
Sbjct: 245 IRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMIR 303
Query: 360 HRTRGLGSKIAELIICPIYANL------PTELQAKIFEPTPEGARKVVLATNIAETSLTI 413
+ ELI P+Y P + + K ++ + RKV+L T+ + + I
Sbjct: 304 QEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQ---KYRRKVLLTTSSGGSLIRI 360
Query: 414 DGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNY 473
I +VID G + K YNPR +S+ PISKA A + GK F LY
Sbjct: 361 KNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFT 420
Query: 474 HKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX-XXXXXXXXXXXXXXX 532
+K+M + +IQ +NL ++VL LK + I + +F+ P
Sbjct: 421 YKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGKTHQT 480
Query: 533 XXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
G ++ F + + + C E++ I +L N + P +
Sbjct: 481 RRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSGTEE 540
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRE--------CNYSTQWCYENYIQVRSMKRARD 644
A F GDH L+ V+N++RE C + +WC ++ +++ A
Sbjct: 541 IALTCWRKFS-HPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMAEM 599
Query: 645 IRDQLEGLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQ 698
IR +L +++R+E+ ++ S N L +IKKA+ SG+F A+ + +G+Y + H Q
Sbjct: 600 IRAELVEIMKRIELPISAPDFGSPENTL-SIKKALLSGYFMQIARDVDGSGNYLMLTHRQ 658
Query: 699 RVHIHPSS 706
+HP S
Sbjct: 659 VAKLHPFS 666
Score = 361 (132.1 bits), Expect = 7.8e-30, P = 7.8e-30
Identities = 101/368 (27%), Positives = 168/368 (45%)
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
RKV+L T+ + + I I +VID G + K YNPR +S+ PISKA A
Sbjct: 345 RKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILS 404
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPXX 517
+ GK F LY +K+M + +IQ +NL ++VL LK + I + +F+ P
Sbjct: 405 TSPSGKLFCLYPEEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCP 464
Query: 518 -XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAM 576
G ++ F + + + C E++ I +
Sbjct: 465 PSAKHGIRSTGKTHQTRRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVL 524
Query: 577 LSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRE--------CNYSTQW 628
L N + P + A F GDH L+ V+N++RE C + +W
Sbjct: 525 LHAPNCFLHTPSGTEEIALTCWRKFS-HPAGDHFTLINVFNAFREASTNSAGQCCSNEKW 583
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSA 683
C ++ +++ A IR +L +++R+E+ ++ S N L +IKKA+ SG+F A
Sbjct: 584 CRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTL-SIKKALLSGYFMQIA 642
Query: 684 K-LQKNGSYWTVKHPQRVHIHPSSGL--AQVLPRWVVYHELVLTTKEYMRQVTELKPEWL 740
+ + +G+Y + H Q +HP S + P WV++HE ++ +R V+E+ P
Sbjct: 643 RDVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLF 702
Query: 741 VEIAPHYY 748
VE+AP YY
Sbjct: 703 VELAPQYY 710
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 393 (143.4 bits), Expect = 2.9e-69, Sum P(2) = 2.9e-69
Identities = 110/347 (31%), Positives = 171/347 (49%)
Query: 387 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISK 446
+++F+ TP G RK+V+ATNIAETS+TID + YVID G K ++ + + ++ +SK
Sbjct: 520 SQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 579
Query: 447 ASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLV 506
A+A QR GR+GR PG C+ LY +DD +PEI RT L + L +K L + +
Sbjct: 580 ANAKQRKGRAGRVQPGHCYHLYNGLRASL-LDDYQLPEILRTPLEELCLQIKILRLGGIA 638
Query: 507 NF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKD 564
F +DPP ELT +G +A P++P + KMI+
Sbjct: 639 YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 698
Query: 565 KCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECN- 623
C D ++TIAA LS + F P K+ AD R DH+ ++ + W E
Sbjct: 699 CCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARR 757
Query: 624 ----YSTQWCYENYIQVRSMKRARDIRDQL-EGLL------ERVEIEVTSNLN-DLDAIK 671
Y +C+E ++ +++ +++ Q E LL R + SN+N D + I
Sbjct: 758 RGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKII 817
Query: 672 KA-ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS-GLAQVLPRWV 716
KA I +G +P AK++ N K + V ++ + GL V P+ V
Sbjct: 818 KAVICAGLYPKVAKIRLNLG----KKRKMVKVYTKTDGLVAVHPKSV 860
Score = 392 (143.0 bits), Expect = 2.9e-69, Sum P(2) = 2.9e-69
Identities = 102/288 (35%), Positives = 156/288 (54%)
Query: 84 YVFEDKIDFIRDSVIDGENLDE-LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQA 142
Y+ D ++++ DG LD+ L +L K + +EM Q R+ LP Y + EL+
Sbjct: 162 YIDRDSEYLLQENEPDG-TLDQKLLEDLQKKKNDLRYIEM-QHFREKLPSYGMQKELVNL 219
Query: 143 VNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VGCTQPXXXXXXXXXXXXXQ 197
++ +QV VI GETG GKTTQ+ Q++ + Y ++GK + CTQP
Sbjct: 220 IDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCTQPRRISAISVAERVAA 278
Query: 198 EMGVKLG--HEVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAH 253
E G + GY IR + K +IL Y T G++L+ + S+P L S S +++DE H
Sbjct: 279 ERAESCGSGNSTGYQIRLQSRLPRKQGSIL-YCTTGIILQWLQSDPYLSSVSHIVLDEIH 337
Query: 254 ERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
ER L +D+L ++KDL+ FRSDLK+++ SATL+AEKFS+YFG+ P+ IPG +PV + Y
Sbjct: 338 ERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 396
Query: 314 TKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
+ I V + H +Q + ++E E + I K R
Sbjct: 397 LLEDVIEKI--RYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKER 442
Score = 75 (31.5 bits), Expect = 8.2e-36, Sum P(2) = 8.2e-36
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 662 SNLN-DLDAIKKA-ITSGFFPHSAKLQKN-GSYWTV-----KHPQRVHIHPSSGLAQVLP 713
SN+N D + I KA I +G +P AK++ N G + K V +HP S +
Sbjct: 807 SNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTD 866
Query: 714 ---RWVVYHELVLTTKEYMRQVTELKPEWLV 741
W++YH + T+ Y+ TE+ P L+
Sbjct: 867 FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 897
Score = 63 (27.2 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 305 RRYPVE-IHYTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEIETADEIL 358
RRY + + E D +D ++ L I + + G ILVFL G + I T ++L
Sbjct: 452 RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLL 508
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 389 (142.0 bits), Expect = 1.7e-68, Sum P(3) = 1.7e-68
Identities = 94/258 (36%), Positives = 149/258 (57%)
Query: 73 SKNKNQ-SNDYEYVFEDKI---DFIRDSVIDGENLDELHS--ELPDKSKEKSALEMLQEE 126
S+NK + S D E +E+ + DF S ++ E ++L L K + + L +E
Sbjct: 507 SENKRENSEDPEESWENLVSDEDFSALS-LESEKAEDLEPVRNLFRKLQSTPKYQRLLKE 565
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL------HEAGYTKQGKVGC 180
R+ LP++ +R+ +++ + ++V+V+ GETGSGK+TQ+P +L +E G T + + C
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWG-TSKCNIVC 624
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDGMLLREI 235
TQP E+G + G GY IR E SE T L Y T G+LLR++
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
+ L + S ++VDE HER++ +D L +LK++++ RSDL L++ SAT+D+EKFS YF
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFT 744
Query: 296 SAPIFKIPGRRYPVEIHY 313
PI +I GR YPVE+ +
Sbjct: 745 HCPILRISGRSYPVEVFH 762
Score = 379 (138.5 bits), Expect = 1.7e-68, Sum P(3) = 1.7e-68
Identities = 110/373 (29%), Positives = 185/373 (49%)
Query: 322 IDAAIVTVLQIHVTQSP------GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIIC 375
I+ ++ L I++ +SP G +L+FL G I+ ++L R + +
Sbjct: 842 INLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VI 898
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
+++ L T+ QA F P G RK+VLATNIAET +TI + +VID G +K Y+ +
Sbjct: 899 ALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQ 958
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
M SL+ +SKASA+QR GR+GR G CFR+YT + MD +VPEI R L + L
Sbjct: 959 MSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCL 1017
Query: 496 -ILK-SLGI-DDLVNFDFIDPPPXXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLD 551
I+K +LG +D ++ +DPP LT +G+ +A P++
Sbjct: 1018 HIMKCNLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVN 1076
Query: 552 PMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIA 611
+ KM++ C D + T+AA+++ S F P ++ AD A+ + + DH+
Sbjct: 1077 VKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLT 1134
Query: 612 LLRVYNSWR----ECNYSTQ--WCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLN 665
+ Y W+ E Y ++ +C N++ S+ D++ +L L++ ++ N
Sbjct: 1135 IYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSN 1194
Query: 666 DLDAIKKAITSGF 678
D + + + T F
Sbjct: 1195 DWEENRASQTLPF 1207
Score = 62 (26.9 bits), Expect = 1.7e-68, Sum P(3) = 1.7e-68
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 699 RVHIHPSSGLAQVLPR-WVVYHELVLTTKEYMRQVTELKP 737
+ +HPSS + W++Y E V T+ Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1289
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 397 (144.8 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 93/266 (34%), Positives = 149/266 (56%)
Query: 61 EHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSV--IDGENLDELHSELPDKSKEKS 118
+ Q S K ++ + +E + D+ DF S+ D +NL+ + L K + S
Sbjct: 505 KQQQQLQSEKQTKVSEGPEDSWENLVSDE-DFNNLSLETADTDNLEPSRN-LFRKLQSSS 562
Query: 119 ALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG-- 176
+ +ER+ LP++ +R +++ + +++V+V+ GETGSGK+TQ+P +L E +G
Sbjct: 563 RYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTR 622
Query: 177 --KVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDG 229
+ CTQP +E+G + G GY IR E T E T L Y T G
Sbjct: 623 KCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTG 682
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
+LLR++ + L S S ++VDE HER++ +D L +LK+++ RSDL L++ SAT+D+EK
Sbjct: 683 VLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEK 742
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHYTK 315
FS YF PI +I GR YPVE+ + +
Sbjct: 743 FSSYFAHCPILRISGRSYPVEVFHVE 768
Score = 360 (131.8 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 108/363 (29%), Positives = 177/363 (48%)
Query: 322 IDAAIVTVLQIHVTQSP------GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIIC 375
I+ ++ L ++ +SP G +L+FL G I+ +++ R LI
Sbjct: 846 INLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIA- 904
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
+++ L T+ QA F P G RK+VLATNIAET +TI + +VID G +K Y+ +
Sbjct: 905 -LHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQ 963
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
M SL +SKASA+QR GR+GR G CFR+YT + M+ +VPEI R L + L
Sbjct: 964 MSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCL 1022
Query: 496 -ILK-SLGI-DDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 551
I+K +LG +D ++ +DPP P +LT +G+ +A P++
Sbjct: 1023 HIMKCNLGSPEDFLS-RALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVN 1081
Query: 552 PMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIA 611
+ KM++ C D + T+AA+++ S F P ++ AD A+ + L V DH+
Sbjct: 1082 VKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSSIALA-VSDHLT 1139
Query: 612 LLRVYNSWRECNYS------TQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLN 665
+ Y W++ +C N++ S+ D++ +L L+ + +
Sbjct: 1140 IYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQH 1199
Query: 666 DLD 668
LD
Sbjct: 1200 RLD 1202
Score = 71 (30.1 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSY-------WTVKHPQ-RVHIHPSSGLAQV-LP 713
+L+++ +K +T+G + + K+ S V+ Q + +HPSS + +
Sbjct: 1211 SLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSVNRDLQVH 1270
Query: 714 RWVVYHELVLTTKEYMRQVTELKP 737
W++Y E V K Y+R+ T + P
Sbjct: 1271 GWLLYQEKVRYAKVYLRETTLISP 1294
Score = 45 (20.9 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 53 FAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYV-FEDKIDFIRDSV-IDGENLDELHSEL 110
+AEQ++ EE S+K + K N+ YV K+ ++ I ++ D+ ++
Sbjct: 241 YAEQQSDEEKN---ESVKETDEEKFDPNE-RYVHLAAKLSEAKEQASISKQDKDKQGQKV 296
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQ 147
++EK + +Q+E L +P D ++ N+ Q
Sbjct: 297 ---AQEK--IRRIQQEMAMLEEHPVFDPAIKTSNQQQ 328
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 391 (142.7 bits), Expect = 3.3e-68, Sum P(3) = 3.3e-68
Identities = 96/258 (37%), Positives = 148/258 (57%)
Query: 73 SKNKNQ-SNDYEYVFEDKI---DFIRDSVIDGENLDELHS--ELPDKSKEKSALEMLQEE 126
S+NK + S D E +E+ + DF S ++ E +++L L K + + L +E
Sbjct: 507 SENKRENSEDPEESWENLVSDEDFSALS-LESEKVEDLEPVRNLFRKLQSTPKYQRLLKE 565
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL------HEAGYTKQGKVGC 180
R+ LP++ +R +++ + ++V+V+ GETGSGK+TQ+P +L +E G TK V C
Sbjct: 566 RQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIV-C 624
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDGMLLREI 235
TQP E+G + G GY IR E SE T L Y T G+LLR++
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
+ L + S ++VDE HER++ +D L +LK++++ RSDL L++ SAT+D EKFS YF
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFT 744
Query: 296 SAPIFKIPGRRYPVEIHY 313
PI +I GR YPVE+ +
Sbjct: 745 HCPILRISGRSYPVEVFH 762
Score = 375 (137.1 bits), Expect = 3.3e-68, Sum P(3) = 3.3e-68
Identities = 104/350 (29%), Positives = 175/350 (50%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L R + + +++ L T+ QA F P+G R
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 921
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 922 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 982 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1039
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
+LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1040 LQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1099
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1100 AVMTE-KSPFITPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKARQEGGYRSEIAY 1157
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGF 678
C +N++ S+ D++ +L L++ ++ N + + T F
Sbjct: 1158 CRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNRATQTLSF 1207
Score = 61 (26.5 bits), Expect = 3.3e-68, Sum P(3) = 3.3e-68
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 661 TSNLNDLDAIKKAITSGFFPHSAKLQKNGSY-------WTVKHPQ-RVHIHPSSGLAQV- 711
T + ++ +K +T+G + + K+ S V+ Q + +HPSS +
Sbjct: 1204 TLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSVNRDLQ 1263
Query: 712 LPRWVVYHELVLTTKEYMRQVTELKP 737
+ W++Y E + + Y+R+ T + P
Sbjct: 1264 IYGWLLYQEKIRYARVYLRETTLITP 1289
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 414 (150.8 bits), Expect = 3.4e-68, Sum P(2) = 3.4e-68
Identities = 121/387 (31%), Positives = 193/387 (49%)
