BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048746
(755 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/711 (66%), Positives = 578/711 (81%), Gaps = 10/711 (1%)
Query: 51 NPFAEQEAWEEHQMGKA-SLKYGSKNKN---QSNDYEYVFEDKIDFIRDSVI-DGENLDE 105
NP EQ+ WE+++M A S G N + +YEYVFED+I+FI++ V+ G+ D
Sbjct: 385 NP--EQKEWEQNRMKSAISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQGQKGDG 442
Query: 106 LHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQ 165
+ P A +QE RK+LP+YPYR++L+ AV EYQVL+IVGETGSGKTTQIPQ
Sbjct: 443 VMILKPGDDGSAQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQ 502
Query: 166 YLHEAGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKY 225
YLHEAG++K GK+GCTQPRRVAAMSVAARV++E+G KLG+EVGYSIRFEDCTS+KT+L+Y
Sbjct: 503 YLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQY 562
Query: 226 MTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATL 285
MTDGML+RE L+ P+L SYSVL++DEAHERTL TDILFGLLKD+ +FR DLKLLISSAT+
Sbjct: 563 MTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATM 622
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFL 345
DAE+FSDYF AP F IPGR+Y V HYT+APEADY+DAA+VTVLQIH+T+ GDILVFL
Sbjct: 623 DAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFL 682
Query: 346 TGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATN 405
TGQEE++ A E+L+ RTRGLG+KI ELII IY+ LPT+LQAKIFEPTP ARKVVLATN
Sbjct: 683 TGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATN 742
Query: 406 IAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCF 465
IAETSLTIDGI YVIDPGF K K +NPRTGMESL++ P+S+ASA QR GR+GR PGKCF
Sbjct: 743 IAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCF 802
Query: 466 RLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALEL 525
RL+T + ++++NT+PEIQRTNL NVVL+LKS+GI+DL+NFDF+DPPP + L+ ALE
Sbjct: 803 RLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQ 862
Query: 526 LFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFY 585
L+AL ALN G+LTK+GR+MAEFP+DP LSKMI+AS+K KCS+EI+TI AMLSVGN+IFY
Sbjct: 863 LYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFY 922
Query: 586 RPKDKQVHADNAR-MNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARD 644
RPKDK AD AR + FH GDH+ L+ V+N WRE Y+ QWC+EN+IQ RSMKRA+D
Sbjct: 923 RPKDKAFAADAARKLFFHPQ--GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQD 980
Query: 645 IRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHP 704
+RDQLE LLERVEI + SN++D D+I+K I SGFF +SAKL+K+G + T KH Q V IHP
Sbjct: 981 VRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHP 1040
Query: 705 SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
SS L Q P+WVVYHELVLTTKE+MRQ+ E++ WL EIAPH Y+ KDV D
Sbjct: 1041 SSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND 1091
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/708 (64%), Positives = 575/708 (81%), Gaps = 10/708 (1%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G+
Sbjct: 322 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE----EP 377
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P S + E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 378 SAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 437
Query: 169 EAGYTKQG-KVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT +G K+ CTQPRRVAAMSVAARV++EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 438 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 497
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D
Sbjct: 498 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDT 557
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 558 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 617
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 618 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 677
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 678 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 737
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLF 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP E LL ALE L+
Sbjct: 738 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 797
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
AL ALN LGELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 798 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 857
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 858 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 916
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 917 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 975
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 976 LFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1023
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/708 (64%), Positives = 574/708 (81%), Gaps = 10/708 (1%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G
Sbjct: 325 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGNE----EP 380
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P S + E +Q R++LP++P+R+ELL A+ +QVL+I GETGSGKTTQIPQYL
Sbjct: 381 SAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 440
Query: 169 EAGYTKQG-KVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT +G K+ CTQPRRVAAMSVAARV++EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 441 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 500
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SAT+D
Sbjct: 501 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDT 560
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 561 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 620
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 621 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 680
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 681 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 740
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLF 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP E LL ALE L+
Sbjct: 741 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 800
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
AL ALN LGELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 801 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 860
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 861 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 919
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 920 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 978
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 979 LFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1026
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/708 (64%), Positives = 575/708 (81%), Gaps = 10/708 (1%)
Query: 52 PFAEQEAWEEHQMGKASLKYGSKNK-NQSNDYEYVFEDK--IDFIRDSVIDGENLDELHS 108
P EQ WEE ++G ASLK+G+++ +Q Y+ V E++ I+F+R + + G+
Sbjct: 326 PGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE----EP 381
Query: 109 ELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLH 168
P + E +Q R++LP++P+R+ELL AV +Q+L+I GETGSGKTTQIPQYL
Sbjct: 382 AAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLF 441
Query: 169 EAGYTKQG-KVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMT 227
E GYT++G K+ CTQPRRVAAMSVAARV++EMGVKLG+EVGYSIRFEDCTSE+T+L+YMT
Sbjct: 442 EEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 501
Query: 228 DGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDA 287
DGMLLRE LSEP+L SYSV+MVDEAHERTL TDILFGL+KD+ +FR +LK+L++SATLD
Sbjct: 502 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDT 561
Query: 288 EKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTG 347
+FS +F AP+F+IPGRR+PV+I YTKAPEADY++A +V+VLQIHVTQ PGDILVFLTG
Sbjct: 562 ARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTG 621
Query: 348 QEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
QEEIE A E+L+ R R LGSKI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIA
Sbjct: 622 QEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIA 681
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTI+GI YV+DPGF K KSYNPRTGMESL V P SKASA QRAGR+GR GKCFRL
Sbjct: 682 ETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRL 741
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLF 527
YT Y ++++ TVPEIQRT+L NVVL+LKSLGI DL++FDF+DPPP E LL ALE L+
Sbjct: 742 YTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLY 801
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
AL ALN LGELT GR+MAE P+DPMLSKMI+AS+K CS+EI+T+AAMLSV NSIFYRP
Sbjct: 802 ALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
KDK VHADNAR+NF L GDH+ LL VY W E YS+QWCYEN++Q RSM+RARD+R+
Sbjct: 862 KDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVRE 920
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QLEGLLERVE+ ++S D ++KAIT+G+F H+A+L ++G Y TVK Q V IHP+S
Sbjct: 921 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 979
Query: 708 LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + PRW++YHELVLTTKE+MRQV E++ WL+E+APHYY+ K++ED
Sbjct: 980 LFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELED 1027
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/736 (61%), Positives = 575/736 (78%), Gaps = 24/736 (3%)
Query: 36 VSLQRYNLDSAGDK-------------MNPFAEQEAWEEHQMGKASLKYGSKN-KNQSND 81
+ ++RY+L A K P + WEE Q+ + L G+K+ K + +
Sbjct: 262 MKMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQE 321
Query: 82 YEYVFEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQ 141
+E + ++K+DFI+ + G N + + +E K+K ++E E RK+LP+Y +RD ++
Sbjct: 322 FELLLDEKVDFIQALQMPGTNEEVVETEA---EKKKMSIE---ETRKSLPVYAFRDAFIE 375
Query: 142 AVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQPRRVAAMSVAARVSQEMG 200
AV E+QVL+I GETGSGKTTQ+PQYL+EAG+ + GK +GCTQPRRVAAMSVAARV+ E+G
Sbjct: 376 AVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVG 435
Query: 201 VKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTD 260
KLG +VGYSIRFEDCTSEKT+LKYMTDGMLLRE L+EP+L SYSV+M+DEAHERTL TD
Sbjct: 436 CKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTD 495
Query: 261 ILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEAD 320
ILFGL+KD+ +FR DLKLLISSATLDAEKFS +F APIF+IPGRR+PV+I+YT+APEAD
Sbjct: 496 ILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEAD 555
Query: 321 YIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYA 379
Y+DAAIVT++QIH+TQ PGDILVFLTGQEEIET E L R++ LGSKI ELI P+YA
Sbjct: 556 YVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYA 615
Query: 380 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESL 439
NLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVIDPGFSK S++ R+G+E L
Sbjct: 616 NLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHL 675
Query: 440 LVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKS 499
V ISKA+A QRAGR+GRTGPGKCFRLYT Y ++++ +PEIQRTNL NVVL+LKS
Sbjct: 676 HVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKS 735
Query: 500 LGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIV 559
LGI DLV+FDF+DPPP+E L+ ALE L+AL ALN GELTK+GRRMAEFP DP +SKMI+
Sbjct: 736 LGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMII 795
Query: 560 ASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
AS+K +CS+EI+TIAAMLS ++FYRPK + +HAD+AR F GDHI L+ VYN W
Sbjct: 796 ASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGF-WSPAGDHITLMNVYNKW 854
Query: 620 RECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFF 679
+E ++S +WC ENY+Q R+MKRARD+RDQL GLLERVEIE S+ D I+KAIT+G+F
Sbjct: 855 QESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYF 913
Query: 680 PHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEW 739
+ +KL G Y TVKH H HP+S L + PRWVVY ELV T+KE+MR+++E++ W
Sbjct: 914 YNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGW 973
Query: 740 LVEIAPHYYQLKDVED 755
L+E+APHYY+ +++ED
Sbjct: 974 LLEVAPHYYKGRELED 989
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/758 (58%), Positives = 587/758 (77%), Gaps = 24/758 (3%)
Query: 12 KSLQYRIP-DAYDEEGHVNQEKRFAVSLQRYNLDSAGDKMN---PFAEQEAWEEHQMGKA 67
++ +Y++P D + E+G ++++++ V QRY + G++ AEQ+ WE Q+ KA
Sbjct: 298 QATEYQMPEDYFTEQGKLDRKRKEEVLYQRYKDSNEGEQNEVTMGAAEQQRWEAQQINKA 357
Query: 68 SLKYGSKNKNQ-----SNDYEYVFED--KIDFIRDSVIDGENLDELHSELPDKSKEKSAL 120
L ++N+ +++VF++ +IDF+ D+ + EN + ++ D EKS
Sbjct: 358 LLF----DQNEWLPPGEKQFDFVFDESQQIDFLLDTKLSAENPVDT-DKMTDVKVEKS-- 410
Query: 121 EMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK-QGKVG 179
L+ RK+LP+Y Y+D+LL+A+NEYQVL+IV ETGSGKTTQ+PQ+LHEAGYTK K+
Sbjct: 411 --LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKIC 468
Query: 180 CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQPRRVAAMSVAARV++EM V+LG EVGYSIRFE+ TSEKT++KY+TDGMLLRE L+EP
Sbjct: 469 CTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEP 528
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L SYSV+++DEAHERTL TDILFGL+KD+ +FR DLK+LISSAT+DAEKFS YF AP+
Sbjct: 529 DLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPV 588
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
F +PGRRYPV+I+YT PEA+YI AAI T+LQIH TQ GDILVFLTGQ+EIE E ++
Sbjct: 589 FYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQ 648
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
R LG +I E+I+CPIYANLP+ELQAKIF+PTP GARKVVLATNIAETS+TIDG+ +V
Sbjct: 649 ELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFV 708
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
ID GF K YNPRTGMESL+ P S+ASA QRAGR+GR GPGKCFRLYT Y+ ++D
Sbjct: 709 IDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDM 768
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELT 539
T PEIQRTNL N+VL+LKSLGI++L++FDF+D PP E L+++LELL+AL ALN GELT
Sbjct: 769 VTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELT 828
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARM 599
K+GR+MAEFP DPMLSK ++AS K C +E+++I +ML +S+FYRPKDK + AD AR