Query: 313 YTKAPEADYIDAAIVTVL--QIHVTQSPGDILVFLTGQEEI-ETADEILKHRTRGLGSKI 369
Y + + +D ++ L +I G ILVFL G EEI +T +++L R +K
Sbjct: 548 YMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKF 607
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
+I+C +++ +P E Q K+F P G RK+VLATNIAE+++TID + YVID G K KS
Sbjct: 608 --IILC-LHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKS 664
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
Y+P + +L +SKA+A QRAGR+GR G C+ LY+ + + VPE+ R
Sbjct: 665 YDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRA-ASLPEYRVPEVMRMP 723
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
+ + L +K L + VN DF+ DPP ELT++G++
Sbjct: 724 VDELCLQVKMLDPNCNVN-DFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKF 782
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN--SIFYRPKD-KQVHADNARMNFH 602
+ P+ P +SKMI + C D + +A + ++ P D K+ A +
Sbjct: 783 GQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASL 842
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQ---WCYENYIQVRSMKRARDIRDQLEGLLERVEIE 659
G+ DH+A + + W+ S Q +C + +I MKR D+ +L+G L R +
Sbjct: 843 YGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVI 902
Query: 660 VTSNLN-DLDA-----IKKAITSGFFP 680
+S+ N L+A ++ I G +P
Sbjct: 903 PSSSSNCSLNAHDPGILRAVIAVGLYP 929
Score = 366 (133.9 bits), Expect = 3.4e-68, Sum P(2) = 3.4e-68
Identities = 79/231 (34%), Positives = 127/231 (54%)
Query: 89 KIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQV 148
K DF + + +++ L + K++ + E R LPI +RD ++ AV QV
Sbjct: 176 KDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQV 235
Query: 149 LVIVGETGSGKTTQIPQYL--HEAGYTKQG-KVGCTQPXXXXXXXXXXXXXQEMGVKLGH 205
++I GETG GKTTQ+PQYL H K+ K+ CTQP E G +G
Sbjct: 236 VLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGR 295
Query: 206 EVGYSIRFEDCTSEKTILKYMTDGMLLREILSE---PNLESYSVLMVDEAHERTLSTDIL 262
VGY +R + ++ + + T+G+LLR ++ + ++ + ++VDE HER +D +
Sbjct: 296 TVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFM 355
Query: 263 FGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
+L+DL+ L+L++ SATLDAE+FS+YFG P+ ++PG YPV +
Sbjct: 356 LMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFF 406
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 389 (142.0 bits), Expect = 5.7e-68, Sum P(3) = 5.7e-68
Identities = 94/258 (36%), Positives = 149/258 (57%)
Query: 73 SKNKNQ-SNDYEYVFEDKI---DFIRDSVIDGENLDELHS--ELPDKSKEKSALEMLQEE 126
S+NK + S D E +E+ + DF S ++ E ++L L K + + L +E
Sbjct: 507 SENKRENSEDPEESWENLVSDEDFSALS-LESEKAEDLEPVRNLFRKLQSTPKYQRLLKE 565
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL------HEAGYTKQGKVGC 180
R+ LP++ +R+ +++ + ++V+V+ GETGSGK+TQ+P +L +E G T + + C
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWG-TSKCNIVC 624
Query: 181 TQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDGMLLREI 235
TQP E+G + G GY IR E SE T L Y T G+LLR++
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
+ L + S ++VDE HER++ +D L +LK++++ RSDL L++ SAT+D+EKFS YF
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFT 744
Query: 296 SAPIFKIPGRRYPVEIHY 313
PI +I GR YPVE+ +
Sbjct: 745 HCPILRISGRSYPVEVFH 762
Score = 374 (136.7 bits), Expect = 5.7e-68, Sum P(3) = 5.7e-68
Identities = 105/350 (30%), Positives = 174/350 (49%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L R + + +++ L T+ QA F P G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1042
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1043 LQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1103 AVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKARQEGGYRSEIAY 1160
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGF 678
C N++ S+ D++ +L L++ ++ ND + + + T F
Sbjct: 1161 CRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPF 1210
Score = 62 (26.9 bits), Expect = 5.7e-68, Sum P(3) = 5.7e-68
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 699 RVHIHPSSGLAQVLPR-WVVYHELVLTTKEYMRQVTELKP 737
+ +HPSS + W++Y E V T+ Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1292
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 391 (142.7 bits), Expect = 2.9e-67, Sum P(3) = 2.9e-67
Identities = 93/270 (34%), Positives = 151/270 (55%)
Query: 55 EQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKS 114
+Q+ ++ Q S K GS++ +S + V ++ + + E+L + S L +
Sbjct: 498 KQQQQQQQQQRPESEKGGSEDPEESWE-NLVSDEDLAALSLEPTSAEDLAPVRS-LFRRL 555
Query: 115 KEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL------H 168
+ + L +ER+ LP++ +RD +++ + ++V+V+ GETGSGK+TQ+P +L
Sbjct: 556 QSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLD 615
Query: 169 EAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTIL 223
E G K V CTQP +E+G + G GY IR E SE T L
Sbjct: 616 ECGARKCNIV-CTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRL 674
Query: 224 KYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSA 283
Y T G+LLR++ + L S ++VDE HER++ +D L +LK++++ RSDL L++ SA
Sbjct: 675 LYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSA 734
Query: 284 TLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
T+D++KFS YF PI +I GR YPVE+ +
Sbjct: 735 TVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
Score = 363 (132.8 bits), Expect = 2.9e-67, Sum P(3) = 2.9e-67
Identities = 110/401 (27%), Positives = 196/401 (48%)
Query: 275 DLKLLISSATLDAEKFSDYF----GSAPIFKIPGRRYPVEI-HYTKAPEADYIDAAIVTV 329
++ + ++S +K+ +Y G++P ++Y H I+ ++
Sbjct: 792 EITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILE 851
Query: 330 LQIHVTQSP------GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPT 383
L +++ +SP G +L+FL G I+ ++L R + + +++ L T
Sbjct: 852 LLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQ---VIALHSVLST 908
Query: 384 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHP 443
+ QA F P G RK+VLATNIAET +TI + +VID G +K Y+ + M SL+
Sbjct: 909 QDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 968
Query: 444 ISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLG 501
+SKASA+QR GR+GR G CFRLYT + +D +VPEI R L + L I+K LG
Sbjct: 969 VSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMKCDLG 1027
Query: 502 I-DDLVNFDFIDPPPXXXXXXXXXXXXXXXXXX-XXGELTKVGRRMAEFPLDPMLSKMIV 559
+D ++ +DPP +LT +G+ +A P++ + KM++
Sbjct: 1028 SPEDFLS-KALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLI 1086
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
C + + T+AA+++ S F P ++ AD A+ + + + DH+ + Y W
Sbjct: 1087 FGAIFGCLEPVATLAAVMTE-KSPFITPIGRKDEADLAKSSLAVAD-SDHLTIYNAYLGW 1144
Query: 620 R----ECNYSTQ--WCYENYIQVRSMKRARDIRDQLEGLLE 654
+ E + ++ +C N++ S+ D++ +L L++
Sbjct: 1145 KKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVK 1185
Score = 64 (27.6 bits), Expect = 2.9e-67, Sum P(3) = 2.9e-67
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 661 TSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPR------ 714
T + D+ +K + +G + K+ S V + + G AQV P
Sbjct: 1203 TLSFQDIALLKAVLAAGLYDSVGKIMCTKSV-DVTEKLACMVETAQGKAQVHPSSVNRDL 1261
Query: 715 ----WVVYHELVLTTKEYMRQVTELKP 737
W++Y E V T+ Y+R+ T + P
Sbjct: 1262 QTYGWLLYQEKVRYTRVYLRETTLITP 1288
Score = 48 (22.0 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKC 464
+K V GFS S+ R G ++L I+ A+ AG G C
Sbjct: 1181 MKLVKAAGFSSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMC 1229
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 413 (150.4 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 110/334 (32%), Positives = 177/334 (52%)
Query: 320 DYIDAAIVTVLQIHV--TQSPGDILVFLTGQEEIETADEIL--KHRTRGLGSKIAELIIC 375
D ID ++ L H+ T G IL+FL G EI ++L +R RG A+ ++
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRG---PAADWLL- 950
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
P+++++ + Q K+F P+G RKV+ ATNIAETS+TID + YVID G K YNP+
Sbjct: 951 PLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKK 1010
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
+ S++ IS+A+A QR GR+GR PG CF LYT + + K M VPE+ R L + L
Sbjct: 1011 LSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCL 1070
Query: 496 ILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
+K LG+ + F ++PP ELT +G +A+ P+D +
Sbjct: 1071 QIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVL 1130
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
+ KM++ C I++IAA LS + Y PKD++ + D ++ L + G ++
Sbjct: 1131 IGKMLLYGGIFGCLSPILSIAAFLSYKSPFIY-PKDEKQNVDRVKLAL-LSDNG--VSSS 1186
Query: 614 RVYNSWRECNYSTQW-CYENYIQV---RSMKRAR 643
+ N+ R+ ++ Y+ ++++ R MK A+
Sbjct: 1187 DLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQ 1220
Score = 341 (125.1 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 87/234 (37%), Positives = 129/234 (55%)
Query: 94 RDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
RDS I+ E L L + +K + + +ML+ R LPI ++ +LQ + E VLV+ G
Sbjct: 580 RDSYIEAECLS-LQRKQENKKRTQKYKDMLKT-RTALPISEVKNGILQHLKEKDVLVVCG 637
Query: 154 ETGSGKTTQIPQYLHE----AGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKL-GHE-- 206
ETGSGKTTQ+PQ++ + +G+ + CTQP E G +
Sbjct: 638 ETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDS 697
Query: 207 -VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGL 265
VGY +R E S+KT L + T G+LLR++ + L + ++VDE HER+L D L +
Sbjct: 698 LVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLII 757
Query: 266 LKDLIKFRS-D-----LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
LK LI+ +S D LK+++ SAT+DA+ FS YFG P+ GR +PV H+
Sbjct: 758 LKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHF 811
Score = 62 (26.9 bits), Expect = 3.6e-67, Sum P(3) = 3.6e-67
Identities = 25/78 (32%), Positives = 34/78 (43%)
Query: 666 DLDAIKKAITSGFFPHSAKL---QKNGSYWTVKHPQRVHIHPSS---GLAQVLPRWVVYH 719
++ A K IT F K K+ S W + VHIHPSS ++V+
Sbjct: 1301 NIAANDKGITETTFNSLTKQGNQTKSYSAW-YDGRREVHIHPSSINSNFKAFQNPFLVFL 1359
Query: 720 ELVLTTKEYMRQVTELKP 737
E V T K Y+R T + P
Sbjct: 1360 EKVETNKVYLRDTTIVSP 1377
Score = 55 (24.4 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 594 ADNARMNFHLGN---VGDHIALLRVYNSW------RECNYSTQWCYENYIQVRSMKRARD 644
+DN + L N DH+ ++ Y+ W R + ++C ++ M+ RD
Sbjct: 1179 SDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRD 1238
Query: 645 IRDQLEGLL 653
+R Q LL
Sbjct: 1239 MRVQFGTLL 1247
Score = 43 (20.2 bits), Expect = 4.7e-36, Sum P(3) = 4.7e-36
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 71 YGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEML 123
Y S N N +D + + + + ID E L+EL + D +E + L L
Sbjct: 873 YVSSNYNSYSDQT---QQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFL 922
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 392 (143.0 bits), Expect = 7.5e-67, Sum P(3) = 7.5e-67
Identities = 95/277 (34%), Positives = 157/277 (56%)
Query: 50 MNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHS- 108
+N +Q+ ++ Q + K S++ +S +E + D+ DF S ++ E ++L
Sbjct: 493 LNKLKQQQ--QQQQQHSENKKENSEDPEES--WENLVSDE-DFSALS-LESEKAEDLEPV 546
Query: 109 -ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL 167
L K + + L +ER+ LP++ +R+ +++ + ++V+V+ GETGSGK+TQ+P +L
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFL 606
Query: 168 ------HEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDC 216
+E G T + + CTQP E+G + G GY IR E
Sbjct: 607 LEDLLLNEWG-TSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESR 665
Query: 217 TSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL 276
SE T L Y T G+LLR++ + L + S ++VDE HER++ +D L +LK++++ RSDL
Sbjct: 666 ASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL 725
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
L++ SAT+D+EKFS YF PI +I GR YPVE+ +
Sbjct: 726 HLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 363 (132.8 bits), Expect = 7.5e-67, Sum P(3) = 7.5e-67
Identities = 101/328 (30%), Positives = 167/328 (50%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L R + + +++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1042
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
+LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1043 LQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1103 AVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAY 1160
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERV 656
C N++ S+ +I+ + LL+ +
Sbjct: 1161 CRRNFLNRTSLLTLEEIKRRRTTLLKLI 1188
Score = 59 (25.8 bits), Expect = 7.5e-67, Sum P(3) = 7.5e-67
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 661 TSNLNDLDAIKKAITSGFFPHSAKLQKNGSY-------WTVKHPQ-RVHIHPSSGLAQVL 712
T + ++ +K +T+G + + K+ S V+ Q + +HPSS +
Sbjct: 1204 TLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQ 1263
Query: 713 PR-WVVYHELVLTTKEYMRQVTELKP 737
W++Y E + + Y+R+ T + P
Sbjct: 1264 TYGWLLYQEKIRYARVYLRETTLITP 1289
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 385 (140.6 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 92/257 (35%), Positives = 146/257 (56%)
Query: 73 SKNKNQ-SNDYEYVFEDKI---DFIRDSVIDGENLDELHS--ELPDKSKEKSALEMLQEE 126
S+NK + S D E +E+ + DF S ++ N+++L L K + + L +E
Sbjct: 510 SENKRENSEDPEESWENLVSDEDFSALS-LESANVEDLEPVRNLFRKLQSTPKYQKLLKE 568
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG-----CT 181
R+ LP++ +RD +++ + ++V+V+ GETGSGK+TQ+P +L E + + CT
Sbjct: 569 RQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCT 628
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
QP E+G + G GY IR E E T L Y T G+LLR++
Sbjct: 629 QPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQ 688
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+ L + S ++VDE HER++ +D L +LK++++ RSDL L++ SAT+D+EKFS YF
Sbjct: 689 EDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTH 748
Query: 297 APIFKIPGRRYPVEIHY 313
PI +I GR YPVE+ +
Sbjct: 749 CPILRISGRSYPVEVFH 765
Score = 368 (134.6 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 101/326 (30%), Positives = 167/326 (51%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L + R + + +++ L T+ QA F P G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1042
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
+LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1043 LQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1103 AVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKARQEGGYRSEITY 1160
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLE 654
C N++ S+ D++ +L L++
Sbjct: 1161 CRRNFLNRTSLLTLEDVKQELIKLVK 1186