Sbjct: 829 KLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARA 888
Query: 600 NFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIE 659
NF GDH+ LL ++N W + ++S W EN++Q +S+ RARD+RDQL L ERVEIE
Sbjct: 889 NFTQPG-GDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIE 947
Query: 660 VTSNLND-LDAIKKAITSGFFPHSAKLQKNG-SYWTVKHPQRVHIHPSSGLAQVLPRWVV 717
+ +N ++ LD IKKAIT+G+F ++A+L ++G SY TVK Q V+IHPSS +A+ P+ ++
Sbjct: 948 LVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVII 1007
Query: 718 YHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
Y ELVLTTKEY RQ+TE++PEWL+EI+PHY++ +++E+
Sbjct: 1008 YFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEE 1045
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/636 (58%), Positives = 506/636 (79%), Gaps = 2/636 (0%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
K+ ++E+R++LPI+P R+ LQAV+E+Q+LV++GETGSGKTTQ+ QYL EAGY +G
Sbjct: 495 KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554
Query: 177 KVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
K+GCTQPRRVAAMSV+ RV++E G +LG EVGY+IRFEDCTS +TI+K+MTDG+LLRE L
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+PNL +YSV+++DEAHERT+STD+LFGLLK ++ R +LK+LI+SATL+AEKFS YF +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
A +F IPGR +PV+I YTK PEADY+DA+++TV+QIH+++ PGDIL+FLTGQEEI+ A +
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
IL R + LGS + +LII P+Y+ LP+E+Q KIFEP P G+RKVV+ATNIAETSLTIDGI
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGI 794
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YVIDPGFSK K +NP+ GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT + +
Sbjct: 795 YYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNE 854
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLG 536
M +++PEIQRTNL N VL +K++GI+DL+NFDF+DPPP + L+ A+E L++L AL++ G
Sbjct: 855 MLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEG 914
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
LT++GR+MAEFPLDP LSKM++AS CSDEI+T+ AMLSV N +FYRPK+KQ AD
Sbjct: 915 LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQ 973
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ F GDH+ LL VY SW+ +S WC+EN++Q RS++RA+D+R QL +++R
Sbjct: 974 KKAKFFQPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRY 1032
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
++++ S + I+KAI SGFF +++K N Y T+ Q V+IHPSS L P WV
Sbjct: 1033 KLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWV 1092
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
+YHELV+TTKEYMR+V + P+WLVE+AP +++ D
Sbjct: 1093 IYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/637 (60%), Positives = 497/637 (78%), Gaps = 3/637 (0%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 552 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 610
Query: 176 GKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQPRRVAAMSVA RVS+E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 611 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 670
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 671 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 730
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 731 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 791 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 850
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 851 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 910
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKL 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP E L+ A+E L+ L AL+
Sbjct: 911 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 971 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1029
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1030 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1088
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1089 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1148
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1149 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/637 (60%), Positives = 497/637 (78%), Gaps = 3/637 (0%)
Query: 116 EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ 175
+K+ + +L E+R++LPIY +++L+QAV++ Q+L+++GETGSGKTTQI QYL EAGYT +
Sbjct: 576 KKTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR 634
Query: 176 GKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREI 235
GK+GCTQPRRVAAMSVA RVS+E G LG EVGY+IRFEDCTS +T++KYMTDGMLLRE
Sbjct: 635 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLREC 694
Query: 236 LSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG 295
L +P+L Y+++M+DEAHERT+ TD+LFGLLK ++ R D+KL+++SATLDA KFS YF
Sbjct: 695 LIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFY 754
Query: 296 SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETAD 355
APIF IPGR YPVEI YTK PE DY+DA+++TV+QIH+T+ PGDILVFLTGQEEI+TA
Sbjct: 755 EAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 814
Query: 356 EILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDG 415
EIL R + LG + ELII P+Y+ LP+E+Q +IF+P P G+RKVV+ATNIAETSLTIDG
Sbjct: 815 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDG 874
Query: 416 IKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHK 475
I YV+DPGF K K YN +TG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT Y
Sbjct: 875 IYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRD 934
Query: 476 DMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKL 535
+M VPEIQRTNLA+ VL LK++GI+DL++FDF+D PP E L+ A+E L+ L AL+
Sbjct: 935 EMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 994
Query: 536 GELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHAD 595
G LT++GRRMAEFPL+PML KM++ S CS+E++TI +MLSV N +FYRPKDKQ AD
Sbjct: 995 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1053
Query: 596 NARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLER 655
+ FH GDH+ LL VYNSW+ +S WCYEN+IQ RS++RA+DIR Q+ G+++R
Sbjct: 1054 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1112
Query: 656 VEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRW 715
+++V S ++KAI SGFF ++AK Y T+ Q V+IHPSS L P W
Sbjct: 1113 HKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEW 1172
Query: 716 VVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VVYHELVLTTKEYMR+VT + P WLVE AP ++++ D
Sbjct: 1173 VVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/630 (59%), Positives = 494/630 (78%), Gaps = 2/630 (0%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+QE+R++LPIY + EL+QAV++ QVLV++GETGSGKTTQ+ QYL EAGYT +GK+GCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 183 PRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
PRRVAAMSVA RV++E G +LG EVGY+IRFEDCT T++KYMTDGMLLREIL + NL
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YSV+M+DEAHERT+ TD+LFGLLK L+K R DL+L+++SATLDAEKFS YF + IF I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PGR +PVEI YTK PE DY+DAA++TVLQIH+T+ GDILVFLTGQEEI++A + L R
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+GLG + ELII P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF+K YNP+ G+ESL++ PIS+ASA QRAGR+GRTGPGKC+RLYT Y +M ++
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVG 542
PEIQR NL L +K++GI+DL++FDF+DPP +AL+ A+E L++L AL++ G LTK+G
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
R+MAEFPL+P LSKM++AS CSDEI+T+ AM+ GN IFYRP++KQ AD R F
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
GDH+ LL VY +W+ N+S WC+EN+IQ RS++RA+D+R QL ++++ +++V +
Sbjct: 987 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1045
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+ I+KAIT+GFF H A+ Y T+ Q V+IHPSS L Q P WV+YH+LV
Sbjct: 1046 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1105
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
+TTKEYMR+VT + P+WLVE+AP ++++ D
Sbjct: 1106 MTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/636 (58%), Positives = 498/636 (78%), Gaps = 3/636 (0%)
Query: 117 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 176
++ L M+ E+R++LPI+ + L++A+ + Q+LV+VGETGSGKTTQ+ QY EAG ++G
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 177 KVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREIL 236
K+GCTQPRRVAAMSVA RV++E G KLG +VGY+IRFEDCTS+ TI+KYMTDGMLLRE L
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 237 SEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGS 296
+P+L YS++M+DEAHERT+ TD+LFGLLK + R +LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 297 APIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADE 356
APIF IPGR +PVEI YT+ PE+DY++AA +TV+QIH+T+ PGD+LVFLTGQEEI+T+ E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 416
+L R + +G + ELII P+Y LP+E+Q +IF+P P G RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 417 KYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKD 476
YV+DPGF K K YNP++GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT + +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 477 MDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLG 536
M VPEIQRTNLA+ +L LK++GI++L++FDF+D PP ++++ AL L LSAL+ G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 537 ELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADN 596
LTK+GRRMAEFPL+P LSK+++ S CS+E++TI AML+V N IFYRPK+KQ HAD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 597 ARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV 656
+ FH GDH+ LL VYNSW+ ++S WC+EN+IQVRSMKRA+DIR QL G+++R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRH 1064
Query: 657 EIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
++ + S D+ ++KAI SGFF ++AK Y T+ Q V+IHPSS Q P WV
Sbjct: 1065 KLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWV 1124
Query: 717 VYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
VYHELV+TTKEYMR+VT + P+WLVE AP ++++ D
Sbjct: 1125 VYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/632 (54%), Positives = 476/632 (75%), Gaps = 2/632 (0%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
+ +R+TLP+Y R EL+QAV + Q LVIVGETGSGKTTQI QYL E G++ G +GCTQ
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQ 535
Query: 183 PRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
PRRVAA+SVA RV++E+G K+GH+VGY+IRFED T T +KYMTDGML RE L +P +
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKI 302
YSV+M+DEAHERT++TD+LF LLK R +LK++++SATL++ KFS+YF + PI I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 303 PGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRT 362
PG+ +PVE+ Y++ P+ DYI+AA+ V+ IH+ + PGDILVFLTGQEEI++ EIL R
Sbjct: 656 PGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
+ LG I EL+I P+Y+ LP+E+Q+KIFEPTP+G+RKVV ATNIAETS+TIDGI YV+DP
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF+K+ YN R G+E L+V PIS+A A QR GR+GRTGPGKC+RLYT ++ +M +NTV
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVG 542
PEIQR NL++ +L+LK++GI+DL+ FDF+DPPP+ +L AL L+ L +L+ G+LT +G
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLG 895
Query: 543 RRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFH 602
+ M+ FP+DP LS+ +++S ++CSDEI+TI +MLSV N +FYRPKD+Q+ AD+ + FH
Sbjct: 896 KEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSKKAKFH 954
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVTS 662
GDH+ LL VY W++ NYS Q+C N++ R +KRARD++ Q+ + +++ +++ S
Sbjct: 955 -HPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLIS 1013
Query: 663 NLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELV 722
+D D I+K SGFF ++AK Y T+ V IHPSS L +V+YH +V
Sbjct: 1014 CHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIV 1073
Query: 723 LTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
LT++EYM QVT ++P+WL+E+APH+Y+ D E
Sbjct: 1074 LTSREYMSQVTSIEPQWLLEVAPHFYKAGDAE 1105
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/633 (55%), Positives = 475/633 (75%), Gaps = 4/633 (0%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCT 181
++E+R+ LP++ R + L+AV++ Q+LV++GETGSGKTTQI QYL E GYT K +GCT
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRRVAAMSVA RV++E+G ++G EVGY+IRFED TS T +KYMTDGML RE L +P L
Sbjct: 563 QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
YSV+++DEAHERT++TD+LFGLLK + R DLKL+++SATLDAE+FS YF PIF
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
IPGR YPVEI YTK PEADY+DAA++TV+QIH+++ PGDILVFLTGQEEI+T+ EIL R
Sbjct: 683 IPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYER 742
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
++ LG I EL+I P+Y+ LP+E+Q++IFEP P G RKVV+ATNIAETSLTIDGI YV+D
Sbjct: 743 SKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGF K ++P+ GM+SL+V PIS+A A QR+GR+GRTGPGKC+RLYT Y +M +
Sbjct: 803 PGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSP 862
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKV 541
+PEIQR NL++ +L+LK++GI+DL+NFDF+DPPP + ++ AL+ L+ALSAL+ G LT +
Sbjct: 863 IPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPL 922
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
GR+MA+FP++P LSK+++ S + CS+E+++I AMLSV N I+ RP++KQ AD R F
Sbjct: 923 GRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQRAQF 981
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
DH+ LL VY +W+ S WCYE+YIQ R M+RA D+R QL L++R V
Sbjct: 982 A-NPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVV 1040
Query: 662 SNLNDLDAIKKAITSGFFPHSAKLQKN-GSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHE 720
S + I +A+ SG+F + AK + G Y T+ V++HPS L WV+YHE
Sbjct: 1041 SCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHE 1100
Query: 721 LVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDV 753
L+ T+KEYM V+ + P+WLVE+AP +++ +
Sbjct: 1101 LIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANA 1133
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/658 (53%), Positives = 482/658 (73%), Gaps = 23/658 (3%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA-- 170
K+ + E+L E+R+ LP++ +D+ L +N Q L++VGETGSGKTTQIPQ++ +A
Sbjct: 49 KAYSQRYFEIL-EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVV 107
Query: 171 -GYTKQGK---VGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYM 226
+ +G+ VGCTQPRRVAAMSV+ RV+ EM V +G EVGYSIRFEDCTS +T+LKY+
Sbjct: 108 ADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYL 167
Query: 227 TDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLD 286
TDGMLLRE +++P LE Y V+++DEAHERTL+TD+LFGLLK++++ R DLKL++ SATL+
Sbjct: 168 TDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLE 227
Query: 287 AEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLT 346
AEKF +YF AP+ K+PGR +PVEI YT+ PE DY++AAI TV+QIH+ + PGDILVFLT
Sbjct: 228 AEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLT 287
Query: 347 GQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EG---ARK 399
G+EEIE A + LG ++ + + P+Y+ LP +Q KIF+P P EG RK
Sbjct: 288 GEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRK 347
Query: 400 VVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRT 459
+V++TNIAETSLTIDGI YVIDPGF+K K YNPR +ESLLV PISKASA QR+GR+GRT
Sbjct: 348 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRT 407
Query: 460 GPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEAL 519
PGKCFRLYT +++ D+ T PEI R+NLAN VL LK LGIDDLV+FDF+DPP E L
Sbjct: 408 RPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL 467
Query: 520 LKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSV 579
++ALE+L L AL+ G LTK G M+EFPLDP +SKM++ S + CS+EI++++AMLSV
Sbjct: 468 MRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSV 527
Query: 580 GNSIFYRPKDKQVHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRS 638
N F RP++ Q AD A+ F G++ GDH+ LL VY+++++ N WC+EN++ R+
Sbjct: 528 PNC-FVRPREAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 639 MKRARDIRDQLEGLLERVEIEVTS-NLNDLD---AIKKAITSGFFPHSAKLQKNGSYWTV 694
MK A ++R QL ++ R +++ S + N D I+KA+ +G+F A L++ G Y TV
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTV 644
Query: 695 KHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
K Q VH+HPS+ L P WV+Y+E VLTT+ ++R VT+++ EWLV++A HYY L +
Sbjct: 645 KDNQVVHLHPSNCLDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN 701
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/641 (52%), Positives = 475/641 (74%), Gaps = 11/641 (1%)
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 520 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 575
Query: 174 KQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQPRRVAAMSVA RVS+EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 576 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLR 635
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 636 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASF 695
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 696 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 755
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 756 TSDQIVEH-LEELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 813
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 814 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 873
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPPE+ +L ++ L+ L AL
Sbjct: 874 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 933
Query: 533 NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
+ G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 934 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV-PAIFYRPKGREE 992
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH++ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 993 ESDQIREKFAVPE-SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1051
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1052 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1111
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1112 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1152
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/641 (52%), Positives = 474/641 (73%), Gaps = 11/641 (1%)
Query: 114 SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT 173
+K+KS LE +R+ LPI+ + ELL + + ++++VGETGSGKTTQ+ QYLHE GYT
Sbjct: 520 AKKKSILE----QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT 575
Query: 174 KQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 233
G +GCTQPRRVAAMSVA RVS+EMG LG EVGY+IRFEDCTSE T++KYMTDG+LLR
Sbjct: 576 DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLR 635
Query: 234 EILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDY 293
E L E +L+ YS +++DEAHER+L+TD+LFGLL++++ RSDLKL+++SAT+DAEKF+ +
Sbjct: 636 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAF 695
Query: 294 FGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE- 352
FG+ PIF IPGR +PV+I ++K P+ DY++AA+ LQ+H++ +PGDIL+F+ GQE+IE
Sbjct: 696 FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEV 755
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
T+D+I++H L + A L + PIY+ LP++LQAKIF+ P+G RK ++ATNIAETSLT
Sbjct: 756 TSDQIVEH-LEELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLT 813
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+DGI +VID G+ K+K +NPR GM++L ++PIS+A+A QR+GR+GRTGPG+CFRLYT
Sbjct: 814 VDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSA 873
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL 532
Y ++ TVPEIQRTNLANVVL+LKSLG+ DL+ F F+DPPPE+ +L ++ L+ L AL
Sbjct: 874 YKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAL 933
Query: 533 NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
+ G LT GR M EFPLDP LSKM++ S CS EI+ I +MLSV +IFYRPK ++
Sbjct: 934 DNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV-PAIFYRPKGREE 992
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D R F + DH+ L VY W+ NYST WC +++I ++M++ R++R QL+ +
Sbjct: 993 ESDQIREKFAVPE-SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1051
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + + + S D D ++K I + +F +AKL+ G Y ++ H+HP+S L +
Sbjct: 1052 MVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMG 1111
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
P ++VYHELV+TTKEYM+ VT + EWL E+ P +Y +K
Sbjct: 1112 YTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1152
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/633 (50%), Positives = 468/633 (73%), Gaps = 6/633 (0%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQ 182
++++R+ LP++ R +++ + E V++IVGETGSGKTTQ+ QYL E G+ G +GCTQ
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQ 493
Query: 183 PRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLE 242
PRRVAAMSVA RV+ EMGV LG +VGY+IRFEDCTSEKTI+KYMTDG+LLRE L + +L+
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 243 SYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG-SAPIFK 301
YS +++DEAHER+L+TD+LFGLL+++I R+DLKL+++SAT+DA+KF+D+FG + P F
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHR 361
IPGR +PVE+ + + P DY+DAA+ + IH+ GDIL+F+ GQE+IE E++K +
Sbjct: 614 IPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEK 673
Query: 362 TRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 421
G + L + PIY+ LP++LQAKIF+ P G RK ++ATNIAETSLT+DGI +VID
Sbjct: 674 L-GELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVID 732
Query: 422 PGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNT 481
PGF K+K YNPR GM++L + P+S+ASA QR GR+GRTGPG+C+RLYT + ++ +T
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKST 792
Query: 482 VPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKV 541
VPEIQRTNLANVVL+LKSLG+DDL+ F F+D PP++ +L ++ L+ L AL+ G+LT +
Sbjct: 793 VPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPM 852
Query: 542 GRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF 601
GR+M EFPLDP LSKM++ S + CSDE++TI +MLSV +IF+RPK ++ AD + F
Sbjct: 853 GRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSV-PAIFFRPKGREEEADAKKEKF 911
Query: 602 HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT 661
+ DH+ L VY WR YS +WC +NY+ V+++K+ R++R QL+ +++ +++ +
Sbjct: 912 QVPE-SDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLI 970
Query: 662 SNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYH 719
SN ++ D ++K I S +F ++A+L+ G Y V+ +HP+S L + +P +VVYH
Sbjct: 971 SNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYH 1030
Query: 720 ELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
EL++T KEYM+ VT + WL E+ P +Y +K+
Sbjct: 1031 ELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKE 1063
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/643 (54%), Positives = 464/643 (72%), Gaps = 19/643 (2%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK---VGCT 181
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ+ E + G V CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRRVAAMSVA RV+ EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
E Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILKH 360
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 361 RTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTID 414
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
G+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNK 534
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP E L++ALELL L+ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 535 LGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 595 DNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL ++
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 654 ERVEI-EVTSNLNDLD---AIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLA 709
+R + +++ D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 728
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 729 HK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/643 (54%), Positives = 464/643 (72%), Gaps = 19/643 (2%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK---VGCT 181
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ+ E + G V CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRRVAAMSVA RV+ EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
E Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILKH 360
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 361 RTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTID 414
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
G+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNK 534
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP E L++ALELL L+ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 535 LGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 595 DNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL ++
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 654 ERVEI-EVTSNLNDLD---AIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLA 709
+R + +++ D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 728
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 729 HK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/643 (54%), Positives = 464/643 (72%), Gaps = 19/643 (2%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK---VGCT 181
++R LP++ Y+D + +Q V+VGETGSGKTTQIPQ+ E + G V CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRRVAAMSVA RV+ EM V LG EVGYSIRFEDC+S KTILKYMTDGMLLRE +++P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFK 301
E Y V+++DEAHERTL+TDIL G+LK++++ RSDLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 302 IPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP-GDILVFLTGQEEIETADEILKH 360
IPGR +PVEI YT PE DY++AAI TV+QIH+ + GD+L+FLTGQEEI+ A + +K
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 361 RTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA--RKVVLATNIAETSLTID 414
LG ++ ++ I P+Y+ LP + Q +IFEP P GA RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 415 GIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYH 474
G+ +VIDPGF+K K YNPR +ESLLV ISKASA QRAGR+GRT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 475 KDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNK 534
+M DNT PEI R+NL +VVL LK LGIDDLV+FDF+DPP E L++ALELL L+ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 535 LGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHA 594
G+LT++G MAEFPLDP L+KM++AS CS+E+++I AMLSV F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 595 DNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 653
D A+M F H+ GDH+ LL VY+++++ + S QWCY+N+I RS+ A ++R QL ++
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 654 ERVEI-EVTSNLNDLD---AIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLA 709
+R + +++ D I+KA+ +G+F A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 728
Query: 710 QVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
P WV+Y+E VLTTK Y+R T++KPEWLV+IAP YY + +
Sbjct: 729 HK-PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/642 (51%), Positives = 466/642 (72%), Gaps = 6/642 (0%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
K E + + +E+R+ LP + R++LL + + QVL++VGETGSGKTTQ+ Q+L+E GY
Sbjct: 475 KDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGY 534
Query: 173 TKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 232
+ G +GCTQPRRVAAMSVA RVS+EMGV+LG VGYSIRFED T T++KYMTDG+LL
Sbjct: 535 HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLL 594
Query: 233 REILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSD 292
RE L + NLE YSV+++DEAHER+L+TDIL GLLK ++ R D+KLL++SAT++++KFSD
Sbjct: 595 RESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSD 654
Query: 293 YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIE 352
+FG AP F IPGR YPV+I + KAP +DY++AA+ VLQIH++Q GDILVF+TGQE+IE