Score = 58 (25.5 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 699 RVHIHPSSGLAQVLPR-WVVYHELVLTTKEYMRQVTELKP 737
+ +HPSS + W++Y E + + Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTHGWLLYQEKIRYARVYLRETTLITP 1292
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 392 (143.0 bits), Expect = 2.0e-66, Sum P(3) = 2.0e-66
Identities = 95/277 (34%), Positives = 157/277 (56%)
Query: 50 MNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHS- 108
+N +Q+ ++ Q + K S++ +S +E + D+ DF S ++ E ++L
Sbjct: 493 LNKLKQQQ--QQQQQHSENKKENSEDPEES--WENLVSDE-DFSALS-LESEKAEDLEPV 546
Query: 109 -ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL 167
L K + + L +ER+ LP++ +R+ +++ + ++V+V+ GETGSGK+TQ+P +L
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFL 606
Query: 168 ------HEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDC 216
+E G T + + CTQP E+G + G GY IR E
Sbjct: 607 LEDLLLNEWG-TSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESR 665
Query: 217 TSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL 276
SE T L Y T G+LLR++ + L + S ++VDE HER++ +D L +LK++++ RSDL
Sbjct: 666 ASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL 725
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
L++ SAT+D+EKFS YF PI +I GR YPVE+ +
Sbjct: 726 HLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 359 (131.4 bits), Expect = 2.0e-66, Sum P(3) = 2.0e-66
Identities = 99/318 (31%), Positives = 162/318 (50%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L R + + +++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1042
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
+LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1043 LQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1103 AVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAY 1160
Query: 629 CYENYIQVRSMKRARDIR 646
C N++ S+ +I+
Sbjct: 1161 CRRNFLNRTSLLTLEEIK 1178
Score = 59 (25.8 bits), Expect = 2.0e-66, Sum P(3) = 2.0e-66
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 661 TSNLNDLDAIKKAITSGFFPHSAKLQKNGSY-------WTVKHPQ-RVHIHPSSGLAQVL 712
T + ++ +K +T+G + + K+ S V+ Q + +HPSS +
Sbjct: 1207 TLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQ 1266
Query: 713 PR-WVVYHELVLTTKEYMRQVTELKP 737
W++Y E + + Y+R+ T + P
Sbjct: 1267 TYGWLLYQEKIRYARVYLRETTLITP 1292
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 408 (148.7 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 111/353 (31%), Positives = 177/353 (50%)
Query: 313 YTKAPEADYIDAAIVTVLQIHVTQS--PGDILVFLTGQEEIE-TADEILKHRTRGLGSKI 369
Y + + + +D ++ L ++ S G IL+FL G +EI D IL R
Sbjct: 610 YHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKR-FADNT 668
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
+ +++N+ T Q K+ + P G RK++L+TNIAETS+T++ + +VID G K KS
Sbjct: 669 HRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKS 728
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
++ + L + ISKASA+QR GR+GR PG CFRL++ + ++ T PE+ R
Sbjct: 729 FDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMP 787
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L + L K L + DF+ +PPP +LT++G +
Sbjct: 788 LQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHL 847
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLG 604
A+ P++P L KM++ + KC D I+TIA L+ + + Q A R F G
Sbjct: 848 ADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAG 907
Query: 605 NVGDHIALLRVYNSWRECNYSTQW----CYENYIQVRSMKRARDIRDQLEGLL 653
DH+ALLR + +W++ S W C +N++ +M+ +R QL G L
Sbjct: 908 TFSDHMALLRAFQAWQKAR-SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 959
Score = 354 (129.7 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 77/209 (36%), Positives = 124/209 (59%)
Query: 106 LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ 165
L++ +P ++ E R++LP++ ++E+++ + E +V++IVGETGSGKTTQIPQ
Sbjct: 185 LNNGIPQVPVKRGESEF-DSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQ 243
Query: 166 YLHEAGYTKQG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTI 222
+L + + K G ++ CTQP E ++G +GY IR E S KT+
Sbjct: 244 FLLDDCF-KNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTL 302
Query: 223 LKYMTDGMLLREILS-EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLIS 281
L + T+G+LLR +++ + L + + ++VDE HER +D L L+DL++ LKL++S
Sbjct: 303 LTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILS 362
Query: 282 SATLDAEKFSDYFGSAPIFKIPGRRYPVE 310
SA LD F YFGS P+ I GR + V+
Sbjct: 363 SAALDVNLFIRYFGSCPVIYIQGRPFEVK 391
Score = 200 (75.5 bits), Expect = 4.2e-44, Sum P(2) = 4.2e-44
Identities = 57/214 (26%), Positives = 98/214 (45%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
+PPP +LT++G +A+ P++P L KM++ + KC D I+
Sbjct: 814 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 873
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 874 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWER 932
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLE-----RV----EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L R +I +V +N + +K A+ +
Sbjct: 933 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVA 992
Query: 677 GFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
G +P+ + + T ++V HP+S L+Q
Sbjct: 993 GMYPNLVHVDRENVILTGPKEKKVRFHPTSVLSQ 1026
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 408 (148.7 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 111/353 (31%), Positives = 177/353 (50%)
Query: 313 YTKAPEADYIDAAIVTVLQIHVTQS--PGDILVFLTGQEEIE-TADEILKHRTRGLGSKI 369
Y + + + +D ++ L ++ S G IL+FL G +EI D IL R
Sbjct: 594 YHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKR-FAENA 652
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
+ +++N+ T Q K+ + P G RK++L+TNIAETS+T++ + +VID G K KS
Sbjct: 653 HRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKS 712
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
++ + L + ISKASA+QR GR+GR PG CFRL++ + ++ T PE+ R
Sbjct: 713 FDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMP 771
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L + L K L + DF+ +PPP +LT++G +
Sbjct: 772 LQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHL 831
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLG 604
A+ P++P L KM++ + KC D I+TIA L+ + + Q A R F G
Sbjct: 832 ADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAG 891
Query: 605 NVGDHIALLRVYNSWRECNYSTQW----CYENYIQVRSMKRARDIRDQLEGLL 653
DH+ALLR + +W++ S W C +N++ +M+ +R QL G L
Sbjct: 892 TFSDHMALLRAFQAWQKAR-SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 943
Score = 353 (129.3 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 74/188 (39%), Positives = 116/188 (61%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG---KVGCTQP 183
R++LP++ ++E+++ + E +V++IVGETGSGKTTQIPQ+L + + K G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 184 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS-EPNLE 242
E ++G +GY IR E S KT+L + T+G+LLR +++ + L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
+ + ++VDE HER +D L L+DL++ LKL++SSA LD F YFGS P+ I
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 367
Query: 303 PGRRYPVE 310
GR + V+
Sbjct: 368 QGRPFEVK 375
Score = 202 (76.2 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 57/214 (26%), Positives = 97/214 (45%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
+PPP +LT++G +A+ P++P L KM++ + KC D I+
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 857
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 858 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWER 916
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLE-----RV----EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L R +I +V +N + +K A+ +
Sbjct: 917 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVA 976
Query: 677 GFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
G +PH + + ++V HP+S L+Q
Sbjct: 977 GMYPHLVHVDRENVVLAGPKEKKVRFHPTSVLSQ 1010
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 402 (146.6 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 107/325 (32%), Positives = 165/325 (50%)
Query: 339 GDILVFLTGQEEIE-TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGA 397
G IL+FL G +EI D IL R + +++N+ T Q K+ + P G
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKR-FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGV 680
Query: 398 RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSG 457
RK++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA+QR GR+G
Sbjct: 681 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAG 740
Query: 458 RTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFI----DP 513
R PG CFRL++ + ++ T PE+ R L + L K L + DF+ +P
Sbjct: 741 RCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEP 799
Query: 514 PPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITI 573
PP +LT++G +A+ P++P L KM++ + KC D I+TI
Sbjct: 800 PPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTI 859
Query: 574 AAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW---- 628
A L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 860 ACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAF 918
Query: 629 CYENYIQVRSMKRARDIRDQLEGLL 653
C +N++ +M+ +R QL G L
Sbjct: 919 CEKNFLSQATMEIIIGMRTQLLGQL 943
Score = 353 (129.3 bits), Expect = 3.6e-66, Sum P(2) = 3.6e-66
Identities = 74/188 (39%), Positives = 116/188 (61%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG---KVGCTQP 183
R++LP++ ++E+++ + E +V++IVGETGSGKTTQIPQ+L + + K G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 184 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS-EPNLE 242
E ++G +GY IR E S KT+L + T+G+LLR +++ + L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
+ + ++VDE HER +D L L+DL++ LKL++SSA LD F YFGS P+ I
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 367
Query: 303 PGRRYPVE 310
GR + V+
Sbjct: 368 QGRPFEVK 375
Score = 172 (65.6 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 50/185 (27%), Positives = 85/185 (45%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
+PPP +LT++G +A+ P++P L KM++ + KC D I+
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 857
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 858 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWER 916
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLE-----RV----EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L R +I +V +N + +K A+ +
Sbjct: 917 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVA 976
Query: 677 GFFPH 681
G +P+
Sbjct: 977 GMYPN 981
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 392 (143.0 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 95/277 (34%), Positives = 157/277 (56%)
Query: 50 MNPFAEQEAWEEHQMGKASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHS- 108
+N +Q+ ++ Q + K S++ +S +E + D+ DF S ++ E ++L
Sbjct: 493 LNKLKQQQ--QQQQQHSENKKENSEDPEES--WENLVSDE-DFSALS-LESEKAEDLEPV 546
Query: 109 -ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL 167
L K + + L +ER+ LP++ +R+ +++ + ++V+V+ GETGSGK+TQ+P +L
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFL 606
Query: 168 ------HEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDC 216
+E G T + + CTQP E+G + G GY IR E
Sbjct: 607 LEDLLLNEWG-TSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESR 665
Query: 217 TSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDL 276
SE T L Y T G+LLR++ + L + S ++VDE HER++ +D L +LK++++ RSDL
Sbjct: 666 ASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL 725
Query: 277 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
L++ SAT+D+EKFS YF PI +I GR YPVE+ +
Sbjct: 726 HLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 355 (130.0 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 98/311 (31%), Positives = 159/311 (51%)
Query: 339 GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGAR 398
G +L+FL G I+ ++L R + + +++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 399 KVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGR 458
K+VLATNIAET +TI + +VID G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 459 TGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL-ILK-SLGI-DDLVNFDFIDPPP 515
G CFR+YT + MD +VPEI R L + L I+K +LG +D ++ +DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMD-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-KALDPPQ 1042
Query: 516 XXXXXXXXXXXXXXXX-XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIA 574
+LT +G+ +A P++ + KM++ C D + T+A
Sbjct: 1043 LQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1102
Query: 575 AMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWR----ECNYSTQ--W 628
A+++ S F P ++ AD A+ + + DH+ + Y W+ E Y ++ +
Sbjct: 1103 AVMTE-KSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAY 1160
Query: 629 CYENYIQVRSM 639
C N++ S+
Sbjct: 1161 CRRNFLNRTSL 1171
Score = 59 (25.8 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 661 TSNLNDLDAIKKAITSGFFPHSAKLQKNGSY-------WTVKHPQ-RVHIHPSSGLAQVL 712
T + ++ +K +T+G + + K+ S V+ Q + +HPSS +
Sbjct: 1207 TLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQ 1266
Query: 713 PR-WVVYHELVLTTKEYMRQVTELKP 737
W++Y E + + Y+R+ T + P
Sbjct: 1267 TYGWLLYQEKIRYARVYLRETTLITP 1292
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 400 (145.9 bits), Expect = 9.8e-66, Sum P(3) = 9.8e-66
Identities = 108/353 (30%), Positives = 177/353 (50%)
Query: 313 YTKAPEADYIDAAIVTVLQIHVTQSP--GDILVFLTGQEEI-ETADEILKHRTRGLGSKI 369
Y + + + +D ++ L ++ S G IL+FL G +EI D I+ R + +
Sbjct: 505 YHHSFDDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAH 564
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
++ + +++N+ T Q + + P G RK++L+TNIAETS+T++ + +VID G K KS
Sbjct: 565 SKYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKS 624
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
++ + + L ISKASA+QR GR+GR PG CF L++ + ++ T PE++R
Sbjct: 625 FDALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQT-PELRRMP 683
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L + L K L + DF+ DPPP +LT++G +
Sbjct: 684 LQELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHL 743
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLG 604
AE P++P L KM++ + KC D I+TIA L+ + Q A R G
Sbjct: 744 AELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAG 803