Sbjct: 655 FFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIE 714
Query: 353 TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 412
EI+ R L L I PIY+ +P +LQAKIF+ G RKVV+ATNIAETSLT
Sbjct: 715 ATCEIIADRLNQL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLT 773
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+ GI YV+D G+ K+K YN + G+++L V PIS+A+A QRAGR+GRTGPG +RLYT
Sbjct: 774 VHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMA 833
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL 532
Y ++M + T+PEIQRTNL+N VLILKSLG++++ +FDF+D PP + L+ +L L+ L AL
Sbjct: 834 YIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGAL 893
Query: 533 NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
+ G+LT +G++M+ FP+DP LSK+I+ ++ KC++EIITI +MLSV S+FYRPK++
Sbjct: 894 DNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAE 952
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGL 652
+D AR F++ DH+ LL +Y W+ YS WC ++++ +++KRARDIR QL +
Sbjct: 953 ESDAAREKFNVPE-SDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEI 1011
Query: 653 LERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV- 711
+ + +I + S ++D D +++ + S +F +A + G Y ++ H+H +S L +
Sbjct: 1012 MSKQKISLES-VSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLG 1070
Query: 712 -LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKD 752
LP +V+YHELVLT+KEYM VT + P WL E YY +K+
Sbjct: 1071 YLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/653 (52%), Positives = 457/653 (69%), Gaps = 24/653 (3%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE--------AGYTK 174
+ E+R LP++ Y+++ ++ + Q + +VGETGSGKTTQIPQ+ E +
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 175 QGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 234
V CTQPRRVAAMSVA RV++EM V LG EVGYSIRFEDC SE+T+LKY TDGMLLRE
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 235 ILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF 294
++ P L+ Y VL++DEAHERTL+TDIL GL+K++++ R+D+K++I SATLDA KF YF
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF 248
Query: 295 GSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIH-VTQSPGDILVFLTGQEEIET 353
P+ +PGR +PVEI +T E DY++AAI TV+QIH V + GDIL+FLTGQEEIE
Sbjct: 249 EDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEE 308
Query: 354 ADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG------ARKVVLATNIA 407
A + + + LG+ L P+Y+ LP Q +IFEP P +RK V++TNIA
Sbjct: 309 ACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIA 368
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETSLTIDG+ +VIDPGFSK K YNPR +ESLLV PISKASAMQRAGR+GRT PGKCFRL
Sbjct: 369 ETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRL 428
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLF 527
YT Y +M D T PEI R+NL +VVL LK LG +DLV+FDF+DPP E L++ALELL
Sbjct: 429 YTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLN 488
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
L A+N GELT++G MAEFPLDP L+KM++ S + CS+EI++I AMLSV + RP
Sbjct: 489 YLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRP 547
Query: 588 KDKQVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
+ + AD A+ F H+ GDH+ LL VY+S+++ QWCY+N+I R+MK A +R
Sbjct: 548 NEMRTEADEAKARFAHID--GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVR 605
Query: 647 DQLEGLLERVEI-EVTSNLNDLD---AIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHI 702
QL ++++ + V+++ D I+KA+ +GFF A L+++G Y TVK Q V++
Sbjct: 606 TQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNL 665
Query: 703 HPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
HPS+ L P W +Y+E VLTTK ++R VT+++PEWL++IAP YY L + D
Sbjct: 666 HPSTVLDHK-PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPD 717
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/664 (51%), Positives = 466/664 (70%), Gaps = 30/664 (4%)
Query: 112 DKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL--HE 169
DK ++ ++L E R+ LP+Y R+E L+ +E Q++V VGETGSGKTTQIPQ++ E
Sbjct: 58 DKPFSQNYFKIL-ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDE 116
Query: 170 AGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDG 229
+ ++ CTQPRRVAAMSVA RV+ EM V LG EVGY+IRFEDC+ T+LKYMTDG
Sbjct: 117 LPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDG 176
Query: 230 MLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEK 289
MLLRE +++ L YS +++DEAHERTL+TDIL GL+K L R DLK+++ SATLDA+K
Sbjct: 177 MLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKK 236
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
F YF AP+ +PGR YPVEI+YT+ PE DY++AA+ TVLQIHV + PGDILVFLTG+E
Sbjct: 237 FQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEE 296
Query: 350 EIE--------TADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG----- 396
EIE AD++++ G L + P+Y +LP Q +IFEPTPE
Sbjct: 297 EIEDACRKITLEADDLVREGAAG------PLKVYPLYGSLPPNQQQRIFEPTPEDTKSGY 350
Query: 397 ARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRS 456
RKVV++TNIAETSLTIDGI YV+DPGFSK K YNPR +ESLLV PISKASA QRAGR+
Sbjct: 351 GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRA 410
Query: 457 GRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPE 516
GRT PGKCFRLYT + K++ + T PEI R+NL++ VL LK LGIDDLV+FD++DPP
Sbjct: 411 GRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAP 470
Query: 517 EALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAM 576
E +++ALE L L+ L+ G+LT +GR+ +EFPLDP L+ M++ S + CS+E++++ A+
Sbjct: 471 ETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTAL 530
Query: 577 LSVGNSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQV 636
LSV N +F RP + AD R F + GDH+ LL VY++++ + WC+ +++
Sbjct: 531 LSVPN-VFVRPNSARKLADEMRQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSH 588
Query: 637 RSMKRARDIRDQLEGLLERVEIEVTS----NLNDLDAIKKAITSGFFPHSAKLQKNG-SY 691
R++ A ++R QL +ER E+E+ S + N I++A+ SGFF AK NG +Y
Sbjct: 589 RALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNY 648
Query: 692 WTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
T+K Q V +HPS GL+ V P WVVY+E VLTTK ++R VT ++PEWL+E+AP+YY L
Sbjct: 649 VTMKDNQVVSLHPSCGLS-VTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLD 707
Query: 752 DVED 755
D ++
Sbjct: 708 DFDN 711
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/633 (52%), Positives = 463/633 (73%), Gaps = 14/633 (2%)
Query: 125 EERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCTQP 183
E+RK LP++ +++ ++ + E QV+++VGETGSGKTTQIPQ++ +AG + GK VG TQP
Sbjct: 72 EKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQP 131
Query: 184 RRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLES 243
RRVAA+SVA RVS+EM +LG EVGYSIRFE+ +S +T +KY+TDGMLLRE +S+P L
Sbjct: 132 RRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNK 191
Query: 244 YSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIP 303
Y V+++DEAHERTLSTDILFGL+KD++K R DLKL++ SATL+A KF YF +AP+ K+P
Sbjct: 192 YDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVP 251
Query: 304 GRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTR 363
GR +PVEI YT+ DY+++A+ TV+ IH + GDILVFLTG+EEIE ++ TR
Sbjct: 252 GRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETR 311
Query: 364 GLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPG 423
G + + P+Y++LP Q+KIF+ E RK +++TNIAETSLTIDGI +V+DPG
Sbjct: 312 ERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPG 367
Query: 424 FSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVP 483
FSK K+YNPR+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT + + M T P
Sbjct: 368 FSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHP 427
Query: 484 EIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGR 543
EI R+NLA+VVL L LG+ DLV+FDF+DPP + L++ALE+L L AL+ G+LT++G
Sbjct: 428 EILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGS 487
Query: 544 RMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNF-H 602
M+EFPLDP LSKM++ S + CS+EI+TIAAMLS N F RPKD ++ AD+A+ +F H
Sbjct: 488 IMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADSAKKSFDH 546
Query: 603 LGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIE-VT 661
GDH+ +L VY+S+++ WCY+N++ R++K+A +R QL +L R ++ V+
Sbjct: 547 FD--GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVS 604
Query: 662 SNLND---LDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVY 718
++N + IKK I +GFF AK +K Y+T+ Q V HPS+GL + P + +Y
Sbjct: 605 GDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTR-RPEFCIY 663
Query: 719 HELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
+E VLT++ Y+R +T++K +WL+E+AP Y++ K
Sbjct: 664 NEFVLTSENYIRTITDVKFDWLLELAPSYFKQK 696
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/653 (53%), Positives = 457/653 (69%), Gaps = 35/653 (5%)
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYL--HEAGYTKQGKVGCTQPR 184
R+ LP++ RDE L+ Q++V VGETGSGKTTQIPQ++ E + + +V CTQPR
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 185 RVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESY 244
RVAAMSVA RV++EM VKLG EVGYSIRFE+ TS KTILKYMTDGMLLRE + + +L Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 245 SVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPG 304
S +++DEAHERTL+TDIL GLLK ++K R DLK++I SATLDAEKF YF AP+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 305 RRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETA--------DE 356
R YPVE++YT + DY+D+AI TVLQIH T+ GDIL+FLTG++EIE A D+
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 357 ILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG-----ARKVVLATNIAETSL 411
++ R G G L + P+Y +LP Q +IFEP PE RKVV++TNIAETSL
Sbjct: 330 LV--REEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSL 383
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
TIDGI YV+DPGFSK K YNPR +ESLLV PISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 384 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 443
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSA 531
+ K++ + + PEI R+NL++ VL LK LGIDDLV+FDF+DPP E +++ALE L L+
Sbjct: 444 AFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLAC 503
Query: 532 LNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
L+ G LT +GR ++FPLDPML+ M++ S + +CS EI+TI AMLSV N +F RP +
Sbjct: 504 LDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDK 562
Query: 592 VHADNARMNFHLGNVGDHIALLRVYNSWRE---CNYST-QWCYENYIQVRSMKRARDIRD 647
AD+A+ N GDHI LL VY++++ Y +WC ++Y+ RS+ A +IR
Sbjct: 563 KRADDAK-NIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRS 621
Query: 648 QLEGLLERVEIEVTSNLND----LDAIKKAITSGFFPHSAKLQKNGS--YWTVKHPQRVH 701
QLE L+ R +E+ + + D I+KA+ SGFF AK +++G+ Y TVK Q V
Sbjct: 622 QLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVL 680
Query: 702 IHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVE 754
IHPS+ L WV+Y+E VLT+K Y+R VT ++PEWL+EIAP YY L + +
Sbjct: 681 IHPSTVLGHD-AEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQ 732
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/772 (46%), Positives = 489/772 (63%), Gaps = 61/772 (7%)
Query: 26 GHVNQEKRFAVSLQRYNLDSA-----GDKMNPFAEQEAWEEHQMGKASLKYGSKNKN--- 77
G E ++A S ++N++ +++ Q WEE Q+ A +
Sbjct: 106 GDSENETKYASSNSKFNVEVTHKIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDITL 165
Query: 78 -QSNDYEYVFEDKIDFIRDSVIDGENL-DELHSE--LPDKSKEKSALEM-------LQEE 126
S+ Y+YVF+ D++ID N D+L E L +++ ALE +QE
Sbjct: 166 EGSDKYDYVFDT------DAMIDYTNEEDDLLPEEKLQYEARLAQALETEEKRILTIQEA 219
Query: 127 RKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK--VGCTQPR 184
RK LP++ Y+DELLQ + + QVL+I+GETGSGKTTQ+PQYL E G+T QGK + TQPR
Sbjct: 220 RKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPR 279
Query: 185 RVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-EKTILKYMTDGMLLREILSEPNLES 243
RVAA SVAARV+ EM V LG EVGY IRFED T+ KT+LKYMTDGMLLRE L++ L
Sbjct: 280 RVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSK 339
Query: 244 YSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIP 303
YS +M+DEAHERTL+TDIL GLLKD++ R LKLLISSAT++A+KFS++F + PIF +P
Sbjct: 340 YSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVP 399
Query: 304 GRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDILVFLTGQEEIETADEILKHRT 362
GRRYPV+IHYT PEA+YI AAI T+ QIH TQS PGDILVFLTGQEEIE L+
Sbjct: 400 GRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIM 459
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
LGS+ ++II PIYANLP E Q KIF+PTPE RKVVLATNIAETSLTIDGI+YVIDP
Sbjct: 460 SKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDP 519
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
GF K SY P TGM LL P S+AS QRAGR+GR GPGKCFR++T +Y +++
Sbjct: 520 GFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPK 579
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVG 542
PEI RTNL+N VL+L SLG+ DL+ F +D P L K+LE L+ L ALN G +T++G
Sbjct: 580 PEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLG 639
Query: 543 RRMAEFPLDPMLSKMI-VASDKDKCS---DEIITIAAMLSVGNSIFYRPKDKQVHADNAR 598
+ M EFP +P +K++ A+ ++C +E +TI +ML S+F K + +
Sbjct: 640 KMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQKRDAAASVLSE 699
Query: 599 MNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQL------EGL 652
+ DHI L ++N WR +S WC ++ IQ ++M R R+IR+QL GL
Sbjct: 700 VE------SDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGL 753
Query: 653 LER---VEIEVTSNLNDLDA-IKKAITSGFFPHSAKLQKNGSYWTVKHPQ---RVHIHPS 705
+E+ +++ + ++A I + SGF + +L G Y T+ V +HP+
Sbjct: 754 VEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPT 812
Query: 706 SGL-------AQVLPRWVVYHELVLTTKEYMRQVTEL-KPEWLVEIAPHYYQ 749
S L AQ ++V+Y +L+LT+KE++R + K EWL+++ P ++
Sbjct: 813 SILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFK 864
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust.