Query: 605 NVGDHIALLRVYNSWRECNYSTQW----CYENYIQVRSMKRARDIRDQLEGLL 653
DH+ LLR + +W++ S W C +N++ +M+ +R QL G L
Sbjct: 804 TFSDHMVLLRAFQAWQKAR-SDGWERVFCEKNFLSQATMEIIIGMRTQLLGQL 855
Score = 365 (133.5 bits), Expect = 9.8e-66, Sum P(3) = 9.8e-66
Identities = 81/215 (37%), Positives = 129/215 (60%)
Query: 100 GENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGK 159
G+ L S +P ++ E R++LP++ ++E+++ + E +V++IVGETGSGK
Sbjct: 74 GKTSGRLSSGIPQVPLKRGESEY-DSFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGK 132
Query: 160 TTQIPQYLHEAGYTKQG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 216
TTQIPQ+L + Y + G ++ CTQP E K+G VGY IR E
Sbjct: 133 TTQIPQFLLDDCY-ENGVPCRIFCTQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESR 191
Query: 217 TSEKTILKYMTDGMLLREILS-EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD 275
S +T+L + T+G+LLR +++ + L + + ++VDE HER +D L L+D+++ +++
Sbjct: 192 VSPRTLLTFCTNGILLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTN 251
Query: 276 LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 310
LKL+ISSA LDA F YFGS P+ I GR + V+
Sbjct: 252 LKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVK 286
Score = 191 (72.3 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
DPPP +LT++G +AE P++P L KM++ + KC D I+
Sbjct: 710 DPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPIL 769
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + Q A R G DH+ LLR + +W++ S W
Sbjct: 770 TIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKAR-SDGWER 828
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLERV---------EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L + +I +V N + +K A+ +
Sbjct: 829 VFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSENWAVVKAALVA 888
Query: 677 GFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
G +P+ + + T ++V HP+S L+Q
Sbjct: 889 GMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQ 922
Score = 37 (18.1 bits), Expect = 9.8e-66, Sum P(3) = 9.8e-66
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 625 STQWCYENYIQVRSMKRARDIRDQLEGLLE 654
S W + I +R++ +Q GLL+
Sbjct: 1053 SKPWSQADEITIRAIISVLSTEEQFAGLLQ 1082
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 403 (146.9 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 111/353 (31%), Positives = 178/353 (50%)
Query: 313 YTKAPEADYIDAAIVTVLQIHVTQS--PGDILVFLTGQEEIE-TADEILKHRTRGLGSKI 369
Y + + + +D ++ L ++ S G +L+FL G +EI D IL R S
Sbjct: 595 YHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTH 654
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
+ +++N+ T Q K+ + P G RK++L+TNIAETS+T++ + +VID G K KS
Sbjct: 655 RYQVFM-LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKS 713
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
++ + L + ISKASA+QR GR+GR PG CFRL++ + ++ T PE+ R
Sbjct: 714 FDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMP 772
Query: 490 LANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L + L K L + DF+ +PPP +LT++G +
Sbjct: 773 LQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHL 832
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLG 604
A+ P++P L KM++ + KC D I+TIA L+ + + Q A R F G
Sbjct: 833 ADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAG 892
Query: 605 NVGDHIALLRVYNSWRECNYSTQW----CYENYIQVRSMKRARDIRDQLEGLL 653
DH+ALLR + +W++ S W C +N++ +M+ +R QL G L
Sbjct: 893 AFSDHMALLRAFQAWQKAR-SDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 944
Score = 353 (129.3 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 74/188 (39%), Positives = 116/188 (61%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG---KVGCTQP 183
R++LP++ ++E+++ + E +V++IVGETGSGKTTQIPQ+L + + K G ++ CTQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 184 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS-EPNLE 242
E ++G +GY IR E S KT+L + T+G+LLR +++ + L
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
+ + ++VDE HER +D L L+DL++ LKL++SSA LD F YFGS P+ I
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 368
Query: 303 PGRRYPVE 310
GR + V+
Sbjct: 369 QGRPFEVK 376
Score = 198 (74.8 bits), Expect = 8.5e-44, Sum P(2) = 8.5e-44
Identities = 57/214 (26%), Positives = 98/214 (45%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
+PPP +LT++G +A+ P++P L KM++ + KC D I+
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 858
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 859 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKAR-SDGWER 917
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLE-----RV----EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L R +I +V +N + +K A+ +
Sbjct: 918 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVA 977
Query: 677 GFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
G +P+ + + T ++V HP+S L+Q
Sbjct: 978 GMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQ 1011
Score = 39 (18.8 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 380 NLPTELQAKIFEPTPEGARKVVLA---TNIAETSLTIDGIKYVIDPGFSKVKS 429
NL Q I+ TP RK+ A ++I ++ G + GFS++ S
Sbjct: 1300 NLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHF--QGFSRMSS 1350
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 376 (137.4 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 120/456 (26%), Positives = 203/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 714
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +
Sbjct: 715 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVH 771
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 772 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MA 830
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 831 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 889
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 890 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 947
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R + W E + + ENY++ ++ A +R + GL+
Sbjct: 948 DKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLI 1005
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1006 KQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1064
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1065 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1100
Score = 369 (135.0 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 574 PSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 633
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 634 VIKVPGFMYPVKEHY 648
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 376 (137.4 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 120/456 (26%), Positives = 203/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 716
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +
Sbjct: 717 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVH 773
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 774 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 832
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 833 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 891
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 892 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 949
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R + W E + + ENY++ ++ A +R + GL+
Sbjct: 950 DKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLI 1007
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1008 KQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1066
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1067 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1102
Score = 369 (135.0 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 370 (135.3 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 105/348 (30%), Positives = 180/348 (51%)
Query: 322 IDAAIVTVLQIHVTQSP------GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIIC 375
I+ ++ L +++ +SP G +L+FL G I+ ++L + R + +LI
Sbjct: 845 INLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERY-QLIA- 902
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
+++ L T+ QA F P G RK+VLATNIAET +TI + +VID G +K Y+ +
Sbjct: 903 -LHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQ 961
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
M SL+ +SKASA+QR GR+GR G CFRLYT + ++ +VPEI R L + L
Sbjct: 962 MSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLE-YSVPEILRVPLEELCL 1020
Query: 496 -ILK-SLGI-DDLVNFDFIDPP-PXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 551
I+K LG +D ++ +DPP P +LT +G+ +A P++
Sbjct: 1021 HIMKCDLGSPEDFLS-KALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVN 1079
Query: 552 PMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIA 611
+ KM++ C + + T+AA+++ S F P ++ AD A+ + + + DH+
Sbjct: 1080 VKIGKMLIFGAIFGCLEPVATLAAVMTE-KSPFITPIGRKDEADLAKSSLAVAD-SDHLT 1137
Query: 612 LLRVYNSWR----ECNYSTQ--WCYENYIQVRSMKRARDIRDQLEGLL 653
+ Y W+ E + ++ +C N++ S+ D++ +L L+
Sbjct: 1138 IYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV 1185
Score = 367 (134.2 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 79/204 (38%), Positives = 123/204 (60%)
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL------HEAGYTK 174
+ L +ER+ LP++ +R +++ + ++V+V+ GETGSGK+TQ+P +L ++ G K
Sbjct: 563 QRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARK 622
Query: 175 QGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSEKTILKYMTDG 229
V CTQP +E+G + G GY IR E SE T L Y T G
Sbjct: 623 CNIV-CTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTG 681
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
+LLR++ + L S ++VDE HER++ +D L +LK++++ RSDL L++ SAT+D++K
Sbjct: 682 VLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDK 741
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHY 313
FS YF PI +I GR YPVE+ +
Sbjct: 742 FSTYFTHCPILRISGRSYPVEVFH 765
Score = 57 (25.1 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 699 RVHIHPSSGLAQVLPR-WVVYHELVLTTKEYMRQVTELKP 737
+ +HPSS + W++Y E V + Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQTYGWLLYQEKVRYARVYLRETTLITP 1289
Score = 45 (20.9 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKC 464
+K V GFS S+ + G ++L I+ A+ AG G C
Sbjct: 1182 MKLVRAAGFSSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMC 1230
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 376 (137.4 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 120/456 (26%), Positives = 203/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 714
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +
Sbjct: 715 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVH 771
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 772 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MA 830
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 831 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 889
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 890 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 947
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R + W E + + ENY++ ++ A +R + GL+
Sbjct: 948 DKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLI 1005
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1006 KQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1064
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1065 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1100
Score = 367 (134.2 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 574 PSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 633
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 634 VIKVPGFMYPVKEHY 648
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 398 (145.2 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 106/323 (32%), Positives = 164/323 (50%)
Query: 341 ILVFLTGQEEIE-TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARK 399
IL+FL G +EI D IL R + +++N+ T Q K+ + P G RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKR-FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 400 VVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRT 459
++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA+QR GR+GR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 460 GPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFI----DPPP 515
PG CFRL++ + ++ T PE+ R L + L K L + DF+ +PPP
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPP 802
Query: 516 XXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAA 575
+LT++G +A+ P++P L KM++ + KC D I+TIA
Sbjct: 803 ALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIAC 862
Query: 576 MLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW----CY 630
L+ + + Q A R F G DH+ALLR + +W++ S W C
Sbjct: 863 TLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAFCE 921
Query: 631 ENYIQVRSMKRARDIRDQLEGLL 653
+N++ +M+ +R QL G L
Sbjct: 922 KNFLSQATMEIIIGMRTQLLGQL 944
Score = 344 (126.2 bits), Expect = 3.0e-64, Sum P(2) = 3.0e-64
Identities = 74/189 (39%), Positives = 116/189 (61%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG---KVGCTQP 183
R++LP++ ++E+++ + E +V++IVGETGSGKTTQIPQ+L + + K G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 184 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC-TSEKTILKYMTDGMLLREILS-EPNL 241
E ++G +GY IR E S KT+L + T+G+LLR +++ + L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
+ + ++VDE HER +D L L+DL++ LKL++SSA LD F YFGS P+
Sbjct: 308 STVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIY 367
Query: 302 IPGRRYPVE 310
I GR + V+
Sbjct: 368 IQGRPFEVK 376
Score = 177 (67.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 55/222 (24%), Positives = 97/222 (43%)
Query: 512 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEII 571
+PPP +LT++G +A+ P++P L KM++ + KC D I+
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 858
Query: 572 TIAAMLSVGNSIFYRPKDKQVHADN-ARMNFHLGNVGDHIALLRVYNSWRECNYSTQW-- 628
TIA L+ + + Q A R F G DH+ALLR + +W++ S W
Sbjct: 859 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWER 917
Query: 629 --CYENYIQVRSMKRARDIRDQLEGLLE-----RV----EI-EVTSNLNDLDAIKKAITS 676
C +N++ +M+ +R QL G L R +I +V +N + +K A+ +
Sbjct: 918 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVA 977
Query: 677 GFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVY 718
G +P+ + + T R+ P+ ++ + VY
Sbjct: 978 GMYPNLVHVDRENVVLTGPKDSRIWRTPTQTVSMSVWNVCVY 1019
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 372 (136.0 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 688
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 689 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVH 745
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 746 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 804
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 805 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 863
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 864 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 921
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 922 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLI 979
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 980 KQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1038
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1039 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1074
Score = 368 (134.6 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 487
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 412 (150.1 bits), Expect = 4.1e-64, Sum P(2) = 4.1e-64
Identities = 109/322 (33%), Positives = 158/322 (49%)
Query: 311 IHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIA 370
I Y + DY D + I T G ILVFL G EI L R G+
Sbjct: 856 IKYIASAVVDY-DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGD 914
Query: 371 ELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSY 430
L+ P+++++ + Q K+F P+G RKV++ATNIAETS+TI+ + YVID G K Y
Sbjct: 915 WLL--PLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRY 972
Query: 431 NPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNL 490
NP + S++ +SKA+A QR GR+GR PG CF LYT H + K M VPE+ R L
Sbjct: 973 NPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPL 1032
Query: 491 ANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEF 548
+ L +K LG+ + F ++PP ELT +G +A+
Sbjct: 1033 VELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKL 1092
Query: 549 PLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ--------VHADNARMN 600
P+D ++ KM++ C I++IAA LS S F KD+Q + +D +
Sbjct: 1093 PVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESS 1152
Query: 601 FHLGN---VGDHIALLRVYNSW 619
+L N DH+ ++ Y W
Sbjct: 1153 SNLNNNDRQSDHLLMVVAYEKW 1174
Score = 328 (120.5 bits), Expect = 4.1e-64, Sum P(2) = 4.1e-64
Identities = 79/220 (35%), Positives = 123/220 (55%)
Query: 108 SELPDKSKEKSALEMLQEERKT---LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP 164
S L K + K ++ ++ KT LPI + ++LQ + E VLV+ GETGSGKTTQ+P
Sbjct: 572 SSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVP 631
Query: 165 QYLHE----AGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSE 219
Q++ + +G+ + CTQP E + V Y +R ++ S+
Sbjct: 632 QFILDDMIDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSD 691
Query: 220 KTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRS-D--- 275
KT L + T G+LLR+++ + L+ + ++VDE HER+L D L +LK LI+ +S D
Sbjct: 692 KTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNAL 751
Query: 276 --LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
LK+++ SAT+DA +FS YFG PI GR +PV ++
Sbjct: 752 PKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYF 791
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 372 (136.0 bits), Expect = 5.1e-64, Sum P(2) = 5.1e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 716
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 717 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVH 773
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 774 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 832
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 833 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 891
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 892 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 949
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 950 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLI 1007
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1008 KQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1066
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1067 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1102
Score = 368 (134.6 bits), Expect = 5.1e-64, Sum P(2) = 5.1e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 372 (136.0 bits), Expect = 6.0e-64, Sum P(2) = 6.0e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 688
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 689 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVH 745
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 746 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 804
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 805 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 863
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 864 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 921
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 922 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE-ENLLYAPSLRF-IHGLI 979
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 980 KQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1038
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1039 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1074
Score = 367 (134.2 bits), Expect = 6.0e-64, Sum P(2) = 6.0e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 372 (136.0 bits), Expect = 6.0e-64, Sum P(2) = 6.0e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 688
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 689 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVH 745
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 746 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 804
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 805 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 863
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 864 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 921
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 922 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE-ENLLYAPSLRF-IHGLI 979
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 980 KQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1038
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1039 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1074
Score = 367 (134.2 bits), Expect = 6.0e-64, Sum P(2) = 6.0e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 372 (136.0 bits), Expect = 6.4e-64, Sum P(2) = 6.4e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 652 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 711
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 712 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVH 768
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 769 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 827
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 828 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 886
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 887 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 944
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 945 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE-ENLLYAPSLRF-IHGLI 1002
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1003 KQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1061
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1062 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1097
Score = 367 (134.2 bits), Expect = 6.4e-64, Sum P(2) = 6.4e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 452 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 510
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 511 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 570
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 571 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 630
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 631 VIKVPGFMYPVKEHY 645
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 372 (136.0 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 119/456 (26%), Positives = 202/456 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEIL 358
K+ +YP + ++ + +D +VT L +H+ PG IL FL G +EI+ + L
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRL 716
Query: 359 KHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKY 418
+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++ I +
Sbjct: 717 QE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVH 773
Query: 419 VIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMD 478
V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K M
Sbjct: 774 VVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MV 832
Query: 479 DNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXX 534
VPEI RT L N+VL K + + + +F +D P
Sbjct: 833 PFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQ 891
Query: 535 XGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 892 REYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEV 949
Query: 595 DNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D + + DH+A +R W E + + ENY++ ++ A +R + GL+
Sbjct: 950 DKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE-ENLLYAPSLRF-IHGLI 1007
Query: 654 ERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ 710
++ + D + + +L K G +P + + Q
Sbjct: 1008 KQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQ 1066
Query: 711 --VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
P V Y ++L R+ T L+ WL
Sbjct: 1067 GKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1102
Score = 367 (134.2 bits), Expect = 6.5e-64, Sum P(2) = 6.5e-64
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 149/450 (33%), Positives = 241/450 (53%)
Query: 130 LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXX 189
LP+ +LL A+ + V+ G+GKTT++P L +A + ++ +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 190 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMV 249
+ +G + G VGY+IRF+ S +T ++ +T+G+L R + S+P LE ++
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 250 DEAHERTLSTDILFGLLKDL-IKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
DE HER++ +D+ L +D+ R DL++++ SAT+ A + G AP+ GR YP
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 309 VEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSK 368
V + + + + + +A+ ++I V + GDIL FL G EI ++L
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPGVGEIRRCGQLLADDP----PL 239
Query: 369 IAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVK 428
A L++ P+Y +LP Q + P P G RKVVLAT IAETSLTI+G++ V+D G ++
Sbjct: 240 HAPLVV-PLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRL 297
Query: 429 SYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRT 488
Y+P +G+ L+ +S ASA QRAGR+GR GPG C+RL+ H+ + + PEI
Sbjct: 298 RYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADP-PEILIA 356
Query: 489 NLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEF 548
+LA + L L G+ D + ++DPPP G +T+ GRRMAE
Sbjct: 357 DLAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETGRRMAEL 416
Query: 549 PLDPMLSKMIVASDKDKCSDEIITIAAMLS 578
PL P L+ M++ + + + +AA+L+
Sbjct: 417 PLHPRLAHMLLRATERGPAPLACDVAALLT 446
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 368 (134.6 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
Score = 368 (134.6 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 120/459 (26%), Positives = 203/459 (44%)
Query: 301 KIPGRRYPVEIHYTKAPEAD---YIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETAD 355
K+ +YP + + P ++ +D +VT L +H+ PG IL FL G +EI+
Sbjct: 657 KLGKHQYPHRHRHHEWPRSEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 716
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
+ L+ LG ++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+T++
Sbjct: 717 QRLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVND 773
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I +V+D G K + Y+ +T + L +S+A+ +QR GR+GR G + L+ K
Sbjct: 774 IVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK 833
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXX 531
M VPEI RT L N+VL K + + + +F +D P
Sbjct: 834 -MVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGV 891
Query: 532 XXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
LT +G+R+A DP L+K IV + +C ++ + + L+ F +
Sbjct: 892 LDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNR 949
Query: 592 VHADNARMNFHLGNVGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLE 650
D + + DH+A +R W E + + ENY++ ++ A +R +
Sbjct: 950 AEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IH 1007
Query: 651 GLLERVEIEVTSNL---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
GL+++ + D + + +L K G +P + +
Sbjct: 1008 GLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKV 1066
Query: 708 LAQ--VLPRWVVYH----ELVLTTKEYMRQVTELKPEWL 740
Q P V Y ++L R+ T L+ WL
Sbjct: 1067 TRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWL 1105
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 369 (135.0 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 82/195 (42%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 401 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 459
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCT-SEKTILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E S L + T G+LLR++ S
Sbjct: 460 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 519
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 520 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 579
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 580 VIKVPGFMYPVKEHY 594
Score = 365 (133.5 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 119/445 (26%), Positives = 196/445 (44%)
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEILKHRTRGLGSKI 369
H+ E +D +VT L +H+ PG IL FL G +EI+ + L+ LG
Sbjct: 613 HHESEDECA-LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE---ALGMHE 668
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +V+D G K +
Sbjct: 669 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEER 728