Identities = 310/643 (48%), Positives = 452/643 (70%), Gaps = 19/643 (2%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QPRRVAA++VA RV++E G LGHEVGY IRF+DCT + T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----- 295
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDA+KF D+F
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 296 -----SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
+ I + GR +PV+I Y ++P DYI + + TV++IH T+ GDIL FLTGQEE
Sbjct: 227 DPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEE 286
Query: 351 IETADEILKHRTRGLGSKIAE--LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R L + L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR+ GKC+RLY
Sbjct: 347 TSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLY 406
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFA 528
T + K + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP +++++ALELL+A
Sbjct: 407 TEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 529 LSALNKLGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
L L+K LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ A F + GDH+ +L VY ++ + N ++QWC E+++ + + RA +R+
Sbjct: 525 PNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T++ +HIHP+S
Sbjct: 584 QLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASV 643
Query: 708 L-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 644 LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/643 (47%), Positives = 452/643 (70%), Gaps = 19/643 (2%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV-GCT 181
++++R+ LP++ R+ +L + YQ +VIVGETG GK+TQIPQYL EAG+T +G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLREILSEPN 240
QPRRVAA++VA RV++E G LGHEVGY IRF+DCT + T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 241 LESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFG----- 295
L YSV+M+DEAHERTL TDI GLLK + K R DL+L+++SATLDA+KF D+F
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 296 -----SAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEE 350
+ I + GR +PV+I Y ++P DYI + + TV++IH T+ GD+L FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 351 IETADEILKHRTRGLGSKIAE--LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
+ET +L + R L + L + P+YA LP+ Q K+FE RKV++ATN+AE
Sbjct: 287 VETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAE 346
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TI GI YVID GF K+++YNPRT +E L+V P+S+ASA QRAGR GR+ GKC+RLY
Sbjct: 347 TSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLY 406
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFA 528
T + K + +TVPE+QR+NLA V+L LK+LGID+++ F F+ PPP +++++ALELL+A
Sbjct: 407 TEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 529 LSALNKLGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
L L+K LT+ +G R+AEFPL+PM +KM++ S CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
+++ HA F + GDH+ +L +Y ++ + N ++WC E+++ + + RA +R+
Sbjct: 525 PNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 583
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL+ LL + ++ S+ D D + + I SGFF ++A+ G+Y T++ +HIHP+S
Sbjct: 584 QLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASV 643
Query: 708 L-AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 749
L A+ PRWV+Y+E++ T+K YMR VT ++ WL+E+APH+YQ
Sbjct: 644 LYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ 686
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 600 bits (1547), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/650 (49%), Positives = 457/650 (70%), Gaps = 19/650 (2%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTK-QGK-VGC 180
++ ++ LP++ R +LL + E QV+VI+GETGSGKTTQ+ QYL+E GY +GK +
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 181 TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCT-SEKTILKYMTDGMLLREILSEP 239
TQPRRVAA+SVA RV+ EM V LG EVGYSIRFED T SE T LK++TDG+LLRE L +
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L+ YS +++DEAHER+L+TDIL G K L+ R DLKL+I+SAT++A+KFS +FG+AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQ--SPGDILVFLTGQEEIETADEI 357
F IPGR +PV+ YT P DY++AA+ ++IH+ S GDIL+F+TGQE+IET +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 358 LKHR-----TRGLGS----KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
L+ + ++ G+ +I ++ I PIY+ LP +LQ KIF+ RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TSLTI GI+YVID G+SK+K YNP+ G++SL++ PISKA+A QR+GR+GRT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGI-DDLVNFDFIDPPPEEALLKALELLF 527
T + +DM T+PEIQRTNL+N +L+LKSL + D+L F FID PP + L +L L+
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
+ A++ G+LT +G +MA+FPL P LSK+++ + ++ CSDE++TI +MLSV +FYRP
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQ-VFYRP 821
Query: 588 KDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRD 647
K++Q AD AR F + DH+ LL V+ WR N+S+ WC ++++Q +S+ RARDIRD
Sbjct: 822 KERQKEADIARNKFFIAK-SDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRD 880
Query: 648 QLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
QL +L+ +I V S+ D D IKK I SGF +AK+ +Y +K V +HP+S
Sbjct: 881 QLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSA 940
Query: 708 LAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 755
L + LP +VVYHEL++T+KEY+ VT + P WL+E Y +K +++
Sbjct: 941 LHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 590 bits (1521), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/684 (44%), Positives = 450/684 (65%), Gaps = 14/684 (2%)
Query: 70 KYGSKNKNQSNDYEYV--FEDKIDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEER 127
+ SKN + + V E DF + V+ +N SK K LE +R
Sbjct: 38 RKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRKDILE----QR 93
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVA 187
K LPI+ D L Q + + +V+V+VGETGSGK+TQIPQ+L+E Y ++G V TQPRRVA
Sbjct: 94 KNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVA 153
Query: 188 AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
A+++A RV+ E G +LG +VGYSIRF+D TS+KT +KY+TDGMLLRE++++P L Y L
Sbjct: 154 AVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTL 213
Query: 248 MVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRY 307
++DEAHERTL TD+L G +K +IK R L+++I SATL+AE+FS++F A I I GR+Y
Sbjct: 214 ILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQY 273
Query: 308 PVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGS 367
PV+IHYT PE DY+DA + T+ Q+H PGDILVFLTGQ+EIE + ++K ++ L S
Sbjct: 274 PVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPS 333
Query: 368 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKV 427
+ ++ CP++A+LP E Q ++F P RKVVL+TNIAETS+TI GI+YVID G +K+
Sbjct: 334 NLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKI 393
Query: 428 KSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQR 487
K +N + G+ESL V PIS+++AMQR+GR+GR G+C+R+YT ++ K + T+PEI+R
Sbjct: 394 KQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKR 452
Query: 488 TNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAE 547
+L+ VL LK+ G +D++NF ++DPP +E LL+ALE L+++ AL+ G + +G +M+
Sbjct: 453 IDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSL 512
Query: 548 FPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNARMNFHLGNVG 607
PL P L++ ++A+ + C E+I + + LS +S+F P++K+ A AR+ F L + G
Sbjct: 513 IPLLPSLARAVLAAREHNCLSEVIDVVSCLST-DSMFLFPQEKRDEAIEARLKF-LHSEG 570
Query: 608 DHIALLRVYNSWRECNYST--QWCYENYIQVRSMKRARDIRDQLE--GLLERVEIEVTSN 663
D + L + E ++ + QWC +N+I R++K DIR QL L + E+ +
Sbjct: 571 DLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSPE 630
Query: 664 LNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVL 723
+N + + + SG+ ++A L +GSY T+ Q + IHPSS L ++YHELV
Sbjct: 631 VNS-ENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVF 689
Query: 724 TTKEYMRQVTELKPEWLVEIAPHY 747
TTK Y+R V+ ++ WL +APHY
Sbjct: 690 TTKSYVRGVSSIRSNWLNAVAPHY 713
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/651 (44%), Positives = 423/651 (64%), Gaps = 17/651 (2%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
P S + ALE+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYL+E
Sbjct: 49 PSASPYREALEL---QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 105
Query: 171 GYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
G ++QG + TQPRRVAA+S+A RVS E +LG VGY++RFED TSE T +K++TDGM
Sbjct: 106 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGM 165
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD-----LKLLISSATL 285
LLRE +S+ L YS +++DEAHERT+ TD+LFG++K K R + LK+++ SAT+
Sbjct: 166 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATM 225
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPG--DILV 343
D + FS YF AP+ + GR++P++I YTK P+ DY+ AA+V+V QIH ++P DILV
Sbjct: 226 DVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIH-QEAPASQDILV 284
Query: 344 FLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLA 403
FLTGQEEIE + + R L +++ P+YA+LP Q ++F+ P+G RKV+++
Sbjct: 285 FLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIIS 344
Query: 404 TNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGK 463
TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QR GR+GR G
Sbjct: 345 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGI 404
Query: 464 CFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFID-PPPE--EALL 520
C+RLYT + K + TVPEIQR NLA+V+L L ++ + +++ FDF+ P P+ EA +
Sbjct: 405 CYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAI 463
Query: 521 KALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVG 580
L+LL AL + LT +GR+MA FPL+P +K I+ S K C++EI+TI ++LSV
Sbjct: 464 AQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV- 522
Query: 581 NSIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMK 640
+S+ Y P ++ + R F + + GDHI LL +Y +++ + WC EN++ ++M
Sbjct: 523 DSVLYNPPARRDEVQSVRKKF-ISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNML 581
Query: 641 RARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRV 700
++R QL + ++ + + S+ D++++++ + F ++A+LQ +G+Y T Q V
Sbjct: 582 LVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPV 641
Query: 701 HIHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
IHPSS L P VVY L+ T K YMR + + EWL E AP Y++ K
Sbjct: 642 AIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/645 (43%), Positives = 422/645 (65%), Gaps = 24/645 (3%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGK-VGCT 181
+Q++R LPI+ R +L Y+ ++IVGETG GK+TQ+PQ+L EAG+ G+ + T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRRVA +++A RV++E LGH+VGY++RF+D + + T +K+MTDG+LLREIL++P L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYF------- 294
YS++M+DEAHER+ +TDIL GLL+ +I+ R+DL++++SSATLDAE F D+F
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 295 ---GSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEI 351
+A I + GR +PV +H+TK DY +A+ TV+ IH ++PGDILVFLTGQ+E+
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 352 ETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
E E L+ L L + P Y LP Q K F+ TP G RKVV+ATNIAE S+
Sbjct: 310 EDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
TI GI YVID G+ K+++ + G+E+L+ +SKASA QRAGR+GR PGKC+RLY
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSA 531
+ + + TVPEIQR +A+ +L LK+LG+ ++ F ++ PPP A++ LELL+AL A
Sbjct: 429 EFER-FAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGA 487
Query: 532 LNKLGELTK-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDK 590
+++ +LT +G +MAEFPL PM SK ++ S + CS E++TI AM+ + +F P +
Sbjct: 488 IDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYRQ 546
Query: 591 QVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ AD R F + GDH+ +L V+ + E S +WC ++++ R + RA ++R QL
Sbjct: 547 RHQADVIRKKFAVEE-GDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLV 605
Query: 651 GLLERVEIEVTSN---LNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSG 707
LL+R EIE S+ +N + I++ + +GFF +A+ G Y TVK +++ S
Sbjct: 606 RLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSS 665
Query: 708 L--AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
+ + P+WV++ E++ ++ +R VT ++PEWL E+APHYY+
Sbjct: 666 IMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEF 707
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 281/650 (43%), Positives = 419/650 (64%), Gaps = 15/650 (2%)
Query: 111 PDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEA 170
P S A+E+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYL+E
Sbjct: 58 PSASPYPEAVEL---QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 114
Query: 171 GYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
G ++QG + TQPRRVAA+S+A RVS E +LG VGY++RF+D TSE T +K++TDGM
Sbjct: 115 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGM 174