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
Y+ +T + L +S+A+ +QR GR+GR G + L+ K M VPEI RT
Sbjct: 729 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTP 787
Query: 490 LANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L N+VL K + + + +F +D P LT +G+R+
Sbjct: 788 LENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRL 846
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
A DP L+K IV + +C ++ + + L+ F + D + +
Sbjct: 847 AHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDS 904
Query: 606 VGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNL 664
DH+A +R W E + + ENY++ ++ A +R + GL+++ +
Sbjct: 905 GSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLIKQFSENIYEAF 962
Query: 665 ---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ--VLPRWVVYH 719
D + + +L K G +P + + Q P V Y
Sbjct: 963 LVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1021
Query: 720 ----ELVLTTKEYMRQVTELKPEWL 740
++L R+ T L+ WL
Sbjct: 1022 TKSGNILLHKSTINREATRLRSRWL 1046
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 369 (135.0 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 82/195 (42%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCT-SEKTILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E S L + T G+LLR++ S
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 547
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
Score = 365 (133.5 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 119/445 (26%), Positives = 196/445 (44%)
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEILKHRTRGLGSKI 369
H+ E +D +VT L +H+ PG IL FL G +EI+ + L+ LG
Sbjct: 641 HHESEDECA-LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE---ALGMHE 696
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
++ +I P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +V+D G K +
Sbjct: 697 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEER 756
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
Y+ +T + L +S+A+ +QR GR+GR G + L+ K M VPEI RT
Sbjct: 757 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTP 815
Query: 490 LANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L N+VL K + + + +F +D P LT +G+R+
Sbjct: 816 LENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRL 874
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
A DP L+K IV + +C ++ + + L+ F + D + +
Sbjct: 875 AHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDS 932
Query: 606 VGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNL 664
DH+A +R W E + + ENY++ ++ A +R + GL+++ +
Sbjct: 933 GSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLIKQFSENIYEAF 990
Query: 665 ---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ--VLPRWVVYH 719
D + + +L K G +P + + Q P V Y
Sbjct: 991 LVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1049
Query: 720 ----ELVLTTKEYMRQVTELKPEWL 740
++L R+ T L+ WL
Sbjct: 1050 TKSGNILLHKSTINREATRLRSRWL 1074
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 403 (146.9 bits), Expect = 9.0e-63, Sum P(3) = 9.0e-63
Identities = 113/352 (32%), Positives = 173/352 (49%)
Query: 320 DYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIIC-PIY 378
D +++ I+ ++ V + ILVF+ G +I L I + I C P++
Sbjct: 880 DVVESLILHLVN-GVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLH 938
Query: 379 ANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMES 438
++L + Q K+FE P G KVV+ATNIAETS+TI+ ++ V+D G ++N TG
Sbjct: 939 SSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSV 998
Query: 439 LLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLA----NVV 494
+ SKAS QRAGR+GRT G CF+++T + + D PEI RT+L +V
Sbjct: 999 MSEEWTSKASCRQRAGRAGRTSSGLCFKVFT-KSMESQLQDQDTPEILRTSLQQLCLHVK 1057
Query: 495 LILKS---LGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXG----ELTKVGRRMAE 547
L LK+ I D +N I+PP ELT +G +A
Sbjct: 1058 LFLKNNKNTTIQDFLN-RAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYHLAS 1116
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVG 607
P+D + KM++ +C D I+TIAA L+ S F P DK + + F N
Sbjct: 1117 LPVDVYIGKMLLFGCIFRCLDPILTIAATLNY-KSPFLNPPDKTIRPMD---KFSSPNQS 1172
Query: 608 DHIALLRVYNSWREC---NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
DH L+ YNSWR+ Q+C ENY+ + +++ +D++ Q +L +
Sbjct: 1173 DHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSEI 1224
Score = 331 (121.6 bits), Expect = 9.0e-63, Sum P(3) = 9.0e-63
Identities = 82/256 (32%), Positives = 139/256 (54%)
Query: 70 KYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEM-LQEERK 128
K + N N +N+ + ++ V++ + +++ EL ++ ++ + ++R+
Sbjct: 564 KQQNNNNNNNNNNNNNNNNNNNYNYKKVLNEKEKLKINKELKNEYDRLIKVDKGVIKKRE 623
Query: 129 TLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-GK---VGCTQPX 184
+LP++ + E L+ + E QV+VI ETG GK+TQIPQY+ E+ +++ G + CTQP
Sbjct: 624 SLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVCTQPR 683
Query: 185 XXXXXXXXXXXXQEMGV-----KLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
E +G VGY IR E S+ T L + T G+LLR IL
Sbjct: 684 RISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRILDVS 743
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP- 298
N+ S +++DE HER+ D L +L+++I R DLK+++ SATL+A++ ++YF
Sbjct: 744 NISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKCTDD 803
Query: 299 -IFKIPGRRYPVEIHY 313
IF IPG +PV+ Y
Sbjct: 804 SIFSIPGFTFPVKNIY 819
Score = 67 (28.6 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 610 IALLRVYNSWRECNYSTQWCYE--NYIQVRSMKRARDIRDQL-EGLLERVEIEVTSNLND 666
IA L+ + NYS E YI + +++ I L G+ ++ +
Sbjct: 1236 IAKLQQQQQQKGNNYSNDCIDEFVGYIYNSNSSKSKIITSVLCAGMYPKIARIDYPDAKY 1295
Query: 667 LDAIKKAITSGFFPHSAKL-QKNGSYWTVKHPQRVHIHP-SSGLAQ---VLPRWVVYHEL 721
AI + + P S L K + K +RV IHP S+ + V P +++Y++
Sbjct: 1296 SQTASGAIKNKYSPESLLLLTKPPNCGPGKPLERVFIHPRSTNFKEGEWVYP-FIIYNDK 1354
Query: 722 VLTTKEYMRQVTELKP 737
V T+K ++ +T L P
Sbjct: 1355 VKTSKLFLHHITNLSP 1370
Score = 41 (19.5 bits), Expect = 9.0e-63, Sum P(3) = 9.0e-63
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 9 NNVKSLQYRIPDAYDEEGHVNQEKR----FAVSLQRYNLDSAGDKMNPFAEQEAWEE 61
NN KS+ I D D++ + + F V L + L+ + N F + +E
Sbjct: 358 NNTKSIYNDINDDDDDDDDDDDDDELIVFFKVYLNLFKLNENNNNNNQFTNDDDIKE 414
Score = 39 (18.8 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 66 KASLKYGSKNKNQSNDYEYVFEDKIDFIRDSVIDGENL 103
K L N+N +N+ ++ +D I +I+ E L
Sbjct: 388 KVYLNLFKLNENNNNNNQFTNDDDIKEQSKEIIENEIL 425
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 365 (133.5 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 103/333 (30%), Positives = 159/333 (47%)
Query: 312 HYTKAPEAD--YIDAAIVT--VLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
HY D +D ++T VLQI PG IL FL G +EI+ + L LGS
Sbjct: 681 HYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGS 737
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
+ + ++ P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +V+D G K
Sbjct: 738 QNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKE 797
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
+ Y+ +T + L +SK++ +QR GR+GR G + L+ K M VPEI R
Sbjct: 798 ERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILR 856
Query: 488 TNLANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGR 543
T L N+V+ K + + + +F+ D P LT +G+
Sbjct: 857 TPLENLVVQAK-IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGK 915
Query: 544 RMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL 603
R+A+ DP L+K IV + +C ++ I + L+ F + D A+
Sbjct: 916 RLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSR 973
Query: 604 GNVGDHIALLRVYNSWREC-NYSTQWCYENYIQ 635
+ DH+A +R W E +NY+Q
Sbjct: 974 ESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQ 1006
Score = 361 (132.1 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VG 179
+E LP+ P++D +L A+ + V+VI G+TG GKTT+IPQ L E Y +G+ V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP QE+G + VGY +R E + L + T G+LLR++
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK + K DL+L++ SAT D ++FS YFG P
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCP 651
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ +Y
Sbjct: 652 VVKVPGFMYPVKEYY 666
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 365 (133.5 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 103/333 (30%), Positives = 159/333 (47%)
Query: 312 HYTKAPEAD--YIDAAIVT--VLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
HY D +D ++T VLQI PG IL FL G +EI+ + L LGS
Sbjct: 681 HYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGS 737
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
+ + ++ P+++N+P Q IF+ P G RK+VLATNIAETS+TI+ I +V+D G K
Sbjct: 738 QNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKE 797
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
+ Y+ +T + L +SK++ +QR GR+GR G + L+ K M VPEI R
Sbjct: 798 ERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILR 856
Query: 488 TNLANVVLILKSLGIDDLVNFDFI----DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGR 543
T L N+V+ K + + + +F+ D P LT +G+
Sbjct: 857 TPLENLVVQAK-IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGK 915
Query: 544 RMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHL 603
R+A+ DP L+K IV + +C ++ I + L+ F + D A+
Sbjct: 916 RLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSR 973
Query: 604 GNVGDHIALLRVYNSWREC-NYSTQWCYENYIQ 635
+ DH+A +R W E +NY+Q
Sbjct: 974 ESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQ 1006
Score = 361 (132.1 bits), Expect = 1.7e-62, Sum P(2) = 1.7e-62
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-----VG 179
+E LP+ P++D +L A+ + V+VI G+TG GKTT+IPQ L E Y +G+ V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 180 CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP QE+G + VGY +R E + L + T G+LLR++
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK + K DL+L++ SAT D ++FS YFG P
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCP 651
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ +Y
Sbjct: 652 VVKVPGFMYPVKEYY 666
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 367 (134.2 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 81/195 (41%), Positives = 114/195 (58%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGC--- 180
+E LP+ P+RD +L A+ ++ V+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 181 -TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT-ILKYMTDGMLLREILSE 238
TQP E+G L VG+ +R E + L + T G+LLR++ S
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAP 298
P+LE S ++VDE HER ++TD L LLK L + L+L++ SAT D E+FS YFG P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 299 IFKIPGRRYPVEIHY 313
+ K+PG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
Score = 358 (131.1 bits), Expect = 1.9e-62, Sum P(2) = 1.9e-62
Identities = 118/445 (26%), Positives = 195/445 (43%)
Query: 312 HYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEILKHRTRGLGSKI 369
H+ E +D +VT L +H+ PG IL FL G +EI+ + L+ LG
Sbjct: 641 HHESEDECA-LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE---ALGMHE 696
Query: 370 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKS 429
++ +I P+++N+P Q IF+ P G RK+VLATNIAETS TI+ I +V+D G K +
Sbjct: 697 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEER 756
Query: 430 YNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTN 489
Y+ +T + L +S+A+ +QR GR+GR G + L+ K M VPEI RT
Sbjct: 757 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTP 815
Query: 490 LANVVLILKSLGIDDLVNFDF----IDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
L N+VL K + + + +F +D P LT +G+R+
Sbjct: 816 LENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRL 874
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGN 605
A +P L+K IV + +C ++ + + L+ F + D + +
Sbjct: 875 AHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDS 932
Query: 606 VGDHIALLRVYNSWREC-NYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNL 664
DH+A +R W E + + ENY++ ++ A +R + GL+++ +
Sbjct: 933 GSDHLAFVRAVAGWEEVLRWQDRSSRENYLE-ENLLYAPSLRF-IHGLIKQFSENIYEAF 990
Query: 665 ---NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQ--VLPRWVVYH 719
D + + +L K G +P + + Q P V Y
Sbjct: 991 LVGKPSDCTLASAQCNEYSEEEELVK-GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1049
Query: 720 ----ELVLTTKEYMRQVTELKPEWL 740
++L R+ T L+ WL
Sbjct: 1050 TKSGNILLHKSTINREATRLRSRWL 1074
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 412 (150.1 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 103/290 (35%), Positives = 150/290 (51%)
Query: 331 QIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIF 390
++ + Q G IL+FL G EI A +L R L L + P++A+L T+ Q K+F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRACGML----RSLNC----LHVLPLHASLETKEQRKVF 931
Query: 391 EPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAM 450
P P G RKVV+ATN+AETS+TID I V+D G K SY+ M L S A+
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 451 QRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDF 510
QR GR+GR G+C++LYT M + PE++R L + L ++++GI D+ F
Sbjct: 992 QRRGRAGRVQAGECYKLYT-RKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLA 1050
Query: 511 IDP-PPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDE 569
P PP ELT +GR++A P D K++V C ++
Sbjct: 1051 RAPTPPEAAAVEGAITMLRRMGCLDGEELTALGRQLAAIPADLRCGKLMVYGAVFGCLED 1110
Query: 570 IITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
+++AA+LS G +F P DK+ A AR F G+ GD + LR + +W
Sbjct: 1111 CVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGD-GDLLTDLRAFQAW 1159
Score = 312 (114.9 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 77/204 (37%), Positives = 114/204 (55%)
Query: 126 ERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQY----LHEAGYTKQGKVGCT 181
+R+ LP + RDE+++ V E+QV +I GETGSGK+TQ Q+ L+ G + T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 182 QPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI-LSEPN 240
QP E ++G EVGY IR E T KT + ++T G+LLR + +S
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGR 748
Query: 241 LESY-------SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
+E S +++DE HER+L TD L +++D++K R DLKL++ SATLD+ F+ Y
Sbjct: 749 VEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASY 808
Query: 294 FGSAPI----FKIPGRRYPVEIHY 313
F I +I GR +PV +Y
Sbjct: 809 FVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 46 (21.3 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 699 RVHIHPSSGL--AQVLP---RWVVYHELVLTTKEYMRQVT 733
RV +HPSS L +Q ++ Y ++ T+K ++R +T
Sbjct: 1282 RVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLT 1321
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 376 (137.4 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 103/347 (29%), Positives = 171/347 (49%)
Query: 318 EADYIDAAIVTVLQIHVTQS--PGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIIC 375
E+D + ++ L +H+ PG ILVFL G I + L++ T G ++ I
Sbjct: 632 ESD-VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQN-TNIFGDT-SQYQIL 688
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
P ++ +P + Q K+FEP PEG K++L+TNIAETS+TID I +VID +++K +
Sbjct: 689 PCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNN 748
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
+ S SK + QR GR+GR PG CF L + + ++DN PE+ RT L + L
Sbjct: 749 LTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQA-LEDNLTPEMFRTPLHEMAL 807
Query: 496 ILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPM 553
+K L + + +F ++PPP ELT +GR +A P++P
Sbjct: 808 TIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPR 867
Query: 554 LSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALL 613
L KM+V C+D + +A+ S + +F ++ A++ + DH+A++
Sbjct: 868 LGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKA-LSGTKCSDHVAMI 926
Query: 614 RVYNSWREC-----NYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
WR + ++C +Q+ +M D + QL LL++
Sbjct: 927 VASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQ 973
Score = 341 (125.1 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 81/219 (36%), Positives = 121/219 (55%)
Query: 98 IDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGS 157
ID ++D S L D+ + + E R+ LPI R E+L A+N+ V++I G TG
Sbjct: 353 IDDLSMDYERS-LRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGC 411
Query: 158 GKTTQIPQYLHEAGYTKQGKVG-----CTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 212
GKTTQI QY+ + Y G+ G TQP +E +LG VGYS+R
Sbjct: 412 GKTTQIAQYILD-DYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVR 470
Query: 213 FEDCTSEKT-ILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIK 271
FE + + T G+LLR++ E L S ++VDE HER +++D L +L+D++
Sbjct: 471 FESVFPRPYGAILFCTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVD 528
Query: 272 FRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 310
DL +++ SAT+D KFS YFG P+ ++PGR +PV+
Sbjct: 529 TYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQ 567
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 619 (223.0 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 165/492 (33%), Positives = 259/492 (52%)
Query: 213 FEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF 272
FE S+KT L ++T+G+LLR++ + LE Y+V+++DE HER L++D+L GLL+DL
Sbjct: 153 FETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTK 212
Query: 273 RSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAA------- 325
R DLKL++ SAT++ + F YF AP+ ++PGR +P+++ + P +ID +
Sbjct: 213 RDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWH--PIKQFIDQSDKKTHKI 270
Query: 326 ----IVTVLQIHVTQSP----GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPI 377
+ +L++ Q P GD L+FL G EI E LK+ II +
Sbjct: 271 DPEPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELTNG----WIILML 326
Query: 378 YANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGME 437
++ L E Q K+F+ P G RK +L+TN+AETS+TIDGI++VID G + + P TG +
Sbjct: 327 HSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQ 386
Query: 438 SLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLIL 497
L +SKASA QR GR+GRTGPG C+RLY+ + K MDD TV EI R +L + L +
Sbjct: 387 KLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEK-MDDFTVSEINRVSLQEMALKM 445
Query: 498 KSLGID-DLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXX-GE---LTKVGRRMAEFPLDP 552
SL + D F FI+ P G+ LT +G +++ P++
Sbjct: 446 ISLNLGLDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEV 505
Query: 553 MLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIAL 612
++KM+V + ++T+AA LSV S F +++ R + +GD L
Sbjct: 506 PIAKMLVYGCVVDELEVMLTVAAGLSV-QSPFTNRSYRELEIVERRASL-TSPLGDPFTL 563
Query: 613 LRVYNSW--RECNYST--QWCYENYIQVRSMKRARDIRDQLEGLLER---VEIEVTSNLN 665
+ ++ W ++ T +W EN I + +R Q +LE VE +
Sbjct: 564 ISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILEDAGLVEKASAAETG 623
Query: 666 DLDAIKKAITSG 677
+ D+ ++ I G
Sbjct: 624 EDDSRQRRIDQG 635
Score = 41 (19.5 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 668 DAIKKAITSGFFPHSAKLQKNGSYW----TVKHPQR---VHIHPSSGLAQVLPRWV 716
+ ++ I +G +P+ + L Y H + IHP+S +AQ P +
Sbjct: 715 EVVRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHPNSSIAQYHPETI 770
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 336 (123.3 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 73/210 (34%), Positives = 121/210 (57%)
Query: 110 LPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE 169
+P KSK + LQ+ R +LP Y D++L++++ V++I G TG GKTTQ+PQ++ +
Sbjct: 164 IPPKSK---CSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILD 220
Query: 170 AGY--TKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
+ K +V TQP +E G +G VGY +R + S+ T+L Y T
Sbjct: 221 EAHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCT 280
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
G+LLR + S+P + +++DE HER ++TD L L++ +K R DLK+++ SAT++
Sbjct: 281 TGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEG 340
Query: 288 --EKFSDYFG--SAPIFKIPGRRYPVEIHY 313
+ FS+YF S + +I R + V++ Y
Sbjct: 341 NMQLFSNYFENHSMDVIRIESRAFDVKVFY 370
Score = 290 (107.1 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 75/249 (30%), Positives = 130/249 (52%)
Query: 271 KFRSDLKLLISSATLDAE-KFSDYFGSAPIFKIP-GRRYPVEIHYTKAPEADYIDAAIVT 328
KF+ +LK + T+ + +D K+ G +Y + + DY+ +
Sbjct: 576 KFKEELKTALPDRTVYYHPQMNDVVDKTDFSKLRFGEKYNLFYGSSSNNSVDYV--LLDQ 633
Query: 329 VLQIHVTQSP--GDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQ 386
V+Q ++ SP G ILVFL G E+I+ + + L + +I+ P+++ + +
Sbjct: 634 VIQ-YLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSL-KNMKNVIVLPLHSQMTSINH 691
Query: 387 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISK 446
IF+ P+ RK++LATNIAE S+TI+ + +V+D G K KS++ + +L V PI++
Sbjct: 692 GDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIAR 751
Query: 447 ASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLV 506
++A QR+GR+GR G C RLYT Y+ M + + E++R + +V L K L
Sbjct: 752 SNADQRSGRAGRVANGYCIRLYTEQEYNS-MPETQIAEMKRAAIYDVTLHAKLFAPKTLK 810
Query: 507 NFDFIDPPP 515
+F+ P
Sbjct: 811 ISEFLSLAP 819
Score = 141 (54.7 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 39/140 (27%), Positives = 73/140 (52%)
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNS-IFYRPKDKQVHAD 595
ELT +GR MA PLDP LS+M++ KC I+ + A+L+ + +D+ + +
Sbjct: 872 ELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQS- 930
Query: 596 NARMNFHLG--NVGDHIALLRVYNSWRECNYS--TQWCYENYIQVRSMKRARDIRDQLEG 651
+M F + ++ DH+ +R+ N + N S Q+C ++++ +M+ + R QL
Sbjct: 931 --KMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 652 LLERVE-IEVTSNLNDLDAI 670
L R + I ++ N + L +
Sbjct: 989 ELVRAKLINISPNRDVLTVL 1008
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 374 (136.7 bits), Expect = 5.8e-61, Sum P(2) = 5.8e-61
Identities = 103/341 (30%), Positives = 167/341 (48%)
Query: 341 ILVFLTGQEEIETA-DEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARK 399
ILVFL G EI DE+L T G II +++++ ++ Q K F P+G RK
Sbjct: 922 ILVFLPGMAEIRRLNDELLSEPTFQHG-----WIIHALHSSIASDEQEKAFVVPPDGMRK 976
Query: 400 VVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRT 459
+V+ATNIAET +TI I VID G K ++ R + L+ IS+A+A QR GR+GR
Sbjct: 977 IVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRV 1036
Query: 460 GPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILK--SLGIDDLVNFDFIDPPPXX 517
G CF ++T H + + + PE+ R +L ++VL +K LG + + +DPP
Sbjct: 1037 QRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSK 1096
Query: 518 XXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAML 577
LT +G+++A+ PLD L K+I+ KC D I+IAA+L
Sbjct: 1097 NIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAIL 1156
Query: 578 SVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYST-----QWCYEN 632
S S F + R+ F G+ D + + Y +W+ + +C +N
Sbjct: 1157 SC-KSPFVNTMGSNAQKEAVRLGFRRGD-SDLLTVYNAYCAWKRTRSTPGANEYAFCRKN 1214
Query: 633 YIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKA 673
++ +++ D++ QL + + VT + N ++ +A
Sbjct: 1215 FLSPQTLLNIEDVKLQLMVSIADAGL-VTLDTNQKASLNRA 1254
Score = 339 (124.4 bits), Expect = 5.8e-61, Sum P(2) = 5.8e-61
Identities = 71/229 (31%), Positives = 128/229 (55%)
Query: 93 IRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIV 152
+R + ++E S++ + A + + + R LPI+ +++E+L +N ++ L+I
Sbjct: 608 VRAGAKEAPGINEQLSQIWMEKASTPAFQYMVQSRMQLPIWTFKNEILNTLNSHRALIIC 667
Query: 153 GETGSGKTTQIPQYL--HEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVK---LGHE- 206
ETGSGK+TQIP ++ HE + K+ T+P +E+G +G
Sbjct: 668 SETGSGKSTQIPSFILEHEMLSGRPCKIYVTEPRRISAISLARRVSEELGESKNDVGTSR 727
Query: 207 --VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFG 264
+G+++R E S T L + T G+++R + + + + +++DE HER++ +D L
Sbjct: 728 SLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDDFQDITHVVLDEVHERSIDSDFLLI 787
Query: 265 LLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
+L+ L++ R DLKL++ SAT+DA +FS Y G P+ IPGR +PVE +
Sbjct: 788 VLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKF 836
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 390 (142.3 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
Identities = 115/393 (29%), Positives = 183/393 (46%)
Query: 332 IHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFE 391
I + PG +LVFL G I + L+ G + I P+++ +P E Q ++FE
Sbjct: 650 IETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYR---ILPLHSQIPREEQRRVFE 706
Query: 392 PTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQ 451
P P+G KV+L+TNIAETS+TI+ + +V+D KVK + M + SK + Q
Sbjct: 707 PVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQ 766
Query: 452 RAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF--D 509
R GR+GR PG CF L + + K ++ + PEI RT L V L +K L + + NF
Sbjct: 767 RKGRAGRVRPGFCFHLCSRARFEK-LETHMTPEIFRTPLHEVALSIKLLRLGGIGNFLSK 825
Query: 510 FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDE 569
I+PPP ELT +GR +A+ P++P L KM++ D
Sbjct: 826 AIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDA 885
Query: 570 IITIAAMLSVGNSIFYRPKDKQ-VHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQ- 627
+ TI+A K VH + A F DH+ALL V+ +W E +
Sbjct: 886 VCTISAATCFPEPFINEGKRLGFVHRNFAGSRF-----SDHVALLSVFQAWDEVRVGGED 940
Query: 628 ----WCYENYIQVRSMKRARDIRDQLEGLLERVEI-------EVTSNL---NDLDAIKKA 673
+C + + +++ + + QL+ +L V +V +N+ N+LD +
Sbjct: 941 AEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEECLLNQVFNNVGPDNNLDLVISL 1000
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
+T G +P+ ++ T + + IH SS
Sbjct: 1001 LTFGSYPNVCYHKEKRKILTTEGRNAL-IHKSS 1032
Score = 316 (116.3 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
Identities = 73/234 (31%), Positives = 129/234 (55%)
Query: 87 EDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEY 146
E + F I + L+EL+ +L ++ L+ + ER LP+ ++++++ +
Sbjct: 356 EGPLAFCTPEQISNDLLNELNYQL----EQDQNLQTILTERSQLPVKNFQEQIMSTIYNN 411
Query: 147 QVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG-C----TQPXXXXXXXXXXXXXQEMGV 201
V++I G TG GKTTQ+PQY+ + + K G+ C TQP E G
Sbjct: 412 PVVIIRGATGCGKTTQVPQYILDE-FIKGGRASDCNIVVTQPRRISAVSVAERVSFERGE 470
Query: 202 KLGHEVGYSIRFEDCTSEK--TILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLST 259
+G GYS+RFE +IL + T G+LLR++ E + S ++VDE HER ++T
Sbjct: 471 DVGKSCGYSVRFESFLPRPHASIL-FCTVGVLLRKL--ESGIRGISHVIVDEIHERDINT 527
Query: 260 DILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
D L +L+D+++ D+++++ SAT+D F +YF + P+ ++ GR +PV+ ++
Sbjct: 528 DFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYF 581
Score = 40 (19.1 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV 606
FP + +L+++ D D +I++ S N +++ K K + + H +V
Sbjct: 975 FPEECLLNQVFNNVGPDNNLDLVISLLTFGSYPNVCYHKEKRKILTTEGRNALIHKSSV 1033
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 385 (140.6 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 110/393 (27%), Positives = 185/393 (47%)
Query: 332 IHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFE 391
I PG +LVFL G I T + L++ + GS +++ P+++ +P E Q K+F+
Sbjct: 647 IETLNVPGAVLVFLPGWNLIYTMQKHLENNSH-FGSHRYQIL--PLHSQIPREEQRKVFD 703
Query: 392 PTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQ 451
P P+G KV+L+TNIAETS+TI+ + YVID KVK + M + SK + Q
Sbjct: 704 PVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQ 763
Query: 452 RAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF--D 509
R GR+GR PG CF L + + + ++ + PE+ RT L + L +K L + + F
Sbjct: 764 RKGRAGRVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAK 822
Query: 510 FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDE 569
I+PPP ELT +GR +A+ P++P KM++ D
Sbjct: 823 AIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDA 882
Query: 570 IITIAAMLSVGNSIFYRPKDK-QVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQ- 627
+ TI+A K +H NF DH+ALL V+ +W + S +
Sbjct: 883 VCTISAATCFPEPFISEGKRLGYIHR-----NFAGNRFSDHVALLSVFQAWDDARMSGEE 937
Query: 628 ----WCYENYIQVRSMKRARDIRDQLEGLL-------ERVEIEVTSNL---NDLDAIKKA 673
+C + + + +++ + + QL+ +L + + +V +N N+LD +
Sbjct: 938 AEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISL 997
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
+ G +P+ ++ T + + IH SS
Sbjct: 998 LAFGVYPNVCYHKEKRKILTTEGRNAL-IHKSS 1029
Score = 320 (117.7 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 68/214 (31%), Positives = 120/214 (56%)
Query: 105 ELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP 164
+L +EL + ++ L+ + +ER+ LP+ + E+L+A+++ V++I G TG GKTTQ+P
Sbjct: 366 DLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVP 425
Query: 165 QYLHEAGYTKQGKVGC----TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEK 220
QY+ + C TQP E G + G GYS+RFE