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD-----LKLLISSATL 285
LLRE +S+ L YS +++DEAHERT+ TD+LFG++K K R + LK+++ SAT+
Sbjct: 175 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATM 234
Query: 286 DAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHV-TQSPGDILVF 344
D + FS YF AP+ + GR++P+++ YTK P+ DY+ AA+V+V QIH S DILVF
Sbjct: 235 DVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVF 294
Query: 345 LTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLAT 404
LTGQEEIE + + + L +++ P+YA+LP Q ++F+ P+G RKV+++T
Sbjct: 295 LTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIIST 354
Query: 405 NIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKC 464
NIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QR GR+GR G C
Sbjct: 355 NIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGIC 414
Query: 465 FRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFID-PPPE--EALLK 521
+RLYT + K D TVPEIQR NLA+V+L L ++ + +++ FDF+ P P+ +A +
Sbjct: 415 YRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIA 473
Query: 522 ALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGN 581
L+LL AL + LT +GR+MA FPL+P +K I+ S K C++EI+TI ++LSV +
Sbjct: 474 QLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-D 532
Query: 582 SIFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKR 641
S+ + P ++ R F + + GDH+ LL +Y +++ + WC EN++ ++M
Sbjct: 533 SVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTL 591
Query: 642 ARDIRDQLEGLLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVH 701
++R QL + ++ + + S+ D++++++ + F +A+LQ +G+Y T Q V
Sbjct: 592 VAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVA 651
Query: 702 IHPSSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLK 751
IHPSS L P VVY EL+ T K YMR + + +WL E AP Y++ K
Sbjct: 652 IHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/687 (40%), Positives = 419/687 (60%), Gaps = 36/687 (5%)
Query: 99 DGENLDELHSELPDKSK-----EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE EL E P + EK T PI R +L+QAV + L++ G
Sbjct: 17 EGERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQPR+VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 274 S-----DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIIC 375
A + + IH+ + GDILVFLTGQ EIE + E+L + + + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
P Y ++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 496 ILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLS 555
LK L I D++ F ++DPP E +L+AL+ L+ A+++ G +T++G M EFPL P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD----KQVHADNARMNFHLGNVGDHIA 611
++ + C D ++ IAAMLSV N +F RP D K+ + + G D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQKHRELAAKAGGFNDFAT 555
Query: 612 LLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLND 666
L ++ + WC +++I R + A + QL L+ +++ + T
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 667 LDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVL 723
+ +++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++
Sbjct: 616 HEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLV 675
Query: 724 TTKEYMRQVTELKPEWLVEIAPHYYQL 750
TTK Y R V ++ EW+ ++ P ++L
Sbjct: 676 TTKVYARIVCPIRYEWVRDLLPKLHEL 702
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/687 (40%), Positives = 418/687 (60%), Gaps = 36/687 (5%)
Query: 99 DGENLDELHSELPDKSK-----EKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE EL E P + EK T PI R +L+QAV + L++ G
Sbjct: 17 EGERPIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQPR+VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 274 S-----DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIIC 375
A + + IH+ + GDILVFLTGQ EIE + E+L + + + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
P Y ++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + M D+ +PEI+RT+L +VVL
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVL 436
Query: 496 ILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLS 555
LK L I D++ F ++DPP E +L+AL+ L+ A+++ G +T++G M EFPL P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD----KQVHADNARMNFHLGNVGDHIA 611
++ + C D ++ IAAMLSV N +F RP D K+ + + G D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 612 LLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLND 666
L ++ + WC +++I R + A + QL L+ +++ + T
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 667 LDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVL 723
+ +++ + +G+F + A+ ++ T+ VHIHPSS L + + W+++HE+++
Sbjct: 616 HEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLV 675
Query: 724 TTKEYMRQVTELKPEWLVEIAPHYYQL 750
TTK Y R V ++ EW+ ++ P ++L
Sbjct: 676 TTKVYARIVCPIRYEWVRDLLPKLHEL 702
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/687 (39%), Positives = 418/687 (60%), Gaps = 36/687 (5%)
Query: 99 DGENLDELHSELPDK-----SKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVG 153
+GE +L E P +EK T PI R +++QAV + L++ G
Sbjct: 17 EGERSRDLQEERPSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTG 76
Query: 154 ETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRF 213
TGSGKTTQ+P+YL+EAG+++ G +G TQPR+VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 214 EDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFR 273
+DC+S++T +KYMTDG LL+ IL +PNL +SV+++DEAHERTL+TDILFGLLK L + +
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Query: 274 S-----DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTK--APE----ADYI 322
S LK+++ SAT++ K S +FG+ PIF IPGR YPV + P YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 323 DAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLG-------SKIAELIIC 375
A + + IH+ + GDILVFLTGQ EIE + E+L + + + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 376 PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTG 435
P Y ++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NPR G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 436 MESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVL 495
++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ +++ M D+ +PEI+RT+L +VVL
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 496 ILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLS 555
LK L I D++ F ++DPP E +L+AL+ L+ A+++ G +T++G M EFPL P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 556 KMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD----KQVHADNARMNFHLGNVGDHIA 611
++ + C D ++ IAAMLSV N +F RP D K+ + + G D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 612 LLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEV-----TSNLND 666
L ++ + WC +++I R + A + QL L+ +++ + T
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPK 615
Query: 667 LDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRVHIHPSSGLAQVLPR--WVVYHELVL 723
+ +++ + +G+F + A+ ++ T+ VHIHPSS L + + W+V+HE+++
Sbjct: 616 HEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIVFHEVLV 675
Query: 724 TTKEYMRQVTELKPEWLVEIAPHYYQL 750
TTK Y R V ++ EW+ ++ P ++
Sbjct: 676 TTKVYARIVCPIRYEWVRDLLPKLHEF 702
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/652 (40%), Positives = 408/652 (62%), Gaps = 31/652 (4%)
Query: 129 TLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAA 188
T PI R +++QAV + L++ G TGSGKTTQ+P+YL+EAG+++ G +G TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 189 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLM 248
+SVA RV++EM LG +VGY +RF+DC+S++T +KYMTDG LL+ IL +PNL +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 249 VDEAHERTLSTDILFGLLKDLIKFRS-----DLKLLISSATLDAEKFSDYFGSAPIFKIP 303
+DEAHERTL+TDILFGLLK L + +S LK+++ SAT++ K S +FG+ PIF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 304 GRRYPVEIHYTK--APE----ADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEI 357
GR YPV + P YI A + + IH+ + GDILVFLTGQ EIE + E+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 358 LKHRTRGLG-------SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETS 410
L + + + L+I P Y ++ T+ Q +IF P P G RK V++TNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 411 LTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTL 470
LTIDGI+YV+D GF K ++NPR G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 471 HNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALS 530
+++ M D+ +PEI+RT+L +VVL LK L I D++ F ++DPP E +L+AL+ L+
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 531 ALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKD- 589
A+++ G +T++G M EFPL P L+ ++ + C D ++ IAAMLSV N +F RP D
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDP 530
Query: 590 ---KQVHADNARMNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIR 646
K+ + + G D L ++ + WC +++I R + A +
Sbjct: 531 EYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVE 590
Query: 647 DQLEGLLERVEIEV-----TSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVK-HPQRV 700
QL L+ +++ + T + +++ + +G+F + A+ ++ T+ V
Sbjct: 591 AQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPV 650
Query: 701 HIHPSSGLAQVLPR--WVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQL 750
HIHPSS L + + W+++HE+++TTK Y R V ++ EW+ ++ P ++
Sbjct: 651 HIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEF 702
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/455 (56%), Positives = 333/455 (73%), Gaps = 12/455 (2%)
Query: 223 LKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISS 282
+KYMTDGMLLRE +++P LE Y V+++DEAHERT++TDIL GLLK++ K RSDLKL++ S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 283 ATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQS-PGDI 341
ATLDA KF YF +AP+ +PGR +PVEI YT PE DY++AAI TV+QIH+ + GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 342 LVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTP----EGA 397
L+FLTGQEEIE A + +K LG ++ +L P+Y+ LP +Q +IFE P GA
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGA 180
Query: 398 --RKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGR 455
RKVV++TNIAETSLTIDG+ +VIDPGF+K K YNPR +ESLLV PISKASA QR GR
Sbjct: 181 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGR 240
Query: 456 SGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPP 515
+GRT PGKCFRLYT Y +M DNT PEI R+NL VVL LK LGIDDLV+FDF+DPP
Sbjct: 241 AGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 300
Query: 516 EEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAA 575
E L++ALELL L AL+ G+LT++G MAEFPLDP L+KM++AS CS+EI+++ A
Sbjct: 301 PETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTA 360
Query: 576 MLSVGNSIFYRPKDKQVHADNARMNF-HLGNVGDHIALLRVYNSWRECNYSTQWCYENYI 634
MLSV F RP + + AD A+M F H+ GDH+ LL VY+++++ N QWCY+N+I
Sbjct: 361 MLSVPQC-FLRPNEAKKLADEAKMRFAHID--GDHLTLLNVYHAFKQNNEDPQWCYDNFI 417
Query: 635 QVRSMKRARDIRDQLEGLLERVEIEVTS-NLNDLD 668
Q RS+K A +R QL +++R ++ TS N N D
Sbjct: 418 QYRSLKSADSVRQQLARIMDRFALQRTSTNFNSKD 452
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/661 (39%), Positives = 402/661 (60%), Gaps = 33/661 (4%)
Query: 113 KSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGY 172
KS+ L+M R+TLP+Y ++ E++ + V V++GETGSGK+TQIPQ++ E Y
Sbjct: 68 KSRASDLLKM----RETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLY 123
Query: 173 --TKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGM 230
K G + TQPRRVAA+++A RV+QE G KLG +VGYS+RF++ T+ +T LKY+TDGM
Sbjct: 124 DTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGM 183
Query: 231 LLREILSEPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKF-RSDLKLLISSATLDAEK 289
LLRE++ +L YSV+++DEAHERT+ TD++ G LK LI+ R DL++++ SATL AEK
Sbjct: 184 LLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEK 243
Query: 290 FSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQE 349
FS++F +API + GR++ V+ +Y KAP D +DA I +QI+ + GDIL FL GQE
Sbjct: 244 FSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQE 303
Query: 350 EIETADEILKHRTRGLG--SKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIA 407
EI+ A I++ + + + + ++ P+YA LP Q+ +F P RKVV +TNIA
Sbjct: 304 EIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIA 363
Query: 408 ETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRL 467
ETS+TI G+K+V+D G KVK + + G+ +LL PIS+ASAMQR+GR+GR GK FRL
Sbjct: 364 ETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRL 423
Query: 468 YTLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLF 527
Y +Y K + + PEI R+++ + VL+LK G+DDL+N+ + + P +EA++ L+ L+
Sbjct: 424 YCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELY 482
Query: 528 ALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRP 587
L AL+ G++TK G++MA PL P LS +++ + + C ++I I + LSV N +
Sbjct: 483 ELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPS 542
Query: 588 KDKQVHADNARMNF-HLGN-VGDHIALLRVYN--------SWRECNYSTQWCYENYIQVR 637
+++ + R++ + G GD I L +++ S + WC I +R