Sbjct: 426 QYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRP 485
Query: 221 -TILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLL 279
+ + T G+LLR++ E + S ++VDE HER ++TD L +L+D++ +++++
Sbjct: 486 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIV 543
Query: 280 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 544 LMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 577
Score = 49 (22.3 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV 606
FP D +L+++ + D D +I++ A N +++ K K + + H +V
Sbjct: 972 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1030
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 480 NTVPEIQRTNLANVVLILKSLGIDD 504
NT+ +I R + A + L++ S+ D
Sbjct: 1136 NTIRQISRPSAAGINLMIGSVRYGD 1160
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 397 (144.8 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 115/390 (29%), Positives = 183/390 (46%)
Query: 312 HYTKAPEADY-IDAAIVTVLQIHVTQSP---GDILVFLTGQEEIETADEILKHRTRGLGS 367
H+ K+ +Y + A + + +TQ G IL+FL G EI + +K + +
Sbjct: 790 HFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISST---IKEINKSSDN 846
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
K L P+++ L + Q IF+ P+G RKVV++TNIAETS+TI VID G SK
Sbjct: 847 KFMAL---PLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKN 903
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
++ + L+ S+A QR GR+GR G C+ LYT + M +PEI+R
Sbjct: 904 LFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKR 962
Query: 488 TNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
T L N+ L++KS+GI ++ F +D P LTK+G +
Sbjct: 963 TRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQE-NSLTKLGNYI 1021
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF--YRPKDKQVHADNARMNFHL 603
+ P DP +K+++ C D +T+AA+ S G+ Y +DK + F
Sbjct: 1022 SYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDK---LKQIQKKFGN 1078
Query: 604 GNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL-------ERV 656
G GD I++ YN++ N S ++ ENY+ ++K R Q LL ++
Sbjct: 1079 GQ-GDFISMANAYNAYMS-NKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKL 1136
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQ 686
+ N + I+ I F+P A++Q
Sbjct: 1137 DDSCNKNAENWPLIRGIIAGAFYPQVARIQ 1166
Score = 318 (117.0 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 77/227 (33%), Positives = 122/227 (53%)
Query: 105 ELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP 164
EL E K K + + +R LP + ++ L+ A+N QV +I GETGSGK+TQ+
Sbjct: 548 ELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVV 607
Query: 165 QYLHEAGYTKQG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT 221
Q++ + Y+K K+ CTQP +E ++G E GY IR E+ TS T
Sbjct: 608 QFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNT 667
Query: 222 ILKYMTDGMLLREILSEPN---LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKL 278
+ + T G+LLR + S L++ +++DE HER++ D L LLK +IK LK+
Sbjct: 668 RITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKI 727
Query: 279 LISSATLDAEKFSDYFGSAPI--FKIPGRRYPVEIHYTKA--PEADY 321
++ SAT+ + F ++F P+ I GR YP++ Y + E++Y
Sbjct: 728 ILLSATISVDTFINFF-EKPLTPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 44 (20.5 bits), Expect = 5.2e-32, Sum P(4) = 5.2e-32
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD 275
PN E + +V +E TL+ I ++++L+K+ +D
Sbjct: 451 PN-EIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTD 486
Score = 44 (20.5 bits), Expect = 5.2e-32, Sum P(4) = 5.2e-32
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 289 KFSDYFGSAPIFKIPGRRYPVEI---HYTKAPE----ADYIDAAIVTVLQIHVTQSPGDI 341
K F + IFK YP EI H + A+YI AIV L ++T G
Sbjct: 434 KLEHNFLNVKIFK--SENYPNEIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTDHIGQC 491
Query: 342 LVF 344
+++
Sbjct: 492 MIY 494
Score = 40 (19.1 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 704 PSSGLAQVLP-RWVVYHELVLTTKEYMRQVT 733
P S + +L +V Y TTK Y+R +T
Sbjct: 1257 PKSNVPMLLKDAFVAYRSSHHTTKLYVRDLT 1287
Score = 39 (18.8 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 9 NNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKAS 68
N +K+++ +P + + + +++R + + L NPF E++ KA
Sbjct: 138 NYIKNMKMLLPIIFRDYWNELEDERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAK 197
Query: 69 LKYGSKNKNQ 78
+ K +N+
Sbjct: 198 ERQ-IKEQNE 206
Score = 37 (18.1 bits), Expect = 3.8e-60, Sum P(4) = 3.8e-60
Identities = 20/88 (22%), Positives = 31/88 (35%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSK 74
Q I + Y+ N E + V L + L + + QE W E G G
Sbjct: 368 QDEILEVYNANN--NDEHKTCVELTKMLLPQPLESLAEPESQEIWNEEIEGLEMT--GIP 423
Query: 75 NKNQSNDYEYVFEDKIDFIRDSVIDGEN 102
K++ N E +F+ + EN
Sbjct: 424 VKHEKNVATIKLEH--NFLNVKIFKSEN 449
Score = 37 (18.1 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 11/54 (20%), Positives = 18/54 (33%)
Query: 157 SGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYS 210
S K+T P + TK K P + G+ +G G++
Sbjct: 7 SSKSTPEPTQTSASTNTKSKKKKDVTPTPSTTATQATTPKPQRGLAIGDNFGWT 60
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 397 (144.8 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 115/390 (29%), Positives = 183/390 (46%)
Query: 312 HYTKAPEADY-IDAAIVTVLQIHVTQSP---GDILVFLTGQEEIETADEILKHRTRGLGS 367
H+ K+ +Y + A + + +TQ G IL+FL G EI + +K + +
Sbjct: 790 HFYKSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISST---IKEINKSSDN 846
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
K L P+++ L + Q IF+ P+G RKVV++TNIAETS+TI VID G SK
Sbjct: 847 KFMAL---PLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKN 903
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
++ + L+ S+A QR GR+GR G C+ LYT + M +PEI+R
Sbjct: 904 LFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKR 962
Query: 488 TNLANVVLILKSLGIDDLVNF--DFIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRM 545
T L N+ L++KS+GI ++ F +D P LTK+G +
Sbjct: 963 TRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQE-NSLTKLGNYI 1021
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIF--YRPKDKQVHADNARMNFHL 603
+ P DP +K+++ C D +T+AA+ S G+ Y +DK + F
Sbjct: 1022 SYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDK---LKQIQKKFGN 1078
Query: 604 GNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL-------ERV 656
G GD I++ YN++ N S ++ ENY+ ++K R Q LL ++
Sbjct: 1079 GQ-GDFISMANAYNAYMS-NKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRKL 1136
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQ 686
+ N + I+ I F+P A++Q
Sbjct: 1137 DDSCNKNAENWPLIRGIIAGAFYPQVARIQ 1166
Score = 318 (117.0 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 77/227 (33%), Positives = 122/227 (53%)
Query: 105 ELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP 164
EL E K K + + +R LP + ++ L+ A+N QV +I GETGSGK+TQ+
Sbjct: 548 ELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVV 607
Query: 165 QYLHEAGYTKQG---KVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKT 221
Q++ + Y+K K+ CTQP +E ++G E GY IR E+ TS T
Sbjct: 608 QFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNT 667
Query: 222 ILKYMTDGMLLREILSEPN---LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKL 278
+ + T G+LLR + S L++ +++DE HER++ D L LLK +IK LK+
Sbjct: 668 RITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKI 727
Query: 279 LISSATLDAEKFSDYFGSAPI--FKIPGRRYPVEIHYTKA--PEADY 321
++ SAT+ + F ++F P+ I GR YP++ Y + E++Y
Sbjct: 728 ILLSATISVDTFINFF-EKPLTPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 44 (20.5 bits), Expect = 5.2e-32, Sum P(4) = 5.2e-32
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 239 PNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD 275
PN E + +V +E TL+ I ++++L+K+ +D
Sbjct: 451 PN-EIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTD 486
Score = 44 (20.5 bits), Expect = 5.2e-32, Sum P(4) = 5.2e-32
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 289 KFSDYFGSAPIFKIPGRRYPVEI---HYTKAPE----ADYIDAAIVTVLQIHVTQSPGDI 341
K F + IFK YP EI H + A+YI AIV L ++T G
Sbjct: 434 KLEHNFLNVKIFK--SENYPNEIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTDHIGQC 491
Query: 342 LVF 344
+++
Sbjct: 492 MIY 494
Score = 40 (19.1 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 704 PSSGLAQVLP-RWVVYHELVLTTKEYMRQVT 733
P S + +L +V Y TTK Y+R +T
Sbjct: 1257 PKSNVPMLLKDAFVAYRSSHHTTKLYVRDLT 1287
Score = 39 (18.8 bits), Expect = 2.3e-60, Sum P(4) = 2.3e-60
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 9 NNVKSLQYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKAS 68
N +K+++ +P + + + +++R + + L NPF E++ KA
Sbjct: 138 NYIKNMKMLLPIIFRDYWNELEDERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAK 197
Query: 69 LKYGSKNKNQ 78
+ K +N+
Sbjct: 198 ERQ-IKEQNE 206
Score = 37 (18.1 bits), Expect = 3.8e-60, Sum P(4) = 3.8e-60
Identities = 20/88 (22%), Positives = 31/88 (35%)
Query: 15 QYRIPDAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMNPFAEQEAWEEHQMGKASLKYGSK 74
Q I + Y+ N E + V L + L + + QE W E G G
Sbjct: 368 QDEILEVYNANN--NDEHKTCVELTKMLLPQPLESLAEPESQEIWNEEIEGLEMT--GIP 423
Query: 75 NKNQSNDYEYVFEDKIDFIRDSVIDGEN 102
K++ N E +F+ + EN
Sbjct: 424 VKHEKNVATIKLEH--NFLNVKIFKSEN 449
Score = 37 (18.1 bits), Expect = 8.4e-32, Sum P(4) = 8.4e-32
Identities = 11/54 (20%), Positives = 18/54 (33%)
Query: 157 SGKTTQIPQYLHEAGYTKQGKVGCTQPXXXXXXXXXXXXXQEMGVKLGHEVGYS 210
S K+T P + TK K P + G+ +G G++
Sbjct: 7 SSKSTPEPTQTSASTNTKSKKKKDVTPTPSTTATQATTPKPQRGLAIGDNFGWT 60
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 385 (140.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 110/393 (27%), Positives = 185/393 (47%)
Query: 332 IHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFE 391
I PG +LVFL G I T + L++ + GS +++ P+++ +P E Q K+F+
Sbjct: 646 IETLNVPGAVLVFLPGWNLIYTMQKHLENNSH-FGSHRYQIL--PLHSQIPREEQRKVFD 702
Query: 392 PTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQ 451
P P+G KV+L+TNIAETS+TI+ + YVID KVK + M + SK + Q
Sbjct: 703 PVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQ 762
Query: 452 RAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNF--D 509
R GR+GR PG CF L + + + ++ + PE+ RT L + L +K L + + F
Sbjct: 763 RKGRAGRVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAK 821
Query: 510 FIDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDE 569
I+PPP ELT +GR +A+ P++P KM++ D
Sbjct: 822 AIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDA 881
Query: 570 IITIAAMLSVGNSIFYRPKDK-QVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQ- 627
+ TI+A K +H NF DH+ALL V+ +W + S +
Sbjct: 882 VCTISAATCFPEPFISEGKRLGYIHR-----NFAGNRFSDHVALLSVFQAWDDARMSGEE 936
Query: 628 ----WCYENYIQVRSMKRARDIRDQLEGLL-------ERVEIEVTSNL---NDLDAIKKA 673
+C + + + +++ + + QL+ +L + + +V +N N+LD +
Sbjct: 937 AEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISL 996
Query: 674 ITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSS 706
+ G +P+ ++ T + + IH SS
Sbjct: 997 LAFGVYPNVCYHKEKRKILTTEGRNAL-IHKSS 1028
Score = 318 (117.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 68/214 (31%), Positives = 119/214 (55%)
Query: 105 ELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP 164
+L +EL + ++ L+ + +ER+ LP+ + E+L+A++ V++I G TG GKTTQ+P
Sbjct: 365 DLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVP 424
Query: 165 QYLHEAGYTKQGKVGC----TQPXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEK 220
QY+ + C TQP E G + G GYS+RFE
Sbjct: 425 QYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRP 484
Query: 221 -TILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLL 279
+ + T G+LLR++ E + S ++VDE HER ++TD L +L+D++ +++++
Sbjct: 485 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIV 542
Query: 280 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHY 313
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 543 LMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 576
Score = 49 (22.3 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNV 606
FP D +L+++ + D D +I++ A N +++ K K + + H +V
Sbjct: 971 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1029
Score = 38 (18.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 480 NTVPEIQRTNLANVVLILKSLGIDD 504
NT+ +I R + A + L++ S+ D
Sbjct: 1134 NTIRQISRPSAAGINLMIGSVRYGD 1158
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 157/461 (34%), Positives = 235/461 (50%)
Query: 129 TLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIP-QYLHEAGYTKQGKVGCTQPXXXX 187
+LP+ ELL A++ +++ TG+GK+T +P Q L G GK+ +P
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGIN--GKIILLEPRRLA 60
Query: 188 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
+ + K G VGY +R ++C T L+ +T+G+L R I +P L ++
Sbjct: 61 ARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLV 120
Query: 248 MVDEAHERTLSTDILFGLLKDLIK-FRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
++DE HER+L D+ LL D+ + R DLKLLI SATLD ++ AP+ GR
Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRS 180
Query: 307 YPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG 366
+PVE Y P D A+ + Q G +L+FL G EI+ E L R +G
Sbjct: 181 FPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASR---IG 237
Query: 367 SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSK 426
S ++++CP+Y L Q K P P+G RKVVLATNIAETSLTI+GI+ V+D +
Sbjct: 238 S---DVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQER 294
Query: 427 VKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQ 486
V ++PRTG+ L+ +S+AS QRAGR+GR PG L + + PEI
Sbjct: 295 VARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSE-PEIL 353
Query: 487 RTNLANVVLILKSLGIDDLVNFDFIDPPPXXXXXXXXXXXXXXXXXXXXGE-LTKVGRRM 545
+++L+ +++ L G D ++D PP GE L+ G++M
Sbjct: 354 QSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALE--GERLSAQGQKM 411
Query: 546 AEFPLDPMLSKMIVASDKDKCSDEIITIAAMLS----VGNS 582
A DP L+ M+V++ D + IAA+L +GNS
Sbjct: 412 AALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNS 452
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 755 722 0.00085 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 624 (66 KB)
Total size of DFA: 383 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.27u 0.12s 65.39t Elapsed: 00:00:04
Total cpu time: 65.36u 0.12s 65.48t Elapsed: 00:00:04
Start: Tue May 21 00:30:56 2013 End: Tue May 21 00:31:00 2013
WARNINGS ISSUED: 2