Sbjct: 543 PEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIR 602
Query: 638 SMKRARDIRDQLEGLLERV----------EIEVTSNLNDLDAIKKAITSGFFPHSAKLQK 687
K +RDQL +R+ ++ + + I K +GF ++A
Sbjct: 603 GFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMP 662
Query: 688 NGSYWTVKHPQRVHIHPSSGL--AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAP 745
+ SY TV + + IHPSS L + P ++Y E V TTK Y R V+ ++ WL E+
Sbjct: 663 DRSYRTVSTGEPISIHPSSMLFMNKSCP-GIMYTEYVFTTKGYARNVSRIELSWLQEVVT 721
Query: 746 H 746
+
Sbjct: 722 N 722
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/625 (40%), Positives = 385/625 (61%), Gaps = 10/625 (1%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQ-GKVGCT 181
L ++K LPI YR++LL AV + Q+ +++G TG GKTTQIPQ+L+EAG+ Q G +GCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 182 QPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNL 241
QPRR+ A SV+ RVS E+ G GYSI+F+ SEKT +KYMTDG+LL EI +P L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 242 ESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI-- 299
E YS++++DE HERTLSTD+L G+LK +++ R+D +L++SSA++DA K S +FG +
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
I G+ +PVE + + P +Y+D+AI TV+ I+ T PGDILVFL+G++EIE + ++
Sbjct: 198 MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIE 257
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
L+ P++A L + Q ++F RKV+ +TNIAETS+TIDGI YV
Sbjct: 258 DSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYV 317
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
+D GF+K + YNP T L+ PISK+SA+QR+GR+GRT GK FRLYT Y M +
Sbjct: 318 VDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSL-MKE 376
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELT 539
+I +++ +VL LK LG+ +++ F F PP L+ ALE L+ L L++ G LT
Sbjct: 377 EFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLT 436
Query: 540 K-VGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNAR 598
+G +++ LD +SK ++ S++ C+ EI++IA++L+ G +FY P +
Sbjct: 437 DPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAG-EVFYNPTSSSKNDAFVA 495
Query: 599 MNFHLGNVGDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI 658
+ N GD I L V+ S+ QWC +NY+ +++++A DIR L L + I
Sbjct: 496 HSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSI 555
Query: 659 EVTSNL--NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWV 716
L +D I K + GF + A LQ +GSY T+ Q V + SS L + W+
Sbjct: 556 PTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWI 614
Query: 717 VYHELVLT-TKEYMRQVTELKPEWL 740
+Y V + T+ +++ +++++ WL
Sbjct: 615 MYSSAVESETQIFVKNISKIESFWL 639
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/635 (38%), Positives = 375/635 (59%), Gaps = 27/635 (4%)
Query: 128 KTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVA 187
++LP+ + E+ + ++E+QV+V+ GETGSGKTTQ+P+ E G+ G +G TQPRR+A
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIA 140
Query: 188 AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVL 247
A SVAAR+++E+ +LG VGY +RF D S+ T +K MTDG+LL EI ++ L YS L
Sbjct: 141 ARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL 200
Query: 248 MVDEAHERTLSTDILFGLLKDLI-KFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 306
++DEAHER+L+ D + G LK L+ + R DLKL+I+SAT+D E+FS +F +API ++ GR
Sbjct: 201 IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRT 260
Query: 307 YPVEIHYTKAPEADYID--AAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRG 364
YPVE+ Y E D D I+ + + GDIL+F+ G+ EI E L+ +
Sbjct: 261 YPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQKQN-- 318
Query: 365 LGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGF 424
+ I P++A L + Q KIF P+ G ++VLATN+AETSLT+ IKYVIDPG
Sbjct: 319 ----LKHTEILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGT 372
Query: 425 SKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPE 484
+++ Y+ RT ++ L + PIS+ASA QR GR GR G C RLY+ +++ + T PE
Sbjct: 373 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFN-SRPEFTDPE 431
Query: 485 IQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL----NKLGE--- 537
I RTNLA+V+L + +LG+DD+ F F+D P E + ++LL L A K GE
Sbjct: 432 ILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRL 491
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNA 597
LT+VGR++A+ P+DP L+KMI+++ C E++ I + LS+ + RP++KQ +D
Sbjct: 492 LTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDP-RERPQEKQQASDEK 550
Query: 598 RMNFHLGNVGDHIALLRVYNSWREC------NYSTQWCYENYIQVRSMKRARDIRDQLEG 651
F D +A L ++ +E N + C ++++ ++ +DI Q+
Sbjct: 551 HRRFA-DKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREWQDIYHQIRL 609
Query: 652 LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV 711
+ + + + S + I A+ SG H + + I P+S L +
Sbjct: 610 TVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKK 669
Query: 712 LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
P+WV+ ELV T+K + R V E++PEW+ +A H
Sbjct: 670 QPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEH 704
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/635 (37%), Positives = 369/635 (58%), Gaps = 29/635 (4%)
Query: 129 TLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVGCTQPRRVAA 188
LP+ + ++L+A+ ++QV+++ GETGSGKTTQ+P+ E G +G +G TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 189 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLM 248
+VA R+++E+ + G +GY +RF D S+ T++K MTDG+LL EI + L Y ++
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 249 VDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 308
+DEAHER+L+ D L G LK+L+ R DLK++I+SAT+D E+FS +F +API ++ GR YP
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 309 VEIHYTK-APEADYID----AAIVTVLQIHVTQSPGDILVFLTGQEEI-ETADEILKHRT 362
VE+ Y EAD + AI + +S GDIL+F++G+ EI +TAD + K
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNL 315
Query: 363 RGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 422
R I P+YA L Q ++F+ R++VLATN+AETSLT+ GIKYVIDP
Sbjct: 316 R-------HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDP 366
Query: 423 GFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTV 482
G +++ Y+ RT ++ L + PIS+ASA QR GR GR G C RLY+ ++ + T
Sbjct: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTD 425
Query: 483 PEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALN-----KLGE 537
PEI RTNLA+V+L + +LG+ D+ F F++ P + + + LL L A+ +
Sbjct: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485
Query: 538 LTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQVHADNA 597
LT +GR++++ P+DP L++M++ + K C E + I + LS+ + RP DKQ +D
Sbjct: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDEK 544
Query: 598 RMNFHLGNVGDHIALLRVYNSWRE------CNYSTQWCYENYIQVRSMKRARDIRDQLEG 651
FH D +A + ++N E N + C +Y+ ++ +DI QL
Sbjct: 545 HRRFH-DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603
Query: 652 LLERVEIEVTSNLNDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQV 711
+++ + I V S + I A+ +G H + +T R I P SGL +
Sbjct: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663
Query: 712 LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPH 746
P+WV+ ELV T++ + R + PEW+ +A H
Sbjct: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 379/651 (58%), Gaps = 32/651 (4%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVG 179
L +ER+ LPI+ + ++++ + QV+V+ G++ GK++Q+PQ+ E + + + G V
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 180 CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQ + A+ +A RV+ EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P
Sbjct: 115 CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 174
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L SY V+++D+ HER+L+TD+L GLLKD++ R +LKL+++ + L K S Y+G P+
Sbjct: 175 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPV 234
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
++ ++PVE+ Y + D ++ I + +IH + GD++VFL +++IE E++
Sbjct: 235 IEV-RNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVC 293
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG-------ARKVVLATNIAETSLT 412
L + +L++ P+Y P E + +F P E R+VVL T+ E+ +
Sbjct: 294 QEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIW 349
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+K+VID G + + YNPR SL++ PIS++ A R G + GK F LYT
Sbjct: 350 SHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 409
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL 532
KDM E+Q NL ++VL +K + I L DF++ P E+L++ALE L L+AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 533 NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
+ G L++ G M+EFPLDP LSK I+AS + C DE++TIAAM++ + + P +
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYST-------QWCYENYIQVRSMKRARDI 645
A F L GDH L+ VYN++++ ++ WC++ ++ +++ A I
Sbjct: 530 AAVTCWKTF-LHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVI 588
Query: 646 RDQLEGLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQR 699
R +L +++R+E+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q
Sbjct: 589 RAELLEIIKRIELPYAEPAFGSKENGLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQV 647
Query: 700 VHIHP--SSGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+HP S + + +P WV++H+ ++ Y+R + + PE +++ P YY
Sbjct: 648 AQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 380/651 (58%), Gaps = 33/651 (5%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHE---AGYTKQGKVG 179
L +ER+ LPI+ + ++ + + Q++++ G+ GK+ Q+PQ+ E + + + G V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 180 CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQ + + +A RV+ EM V +GHEVGY I FE+C + +TIL+Y TD ML RE++S P
Sbjct: 115 CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNP 174
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
L SY V+++D+ HER+++TD+L GLLKD++ R +LKL+I+S+ K + Y+G+ P+
Sbjct: 175 FLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPV 234
Query: 300 FKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILVFLTGQEEIETADEILK 359
++ ++PVE+ Y + D ++ + + +IH + GDI+VFL +++IE E +
Sbjct: 235 IEV-KNKHPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETV- 292
Query: 360 HRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEG-------ARKVVLATNIAETSLT 412
++ L + EL++ P+Y P E + +F+P E R+VVL T+ E +
Sbjct: 293 YQGSNLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIW 348
Query: 413 IDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHN 472
+ +++VID G + K YNPR SL++ PIS++ A R G + GK F LYT
Sbjct: 349 SNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEF 408
Query: 473 YHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSAL 532
KDM E+Q NL ++VL +K + I L + DF++ P E+L++ALE L L+AL
Sbjct: 409 ASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAAL 468
Query: 533 NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQV 592
+ G L++ G M+EFPLDP LSK I+AS + C DE++TIAAM++ N + P +
Sbjct: 469 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEE 528
Query: 593 HADNARMNFHLGNVGDHIALLRVYNSWRECNYST-------QWCYENYIQVRSMKRARDI 645
A F L GDH L+ +Y ++++ ++ +WC + ++ +++ A I
Sbjct: 529 AALTCWKTF-LHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVI 587
Query: 646 RDQLEGLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQR 699
R +L +++R+E+ S N L+ IKKA+ SG+F A+ + +G+Y + H Q
Sbjct: 588 RAELLEIIKRIELPYAEPAFGSKENTLN-IKKALLSGYFMQIARDVDGSGNYLMLTHKQV 646
Query: 700 VHIHPSSG--LAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
+HP SG + + +P WV++H+ ++ Y+R +E+ PE +++ P YY
Sbjct: 647 AQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/683 (34%), Positives = 384/683 (56%), Gaps = 31/683 (4%)
Query: 90 IDFIRDSVIDGENLDELHSELPDKSKEKSALEMLQEERKTLPIYPYRDELLQAVNEYQVL 149
+D S ++G+ L++L D S L +ER+TLPI+ + + L+ + Q++
Sbjct: 24 LDVTDSSDVEGDELNDLELNPFDGLPYSSRFYKLLKERETLPIWKIKYDFLEHLAHNQIV 83
Query: 150 VIVGETGSGKTTQIPQYLHE---AGYTKQGKVGCTQPRRVAAMSVAARVSQEMGVKLGHE 206
V+ SGK++QIPQ+ E AG+ + G V CTQ + A+ +A RV+ EM V +GHE
Sbjct: 84 VVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVVCTQAHKQTAVWLAMRVADEMDVNIGHE 143
Query: 207 VGYSIRFEDCTSEKTILKYMTDGMLLREILSEPNLESYSVLMVDEAHERTLSTDILFGLL 266
VGY + FE+C + +TIL+Y TD ML RE++S P L SY V+++D+ +ER +STD+L L
Sbjct: 144 VGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFL 203
Query: 267 KDLIKFRSDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAI 326
K + R +LK++I + + Y+G+AP+ + + VE YT + DY +A+
Sbjct: 204 KVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVEAEN-THSVESVYTTSLPRDYFHSAL 262
Query: 327 VTVLQIHVTQSPGDILVFLTGQEEIETADEILKHRTRGLGSKIAELIICPIYAN------ 380
+ +IH T+ GDI+VFL +EEI+ A E +K + ++ EL+ +Y +
Sbjct: 263 RLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIKQEALHMNPELGELMPIALYPHQSISDY 322
Query: 381 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFSKVKSYNPRTGMESLL 440
+P E ++ + + RKVVL T++ E+ + + I +VID G K K YN R ESL+
Sbjct: 323 IPYE---ELDDNSKNPKRKVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLV 379
Query: 441 VHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDDNTVPEIQRTNLANVVLILKSL 500
PISK A R + GK F LY ++ +M +++ NL ++VL LK +
Sbjct: 380 TQPISKVRAKMRKHILSSSSEGKLFCLYP-EDFAHEMKPFLTAKVEECNLISMVLFLKRM 438
Query: 501 GIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVA 560
I L + DFI+ P E+L++ALE L L+AL+ G L++ G M+EFPLDP LSK I+A
Sbjct: 439 DIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILA 498
Query: 561 SDKDKCSDEIITIAAMLSVGNS-IFYRPKDKQVHADNARMNFHLGNVGDHIALLRVYNSW 619
+ + C DE++T+AAM++ N I P+ K++ FH GDH L+ +YN +
Sbjct: 499 ACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIGKGKFFH--PEGDHFTLINIYNEY 556
Query: 620 REC--NYSTQ-----WCYENYIQVRSMKRARDIRDQLEGLLERVEIEVT----SNLNDLD 668
+ N ++Q WC + + +++ AR IR++L ++ R+E+ +T + ++
Sbjct: 557 EQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLDIMRRIELPLTGPAFGSDENVT 616
Query: 669 AIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTT 725
IKK++ SG+F A+ + G+Y + H Q +HP SG +P WV++HE ++
Sbjct: 617 NIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQLHPDSGFCNSAKVPEWVLFHEFSVSE 676
Query: 726 KEYMRQVTELKPEWLVEIAPHYY 748
+ +R V+E+ P +E P YY
Sbjct: 677 RSCIRIVSEISPNLFMEFVPPYY 699
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/736 (33%), Positives = 377/736 (51%), Gaps = 121/736 (16%)
Query: 123 LQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYT-----KQGK 177
+QE R LPI +++ + V++I G TGSGKTTQ+PQ+L EAG++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 178 VGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
+ TQPRRVAA+S+A RVS+E+ +V Y IRF+ + T +K+MTDG+LLRE+ S
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSD----------LKLLISSATLDA 287
+ L +YS ++VDEAHER+++TDIL GLL +++ R + LKL+I SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 288 EKFSD----YFGSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSPGDILV 343
FS+ + PI KI R+YPV IH+ + + DY+ A V IH G ILV
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 344 FLTGQEEIETADEILKHR----TRGLGSKIAELI-------------------------- 373
FLTGQ+E+E ++L+ R R L S+ ++
Sbjct: 630 FLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSS 689
Query: 374 --------------ICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 419
+ P+Y+ L TE Q K+F+ +PEG R ++ATN+AETS+TI I+YV
Sbjct: 690 SSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYV 749
Query: 420 IDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLHNYHKDMDD 479
+D G +K + YN +T ++ V ISKA+A QRAGR+GRTGPG C+RLY+ +
Sbjct: 750 VDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPL 809
Query: 480 NTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSALNKLGELT 539
+++PEI RT + ++VL +K++ ID++ NF F P L K+L+LL L A++ G LT
Sbjct: 810 HSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLT 869
Query: 540 KVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVG------NSIFYRPKDKQVH 593
K+G +M+ FPL P SKM++ + C +I + + LS+ S+ Y DK
Sbjct: 870 KLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSR 929
Query: 594 ADNA----------------RMNFHLGNV---------GDHIALLRVYNSWRECNYSTQW 628
++ RM + + ++LL ++ + ++
Sbjct: 930 SEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKF 989
Query: 629 CYENYIQVRSMKRARDIRDQLEGLLERVEIEVTSNLNDLD----------AIKKAITSGF 678
C ENY++ ++++ ++R Q+ GLL+R + V L A+++ I S +
Sbjct: 990 CKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKALRQFIASAY 1049
Query: 679 FPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLP--------RWVVYHEL--VLTTKEY 728
A K + P S + Q +P +VVY L + + Y
Sbjct: 1050 IDQVALYDKEKRGYVTLFPS------GSEVVQFVPDRTYNIDSEYVVYLSLHESRSGRVY 1103
Query: 729 MRQVTELKPEWLVEIA 744
M +TE+ PE L +A
Sbjct: 1104 MSPLTEISPEHLARLA 1119
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 318/552 (57%), Gaps = 28/552 (5%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 154 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 210
Query: 180 CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQPRR+A +S+A RV E + G +VGY IRFE S T + ++T G+LLR+I EP
Sbjct: 211 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREP 270
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YF AP+
Sbjct: 271 SLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPV 330
Query: 300 FKIPGRRYPVEIHY------TKAPEADYIDA-AIVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y A +++ +D + VL+ + P GD+LVFL+G
Sbjct: 331 VQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGM 390
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI T + + S ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 391 AEITTVLDA----AQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAE 446
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG C+RLY
Sbjct: 447 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLY 506
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFA 528
+Y VPEI+R L +VL +KS+ + D F FI+PPP ++ A+ L
Sbjct: 507 AESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQE 565
Query: 529 LSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
AL+ LT +G +A+ P+D ++ KM++ ++ ++TIAA LSV S F R
Sbjct: 566 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSA 624
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSW------RECNYSTQWCYENYIQVRSMKRA 642
+ AR + GD L V+N+W R N S +WC ++ +
Sbjct: 625 QSNLDCATARRPLE-SDQGDPFTLFNVFNAWVQVKSERSGN-SRKWCRRRGVEEHRLYEM 682
Query: 643 RDIRDQLEGLLE 654
++R Q + LLE
Sbjct: 683 ANLRRQFKELLE 694
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 315/551 (57%), Gaps = 26/551 (4%)
Query: 120 LEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKVG 179
L LQ ER LPI Y + +LQ + E+QV+V+ G+TG GK+TQ+PQYL AG++ V
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VA 208
Query: 180 CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILSEP 239
CTQPRR+A +S+A RV E + G +VGY IRFE S T + ++T G+LLR+I EP
Sbjct: 209 CTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREP 268
Query: 240 NLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSAPI 299
+L Y VL+VDE HER L D L G+L+ L+ R DLK+++ SAT++ FS YF +AP+
Sbjct: 269 SLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPV 328
Query: 300 FKIPGRRYPVEIHYT------KAPEADYIDA-AIVTVLQIHVTQSP----GDILVFLTGQ 348
++PGR +P+ + Y +++ +D + VL+ + P GD+LVFL+G
Sbjct: 329 VQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGM 388
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
EI E + S ++ P+++ L Q K+F+ P G RK +L+TNIAE
Sbjct: 389 AEISAVLEA----AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAE 444
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TS+TIDGI++V+D G K SY+P+ ++ L IS+ASA QR GR+GRTGPG CFRLY
Sbjct: 445 TSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 504
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFA 528
+Y VPEI+R L ++VL +KS+ + D F FI+PPP +L A+ L
Sbjct: 505 AESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRD 563
Query: 529 LSALNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPK 588
AL+ LT +G +A+ P+D ++ KM++ + ++TIAA LSV S F R
Sbjct: 564 QGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSA 622
Query: 589 DKQVHADNARMNFHLGNVGDHIALLRVYNSWRECNY-----STQWCYENYIQVRSMKRAR 643
AR + GD L V+N+W + S +WC I+ +
Sbjct: 623 QSSPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMA 681
Query: 644 DIRDQLEGLLE 654
++R Q + LLE
Sbjct: 682 NLRRQFKELLE 692
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 242/661 (36%), Positives = 363/661 (54%), Gaps = 53/661 (8%)
Query: 122 MLQEERKT---LPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQGKV 178
+L+E R+ LPIY YR ++L+ ++ Q++V++GETGSGK+TQ+ Q+L ++G +
Sbjct: 292 ILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESI 351
Query: 179 GCTQPRRVAAMSVAARVSQEM-GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
CTQPR++AAM++ RV +E G + V + F + + YMTD LL+ +
Sbjct: 352 VCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMK 411
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKDLIKFRSDLKLLISSATLDAEKFSDYFGSA 297
+ +L S +++DEAHER+L+TD+L LL+ L+ R DL+L+I SAT DA + S Y
Sbjct: 412 DRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDC 471
Query: 298 PIFKIPGRRYPVEIHYTKAPE---------ADYIDAAIVTVLQIHVTQSPGDILVFLTGQ 348
I + GR +PVEI Y+ + A Y + ++IH T+ G IL FLT Q
Sbjct: 472 GILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQ 531
Query: 349 EEIETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAE 408
E+E A E R + L P++ L E Q +F+ P G RKV+ ATNIAE
Sbjct: 532 AEVEWACE------RFVAPSAIAL---PLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAE 581
Query: 409 TSLTIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLY 468
TSLTI G+KYVID G K Y PRTGM L V +S++SA QRAGR+GRT PG+C+RLY
Sbjct: 582 TSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLY 641
Query: 469 TLHNYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFA 528
+ ++ M+ N PEI+R +L +L + +LGID++ F+F+D P EA+ A++ L
Sbjct: 642 SKTDF-DSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQ 700
Query: 529 LSAL---NKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFY 585
L A+ N + ELT+ G + + L+P L K+I+ + + E I +AA+++ +SIF
Sbjct: 701 LGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFC 760
Query: 586 RPK--DKQVHADNARMNFHLGNVGDHIALLRVYNSWREC--NYSTQWCYENYIQVRSMKR 641
R D ++ AD ++ F N GD LL VY W + +WC+EN + +SM+R
Sbjct: 761 RVGNFDDKMKADRLKVQFCNDN-GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRR 819
Query: 642 ARDIRDQLEGLLERVEIEVTS------NLNDLDAIKKAITSGFFPHSAKLQKNGSYWT-- 693
D +LE +ER E+ + S N N+ K + A L +N + +T
Sbjct: 820 CEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVIL---ASLAENVAMYTGY 875
Query: 694 -------VKHPQRVHIHPSSGLAQV--LPRWVVYHELVLTTKEYMRQVTELKPEWLVEIA 744
Q+V +HPS L P WVV+ EL+ +Y+ VT E L +
Sbjct: 876 DQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLD 935
Query: 745 P 745
P
Sbjct: 936 P 936
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 357/650 (54%), Gaps = 33/650 (5%)
Query: 123 LQEERKTLPIYPYRDELLQAV--NEYQVLVIVGETGSGKTTQIPQYLHEAGYTK---QGK 177
L E+R+ LPI+ R L+ + + V+++ G+ GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 178 VGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREILS 237
V TQP +AAMS+A+RV+ EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 238 EPNLESYSVLMVDEAHERTLSTDILFGLLKD--LIKFRSDLKLLISSATLDAEKFSDYFG 295
++SVL++DEA ER++++D+L GLL+D L D ++++ + KF ++G
Sbjct: 155 TRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWG 214
Query: 296 SAPIFKIPGRRYP---VEIHYTKAPEADYIDAAIVTVLQI-HVTQSPGDILVFLTGQEEI 351
++PI ++P R P + Y D ++AA VL++ ++PGD+LV+L +EEI
Sbjct: 215 NSPIVRVP--REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEI 272
Query: 352 ETADEILKHRTRGLGSKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSL 411
E L L + P++ +Q ++E T RK+V+ +A+ S
Sbjct: 273 SLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQ-TVYEDTDVSVRKIVVTHWLADFSF 331
Query: 412 TIDGIKYVIDPGFSKVKSYNPRTGMESLLVHPISKASAMQRAGRSGRTGPGKCFRLYTLH 471
++ I++VID G YNPR ES ++ PISK A R R+ PG C RLY+
Sbjct: 332 SLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKS 391
Query: 472 NYHKDMDDNTVPEIQRTNLANVVLILKSLGIDDLVNFDFIDPPPEEALLKALELLFALSA 531
+ P++ NL+++VL+L I + F+D P EAL++ALE L L+A
Sbjct: 392 TLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAA 451
Query: 532 LNKLGELTKVGRRMAEFPLDPMLSKMIVASDKDKCSDEIITIAAMLSVGNSIFYRPKDKQ 591
LN GEL+ +G ++EFPL P L+K ++AS + C DE++T+AAML+ F RP
Sbjct: 452 LNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP--- 507
Query: 592 VHADNARMNFHLGNV-GDHIALLRVYNSWRECNYSTQWCYENYIQVRSMKRARDIRDQLE 650
+ A A + L + GDH +L++VY ++ + WC + S+ +AR +R +L
Sbjct: 508 LSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELV 567
Query: 651 GLLERVEIEVT-----SNLNDLDAIKKAITSGFFPHSAK-LQKNGSYWTVKHPQRVHIHP 704
L++R+E+ ++ S N D ++KA+ SG+F A+ G+Y + H + P
Sbjct: 568 ELMQRIELPLSQPAFGSEQNRRD-LQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSP 626
Query: 705 SSGL------AQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYY 748
AQ P WV+YH ++ + V+E++PE LVE+AP Y+
Sbjct: 627 YCSYRNRRTPAQP-PTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF 675
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,508,901
Number of Sequences: 539616
Number of extensions: 11853777
Number of successful extensions: 40508
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 39615
Number of HSP's gapped (non-prelim): 384
length of query: 755
length of database: 191,569,459
effective HSP length: 125
effective length of query: 630
effective length of database: 124,117,459
effective search space: 78193999170
effective search space used: 78193999170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)